BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006907
(626 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 400 bits (1028), Expect = e-111, Method: Compositional matrix adjust.
Identities = 195/300 (65%), Positives = 239/300 (79%), Gaps = 2/300 (0%)
Query: 274 LFTSYVQQDYEFDVGHLKRFSFRELQIATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVK 333
F ++D E +G LKRFS RELQ+A+ NFS KNILG+GG+G VYKG L + +VAVK
Sbjct: 9 FFDVPAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVK 68
Query: 334 RLKDPNFTG-EVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRD 392
RLK+ G E+QFQTEVEMI +A+HRNLLRL GFCMTP ERLLVYPYM NGSVA CLR+
Sbjct: 69 RLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRE 128
Query: 393 TRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGL 452
+++PPLDW +R IALG+ARGL YLH+ C+PKIIHRDVKAANILLDE FEAVVGDFGL
Sbjct: 129 RPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 188
Query: 453 AKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGN- 511
AKL+D +D HV AVRGT+GHIAPEYLSTG+SSEKTDVFG+GV+LLELITGQ+A D+
Sbjct: 189 AKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARL 248
Query: 512 GQVQKGMILDCVRTLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
M+LD V+ L +E++L+ L+D DL+G++ E+E+++Q+AL CTQS P RPKMS
Sbjct: 249 ANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMS 308
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 396 bits (1018), Expect = e-110, Method: Compositional matrix adjust.
Identities = 193/300 (64%), Positives = 237/300 (79%), Gaps = 2/300 (0%)
Query: 274 LFTSYVQQDYEFDVGHLKRFSFRELQIATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVK 333
F ++D E +G LKRFS RELQ+A+ NF KNILG+GG+G VYKG L + +VAVK
Sbjct: 1 FFDVPAEEDPEVHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVK 60
Query: 334 RLKDPNFTG-EVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRD 392
RLK+ G E+QFQTEVEMI +A+HRNLLRL GFCMTP ERLLVYPYM NGSVA CLR+
Sbjct: 61 RLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRE 120
Query: 393 TRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGL 452
+++PPLDW +R IALG+ARGL YLH+ C+PKIIHRDVKAANILLDE FEAVVGDFGL
Sbjct: 121 RPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 180
Query: 453 AKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGN- 511
AKL+D +D HV AVRG +GHIAPEYLSTG+SSEKTDVFG+GV+LLELITGQ+A D+
Sbjct: 181 AKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARL 240
Query: 512 GQVQKGMILDCVRTLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
M+LD V+ L +E++L+ L+D DL+G++ E+E+++Q+AL CTQS P RPKMS
Sbjct: 241 ANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMS 300
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 172 bits (436), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 115/292 (39%), Positives = 167/292 (57%), Gaps = 26/292 (8%)
Query: 293 FSFRELQIATGNFSPK------NILGQGGYGVVYKGCLPNRMVVAVKRLKD-PNFTGE-- 343
FSF EL+ T NF + N +G+GG+GVVYKG + N VAVK+L + T E
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 344 -VQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVAD---CLRDTRQAKPP 399
QF E++++ H NL+ L GF ++ LVY YMPNGS+ D CL T PP
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT----PP 129
Query: 400 LDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRR 459
L W+ R IA G A G+ +LHE + IHRD+K+ANILLDE+F A + DFGLA+ ++
Sbjct: 130 LSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKF 186
Query: 460 DSHVTTA-VRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGM 518
V + + GT ++APE L G+ + K+D++ FGV+LLE+ITG A+D + + +
Sbjct: 187 AQTVMXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVD--EHREPQLL 243
Query: 519 ILDCVRTLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKM 570
+ EE+ ++ ID+ + + D T +E M +A QC N RP +
Sbjct: 244 LDIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDI 294
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 171 bits (434), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 115/292 (39%), Positives = 166/292 (56%), Gaps = 26/292 (8%)
Query: 293 FSFRELQIATGNFSPK------NILGQGGYGVVYKGCLPNRMVVAVKRLKD-PNFTGE-- 343
FSF EL+ T NF + N +G+GG+GVVYKG + N VAVK+L + T E
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 67
Query: 344 -VQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVAD---CLRDTRQAKPP 399
QF E++++ H NL+ L GF ++ LVY YMPNGS+ D CL T PP
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT----PP 123
Query: 400 LDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRR 459
L W+ R IA G A G+ +LHE + IHRD+K+ANILLDE+F A + DFGLA+ ++
Sbjct: 124 LSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKF 180
Query: 460 DSHVTTA-VRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGM 518
V + GT ++APE L G+ + K+D++ FGV+LLE+ITG A+D + + +
Sbjct: 181 AQXVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVD--EHREPQLL 237
Query: 519 ILDCVRTLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKM 570
+ EE+ ++ ID+ + + D T +E M +A QC N RP +
Sbjct: 238 LDIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDI 288
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 171 bits (434), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 115/292 (39%), Positives = 166/292 (56%), Gaps = 26/292 (8%)
Query: 293 FSFRELQIATGNFSPK------NILGQGGYGVVYKGCLPNRMVVAVKRLKD-PNFTGE-- 343
FSF EL+ T NF + N +G+GG+GVVYKG + N VAVK+L + T E
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 344 -VQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVAD---CLRDTRQAKPP 399
QF E++++ H NL+ L GF ++ LVY YMPNGS+ D CL T PP
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT----PP 129
Query: 400 LDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRR 459
L W+ R IA G A G+ +LHE + IHRD+K+ANILLDE+F A + DFGLA+ ++
Sbjct: 130 LSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKF 186
Query: 460 DSHVTTA-VRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGM 518
V + GT ++APE L G+ + K+D++ FGV+LLE+ITG A+D + + +
Sbjct: 187 AQTVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVD--EHREPQLL 243
Query: 519 ILDCVRTLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKM 570
+ EE+ ++ ID+ + + D T +E M +A QC N RP +
Sbjct: 244 LDIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDI 294
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/280 (36%), Positives = 155/280 (55%), Gaps = 5/280 (1%)
Query: 292 RFSFRELQIATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVE 351
R +L+ AT NF K ++G G +G VYKG L + VA+KR + G +F+TE+E
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 352 MIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALG 411
+ H +L+ L GFC E +L+Y YM NG++ L + + W +R+ I +G
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 412 TARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRD-SHVTTAVRGT 470
ARGL YLH + IIHRDVK+ NILLDE+F + DFG++K D +H+ V+GT
Sbjct: 148 AARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGT 204
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEER 530
+G+I PEY G+ +EK+DV+ FGV+L E++ + A+ V + + + + H
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAI-VQSLPREMVNLAEWAVESHNNG 263
Query: 531 RLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKM 570
+L+ ++D +L P L K A++C RP M
Sbjct: 264 QLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSM 303
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/292 (38%), Positives = 161/292 (55%), Gaps = 26/292 (8%)
Query: 293 FSFRELQIATGNFSPK------NILGQGGYGVVYKGCLPNRMVVAVKRLKD-PNFTGE-- 343
FSF EL+ T NF + N G+GG+GVVYKG + N VAVK+L + T E
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 64
Query: 344 -VQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVAD---CLRDTRQAKPP 399
QF E+++ H NL+ L GF ++ LVY Y PNGS+ D CL T PP
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGT----PP 120
Query: 400 LDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRR 459
L W+ R IA G A G+ +LHE + IHRD+K+ANILLDE+F A + DFGLA+ ++
Sbjct: 121 LSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKF 177
Query: 460 DSHVTTA-VRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGM 518
V + + GT + APE L G+ + K+D++ FGV+LLE+ITG A+D + + +
Sbjct: 178 AQXVXXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVD--EHREPQLL 234
Query: 519 ILDCVRTLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKM 570
+ EE+ ++ ID+ + D T +E +A QC N RP +
Sbjct: 235 LDIKEEIEDEEKTIEDYIDKKXNDA-DSTSVEAXYSVASQCLHEKKNKRPDI 285
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 100/280 (35%), Positives = 155/280 (55%), Gaps = 5/280 (1%)
Query: 292 RFSFRELQIATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVE 351
R +L+ AT NF K ++G G +G VYKG L + VA+KR + G +F+TE+E
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 352 MIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALG 411
+ H +L+ L GFC E +L+Y YM NG++ L + + W +R+ I +G
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 412 TARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKL-LDRRDSHVTTAVRGT 470
ARGL YLH + IIHRDVK+ NILLDE+F + DFG++K + +H+ V+GT
Sbjct: 148 AARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGT 204
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEER 530
+G+I PEY G+ +EK+DV+ FGV+L E++ + A+ V + + + + H
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAI-VQSLPREMVNLAEWAVESHNNG 263
Query: 531 RLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKM 570
+L+ ++D +L P L K A++C RP M
Sbjct: 264 QLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSM 303
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 120/231 (51%), Gaps = 7/231 (3%)
Query: 297 ELQIATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEV--QFQTEVEMIG 354
++ I + + K +G G +G V++ + VAVK L + +F E +F EV ++
Sbjct: 31 DMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMK 89
Query: 355 LALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTAR 414
H N++ G P +V Y+ GS+ L + A+ LD RR+ +A A+
Sbjct: 90 RLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKS-GAREQLDERRRLSMAYDVAK 148
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHI 474
G+ YLH + NP I+HRD+K+ N+L+D+ + V DFGL++ L + GT +
Sbjct: 149 GMNYLHNR-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSR-LKASXFLXSKXAAGTPEWM 206
Query: 475 APEYLSTGQSSEKTDVFGFGVLLLELITGQKAL-DVGNGQVQKGMILDCVR 524
APE L S+EK+DV+ FGV+L EL T Q+ ++ QV + C R
Sbjct: 207 APEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKR 257
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 125/232 (53%), Gaps = 9/232 (3%)
Query: 297 ELQIATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEV--QFQTEVEMIG 354
++ I + + K +G G +G V++ + VAVK L + +F E +F EV ++
Sbjct: 31 DMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMK 89
Query: 355 LALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTAR 414
H N++ G P +V Y+ GS+ L + A+ LD RR+ +A A+
Sbjct: 90 RLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKS-GAREQLDERRRLSMAYDVAK 148
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTT-AVRGTVGH 473
G+ YLH + NP I+HR++K+ N+L+D+ + V DFGL++L + + +++ + GT
Sbjct: 149 GMNYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAGTPEW 205
Query: 474 IAPEYLSTGQSSEKTDVFGFGVLLLELITGQKAL-DVGNGQVQKGMILDCVR 524
+APE L S+EK+DV+ FGV+L EL T Q+ ++ QV + C R
Sbjct: 206 MAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKR 257
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 104/192 (54%), Gaps = 7/192 (3%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMT 370
LG G +G V+ G VAVK LK + + + F E ++ H+ L+RLY +T
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYA-VVT 79
Query: 371 PEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHR 430
E ++ YM NGS+ D L+ K L N+ + +A A G+ ++ E+ IHR
Sbjct: 80 QEPIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYIHR 134
Query: 431 DVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 490
D++AANIL+ ++ + DFGLA+L++ + + + APE ++ G + K+DV
Sbjct: 135 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 194
Query: 491 FGFGVLLLELIT 502
+ FG+LL E++T
Sbjct: 195 WSFGILLTEIVT 206
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 104/192 (54%), Gaps = 7/192 (3%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMT 370
LG G +G V+ G VAVK LK + + + F E ++ H+ L+RLY +T
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYA-VVT 86
Query: 371 PEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHR 430
E ++ YM NGS+ D L+ K L N+ + +A A G+ ++ E+ IHR
Sbjct: 87 QEPIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYIHR 141
Query: 431 DVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 490
D++AANIL+ ++ + DFGLA+L++ + + + APE ++ G + K+DV
Sbjct: 142 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 201
Query: 491 FGFGVLLLELIT 502
+ FG+LL E++T
Sbjct: 202 WSFGILLTEIVT 213
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 104/192 (54%), Gaps = 7/192 (3%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMT 370
LG G +G V+ G VAVK LK + + + F E ++ H+ L+RLY +T
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYA-VVT 80
Query: 371 PEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHR 430
E ++ YM NGS+ D L+ K L N+ + +A A G+ ++ E+ IHR
Sbjct: 81 QEPIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYIHR 135
Query: 431 DVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 490
D++AANIL+ ++ + DFGLA+L++ + + + APE ++ G + K+DV
Sbjct: 136 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 195
Query: 491 FGFGVLLLELIT 502
+ FG+LL E++T
Sbjct: 196 WSFGILLTEIVT 207
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 104/192 (54%), Gaps = 7/192 (3%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMT 370
LG G +G V+ G VAVK LK + + + F E ++ H+ L+RLY +T
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYA-VVT 84
Query: 371 PEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHR 430
E ++ YM NGS+ D L+ K L N+ + +A A G+ ++ E+ IHR
Sbjct: 85 QEPIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYIHR 139
Query: 431 DVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 490
D++AANIL+ ++ + DFGLA+L++ + + + APE ++ G + K+DV
Sbjct: 140 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 199
Query: 491 FGFGVLLLELIT 502
+ FG+LL E++T
Sbjct: 200 WSFGILLTEIVT 211
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 104/192 (54%), Gaps = 7/192 (3%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMT 370
LG G +G V+ G VAVK LK + + + F E ++ H+ L+RLY +T
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYA-VVT 87
Query: 371 PEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHR 430
E ++ YM NGS+ D L+ K L N+ + +A A G+ ++ E+ IHR
Sbjct: 88 QEPIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYIHR 142
Query: 431 DVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 490
D++AANIL+ ++ + DFGLA+L++ + + + APE ++ G + K+DV
Sbjct: 143 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 202
Query: 491 FGFGVLLLELIT 502
+ FG+LL E++T
Sbjct: 203 WSFGILLTEIVT 214
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 104/192 (54%), Gaps = 7/192 (3%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMT 370
LG G +G V+ G VAVK LK + + + F E ++ H+ L+RLY +T
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYA-VVT 78
Query: 371 PEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHR 430
E ++ YM NGS+ D L+ K L N+ + +A A G+ ++ E+ IHR
Sbjct: 79 QEPIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYIHR 133
Query: 431 DVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 490
D++AANIL+ ++ + DFGLA+L++ + + + APE ++ G + K+DV
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 193
Query: 491 FGFGVLLLELIT 502
+ FG+LL E++T
Sbjct: 194 WSFGILLTEIVT 205
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 104/192 (54%), Gaps = 7/192 (3%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMT 370
LG G +G V+ G VAVK LK + + + F E ++ H+ L+RLY +T
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYA-VVT 78
Query: 371 PEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHR 430
E ++ YM NGS+ D L+ K L N+ + +A A G+ ++ E+ IHR
Sbjct: 79 QEPIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYIHR 133
Query: 431 DVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 490
D++AANIL+ ++ + DFGLA+L++ + + + APE ++ G + K+DV
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 193
Query: 491 FGFGVLLLELIT 502
+ FG+LL E++T
Sbjct: 194 WSFGILLTEIVT 205
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 104/192 (54%), Gaps = 7/192 (3%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMT 370
LG G +G V+ G VAVK LK + + + F E ++ H+ L+RLY +T
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYA-VVT 88
Query: 371 PEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHR 430
E ++ YM NGS+ D L+ K L N+ + +A A G+ ++ E+ IHR
Sbjct: 89 QEPIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYIHR 143
Query: 431 DVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 490
D++AANIL+ ++ + DFGLA+L++ + + + APE ++ G + K+DV
Sbjct: 144 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 203
Query: 491 FGFGVLLLELIT 502
+ FG+LL E++T
Sbjct: 204 WSFGILLTEIVT 215
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 104/192 (54%), Gaps = 7/192 (3%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMT 370
LG G +G V+ G VAVK LK + + + F E ++ H+ L+RLY +T
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYA-VVT 83
Query: 371 PEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHR 430
E ++ YM NGS+ D L+ K L N+ + +A A G+ ++ E+ IHR
Sbjct: 84 QEPIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYIHR 138
Query: 431 DVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 490
D++AANIL+ ++ + DFGLA+L++ + + + APE ++ G + K+DV
Sbjct: 139 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 198
Query: 491 FGFGVLLLELIT 502
+ FG+LL E++T
Sbjct: 199 WSFGILLTEIVT 210
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 104/192 (54%), Gaps = 7/192 (3%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMT 370
LG G +G V+ G VAVK LK + + + F E ++ H+ L+RLY +T
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYA-VVT 84
Query: 371 PEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHR 430
E ++ YM NGS+ D L+ K L N+ + +A A G+ ++ E+ IHR
Sbjct: 85 QEPIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYIHR 139
Query: 431 DVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 490
D++AANIL+ ++ + DFGLA+L++ + + + APE ++ G + K+DV
Sbjct: 140 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 199
Query: 491 FGFGVLLLELIT 502
+ FG+LL E++T
Sbjct: 200 WSFGILLTEIVT 211
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 104/192 (54%), Gaps = 7/192 (3%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMT 370
LG G +G V+ G VAVK LK + + + F E ++ H+ L+RLY +T
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYA-VVT 78
Query: 371 PEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHR 430
E ++ YM NGS+ D L+ K L N+ + +A A G+ ++ E+ IHR
Sbjct: 79 QEPIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYIHR 133
Query: 431 DVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 490
D++AANIL+ ++ + DFGLA+L++ + + + APE ++ G + K+DV
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 193
Query: 491 FGFGVLLLELIT 502
+ FG+LL E++T
Sbjct: 194 WSFGILLTEIVT 205
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 104/192 (54%), Gaps = 7/192 (3%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMT 370
LG G +G V+ G VAVK LK + + + F E ++ H+ L+RLY +T
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYA-VVT 73
Query: 371 PEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHR 430
E ++ YM NGS+ D L+ K L N+ + +A A G+ ++ E+ IHR
Sbjct: 74 QEPIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYIHR 128
Query: 431 DVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 490
D++AANIL+ ++ + DFGLA+L++ + + + APE ++ G + K+DV
Sbjct: 129 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 188
Query: 491 FGFGVLLLELIT 502
+ FG+LL E++T
Sbjct: 189 WSFGILLTEIVT 200
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 103/192 (53%), Gaps = 7/192 (3%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMT 370
LG G G V+ G VAVK LK + + + F E ++ H+ L+RLY +T
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYA-VVT 78
Query: 371 PEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHR 430
E ++ YM NGS+ D L+ K L N+ + +A A G+ ++ E+ IHR
Sbjct: 79 QEPIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYIHR 133
Query: 431 DVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 490
D++AANIL+ ++ + DFGLA+L++ + + + APE ++ G + K+DV
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 193
Query: 491 FGFGVLLLELIT 502
+ FG+LL E++T
Sbjct: 194 WSFGILLTEIVT 205
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 104/192 (54%), Gaps = 7/192 (3%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMT 370
LG G +G V+ G VAVK LK + + + F E ++ H+ L+RLY +T
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYA-VVT 74
Query: 371 PEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHR 430
E ++ YM NGS+ D L+ K L N+ + +A A G+ ++ E+ IHR
Sbjct: 75 QEPIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYIHR 129
Query: 431 DVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 490
+++AANIL+ ++ + DFGLA+L++ + + + APE ++ G + K+DV
Sbjct: 130 NLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 189
Query: 491 FGFGVLLLELIT 502
+ FG+LL E++T
Sbjct: 190 WSFGILLTEIVT 201
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/271 (32%), Positives = 132/271 (48%), Gaps = 31/271 (11%)
Query: 310 ILGQGGYGVVYKGCLPN----RMVVAVKRLKDPNFTGEV-QFQTEVEMIGLALHRNLLRL 364
++G+G +G VY G L + ++ AVK L GEV QF TE ++ H N+L L
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 365 YGFCMTPE-ERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQC 423
G C+ E L+V PYM +G + + +R+ D + L A+G+ +L
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFL---A 151
Query: 424 NPKIIHRDVKAANILLDESFEAVVGDFGLAK-LLDRR-DS-HVTTAVRGTVGHIAPEYLS 480
+ K +HRD+ A N +LDE F V DFGLA+ +LD+ DS H T + V +A E L
Sbjct: 152 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQ 211
Query: 481 TGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDRDL 540
T + + K+DV+ FGVLL EL+T G D L + RRL L
Sbjct: 212 TQKFTTKSDVWSFGVLLWELMTR------GAPPYPDVNTFDITVYLLQGRRL-------L 258
Query: 541 KGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
+ + P + + ++ L+C +RP S
Sbjct: 259 QPEYCP---DPLYEVMLKCWHPKAEMRPSFS 286
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 129/271 (47%), Gaps = 31/271 (11%)
Query: 310 ILGQGGYGVVYKGCLPN----RMVVAVKRLKDPNFTGEV-QFQTEVEMIGLALHRNLLRL 364
++G+G +G VY G L + ++ AVK L GEV QF TE ++ H N+L L
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 365 YGFCMTPE-ERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQC 423
G C+ E L+V PYM +G + + +R+ D + L A+G+ YL
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL---A 149
Query: 424 NPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDS---HVTTAVRGTVGHIAPEYLS 480
+ K +HRD+ A N +LDE F V DFGLA+ + ++ H T + V +A E L
Sbjct: 150 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQ 209
Query: 481 TGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDRDL 540
T + + K+DV+ FGVLL EL+T G D L + RRL L
Sbjct: 210 TQKFTTKSDVWSFGVLLWELMTR------GAPPYPDVNTFDITVYLLQGRRL-------L 256
Query: 541 KGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
+ + P + + ++ L+C +RP S
Sbjct: 257 QPEYCP---DPLYEVMLKCWHPKAEMRPSFS 284
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/271 (31%), Positives = 129/271 (47%), Gaps = 31/271 (11%)
Query: 310 ILGQGGYGVVYKGCLPN----RMVVAVKRLKDPNFTGEV-QFQTEVEMIGLALHRNLLRL 364
++G+G +G VY G L + ++ AVK L GEV QF TE ++ H N+L L
Sbjct: 56 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 115
Query: 365 YGFCMTPE-ERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQC 423
G C+ E L+V PYM +G + + +R+ D + L A+G+ YL +
Sbjct: 116 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYLASK- 171
Query: 424 NPKIIHRDVKAANILLDESFEAVVGDFGLAK-LLDRR--DSHVTTAVRGTVGHIAPEYLS 480
K +HRD+ A N +LDE F V DFGLA+ + D+ H T + V +A E L
Sbjct: 172 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 229
Query: 481 TGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDRDL 540
T + + K+DV+ FGVLL EL+T G D L + RRL L
Sbjct: 230 TQKFTTKSDVWSFGVLLWELMTR------GAPPYPDVNTFDITVYLLQGRRL-------L 276
Query: 541 KGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
+ + P + + ++ L+C +RP S
Sbjct: 277 QPEYCP---DPLYEVMLKCWHPKAEMRPSFS 304
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/271 (31%), Positives = 129/271 (47%), Gaps = 31/271 (11%)
Query: 310 ILGQGGYGVVYKGCLPN----RMVVAVKRLKDPNFTGEV-QFQTEVEMIGLALHRNLLRL 364
++G+G +G VY G L + ++ AVK L GEV QF TE ++ H N+L L
Sbjct: 55 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 114
Query: 365 YGFCMTPE-ERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQC 423
G C+ E L+V PYM +G + + +R+ D + L A+G+ YL +
Sbjct: 115 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYLASK- 170
Query: 424 NPKIIHRDVKAANILLDESFEAVVGDFGLAK-LLDRR--DSHVTTAVRGTVGHIAPEYLS 480
K +HRD+ A N +LDE F V DFGLA+ + D+ H T + V +A E L
Sbjct: 171 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 228
Query: 481 TGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDRDL 540
T + + K+DV+ FGVLL EL+T G D L + RRL L
Sbjct: 229 TQKFTTKSDVWSFGVLLWELMTR------GAPPYPDVNTFDITVYLLQGRRL-------L 275
Query: 541 KGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
+ + P + + ++ L+C +RP S
Sbjct: 276 QPEYCP---DPLYEVMLKCWHPKAEMRPSFS 303
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/271 (31%), Positives = 129/271 (47%), Gaps = 31/271 (11%)
Query: 310 ILGQGGYGVVYKGCLPN----RMVVAVKRLKDPNFTGEV-QFQTEVEMIGLALHRNLLRL 364
++G+G +G VY G L + ++ AVK L GEV QF TE ++ H N+L L
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 365 YGFCMTPE-ERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQC 423
G C+ E L+V PYM +G + + +R+ D + L A+G+ YL
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL---A 148
Query: 424 NPKIIHRDVKAANILLDESFEAVVGDFGLAK-LLDRR--DSHVTTAVRGTVGHIAPEYLS 480
+ K +HRD+ A N +LDE F V DFGLA+ + D+ H T + V +A E L
Sbjct: 149 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 208
Query: 481 TGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDRDL 540
T + + K+DV+ FGVLL EL+T G D L + RRL L
Sbjct: 209 TQKFTTKSDVWSFGVLLWELMTR------GAPPYPDVNTFDITVYLLQGRRL-------L 255
Query: 541 KGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
+ + P + + ++ L+C +RP S
Sbjct: 256 QPEYCP---DPLYEVMLKCWHPKAEMRPSFS 283
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/271 (31%), Positives = 129/271 (47%), Gaps = 31/271 (11%)
Query: 310 ILGQGGYGVVYKGCLPN----RMVVAVKRLKDPNFTGEV-QFQTEVEMIGLALHRNLLRL 364
++G+G +G VY G L + ++ AVK L GEV QF TE ++ H N+L L
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 365 YGFCMTPE-ERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQC 423
G C+ E L+V PYM +G + + +R+ D + L A+G+ YL
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL---A 149
Query: 424 NPKIIHRDVKAANILLDESFEAVVGDFGLAK-LLDRR--DSHVTTAVRGTVGHIAPEYLS 480
+ K +HRD+ A N +LDE F V DFGLA+ + D+ H T + V +A E L
Sbjct: 150 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 209
Query: 481 TGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDRDL 540
T + + K+DV+ FGVLL EL+T G D L + RRL L
Sbjct: 210 TQKFTTKSDVWSFGVLLWELMTR------GAPPYPDVNTFDITVYLLQGRRL-------L 256
Query: 541 KGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
+ + P + + ++ L+C +RP S
Sbjct: 257 QPEYCP---DPLYEVMLKCWHPKAEMRPSFS 284
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/271 (31%), Positives = 129/271 (47%), Gaps = 31/271 (11%)
Query: 310 ILGQGGYGVVYKGCLPN----RMVVAVKRLKDPNFTGEV-QFQTEVEMIGLALHRNLLRL 364
++G+G +G VY G L + ++ AVK L GEV QF TE ++ H N+L L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 365 YGFCMTPE-ERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQC 423
G C+ E L+V PYM +G + + +R+ D + L A+G+ YL
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL---A 150
Query: 424 NPKIIHRDVKAANILLDESFEAVVGDFGLAK-LLDRR--DSHVTTAVRGTVGHIAPEYLS 480
+ K +HRD+ A N +LDE F V DFGLA+ + D+ H T + V +A E L
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 210
Query: 481 TGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDRDL 540
T + + K+DV+ FGVLL EL+T G D L + RRL L
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMTR------GAPPYPDVNTFDITVYLLQGRRL-------L 257
Query: 541 KGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
+ + P + + ++ L+C +RP S
Sbjct: 258 QPEYCP---DPLYEVMLKCWHPKAEMRPSFS 285
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/271 (31%), Positives = 129/271 (47%), Gaps = 31/271 (11%)
Query: 310 ILGQGGYGVVYKGCLPN----RMVVAVKRLKDPNFTGEV-QFQTEVEMIGLALHRNLLRL 364
++G+G +G VY G L + ++ AVK L GEV QF TE ++ H N+L L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 365 YGFCMTPE-ERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQC 423
G C+ E L+V PYM +G + + +R+ D + L A+G+ YL
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL---A 150
Query: 424 NPKIIHRDVKAANILLDESFEAVVGDFGLAK-LLDRR--DSHVTTAVRGTVGHIAPEYLS 480
+ K +HRD+ A N +LDE F V DFGLA+ + D+ H T + V +A E L
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 210
Query: 481 TGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDRDL 540
T + + K+DV+ FGVLL EL+T G D L + RRL L
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMTR------GAPPYPDVNTFDITVYLLQGRRL-------L 257
Query: 541 KGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
+ + P + + ++ L+C +RP S
Sbjct: 258 QPEYCP---DPLYEVMLKCWHPKAEMRPSFS 285
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/271 (31%), Positives = 129/271 (47%), Gaps = 31/271 (11%)
Query: 310 ILGQGGYGVVYKGCLPN----RMVVAVKRLKDPNFTGEV-QFQTEVEMIGLALHRNLLRL 364
++G+G +G VY G L + ++ AVK L GEV QF TE ++ H N+L L
Sbjct: 29 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 88
Query: 365 YGFCMTPE-ERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQC 423
G C+ E L+V PYM +G + + +R+ D + L A+G+ YL +
Sbjct: 89 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYLASK- 144
Query: 424 NPKIIHRDVKAANILLDESFEAVVGDFGLAK-LLDRR--DSHVTTAVRGTVGHIAPEYLS 480
K +HRD+ A N +LDE F V DFGLA+ + D+ H T + V +A E L
Sbjct: 145 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 202
Query: 481 TGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDRDL 540
T + + K+DV+ FGVLL EL+T G D L + RRL L
Sbjct: 203 TQKFTTKSDVWSFGVLLWELMTR------GAPPYPDVNTFDITVYLLQGRRL-------L 249
Query: 541 KGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
+ + P + + ++ L+C +RP S
Sbjct: 250 QPEYCP---DPLYEVMLKCWHPKAEMRPSFS 277
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/271 (31%), Positives = 129/271 (47%), Gaps = 31/271 (11%)
Query: 310 ILGQGGYGVVYKGCLPN----RMVVAVKRLKDPNFTGEV-QFQTEVEMIGLALHRNLLRL 364
++G+G +G VY G L + ++ AVK L GEV QF TE ++ H N+L L
Sbjct: 34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 93
Query: 365 YGFCMTPE-ERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQC 423
G C+ E L+V PYM +G + + +R+ D + L A+G+ YL
Sbjct: 94 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL---A 147
Query: 424 NPKIIHRDVKAANILLDESFEAVVGDFGLAK-LLDRR--DSHVTTAVRGTVGHIAPEYLS 480
+ K +HRD+ A N +LDE F V DFGLA+ + D+ H T + V +A E L
Sbjct: 148 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 207
Query: 481 TGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDRDL 540
T + + K+DV+ FGVLL EL+T G D L + RRL L
Sbjct: 208 TQKFTTKSDVWSFGVLLWELMTR------GAPPYPDVNTFDITVYLLQGRRL-------L 254
Query: 541 KGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
+ + P + + ++ L+C +RP S
Sbjct: 255 QPEYCP---DPLYEVMLKCWHPKAEMRPSFS 282
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/271 (31%), Positives = 129/271 (47%), Gaps = 31/271 (11%)
Query: 310 ILGQGGYGVVYKGCLPN----RMVVAVKRLKDPNFTGEV-QFQTEVEMIGLALHRNLLRL 364
++G+G +G VY G L + ++ AVK L GEV QF TE ++ H N+L L
Sbjct: 32 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 91
Query: 365 YGFCMTPE-ERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQC 423
G C+ E L+V PYM +G + + +R+ D + L A+G+ YL
Sbjct: 92 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL---A 145
Query: 424 NPKIIHRDVKAANILLDESFEAVVGDFGLAK-LLDRR--DSHVTTAVRGTVGHIAPEYLS 480
+ K +HRD+ A N +LDE F V DFGLA+ + D+ H T + V +A E L
Sbjct: 146 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 205
Query: 481 TGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDRDL 540
T + + K+DV+ FGVLL EL+T G D L + RRL L
Sbjct: 206 TQKFTTKSDVWSFGVLLWELMTR------GAPPYPDVNTFDITVYLLQGRRL-------L 252
Query: 541 KGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
+ + P + + ++ L+C +RP S
Sbjct: 253 QPEYCP---DPLYEVMLKCWHPKAEMRPSFS 280
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 134/277 (48%), Gaps = 41/277 (14%)
Query: 311 LGQGGYGVVYKGCL-PNRMVVAVKRLKDPNFTGEVQ-------FQTEVEMIGLALHRNLL 362
+G+GG+G+V+KG L ++ VVA+K L + GE + FQ EV ++ H N++
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 363 RLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQ 422
+LYG P +V ++P G + L D P+ W+ ++ + L A G+ Y+ Q
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAH---PIKWSVKLRLMLDIALGIEYMQNQ 141
Query: 423 CNPKIIHRDVKAANILLDESFE-----AVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPE 477
NP I+HRD+++ NI L E A V DFGL++ + H + + G +APE
Sbjct: 142 -NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ----QSVHSVSGLLGNFQWMAPE 196
Query: 478 YLSTGQSS--EKTDVFGFGVLLLELITGQKALD-VGNGQVQKGMILDCVRTLHEERRLDV 534
+ + S EK D + F ++L ++TG+ D G+++ ++ +R E L
Sbjct: 197 TIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIK---FINMIR----EEGLRP 249
Query: 535 LIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
I D P L +++L C P RP S
Sbjct: 250 TIPEDC-----PPRLRNVIEL---CWSGDPKKRPHFS 278
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 131/271 (48%), Gaps = 31/271 (11%)
Query: 310 ILGQGGYGVVYKGCLPN----RMVVAVKRLKDPNFTGEV-QFQTEVEMIGLALHRNLLRL 364
++G+G +G VY G L + ++ AVK L GEV QF TE ++ H N+L L
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 365 YGFCMTPE-ERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQC 423
G C+ E L+V PYM +G + + +R+ D + L A+G+ +L
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFL---A 148
Query: 424 NPKIIHRDVKAANILLDESFEAVVGDFGLAK-LLDRR-DS-HVTTAVRGTVGHIAPEYLS 480
+ K +HRD+ A N +LDE F V DFGLA+ + D+ DS H T + V +A E L
Sbjct: 149 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 208
Query: 481 TGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDRDL 540
T + + K+DV+ FGVLL EL+T G D L + RRL L
Sbjct: 209 TQKFTTKSDVWSFGVLLWELMTR------GAPPYPDVNTFDITVYLLQGRRL-------L 255
Query: 541 KGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
+ + P + + ++ L+C +RP S
Sbjct: 256 QPEYCP---DPLYEVMLKCWHPKAEMRPSFS 283
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 131/271 (48%), Gaps = 31/271 (11%)
Query: 310 ILGQGGYGVVYKGCLPN----RMVVAVKRLKDPNFTGEV-QFQTEVEMIGLALHRNLLRL 364
++G+G +G VY G L + ++ AVK L GEV QF TE ++ H N+L L
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 365 YGFCMTPE-ERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQC 423
G C+ E L+V PYM +G + + +R+ D + L A+G+ +L
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFL---A 151
Query: 424 NPKIIHRDVKAANILLDESFEAVVGDFGLAK-LLDRR-DS-HVTTAVRGTVGHIAPEYLS 480
+ K +HRD+ A N +LDE F V DFGLA+ + D+ DS H T + V +A E L
Sbjct: 152 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 211
Query: 481 TGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDRDL 540
T + + K+DV+ FGVLL EL+T G D L + RRL L
Sbjct: 212 TQKFTTKSDVWSFGVLLWELMTR------GAPPYPDVNTFDITVYLLQGRRL-------L 258
Query: 541 KGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
+ + P + + ++ L+C +RP S
Sbjct: 259 QPEYCP---DPLYEVMLKCWHPKAEMRPSFS 286
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 131/271 (48%), Gaps = 31/271 (11%)
Query: 310 ILGQGGYGVVYKGCLPN----RMVVAVKRLKDPNFTGEV-QFQTEVEMIGLALHRNLLRL 364
++G+G +G VY G L + ++ AVK L GEV QF TE ++ H N+L L
Sbjct: 96 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 155
Query: 365 YGFCMTPE-ERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQC 423
G C+ E L+V PYM +G + + +R+ D + L A+G+ +L +
Sbjct: 156 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFLASK- 211
Query: 424 NPKIIHRDVKAANILLDESFEAVVGDFGLAK-LLDRR-DS-HVTTAVRGTVGHIAPEYLS 480
K +HRD+ A N +LDE F V DFGLA+ + D+ DS H T + V +A E L
Sbjct: 212 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 269
Query: 481 TGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDRDL 540
T + + K+DV+ FGVLL EL+T G D L + RRL L
Sbjct: 270 TQKFTTKSDVWSFGVLLWELMTR------GAPPYPDVNTFDITVYLLQGRRL-------L 316
Query: 541 KGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
+ + P + + ++ L+C +RP S
Sbjct: 317 QPEYCP---DPLYEVMLKCWHPKAEMRPSFS 344
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 131/271 (48%), Gaps = 31/271 (11%)
Query: 310 ILGQGGYGVVYKGCLPN----RMVVAVKRLKDPNFTGEV-QFQTEVEMIGLALHRNLLRL 364
++G+G +G VY G L + ++ AVK L GEV QF TE ++ H N+L L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 365 YGFCMTPE-ERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQC 423
G C+ E L+V PYM +G + + +R+ D + L A+G+ +L
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFL---A 150
Query: 424 NPKIIHRDVKAANILLDESFEAVVGDFGLAK-LLDRR-DS-HVTTAVRGTVGHIAPEYLS 480
+ K +HRD+ A N +LDE F V DFGLA+ + D+ DS H T + V +A E L
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 210
Query: 481 TGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDRDL 540
T + + K+DV+ FGVLL EL+T G D L + RRL L
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMTR------GAPPYPDVNTFDITVYLLQGRRL-------L 257
Query: 541 KGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
+ + P + + ++ L+C +RP S
Sbjct: 258 QPEYCP---DPLYEVMLKCWHPKAEMRPSFS 285
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 131/271 (48%), Gaps = 31/271 (11%)
Query: 310 ILGQGGYGVVYKGCLPN----RMVVAVKRLKDPNFTGEV-QFQTEVEMIGLALHRNLLRL 364
++G+G +G VY G L + ++ AVK L GEV QF TE ++ H N+L L
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 101
Query: 365 YGFCMTPE-ERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQC 423
G C+ E L+V PYM +G + + +R+ D + L A+G+ +L
Sbjct: 102 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFL---A 155
Query: 424 NPKIIHRDVKAANILLDESFEAVVGDFGLAK-LLDRR-DS-HVTTAVRGTVGHIAPEYLS 480
+ K +HRD+ A N +LDE F V DFGLA+ + D+ DS H T + V +A E L
Sbjct: 156 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 215
Query: 481 TGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDRDL 540
T + + K+DV+ FGVLL EL+T G D L + RRL L
Sbjct: 216 TQKFTTKSDVWSFGVLLWELMTR------GAPPYPDVNTFDITVYLLQGRRL-------L 262
Query: 541 KGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
+ + P + + ++ L+C +RP S
Sbjct: 263 QPEYCP---DPLYEVMLKCWHPKAEMRPSFS 290
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 131/271 (48%), Gaps = 31/271 (11%)
Query: 310 ILGQGGYGVVYKGCLPN----RMVVAVKRLKDPNFTGEV-QFQTEVEMIGLALHRNLLRL 364
++G+G +G VY G L + ++ AVK L GEV QF TE ++ H N+L L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 365 YGFCMTPE-ERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQC 423
G C+ E L+V PYM +G + + +R+ D + L A+G+ +L
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFL---A 150
Query: 424 NPKIIHRDVKAANILLDESFEAVVGDFGLAK-LLDRR-DS-HVTTAVRGTVGHIAPEYLS 480
+ K +HRD+ A N +LDE F V DFGLA+ + D+ DS H T + V +A E L
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 210
Query: 481 TGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDRDL 540
T + + K+DV+ FGVLL EL+T G D L + RRL L
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMTR------GAPPYPDVNTFDITVYLLQGRRL-------L 257
Query: 541 KGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
+ + P + + ++ L+C +RP S
Sbjct: 258 QPEYCP---DPLYEVMLKCWHPKAEMRPSFS 285
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 107/220 (48%), Gaps = 34/220 (15%)
Query: 308 KNILGQGGYGVVYKGCLPN------RMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNL 361
K LG+G +G V+ N +M+VAVK LKDP FQ E E++ H ++
Sbjct: 20 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHI 79
Query: 362 LRLYGFCMTPEERLLVYPYMPNGSVADCLR------------DTRQAKPPLDWNRRMHIA 409
++ YG C + ++V+ YM +G + LR RQAK L ++ +HIA
Sbjct: 80 VKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIA 139
Query: 410 LGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRG 469
A G++YL Q +HRD+ N L+ + +GDFG++ RD + T R
Sbjct: 140 SQIASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIGDFGMS-----RDVYSTDYYR- 190
Query: 470 TVGH-------IAPEYLSTGQSSEKTDVFGFGVLLLELIT 502
GH + PE + + + ++DV+ FGV+L E+ T
Sbjct: 191 VGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 96/192 (50%), Gaps = 6/192 (3%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMT 370
LG G +G V+ G N VAVK LK P F E ++ H L+RLY
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLK-PGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 371 PEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHR 430
E ++ YM GS+ D L+ K L + + + A G+ Y+ + IHR
Sbjct: 80 EEPIYIITEYMAKGSLLDFLKSDEGGKVLLP--KLIDFSAQIAEGMAYIERK---NYIHR 134
Query: 431 DVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 490
D++AAN+L+ ES + DFGLA++++ + + + APE ++ G + K+DV
Sbjct: 135 DLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDV 194
Query: 491 FGFGVLLLELIT 502
+ FG+LL E++T
Sbjct: 195 WSFGILLYEIVT 206
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 133/277 (48%), Gaps = 41/277 (14%)
Query: 311 LGQGGYGVVYKGCL-PNRMVVAVKRLKDPNFTGEVQ-------FQTEVEMIGLALHRNLL 362
+G+GG+G+V+KG L ++ VVA+K L + GE + FQ EV ++ H N++
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 363 RLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQ 422
+LYG P +V ++P G + L D P+ W+ ++ + L A G+ Y+ Q
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAH---PIKWSVKLRLMLDIALGIEYMQNQ 141
Query: 423 CNPKIIHRDVKAANILLDESFE-----AVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPE 477
NP I+HRD+++ NI L E A V DFG ++ + H + + G +APE
Sbjct: 142 -NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ----QSVHSVSGLLGNFQWMAPE 196
Query: 478 YLSTGQSS--EKTDVFGFGVLLLELITGQKALD-VGNGQVQKGMILDCVRTLHEERRLDV 534
+ + S EK D + F ++L ++TG+ D G+++ ++ +R E L
Sbjct: 197 TIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIK---FINMIR----EEGLRP 249
Query: 535 LIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
I D P L +++L C P RP S
Sbjct: 250 TIPEDC-----PPRLRNVIEL---CWSGDPKKRPHFS 278
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 133/277 (48%), Gaps = 41/277 (14%)
Query: 311 LGQGGYGVVYKGCL-PNRMVVAVKRLKDPNFTGEVQ-------FQTEVEMIGLALHRNLL 362
+G+GG+G+V+KG L ++ VVA+K L + GE + FQ EV ++ H N++
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 363 RLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQ 422
+LYG P +V ++P G + L D P+ W+ ++ + L A G+ Y+ Q
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAH---PIKWSVKLRLMLDIALGIEYMQNQ 141
Query: 423 CNPKIIHRDVKAANILLDESFE-----AVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPE 477
NP I+HRD+++ NI L E A V DF L++ + H + + G +APE
Sbjct: 142 -NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ----QSVHSVSGLLGNFQWMAPE 196
Query: 478 YLSTGQSS--EKTDVFGFGVLLLELITGQKALD-VGNGQVQKGMILDCVRTLHEERRLDV 534
+ + S EK D + F ++L ++TG+ D G+++ ++ +R E L
Sbjct: 197 TIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIK---FINMIR----EEGLRP 249
Query: 535 LIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
I D P L +++L C P RP S
Sbjct: 250 TIPEDC-----PPRLRNVIEL---CWSGDPKKRPHFS 278
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 100/195 (51%), Gaps = 7/195 (3%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMT 370
+G G +G+V+ G N+ VA+K +K+ + + E F E E++ H L++LYG C+
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMS-EDDFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 371 PEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHR 430
LV+ +M +G ++D LR R + + L G+ YL E C +IHR
Sbjct: 94 QAPICLVFEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYLEEAC---VIHR 147
Query: 431 DVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 490
D+ A N L+ E+ V DFG+ + + +T + V +PE S + S K+DV
Sbjct: 148 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 207
Query: 491 FGFGVLLLELITGQK 505
+ FGVL+ E+ + K
Sbjct: 208 WSFGVLMWEVFSEGK 222
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 105/217 (48%), Gaps = 11/217 (5%)
Query: 292 RFSFRELQIATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVE 351
R S + +I G + +G G +G VYKG + V + + P F+ EV
Sbjct: 1 RDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVG 60
Query: 352 MIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALG 411
++ H N+L G+ P+ L + GS ++ + + + IA
Sbjct: 61 VLRKTRHVNILLFMGYSTKPQ--LAIVTQWCEGS--SLYHHLHASETKFEMKKLIDIARQ 116
Query: 412 TARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRD-SHVTTAVRGT 470
TARG+ YLH + IIHRD+K+ NI L E +GDFGLA + R SH + G+
Sbjct: 117 TARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGS 173
Query: 471 VGHIAPEYLSTGQS---SEKTDVFGFGVLLLELITGQ 504
+ +APE + S S ++DV+ FG++L EL+TGQ
Sbjct: 174 ILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 210
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/270 (32%), Positives = 130/270 (48%), Gaps = 33/270 (12%)
Query: 309 NILGQGGYGVVYKGCL----PNRMVVAVKRLKDPNFTGEVQ--FQTEVEMIGLALHRNLL 362
++G+G +GVVY G NR+ A+K L +V+ + + M GL H N+L
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLN-HPNVL 85
Query: 363 RLYGFCMTPEE-RLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHE 421
L G + PE ++ PYM +G + +R ++ D + L ARG+ YL E
Sbjct: 86 ALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDL---ISFGLQVARGMEYLAE 142
Query: 422 QCNPKIIHRDVKAANILLDESFEAVVGDFGLAK-LLDRRDSHVTT--AVRGTVGHIAPEY 478
Q K +HRD+ A N +LDESF V DFGLA+ +LDR V R V A E
Sbjct: 143 Q---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALES 199
Query: 479 LSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDR 538
L T + + K+DV+ FGVLL EL+T G + D L + RRL
Sbjct: 200 LQTYRFTTKSDVWSFGVLLWELLTR------GAPPYRHIDPFDLTHFLAQGRRLP----- 248
Query: 539 DLKGSFDPTELEKMVQLALQCTQSHPNLRP 568
+ + P L +++Q QC ++ P +RP
Sbjct: 249 --QPEYCPDSLYQVMQ---QCWEADPAVRP 273
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 99/195 (50%), Gaps = 7/195 (3%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMT 370
+G G +G+V+ G N+ VA+K +++ + E F E E++ H L++LYG C+
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE-DFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 371 PEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHR 430
LV+ +M +G ++D LR R + + L G+ YL E C +IHR
Sbjct: 72 QAPICLVFEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYLEEAC---VIHR 125
Query: 431 DVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 490
D+ A N L+ E+ V DFG+ + + +T + V +PE S + S K+DV
Sbjct: 126 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 185
Query: 491 FGFGVLLLELITGQK 505
+ FGVL+ E+ + K
Sbjct: 186 WSFGVLMWEVFSEGK 200
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 99/195 (50%), Gaps = 7/195 (3%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMT 370
+G G +G+V+ G N+ VA+K +++ + E F E E++ H L++LYG C+
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE-DFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 371 PEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHR 430
LV+ +M +G ++D LR R + + L G+ YL E C +IHR
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYLEEAC---VIHR 127
Query: 431 DVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 490
D+ A N L+ E+ V DFG+ + + +T + V +PE S + S K+DV
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 187
Query: 491 FGFGVLLLELITGQK 505
+ FGVL+ E+ + K
Sbjct: 188 WSFGVLMWEVFSEGK 202
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 99/195 (50%), Gaps = 7/195 (3%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMT 370
+G G +G+V+ G N+ VA+K +++ + E F E E++ H L++LYG C+
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE-DFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 371 PEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHR 430
LV+ +M +G ++D LR R + + L G+ YL E C +IHR
Sbjct: 77 QAPICLVFEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYLEEAC---VIHR 130
Query: 431 DVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 490
D+ A N L+ E+ V DFG+ + + +T + V +PE S + S K+DV
Sbjct: 131 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 190
Query: 491 FGFGVLLLELITGQK 505
+ FGVL+ E+ + K
Sbjct: 191 WSFGVLMWEVFSEGK 205
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 96/192 (50%), Gaps = 6/192 (3%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMT 370
LG G +G V+ G N VAVK LK P F E ++ H L+RLY
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLK-PGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 371 PEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHR 430
E ++ +M GS+ D L+ K L + + + A G+ Y+ + IHR
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKSDEGGKVLLP--KLIDFSAQIAEGMAYIERK---NYIHR 133
Query: 431 DVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 490
D++AAN+L+ ES + DFGLA++++ + + + APE ++ G + K++V
Sbjct: 134 DLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNV 193
Query: 491 FGFGVLLLELIT 502
+ FG+LL E++T
Sbjct: 194 WSFGILLYEIVT 205
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 123/259 (47%), Gaps = 25/259 (9%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMT 370
LGQG +G V+ G VA+K LK + E F E +++ H L++LY ++
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYA-VVS 249
Query: 371 PEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHR 430
E +V YM GS+ D L+ + L + + +A A G+ Y+ E+ N +HR
Sbjct: 250 EEPIYIVTEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYV-ERMN--YVHR 304
Query: 431 DVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 490
D++AANIL+ E+ V DFGLA+L++ + + + APE G+ + K+DV
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 364
Query: 491 FGFGVLLLELITGQKALDVGNGQV-QKGMILDCVRTLHEERRLDVLIDRDLKGSFDPTEL 549
+ FG+LL EL T G+V GM+ R + ++R + P
Sbjct: 365 WSFGILLTELTT--------KGRVPYPGMV---------NREVLDQVERGYRMPCPPECP 407
Query: 550 EKMVQLALQCTQSHPNLRP 568
E + L QC + P RP
Sbjct: 408 ESLHDLMCQCWRKEPEERP 426
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 104/217 (47%), Gaps = 11/217 (5%)
Query: 292 RFSFRELQIATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVE 351
R S + +I G + +G G +G VYKG + V + + P F+ EV
Sbjct: 13 RDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVG 72
Query: 352 MIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALG 411
++ H N+L G+ P+ L + GS ++ + + + IA
Sbjct: 73 VLRKTRHVNILLFMGYSTKPQ--LAIVTQWCEGS--SLYHHLHASETKFEMKKLIDIARQ 128
Query: 412 TARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDR-RDSHVTTAVRGT 470
TARG+ YLH + IIHRD+K+ NI L E +GDFGLA R SH + G+
Sbjct: 129 TARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGS 185
Query: 471 VGHIAPEYLSTGQS---SEKTDVFGFGVLLLELITGQ 504
+ +APE + S S ++DV+ FG++L EL+TGQ
Sbjct: 186 ILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 123/259 (47%), Gaps = 25/259 (9%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMT 370
LGQG +G V+ G VA+K LK + E F E +++ H L++LY ++
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYA-VVS 249
Query: 371 PEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHR 430
E +V YM GS+ D L+ + L + + +A A G+ Y+ E+ N +HR
Sbjct: 250 EEPIYIVTEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYV-ERMN--YVHR 304
Query: 431 DVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 490
D++AANIL+ E+ V DFGLA+L++ + + + APE G+ + K+DV
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 364
Query: 491 FGFGVLLLELITGQKALDVGNGQV-QKGMILDCVRTLHEERRLDVLIDRDLKGSFDPTEL 549
+ FG+LL EL T G+V GM+ R + ++R + P
Sbjct: 365 WSFGILLTELTT--------KGRVPYPGMV---------NREVLDQVERGYRMPCPPECP 407
Query: 550 EKMVQLALQCTQSHPNLRP 568
E + L QC + P RP
Sbjct: 408 ESLHDLMCQCWRKEPEERP 426
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 123/259 (47%), Gaps = 25/259 (9%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMT 370
LGQG +G V+ G VA+K LK N + E F E +++ H L++LY ++
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEA-FLQEAQVMKKLRHEKLVQLYA-VVS 250
Query: 371 PEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHR 430
E +V YM GS+ D L+ + L + + +A A G+ Y+ E+ N +HR
Sbjct: 251 EEPIYIVTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYV-ERMN--YVHR 305
Query: 431 DVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 490
D++AANIL+ E+ V DFGL +L++ + + + APE G+ + K+DV
Sbjct: 306 DLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 365
Query: 491 FGFGVLLLELITGQKALDVGNGQV-QKGMILDCVRTLHEERRLDVLIDRDLKGSFDPTEL 549
+ FG+LL EL T G+V GM+ R + ++R + P
Sbjct: 366 WSFGILLTELTT--------KGRVPYPGMV---------NREVLDQVERGYRMPCPPECP 408
Query: 550 EKMVQLALQCTQSHPNLRP 568
E + L QC + P RP
Sbjct: 409 ESLHDLMCQCWRKDPEERP 427
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 123/259 (47%), Gaps = 25/259 (9%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMT 370
LGQG +G V+ G VA+K LK + E F E +++ H L++LY ++
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYA-VVS 332
Query: 371 PEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHR 430
E +V YM GS+ D L+ + L + + +A A G+ Y+ E+ N +HR
Sbjct: 333 EEPIYIVTEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYV-ERMN--YVHR 387
Query: 431 DVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 490
D++AANIL+ E+ V DFGLA+L++ + + + APE G+ + K+DV
Sbjct: 388 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 447
Query: 491 FGFGVLLLELITGQKALDVGNGQVQ-KGMILDCVRTLHEERRLDVLIDRDLKGSFDPTEL 549
+ FG+LL EL T G+V GM+ R + ++R + P
Sbjct: 448 WSFGILLTELTT--------KGRVPYPGMV---------NREVLDQVERGYRMPCPPECP 490
Query: 550 EKMVQLALQCTQSHPNLRP 568
E + L QC + P RP
Sbjct: 491 ESLHDLMCQCWRKEPEERP 509
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 102/212 (48%), Gaps = 11/212 (5%)
Query: 297 ELQIATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLA 356
+ +I G + +G G +G VYKG + V + + P F+ EV ++
Sbjct: 18 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 77
Query: 357 LHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGL 416
H N+L G+ P+ L + GS ++ + + + IA TARG+
Sbjct: 78 RHVNILLFMGYSTAPQ--LAIVTQWCEGS--SLYHHLHASETKFEMKKLIDIARQTARGM 133
Query: 417 LYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDR-RDSHVTTAVRGTVGHIA 475
YLH + IIHRD+K+ NI L E +GDFGLA R SH + G++ +A
Sbjct: 134 DYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMA 190
Query: 476 PEYLSTGQS---SEKTDVFGFGVLLLELITGQ 504
PE + S S ++DV+ FG++L EL+TGQ
Sbjct: 191 PEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 123/259 (47%), Gaps = 25/259 (9%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMT 370
LGQG +G V+ G VA+K LK + E F E +++ H L++LY ++
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYA-VVS 249
Query: 371 PEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHR 430
E +V YM GS+ D L+ + L + + +A A G+ Y+ E+ N +HR
Sbjct: 250 EEPIYIVGEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYV-ERMN--YVHR 304
Query: 431 DVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 490
D++AANIL+ E+ V DFGLA+L++ + + + APE G+ + K+DV
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 364
Query: 491 FGFGVLLLELITGQKALDVGNGQV-QKGMILDCVRTLHEERRLDVLIDRDLKGSFDPTEL 549
+ FG+LL EL T G+V GM+ R + ++R + P
Sbjct: 365 WSFGILLTELTT--------KGRVPYPGMV---------NREVLDQVERGYRMPCPPECP 407
Query: 550 EKMVQLALQCTQSHPNLRP 568
E + L QC + P RP
Sbjct: 408 ESLHDLMCQCWRKEPEERP 426
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 123/259 (47%), Gaps = 25/259 (9%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMT 370
LGQG +G V+ G VA+K LK + E F E +++ H L++LY ++
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYA-VVS 73
Query: 371 PEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHR 430
E +V YM GS+ D L+ + L + + +A A G+ Y+ E+ N +HR
Sbjct: 74 EEPIXIVTEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYV-ERMN--YVHR 128
Query: 431 DVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 490
D++AANIL+ E+ V DFGLA+L++ + + + APE G+ + K+DV
Sbjct: 129 DLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDV 188
Query: 491 FGFGVLLLELITGQKALDVGNGQVQ-KGMILDCVRTLHEERRLDVLIDRDLKGSFDPTEL 549
+ FG+LL EL T G+V GM+ R + ++R + P
Sbjct: 189 WSFGILLTELTT--------KGRVPYPGMV---------NREVLDQVERGYRMPCPPECP 231
Query: 550 EKMVQLALQCTQSHPNLRP 568
E + L QC + P RP
Sbjct: 232 ESLHDLMCQCWRKEPEERP 250
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 102/192 (53%), Gaps = 7/192 (3%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMT 370
LG G +G V+ VAVK +K + + E F E ++ H L++L+ +T
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQHDKLVKLHA-VVT 80
Query: 371 PEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHR 430
E ++ +M GS+ D L+ +K PL + + + A G+ ++ EQ N IHR
Sbjct: 81 KEPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFI-EQRN--YIHR 135
Query: 431 DVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 490
D++AANIL+ S + DFGLA++++ + + + APE ++ G + K+DV
Sbjct: 136 DLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDV 195
Query: 491 FGFGVLLLELIT 502
+ FG+LL+E++T
Sbjct: 196 WSFGILLMEIVT 207
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 98/195 (50%), Gaps = 7/195 (3%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMT 370
+G G +G+V+ G N+ VA+K +++ + E F E E++ H L++LYG C+
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE-DFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 371 PEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHR 430
LV +M +G ++D LR R + + L G+ YL E C +IHR
Sbjct: 75 QAPICLVTEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYLEEAC---VIHR 128
Query: 431 DVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 490
D+ A N L+ E+ V DFG+ + + +T + V +PE S + S K+DV
Sbjct: 129 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 188
Query: 491 FGFGVLLLELITGQK 505
+ FGVL+ E+ + K
Sbjct: 189 WSFGVLMWEVFSEGK 203
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 123/259 (47%), Gaps = 25/259 (9%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMT 370
LGQG +G V+ G VA+K LK + E F E +++ H L++LY ++
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYA-VVS 76
Query: 371 PEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHR 430
E +V YM GS+ D L+ + L + + +A A G+ Y+ E+ N +HR
Sbjct: 77 EEPIYIVTEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYV-ERMN--YVHR 131
Query: 431 DVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 490
D++AANIL+ E+ V DFGLA+L++ + + + APE G+ + K+DV
Sbjct: 132 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 191
Query: 491 FGFGVLLLELITGQKALDVGNGQV-QKGMILDCVRTLHEERRLDVLIDRDLKGSFDPTEL 549
+ FG+LL EL T G+V GM+ R + ++R + P
Sbjct: 192 WSFGILLTELTT--------KGRVPYPGMV---------NREVLDQVERGYRMPCPPECP 234
Query: 550 EKMVQLALQCTQSHPNLRP 568
E + L QC + P RP
Sbjct: 235 ESLHDLMCQCWRKEPEERP 253
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 102/192 (53%), Gaps = 7/192 (3%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMT 370
LG G +G V+ VAVK +K + + E F E ++ H L++L+ +T
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQHDKLVKLHA-VVT 253
Query: 371 PEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHR 430
E ++ +M GS+ D L+ +K PL + + + A G+ ++ EQ N IHR
Sbjct: 254 KEPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFI-EQRN--YIHR 308
Query: 431 DVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 490
D++AANIL+ S + DFGLA++++ + + + APE ++ G + K+DV
Sbjct: 309 DLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDV 368
Query: 491 FGFGVLLLELIT 502
+ FG+LL+E++T
Sbjct: 369 WSFGILLMEIVT 380
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 123/259 (47%), Gaps = 25/259 (9%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMT 370
LGQG +G V+ G VA+K LK + E F E +++ H L++LY ++
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYA-VVS 83
Query: 371 PEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHR 430
E +V YM GS+ D L+ + L + + +A A G+ Y+ E+ N +HR
Sbjct: 84 EEPIYIVIEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYV-ERMN--YVHR 138
Query: 431 DVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 490
D++AANIL+ E+ V DFGLA+L++ + + + APE G+ + K+DV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 491 FGFGVLLLELITGQKALDVGNGQVQ-KGMILDCVRTLHEERRLDVLIDRDLKGSFDPTEL 549
+ FG+LL EL T G+V GM+ R + ++R + P
Sbjct: 199 WSFGILLTELTT--------KGRVPYPGMV---------NREVLDQVERGYRMPCPPECP 241
Query: 550 EKMVQLALQCTQSHPNLRP 568
E + L QC + P RP
Sbjct: 242 ESLHDLMCQCWRKDPEERP 260
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 114/230 (49%), Gaps = 21/230 (9%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMT 370
LG G +G V+ G VA+K LK + E F E +++ H L++LY ++
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPE-SFLEEAQIMKKLKHDKLVQLYA-VVS 74
Query: 371 PEERLLVYPYMPNGSVADCLRDT--RQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKII 428
E +V YM GS+ D L+D R K P + +A A G+ Y+ E+ N I
Sbjct: 75 EEPIYIVTEYMNKGSLLDFLKDGEGRALKLP----NLVDMAAQVAAGMAYI-ERMN--YI 127
Query: 429 HRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKT 488
HRD+++ANIL+ + DFGLA+L++ + + + APE G+ + K+
Sbjct: 128 HRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 187
Query: 489 DVFGFGVLLLELITGQKALDVGNG------QVQKGMIL----DCVRTLHE 528
DV+ FG+LL EL+T + G QV++G + DC +LHE
Sbjct: 188 DVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPISLHE 237
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 123/259 (47%), Gaps = 25/259 (9%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMT 370
LGQG +G V+ G VA+K LK + E F E +++ H L++LY ++
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKIRHEKLVQLYA-VVS 83
Query: 371 PEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHR 430
E +V YM GS+ D L+ + L + + +A A G+ Y+ E+ N +HR
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYV-ERMN--YVHR 138
Query: 431 DVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 490
D++AANIL+ E+ V DFGLA+L++ + + + APE G+ + K+DV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 491 FGFGVLLLELITGQKALDVGNGQV-QKGMILDCVRTLHEERRLDVLIDRDLKGSFDPTEL 549
+ FG+LL EL T G+V GM+ R + ++R + P
Sbjct: 199 WSFGILLTELTT--------KGRVPYPGMV---------NREVLDQVERGYRMPCPPECP 241
Query: 550 EKMVQLALQCTQSHPNLRP 568
E + L QC + P RP
Sbjct: 242 ESLHDLMCQCWRKDPEERP 260
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 123/259 (47%), Gaps = 25/259 (9%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMT 370
LGQG +G V+ G VA+K LK + E F E +++ H L++LY ++
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYA-VVS 83
Query: 371 PEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHR 430
E +V YM GS+ D L+ + L + + +A A G+ Y+ E+ N +HR
Sbjct: 84 EEPIYIVIEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYV-ERMN--YVHR 138
Query: 431 DVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 490
D++AANIL+ E+ V DFGLA+L++ + + + APE G+ + K+DV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 491 FGFGVLLLELITGQKALDVGNGQV-QKGMILDCVRTLHEERRLDVLIDRDLKGSFDPTEL 549
+ FG+LL EL T G+V GM+ R + ++R + P
Sbjct: 199 WSFGILLTELTT--------KGRVPYPGMV---------NREVLDQVERGYRMPCPPECP 241
Query: 550 EKMVQLALQCTQSHPNLRP 568
E + L QC + P RP
Sbjct: 242 ESLHDLMCQCWRKDPEERP 260
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 123/259 (47%), Gaps = 25/259 (9%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMT 370
LGQG +G V+ G VA+K LK + E F E +++ H L++LY ++
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYA-VVS 74
Query: 371 PEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHR 430
E +V YM GS+ D L+ + L + + +A A G+ Y+ E+ N +HR
Sbjct: 75 EEPIYIVTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYV-ERMN--YVHR 129
Query: 431 DVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 490
D++AANIL+ E+ V DFGLA+L++ + + + APE G+ + K+DV
Sbjct: 130 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 189
Query: 491 FGFGVLLLELITGQKALDVGNGQVQ-KGMILDCVRTLHEERRLDVLIDRDLKGSFDPTEL 549
+ FG+LL EL T G+V GM+ R + ++R + P
Sbjct: 190 WSFGILLTELTT--------KGRVPYPGMV---------NREVLDQVERGYRMPCPPECP 232
Query: 550 EKMVQLALQCTQSHPNLRP 568
E + L QC + P RP
Sbjct: 233 ESLHDLMCQCWRKDPEERP 251
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 123/259 (47%), Gaps = 25/259 (9%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMT 370
LGQG +G V+ G VA+K LK + E F E +++ H L++LY ++
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYA-VVS 72
Query: 371 PEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHR 430
E +V YM GS+ D L+ + L + + +A A G+ Y+ E+ N +HR
Sbjct: 73 EEPIYIVTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYV-ERMN--YVHR 127
Query: 431 DVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 490
D++AANIL+ E+ V DFGLA+L++ + + + APE G+ + K+DV
Sbjct: 128 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 187
Query: 491 FGFGVLLLELITGQKALDVGNGQV-QKGMILDCVRTLHEERRLDVLIDRDLKGSFDPTEL 549
+ FG+LL EL T G+V GM+ R + ++R + P
Sbjct: 188 WSFGILLTELTT--------KGRVPYPGMV---------NREVLDQVERGYRMPCPPECP 230
Query: 550 EKMVQLALQCTQSHPNLRP 568
E + L QC + P RP
Sbjct: 231 ESLHDLMCQCWRKDPEERP 249
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 123/259 (47%), Gaps = 25/259 (9%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMT 370
LGQG +G V+ G VA+K LK + E F E +++ H L++LY ++
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYA-VVS 83
Query: 371 PEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHR 430
E +V YM GS+ D L+ + L + + +A A G+ Y+ E+ N +HR
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYV-ERMN--YVHR 138
Query: 431 DVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 490
D++AANIL+ E+ V DFGLA+L++ + + + APE G+ + K+DV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 491 FGFGVLLLELITGQKALDVGNGQV-QKGMILDCVRTLHEERRLDVLIDRDLKGSFDPTEL 549
+ FG+LL EL T G+V GM+ R + ++R + P
Sbjct: 199 WSFGILLTELTT--------KGRVPYPGMV---------NREVLDQVERGYRMPCPPECP 241
Query: 550 EKMVQLALQCTQSHPNLRP 568
E + L QC + P RP
Sbjct: 242 ESLHDLMCQCWRKDPEERP 260
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 123/259 (47%), Gaps = 25/259 (9%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMT 370
LGQG +G V+ G VA+K LK + E F E +++ H L++LY ++
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYA-VVS 83
Query: 371 PEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHR 430
E +V YM GS+ D L+ + L + + +A A G+ Y+ E+ N +HR
Sbjct: 84 EEPIYIVCEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYV-ERMN--YVHR 138
Query: 431 DVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 490
D++AANIL+ E+ V DFGLA+L++ + + + APE G+ + K+DV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 491 FGFGVLLLELITGQKALDVGNGQV-QKGMILDCVRTLHEERRLDVLIDRDLKGSFDPTEL 549
+ FG+LL EL T G+V GM+ R + ++R + P
Sbjct: 199 WSFGILLTELTT--------KGRVPYPGMV---------NREVLDQVERGYRMPCPPECP 241
Query: 550 EKMVQLALQCTQSHPNLRP 568
E + L QC + P RP
Sbjct: 242 ESLHDLMCQCWRKDPEERP 260
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 117/251 (46%), Gaps = 36/251 (14%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMT 370
+G G +G VYKG + V + ++ DP F+ EV ++ H N+L G+ MT
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGY-MT 102
Query: 371 PEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHR 430
+ +V + S+ L ++ K + + IA TA+G+ YLH + IIHR
Sbjct: 103 KDNLAIVTQWCEGSSLYKHLH-VQETK--FQMFQLIDIARQTAQGMDYLHAK---NIIHR 156
Query: 431 DVKAANILLDESFEAVVGDFGLAKLLDRRD-SHVTTAVRGTVGHIAPEYLSTGQS---SE 486
D+K+ NI L E +GDFGLA + R S G+V +APE + + S
Sbjct: 157 DMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSF 216
Query: 487 KTDVFGFGVLLLELITG-----------QKALDVGNG--------------QVQKGMILD 521
++DV+ +G++L EL+TG Q VG G + K ++ D
Sbjct: 217 QSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVAD 276
Query: 522 CVRTLHEERRL 532
CV+ + EER L
Sbjct: 277 CVKKVKEERPL 287
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 134/300 (44%), Gaps = 57/300 (19%)
Query: 299 QIATGNFSPKNILGQGGYGVVYKGCLPN------RMVVAVKRLKDPNFTGEVQFQTEVEM 352
I N K LG+G +G V+ N +++VAVK LKD + F E E+
Sbjct: 9 HIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAEL 68
Query: 353 IGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRD-------TRQAKPP--LDWN 403
+ H ++++ YG C+ + ++V+ YM +G + LR + PP L +
Sbjct: 69 LTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQS 128
Query: 404 RRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV 463
+ +HIA A G++YL Q +HRD+ N L+ E+ +GDFG++ RD +
Sbjct: 129 QMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFGMS-----RDVYS 180
Query: 464 TTAVRGTVGH-------IAPEYLSTGQSSEKTDVFGFGVLLLELIT--GQKALDVGNGQV 514
T R GH + PE + + + ++DV+ GV+L E+ T Q + N +V
Sbjct: 181 TDYYR-VGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEV 239
Query: 515 QKGMILDCV---RTLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
++C+ R L R T +++ +L L C Q P++R +
Sbjct: 240 -----IECITQGRVLQRPR----------------TCPQEVYELMLGCWQREPHMRKNIK 278
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 98/195 (50%), Gaps = 7/195 (3%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMT 370
+G G +G+V+ G N+ VA+K +++ + E F E E++ H L++LYG C+
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE-DFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 371 PEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHR 430
LV+ +M +G ++D LR R + + L G+ YL E +IHR
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYLEE---ASVIHR 127
Query: 431 DVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 490
D+ A N L+ E+ V DFG+ + + +T + V +PE S + S K+DV
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 187
Query: 491 FGFGVLLLELITGQK 505
+ FGVL+ E+ + K
Sbjct: 188 WSFGVLMWEVFSEGK 202
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 123/259 (47%), Gaps = 25/259 (9%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMT 370
LGQG +G V+ G VA+K LK + E F E +++ H L++LY ++
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYA-VVS 80
Query: 371 PEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHR 430
E +V YM GS+ D L+ + L + + ++ A G+ Y+ E+ N +HR
Sbjct: 81 EEPIYIVTEYMNKGSLLDFLKG--ETGKYLRLPQLVDMSAQIASGMAYV-ERMN--YVHR 135
Query: 431 DVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 490
D++AANIL+ E+ V DFGLA+L++ + + + APE G+ + K+DV
Sbjct: 136 DLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDV 195
Query: 491 FGFGVLLLELITGQKALDVGNGQVQ-KGMILDCVRTLHEERRLDVLIDRDLKGSFDPTEL 549
+ FG+LL EL T G+V GM+ R + ++R + P
Sbjct: 196 WSFGILLTELTT--------KGRVPYPGMV---------NREVLDQVERGYRMPCPPECP 238
Query: 550 EKMVQLALQCTQSHPNLRP 568
E + L QC + P RP
Sbjct: 239 ESLHDLMCQCWRKEPEERP 257
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 123/259 (47%), Gaps = 25/259 (9%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMT 370
LGQG +G V+ G VA+K LK + E F E +++ H L++LY ++
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYA-VVS 80
Query: 371 PEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHR 430
E +V YM GS+ D L+ + L + + ++ A G+ Y+ E+ N +HR
Sbjct: 81 EEPIYIVTEYMNKGSLLDFLKG--ETGKYLRLPQLVDMSAQIASGMAYV-ERMN--YVHR 135
Query: 431 DVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 490
D++AANIL+ E+ V DFGLA+L++ + + + APE G+ + K+DV
Sbjct: 136 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 195
Query: 491 FGFGVLLLELITGQKALDVGNGQV-QKGMILDCVRTLHEERRLDVLIDRDLKGSFDPTEL 549
+ FG+LL EL T G+V GM+ R + ++R + P
Sbjct: 196 WSFGILLTELTT--------KGRVPYPGMV---------NREVLDQVERGYRMPCPPECP 238
Query: 550 EKMVQLALQCTQSHPNLRP 568
E + L QC + P RP
Sbjct: 239 ESLHDLMCQCWRKEPEERP 257
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 122/259 (47%), Gaps = 25/259 (9%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMT 370
LGQG +G V+ G VA+K LK + E F E +++ H L++LY ++
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYA-VVS 83
Query: 371 PEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHR 430
E +V YM GS+ D L+ + L + + +A A G+ Y+ E+ N +HR
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYV-ERMN--YVHR 138
Query: 431 DVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 490
D+ AANIL+ E+ V DFGLA+L++ + + + APE G+ + K+DV
Sbjct: 139 DLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 491 FGFGVLLLELITGQKALDVGNGQV-QKGMILDCVRTLHEERRLDVLIDRDLKGSFDPTEL 549
+ FG+LL EL T G+V GM+ R + ++R + P
Sbjct: 199 WSFGILLTELTT--------KGRVPYPGMV---------NREVLDQVERGYRMPCPPECP 241
Query: 550 EKMVQLALQCTQSHPNLRP 568
E + L QC + P RP
Sbjct: 242 ESLHDLMCQCWRKDPEERP 260
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 106/218 (48%), Gaps = 11/218 (5%)
Query: 291 KRFSFRELQIATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEV 350
+R S + +I G + +G G +G VYKG + V + + P F+ EV
Sbjct: 24 RRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEV 83
Query: 351 EMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIAL 410
++ H N+L G+ P+ +V + S+ L + + + + IA
Sbjct: 84 GVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIAR 139
Query: 411 GTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRD-SHVTTAVRG 469
TA+G+ YLH + IIHRD+K+ NI L E +GDFGLA + R SH + G
Sbjct: 140 QTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG 196
Query: 470 TVGHIAPEYLSTGQS---SEKTDVFGFGVLLLELITGQ 504
++ +APE + S ++DV+ FG++L EL+TGQ
Sbjct: 197 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 106/218 (48%), Gaps = 11/218 (5%)
Query: 291 KRFSFRELQIATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEV 350
+R S + +I G + +G G +G VYKG + V + + P F+ EV
Sbjct: 23 RRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEV 82
Query: 351 EMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIAL 410
++ H N+L G+ P+ +V + S+ L + + + + IA
Sbjct: 83 GVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIAR 138
Query: 411 GTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRD-SHVTTAVRG 469
TA+G+ YLH + IIHRD+K+ NI L E +GDFGLA + R SH + G
Sbjct: 139 QTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG 195
Query: 470 TVGHIAPEYLSTGQS---SEKTDVFGFGVLLLELITGQ 504
++ +APE + S ++DV+ FG++L EL+TGQ
Sbjct: 196 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 233
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 104/210 (49%), Gaps = 7/210 (3%)
Query: 294 SFRELQIATGNFSPKNILGQGGYGVVYKGCLPN-RMVVAVKRLKDPNFTGEVQFQTEVEM 352
S + ++ + + K+ LG G YG VY G + VAVK LK+ E +F E +
Sbjct: 23 SMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 81
Query: 353 IGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGT 412
+ H NL++L G C +V YMP G++ D LR+ + + + +++A
Sbjct: 82 MKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREE--VTAVVLLYMATQI 139
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVG 472
+ + YL ++ IHRD+ A N L+ E+ V DFGL++L+ + +
Sbjct: 140 SSAMEYLEKK---NFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIK 196
Query: 473 HIAPEYLSTGQSSEKTDVFGFGVLLLELIT 502
APE L+ S K+DV+ FGVLL E+ T
Sbjct: 197 WTAPESLAYNTFSIKSDVWAFGVLLWEIAT 226
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 122/259 (47%), Gaps = 25/259 (9%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMT 370
LGQG +G V+ G VA+K LK + E F E +++ H L++LY ++
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYA-VVS 83
Query: 371 PEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHR 430
E +V YM G + D L+ + L + + +A A G+ Y+ E+ N +HR
Sbjct: 84 EEPIYIVMEYMSKGCLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYV-ERMN--YVHR 138
Query: 431 DVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 490
D++AANIL+ E+ V DFGLA+L++ + + + APE G+ + K+DV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 491 FGFGVLLLELITGQKALDVGNGQV-QKGMILDCVRTLHEERRLDVLIDRDLKGSFDPTEL 549
+ FG+LL EL T G+V GM+ R + ++R + P
Sbjct: 199 WSFGILLTELTT--------KGRVPYPGMV---------NREVLDQVERGYRMPCPPECP 241
Query: 550 EKMVQLALQCTQSHPNLRP 568
E + L QC + P RP
Sbjct: 242 ESLHDLMCQCWRKDPEERP 260
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 134/285 (47%), Gaps = 24/285 (8%)
Query: 288 GHLKRFSFRELQIATGNFSPKNILGQGGYGVVYKGCLPN-RMVVAVKRLKDPNFTGEVQF 346
GH+ ++ + ++ + + K+ LG G YG VY+G + VAVK LK+ E +F
Sbjct: 1 GHMSP-NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EF 58
Query: 347 QTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRM 406
E ++ H NL++L G C ++ +M G++ D LR+ + + ++ +
Sbjct: 59 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLL 116
Query: 407 HIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTA 466
++A + + YL ++ IHRD+ A N L+ E+ V DFGL++L+
Sbjct: 117 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAG 173
Query: 467 VRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTL 526
+ + APE L+ + S K+DV+ FGVLL E+ T + G +D +
Sbjct: 174 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG---------IDLSQVY 224
Query: 527 HEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
L+++D + EK+ +L C Q +P+ RP +
Sbjct: 225 E-------LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFA 262
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 122/259 (47%), Gaps = 25/259 (9%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMT 370
LGQG +G V+ G VA+K LK + E F E +++ H L++LY ++
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYA-VVS 83
Query: 371 PEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHR 430
E +V YM G + D L+ + L + + +A A G+ Y+ E+ N +HR
Sbjct: 84 EEPIYIVTEYMSKGCLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYV-ERMN--YVHR 138
Query: 431 DVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 490
D++AANIL+ E+ V DFGLA+L++ + + + APE G+ + K+DV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 491 FGFGVLLLELITGQKALDVGNGQV-QKGMILDCVRTLHEERRLDVLIDRDLKGSFDPTEL 549
+ FG+LL EL T G+V GM+ R + ++R + P
Sbjct: 199 WSFGILLTELTT--------KGRVPYPGMV---------NREVLDQVERGYRMPCPPECP 241
Query: 550 EKMVQLALQCTQSHPNLRP 568
E + L QC + P RP
Sbjct: 242 ESLHDLMCQCWRKDPEERP 260
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 130/280 (46%), Gaps = 25/280 (8%)
Query: 294 SFRELQIATGNFSPKNILGQGGYGVVYKGCLPN-RMVVAVKRLKDPNFTGEVQFQTEVEM 352
S + ++ + + K+ LG G YG VY+G + VAVK LK+ E +F E +
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 60
Query: 353 IGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRD-TRQAKPPLDWNRRMHIALG 411
+ H NL++L G C ++ +M G++ D LR+ RQ + +++A
Sbjct: 61 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAV---VLLYMATQ 117
Query: 412 TARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTV 471
+ + YL ++ IHRD+ A N L+ E+ V DFGL++L+ + +
Sbjct: 118 ISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI 174
Query: 472 GHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERR 531
APE L+ + S K+DV+ FGVLL E+ T + G Q ++E
Sbjct: 175 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQ----------VYE--- 221
Query: 532 LDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
L+++D + EK+ +L C Q +P+ RP +
Sbjct: 222 ---LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFA 258
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 131/279 (46%), Gaps = 23/279 (8%)
Query: 294 SFRELQIATGNFSPKNILGQGGYGVVYKGCLPN-RMVVAVKRLKDPNFTGEVQFQTEVEM 352
++ + ++ + + K+ LG G YG VY+G + VAVK LK+ E +F E +
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 67
Query: 353 IGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGT 412
+ H NL++L G C ++ +M G++ D LR+ + + ++ +++A
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQI 125
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVG 472
+ + YL ++ IHRD+ A N L+ E+ V DFGL++L+ + +
Sbjct: 126 SSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK 182
Query: 473 HIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRL 532
APE L+ + S K+DV+ FGVLL E+ T + G +D +
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG---------IDLSQVYE----- 228
Query: 533 DVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
L+++D + EK+ +L C Q +P+ RP +
Sbjct: 229 --LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFA 265
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 131/279 (46%), Gaps = 23/279 (8%)
Query: 294 SFRELQIATGNFSPKNILGQGGYGVVYKGCLPN-RMVVAVKRLKDPNFTGEVQFQTEVEM 352
++ + ++ + + K+ LG G YG VY+G + VAVK LK+ E +F E +
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 63
Query: 353 IGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGT 412
+ H NL++L G C ++ +M G++ D LR+ + + ++ +++A
Sbjct: 64 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQI 121
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVG 472
+ + YL ++ IHRD+ A N L+ E+ V DFGL++L+ + +
Sbjct: 122 SSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK 178
Query: 473 HIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRL 532
APE L+ + S K+DV+ FGVLL E+ T + G +D +
Sbjct: 179 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG---------IDLSQVYE----- 224
Query: 533 DVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
L+++D + EK+ +L C Q +P+ RP +
Sbjct: 225 --LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFA 261
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 131/279 (46%), Gaps = 23/279 (8%)
Query: 294 SFRELQIATGNFSPKNILGQGGYGVVYKGCLPN-RMVVAVKRLKDPNFTGEVQFQTEVEM 352
++ + ++ + + K+ LG G YG VY+G + VAVK LK+ E +F E +
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 67
Query: 353 IGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGT 412
+ H NL++L G C ++ +M G++ D LR+ + + ++ +++A
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQI 125
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVG 472
+ + YL ++ IHRD+ A N L+ E+ V DFGL++L+ + +
Sbjct: 126 SSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 182
Query: 473 HIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRL 532
APE L+ + S K+DV+ FGVLL E+ T + G +D +
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG---------IDLSQVYE----- 228
Query: 533 DVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
L+++D + EK+ +L C Q +P+ RP +
Sbjct: 229 --LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFA 265
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 108/220 (49%), Gaps = 23/220 (10%)
Query: 298 LQIATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPN--FTGEVQ-FQTEVEMIG 354
L+I + + I+G GG+G VY+ V DP+ + ++ + E ++
Sbjct: 2 LEIDFAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFA 61
Query: 355 LALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTAR 414
+ H N++ L G C+ LV + G + L R PP + ++ A+ AR
Sbjct: 62 MLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRI--PP---DILVNWAVQIAR 116
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFE--------AVVGDFGLAKLLDRRDSHVTT- 465
G+ YLH++ IIHRD+K++NIL+ + E + DFGLA R+ H TT
Sbjct: 117 GMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA-----REWHRTTK 171
Query: 466 -AVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQ 504
+ G +APE + S+ +DV+ +GVLL EL+TG+
Sbjct: 172 MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGE 211
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 134/285 (47%), Gaps = 24/285 (8%)
Query: 288 GHLKRFSFRELQIATGNFSPKNILGQGGYGVVYKGCLPN-RMVVAVKRLKDPNFTGEVQF 346
GH+ ++ + ++ + + K+ LG G YG VY+G + VAVK LK+ E +F
Sbjct: 1 GHMSP-NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EF 58
Query: 347 QTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRM 406
E ++ H NL++L G C ++ +M G++ D LR+ + + ++ +
Sbjct: 59 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLL 116
Query: 407 HIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTA 466
++A + + YL ++ IHRD+ A N L+ E+ V DFGL++L+
Sbjct: 117 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 173
Query: 467 VRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTL 526
+ + APE L+ + S K+DV+ FGVLL E+ T + G +D +
Sbjct: 174 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG---------IDLSQVY 224
Query: 527 HEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
L+++D + EK+ +L C Q +P+ RP +
Sbjct: 225 E-------LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFA 262
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 131/279 (46%), Gaps = 23/279 (8%)
Query: 294 SFRELQIATGNFSPKNILGQGGYGVVYKGCLPN-RMVVAVKRLKDPNFTGEVQFQTEVEM 352
++ + ++ + + K+ LG G YG VY+G + VAVK LK+ E +F E +
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 63
Query: 353 IGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGT 412
+ H NL++L G C ++ +M G++ D LR+ + + ++ +++A
Sbjct: 64 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQI 121
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVG 472
+ + YL ++ IHRD+ A N L+ E+ V DFGL++L+ + +
Sbjct: 122 SSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIK 178
Query: 473 HIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRL 532
APE L+ + S K+DV+ FGVLL E+ T + G +D +
Sbjct: 179 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG---------IDLSQVYE----- 224
Query: 533 DVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
L+++D + EK+ +L C Q +P+ RP +
Sbjct: 225 --LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFA 261
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 134/278 (48%), Gaps = 42/278 (15%)
Query: 308 KNILGQGGYGVVYKGCLP-----NRMVVAVKRLKDPNFTGE--VQFQTEVEMIGLALHRN 360
+ ++G G +G VYKG L + VA+K LK +T + V F E ++G H N
Sbjct: 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLK-AGYTEKQRVDFLGEAGIMGQFSHHN 107
Query: 361 LLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLH 420
++RL G + +++ YM NG++ LR+ L + + + G A G+ YL
Sbjct: 108 IIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVL---QLVGMLRGIAAGMKYL- 163
Query: 421 EQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGTVGHIAPEY 478
N +HRD+ A NIL++ + V DFGL+++L D ++ T+ + + APE
Sbjct: 164 --ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEA 221
Query: 479 LSTGQSSEKTDVFGFGVLLLELIT-GQKAL-DVGNGQVQKGMILDCVRTLHEERRLDVLI 536
+S + + +DV+ FG+++ E++T G++ ++ N +V K I D R
Sbjct: 222 ISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKA-INDGFRL----------- 269
Query: 537 DRDLKGSFDPTELE---KMVQLALQCTQSHPNLRPKMS 571
PT ++ + QL +QC Q RPK +
Sbjct: 270 ---------PTPMDCPSAIYQLMMQCWQQERARRPKFA 298
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 101/212 (47%), Gaps = 11/212 (5%)
Query: 297 ELQIATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLA 356
+ +I G + +G G +G VYKG + V + + P F+ EV ++
Sbjct: 7 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 66
Query: 357 LHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGL 416
H N+L G+ P+ L + GS + + + + IA TA+G+
Sbjct: 67 RHVNILLFMGYSTKPQ--LAIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGM 122
Query: 417 LYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRD-SHVTTAVRGTVGHIA 475
YLH + IIHRD+K+ NI L E +GDFGLA + R SH + G++ +A
Sbjct: 123 DYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 179
Query: 476 PEYLSTGQS---SEKTDVFGFGVLLLELITGQ 504
PE + S ++DV+ FG++L EL+TGQ
Sbjct: 180 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 131/279 (46%), Gaps = 23/279 (8%)
Query: 294 SFRELQIATGNFSPKNILGQGGYGVVYKGCLPN-RMVVAVKRLKDPNFTGEVQFQTEVEM 352
++ + ++ + + K+ LG G YG VY+G + VAVK LK+ E +F E +
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 67
Query: 353 IGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGT 412
+ H NL++L G C ++ +M G++ D LR+ + + ++ +++A
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQI 125
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVG 472
+ + YL ++ IHRD+ A N L+ E+ V DFGL++L+ + +
Sbjct: 126 SSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 182
Query: 473 HIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRL 532
APE L+ + S K+DV+ FGVLL E+ T + G +D +
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG---------IDLSQVYE----- 228
Query: 533 DVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
L+++D + EK+ +L C Q +P+ RP +
Sbjct: 229 --LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFA 265
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 101/212 (47%), Gaps = 11/212 (5%)
Query: 297 ELQIATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLA 356
+ +I G + +G G +G VYKG + V + + P F+ EV ++
Sbjct: 7 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 66
Query: 357 LHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGL 416
H N+L G+ P+ L + GS + + + + IA TA+G+
Sbjct: 67 RHVNILLFMGYSTKPQ--LAIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGM 122
Query: 417 LYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRD-SHVTTAVRGTVGHIA 475
YLH + IIHRD+K+ NI L E +GDFGLA + R SH + G++ +A
Sbjct: 123 DYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 179
Query: 476 PEYLSTGQS---SEKTDVFGFGVLLLELITGQ 504
PE + S ++DV+ FG++L EL+TGQ
Sbjct: 180 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 131/279 (46%), Gaps = 23/279 (8%)
Query: 294 SFRELQIATGNFSPKNILGQGGYGVVYKGCLPN-RMVVAVKRLKDPNFTGEVQFQTEVEM 352
++ + ++ + + K+ LG G YG VY+G + VAVK LK+ E +F E +
Sbjct: 8 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 66
Query: 353 IGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGT 412
+ H NL++L G C ++ +M G++ D LR+ + + ++ +++A
Sbjct: 67 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQI 124
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVG 472
+ + YL ++ IHRD+ A N L+ E+ V DFGL++L+ + +
Sbjct: 125 SSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 181
Query: 473 HIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRL 532
APE L+ + S K+DV+ FGVLL E+ T + G +D +
Sbjct: 182 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG---------IDLSQVYE----- 227
Query: 533 DVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
L+++D + EK+ +L C Q +P+ RP +
Sbjct: 228 --LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFA 264
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 131/279 (46%), Gaps = 23/279 (8%)
Query: 294 SFRELQIATGNFSPKNILGQGGYGVVYKGCLPN-RMVVAVKRLKDPNFTGEVQFQTEVEM 352
++ + ++ + + K+ LG G YG VY+G + VAVK LK+ E +F E +
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 62
Query: 353 IGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGT 412
+ H NL++L G C ++ +M G++ D LR+ + + ++ +++A
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQI 120
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVG 472
+ + YL ++ IHRD+ A N L+ E+ V DFGL++L+ + +
Sbjct: 121 SSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 177
Query: 473 HIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRL 532
APE L+ + S K+DV+ FGVLL E+ T + G +D +
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG---------IDLSQVYE----- 223
Query: 533 DVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
L+++D + EK+ +L C Q +P+ RP +
Sbjct: 224 --LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFA 260
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 130/280 (46%), Gaps = 25/280 (8%)
Query: 294 SFRELQIATGNFSPKNILGQGGYGVVYKGCLPN-RMVVAVKRLKDPNFTGEVQFQTEVEM 352
++ + ++ + + K+ LG G YG VY+G + VAVK LK+ E +F E +
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 62
Query: 353 IGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRD-TRQAKPPLDWNRRMHIALG 411
+ H NL++L G C ++ +M G++ D LR+ RQ + +++A
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAV---VLLYMATQ 119
Query: 412 TARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTV 471
+ + YL ++ IHRD+ A N L+ E+ V DFGL++L+ + +
Sbjct: 120 ISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 176
Query: 472 GHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERR 531
APE L+ + S K+DV+ FGVLL E+ T + G +D +
Sbjct: 177 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG---------IDLSQVYE---- 223
Query: 532 LDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
L+++D + EK+ +L C Q +P+ RP +
Sbjct: 224 ---LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFA 260
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 103/212 (48%), Gaps = 11/212 (5%)
Query: 297 ELQIATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLA 356
+ +I G + +G G +G VYKG + V + + P F+ EV ++
Sbjct: 4 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 63
Query: 357 LHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGL 416
H N+L G+ P+ +V + S+ L + + + + IA TA+G+
Sbjct: 64 RHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIARQTAQGM 119
Query: 417 LYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRD-SHVTTAVRGTVGHIA 475
YLH + IIHRD+K+ NI L E +GDFGLA + R SH + G++ +A
Sbjct: 120 DYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 176
Query: 476 PEYLSTGQS---SEKTDVFGFGVLLLELITGQ 504
PE + S ++DV+ FG++L EL+TGQ
Sbjct: 177 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 208
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 130/280 (46%), Gaps = 25/280 (8%)
Query: 294 SFRELQIATGNFSPKNILGQGGYGVVYKGCLPN-RMVVAVKRLKDPNFTGEVQFQTEVEM 352
++ + ++ + + K+ LG G YG VY+G + VAVK LK+ E +F E +
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 62
Query: 353 IGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRD-TRQAKPPLDWNRRMHIALG 411
+ H NL++L G C ++ +M G++ D LR+ RQ + +++A
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAV---VLLYMATQ 119
Query: 412 TARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTV 471
+ + YL ++ IHRD+ A N L+ E+ V DFGL++L+ + +
Sbjct: 120 ISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 176
Query: 472 GHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERR 531
APE L+ + S K+DV+ FGVLL E+ T + G +D +
Sbjct: 177 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG---------IDLSQVYE---- 223
Query: 532 LDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
L+++D + EK+ +L C Q +P+ RP +
Sbjct: 224 ---LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFA 260
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 131/279 (46%), Gaps = 23/279 (8%)
Query: 294 SFRELQIATGNFSPKNILGQGGYGVVYKGCLPN-RMVVAVKRLKDPNFTGEVQFQTEVEM 352
++ + ++ + + K+ LG G YG VY+G + VAVK LK+ E +F E +
Sbjct: 17 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 75
Query: 353 IGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGT 412
+ H NL++L G C ++ +M G++ D LR+ + + ++ +++A
Sbjct: 76 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQI 133
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVG 472
+ + YL ++ IHRD+ A N L+ E+ V DFGL++L+ + +
Sbjct: 134 SSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 190
Query: 473 HIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRL 532
APE L+ + S K+DV+ FGVLL E+ T + G +D +
Sbjct: 191 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG---------IDLSQVYE----- 236
Query: 533 DVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
L+++D + EK+ +L C Q +P+ RP +
Sbjct: 237 --LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFA 273
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 105/218 (48%), Gaps = 11/218 (5%)
Query: 291 KRFSFRELQIATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEV 350
+R S + +I G + +G G +G VYKG + V + + P F+ EV
Sbjct: 16 RRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEV 75
Query: 351 EMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIAL 410
++ H N+L G+ P+ +V + S+ L + + + + IA
Sbjct: 76 GVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIAR 131
Query: 411 GTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRD-SHVTTAVRG 469
TA+G+ YLH + IIHRD+K+ NI L E +GDFGLA R SH + G
Sbjct: 132 QTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSG 188
Query: 470 TVGHIAPEYLSTGQS---SEKTDVFGFGVLLLELITGQ 504
++ +APE + S ++DV+ FG++L EL+TGQ
Sbjct: 189 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 226
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 101/212 (47%), Gaps = 11/212 (5%)
Query: 297 ELQIATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLA 356
+ +I G + +G G +G VYKG + V + + P F+ EV ++
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 61
Query: 357 LHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGL 416
H N+L G+ P+ L + GS + + + + IA TA+G+
Sbjct: 62 RHVNILLFMGYSTAPQ--LAIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGM 117
Query: 417 LYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRD-SHVTTAVRGTVGHIA 475
YLH + IIHRD+K+ NI L E +GDFGLA + R SH + G++ +A
Sbjct: 118 DYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 174
Query: 476 PEYLSTGQS---SEKTDVFGFGVLLLELITGQ 504
PE + S ++DV+ FG++L EL+TGQ
Sbjct: 175 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 131/279 (46%), Gaps = 23/279 (8%)
Query: 294 SFRELQIATGNFSPKNILGQGGYGVVYKGCLPN-RMVVAVKRLKDPNFTGEVQFQTEVEM 352
++ + ++ + + K+ LG G YG VY+G + VAVK LK+ E +F E +
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 67
Query: 353 IGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGT 412
+ H NL++L G C ++ +M G++ D LR+ + + ++ +++A
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQI 125
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVG 472
+ + YL ++ IHRD+ A N L+ E+ V DFGL++L+ + +
Sbjct: 126 SSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 182
Query: 473 HIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRL 532
APE L+ + S K+DV+ FGVLL E+ T + G +D +
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG---------IDLSQVYE----- 228
Query: 533 DVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
L+++D + EK+ +L C Q +P+ RP +
Sbjct: 229 --LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFA 265
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 105/218 (48%), Gaps = 11/218 (5%)
Query: 291 KRFSFRELQIATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEV 350
+R S + +I G + +G G +G VYKG + V + + P F+ EV
Sbjct: 24 RRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEV 83
Query: 351 EMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIAL 410
++ H N+L G+ P+ +V + S+ L + + + + IA
Sbjct: 84 GVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIAR 139
Query: 411 GTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDR-RDSHVTTAVRG 469
TA+G+ YLH + IIHRD+K+ NI L E +GDFGLA R SH + G
Sbjct: 140 QTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSG 196
Query: 470 TVGHIAPEYLSTGQS---SEKTDVFGFGVLLLELITGQ 504
++ +APE + S ++DV+ FG++L EL+TGQ
Sbjct: 197 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 131/279 (46%), Gaps = 23/279 (8%)
Query: 294 SFRELQIATGNFSPKNILGQGGYGVVYKGCLPN-RMVVAVKRLKDPNFTGEVQFQTEVEM 352
++ + ++ + + K+ LG G YG VY+G + VAVK LK+ E +F E +
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 62
Query: 353 IGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGT 412
+ H NL++L G C ++ +M G++ D LR+ + + ++ +++A
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQI 120
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVG 472
+ + YL ++ IHRD+ A N L+ E+ V DFGL++L+ + +
Sbjct: 121 SSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 177
Query: 473 HIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRL 532
APE L+ + S K+DV+ FGVLL E+ T + G +D +
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG---------IDLSQVYE----- 223
Query: 533 DVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
L+++D + EK+ +L C Q +P+ RP +
Sbjct: 224 --LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFA 260
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 130/280 (46%), Gaps = 25/280 (8%)
Query: 294 SFRELQIATGNFSPKNILGQGGYGVVYKGCLPN-RMVVAVKRLKDPNFTGEVQFQTEVEM 352
++ + ++ + + K+ LG G YG VY+G + VAVK LK+ E +F E +
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 62
Query: 353 IGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRD-TRQAKPPLDWNRRMHIALG 411
+ H NL++L G C ++ +M G++ D LR+ RQ + +++A
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAV---VLLYMATQ 119
Query: 412 TARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTV 471
+ + YL ++ IHRD+ A N L+ E+ V DFGL++L+ + +
Sbjct: 120 ISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 176
Query: 472 GHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERR 531
APE L+ + S K+DV+ FGVLL E+ T + G +D +
Sbjct: 177 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG---------IDLSQVYE---- 223
Query: 532 LDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
L+++D + EK+ +L C Q +P+ RP +
Sbjct: 224 ---LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFA 260
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 131/279 (46%), Gaps = 23/279 (8%)
Query: 294 SFRELQIATGNFSPKNILGQGGYGVVYKGCLPN-RMVVAVKRLKDPNFTGEVQFQTEVEM 352
++ + ++ + + K+ LG G YG VY+G + VAVK LK+ E +F E +
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 64
Query: 353 IGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGT 412
+ H NL++L G C ++ +M G++ D LR+ + + ++ +++A
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQI 122
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVG 472
+ + YL ++ IHRD+ A N L+ E+ V DFGL++L+ + +
Sbjct: 123 SSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 179
Query: 473 HIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRL 532
APE L+ + S K+DV+ FGVLL E+ T + G +D +
Sbjct: 180 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG---------IDLSQVYE----- 225
Query: 533 DVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
L+++D + EK+ +L C Q +P+ RP +
Sbjct: 226 --LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFA 262
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 130/280 (46%), Gaps = 25/280 (8%)
Query: 294 SFRELQIATGNFSPKNILGQGGYGVVYKGCLPN-RMVVAVKRLKDPNFTGEVQFQTEVEM 352
++ + ++ + + K+ LG G YG VY+G + VAVK LK+ E +F E +
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 62
Query: 353 IGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRD-TRQAKPPLDWNRRMHIALG 411
+ H NL++L G C ++ +M G++ D LR+ RQ + +++A
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAV---VLLYMATQ 119
Query: 412 TARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTV 471
+ + YL ++ IHRD+ A N L+ E+ V DFGL++L+ + +
Sbjct: 120 ISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 176
Query: 472 GHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERR 531
APE L+ + S K+DV+ FGVLL E+ T + G +D +
Sbjct: 177 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG---------IDLSQVYE---- 223
Query: 532 LDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
L+++D + EK+ +L C Q +P+ RP +
Sbjct: 224 ---LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFA 260
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 101/212 (47%), Gaps = 11/212 (5%)
Query: 297 ELQIATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLA 356
+ +I G + +G G +G VYKG + V + + P F+ EV ++
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 61
Query: 357 LHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGL 416
H N+L G+ P+ L + GS + + + + IA TA+G+
Sbjct: 62 RHVNILLFMGYSTKPQ--LAIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGM 117
Query: 417 LYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRD-SHVTTAVRGTVGHIA 475
YLH + IIHRD+K+ NI L E +GDFGLA + R SH + G++ +A
Sbjct: 118 DYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 174
Query: 476 PEYLSTGQS---SEKTDVFGFGVLLLELITGQ 504
PE + S ++DV+ FG++L EL+TGQ
Sbjct: 175 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 130/280 (46%), Gaps = 25/280 (8%)
Query: 294 SFRELQIATGNFSPKNILGQGGYGVVYKGCLPN-RMVVAVKRLKDPNFTGEVQFQTEVEM 352
++ + ++ + + K+ LG G YG VY+G + VAVK LK+ E +F E +
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 67
Query: 353 IGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRD-TRQAKPPLDWNRRMHIALG 411
+ H NL++L G C ++ +M G++ D LR+ RQ + +++A
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAV---VLLYMATQ 124
Query: 412 TARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTV 471
+ + YL ++ IHRD+ A N L+ E+ V DFGL++L+ + +
Sbjct: 125 ISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 181
Query: 472 GHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERR 531
APE L+ + S K+DV+ FGVLL E+ T + G +D +
Sbjct: 182 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG---------IDLSQVYE---- 228
Query: 532 LDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
L+++D + EK+ +L C Q +P+ RP +
Sbjct: 229 ---LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFA 265
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 130/280 (46%), Gaps = 25/280 (8%)
Query: 294 SFRELQIATGNFSPKNILGQGGYGVVYKGCLPN-RMVVAVKRLKDPNFTGEVQFQTEVEM 352
S + ++ + + K+ LG G YG VY+G + VAVK LK+ E +F E +
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 60
Query: 353 IGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRD-TRQAKPPLDWNRRMHIALG 411
+ H NL++L G C ++ +M G++ D LR+ RQ + +++A
Sbjct: 61 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAV---VLLYMATQ 117
Query: 412 TARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTV 471
+ + YL ++ IHRD+ A N L+ E+ V DFGL++L+ + +
Sbjct: 118 ISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPI 174
Query: 472 GHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERR 531
APE L+ + S K+DV+ FGVLL E+ T + G Q ++E
Sbjct: 175 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQ----------VYE--- 221
Query: 532 LDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
L+++D + EK+ +L C Q +P+ RP +
Sbjct: 222 ---LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFA 258
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 102/212 (48%), Gaps = 11/212 (5%)
Query: 297 ELQIATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLA 356
+ +I G + +G G +G VYKG + V + + P F+ EV ++
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 61
Query: 357 LHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGL 416
H N+L G+ P+ +V + S+ L + + + + IA TA+G+
Sbjct: 62 RHVNILLFMGYSTKPQ-LAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIARQTAQGM 117
Query: 417 LYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRD-SHVTTAVRGTVGHIA 475
YLH + IIHRD+K+ NI L E +GDFGLA R SH + G++ +A
Sbjct: 118 DYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMA 174
Query: 476 PEYLSTGQS---SEKTDVFGFGVLLLELITGQ 504
PE + S ++DV+ FG++L EL+TGQ
Sbjct: 175 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 130/280 (46%), Gaps = 25/280 (8%)
Query: 294 SFRELQIATGNFSPKNILGQGGYGVVYKGCLPN-RMVVAVKRLKDPNFTGEVQFQTEVEM 352
S + ++ + + K+ LG G +G VY+G + VAVK LK+ E +F E +
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 60
Query: 353 IGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRD-TRQAKPPLDWNRRMHIALG 411
+ H NL++L G C ++ +M G++ D LR+ RQ + +++A
Sbjct: 61 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAV---VLLYMATQ 117
Query: 412 TARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTV 471
+ + YL ++ IHRD+ A N L+ E+ V DFGL++L+ + +
Sbjct: 118 ISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI 174
Query: 472 GHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERR 531
APE L+ + S K+DV+ FGVLL E+ T + G Q ++E
Sbjct: 175 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQ----------VYE--- 221
Query: 532 LDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
L+++D + EK+ +L C Q +P+ RP +
Sbjct: 222 ---LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFA 258
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 131/279 (46%), Gaps = 23/279 (8%)
Query: 294 SFRELQIATGNFSPKNILGQGGYGVVYKGCLPN-RMVVAVKRLKDPNFTGEVQFQTEVEM 352
++ + ++ + + K+ LG G YG VY+G + VAVK LK+ E +F E +
Sbjct: 208 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 266
Query: 353 IGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGT 412
+ H NL++L G C ++ +M G++ D LR+ + + ++ +++A
Sbjct: 267 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQI 324
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVG 472
+ + YL ++ IHR++ A N L+ E+ V DFGL++L+ + +
Sbjct: 325 SSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 381
Query: 473 HIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRL 532
APE L+ + S K+DV+ FGVLL E+ T + G +D +
Sbjct: 382 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG---------IDLSQVYE----- 427
Query: 533 DVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
L+++D + EK+ +L C Q +P+ RP +
Sbjct: 428 --LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFA 464
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 129/284 (45%), Gaps = 33/284 (11%)
Query: 288 GHLKRFSFRELQIATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQ 347
G L ++E+++ + ++G+G +GVV K + V A+K+++ + + F
Sbjct: 1 GSLHMIDYKEIEV-------EEVVGRGAFGVVCKAKWRAKDV-AIKQIE--SESERKAFI 50
Query: 348 TEVEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMH 407
E+ + H N+++LYG C+ P LV Y GS+ + L + P M
Sbjct: 51 VELRQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGA-EPLPYYTAAHAMS 107
Query: 408 IALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAV-VGDFGLAKLLDRRDSHVTTA 466
L ++G+ YLH +IHRD+K N+LL + + DFG A + +H+T
Sbjct: 108 WCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ---THMTNN 164
Query: 467 VRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTL 526
+G+ +APE SEK DVF +G++L E+IT +K D G + M +
Sbjct: 165 -KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMW-----AV 218
Query: 527 HEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKM 570
H R + +K P E L +C P+ RP M
Sbjct: 219 HNGTRPPL-----IKNLPKPIE-----SLMTRCWSKDPSQRPSM 252
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 130/280 (46%), Gaps = 25/280 (8%)
Query: 294 SFRELQIATGNFSPKNILGQGGYGVVYKGCLPN-RMVVAVKRLKDPNFTGEVQFQTEVEM 352
++ + ++ + + K+ LG G YG VY+G + VAVK LK+ E +F E +
Sbjct: 211 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 269
Query: 353 IGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRD-TRQAKPPLDWNRRMHIALG 411
+ H NL++L G C ++ +M G++ D LR+ RQ + +++A
Sbjct: 270 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAV---VLLYMATQ 326
Query: 412 TARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTV 471
+ + YL ++ IHR++ A N L+ E+ V DFGL++L+ + +
Sbjct: 327 ISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 383
Query: 472 GHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERR 531
APE L+ + S K+DV+ FGVLL E+ T + G +D +
Sbjct: 384 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG---------IDLSQVYE---- 430
Query: 532 LDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
L+++D + EK+ +L C Q +P+ RP +
Sbjct: 431 ---LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFA 467
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 131/279 (46%), Gaps = 23/279 (8%)
Query: 294 SFRELQIATGNFSPKNILGQGGYGVVYKGCLPN-RMVVAVKRLKDPNFTGEVQFQTEVEM 352
++ + ++ + + K+ LG G YG VY+G + VAVK LK+ E +F E +
Sbjct: 250 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 308
Query: 353 IGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGT 412
+ H NL++L G C ++ +M G++ D LR+ + + ++ +++A
Sbjct: 309 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQI 366
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVG 472
+ + YL ++ IHR++ A N L+ E+ V DFGL++L+ + +
Sbjct: 367 SSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 423
Query: 473 HIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRL 532
APE L+ + S K+DV+ FGVLL E+ T + G +D +
Sbjct: 424 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG---------IDLSQVYE----- 469
Query: 533 DVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
L+++D + EK+ +L C Q +P+ RP +
Sbjct: 470 --LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFA 506
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 128/282 (45%), Gaps = 33/282 (11%)
Query: 290 LKRFSFRELQIATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTE 349
L ++E+++ + ++G+G +GVV K + VA+K+++ + + F E
Sbjct: 2 LHMIDYKEIEV-------EEVVGRGAFGVVCKAKWRAK-DVAIKQIE--SESERKAFIVE 51
Query: 350 VEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIA 409
+ + H N+++LYG C+ P LV Y GS+ + L + P M
Sbjct: 52 LRQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGA-EPLPYYTAAHAMSWC 108
Query: 410 LGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAV-VGDFGLAKLLDRRDSHVTTAVR 468
L ++G+ YLH +IHRD+K N+LL + + DFG A + +H+T +
Sbjct: 109 LQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ---THMTNN-K 164
Query: 469 GTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHE 528
G+ +APE SEK DVF +G++L E+IT +K D G + M +H
Sbjct: 165 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMW-----AVHN 219
Query: 529 ERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKM 570
R + +K P E L +C P+ RP M
Sbjct: 220 GTRPPL-----IKNLPKPIE-----SLMTRCWSKDPSQRPSM 251
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 99/192 (51%), Gaps = 17/192 (8%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMT 370
LG G +G V+ VAVK +K + + E F E ++ H L++L+ +T
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQHDKLVKLHA-VVT 247
Query: 371 PEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHR 430
E ++ +M GS+ D L+ +K PL + + + A G+ ++ EQ N IHR
Sbjct: 248 KEPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFI-EQRN--YIHR 302
Query: 431 DVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 490
D++AANIL+ S + DFGLA++ + + APE ++ G + K+DV
Sbjct: 303 DLRAANILVSASLVCKIADFGLARV----------GAKFPIKWTAPEAINFGSFTIKSDV 352
Query: 491 FGFGVLLLELIT 502
+ FG+LL+E++T
Sbjct: 353 WSFGILLMEIVT 364
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 99/201 (49%), Gaps = 15/201 (7%)
Query: 311 LGQGGYGVV----YKGCLPNR-MVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLY 365
LG+G +G V Y N VVAVK+L+ F+ E+E++ H N+++
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 366 GFCMTPEER--LLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQC 423
G C + R L+ Y+P GS+ D L+ + K +D + + +G+ YL +
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTK- 138
Query: 424 NPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGTVGHIAPEYLST 481
+ IHRD+ NIL++ +GDFGL K+L D+ V + APE L+
Sbjct: 139 --RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 196
Query: 482 GQSSEKTDVFGFGVLLLELIT 502
+ S +DV+ FGV+L EL T
Sbjct: 197 SKFSVASDVWSFGVVLYELFT 217
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 99/201 (49%), Gaps = 15/201 (7%)
Query: 311 LGQGGYGVV----YKGCLPNR-MVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLY 365
LG+G +G V Y N VVAVK+L+ F+ E+E++ H N+++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 366 GFCMTPEER--LLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQC 423
G C + R L+ Y+P GS+ D L+ + K +D + + +G+ YL +
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTK- 136
Query: 424 NPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGTVGHIAPEYLST 481
+ IHRD+ NIL++ +GDFGL K+L D+ V + APE L+
Sbjct: 137 --RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 194
Query: 482 GQSSEKTDVFGFGVLLLELIT 502
+ S +DV+ FGV+L EL T
Sbjct: 195 SKFSVASDVWSFGVVLYELFT 215
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 99/201 (49%), Gaps = 15/201 (7%)
Query: 311 LGQGGYGVV----YKGCLPNR-MVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLY 365
LG+G +G V Y N VVAVK+L+ F+ E+E++ H N+++
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 366 GFCMTPEER--LLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQC 423
G C + R L+ Y+P GS+ D L+ + K +D + + +G+ YL +
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTK- 139
Query: 424 NPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGTVGHIAPEYLST 481
+ IHRD+ NIL++ +GDFGL K+L D+ V + APE L+
Sbjct: 140 --RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 197
Query: 482 GQSSEKTDVFGFGVLLLELIT 502
+ S +DV+ FGV+L EL T
Sbjct: 198 SKFSVASDVWSFGVVLYELFT 218
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 99/201 (49%), Gaps = 15/201 (7%)
Query: 311 LGQGGYGVV----YKGCLPNR-MVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLY 365
LG+G +G V Y N VVAVK+L+ F+ E+E++ H N+++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 366 GFCMTPEER--LLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQC 423
G C + R L+ Y+P GS+ D L+ + K +D + + +G+ YL +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTK- 133
Query: 424 NPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGTVGHIAPEYLST 481
+ IHRD+ NIL++ +GDFGL K+L D+ V + APE L+
Sbjct: 134 --RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 191
Query: 482 GQSSEKTDVFGFGVLLLELIT 502
+ S +DV+ FGV+L EL T
Sbjct: 192 SKFSVASDVWSFGVVLYELFT 212
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 99/201 (49%), Gaps = 15/201 (7%)
Query: 311 LGQGGYGVV----YKGCLPNR-MVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLY 365
LG+G +G V Y N VVAVK+L+ F+ E+E++ H N+++
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 366 GFCMTPEER--LLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQC 423
G C + R L+ Y+P GS+ D L+ + K +D + + +G+ YL +
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTK- 164
Query: 424 NPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGTVGHIAPEYLST 481
+ IHRD+ NIL++ +GDFGL K+L D+ V + APE L+
Sbjct: 165 --RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 222
Query: 482 GQSSEKTDVFGFGVLLLELIT 502
+ S +DV+ FGV+L EL T
Sbjct: 223 SKFSVASDVWSFGVVLYELFT 243
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 99/201 (49%), Gaps = 15/201 (7%)
Query: 311 LGQGGYGVV----YKGCLPNR-MVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLY 365
LG+G +G V Y N VVAVK+L+ F+ E+E++ H N+++
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 366 GFCMTPEER--LLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQC 423
G C + R L+ Y+P GS+ D L+ + K +D + + +G+ YL +
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTK- 140
Query: 424 NPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGTVGHIAPEYLST 481
+ IHRD+ NIL++ +GDFGL K+L D+ V + APE L+
Sbjct: 141 --RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 198
Query: 482 GQSSEKTDVFGFGVLLLELIT 502
+ S +DV+ FGV+L EL T
Sbjct: 199 SKFSVASDVWSFGVVLYELFT 219
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 99/201 (49%), Gaps = 15/201 (7%)
Query: 311 LGQGGYGVV----YKGCLPNR-MVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLY 365
LG+G +G V Y N VVAVK+L+ F+ E+E++ H N+++
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 366 GFCMTPEER--LLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQC 423
G C + R L+ Y+P GS+ D L+ + K +D + + +G+ YL +
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTK- 151
Query: 424 NPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGTVGHIAPEYLST 481
+ IHRD+ NIL++ +GDFGL K+L D+ V + APE L+
Sbjct: 152 --RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 209
Query: 482 GQSSEKTDVFGFGVLLLELIT 502
+ S +DV+ FGV+L EL T
Sbjct: 210 SKFSVASDVWSFGVVLYELFT 230
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 99/201 (49%), Gaps = 15/201 (7%)
Query: 311 LGQGGYGVV----YKGCLPNR-MVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLY 365
LG+G +G V Y N VVAVK+L+ F+ E+E++ H N+++
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 366 GFCMTPEER--LLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQC 423
G C + R L+ Y+P GS+ D L+ + K +D + + +G+ YL +
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTK- 132
Query: 424 NPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGTVGHIAPEYLST 481
+ IHRD+ NIL++ +GDFGL K+L D+ V + APE L+
Sbjct: 133 --RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 190
Query: 482 GQSSEKTDVFGFGVLLLELIT 502
+ S +DV+ FGV+L EL T
Sbjct: 191 SKFSVASDVWSFGVVLYELFT 211
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 99/201 (49%), Gaps = 15/201 (7%)
Query: 311 LGQGGYGVV----YKGCLPNR-MVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLY 365
LG+G +G V Y N VVAVK+L+ F+ E+E++ H N+++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 366 GFCMTPEER--LLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQC 423
G C + R L+ Y+P GS+ D L+ + K +D + + +G+ YL +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTK- 133
Query: 424 NPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGTVGHIAPEYLST 481
+ IHRD+ NIL++ +GDFGL K+L D+ V + APE L+
Sbjct: 134 --RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 191
Query: 482 GQSSEKTDVFGFGVLLLELIT 502
+ S +DV+ FGV+L EL T
Sbjct: 192 SKFSVASDVWSFGVVLYELFT 212
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 99/201 (49%), Gaps = 15/201 (7%)
Query: 311 LGQGGYGVV----YKGCLPNR-MVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLY 365
LG+G +G V Y N VVAVK+L+ F+ E+E++ H N+++
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 366 GFCMTPEER--LLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQC 423
G C + R L+ Y+P GS+ D L+ + K +D + + +G+ YL +
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTK- 131
Query: 424 NPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGTVGHIAPEYLST 481
+ IHRD+ NIL++ +GDFGL K+L D+ V + APE L+
Sbjct: 132 --RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 189
Query: 482 GQSSEKTDVFGFGVLLLELIT 502
+ S +DV+ FGV+L EL T
Sbjct: 190 SKFSVASDVWSFGVVLYELFT 210
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 99/201 (49%), Gaps = 15/201 (7%)
Query: 311 LGQGGYGVV----YKGCLPNR-MVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLY 365
LG+G +G V Y N VVAVK+L+ F+ E+E++ H N+++
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 366 GFCMTPEER--LLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQC 423
G C + R L+ Y+P GS+ D L+ + K +D + + +G+ YL +
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTK- 151
Query: 424 NPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGTVGHIAPEYLST 481
+ IHRD+ NIL++ +GDFGL K+L D+ V + APE L+
Sbjct: 152 --RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 209
Query: 482 GQSSEKTDVFGFGVLLLELIT 502
+ S +DV+ FGV+L EL T
Sbjct: 210 SKFSVASDVWSFGVVLYELFT 230
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 139/308 (45%), Gaps = 52/308 (16%)
Query: 294 SFRELQIATGNFSPKNI-----LGQGGYGVVYKGC---LPNRM---VVAVKRLKDPNFTG 342
+F+ L+ F KN+ LG+G +G V K L R VAVK LK+
Sbjct: 9 AFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPS 68
Query: 343 EVQ-FQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKP--- 398
E++ +E ++ H ++++LYG C LL+ Y GS+ LR++R+ P
Sbjct: 69 ELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYL 128
Query: 399 ---------PLDWNRRMHIALG--------TARGLLYLHEQCNPKIIHRDVKAANILLDE 441
LD + +G ++G+ YL E K++HRD+ A NIL+ E
Sbjct: 129 GSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILVAE 185
Query: 442 SFEAVVGDFGLAKLLDRRDSHVTTAV-RGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLEL 500
+ + DFGL++ + DS+V + R V +A E L + ++DV+ FGVLL E+
Sbjct: 186 GRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEI 245
Query: 501 ITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCT 560
+T G + + + ++T H R D E+M +L LQC
Sbjct: 246 VTLGGNPYPG---IPPERLFNLLKTGHRMERPDNCS-------------EEMYRLMLQCW 289
Query: 561 QSHPNLRP 568
+ P+ RP
Sbjct: 290 KQEPDKRP 297
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 99/201 (49%), Gaps = 15/201 (7%)
Query: 311 LGQGGYGVV----YKGCLPNR-MVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLY 365
LG+G +G V Y N VVAVK+L+ F+ E+E++ H N+++
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 366 GFCMTPEER--LLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQC 423
G C + R L+ Y+P GS+ D L+ + K +D + + +G+ YL +
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTK- 137
Query: 424 NPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGTVGHIAPEYLST 481
+ IHRD+ NIL++ +GDFGL K+L D+ V + APE L+
Sbjct: 138 --RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 195
Query: 482 GQSSEKTDVFGFGVLLLELIT 502
+ S +DV+ FGV+L EL T
Sbjct: 196 SKFSVASDVWSFGVVLYELFT 216
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 109/230 (47%), Gaps = 18/230 (7%)
Query: 290 LKRFSFRELQIATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTE 349
L L+ G F ++G G YG VYKG +A ++ D E + + E
Sbjct: 11 LDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQE 70
Query: 350 VEMIG-LALHRNLLRLYGFCMTP------EERLLVYPYMPNGSVADCLRDTRQAKPPLDW 402
+ M+ + HRN+ YG + ++ LV + GSV D +++T+ +W
Sbjct: 71 INMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEW 130
Query: 403 NRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSH 462
+I RGL +LH+ K+IHRD+K N+LL E+ E + DFG++ LDR
Sbjct: 131 I--AYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGR 185
Query: 463 VTTAVRGTVGHIAPEYLSTGQSSE-----KTDVFGFGVLLLELITGQKAL 507
T + GT +APE ++ ++ + K+D++ G+ +E+ G L
Sbjct: 186 RNTFI-GTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL 234
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 106/210 (50%), Gaps = 21/210 (10%)
Query: 311 LGQGGYGVVY----KGCLP--NRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRL 364
LG+G +G V+ LP ++M+VAVK LK+ + + FQ E E++ + H++++R
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 365 YGFCMTPEERLLVYPYMPNGSVADCLR----DTR-------QAKPPLDWNRRMHIALGTA 413
+G C L+V+ YM +G + LR D + A PL + + +A A
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 414 RGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSH-VTTAVRGTVG 472
G++YL +HRD+ N L+ + +GDFG+++ + D + V +
Sbjct: 169 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 225
Query: 473 HIAPEYLSTGQSSEKTDVFGFGVLLLELIT 502
+ PE + + + ++DV+ FGV+L E+ T
Sbjct: 226 WMPPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 111/218 (50%), Gaps = 34/218 (15%)
Query: 308 KNILGQGGYGVVYKGCLPN---RMVVAVKRLKD-------PNFTGEVQFQTEVEMIGLAL 357
++++G+G +G V K + RM A+KR+K+ +F GE++ + L
Sbjct: 20 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEV-----LCKLGH 74
Query: 358 HRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTR--QAKPP----------LDWNRR 405
H N++ L G C L Y P+G++ D LR +R + P L +
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 406 MHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV-T 464
+H A ARG+ YL ++ + IHRD+ A NIL+ E++ A + DFGL++ ++ +V
Sbjct: 135 LHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKK 188
Query: 465 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT 502
T R V +A E L+ + +DV+ +GVLL E+++
Sbjct: 189 TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 111/218 (50%), Gaps = 34/218 (15%)
Query: 308 KNILGQGGYGVVYKGCLPN---RMVVAVKRLKD-------PNFTGEVQFQTEVEMIGLAL 357
++++G+G +G V K + RM A+KR+K+ +F GE++ + L
Sbjct: 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEV-----LCKLGH 84
Query: 358 HRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTR--QAKPP----------LDWNRR 405
H N++ L G C L Y P+G++ D LR +R + P L +
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 406 MHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV-T 464
+H A ARG+ YL ++ + IHRD+ A NIL+ E++ A + DFGL++ ++ +V
Sbjct: 145 LHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKK 198
Query: 465 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT 502
T R V +A E L+ + +DV+ +GVLL E+++
Sbjct: 199 TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 106/210 (50%), Gaps = 21/210 (10%)
Query: 311 LGQGGYGVVY----KGCLP--NRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRL 364
LG+G +G V+ LP ++M+VAVK LK+ + + FQ E E++ + H++++R
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 365 YGFCMTPEERLLVYPYMPNGSVADCLR----DTR-------QAKPPLDWNRRMHIALGTA 413
+G C L+V+ YM +G + LR D + A PL + + +A A
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 414 RGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSH-VTTAVRGTVG 472
G++YL +HRD+ N L+ + +GDFG+++ + D + V +
Sbjct: 146 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 202
Query: 473 HIAPEYLSTGQSSEKTDVFGFGVLLLELIT 502
+ PE + + + ++DV+ FGV+L E+ T
Sbjct: 203 WMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 106/210 (50%), Gaps = 21/210 (10%)
Query: 311 LGQGGYGVVY----KGCLP--NRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRL 364
LG+G +G V+ LP ++M+VAVK LK+ + + FQ E E++ + H++++R
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 365 YGFCMTPEERLLVYPYMPNGSVADCLR----DTR-------QAKPPLDWNRRMHIALGTA 413
+G C L+V+ YM +G + LR D + A PL + + +A A
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 414 RGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSH-VTTAVRGTVG 472
G++YL +HRD+ N L+ + +GDFG+++ + D + V +
Sbjct: 140 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 196
Query: 473 HIAPEYLSTGQSSEKTDVFGFGVLLLELIT 502
+ PE + + + ++DV+ FGV+L E+ T
Sbjct: 197 WMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 96/219 (43%), Gaps = 14/219 (6%)
Query: 299 QIATGNFSPKNILGQGGYGVVYKGCLPN-RMVVAVKRLKDPNFTG---EVQFQTEVEMIG 354
Q A +F LG+G +G VY N + ++A+K L E Q + EVE+
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 355 LALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTAR 414
H N+LRLYG+ L+ Y P G+V L Q D R A
Sbjct: 64 HLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELAN 119
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHI 474
L Y H + K+IHRD+K N+LL + E + DFG + S A+ GT+ ++
Sbjct: 120 ALSYCHSK---KVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRAALCGTLDYL 173
Query: 475 APEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQ 513
PE + EK D++ GVL E + G+ + Q
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 212
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 138/308 (44%), Gaps = 52/308 (16%)
Query: 294 SFRELQIATGNFSPKNI-----LGQGGYGVVYKGC---LPNRM---VVAVKRLKDPNFTG 342
+F+ L+ F KN+ LG+G +G V K L R VAVK LK+
Sbjct: 9 AFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPS 68
Query: 343 EVQ-FQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKP--- 398
E++ +E ++ H ++++LYG C LL+ Y GS+ LR++R+ P
Sbjct: 69 ELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYL 128
Query: 399 ---------PLDWNRRMHIALG--------TARGLLYLHEQCNPKIIHRDVKAANILLDE 441
LD + +G ++G+ YL E K++HRD+ A NIL+ E
Sbjct: 129 GSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILVAE 185
Query: 442 SFEAVVGDFGLAKLLDRRDSHVTTAV-RGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLEL 500
+ + DFGL++ + DS V + R V +A E L + ++DV+ FGVLL E+
Sbjct: 186 GRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEI 245
Query: 501 ITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCT 560
+T G + + + ++T H R D E+M +L LQC
Sbjct: 246 VTLGGNPYPG---IPPERLFNLLKTGHRMERPDNCS-------------EEMYRLMLQCW 289
Query: 561 QSHPNLRP 568
+ P+ RP
Sbjct: 290 KQEPDKRP 297
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 99/201 (49%), Gaps = 15/201 (7%)
Query: 311 LGQGGYGVV----YKGCLPNR-MVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLY 365
LG+G +G V Y N VVAVK+L+ F+ E+E++ H N+++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 366 GFCMTPEER--LLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQC 423
G C + R L+ Y+P GS+ D L+ + K +D + + +G+ YL +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTK- 133
Query: 424 NPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGTVGHIAPEYLST 481
+ IHRD+ NIL++ +GDFGL K+L D+ V + APE L+
Sbjct: 134 --RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTE 191
Query: 482 GQSSEKTDVFGFGVLLLELIT 502
+ S +DV+ FGV+L EL T
Sbjct: 192 SKFSVASDVWSFGVVLYELFT 212
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 97/194 (50%), Gaps = 11/194 (5%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMT 370
LG G +GVV G + VAVK +K+ + + + FQ M+ L+ H L++ YG C
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLS-HPKLVKFYGVCSK 74
Query: 371 PEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHR 430
+V Y+ NG + + LR + P ++ + + G+ +L + IHR
Sbjct: 75 EYPIYIVTEYISNGCLLNYLRSHGKGLEP---SQLLEMCYDVCEGMAFLESH---QFIHR 128
Query: 431 DVKAANILLDESFEAVVGDFGLAK-LLDRRDSHVTTA-VRGTVGHIAPEYLSTGQSSEKT 488
D+ A N L+D V DFG+ + +LD D +V++ + V APE + S K+
Sbjct: 129 DLAARNCLVDRDLCVKVSDFGMTRYVLD--DQYVSSVGTKFPVKWSAPEVFHYFKYSSKS 186
Query: 489 DVFGFGVLLLELIT 502
DV+ FG+L+ E+ +
Sbjct: 187 DVWAFGILMWEVFS 200
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 98/202 (48%), Gaps = 17/202 (8%)
Query: 311 LGQGGYGVV----YKGCLPNR-MVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLY 365
LG+G +G V Y N VVAVK+L+ F+ E+E++ H N+++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 366 GFCMTPEER--LLVYPYMPNGSVADCLRDTRQAKPP-LDWNRRMHIALGTARGLLYLHEQ 422
G C + R L+ Y+P GS LRD QA +D + + +G+ YL +
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGS----LRDYLQAHAERIDHIKLLQYTSQICKGMEYLGTK 136
Query: 423 CNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGTVGHIAPEYLS 480
+ IHRD+ NIL++ +GDFGL K+L D+ V + APE L+
Sbjct: 137 ---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 481 TGQSSEKTDVFGFGVLLLELIT 502
+ S +DV+ FGV+L EL T
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT 215
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 97/222 (43%), Gaps = 14/222 (6%)
Query: 296 RELQIATGNFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFTG---EVQFQTEVE 351
++ Q A +F LG+G +G VY ++ ++A+K L E Q + EVE
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 352 MIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALG 411
+ H N+LRLYG+ L+ Y P G V L Q D R
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL----QKLSKFDEQRTATYITE 121
Query: 412 TARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTV 471
A L Y H + ++IHRD+K N+LL + E + DFG + S T + GT+
Sbjct: 122 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTL 175
Query: 472 GHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQ 513
++ PE + EK D++ GVL E + G+ + Q
Sbjct: 176 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 217
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 101/221 (45%), Gaps = 35/221 (15%)
Query: 311 LGQGGYGVVYKGCLP----NRMVVAVKRLKDPNFTGEVQ----FQTEVEMIGLALHRNLL 362
LG G +GVV +G + VAVK LK P+ + + F EV + HRNL+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLK-PDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 363 RLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGT--------AR 414
RLYG +TP ++ V P GS+ D LR + H LGT A
Sbjct: 79 RLYGVVLTPPMKM-VTELAPLGSLLDRLR-----------KHQGHFLLGTLSRYAVQVAE 126
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTV--G 472
G+ YL + + IHRD+ A N+LL +GDFGL + L + D H V
Sbjct: 127 GMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA 183
Query: 473 HIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNG 512
APE L T S +D + FGV L E+ T GQ+ NG
Sbjct: 184 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG 224
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 99/201 (49%), Gaps = 15/201 (7%)
Query: 311 LGQGGYGVV----YKGCLPNR-MVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLY 365
LG+G +G V Y N VVAVK+L+ F+ E+E++ H N+++
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 366 GFCMTPEER--LLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQC 423
G C + R L+ Y+P GS+ D L+ + K +D + + +G+ YL +
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTK- 134
Query: 424 NPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGTVGHIAPEYLST 481
+ IHR++ NIL++ +GDFGL K+L D+ V + APE L+
Sbjct: 135 --RYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTE 192
Query: 482 GQSSEKTDVFGFGVLLLELIT 502
+ S +DV+ FGV+L EL T
Sbjct: 193 SKFSVASDVWSFGVVLYELFT 213
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 108/224 (48%), Gaps = 24/224 (10%)
Query: 285 FDVGHLKRFSFRELQIATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEV 344
F+ HLK S Q+ GNF + G +VAVK+L+ +
Sbjct: 4 FEERHLKYIS----QLGKGNFGSVELCRYDPLGDNTGA------LVAVKQLQHSGPDQQR 53
Query: 345 QFQTEVEMIGLALHRNLLRLY-GFCMTP--EERLLVYPYMPNGSVADCLRDTRQA-KPPL 400
FQ E++++ ALH + + Y G P E LV Y+P+G CLRD Q + L
Sbjct: 54 DFQREIQILK-ALHSDFIVKYRGVSYGPGRPELRLVMEYLPSG----CLRDFLQRHRARL 108
Query: 401 DWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKL--LDR 458
D +R + + +G+ YL + + +HRD+ A NIL++ + DFGLAKL LD+
Sbjct: 109 DASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK 165
Query: 459 RDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT 502
V + + APE LS S ++DV+ FGV+L EL T
Sbjct: 166 DXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 111/218 (50%), Gaps = 34/218 (15%)
Query: 308 KNILGQGGYGVVYKGCLPN---RMVVAVKRLKD-------PNFTGEVQFQTEVEMIGLAL 357
++++G+G +G V K + RM A+KR+K+ +F GE++ + L
Sbjct: 27 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEV-----LCKLGH 81
Query: 358 HRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTR--QAKPP----------LDWNRR 405
H N++ L G C L Y P+G++ D LR +R + P L +
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 406 MHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTT 465
+H A ARG+ YL ++ + IHR++ A NIL+ E++ A + DFGL++ ++ +V
Sbjct: 142 LHFAADVARGMDYLSQK---QFIHRNLAARNILVGENYVAKIADFGLSR---GQEVYVKK 195
Query: 466 AV-RGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT 502
+ R V +A E L+ + +DV+ +GVLL E+++
Sbjct: 196 TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 108/207 (52%), Gaps = 26/207 (12%)
Query: 309 NILGQGGYGVVYKGC-LPN----RMVVAVKRLKDPNFTGEVQFQTEVE---MIGLALHRN 360
+LG G +G V+KG +P ++ V +K ++D +G FQ + IG H +
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDK--SGRQSFQAVTDHMLAIGSLDHAH 94
Query: 361 LLRLYGFCMTPEERL-LVYPYMPNGSVADCLRDTRQAKPP---LDWNRRMHIALGTARGL 416
++RL G C P L LV Y+P GS+ D +R R A P L+W ++ A+G+
Sbjct: 95 IVRLLGLC--PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI------AKGM 146
Query: 417 LYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSH-VTTAVRGTVGHIA 475
YL E ++HR++ A N+LL + V DFG+A LL D + + + + +A
Sbjct: 147 YYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMA 203
Query: 476 PEYLSTGQSSEKTDVFGFGVLLLELIT 502
E + G+ + ++DV+ +GV + EL+T
Sbjct: 204 LESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 108/207 (52%), Gaps = 26/207 (12%)
Query: 309 NILGQGGYGVVYKGC-LPN----RMVVAVKRLKDPNFTGEVQFQTEVE---MIGLALHRN 360
+LG G +G V+KG +P ++ V +K ++D +G FQ + IG H +
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDK--SGRQSFQAVTDHMLAIGSLDHAH 76
Query: 361 LLRLYGFCMTPEERL-LVYPYMPNGSVADCLRDTRQAKPP---LDWNRRMHIALGTARGL 416
++RL G C P L LV Y+P GS+ D +R R A P L+W ++ A+G+
Sbjct: 77 IVRLLGLC--PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI------AKGM 128
Query: 417 LYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSH-VTTAVRGTVGHIA 475
YL E ++HR++ A N+LL + V DFG+A LL D + + + + +A
Sbjct: 129 YYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMA 185
Query: 476 PEYLSTGQSSEKTDVFGFGVLLLELIT 502
E + G+ + ++DV+ +GV + EL+T
Sbjct: 186 LESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 101/221 (45%), Gaps = 35/221 (15%)
Query: 311 LGQGGYGVVYKGCLP----NRMVVAVKRLKDPNFTGEVQ----FQTEVEMIGLALHRNLL 362
LG G +GVV +G + VAVK LK P+ + + F EV + HRNL+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLK-PDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 363 RLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGT--------AR 414
RLYG +TP ++ V P GS+ D LR + H LGT A
Sbjct: 75 RLYGVVLTPPMKM-VTELAPLGSLLDRLR-----------KHQGHFLLGTLSRYAVQVAE 122
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTV--G 472
G+ YL + + IHRD+ A N+LL +GDFGL + L + D H V
Sbjct: 123 GMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFA 179
Query: 473 HIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNG 512
APE L T S +D + FGV L E+ T GQ+ NG
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG 220
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 101/221 (45%), Gaps = 35/221 (15%)
Query: 311 LGQGGYGVVYKGCLP----NRMVVAVKRLKDPNFTGEVQ----FQTEVEMIGLALHRNLL 362
LG G +GVV +G + VAVK LK P+ + + F EV + HRNL+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLK-PDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 363 RLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGT--------AR 414
RLYG +TP ++ V P GS+ D LR + H LGT A
Sbjct: 79 RLYGVVLTPPMKM-VTELAPLGSLLDRLR-----------KHQGHFLLGTLSRYAVQVAE 126
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTV--G 472
G+ YL + + IHRD+ A N+LL +GDFGL + L + D H V
Sbjct: 127 GMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA 183
Query: 473 HIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNG 512
APE L T S +D + FGV L E+ T GQ+ NG
Sbjct: 184 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG 224
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 101/221 (45%), Gaps = 35/221 (15%)
Query: 311 LGQGGYGVVYKGCLP----NRMVVAVKRLKDPNFTGEVQ----FQTEVEMIGLALHRNLL 362
LG G +GVV +G + VAVK LK P+ + + F EV + HRNL+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLK-PDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 363 RLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGT--------AR 414
RLYG +TP ++ V P GS+ D LR + H LGT A
Sbjct: 75 RLYGVVLTPPMKM-VTELAPLGSLLDRLR-----------KHQGHFLLGTLSRYAVQVAE 122
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTV--G 472
G+ YL + + IHRD+ A N+LL +GDFGL + L + D H V
Sbjct: 123 GMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA 179
Query: 473 HIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNG 512
APE L T S +D + FGV L E+ T GQ+ NG
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG 220
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 137/308 (44%), Gaps = 52/308 (16%)
Query: 294 SFRELQIATGNFSPKNI-----LGQGGYGVVYKGC---LPNRM---VVAVKRLKDPNFTG 342
+F+ L+ F KN+ LG+G +G V K L R VAVK LK+
Sbjct: 9 AFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPS 68
Query: 343 EVQ-FQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKP--- 398
E++ +E ++ H ++++LYG C LL+ Y GS+ LR++R+ P
Sbjct: 69 ELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYL 128
Query: 399 ---------PLDWNRRMHIALG--------TARGLLYLHEQCNPKIIHRDVKAANILLDE 441
LD + +G ++G+ YL E ++HRD+ A NIL+ E
Sbjct: 129 GSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMS---LVHRDLAARNILVAE 185
Query: 442 SFEAVVGDFGLAKLLDRRDSHVTTAV-RGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLEL 500
+ + DFGL++ + DS V + R V +A E L + ++DV+ FGVLL E+
Sbjct: 186 GRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEI 245
Query: 501 ITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCT 560
+T G + + + ++T H R D E+M +L LQC
Sbjct: 246 VTLGGNPYPG---IPPERLFNLLKTGHRMERPDNCS-------------EEMYRLMLQCW 289
Query: 561 QSHPNLRP 568
+ P+ RP
Sbjct: 290 KQEPDKRP 297
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 101/221 (45%), Gaps = 35/221 (15%)
Query: 311 LGQGGYGVVYKGCLP----NRMVVAVKRLKDPNFTGEVQ----FQTEVEMIGLALHRNLL 362
LG G +GVV +G + VAVK LK P+ + + F EV + HRNL+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLK-PDVLSQPEAMDDFIREVNAMHSLDHRNLI 84
Query: 363 RLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGT--------AR 414
RLYG +TP ++ V P GS+ D LR + H LGT A
Sbjct: 85 RLYGVVLTPPMKM-VTELAPLGSLLDRLR-----------KHQGHFLLGTLSRYAVQVAE 132
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTV--G 472
G+ YL + + IHRD+ A N+LL +GDFGL + L + D H V
Sbjct: 133 GMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA 189
Query: 473 HIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNG 512
APE L T S +D + FGV L E+ T GQ+ NG
Sbjct: 190 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG 230
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 99/201 (49%), Gaps = 15/201 (7%)
Query: 311 LGQGGYGVV----YKGCLPNR-MVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLY 365
LG+G +G V Y N VVAVK+L+ F+ E+E++ H N+++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 366 GFCMTPEER--LLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQC 423
G C + R L+ ++P GS+ + L+ + K +D + + +G+ YL +
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTK- 136
Query: 424 NPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGTVGHIAPEYLST 481
+ IHRD+ NIL++ +GDFGL K+L D+ V + APE L+
Sbjct: 137 --RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 194
Query: 482 GQSSEKTDVFGFGVLLLELIT 502
+ S +DV+ FGV+L EL T
Sbjct: 195 SKFSVASDVWSFGVVLYELFT 215
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 98/222 (44%), Gaps = 14/222 (6%)
Query: 296 RELQIATGNFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFTG---EVQFQTEVE 351
++ Q A +F LG+G +G VY ++ ++A+K L E Q + EVE
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 352 MIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALG 411
+ H N+LRLYG+ L+ Y P G+V L Q D R
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITE 117
Query: 412 TARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTV 471
A L Y H + ++IHRD+K N+LL + E + DFG + S T + GT+
Sbjct: 118 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS---CHAPSSRRTTLSGTL 171
Query: 472 GHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQ 513
++ PE + EK D++ GVL E + G+ + Q
Sbjct: 172 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 213
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 98/226 (43%), Gaps = 22/226 (9%)
Query: 296 RELQIATGNFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFTG---EVQFQTEVE 351
++ Q A +F LG+G +G VY ++ ++A+K L E Q + EVE
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 352 MIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALG 411
+ H N+LRLYG+ L+ Y P G V L Q D R
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL----QKLSKFDEQRTATYITE 121
Query: 412 TARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVR--- 468
A L Y H + ++IHRD+K N+LL + E + DFG + H ++ R
Sbjct: 122 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRXXL 171
Query: 469 -GTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQ 513
GT+ ++ PE + EK D++ GVL E + G+ + Q
Sbjct: 172 XGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 217
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 101/221 (45%), Gaps = 35/221 (15%)
Query: 311 LGQGGYGVVYKGCLP----NRMVVAVKRLKDPNFTGEVQ----FQTEVEMIGLALHRNLL 362
LG G +GVV +G + VAVK LK P+ + + F EV + HRNL+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLK-PDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 363 RLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGT--------AR 414
RLYG +TP ++ V P GS+ D LR + H LGT A
Sbjct: 75 RLYGVVLTPPMKM-VTELAPLGSLLDRLR-----------KHQGHFLLGTLSRYAVQVAE 122
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTV--G 472
G+ YL + + IHRD+ A N+LL +GDFGL + L + D H V
Sbjct: 123 GMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA 179
Query: 473 HIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNG 512
APE L T S +D + FGV L E+ T GQ+ NG
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG 220
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 95/219 (43%), Gaps = 14/219 (6%)
Query: 299 QIATGNFSPKNILGQGGYGVVYKGCLPNR-MVVAVKRLKDPNFTG---EVQFQTEVEMIG 354
Q A +F LG+G +G VY R ++A+K L E Q + EVE+
Sbjct: 1 QWALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQS 60
Query: 355 LALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTAR 414
H N+LRLYG+ L+ Y P G+V L Q D R A
Sbjct: 61 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELAN 116
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHI 474
L Y H + ++IHRD+K N+LL + E + DFG + S T + GT+ ++
Sbjct: 117 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYL 170
Query: 475 APEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQ 513
PE + EK D++ GVL E + G+ + Q
Sbjct: 171 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 209
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 101/221 (45%), Gaps = 35/221 (15%)
Query: 311 LGQGGYGVVYKGCLP----NRMVVAVKRLKDPNFTGEVQ----FQTEVEMIGLALHRNLL 362
LG G +GVV +G + VAVK LK P+ + + F EV + HRNL+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLK-PDVLSQPEAMDDFIREVNAMHSLDHRNLI 84
Query: 363 RLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGT--------AR 414
RLYG +TP ++ V P GS+ D LR + H LGT A
Sbjct: 85 RLYGVVLTPPMKM-VTELAPLGSLLDRLR-----------KHQGHFLLGTLSRYAVQVAE 132
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTV--G 472
G+ YL + + IHRD+ A N+LL +GDFGL + L + D H V
Sbjct: 133 GMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFA 189
Query: 473 HIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNG 512
APE L T S +D + FGV L E+ T GQ+ NG
Sbjct: 190 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG 230
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 98/222 (44%), Gaps = 14/222 (6%)
Query: 296 RELQIATGNFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFTG---EVQFQTEVE 351
++ Q A +F LG+G +G VY ++ ++A+K L E Q + EVE
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 352 MIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALG 411
+ H N+LRLYG+ L+ Y P G+V L Q D R
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITE 119
Query: 412 TARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTV 471
A L Y H + ++IHRD+K N+LL + E + DFG + S T + GT+
Sbjct: 120 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTL 173
Query: 472 GHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQ 513
++ PE + EK D++ GVL E + G+ + Q
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 215
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 98/222 (44%), Gaps = 14/222 (6%)
Query: 296 RELQIATGNFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFTG---EVQFQTEVE 351
++ Q A +F LG+G +G VY ++ ++A+K L E Q + EVE
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 352 MIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALG 411
+ H N+LRLYG+ L+ Y P G+V L Q D R
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITE 121
Query: 412 TARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTV 471
A L Y H + ++IHRD+K N+LL + E + DFG + S T + GT+
Sbjct: 122 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTL 175
Query: 472 GHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQ 513
++ PE + EK D++ GVL E + G+ + Q
Sbjct: 176 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 217
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 100/224 (44%), Gaps = 18/224 (8%)
Query: 296 RELQIATGNFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFTG---EVQFQTEVE 351
++ Q A +F LG+G +G VY ++ ++A+K L E Q + EVE
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 352 MIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALG 411
+ H N+LRLYG+ L+ Y P G+V L Q D R
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITE 117
Query: 412 TARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLA--KLLDRRDSHVTTAVRG 469
A L Y H + ++IHRD+K N+LL + E + DFG + RRD+ + G
Sbjct: 118 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDT-----LCG 169
Query: 470 TVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQ 513
T+ ++ PE + EK D++ GVL E + G+ + Q
Sbjct: 170 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 213
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 134/281 (47%), Gaps = 33/281 (11%)
Query: 299 QIATGNFSPKNILGQGGYGVVYKG--CLPNR--MVVAVKRLKDPNFTGEVQ--FQTEVEM 352
++ N S ++G G +G V G LP++ + VA+K LK +T + + F E +
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEASI 99
Query: 353 IGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGT 412
+G H N++RL G + ++V YM NGS+ LR + + + + G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR---KHDAQFTVIQLVGMLRGI 156
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGT 470
A G+ YL + +HRD+ A NIL++ + V DFGLA++L D ++ T +
Sbjct: 157 ASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIP 213
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNGQVQKGMILDCVRTLHEE 529
+ +PE ++ + + +DV+ +G++L E+++ G++ + Q D ++ + E
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-------DVIKAVDEG 266
Query: 530 RRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKM 570
RL +D P L QL L C Q N RPK
Sbjct: 267 YRLPPPMDC-------PAAL---YQLMLDCWQKDRNNRPKF 297
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 99/222 (44%), Gaps = 14/222 (6%)
Query: 296 RELQIATGNFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFTG---EVQFQTEVE 351
++ Q A +F LG+G +G VY ++ ++A+K L E Q + EVE
Sbjct: 27 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 86
Query: 352 MIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALG 411
+ H N+LRLYG+ L+ Y P G+V L+ + D R
Sbjct: 87 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITE 142
Query: 412 TARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTV 471
A L Y H + ++IHRD+K N+LL + E + DFG + S T + GT+
Sbjct: 143 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTL 196
Query: 472 GHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQ 513
++ PE + EK D++ GVL E + G+ + Q
Sbjct: 197 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 238
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 98/222 (44%), Gaps = 14/222 (6%)
Query: 296 RELQIATGNFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFTG---EVQFQTEVE 351
++ Q A +F LG+G +G VY ++ ++A+K L E Q + EVE
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 352 MIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALG 411
+ H N+LRLYG+ L+ Y P G+V L Q D R
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITE 121
Query: 412 TARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTV 471
A L Y H + ++IHRD+K N+LL + E + DFG + S T + GT+
Sbjct: 122 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTL 175
Query: 472 GHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQ 513
++ PE + EK D++ GVL E + G+ + Q
Sbjct: 176 DYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 217
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 12/210 (5%)
Query: 298 LQIATGNFSPKNI-----LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEM 352
L + PK++ LG G +GVV G + VA+K +K+ + + E +F E ++
Sbjct: 14 LGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-EDEFIEEAKV 72
Query: 353 IGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGT 412
+ H L++LYG C ++ YM NG + + LR+ R + + +
Sbjct: 73 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR---FQTQQLLEMCKDV 129
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVG 472
+ YL + + +HRD+ A N L+++ V DFGL++ + + + + V
Sbjct: 130 CEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVR 186
Query: 473 HIAPEYLSTGQSSEKTDVFGFGVLLLELIT 502
PE L + S K+D++ FGVL+ E+ +
Sbjct: 187 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 96/219 (43%), Gaps = 14/219 (6%)
Query: 299 QIATGNFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFTG---EVQFQTEVEMIG 354
Q A +F LG+G +G VY ++ ++A+K L E Q + EVE+
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 355 LALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTAR 414
H N+LRLYG+ L+ Y P G+V L Q D R A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELAN 119
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHI 474
L Y H + ++IHRD+K N+LL + E + DFG + S T + GT+ ++
Sbjct: 120 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYL 173
Query: 475 APEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQ 513
PE + EK D++ GVL E + G+ + Q
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 212
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 98/222 (44%), Gaps = 14/222 (6%)
Query: 296 RELQIATGNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNFTG---EVQFQTEVE 351
++ Q A +F LG+G +G VY ++ ++A+K L E Q + EVE
Sbjct: 18 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 77
Query: 352 MIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALG 411
+ H N+LRLYG+ L+ Y P G+V L Q D R
Sbjct: 78 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITE 133
Query: 412 TARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTV 471
A L Y H + ++IHRD+K N+LL + E + DFG + S T + GT+
Sbjct: 134 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTL 187
Query: 472 GHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQ 513
++ PE + EK D++ GVL E + G+ + Q
Sbjct: 188 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 229
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 99/226 (43%), Gaps = 22/226 (9%)
Query: 296 RELQIATGNFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFTG---EVQFQTEVE 351
++ Q A +F LG+G +G VY ++ ++A+K L E Q + EVE
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 352 MIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALG 411
+ H N+LRLYG+ L+ Y P G+V L Q D R
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITE 117
Query: 412 TARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVR--- 468
A L Y H + ++IHRD+K N+LL + E + DFG + H ++ R
Sbjct: 118 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTDL 167
Query: 469 -GTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQ 513
GT+ ++ PE + EK D++ GVL E + G+ + Q
Sbjct: 168 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 213
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 99/226 (43%), Gaps = 22/226 (9%)
Query: 296 RELQIATGNFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFTG---EVQFQTEVE 351
++ Q A +F LG+G +G VY ++ ++A+K L E Q + EVE
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 352 MIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALG 411
+ H N+LRLYG+ L+ Y P G+V L Q D R
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITE 121
Query: 412 TARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVR--- 468
A L Y H + ++IHRD+K N+LL + E + DFG + H ++ R
Sbjct: 122 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTDL 171
Query: 469 -GTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQ 513
GT+ ++ PE + EK D++ GVL E + G+ + Q
Sbjct: 172 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 217
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 98/222 (44%), Gaps = 14/222 (6%)
Query: 296 RELQIATGNFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFTG---EVQFQTEVE 351
++ Q A +F LG+G +G VY ++ ++A+K L E Q + EVE
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 352 MIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALG 411
+ H N+LRLYG+ L+ Y P G+V L Q D R
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITE 119
Query: 412 TARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTV 471
A L Y H + ++IHRD+K N+LL + E + DFG + S T + GT+
Sbjct: 120 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTL 173
Query: 472 GHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQ 513
++ PE + EK D++ GVL E + G+ + Q
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 215
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 99/226 (43%), Gaps = 22/226 (9%)
Query: 296 RELQIATGNFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFTG---EVQFQTEVE 351
++ Q A +F LG+G +G VY ++ ++A+K L E Q + EVE
Sbjct: 1 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 352 MIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALG 411
+ H N+LRLYG+ L+ Y P G+V L Q D R
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITE 116
Query: 412 TARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVR--- 468
A L Y H + ++IHRD+K N+LL + E + DFG + H ++ R
Sbjct: 117 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTDL 166
Query: 469 -GTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQ 513
GT+ ++ PE + EK D++ GVL E + G+ + Q
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 212
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 96/219 (43%), Gaps = 14/219 (6%)
Query: 299 QIATGNFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFTG---EVQFQTEVEMIG 354
Q A +F LG+G +G VY ++ ++A+K L E Q + EVE+
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 355 LALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTAR 414
H N+LRLYG+ L+ Y P G+V L Q D R A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELAN 119
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHI 474
L Y H + ++IHRD+K N+LL + E + DFG + S T + GT+ ++
Sbjct: 120 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTELCGTLDYL 173
Query: 475 APEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQ 513
PE + EK D++ GVL E + G+ + Q
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 212
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 99/226 (43%), Gaps = 22/226 (9%)
Query: 296 RELQIATGNFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFTG---EVQFQTEVE 351
++ Q A +F LG+G +G VY ++ ++A+K L E Q + EVE
Sbjct: 3 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 62
Query: 352 MIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALG 411
+ H N+LRLYG+ L+ Y P G+V L Q D R
Sbjct: 63 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITE 118
Query: 412 TARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVR--- 468
A L Y H + ++IHRD+K N+LL + E + DFG + H ++ R
Sbjct: 119 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRXXL 168
Query: 469 -GTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQ 513
GT+ ++ PE + EK D++ GVL E + G+ + Q
Sbjct: 169 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 214
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 100/226 (44%), Gaps = 22/226 (9%)
Query: 296 RELQIATGNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNFTG---EVQFQTEVE 351
++ Q A +F LG+G +G VY ++ ++A+K L E Q + EVE
Sbjct: 27 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 86
Query: 352 MIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALG 411
+ H N+LRLYG+ L+ Y P G+V L+ + D R
Sbjct: 87 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITE 142
Query: 412 TARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVR--- 468
A L Y H + ++IHRD+K N+LL + E + DFG + H ++ R
Sbjct: 143 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRDDL 192
Query: 469 -GTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQ 513
GT+ ++ PE + EK D++ GVL E + G+ + Q
Sbjct: 193 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 238
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 96/219 (43%), Gaps = 14/219 (6%)
Query: 299 QIATGNFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFTG---EVQFQTEVEMIG 354
Q A +F LG+G +G VY ++ ++A+K L E Q + EVE+
Sbjct: 3 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 62
Query: 355 LALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTAR 414
H N+LRLYG+ L+ Y P G+V L Q D R A
Sbjct: 63 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELAN 118
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHI 474
L Y H + ++IHRD+K N+LL + E + DFG + S T + GT+ ++
Sbjct: 119 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYL 172
Query: 475 APEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQ 513
PE + EK D++ GVL E + G+ + Q
Sbjct: 173 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 211
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 99/226 (43%), Gaps = 22/226 (9%)
Query: 296 RELQIATGNFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFTG---EVQFQTEVE 351
++ Q A +F LG+G +G VY ++ ++A+K L E Q + EVE
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 352 MIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALG 411
+ H N+LRLYG+ L+ Y P G+V L Q D R
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITE 119
Query: 412 TARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVR--- 468
A L Y H + ++IHRD+K N+LL + E + DFG + H ++ R
Sbjct: 120 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRXXL 169
Query: 469 -GTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQ 513
GT+ ++ PE + EK D++ GVL E + G+ + Q
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 215
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 96/219 (43%), Gaps = 14/219 (6%)
Query: 299 QIATGNFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFTG---EVQFQTEVEMIG 354
Q A +F LG+G +G VY ++ ++A+K L E Q + EVE+
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 355 LALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTAR 414
H N+LRLYG+ L+ Y P G+V L Q D R A
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELAN 122
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHI 474
L Y H + ++IHRD+K N+LL + E + DFG + S A+ GT+ ++
Sbjct: 123 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRAALCGTLDYL 176
Query: 475 APEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQ 513
PE + EK D++ GVL E + G+ + Q
Sbjct: 177 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 215
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 96/219 (43%), Gaps = 14/219 (6%)
Query: 299 QIATGNFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFTG---EVQFQTEVEMIG 354
Q A +F LG+G +G VY ++ ++A+K L E Q + EVE+
Sbjct: 8 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 67
Query: 355 LALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTAR 414
H N+LRLYG+ L+ Y P G+V L Q D R A
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELAN 123
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHI 474
L Y H + ++IHRD+K N+LL + E + DFG + S T + GT+ ++
Sbjct: 124 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYL 177
Query: 475 APEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQ 513
PE + EK D++ GVL E + G+ + Q
Sbjct: 178 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 216
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 134/281 (47%), Gaps = 33/281 (11%)
Query: 299 QIATGNFSPKNILGQGGYGVVYKG--CLPNR--MVVAVKRLKDPNFTGEVQ--FQTEVEM 352
++ N S ++G G +G V G LP++ + VA+K LK +T + + F E +
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEASI 70
Query: 353 IGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGT 412
+G H N++RL G + ++V YM NGS+ LR + + + + G
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---QLVGMLRGI 127
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGT 470
A G+ YL + +HRD+ A NIL++ + V DFGL+++L D ++ T +
Sbjct: 128 ASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 184
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNGQVQKGMILDCVRTLHEE 529
+ +PE ++ + + +DV+ +G++L E+++ G++ + Q D ++ + E
Sbjct: 185 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-------DVIKAVDEG 237
Query: 530 RRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKM 570
RL +D P L QL L C Q N RPK
Sbjct: 238 YRLPPPMDC-------PAAL---YQLMLDCWQKDRNNRPKF 268
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 100/208 (48%), Gaps = 12/208 (5%)
Query: 300 IATGNFSPKNI-----LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIG 354
+ + PK++ LG G +GVV G + VA+K +K+ + + E +F E +++
Sbjct: 1 MGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-EDEFIEEAKVMM 59
Query: 355 LALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTAR 414
H L++LYG C ++ YM NG + + LR+ R + + +
Sbjct: 60 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR---FQTQQLLEMCKDVCE 116
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHI 474
+ YL + + +HRD+ A N L+++ V DFGL++ + + + + V
Sbjct: 117 AMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWS 173
Query: 475 APEYLSTGQSSEKTDVFGFGVLLLELIT 502
PE L + S K+D++ FGVL+ E+ +
Sbjct: 174 PPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 134/281 (47%), Gaps = 33/281 (11%)
Query: 299 QIATGNFSPKNILGQGGYGVVYKG--CLPNR--MVVAVKRLKDPNFTGEVQ--FQTEVEM 352
++ N S ++G G +G V G LP++ + VA+K LK +T + + F E +
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEASI 99
Query: 353 IGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGT 412
+G H N++RL G + ++V YM NGS+ LR + + + + G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR---KHDAQFTVIQLVGMLRGI 156
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGT 470
A G+ YL + +HRD+ A NIL++ + V DFGL+++L D ++ T +
Sbjct: 157 ASGMKYLSDM---GFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNGQVQKGMILDCVRTLHEE 529
+ +PE ++ + + +DV+ +G++L E+++ G++ + Q D ++ + E
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-------DVIKAVDEG 266
Query: 530 RRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKM 570
RL +D P L QL L C Q N RPK
Sbjct: 267 YRLPPPMDC-------PAAL---YQLMLDCWQKDRNNRPKF 297
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 12/210 (5%)
Query: 298 LQIATGNFSPKNI-----LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEM 352
L + PK++ LG G +GVV G + VA+K +K+ + + E +F E ++
Sbjct: 14 LGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-EDEFIEEAKV 72
Query: 353 IGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGT 412
+ H L++LYG C ++ YM NG + + LR+ R + + +
Sbjct: 73 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR---FQTQQLLEMCKDV 129
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVG 472
+ YL + + +HRD+ A N L+++ V DFGL++ + + + + V
Sbjct: 130 CEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR 186
Query: 473 HIAPEYLSTGQSSEKTDVFGFGVLLLELIT 502
PE L + S K+D++ FGVL+ E+ +
Sbjct: 187 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 97/223 (43%), Gaps = 22/223 (9%)
Query: 299 QIATGNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNFTG---EVQFQTEVEMIG 354
Q A +F LG+G +G VY ++ ++A+K L E Q + EVE+
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 355 LALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTAR 414
H N+LRLYG+ L+ Y P G+V L Q D R A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELAN 119
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVR----GT 470
L Y H + ++IHRD+K N+LL + E + DFG + H ++ R GT
Sbjct: 120 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRTDLCGT 169
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQ 513
+ ++ PE + EK D++ GVL E + G+ + Q
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 212
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 96/219 (43%), Gaps = 14/219 (6%)
Query: 299 QIATGNFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFTG---EVQFQTEVEMIG 354
Q A +F LG+G +G VY ++ ++A+K L E Q + EVE+
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 355 LALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTAR 414
H N+LRLYG+ L+ Y P G+V L Q D R A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELAN 119
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHI 474
L Y H + ++IHRD+K N+LL + E + DFG + S A+ GT+ ++
Sbjct: 120 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRAALCGTLDYL 173
Query: 475 APEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQ 513
PE + EK D++ GVL E + G+ + Q
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 212
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 24/208 (11%)
Query: 310 ILGQGGYGVVYKGCLPNRMVVAVKRLKD-PNFTGEVQ--FQTEVEMIGLALHRNLLRLYG 366
+LG+G +G K + +R V +K+ F E Q F EV+++ H N+L+ G
Sbjct: 17 VLGKGCFGQAIK--VTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIG 74
Query: 367 FCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPK 426
+ + Y+ G++ ++ P W++R+ A A G+ YLH
Sbjct: 75 VLYKDKRLNFITEYIKGGTLRGIIKSMDSQYP---WSQRVSFAKDIASGMAYLHSM---N 128
Query: 427 IIHRDVKAANILLDESFEAVVGDFGLAKL-------------LDRRDSHVTTAVRGTVGH 473
IIHRD+ + N L+ E+ VV DFGLA+L L + D V G
Sbjct: 129 IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYW 188
Query: 474 IAPEYLSTGQSSEKTDVFGFGVLLLELI 501
+APE ++ EK DVF FG++L E+I
Sbjct: 189 MAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 134/281 (47%), Gaps = 33/281 (11%)
Query: 299 QIATGNFSPKNILGQGGYGVVYKG--CLPNR--MVVAVKRLKDPNFTGEVQ--FQTEVEM 352
++ N S ++G G +G V G LP++ + VA+K LK +T + + F E +
Sbjct: 29 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEASI 87
Query: 353 IGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGT 412
+G H N++RL G + ++V YM NGS+ LR + + + + G
Sbjct: 88 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR---KHDAQFTVIQLVGMLRGI 144
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGT 470
A G+ YL + +HRD+ A NIL++ + V DFGL+++L D ++ T +
Sbjct: 145 ASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 201
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNGQVQKGMILDCVRTLHEE 529
+ +PE ++ + + +DV+ +G++L E+++ G++ + Q D ++ + E
Sbjct: 202 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-------DVIKAVDEG 254
Query: 530 RRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKM 570
RL +D P L QL L C Q N RPK
Sbjct: 255 YRLPPPMDC-------PAAL---YQLMLDCWQKDRNNRPKF 285
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 96/219 (43%), Gaps = 14/219 (6%)
Query: 299 QIATGNFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFTG---EVQFQTEVEMIG 354
Q A +F LG+G +G VY ++ ++A+K L E Q + EVE+
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 355 LALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTAR 414
H N+LRLYG+ L+ Y P G+V L Q D R A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELAN 119
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHI 474
L Y H + ++IHRD+K N+LL + E + DFG + S T + GT+ ++
Sbjct: 120 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTXLCGTLDYL 173
Query: 475 APEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQ 513
PE + EK D++ GVL E + G+ + Q
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 212
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 12/210 (5%)
Query: 298 LQIATGNFSPKNI-----LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEM 352
L + PK++ LG G +GVV G + VA+K +K+ + + E +F E ++
Sbjct: 5 LGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-EDEFIEEAKV 63
Query: 353 IGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGT 412
+ H L++LYG C ++ YM NG + + LR+ R + + +
Sbjct: 64 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR---FQTQQLLEMCKDV 120
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVG 472
+ YL + + +HRD+ A N L+++ V DFGL++ + + + + V
Sbjct: 121 CEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR 177
Query: 473 HIAPEYLSTGQSSEKTDVFGFGVLLLELIT 502
PE L + S K+D++ FGVL+ E+ +
Sbjct: 178 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 207
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 104/203 (51%), Gaps = 19/203 (9%)
Query: 311 LGQGGYGVV----YKGCLPNR-MVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLY 365
LG+G +G V Y N +VAVK+L+ + FQ E++++ ALH + + Y
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK-ALHSDFIVKY 76
Query: 366 -GFCMTP--EERLLVYPYMPNGSVADCLRDTRQA-KPPLDWNRRMHIALGTARGLLYLHE 421
G P + LV Y+P+G CLRD Q + LD +R + + +G+ YL
Sbjct: 77 RGVSYGPGRQSLRLVMEYLPSG----CLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS 132
Query: 422 QCNPKIIHRDVKAANILLDESFEAVVGDFGLAKL--LDRRDSHVTTAVRGTVGHIAPEYL 479
+ + +HRD+ A NIL++ + DFGLAKL LD+ V + + APE L
Sbjct: 133 R---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESL 189
Query: 480 STGQSSEKTDVFGFGVLLLELIT 502
S S ++DV+ FGV+L EL T
Sbjct: 190 SDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 97/223 (43%), Gaps = 22/223 (9%)
Query: 299 QIATGNFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFTG---EVQFQTEVEMIG 354
Q A +F LG+G +G VY ++ ++A+K L E Q + EVE+
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 355 LALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTAR 414
H N+LRLYG+ L+ Y P G+V L Q D R A
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELAN 122
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVR----GT 470
L Y H + ++IHRD+K N+LL + E + DFG + H ++ R GT
Sbjct: 123 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRDDLCGT 172
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQ 513
+ ++ PE + EK D++ GVL E + G+ + Q
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 215
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 99/206 (48%), Gaps = 12/206 (5%)
Query: 302 TGNFSPKNI-----LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLA 356
+ PK++ LG G +GVV G + VA+K +K+ + + E +F E +++
Sbjct: 2 SWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-EDEFIEEAKVMMNL 60
Query: 357 LHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGL 416
H L++LYG C ++ YM NG + + LR+ R + + + +
Sbjct: 61 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR---FQTQQLLEMCKDVCEAM 117
Query: 417 LYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAP 476
YL + + +HRD+ A N L+++ V DFGL++ + + + + V P
Sbjct: 118 EYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPP 174
Query: 477 EYLSTGQSSEKTDVFGFGVLLLELIT 502
E L + S K+D++ FGVL+ E+ +
Sbjct: 175 EVLMYSKFSSKSDIWAFGVLMWEIYS 200
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 108/224 (48%), Gaps = 24/224 (10%)
Query: 285 FDVGHLKRFSFRELQIATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEV 344
F+ HLK S Q+ GNF + G +VAVK+L+ +
Sbjct: 20 FEERHLKYIS----QLGKGNFGSVELCRYDPLGDN------TGALVAVKQLQHSGPDQQR 69
Query: 345 QFQTEVEMIGLALHRNLLRLY-GFCMTP--EERLLVYPYMPNGSVADCLRDTRQA-KPPL 400
FQ E++++ ALH + + Y G P + LV Y+P+G CLRD Q + L
Sbjct: 70 DFQREIQILK-ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG----CLRDFLQRHRARL 124
Query: 401 DWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKL--LDR 458
D +R + + +G+ YL + + +HRD+ A NIL++ + DFGLAKL LD+
Sbjct: 125 DASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK 181
Query: 459 RDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT 502
V + + APE LS S ++DV+ FGV+L EL T
Sbjct: 182 DYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 111/211 (52%), Gaps = 21/211 (9%)
Query: 309 NILGQGGYGVVYKGC-LPN----RMVVAVKRLKDPN-FTGEVQFQTEVEMIGLALHRNLL 362
+LG G +G VYKG +P ++ VA+K L + V+F E ++ H +L+
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 363 RLYGFCMTPEERLLVYPYMPNGSVADCL---RDTRQAKPPLDWNRRMHIALGTARGLLYL 419
RL G C++P +L V MP+G + + + +D ++ L+W + A+G++YL
Sbjct: 104 RLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIAKGMMYL 156
Query: 420 HEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTT-AVRGTVGHIAPEY 478
E+ +++HRD+ A N+L+ + DFGLA+LL+ + + + +A E
Sbjct: 157 EER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC 213
Query: 479 LSTGQSSEKTDVFGFGVLLLELIT-GQKALD 508
+ + + ++DV+ +GV + EL+T G K D
Sbjct: 214 IHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 244
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 111/211 (52%), Gaps = 21/211 (9%)
Query: 309 NILGQGGYGVVYKGC-LPN----RMVVAVKRLKDPN-FTGEVQFQTEVEMIGLALHRNLL 362
+LG G +G VYKG +P ++ VA+K L + V+F E ++ H +L+
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 363 RLYGFCMTPEERLLVYPYMPNGSVADCL---RDTRQAKPPLDWNRRMHIALGTARGLLYL 419
RL G C++P +L V MP+G + + + +D ++ L+W + A+G++YL
Sbjct: 81 RLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIAKGMMYL 133
Query: 420 HEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTT-AVRGTVGHIAPEY 478
E+ +++HRD+ A N+L+ + DFGLA+LL+ + + + +A E
Sbjct: 134 EER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC 190
Query: 479 LSTGQSSEKTDVFGFGVLLLELIT-GQKALD 508
+ + + ++DV+ +GV + EL+T G K D
Sbjct: 191 IHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 221
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 97/223 (43%), Gaps = 22/223 (9%)
Query: 299 QIATGNFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFTG---EVQFQTEVEMIG 354
Q A +F LG+G +G VY ++ ++A+K L E Q + EVE+
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 355 LALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTAR 414
H N+LRLYG+ L+ Y P G+V L Q D R A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELAN 119
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVR----GT 470
L Y H + ++IHRD+K N+LL + E + DFG + H ++ R GT
Sbjct: 120 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRXXLCGT 169
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQ 513
+ ++ PE + EK D++ GVL E + G+ + Q
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 212
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 134/281 (47%), Gaps = 33/281 (11%)
Query: 299 QIATGNFSPKNILGQGGYGVVYKG--CLPNR--MVVAVKRLKDPNFTGEVQ--FQTEVEM 352
++ N S ++G G +G V G LP++ + VA+K LK +T + + F E +
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEASI 99
Query: 353 IGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGT 412
+G H N++RL G + ++V YM NGS+ LR + + + + G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR---KHDAQFTVIQLVGMLRGI 156
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGT 470
A G+ YL + +HRD+ A NIL++ + V DFGL+++L D ++ T +
Sbjct: 157 ASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNGQVQKGMILDCVRTLHEE 529
+ +PE ++ + + +DV+ +G++L E+++ G++ + Q D ++ + E
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-------DVIKAVDEG 266
Query: 530 RRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKM 570
RL +D P L QL L C Q N RPK
Sbjct: 267 YRLPPPMDC-------PAAL---YQLMLDCWQKDRNNRPKF 297
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 108/224 (48%), Gaps = 24/224 (10%)
Query: 285 FDVGHLKRFSFRELQIATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEV 344
F+ HLK S Q+ GNF + G +VAVK+L+ +
Sbjct: 8 FEERHLKYIS----QLGKGNFGSVELCRYDPLGDN------TGALVAVKQLQHSGPDQQR 57
Query: 345 QFQTEVEMIGLALHRNLLRLY-GFCMTP--EERLLVYPYMPNGSVADCLRDTRQA-KPPL 400
FQ E++++ ALH + + Y G P + LV Y+P+G CLRD Q + L
Sbjct: 58 DFQREIQILK-ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG----CLRDFLQRHRARL 112
Query: 401 DWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKL--LDR 458
D +R + + +G+ YL + + +HRD+ A NIL++ + DFGLAKL LD+
Sbjct: 113 DASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK 169
Query: 459 RDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT 502
V + + APE LS S ++DV+ FGV+L EL T
Sbjct: 170 DYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 134/281 (47%), Gaps = 33/281 (11%)
Query: 299 QIATGNFSPKNILGQGGYGVVYKG--CLPNR--MVVAVKRLKDPNFTGEVQ--FQTEVEM 352
++ N S ++G G +G V G LP++ + VA+K LK +T + + F E +
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEASI 99
Query: 353 IGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGT 412
+G H N++RL G + ++V YM NGS+ LR + + + + G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR---KHDAQFTVIQLVGMLRGI 156
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGT 470
A G+ YL + +HRD+ A NIL++ + V DFGL+++L D ++ T +
Sbjct: 157 ASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNGQVQKGMILDCVRTLHEE 529
+ +PE ++ + + +DV+ +G++L E+++ G++ + Q D ++ + E
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-------DVIKAVDEG 266
Query: 530 RRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKM 570
RL +D P L QL L C Q N RPK
Sbjct: 267 YRLPPPMDC-------PAAL---YQLMLDCWQKDRNNRPKF 297
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 134/281 (47%), Gaps = 33/281 (11%)
Query: 299 QIATGNFSPKNILGQGGYGVVYKG--CLPNR--MVVAVKRLKDPNFTGEVQ--FQTEVEM 352
++ N S ++G G +G V G LP++ + VA+K LK +T + + F E +
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEASI 99
Query: 353 IGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGT 412
+G H N++RL G + ++V YM NGS+ LR + + + + G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR---KHDAQFTVIQLVGMLRGI 156
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGT 470
A G+ YL + +HRD+ A NIL++ + V DFGL+++L D ++ T +
Sbjct: 157 ASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNGQVQKGMILDCVRTLHEE 529
+ +PE ++ + + +DV+ +G++L E+++ G++ + Q D ++ + E
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-------DVIKAVDEG 266
Query: 530 RRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKM 570
RL +D P L QL L C Q N RPK
Sbjct: 267 YRLPPPMDC-------PAAL---YQLMLDCWQKDRNNRPKF 297
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 98/201 (48%), Gaps = 12/201 (5%)
Query: 307 PKNI-----LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNL 361
PK++ LG G +GVV G + VA+K +K+ + + E +F E +++ H L
Sbjct: 3 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKL 61
Query: 362 LRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHE 421
++LYG C ++ YM NG + + LR+ R + + + + YL
Sbjct: 62 VQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR---FQTQQLLEMCKDVCEAMEYLES 118
Query: 422 QCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLST 481
+ + +HRD+ A N L+++ V DFGL++ + + + + V PE L
Sbjct: 119 K---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMY 175
Query: 482 GQSSEKTDVFGFGVLLLELIT 502
+ S K+D++ FGVL+ E+ +
Sbjct: 176 SKFSSKSDIWAFGVLMWEIYS 196
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 134/281 (47%), Gaps = 33/281 (11%)
Query: 299 QIATGNFSPKNILGQGGYGVVYKG--CLPNR--MVVAVKRLKDPNFTGEVQ--FQTEVEM 352
++ N S ++G G +G V G LP++ + VA+K LK +T + + F E +
Sbjct: 39 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEASI 97
Query: 353 IGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGT 412
+G H N++RL G + ++V YM NGS+ LR + + + + G
Sbjct: 98 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR---KHDAQFTVIQLVGMLRGI 154
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGT 470
A G+ YL + +HRD+ A NIL++ + V DFGL+++L D ++ T +
Sbjct: 155 ASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 211
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNGQVQKGMILDCVRTLHEE 529
+ +PE ++ + + +DV+ +G++L E+++ G++ + Q D ++ + E
Sbjct: 212 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-------DVIKAVDEG 264
Query: 530 RRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKM 570
RL +D P L QL L C Q N RPK
Sbjct: 265 YRLPPPMDC-------PAAL---YQLMLDCWQKDRNNRPKF 295
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 134/281 (47%), Gaps = 33/281 (11%)
Query: 299 QIATGNFSPKNILGQGGYGVVYKG--CLPNR--MVVAVKRLKDPNFTGEVQ--FQTEVEM 352
++ N S ++G G +G V G LP++ + VA+K LK +T + + F E +
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEASI 99
Query: 353 IGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGT 412
+G H N++RL G + ++V YM NGS+ LR + + + + G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR---KHDAQFTVIQLVGMLRGI 156
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGT 470
A G+ YL + +HRD+ A NIL++ + V DFGL+++L D ++ T +
Sbjct: 157 ASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNGQVQKGMILDCVRTLHEE 529
+ +PE ++ + + +DV+ +G++L E+++ G++ + Q D ++ + E
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-------DVIKAVDEG 266
Query: 530 RRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKM 570
RL +D P L QL L C Q N RPK
Sbjct: 267 YRLPPPMDC-------PAAL---YQLMLDCWQKDRNNRPKF 297
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 133/281 (47%), Gaps = 33/281 (11%)
Query: 299 QIATGNFSPKNILGQGGYGVVYKG--CLPNR--MVVAVKRLKDPNFTGEVQ--FQTEVEM 352
++ N S ++G G +G V G LP++ + VA+K LK +T + + F E +
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEASI 99
Query: 353 IGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGT 412
+G H N++RL G + ++V YM NGS+ LR + + + + G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR---KHDAQFTVIQLVGMLRGI 156
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGT 470
A G+ YL + +HRD+ A NIL++ + V DFGL ++L D ++ T +
Sbjct: 157 ASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIP 213
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNGQVQKGMILDCVRTLHEE 529
+ +PE ++ + + +DV+ +G++L E+++ G++ + Q D ++ + E
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-------DVIKAVDEG 266
Query: 530 RRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKM 570
RL +D P L QL L C Q N RPK
Sbjct: 267 YRLPPPMDC-------PAAL---YQLMLDCWQKDRNNRPKF 297
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 99/207 (47%), Gaps = 12/207 (5%)
Query: 301 ATGNFSPKNI-----LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGL 355
+ PK++ LG G +GVV G + VA+K +K+ + + E +F E +++
Sbjct: 2 GSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-EDEFIEEAKVMMN 60
Query: 356 ALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARG 415
H L++LYG C ++ YM NG + + LR+ R + + +
Sbjct: 61 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR---FQTQQLLEMCKDVCEA 117
Query: 416 LLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIA 475
+ YL + + +HRD+ A N L+++ V DFGL++ + + + + V
Sbjct: 118 MEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSP 174
Query: 476 PEYLSTGQSSEKTDVFGFGVLLLELIT 502
PE L + S K+D++ FGVL+ E+ +
Sbjct: 175 PEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 115/255 (45%), Gaps = 30/255 (11%)
Query: 292 RFSFRELQI----ATGNFSPKNILGQGGYGVVYK-GCLPNRMVVAVKRLKDPNFTGEVQF 346
++S ++ QI TG+F +++ G Y L +VV +K+++ N
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTN------- 54
Query: 347 QTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRM 406
E M+ + H ++R++G ++ ++ Y+ G + LR +++ P+
Sbjct: 55 -DERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPV----AK 109
Query: 407 HIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTA 466
A L YLH + II+RD+K NILLD++ + DFG AK + VT
Sbjct: 110 FYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYV----PDVTYX 162
Query: 467 VRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTL 526
+ GT +IAPE +ST ++ D + FG+L+ E++ G N IL+
Sbjct: 163 LCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNA---- 218
Query: 527 HEERRLDVLIDRDLK 541
E R + D+K
Sbjct: 219 --ELRFPPFFNEDVK 231
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 98/222 (44%), Gaps = 14/222 (6%)
Query: 296 RELQIATGNFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFTG---EVQFQTEVE 351
++ Q A +F LG+G +G VY ++ ++A+K L E Q + EVE
Sbjct: 3 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 62
Query: 352 MIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALG 411
+ H N+LRLYG+ L+ Y P G+V L Q D R
Sbjct: 63 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITE 118
Query: 412 TARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTV 471
A L Y H + ++IHRD+K N+LL + E + +FG + S T + GT+
Sbjct: 119 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSV---HAPSSRRTTLCGTL 172
Query: 472 GHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQ 513
++ PE + EK D++ GVL E + G+ + Q
Sbjct: 173 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 214
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 98/222 (44%), Gaps = 14/222 (6%)
Query: 296 RELQIATGNFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFTG---EVQFQTEVE 351
++ Q A +F LG+G +G VY ++ ++A+K L E Q + EVE
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 352 MIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALG 411
+ H N+LRLYG+ L+ Y P G+V L Q D R
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITE 119
Query: 412 TARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTV 471
A L Y H + ++IHRD+K N+LL + E + +FG + S T + GT+
Sbjct: 120 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSV---HAPSSRRTTLCGTL 173
Query: 472 GHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQ 513
++ PE + EK D++ GVL E + G+ + Q
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 215
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 122/278 (43%), Gaps = 45/278 (16%)
Query: 311 LGQGGYGVVYKGCLPN------RMVVAVKRLKD-PNFTGEVQFQTEVE-MIGLALHRNLL 362
LGQG +G+VY+G + VAVK + + + ++F E M G H +++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVV 83
Query: 363 RLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQ------AKPPLDWNRRMHIALGTARGL 416
RL G + L+V M +G + LR R +PP + +A A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 417 LYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRG--TVGHI 474
YL+ + K +HRD+ A N ++ F +GDFG+ + + D +G V +
Sbjct: 144 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDX-XRKGGKGLLPVRWM 199
Query: 475 APEYLSTGQSSEKTDVFGFGVLLLEL--ITGQKALDVGNGQVQKGMILDCVRTLHEERRL 532
APE L G + +D++ FGV+L E+ + Q + N QV K ++D
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK-FVMD----------- 247
Query: 533 DVLIDRDLKGSFDPTE--LEKMVQLALQCTQSHPNLRP 568
G D + E++ L C Q +PN+RP
Sbjct: 248 --------GGYLDQPDNCPERVTDLMRMCWQFNPNMRP 277
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 102/224 (45%), Gaps = 38/224 (16%)
Query: 309 NILGQGGYGVVYKGCLPNRMV-VAVKRLKDPNFTGEVQFQTEVEMIGLA--LHRNLLRLY 365
+ +G +G V+K L N V V + ++D +Q E E+ L H N+L+
Sbjct: 30 EVKARGRFGCVWKAQLLNEYVAVKIFPIQDKQ-----SWQNEYEVYSLPGMKHENILQFI 84
Query: 366 GFCMTPEER--------LLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLL 417
G E+R L+ + GS++D L+ + WN HIA ARGL
Sbjct: 85 G----AEKRGTSVDVDLWLITAFHEKGSLSDFLKAN-----VVSWNELCHIAETMARGLA 135
Query: 418 YLHEQC-------NPKIIHRDVKAANILLDESFEAVVGDFGLA-KLLDRRDSHVTTAVRG 469
YLHE P I HRD+K+ N+LL + A + DFGLA K + + T G
Sbjct: 136 YLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVG 195
Query: 470 TVGHIAPEYLSTGQSSE-----KTDVFGFGVLLLELITGQKALD 508
T ++APE L + + + D++ G++L EL + A D
Sbjct: 196 TRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAAD 239
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 131/275 (47%), Gaps = 37/275 (13%)
Query: 308 KNILGQGGYGVVYKG--CLPNR--MVVAVKRLKDPNFTGEVQ--FQTEVEMIGLALHRNL 361
+ ++G G +G V G LP + + VA+K LK +T + + F +E ++G H N+
Sbjct: 38 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKS-GYTEKQRRDFLSEASIMGQFDHPNV 96
Query: 362 LRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHE 421
+ L G +++ +M NGS+ LR Q + + + G A G+ YL +
Sbjct: 97 IHLEGVVTKSTPVMIITEFMENGSLDSFLR---QNDGQFTVIQLVGMLRGIAAGMKYLAD 153
Query: 422 QCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGTVG--HIAPE 477
+HRD+ A NIL++ + V DFGL++ L D D T+A+ G + APE
Sbjct: 154 M---NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPE 210
Query: 478 YLSTGQSSEKTDVFGFGVLLLELIT-GQKAL-DVGNGQVQKGMILDCVRTLHEERRLDVL 535
+ + + +DV+ +G+++ E+++ G++ D+ N D + + ++ RL
Sbjct: 211 AIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQ--------DVINAIEQDYRLPPP 262
Query: 536 IDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKM 570
+D P+ L QL L C Q N RPK
Sbjct: 263 MDC-------PSALH---QLMLDCWQKDRNHRPKF 287
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 96/215 (44%), Gaps = 14/215 (6%)
Query: 300 IATGNFSPKNILGQGGYGVVYKG-CLPNRMVVAVKRLK-DPNFTGEVQFQTEVEMIGLAL 357
I ++ + ++G G VV C P + VA+KR+ + T + E++ +
Sbjct: 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCH 71
Query: 358 HRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDT----RQAKPPLDWNRRMHIALGTA 413
H N++ Y + +E LV + GSV D ++ LD + I
Sbjct: 72 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 131
Query: 414 RGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL----DRRDSHVTTAVRG 469
GL YLH+ IHRDVKA NILL E + DFG++ L D + V G
Sbjct: 132 EGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVG 188
Query: 470 TVGHIAPEYLSTGQSSE-KTDVFGFGVLLLELITG 503
T +APE + + + K D++ FG+ +EL TG
Sbjct: 189 TPCWMAPEVMEQVRGYDFKADIWSFGITAIELATG 223
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 122/282 (43%), Gaps = 53/282 (18%)
Query: 311 LGQGGYGVVYKGCLPN------RMVVAVKRLKD-PNFTGEVQFQTEVE-MIGLALHRNLL 362
LGQG +G+VY+G + VAVK + + + ++F E M G H +++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVV 83
Query: 363 RLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQ------AKPPLDWNRRMHIALGTARGL 416
RL G + L+V M +G + LR R +PP + +A A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 417 LYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRG------T 470
YL+ + K +HR++ A N ++ F +GDFG+ RD + T R
Sbjct: 144 AYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMT-----RDIYETDYYRKGGKGLLP 195
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLEL--ITGQKALDVGNGQVQKGMILDCVRTLHE 528
V +APE L G + +D++ FGV+L E+ + Q + N QV K ++D
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK-FVMD------- 247
Query: 529 ERRLDVLIDRDLKGSFDPTE--LEKMVQLALQCTQSHPNLRP 568
G D + E++ L C Q +PN+RP
Sbjct: 248 ------------GGYLDQPDNCPERVTDLMRMCWQFNPNMRP 277
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 122/282 (43%), Gaps = 53/282 (18%)
Query: 311 LGQGGYGVVYKGCLPN------RMVVAVKRLKD-PNFTGEVQFQTEVE-MIGLALHRNLL 362
LGQG +G+VY+G + VAVK + + + ++F E M G H +++
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVV 84
Query: 363 RLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQ------AKPPLDWNRRMHIALGTARGL 416
RL G + L+V M +G + LR R +PP + +A A G+
Sbjct: 85 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 144
Query: 417 LYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRG------T 470
YL+ + K +HR++ A N ++ F +GDFG+ RD + T R
Sbjct: 145 AYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMT-----RDIYETDYYRKGGKGLLP 196
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLEL--ITGQKALDVGNGQVQKGMILDCVRTLHE 528
V +APE L G + +D++ FGV+L E+ + Q + N QV K ++D
Sbjct: 197 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK-FVMD------- 248
Query: 529 ERRLDVLIDRDLKGSFDPTE--LEKMVQLALQCTQSHPNLRP 568
G D + E++ L C Q +PN+RP
Sbjct: 249 ------------GGYLDQPDNCPERVTDLMRMCWQFNPNMRP 278
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 133/281 (47%), Gaps = 33/281 (11%)
Query: 299 QIATGNFSPKNILGQGGYGVVYKG--CLPNR--MVVAVKRLKDPNFTGEVQ--FQTEVEM 352
++ N S ++G G +G V G LP++ + VA+K LK +T + + F E +
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEASI 70
Query: 353 IGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGT 412
+G H N++RL G + ++V M NGS+ LR + + + + G
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLR---KHDAQFTVIQLVGMLRGI 127
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGT 470
A G+ YL + +HRD+ A NIL++ + V DFGL+++L D ++ T +
Sbjct: 128 ASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 184
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNGQVQKGMILDCVRTLHEE 529
+ +PE ++ + + +DV+ +G++L E+++ G++ + Q D ++ + E
Sbjct: 185 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-------DVIKAVDEG 237
Query: 530 RRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKM 570
RL +D P L QL L C Q N RPK
Sbjct: 238 YRLPPPMDC-------PAAL---YQLMLDCWQKDRNNRPKF 268
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 121/282 (42%), Gaps = 53/282 (18%)
Query: 311 LGQGGYGVVYKGCLPN------RMVVAVKRLKD-PNFTGEVQFQTEVE-MIGLALHRNLL 362
LGQG +G+VY+G + VAVK + + + ++F E M G H +++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVV 83
Query: 363 RLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQ------AKPPLDWNRRMHIALGTARGL 416
RL G + L+V M +G + LR R +PP + +A A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 417 LYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRG------T 470
YL+ + K +HRD+ A N ++ F +GDFG+ RD + T R
Sbjct: 144 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMT-----RDIYETAYYRKGGKGLLP 195
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLEL--ITGQKALDVGNGQVQKGMILDCVRTLHE 528
V +APE L G + +D++ FGV+L E+ + Q + N QV K ++D
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK-FVMDG------ 248
Query: 529 ERRLDVLIDRDLKGSFDPTE--LEKMVQLALQCTQSHPNLRP 568
G D + E++ L C Q +P +RP
Sbjct: 249 -------------GYLDQPDNCPERVTDLMRMCWQFNPKMRP 277
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 96/215 (44%), Gaps = 14/215 (6%)
Query: 300 IATGNFSPKNILGQGGYGVVYKG-CLPNRMVVAVKRLK-DPNFTGEVQFQTEVEMIGLAL 357
I ++ + ++G G VV C P + VA+KR+ + T + E++ +
Sbjct: 7 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCH 66
Query: 358 HRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDT----RQAKPPLDWNRRMHIALGTA 413
H N++ Y + +E LV + GSV D ++ LD + I
Sbjct: 67 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 126
Query: 414 RGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL----DRRDSHVTTAVRG 469
GL YLH+ IHRDVKA NILL E + DFG++ L D + V G
Sbjct: 127 EGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVG 183
Query: 470 TVGHIAPEYLSTGQSSE-KTDVFGFGVLLLELITG 503
T +APE + + + K D++ FG+ +EL TG
Sbjct: 184 TPCWMAPEVMEQVRGYDFKADIWSFGITAIELATG 218
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 114/250 (45%), Gaps = 19/250 (7%)
Query: 269 YRSRLLFTSYVQQDYEFDVGHL-KRFSFREL-QIATGNFSPKNILGQGGYGVVYKGCL-- 324
Y+ L TS + DY + K S +L ++ N + LG G +G VY+G +
Sbjct: 1 YKLSKLRTSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSG 60
Query: 325 ----PNRMVVAVKRLKDP-NFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYP 379
P+ + VAVK L + + E+ F E +I H+N++R G + R ++
Sbjct: 61 MPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLE 120
Query: 380 YMPNGSVADCLRDT--RQAKP-PLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAAN 436
M G + LR+T R ++P L +H+A A G YL E IHRD+ A N
Sbjct: 121 LMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARN 177
Query: 437 ILLD---ESFEAVVGDFGLAKLLDRRDSHVTTAVRG-TVGHIAPEYLSTGQSSEKTDVFG 492
LL A +GDFG+A+ + R + V + PE G + KTD +
Sbjct: 178 CLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWS 237
Query: 493 FGVLLLELIT 502
FGVLL E+ +
Sbjct: 238 FGVLLWEIFS 247
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 121/282 (42%), Gaps = 53/282 (18%)
Query: 311 LGQGGYGVVYKGCLPN------RMVVAVKRLKD-PNFTGEVQFQTEVE-MIGLALHRNLL 362
LGQG +G+VY+G + VAVK + + + ++F E M G H +++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVV 83
Query: 363 RLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQ------AKPPLDWNRRMHIALGTARGL 416
RL G + L+V M +G + LR R +PP + +A A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 417 LYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRG------T 470
YL+ + K +HRD+ A N ++ F +GDFG+ RD + T R
Sbjct: 144 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMT-----RDIYETDYYRKGGKGLLP 195
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLEL--ITGQKALDVGNGQVQKGMILDCVRTLHE 528
V +APE L G + +D++ FGV+L E+ + Q + N QV K ++D
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK-FVMDG------ 248
Query: 529 ERRLDVLIDRDLKGSFDPTE--LEKMVQLALQCTQSHPNLRP 568
G D + E++ L C Q +P +RP
Sbjct: 249 -------------GYLDQPDNCPERVTDLMRMCWQFNPKMRP 277
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 113/251 (45%), Gaps = 21/251 (8%)
Query: 269 YRSRLLFTSYVQQDYEFDVGHL-KRFSFREL-QIATGNFSPKNILGQGGYGVVYKGCL-- 324
Y+ L TS + DY + K S +L ++ N + LG G +G VY+G +
Sbjct: 21 YKLSKLRTSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSG 80
Query: 325 ----PNRMVVAVKRLKDP-NFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYP 379
P+ + VAVK L + + E+ F E +I H+N++R G + R ++
Sbjct: 81 MPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLE 140
Query: 380 YMPNGSVADCLRDTRQAKPPLDWNRRM----HIALGTARGLLYLHEQCNPKIIHRDVKAA 435
M G + LR+TR +P + M H+A A G YL E IHRD+ A
Sbjct: 141 LMAGGDLKSFLRETR-PRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAAR 196
Query: 436 NILLD---ESFEAVVGDFGLAKLLDRRDSHVTTAVRG-TVGHIAPEYLSTGQSSEKTDVF 491
N LL A +GDFG+A+ + R + V + PE G + KTD +
Sbjct: 197 NCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 256
Query: 492 GFGVLLLELIT 502
FGVLL E+ +
Sbjct: 257 SFGVLLWEIFS 267
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 95/203 (46%), Gaps = 13/203 (6%)
Query: 305 FSPKNILGQGGYGVVYKGCLPNRM--VVAVKRLK-DPNFTGEVQFQTEVEMIGLALHRNL 361
F+ +G+G +G V+KG + NR VVA+K + + Q E+ ++ +
Sbjct: 9 FTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 67
Query: 362 LRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHE 421
+ YG + + ++ Y+ GS D L PLD + I +GL YLH
Sbjct: 68 TKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG-----PLDETQIATILREILKGLDYLHS 122
Query: 422 QCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLST 481
+ K IHRD+KAAN+LL E E + DFG+A L T V GT +APE +
Sbjct: 123 E---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQ 178
Query: 482 GQSSEKTDVFGFGVLLLELITGQ 504
K D++ G+ +EL G+
Sbjct: 179 SAYDSKADIWSLGITAIELARGE 201
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 94/219 (42%), Gaps = 14/219 (6%)
Query: 299 QIATGNFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFTG---EVQFQTEVEMIG 354
Q +F LG+G +G VY ++ ++A+K L E Q + EVE+
Sbjct: 8 QWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQS 67
Query: 355 LALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTAR 414
H N+LRLYG+ L+ Y P G+V L Q D R A
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSRFDEQRTATYITELAN 123
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHI 474
L Y H + ++IHRD+K N+LL + E + DFG + S T + GT+ ++
Sbjct: 124 ALSYCHSK---RVIHRDIKPENLLLGSNGELKIADFGWSV---HAPSSRRTTLCGTLDYL 177
Query: 475 APEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQ 513
PE + EK D++ GVL E + G + Q
Sbjct: 178 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQ 216
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 104/234 (44%), Gaps = 39/234 (16%)
Query: 300 IATGNFSPKNILGQGGYGVVYKGCLPNRMV-VAVKRLKDPNFTGEVQFQTEVEMIGLA-- 356
+ G+ I +G +G V+K L N V V + L+D +Q+E E+
Sbjct: 12 VPRGSLQLLEIKARGRFGCVWKAQLMNDFVAVKIFPLQDKQ-----SWQSEREIFSTPGM 66
Query: 357 LHRNLLRLYGFCMTPEER--------LLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHI 408
H NLL+ + E+R L+ + GS+ D L+ + WN H+
Sbjct: 67 KHENLLQF----IAAEKRGSNLEVELWLITAFHDKGSLTDYLKGN-----IITWNELCHV 117
Query: 409 ALGTARGLLYLHEQC--------NPKIIHRDVKAANILLDESFEAVVGDFGLA-KLLDRR 459
A +RGL YLHE P I HRD K+ N+LL AV+ DFGLA + +
Sbjct: 118 AETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGK 177
Query: 460 DSHVTTAVRGTVGHIAPEYLSTGQSSE-----KTDVFGFGVLLLELITGQKALD 508
T GT ++APE L + + + D++ G++L EL++ KA D
Sbjct: 178 PPGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 95/203 (46%), Gaps = 13/203 (6%)
Query: 305 FSPKNILGQGGYGVVYKGCLPNRM--VVAVKRLK-DPNFTGEVQFQTEVEMIGLALHRNL 361
F+ +G+G +G V+KG + NR VVA+K + + Q E+ ++ +
Sbjct: 29 FTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 87
Query: 362 LRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHE 421
+ YG + + ++ Y+ GS D L PLD + I +GL YLH
Sbjct: 88 TKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG-----PLDETQIATILREILKGLDYLHS 142
Query: 422 QCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLST 481
+ K IHRD+KAAN+LL E E + DFG+A L T V GT +APE +
Sbjct: 143 E---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQ 198
Query: 482 GQSSEKTDVFGFGVLLLELITGQ 504
K D++ G+ +EL G+
Sbjct: 199 SAYDSKADIWSLGITAIELARGE 221
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 110/232 (47%), Gaps = 8/232 (3%)
Query: 301 ATGNFSPKNILGQGGYGVVYKGCLPNRMV-VAVKRLKDPNFTGEVQFQT-EVEMIGLALH 358
++ F LG G Y VYKG V VA+K +K + G E+ ++ H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 359 RNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPP-LDWNRRMHIALGTARGLL 417
N++RLY T + LV+ +M N T P L+ N + +GL
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLA 122
Query: 418 YLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPE 477
+ HE KI+HRD+K N+L+++ + +GDFGLA+ + ++ V T+ + AP+
Sbjct: 123 FCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV-TLWYRAPD 178
Query: 478 YLSTGQS-SEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHE 528
L ++ S D++ G +L E+ITG+ N + Q +I D + T +E
Sbjct: 179 VLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNE 230
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 114/250 (45%), Gaps = 19/250 (7%)
Query: 269 YRSRLLFTSYVQQDYEFDVGHL-KRFSFREL-QIATGNFSPKNILGQGGYGVVYKGCL-- 324
Y+ L TS + DY + K S +L ++ N + LG G +G VY+G +
Sbjct: 11 YKLSKLRTSTIMTDYNPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSG 70
Query: 325 ----PNRMVVAVKRLKDP-NFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYP 379
P+ + VAVK L + + E+ F E +I H+N++R G + R ++
Sbjct: 71 MPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLE 130
Query: 380 YMPNGSVADCLRDT--RQAKP-PLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAAN 436
M G + LR+T R ++P L +H+A A G YL E IHRD+ A N
Sbjct: 131 LMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARN 187
Query: 437 ILLD---ESFEAVVGDFGLAKLLDRRDSHVTTAVRG-TVGHIAPEYLSTGQSSEKTDVFG 492
LL A +GDFG+A+ + R + V + PE G + KTD +
Sbjct: 188 CLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWS 247
Query: 493 FGVLLLELIT 502
FGVLL E+ +
Sbjct: 248 FGVLLWEIFS 257
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 96/221 (43%), Gaps = 18/221 (8%)
Query: 299 QIATGNFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFTG---EVQFQTEVEMIG 354
Q +F LG+G +G VY ++ ++A+K L E Q + EVE+
Sbjct: 8 QWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQS 67
Query: 355 LALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTAR 414
H N+LRLYG+ L+ Y P G+V L Q D R A
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSRFDEQRTATYITELAN 123
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLA--KLLDRRDSHVTTAVRGTVG 472
L Y H + ++IHRD+K N+LL + E + DFG + RRD+ + GT+
Sbjct: 124 ALSYCHSK---RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDT-----LCGTLD 175
Query: 473 HIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQ 513
++ PE + EK D++ GVL E + G + Q
Sbjct: 176 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQ 216
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 133/281 (47%), Gaps = 33/281 (11%)
Query: 299 QIATGNFSPKNILGQGGYGVVYKG--CLPNR--MVVAVKRLKDPNFTGEVQ--FQTEVEM 352
++ N S ++G G +G V G LP++ + VA+K LK +T + + F E +
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEASI 99
Query: 353 IGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGT 412
+G H N++RL G + ++V M NGS+ LR + + + + G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLR---KHDAQFTVIQLVGMLRGI 156
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGT 470
A G+ YL + +HRD+ A NIL++ + V DFGL+++L D ++ T +
Sbjct: 157 ASGMKYLSDM---GAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNGQVQKGMILDCVRTLHEE 529
+ +PE ++ + + +DV+ +G++L E+++ G++ + Q D ++ + E
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-------DVIKAVDEG 266
Query: 530 RRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKM 570
RL +D P L QL L C Q N RPK
Sbjct: 267 YRLPPPMDC-------PAAL---YQLMLDCWQKDRNNRPKF 297
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 133/281 (47%), Gaps = 33/281 (11%)
Query: 299 QIATGNFSPKNILGQGGYGVVYKG--CLPNR--MVVAVKRLKDPNFTGEVQ--FQTEVEM 352
++ N S ++G G +G V G LP++ + VA+K LK +T + + F E +
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEASI 99
Query: 353 IGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGT 412
+G H N++RL G + ++V M NGS+ LR + + + + G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLR---KHDAQFTVIQLVGMLRGI 156
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGT 470
A G+ YL + +HRD+ A NIL++ + V DFGL+++L D ++ T +
Sbjct: 157 ASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNGQVQKGMILDCVRTLHEE 529
+ +PE ++ + + +DV+ +G++L E+++ G++ + Q D ++ + E
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-------DVIKAVDEG 266
Query: 530 RRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKM 570
RL +D P L QL L C Q N RPK
Sbjct: 267 YRLPPPMDC-------PAAL---YQLMLDCWQKDRNNRPKF 297
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 103/218 (47%), Gaps = 32/218 (14%)
Query: 311 LGQGGYGVVY--------KGCLPNRMVVAVKRLKDPNFTGEV-QFQTEVEMIGL-ALHRN 360
LG+G +G V K + VAVK LKD ++ +E+EM+ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 361 LLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPP-----LDWNR----------R 405
++ L G C ++ Y G++ + LR R PP D NR
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARR---PPGMEYSYDINRVPEEQMTFKDL 159
Query: 406 MHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV-T 464
+ ARG+ YL Q K IHRD+ A N+L+ E+ + DFGLA+ ++ D + T
Sbjct: 160 VSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNT 216
Query: 465 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT 502
T R V +APE L + ++DV+ FGVL+ E+ T
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 103/218 (47%), Gaps = 32/218 (14%)
Query: 311 LGQGGYGVVY--------KGCLPNRMVVAVKRLKDPNFTGEV-QFQTEVEMIGL-ALHRN 360
LG+G +G V K + VAVK LKD ++ +E+EM+ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 361 LLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPP-----LDWNR----------R 405
++ L G C ++ Y G++ + LR R PP D NR
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARR---PPGMEYSYDINRVPEEQMTFKDL 159
Query: 406 MHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSH-VT 464
+ ARG+ YL Q K IHRD+ A N+L+ E+ + DFGLA+ ++ D + T
Sbjct: 160 VSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 465 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT 502
T R V +APE L + ++DV+ FGVL+ E+ T
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 121/282 (42%), Gaps = 53/282 (18%)
Query: 311 LGQGGYGVVYKGCLPN------RMVVAVKRLKD-PNFTGEVQFQTEVE-MIGLALHRNLL 362
LGQG +G+VY+G + VAVK + + + ++F E M G H +++
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVV 82
Query: 363 RLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQ------AKPPLDWNRRMHIALGTARGL 416
RL G + L+V M +G + LR R +PP + +A A G+
Sbjct: 83 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 142
Query: 417 LYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRG------T 470
YL+ + K +HRD+ A N ++ F +GDFG+ RD + T R
Sbjct: 143 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMT-----RDIYETDYYRKGGKGLLP 194
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLEL--ITGQKALDVGNGQVQKGMILDCVRTLHE 528
V +APE L G + +D++ FGV+L E+ + Q + N QV K ++D
Sbjct: 195 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK-FVMDG------ 247
Query: 529 ERRLDVLIDRDLKGSFDPTE--LEKMVQLALQCTQSHPNLRP 568
G D + E++ L C Q +P +RP
Sbjct: 248 -------------GYLDQPDNCPERVTDLMRMCWQFNPKMRP 276
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 103/218 (47%), Gaps = 32/218 (14%)
Query: 311 LGQGGYGVVY--------KGCLPNRMVVAVKRLKDPNFTGEV-QFQTEVEMIGL-ALHRN 360
LG+G +G V K + VAVK LKD ++ +E+EM+ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 361 LLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPP-----LDWNR----------R 405
++ L G C ++ Y G++ + LR R PP D NR
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARR---PPGMEYSYDINRVPEEQMTFKDL 159
Query: 406 MHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSH-VT 464
+ ARG+ YL Q K IHRD+ A N+L+ E+ + DFGLA+ ++ D + T
Sbjct: 160 VSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 465 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT 502
T R V +APE L + ++DV+ FGVL+ E+ T
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 113/251 (45%), Gaps = 21/251 (8%)
Query: 269 YRSRLLFTSYVQQDYEFDVGHL-KRFSFREL-QIATGNFSPKNILGQGGYGVVYKGCL-- 324
Y+ L TS + DY + K S +L ++ N + LG G +G VY+G +
Sbjct: 35 YKLSKLRTSTIMTDYNPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSG 94
Query: 325 ----PNRMVVAVKRLKDP-NFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYP 379
P+ + VAVK L + + E+ F E +I H+N++R G + R ++
Sbjct: 95 MPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLE 154
Query: 380 YMPNGSVADCLRDTRQAKPPLDWNRRM----HIALGTARGLLYLHEQCNPKIIHRDVKAA 435
M G + LR+TR +P + M H+A A G YL E IHRD+ A
Sbjct: 155 LMAGGDLKSFLRETR-PRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAAR 210
Query: 436 NILLD---ESFEAVVGDFGLAKLLDRRDSHVTTAVRG-TVGHIAPEYLSTGQSSEKTDVF 491
N LL A +GDFG+A+ + R + V + PE G + KTD +
Sbjct: 211 NCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 270
Query: 492 GFGVLLLELIT 502
FGVLL E+ +
Sbjct: 271 SFGVLLWEIFS 281
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 121/278 (43%), Gaps = 45/278 (16%)
Query: 311 LGQGGYGVVYKGCLPN------RMVVAVKRLKD-PNFTGEVQFQTEVE-MIGLALHRNLL 362
LGQG +G+VY+G + VAVK + + + ++F E M G H +++
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVV 80
Query: 363 RLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQ------AKPPLDWNRRMHIALGTARGL 416
RL G + L+V M +G + LR R +PP + +A A G+
Sbjct: 81 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 140
Query: 417 LYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRG--TVGHI 474
YL+ + K +HRD+ A N ++ F +GDFG+ + + D +G V +
Sbjct: 141 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDX-XRKGGKGLLPVRWM 196
Query: 475 APEYLSTGQSSEKTDVFGFGVLLLEL--ITGQKALDVGNGQVQKGMILDCVRTLHEERRL 532
APE L G + +D++ FGV+L E+ + Q + N QV K ++D
Sbjct: 197 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK-FVMDG---------- 245
Query: 533 DVLIDRDLKGSFDPTE--LEKMVQLALQCTQSHPNLRP 568
G D + E++ L C Q +P +RP
Sbjct: 246 ---------GYLDQPDNCPERVTDLMRMCWQFNPKMRP 274
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 121/278 (43%), Gaps = 45/278 (16%)
Query: 311 LGQGGYGVVYKGCLPN------RMVVAVKRLKD-PNFTGEVQFQTEVE-MIGLALHRNLL 362
LGQG +G+VY+G + VAVK + + + ++F E M G H +++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVV 83
Query: 363 RLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQ------AKPPLDWNRRMHIALGTARGL 416
RL G + L+V M +G + LR R +PP + +A A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 417 LYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRG--TVGHI 474
YL+ + K +HRD+ A N ++ F +GDFG+ + + D +G V +
Sbjct: 144 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDX-XRKGGKGLLPVRWM 199
Query: 475 APEYLSTGQSSEKTDVFGFGVLLLEL--ITGQKALDVGNGQVQKGMILDCVRTLHEERRL 532
APE L G + +D++ FGV+L E+ + Q + N QV K ++D
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK-FVMDG---------- 248
Query: 533 DVLIDRDLKGSFDPTE--LEKMVQLALQCTQSHPNLRP 568
G D + E++ L C Q +P +RP
Sbjct: 249 ---------GYLDQPDNCPERVTDLMRMCWQFNPKMRP 277
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 103/218 (47%), Gaps = 32/218 (14%)
Query: 311 LGQGGYGVVY--------KGCLPNRMVVAVKRLKDPNFTGEV-QFQTEVEMIGL-ALHRN 360
LG+G +G V K + VAVK LKD ++ +E+EM+ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 361 LLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPP-----LDWNR----------R 405
++ L G C ++ Y G++ + LR R PP D NR
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARR---PPGMEYSYDINRVPEEQMTFKDL 159
Query: 406 MHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSH-VT 464
+ ARG+ YL Q K IHRD+ A N+L+ E+ + DFGLA+ ++ D + T
Sbjct: 160 VSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 465 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT 502
T R V +APE L + ++DV+ FGVL+ E+ T
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 114/250 (45%), Gaps = 19/250 (7%)
Query: 269 YRSRLLFTSYVQQDYEFDVGHL-KRFSFREL-QIATGNFSPKNILGQGGYGVVYKGCL-- 324
Y+ L TS + DY + K S +L ++ N + LG G +G VY+G +
Sbjct: 12 YKLSKLRTSTIMTDYNPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSG 71
Query: 325 ----PNRMVVAVKRLKDP-NFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYP 379
P+ + VAVK L + + E+ F E +I H+N++R G + R ++
Sbjct: 72 MPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLE 131
Query: 380 YMPNGSVADCLRDT--RQAKP-PLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAAN 436
M G + LR+T R ++P L +H+A A G YL E IHRD+ A N
Sbjct: 132 LMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARN 188
Query: 437 ILLD---ESFEAVVGDFGLAKLLDRRDSHVTTAVRG-TVGHIAPEYLSTGQSSEKTDVFG 492
LL A +GDFG+A+ + R + V + PE G + KTD +
Sbjct: 189 CLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWS 248
Query: 493 FGVLLLELIT 502
FGVLL E+ +
Sbjct: 249 FGVLLWEIFS 258
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 103/218 (47%), Gaps = 32/218 (14%)
Query: 311 LGQGGYGVVY--------KGCLPNRMVVAVKRLKDPNFTGEV-QFQTEVEMIGL-ALHRN 360
LG+G +G V K + VAVK LKD ++ +E+EM+ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 361 LLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPP-----LDWNR----------R 405
++ L G C ++ Y G++ + LR R PP D NR
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARR---PPGMEYSYDINRVPEEQMTFKDL 159
Query: 406 MHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSH-VT 464
+ ARG+ YL Q K IHRD+ A N+L+ E+ + DFGLA+ ++ D + T
Sbjct: 160 VSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKT 216
Query: 465 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT 502
T R V +APE L + ++DV+ FGVL+ E+ T
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 103/218 (47%), Gaps = 32/218 (14%)
Query: 311 LGQGGYGVVY--------KGCLPNRMVVAVKRLKDPNFTGEV-QFQTEVEMIGL-ALHRN 360
LG+G +G V K + VAVK LKD ++ +E+EM+ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 361 LLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPP-----LDWNR----------R 405
++ L G C ++ Y G++ + LR R PP D NR
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARR---PPGMEYSYDINRVPEEQMTFKDL 159
Query: 406 MHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSH-VT 464
+ ARG+ YL Q K IHRD+ A N+L+ E+ + DFGLA+ ++ D + T
Sbjct: 160 VSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 465 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT 502
T R V +APE L + ++DV+ FGVL+ E+ T
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 112/245 (45%), Gaps = 37/245 (15%)
Query: 284 EFDVGHLKRFSFRELQIATGNFSPKNILGQGGYGVVY--------KGCLPNRMVVAVKRL 335
E+++ ++ F ++ G LG+G +G V K + VAVK L
Sbjct: 21 EYELPEDPKWEFPRDKLTLGK-----PLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML 75
Query: 336 KDPNFTGEV-QFQTEVEMIGL-ALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDT 393
KD ++ +E+EM+ + H+N++ L G C ++ Y G++ + LR
Sbjct: 76 KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRAR 135
Query: 394 RQAKPP-----LDWNR----------RMHIALGTARGLLYLHEQCNPKIIHRDVKAANIL 438
R PP D NR + ARG+ YL Q K IHRD+ A N+L
Sbjct: 136 R---PPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVL 189
Query: 439 LDESFEAVVGDFGLAKLLDRRD-SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLL 497
+ E+ + DFGLA+ ++ D TT R V +APE L + ++DV+ FGVL+
Sbjct: 190 VTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 498 LELIT 502
E+ T
Sbjct: 250 WEIFT 254
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 97/206 (47%), Gaps = 17/206 (8%)
Query: 311 LGQGGYGVVYKGCL------PNRMVVAVKRLKDP-NFTGEVQFQTEVEMIGLALHRNLLR 363
LG G +G VY+G + P+ + VAVK L + + E+ F E +I H+N++R
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 364 LYGFCMTPEERLLVYPYMPNGSVADCLRDT--RQAKP-PLDWNRRMHIALGTARGLLYLH 420
G + R ++ M G + LR+T R ++P L +H+A A G YL
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 421 EQCNPKIIHRDVKAANILLD---ESFEAVVGDFGLAKLLDRRDSHVTTAVRG-TVGHIAP 476
E IHRD+ A N LL A +GDFG+A+ + R + V + P
Sbjct: 158 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 477 EYLSTGQSSEKTDVFGFGVLLLELIT 502
E G + KTD + FGVLL E+ +
Sbjct: 215 EAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 112/252 (44%), Gaps = 30/252 (11%)
Query: 270 RSRLLFTSYVQQDYEF-----DVGHLKRFSFRELQIATGNFSPKNILGQGGYGVVYKGCL 324
R+ + T Y +Y F + LK + + + G LG G +G VY+G +
Sbjct: 1 RTSTIMTDY-NPNYSFAGKTSSISDLKEVPRKNITLIRG-------LGHGAFGEVYEGQV 52
Query: 325 ------PNRMVVAVKRLKDP-NFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLV 377
P+ + VAVK L + + E+ F E +I H+N++R G + R ++
Sbjct: 53 SGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFIL 112
Query: 378 YPYMPNGSVADCLRDT--RQAKP-PLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKA 434
M G + LR+T R ++P L +H+A A G YL E IHRD+ A
Sbjct: 113 LELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAA 169
Query: 435 ANILLD---ESFEAVVGDFGLAKLLDRRDSHVTTAVRG-TVGHIAPEYLSTGQSSEKTDV 490
N LL A +GDFG+A+ + R + V + PE G + KTD
Sbjct: 170 RNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDT 229
Query: 491 FGFGVLLLELIT 502
+ FGVLL E+ +
Sbjct: 230 WSFGVLLWEIFS 241
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 97/206 (47%), Gaps = 17/206 (8%)
Query: 311 LGQGGYGVVYKGCL------PNRMVVAVKRLKDP-NFTGEVQFQTEVEMIGLALHRNLLR 363
LG G +G VY+G + P+ + VAVK L + + E+ F E +I H+N++R
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 364 LYGFCMTPEERLLVYPYMPNGSVADCLRDT--RQAKP-PLDWNRRMHIALGTARGLLYLH 420
G + R ++ M G + LR+T R ++P L +H+A A G YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 421 EQCNPKIIHRDVKAANILLD---ESFEAVVGDFGLAKLLDRRDSHVTTAVRG-TVGHIAP 476
E IHRD+ A N LL A +GDFG+A+ + R + V + P
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 477 EYLSTGQSSEKTDVFGFGVLLLELIT 502
E G + KTD + FGVLL E+ +
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 112/245 (45%), Gaps = 37/245 (15%)
Query: 284 EFDVGHLKRFSFRELQIATGNFSPKNILGQGGYGVVY--------KGCLPNRMVVAVKRL 335
E+++ ++ F ++ G LG+G +G V K + VAVK L
Sbjct: 21 EYELPEDPKWEFPRDKLTLGK-----PLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML 75
Query: 336 KDPNFTGEV-QFQTEVEMIGL-ALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDT 393
KD ++ +E+EM+ + H+N++ L G C ++ Y G++ + LR
Sbjct: 76 KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRAR 135
Query: 394 RQAKPP-----LDWNR----------RMHIALGTARGLLYLHEQCNPKIIHRDVKAANIL 438
R PP D NR + ARG+ YL Q K IHRD+ A N+L
Sbjct: 136 R---PPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVL 189
Query: 439 LDESFEAVVGDFGLAKLLDRRD-SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLL 497
+ E+ + DFGLA+ ++ D TT R V +APE L + ++DV+ FGVL+
Sbjct: 190 VTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 498 LELIT 502
E+ T
Sbjct: 250 WEIFT 254
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 97/206 (47%), Gaps = 17/206 (8%)
Query: 311 LGQGGYGVVYKGCL------PNRMVVAVKRLKDP-NFTGEVQFQTEVEMIGLALHRNLLR 363
LG G +G VY+G + P+ + VAVK L + + E+ F E +I H+N++R
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 364 LYGFCMTPEERLLVYPYMPNGSVADCLRDT--RQAKP-PLDWNRRMHIALGTARGLLYLH 420
G + R ++ M G + LR+T R ++P L +H+A A G YL
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 421 EQCNPKIIHRDVKAANILLD---ESFEAVVGDFGLAKLLDRRDSHVTTAVRG-TVGHIAP 476
E IHRD+ A N LL A +GDFG+A+ + R + V + P
Sbjct: 158 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 477 EYLSTGQSSEKTDVFGFGVLLLELIT 502
E G + KTD + FGVLL E+ +
Sbjct: 215 EAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 95/203 (46%), Gaps = 13/203 (6%)
Query: 305 FSPKNILGQGGYGVVYKGCLPNR--MVVAVKRLK-DPNFTGEVQFQTEVEMIGLALHRNL 361
F+ +G+G +G V+KG + NR VVA+K + + Q E+ ++ +
Sbjct: 25 FTKLERIGKGSFGEVFKG-IDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYV 83
Query: 362 LRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHE 421
+ YG + + ++ Y+ GS D LR P D + + +GL YLH
Sbjct: 84 TKYYGSYLKGSKLWIIMEYLGGGSALDLLRAG-----PFDEFQIATMLKEILKGLDYLHS 138
Query: 422 QCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLST 481
+ K IHRD+KAAN+LL E + + DFG+A L T V GT +APE +
Sbjct: 139 E---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIQQ 194
Query: 482 GQSSEKTDVFGFGVLLLELITGQ 504
K D++ G+ +EL G+
Sbjct: 195 SAYDSKADIWSLGITAIELAKGE 217
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 97/206 (47%), Gaps = 17/206 (8%)
Query: 311 LGQGGYGVVYKGCL------PNRMVVAVKRLKDP-NFTGEVQFQTEVEMIGLALHRNLLR 363
LG G +G VY+G + P+ + VAVK L + + E+ F E +I H+N++R
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 364 LYGFCMTPEERLLVYPYMPNGSVADCLRDT--RQAKP-PLDWNRRMHIALGTARGLLYLH 420
G + R ++ M G + LR+T R ++P L +H+A A G YL
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 421 EQCNPKIIHRDVKAANILLD---ESFEAVVGDFGLAKLLDRRDSHVTTAVRG-TVGHIAP 476
E IHRD+ A N LL A +GDFG+A+ + R + V + P
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 477 EYLSTGQSSEKTDVFGFGVLLLELIT 502
E G + KTD + FGVLL E+ +
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 97/206 (47%), Gaps = 17/206 (8%)
Query: 311 LGQGGYGVVYKGCL------PNRMVVAVKRLKDP-NFTGEVQFQTEVEMIGLALHRNLLR 363
LG G +G VY+G + P+ + VAVK L + + E+ F E +I H+N++R
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 364 LYGFCMTPEERLLVYPYMPNGSVADCLRDT--RQAKP-PLDWNRRMHIALGTARGLLYLH 420
G + R ++ M G + LR+T R ++P L +H+A A G YL
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 421 EQCNPKIIHRDVKAANILLD---ESFEAVVGDFGLAKLLDRRDSHVTTAVRG-TVGHIAP 476
E IHRD+ A N LL A +GDFG+A+ + R + V + P
Sbjct: 150 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 206
Query: 477 EYLSTGQSSEKTDVFGFGVLLLELIT 502
E G + KTD + FGVLL E+ +
Sbjct: 207 EAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 103/218 (47%), Gaps = 32/218 (14%)
Query: 311 LGQGGYGVVY--------KGCLPNRMVVAVKRLKDPNFTGEV-QFQTEVEMIGL-ALHRN 360
LG+G +G V K + VAVK LKD ++ +E+EM+ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 361 LLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPP-----LDWNR----------R 405
++ L G C ++ Y G++ + LR R PP D NR
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARR---PPGMEYSYDINRVPEEQMTFKDL 159
Query: 406 MHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSH-VT 464
+ ARG+ YL Q K IHRD+ A N+L+ E+ + DFGLA+ ++ D + T
Sbjct: 160 VSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 465 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT 502
T R V +APE L + ++DV+ FGVL+ E+ T
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 112/252 (44%), Gaps = 30/252 (11%)
Query: 270 RSRLLFTSYVQQDYEF-----DVGHLKRFSFRELQIATGNFSPKNILGQGGYGVVYKGCL 324
R+ + T Y +Y F + LK + + + G LG G +G VY+G +
Sbjct: 1 RTSTIMTDY-NPNYSFAGKTSSISDLKEVPRKNITLIRG-------LGHGAFGEVYEGQV 52
Query: 325 ------PNRMVVAVKRLKDP-NFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLV 377
P+ + VAVK L + + E+ F E +I H+N++R G + R ++
Sbjct: 53 SGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFIL 112
Query: 378 YPYMPNGSVADCLRDT--RQAKP-PLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKA 434
M G + LR+T R ++P L +H+A A G YL E IHRD+ A
Sbjct: 113 LELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAA 169
Query: 435 ANILLD---ESFEAVVGDFGLAKLLDRRDSHVTTAVRG-TVGHIAPEYLSTGQSSEKTDV 490
N LL A +GDFG+A+ + R + V + PE G + KTD
Sbjct: 170 RNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDT 229
Query: 491 FGFGVLLLELIT 502
+ FGVLL E+ +
Sbjct: 230 WSFGVLLWEIFS 241
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 97/206 (47%), Gaps = 17/206 (8%)
Query: 311 LGQGGYGVVYKGCL------PNRMVVAVKRLKDP-NFTGEVQFQTEVEMIGLALHRNLLR 363
LG G +G VY+G + P+ + VAVK L + + E+ F E +I H+N++R
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 364 LYGFCMTPEERLLVYPYMPNGSVADCLRDT--RQAKP-PLDWNRRMHIALGTARGLLYLH 420
G + R ++ M G + LR+T R ++P L +H+A A G YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 421 EQCNPKIIHRDVKAANILLD---ESFEAVVGDFGLAKLLDRRDSHVTTAVRG-TVGHIAP 476
E IHRD+ A N LL A +GDFG+A+ + R + V + P
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 477 EYLSTGQSSEKTDVFGFGVLLLELIT 502
E G + KTD + FGVLL E+ +
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 112/252 (44%), Gaps = 30/252 (11%)
Query: 270 RSRLLFTSYVQQDYEF-----DVGHLKRFSFRELQIATGNFSPKNILGQGGYGVVYKGCL 324
R+ + T Y +Y F + LK + + + G LG G +G VY+G +
Sbjct: 1 RTSTIMTDY-NPNYSFAGKTSSISDLKEVPRKNITLIRG-------LGHGAFGEVYEGQV 52
Query: 325 ------PNRMVVAVKRLKDP-NFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLV 377
P+ + VAVK L + + E+ F E +I H+N++R G + R ++
Sbjct: 53 SGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFIL 112
Query: 378 YPYMPNGSVADCLRDT--RQAKP-PLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKA 434
M G + LR+T R ++P L +H+A A G YL E IHRD+ A
Sbjct: 113 LELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAA 169
Query: 435 ANILLD---ESFEAVVGDFGLAKLLDRRDSHVTTAVRG-TVGHIAPEYLSTGQSSEKTDV 490
N LL A +GDFG+A+ + R + V + PE G + KTD
Sbjct: 170 RNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDT 229
Query: 491 FGFGVLLLELIT 502
+ FGVLL E+ +
Sbjct: 230 WSFGVLLWEIFS 241
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 113/245 (46%), Gaps = 37/245 (15%)
Query: 284 EFDVGHLKRFSFRELQIATGNFSPKNILGQGGYGVVY--------KGCLPNRMVVAVKRL 335
E+++ ++ F ++ G LG+G +G V K + VAVK L
Sbjct: 10 EYELPEDPKWEFPRDKLTLGK-----PLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKML 64
Query: 336 KDPNFTGEV-QFQTEVEMIGL-ALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDT 393
KD ++ +E+EM+ + H+N++ L G C ++ Y G++ + LR
Sbjct: 65 KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRAR 124
Query: 394 RQAKPP-----LDWNR----------RMHIALGTARGLLYLHEQCNPKIIHRDVKAANIL 438
R PP D NR + ARG+ YL Q K IHRD+ A N+L
Sbjct: 125 R---PPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVL 178
Query: 439 LDESFEAVVGDFGLAKLLDRRDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLL 497
+ E+ + DFGLA+ ++ D + TT R V +APE L + ++DV+ FGVL+
Sbjct: 179 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 238
Query: 498 LELIT 502
E+ T
Sbjct: 239 WEIFT 243
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 113/245 (46%), Gaps = 37/245 (15%)
Query: 284 EFDVGHLKRFSFRELQIATGNFSPKNILGQGGYGVVY--------KGCLPNRMVVAVKRL 335
E+++ ++ F ++ G LG+G +G V K + VAVK L
Sbjct: 8 EYELPEDPKWEFPRDKLTLGK-----PLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKML 62
Query: 336 KDPNFTGEV-QFQTEVEMIGL-ALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDT 393
KD ++ +E+EM+ + H+N++ L G C ++ Y G++ + LR
Sbjct: 63 KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRAR 122
Query: 394 RQAKPP-----LDWNR----------RMHIALGTARGLLYLHEQCNPKIIHRDVKAANIL 438
R PP D NR + ARG+ YL Q K IHRD+ A N+L
Sbjct: 123 R---PPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLTARNVL 176
Query: 439 LDESFEAVVGDFGLAKLLDRRDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLL 497
+ E+ + DFGLA+ ++ D + TT R V +APE L + ++DV+ FGVL+
Sbjct: 177 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 236
Query: 498 LELIT 502
E+ T
Sbjct: 237 WEIFT 241
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 96/204 (47%), Gaps = 15/204 (7%)
Query: 305 FSPKNILGQGGYGVVYKGCLPNRM--VVAVKRLK-DPNFTGEVQFQTEVEMIGLALHRNL 361
F+ +G+G +G V+KG + NR VVA+K + + Q E+ ++ +
Sbjct: 24 FTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 82
Query: 362 LRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHE 421
+ YG + + ++ Y+ GS D L PLD + I +GL YLH
Sbjct: 83 TKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG-----PLDETQIATILREILKGLDYLHS 137
Query: 422 QCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVT-TAVRGTVGHIAPEYLS 480
+ K IHRD+KAAN+LL E E + DFG+A L D+ + GT +APE +
Sbjct: 138 E---KKIHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNXFVGTPFWMAPEVIK 192
Query: 481 TGQSSEKTDVFGFGVLLLELITGQ 504
K D++ G+ +EL G+
Sbjct: 193 QSAYDSKADIWSLGITAIELARGE 216
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 113/245 (46%), Gaps = 37/245 (15%)
Query: 284 EFDVGHLKRFSFRELQIATGNFSPKNILGQGGYGVVY--------KGCLPNRMVVAVKRL 335
E+++ ++ F ++ G LG+G +G V K + VAVK L
Sbjct: 13 EYELPEDPKWEFPRDKLTLGK-----PLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKML 67
Query: 336 KDPNFTGEV-QFQTEVEMIGL-ALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDT 393
KD ++ +E+EM+ + H+N++ L G C ++ Y G++ + LR
Sbjct: 68 KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRAR 127
Query: 394 RQAKPP-----LDWNR----------RMHIALGTARGLLYLHEQCNPKIIHRDVKAANIL 438
R PP D NR + ARG+ YL Q K IHRD+ A N+L
Sbjct: 128 R---PPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVL 181
Query: 439 LDESFEAVVGDFGLAKLLDRRDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLL 497
+ E+ + DFGLA+ ++ D + TT R V +APE L + ++DV+ FGVL+
Sbjct: 182 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 241
Query: 498 LELIT 502
E+ T
Sbjct: 242 WEIFT 246
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 99/207 (47%), Gaps = 21/207 (10%)
Query: 305 FSPKNILGQGGYGVVYKGCLPNRM--VVAVKRLK-DPNFTGEVQFQTEVEMIGLALHRNL 361
F+ +G+G +G V+KG + NR VVA+K + + Q E+ ++ +
Sbjct: 9 FTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 67
Query: 362 LRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHE 421
+ YG + + ++ Y+ GS D L PLD + I +GL YLH
Sbjct: 68 TKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG-----PLDETQIATILREILKGLDYLHS 122
Query: 422 QCNPKIIHRDVKAANILLDESFEAVVGDFGLA-KLLD---RRDSHVTTAVRGTVGHIAPE 477
+ K IHRD+KAAN+LL E E + DFG+A +L D +R+ V GT +APE
Sbjct: 123 E---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-----GTPFWMAPE 174
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQ 504
+ K D++ G+ +EL G+
Sbjct: 175 VIKQSAYDSKADIWSLGITAIELARGE 201
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 113/245 (46%), Gaps = 37/245 (15%)
Query: 284 EFDVGHLKRFSFRELQIATGNFSPKNILGQGGYGVVY--------KGCLPNRMVVAVKRL 335
E+++ ++ F ++ G LG+G +G V K + VAVK L
Sbjct: 67 EYELPEDPKWEFPRDKLTLGK-----PLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKML 121
Query: 336 KDPNFTGEV-QFQTEVEMIGL-ALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDT 393
KD ++ +E+EM+ + H+N++ L G C ++ Y G++ + LR
Sbjct: 122 KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRAR 181
Query: 394 RQAKPP-----LDWNR----------RMHIALGTARGLLYLHEQCNPKIIHRDVKAANIL 438
R PP D NR + ARG+ YL Q K IHRD+ A N+L
Sbjct: 182 R---PPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVL 235
Query: 439 LDESFEAVVGDFGLAKLLDRRDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLL 497
+ E+ + DFGLA+ ++ D + TT R V +APE L + ++DV+ FGVL+
Sbjct: 236 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 295
Query: 498 LELIT 502
E+ T
Sbjct: 296 WEIFT 300
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 130/275 (47%), Gaps = 37/275 (13%)
Query: 308 KNILGQGGYGVVYKG--CLPNR--MVVAVKRLKDPNFTGEVQ--FQTEVEMIGLALHRNL 361
+ ++G G +G V G LP + + VA+K LK +T + + F +E ++G H N+
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKS-GYTEKQRRDFLSEASIMGQFDHPNV 70
Query: 362 LRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHE 421
+ L G +++ +M NGS+ LR Q + + + G A G+ YL +
Sbjct: 71 IHLEGVVTKSTPVMIITEFMENGSLDSFLR---QNDGQFTVIQLVGMLRGIAAGMKYLAD 127
Query: 422 QCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGTVG--HIAPE 477
+HR + A NIL++ + V DFGL++ L D D T+A+ G + APE
Sbjct: 128 M---NYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPE 184
Query: 478 YLSTGQSSEKTDVFGFGVLLLELIT-GQKAL-DVGNGQVQKGMILDCVRTLHEERRLDVL 535
+ + + +DV+ +G+++ E+++ G++ D+ N D + + ++ RL
Sbjct: 185 AIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQ--------DVINAIEQDYRLPPP 236
Query: 536 IDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKM 570
+D P+ L QL L C Q N RPK
Sbjct: 237 MDC-------PSALH---QLMLDCWQKDRNHRPKF 261
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 124/294 (42%), Gaps = 49/294 (16%)
Query: 297 ELQIATGNFSPKNILGQGGYGVVYKGCLPN------RMVVAVKRLKDPNFTGE-VQFQTE 349
E ++A + LGQG +G+VY+G VA+K + + E ++F E
Sbjct: 9 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 68
Query: 350 VEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKP------PLDWN 403
++ +++RL G + L++ M G + LR R A P +
Sbjct: 69 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLS 128
Query: 404 RRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV 463
+ + +A A G+ YL+ K +HRD+ A N ++ E F +GDFG+ RD +
Sbjct: 129 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT-----RDIYE 180
Query: 464 TTAVRG------TVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT--GQKALDVGNGQVQ 515
T R V ++PE L G + +DV+ FGV+L E+ T Q + N QV
Sbjct: 181 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV- 239
Query: 516 KGMILDCVRTLHEERRLDVLIDRDLKGSFDPTELEKMV-QLALQCTQSHPNLRP 568
+R + E LD P M+ +L C Q +P +RP
Sbjct: 240 -------LRFVMEGGLLD-----------KPDNCPDMLFELMRMCWQYNPKMRP 275
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 124/294 (42%), Gaps = 49/294 (16%)
Query: 297 ELQIATGNFSPKNILGQGGYGVVYKGCLPN------RMVVAVKRLKDPNFTGE-VQFQTE 349
E ++A + LGQG +G+VY+G VA+K + + E ++F E
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 78
Query: 350 VEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKP------PLDWN 403
++ +++RL G + L++ M G + LR R A P +
Sbjct: 79 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLS 138
Query: 404 RRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV 463
+ + +A A G+ YL+ K +HRD+ A N ++ E F +GDFG+ RD +
Sbjct: 139 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT-----RDIYE 190
Query: 464 TTAVRG------TVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT--GQKALDVGNGQVQ 515
T R V ++PE L G + +DV+ FGV+L E+ T Q + N QV
Sbjct: 191 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV- 249
Query: 516 KGMILDCVRTLHEERRLDVLIDRDLKGSFDPTELEKMV-QLALQCTQSHPNLRP 568
+R + E LD P M+ +L C Q +P +RP
Sbjct: 250 -------LRFVMEGGLLD-----------KPDNCPDMLFELMRMCWQYNPKMRP 285
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 131/280 (46%), Gaps = 47/280 (16%)
Query: 308 KNILGQGGYGVVYKGCL--PNRM--VVAVKRLKDPNFT--GEVQFQTEVEMIGLALHRNL 361
+ ++G G +G V +G L P + VA+K LK +T +F +E ++G H N+
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKG-GYTERQRREFLSEASIMGQFEHPNI 77
Query: 362 LRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIAL-----GTARGL 416
+RL G +++ +M NG++ LR L+ + I L G A G+
Sbjct: 78 IRLEGVVTNSMPVMILTEFMENGALDSFLR--------LNDGQFTVIQLVGMLRGIASGM 129
Query: 417 LYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRR--DSHVTTAVRGTVG-- 472
YL E +HRD+ A NIL++ + V DFGL++ L+ D T+++ G +
Sbjct: 130 RYLAEM---SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIR 186
Query: 473 HIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKAL-DVGNGQVQKGMILDCVRTLHEER 530
APE ++ + + +D + +G+++ E+++ G++ D+ N D + + ++
Sbjct: 187 WTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQ--------DVINAIEQDY 238
Query: 531 RLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKM 570
RL D PT L QL L C Q N RP+
Sbjct: 239 RLPPPPD-------CPTSLH---QLMLDCWQKDRNARPRF 268
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 125/285 (43%), Gaps = 50/285 (17%)
Query: 311 LGQGGYG-VVYKGCL------PNRMV-VAVKRLK-DPNFTGEVQFQTEVEMIGL-ALHRN 360
LG+G +G VV + PNR+ VAVK LK D +E+EM+ + H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 361 LLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPP----------------LDWNR 404
++ L G C ++ Y G+ LR+ QA+ P L
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGN----LREYLQAREPPGLEYSYNPSHNPEEQLSSKD 151
Query: 405 RMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSH-V 463
+ A ARG+ YL + K IHRD+ A N+L+ E + DFGLA+ + D +
Sbjct: 152 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 464 TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCV 523
TT R V +APE L + ++DV+ FGVLL E+ T +G + +
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT------LGGSPYPGVPVEELF 262
Query: 524 RTLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRP 568
+ L E R+D K S EL M++ C + P+ RP
Sbjct: 263 KLLKEGHRMD-------KPSNCTNELYMMMR---DCWHAVPSQRP 297
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 124/281 (44%), Gaps = 42/281 (14%)
Query: 311 LGQGGYG-VVYKGCL------PNRMV-VAVKRLK-DPNFTGEVQFQTEVEMIGL-ALHRN 360
LG+G +G VV + PNR+ VAVK LK D +E+EM+ + H+N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 361 LLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRR------------MHI 408
++ L G C ++ Y G++ + L+ R +N +
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 409 ALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSH-VTTAV 467
A ARG+ YL + K IHRD+ A N+L+ E + DFGLA+ + D + TT
Sbjct: 197 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 253
Query: 468 RGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLH 527
R V +APE L + ++DV+ FGVLL E+ T +G + + + L
Sbjct: 254 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT------LGGSPYPGVPVEELFKLLK 307
Query: 528 EERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRP 568
E R+D K S EL M++ C + P+ RP
Sbjct: 308 EGHRMD-------KPSNCTNELYMMMR---DCWHAVPSQRP 338
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 127/283 (44%), Gaps = 46/283 (16%)
Query: 311 LGQGGYG-VVYKGCL------PNRMV-VAVKRLK-DPNFTGEVQFQTEVEMIGL-ALHRN 360
LG+G +G VV + PNR+ VAVK LK D +E+EM+ + H+N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 361 LLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRR--------------M 406
++ L G C ++ Y G++ + L+ R P L+++ +
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARR--PPGLEYSYNPSHNPEEQLSSKDLV 146
Query: 407 HIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSH-VTT 465
A ARG+ YL + K IHRD+ A N+L+ E + DFGLA+ + D + TT
Sbjct: 147 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 203
Query: 466 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
R V +APE L + ++DV+ FGVLL E+ T +G + + +
Sbjct: 204 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT------LGGSPYPGVPVEELFKL 257
Query: 526 LHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRP 568
L E R+D K S EL M++ C + P+ RP
Sbjct: 258 LKEGHRMD-------KPSNCTNELYMMMR---DCWHAVPSQRP 290
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 104/221 (47%), Gaps = 33/221 (14%)
Query: 311 LGQGGYGVVYK----GCLPNR--MVVAVKRLKDPNFTGEVQ--FQTEVEMIGLALHRNLL 362
+G+G +G V++ G LP +VAVK LK+ + ++Q FQ E ++ + N++
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKE-EASADMQADFQREAALMAEFDNPNIV 113
Query: 363 RLYGFCMTPEERLLVYPYMPNGSVADCLRD--------------------TRQAKPPLDW 402
+L G C + L++ YM G + + LR + PPL
Sbjct: 114 KLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSC 173
Query: 403 NRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSH 462
++ IA A G+ YL E+ K +HRD+ N L+ E+ + DFGL++ + D +
Sbjct: 174 AEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY 230
Query: 463 VTTAVRGT-VGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT 502
+ + PE + + + ++DV+ +GV+L E+ +
Sbjct: 231 KADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 124/281 (44%), Gaps = 42/281 (14%)
Query: 311 LGQGGYG-VVYKGCL------PNRMV-VAVKRLK-DPNFTGEVQFQTEVEMIGL-ALHRN 360
LG+G +G VV + PNR+ VAVK LK D +E+EM+ + H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 361 LLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRR------------MHI 408
++ L G C ++ Y G++ + L+ R +N +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 409 ALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSH-VTTAV 467
A ARG+ YL + K IHRD+ A N+L+ E + DFGLA+ + D + TT
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 468 RGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLH 527
R V +APE L + ++DV+ FGVLL E+ T +G + + + L
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT------LGGSPYPGVPVEELFKLLK 266
Query: 528 EERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRP 568
E R+D K S EL M++ C + P+ RP
Sbjct: 267 EGHRMD-------KPSNCTNELYMMMR---DCWHAVPSQRP 297
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 124/281 (44%), Gaps = 42/281 (14%)
Query: 311 LGQGGYG-VVYKGCL------PNRMV-VAVKRLK-DPNFTGEVQFQTEVEMIGL-ALHRN 360
LG+G +G VV + PNR+ VAVK LK D +E+EM+ + H+N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 361 LLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRR------------MHI 408
++ L G C ++ Y G++ + L+ R +N +
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 409 ALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSH-VTTAV 467
A ARG+ YL + K IHRD+ A N+L+ E + DFGLA+ + D + TT
Sbjct: 145 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 201
Query: 468 RGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLH 527
R V +APE L + ++DV+ FGVLL E+ T +G + + + L
Sbjct: 202 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT------LGGSPYPGVPVEELFKLLK 255
Query: 528 EERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRP 568
E R+D K S EL M++ C + P+ RP
Sbjct: 256 EGHRMD-------KPSNCTNELYMMMR---DCWHAVPSQRP 286
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 127/283 (44%), Gaps = 46/283 (16%)
Query: 311 LGQGGYG-VVYKGCL------PNRMV-VAVKRLK-DPNFTGEVQFQTEVEMIGL-ALHRN 360
LG+G +G VV + PNR+ VAVK LK D +E+EM+ + H+N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 361 LLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRR--------------M 406
++ L G C ++ Y G++ + L+ R P L+++ +
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARR--PPGLEYSYNPSHNPEEQLSSKDLV 145
Query: 407 HIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSH-VTT 465
A ARG+ YL + K IHRD+ A N+L+ E + DFGLA+ + D + TT
Sbjct: 146 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 202
Query: 466 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
R V +APE L + ++DV+ FGVLL E+ T +G + + +
Sbjct: 203 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT------LGGSPYPGVPVEELFKL 256
Query: 526 LHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRP 568
L E R+D K S EL M++ C + P+ RP
Sbjct: 257 LKEGHRMD-------KPSNCTNELYMMMR---DCWHAVPSQRP 289
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 131/281 (46%), Gaps = 33/281 (11%)
Query: 299 QIATGNFSPKNILGQGGYGVVYKG--CLPNR--MVVAVKRLKDPNFTGEVQ--FQTEVEM 352
+I + + ++G G +G V G LP + + VA+K LK +T + + F E +
Sbjct: 18 EIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLK-VGYTEKQRRDFLGEASI 76
Query: 353 IGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGT 412
+G H N++ L G + ++V YM NGS+ L+ + + + + G
Sbjct: 77 MGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVI---QLVGMLRGI 133
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGT 470
+ G+ YL + +HRD+ A NIL++ + V DFGL+++L D ++ T +
Sbjct: 134 SAGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 190
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNGQVQKGMILDCVRTLHEE 529
+ APE ++ + + +DV+ +G+++ E+++ G++ Q D ++ + E
Sbjct: 191 IRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQ-------DVIKAVEEG 243
Query: 530 RRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKM 570
RL +D P L QL L C Q N RPK
Sbjct: 244 YRLPSPMD-------CPAAL---YQLMLDCWQKERNSRPKF 274
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 131/280 (46%), Gaps = 47/280 (16%)
Query: 308 KNILGQGGYGVVYKGCL--PNRM--VVAVKRLKDPNFT--GEVQFQTEVEMIGLALHRNL 361
+ ++G G +G V +G L P + VA+K LK +T +F +E ++G H N+
Sbjct: 21 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKG-GYTERQRREFLSEASIMGQFEHPNI 79
Query: 362 LRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIAL-----GTARGL 416
+RL G +++ +M NG++ LR L+ + I L G A G+
Sbjct: 80 IRLEGVVTNSMPVMILTEFMENGALDSFLR--------LNDGQFTVIQLVGMLRGIASGM 131
Query: 417 LYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRR--DSHVTTAVRGTVG-- 472
YL E +HRD+ A NIL++ + V DFGL++ L+ D T+++ G +
Sbjct: 132 RYLAEMS---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIR 188
Query: 473 HIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKAL-DVGNGQVQKGMILDCVRTLHEER 530
APE ++ + + +D + +G+++ E+++ G++ D+ N D + + ++
Sbjct: 189 WTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQ--------DVINAIEQDY 240
Query: 531 RLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKM 570
RL D PT L QL L C Q N RP+
Sbjct: 241 RLPPPPD-------CPTSLH---QLMLDCWQKDRNARPRF 270
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 125/294 (42%), Gaps = 49/294 (16%)
Query: 297 ELQIATGNFSPKNILGQGGYGVVYKGCLPN------RMVVAVKRLKDPNFTGE-VQFQTE 349
E ++A + LGQG +G+VY+G VA+K + + E ++F E
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 71
Query: 350 VEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTR---QAKP---PLDWN 403
++ +++RL G + L++ M G + LR R + P P +
Sbjct: 72 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 131
Query: 404 RRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV 463
+ + +A A G+ YL+ K +HRD+ A N ++ E F +GDFG+ RD +
Sbjct: 132 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT-----RDIYE 183
Query: 464 TTAVRG------TVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT--GQKALDVGNGQVQ 515
T R V ++PE L G + +DV+ FGV+L E+ T Q + N QV
Sbjct: 184 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV- 242
Query: 516 KGMILDCVRTLHEERRLDVLIDRDLKGSFDPTELEKMV-QLALQCTQSHPNLRP 568
+R + E LD P M+ +L C Q +P +RP
Sbjct: 243 -------LRFVMEGGLLD-----------KPDNCPDMLFELMRMCWQYNPKMRP 278
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 125/294 (42%), Gaps = 49/294 (16%)
Query: 297 ELQIATGNFSPKNILGQGGYGVVYKGCLPN------RMVVAVKRLKDPNFTGE-VQFQTE 349
E ++A + LGQG +G+VY+G VA+K + + E ++F E
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 72
Query: 350 VEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTR---QAKP---PLDWN 403
++ +++RL G + L++ M G + LR R + P P +
Sbjct: 73 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 132
Query: 404 RRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV 463
+ + +A A G+ YL+ K +HRD+ A N ++ E F +GDFG+ RD +
Sbjct: 133 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT-----RDIYE 184
Query: 464 TTAVRG------TVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT--GQKALDVGNGQVQ 515
T R V ++PE L G + +DV+ FGV+L E+ T Q + N QV
Sbjct: 185 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV- 243
Query: 516 KGMILDCVRTLHEERRLDVLIDRDLKGSFDPTELEKMV-QLALQCTQSHPNLRP 568
+R + E LD P M+ +L C Q +P +RP
Sbjct: 244 -------LRFVMEGGLLD-----------KPDNCPDMLFELMRMCWQYNPKMRP 279
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 125/294 (42%), Gaps = 49/294 (16%)
Query: 297 ELQIATGNFSPKNILGQGGYGVVYKGCLPN------RMVVAVKRLKDPNFTGE-VQFQTE 349
E ++A + LGQG +G+VY+G VA+K + + E ++F E
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 71
Query: 350 VEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTR---QAKP---PLDWN 403
++ +++RL G + L++ M G + LR R + P P +
Sbjct: 72 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 131
Query: 404 RRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV 463
+ + +A A G+ YL+ K +HRD+ A N ++ E F +GDFG+ RD +
Sbjct: 132 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT-----RDIYE 183
Query: 464 TTAVRG------TVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT--GQKALDVGNGQVQ 515
T R V ++PE L G + +DV+ FGV+L E+ T Q + N QV
Sbjct: 184 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV- 242
Query: 516 KGMILDCVRTLHEERRLDVLIDRDLKGSFDPTELEKMV-QLALQCTQSHPNLRP 568
+R + E LD P M+ +L C Q +P +RP
Sbjct: 243 -------LRFVMEGGLLD-----------KPDNCPDMLFELMRMCWQYNPKMRP 278
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 129/275 (46%), Gaps = 39/275 (14%)
Query: 308 KNILGQGGYGVVYKGCLP----NRMVVAVKRLKDPNFTGEVQ--FQTEVEMIGLALHRNL 361
+ ++G G +G V G L + VA+K LK +T + + F +E ++G H N+
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLK-AGYTDKQRRDFLSEASIMGQFDHPNI 71
Query: 362 LRLYGFCMTPEERLLVYPYMPNGSVADCLR--DTRQAKPPLDWNRRMHIALGTARGLLYL 419
+ L G + +++ YM NGS+ LR D R L + + G G+ YL
Sbjct: 72 IHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQL-----VGMLRGIGSGMKYL 126
Query: 420 HEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGTVGHIAPE 477
+ +HRD+ A NIL++ + V DFG++++L D ++ T + + APE
Sbjct: 127 SDM---SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPE 183
Query: 478 YLSTGQSSEKTDVFGFGVLLLELIT-GQKAL-DVGNGQVQKGMILDCVRTLHEERRLDVL 535
++ + + +DV+ +G+++ E+++ G++ D+ N D ++ + E RL
Sbjct: 184 AIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ--------DVIKAIEEGYRLPPP 235
Query: 536 IDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKM 570
+D P L QL L C Q + RPK
Sbjct: 236 MD-------CPIALH---QLMLDCWQKERSDRPKF 260
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 125/294 (42%), Gaps = 49/294 (16%)
Query: 297 ELQIATGNFSPKNILGQGGYGVVYKGCLPN------RMVVAVKRLKDPNFTGE-VQFQTE 349
E ++A + LGQG +G+VY+G VA+K + + E ++F E
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 350 VEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTR---QAKP---PLDWN 403
++ +++RL G + L++ M G + LR R + P P +
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 125
Query: 404 RRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV 463
+ + +A A G+ YL+ K +HRD+ A N ++ E F +GDFG+ RD +
Sbjct: 126 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT-----RDIYE 177
Query: 464 TTAVRG------TVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT--GQKALDVGNGQVQ 515
T R V ++PE L G + +DV+ FGV+L E+ T Q + N QV
Sbjct: 178 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV- 236
Query: 516 KGMILDCVRTLHEERRLDVLIDRDLKGSFDPTELEKMV-QLALQCTQSHPNLRP 568
+R + E LD P M+ +L C Q +P +RP
Sbjct: 237 -------LRFVMEGGLLD-----------KPDNCPDMLFELMRMCWQYNPKMRP 272
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 125/285 (43%), Gaps = 50/285 (17%)
Query: 311 LGQGGYG-VVYKGCL------PNRMV-VAVKRLK-DPNFTGEVQFQTEVEMIGL-ALHRN 360
LG+G +G VV + PNR+ VAVK LK D +E+EM+ + H+N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 361 LLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPP----------------LDWNR 404
++ L G C ++ Y G+ LR+ QA+ P L
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGN----LREYLQARRPPGLEYCYNPSHNPEEQLSSKD 136
Query: 405 RMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSH-V 463
+ A ARG+ YL + K IHRD+ A N+L+ E + DFGLA+ + D +
Sbjct: 137 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 193
Query: 464 TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCV 523
TT R V +APE L + ++DV+ FGVLL E+ T +G + +
Sbjct: 194 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT------LGGSPYPGVPVEELF 247
Query: 524 RTLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRP 568
+ L E R+D K S EL M++ C + P+ RP
Sbjct: 248 KLLKEGHRMD-------KPSNCTNELYMMMR---DCWHAVPSQRP 282
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 94/210 (44%), Gaps = 13/210 (6%)
Query: 304 NFSPKNILGQGGYGVVYKG-CLPNRMVVAVKRLKDPNF--TGEVQ-FQTEVEMIGLALHR 359
+F N+LG+G + VY+ + + VA+K + G VQ Q EV++ H
Sbjct: 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHP 71
Query: 360 NLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYL 419
++L LY + LV NG + L++ + P N H G+LYL
Sbjct: 72 SILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVK---PFSENEARHFMHQIITGMLYL 128
Query: 420 HEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDR-RDSHVTTAVRGTVGHIAPEY 478
H I+HRD+ +N+LL + + DFGLA L + H T GT +I+PE
Sbjct: 129 HSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLC--GTPNYISPEI 183
Query: 479 LSTGQSSEKTDVFGFGVLLLELITGQKALD 508
+ ++DV+ G + L+ G+ D
Sbjct: 184 ATRSAHGLESDVWSLGCMFYTLLIGRPPFD 213
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 125/294 (42%), Gaps = 49/294 (16%)
Query: 297 ELQIATGNFSPKNILGQGGYGVVYKGCLPN------RMVVAVKRLKDPNFTGE-VQFQTE 349
E ++A + LGQG +G+VY+G VA+K + + E ++F E
Sbjct: 10 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 69
Query: 350 VEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTR---QAKP---PLDWN 403
++ +++RL G + L++ M G + LR R + P P +
Sbjct: 70 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 129
Query: 404 RRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV 463
+ + +A A G+ YL+ K +HRD+ A N ++ E F +GDFG+ RD +
Sbjct: 130 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT-----RDIYE 181
Query: 464 TTAVRG------TVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT--GQKALDVGNGQVQ 515
T R V ++PE L G + +DV+ FGV+L E+ T Q + N QV
Sbjct: 182 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV- 240
Query: 516 KGMILDCVRTLHEERRLDVLIDRDLKGSFDPTELEKMV-QLALQCTQSHPNLRP 568
+R + E LD P M+ +L C Q +P +RP
Sbjct: 241 -------LRFVMEGGLLD-----------KPDNCPDMLFELMRMCWQYNPKMRP 276
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 125/285 (43%), Gaps = 50/285 (17%)
Query: 311 LGQGGYG-VVYKGCL------PNRMV-VAVKRLK-DPNFTGEVQFQTEVEMIGL-ALHRN 360
LG+G +G VV + PNR+ VAVK LK D +E+EM+ + H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 361 LLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPP----------------LDWNR 404
++ L G C ++ Y G+ LR+ QA+ P L
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGN----LREYLQARRPPGLEYCYNPSHNPEEQLSSKD 151
Query: 405 RMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSH-V 463
+ A ARG+ YL + K IHRD+ A N+L+ E + DFGLA+ + D +
Sbjct: 152 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 464 TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCV 523
TT R V +APE L + ++DV+ FGVLL E+ T +G + +
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT------LGGSPYPGVPVEELF 262
Query: 524 RTLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRP 568
+ L E R+D K S EL M++ C + P+ RP
Sbjct: 263 KLLKEGHRMD-------KPSNCTNELYMMMR---DCWHAVPSQRP 297
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 129/275 (46%), Gaps = 39/275 (14%)
Query: 308 KNILGQGGYGVVYKGCLP----NRMVVAVKRLKDPNFTGEVQ--FQTEVEMIGLALHRNL 361
+ ++G G +G V G L + VA+K LK +T + + F +E ++G H N+
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLK-AGYTDKQRRDFLSEASIMGQFDHPNI 77
Query: 362 LRLYGFCMTPEERLLVYPYMPNGSVADCLR--DTRQAKPPLDWNRRMHIALGTARGLLYL 419
+ L G + +++ YM NGS+ LR D R L + + G G+ YL
Sbjct: 78 IHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQL-----VGMLRGIGSGMKYL 132
Query: 420 HEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGTVGHIAPE 477
+ +HRD+ A NIL++ + V DFG++++L D ++ T + + APE
Sbjct: 133 SDM---SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPE 189
Query: 478 YLSTGQSSEKTDVFGFGVLLLELIT-GQKAL-DVGNGQVQKGMILDCVRTLHEERRLDVL 535
++ + + +DV+ +G+++ E+++ G++ D+ N D ++ + E RL
Sbjct: 190 AIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ--------DVIKAIEEGYRLPPP 241
Query: 536 IDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKM 570
+D P L QL L C Q + RPK
Sbjct: 242 MD-------CPIALH---QLMLDCWQKERSDRPKF 266
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 123/281 (43%), Gaps = 42/281 (14%)
Query: 311 LGQGGYG-VVYKGCL------PNRMV-VAVKRLK-DPNFTGEVQFQTEVEMIGL-ALHRN 360
LG+G +G VV + PNR+ VAVK LK D +E+EM+ + H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 361 LLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRR------------MHI 408
++ L G C ++ Y G++ + L+ R +N +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 409 ALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRD-SHVTTAV 467
A ARG+ YL + K IHRD+ A N+L+ E + DFGLA+ + D TT
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNG 212
Query: 468 RGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLH 527
R V +APE L + ++DV+ FGVLL E+ T +G + + + L
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT------LGGSPYPGVPVEELFKLLK 266
Query: 528 EERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRP 568
E R+D K S EL M++ C + P+ RP
Sbjct: 267 EGHRMD-------KPSNCTNELYMMMR---DCWHAVPSQRP 297
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 125/294 (42%), Gaps = 49/294 (16%)
Query: 297 ELQIATGNFSPKNILGQGGYGVVYKGCLPN------RMVVAVKRLKDPNFTGE-VQFQTE 349
E ++A + LGQG +G+VY+G VA+K + + E ++F E
Sbjct: 41 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 100
Query: 350 VEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTR---QAKP---PLDWN 403
++ +++RL G + L++ M G + LR R + P P +
Sbjct: 101 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 160
Query: 404 RRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV 463
+ + +A A G+ YL+ K +HRD+ A N ++ E F +GDFG+ RD +
Sbjct: 161 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT-----RDIYE 212
Query: 464 TTAVRG------TVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT--GQKALDVGNGQVQ 515
T R V ++PE L G + +DV+ FGV+L E+ T Q + N QV
Sbjct: 213 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV- 271
Query: 516 KGMILDCVRTLHEERRLDVLIDRDLKGSFDPTELEKMV-QLALQCTQSHPNLRP 568
+R + E LD P M+ +L C Q +P +RP
Sbjct: 272 -------LRFVMEGGLLD-----------KPDNCPDMLFELMRMCWQYNPKMRP 307
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 125/294 (42%), Gaps = 49/294 (16%)
Query: 297 ELQIATGNFSPKNILGQGGYGVVYKGCLPN------RMVVAVKRLKDPNFTGE-VQFQTE 349
E ++A + LGQG +G+VY+G VA+K + + E ++F E
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 78
Query: 350 VEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTR---QAKP---PLDWN 403
++ +++RL G + L++ M G + LR R + P P +
Sbjct: 79 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 138
Query: 404 RRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV 463
+ + +A A G+ YL+ K +HRD+ A N ++ E F +GDFG+ RD +
Sbjct: 139 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT-----RDIYE 190
Query: 464 TTAVRG------TVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT--GQKALDVGNGQVQ 515
T R V ++PE L G + +DV+ FGV+L E+ T Q + N QV
Sbjct: 191 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV- 249
Query: 516 KGMILDCVRTLHEERRLDVLIDRDLKGSFDPTELEKMV-QLALQCTQSHPNLRP 568
+R + E LD P M+ +L C Q +P +RP
Sbjct: 250 -------LRFVMEGGLLD-----------KPDNCPDMLFELMRMCWQYNPKMRP 285
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 129/275 (46%), Gaps = 39/275 (14%)
Query: 308 KNILGQGGYGVVYKGCLP----NRMVVAVKRLKDPNFTGEVQ--FQTEVEMIGLALHRNL 361
+ ++G G +G V G L + VA+K LK +T + + F +E ++G H N+
Sbjct: 34 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLK-AGYTDKQRRDFLSEASIMGQFDHPNI 92
Query: 362 LRLYGFCMTPEERLLVYPYMPNGSVADCLR--DTRQAKPPLDWNRRMHIALGTARGLLYL 419
+ L G + +++ YM NGS+ LR D R L + + G G+ YL
Sbjct: 93 IHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQL-----VGMLRGIGSGMKYL 147
Query: 420 HEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGTVGHIAPE 477
+ +HRD+ A NIL++ + V DFG++++L D ++ T + + APE
Sbjct: 148 SDM---SAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPE 204
Query: 478 YLSTGQSSEKTDVFGFGVLLLELIT-GQKAL-DVGNGQVQKGMILDCVRTLHEERRLDVL 535
++ + + +DV+ +G+++ E+++ G++ D+ N D ++ + E RL
Sbjct: 205 AIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ--------DVIKAIEEGYRLPPP 256
Query: 536 IDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKM 570
+D P L QL L C Q + RPK
Sbjct: 257 MD-------CPIALH---QLMLDCWQKERSDRPKF 281
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 112/219 (51%), Gaps = 27/219 (12%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPN----RMVVAVKRLKD---PNFTGEVQFQTEVEMIGL 355
F +LG G +G VYKG +P ++ VA+K L++ P E+ E ++
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL--DEAYVMAS 74
Query: 356 ALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQ---AKPPLDWNRRMHIALGT 412
+ ++ RL G C+T +L++ MP G + D +R+ + ++ L+W +
Sbjct: 75 VDNPHVCRLLGICLTSTVQLIMQ-LMPFGXLLDYVREHKDNIGSQYLLNW------CVQI 127
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGT 470
A+G+ YL ++ +++HRD+ A N+L+ + DFGLAKLL + ++ H +
Sbjct: 128 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVP 183
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALD 508
+ +A E + + ++DV+ +GV + EL+T G K D
Sbjct: 184 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 125/290 (43%), Gaps = 41/290 (14%)
Query: 297 ELQIATGNFSPKNILGQGGYGVVYKGCLPN------RMVVAVKRLKDPNFTGE-VQFQTE 349
E ++A + LGQG +G+VY+G VA+K + + E ++F E
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 72
Query: 350 VEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTR---QAKP---PLDWN 403
++ +++RL G + L++ M G + LR R + P P +
Sbjct: 73 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 132
Query: 404 RRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV 463
+ + +A A G+ YL+ K +HRD+ A N ++ E F +GDFG+ + + D
Sbjct: 133 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXR 189
Query: 464 TTAVRG--TVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT--GQKALDVGNGQVQKGMI 519
+G V ++PE L G + +DV+ FGV+L E+ T Q + N QV
Sbjct: 190 KGG-KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV----- 243
Query: 520 LDCVRTLHEERRLDVLIDRDLKGSFDPTELEKMV-QLALQCTQSHPNLRP 568
+R + E LD P M+ +L C Q +P +RP
Sbjct: 244 ---LRFVMEGGLLD-----------KPDNCPDMLFELMRMCWQYNPKMRP 279
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 93/217 (42%), Gaps = 20/217 (9%)
Query: 299 QIATGNFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFTGE---VQFQTEVEMIG 354
+ +F LG+G +G VY N+ ++A+K L E Q + E+E+
Sbjct: 11 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 70
Query: 355 LALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTAR 414
H N+LR+Y + + L+ + P G + L Q D R A
Sbjct: 71 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL----QKHGRFDEQRSATFMEELAD 126
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGL---AKLLDRRDSHVTTAVRGTV 471
L Y HE+ K+IHRD+K N+L+ E + DFG A L RR + GT+
Sbjct: 127 ALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRR------XMCGTL 177
Query: 472 GHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALD 508
++ PE + EK D++ GVL E + G D
Sbjct: 178 DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 112/219 (51%), Gaps = 27/219 (12%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPN----RMVVAVKRLKD---PNFTGEVQFQTEVEMIGL 355
F +LG G +G VYKG +P ++ VA+K L++ P E+ E ++
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL--DEAYVMAS 76
Query: 356 ALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQ---AKPPLDWNRRMHIALGT 412
+ ++ RL G C+T +L++ MP G + D +R+ + ++ L+W +
Sbjct: 77 VDNPHVCRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQI 129
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGT 470
A+G+ YL ++ +++HRD+ A N+L+ + DFGLAKLL + ++ H +
Sbjct: 130 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVP 185
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALD 508
+ +A E + + ++DV+ +GV + EL+T G K D
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 112/219 (51%), Gaps = 27/219 (12%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPN----RMVVAVKRLKD---PNFTGEVQFQTEVEMIGL 355
F +LG G +G VYKG +P ++ VA+K L++ P E+ E ++
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL--DEAYVMAS 74
Query: 356 ALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQ---AKPPLDWNRRMHIALGT 412
+ ++ RL G C+T +L++ MP G + D +R+ + ++ L+W +
Sbjct: 75 VDNPHVCRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQI 127
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGT 470
A+G+ YL ++ +++HRD+ A N+L+ + DFGLAKLL + ++ H +
Sbjct: 128 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVP 183
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALD 508
+ +A E + + ++DV+ +GV + EL+T G K D
Sbjct: 184 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 97/223 (43%), Gaps = 44/223 (19%)
Query: 310 ILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTE--VEMIGLALHRNLLRLYGF 367
++G+G YG VYKG L R VAVK +F F E + + L H N+ R F
Sbjct: 20 LIGRGRYGAVYKGSLDER-PVAVKVF---SFANRQNFINEKNIYRVPLMEHDNIAR---F 72
Query: 368 CMTPE--------ERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYL 419
+ E E LLV Y PNGS+ L + DW +A RGL YL
Sbjct: 73 IVGDERVTADGRMEYLLVMEYYPNGSLXKYL-----SLHTSDWVSSCRLAHSVTRGLAYL 127
Query: 420 H------EQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLD--------RRDSHVTT 465
H + P I HRD+ + N+L+ V+ DFGL+ L D+ +
Sbjct: 128 HTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAIS 187
Query: 466 AVRGTVGHIAPEYLSTG-------QSSEKTDVFGFGVLLLELI 501
V GT+ ++APE L + ++ D++ G++ E+
Sbjct: 188 EV-GTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 112/219 (51%), Gaps = 27/219 (12%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPN----RMVVAVKRLKD---PNFTGEVQFQTEVEMIGL 355
F +LG G +G VYKG +P ++ VA+K L++ P E+ E ++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL--DEAYVMAS 73
Query: 356 ALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQ---AKPPLDWNRRMHIALGT 412
+ ++ RL G C+T +L++ MP G + D +R+ + ++ L+W +
Sbjct: 74 VDNPHVCRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQI 126
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGT 470
A+G+ YL ++ +++HRD+ A N+L+ + DFGLAKLL + ++ H +
Sbjct: 127 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVP 182
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALD 508
+ +A E + + ++DV+ +GV + EL+T G K D
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 112/219 (51%), Gaps = 27/219 (12%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPN----RMVVAVKRLKD---PNFTGEVQFQTEVEMIGL 355
F +LG G +G VYKG +P ++ VA+K L++ P E+ E ++
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL--DEAYVMAS 77
Query: 356 ALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQ---AKPPLDWNRRMHIALGT 412
+ ++ RL G C+T +L++ MP G + D +R+ + ++ L+W +
Sbjct: 78 VDNPHVCRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQI 130
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGT 470
A+G+ YL ++ +++HRD+ A N+L+ + DFGLAKLL + ++ H +
Sbjct: 131 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVP 186
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALD 508
+ +A E + + ++DV+ +GV + EL+T G K D
Sbjct: 187 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 111/219 (50%), Gaps = 27/219 (12%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPN----RMVVAVKRLKD---PNFTGEVQFQTEVEMIGL 355
F +LG G +G VYKG +P ++ VA+K L++ P E+ E ++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL--DEAYVMAS 73
Query: 356 ALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQ---AKPPLDWNRRMHIALGT 412
+ ++ RL G C+T +L+ MP G + D +R+ + ++ L+W +
Sbjct: 74 VDNPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQI 126
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGT 470
A+G+ YL ++ +++HRD+ A N+L+ + DFGLAKLL + ++ H +
Sbjct: 127 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVP 182
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALD 508
+ +A E + + ++DV+ +GV + EL+T G K D
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 93/217 (42%), Gaps = 20/217 (9%)
Query: 299 QIATGNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNFTGE---VQFQTEVEMIG 354
+ +F LG+G +G VY N+ ++A+K L E Q + E+E+
Sbjct: 10 KFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 69
Query: 355 LALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTAR 414
H N+LR+Y + + L+ + P G + L Q D R A
Sbjct: 70 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL----QKHGRFDEQRSATFMEELAD 125
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGL---AKLLDRRDSHVTTAVRGTV 471
L Y HE+ K+IHRD+K N+L+ E + DFG A L RR + GT+
Sbjct: 126 ALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRR------XMCGTL 176
Query: 472 GHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALD 508
++ PE + EK D++ GVL E + G D
Sbjct: 177 DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 112/219 (51%), Gaps = 27/219 (12%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPN----RMVVAVKRLKD---PNFTGEVQFQTEVEMIGL 355
F +LG G +G VYKG +P ++ VA+K L++ P E+ E ++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL--DEAYVMAS 75
Query: 356 ALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQ---AKPPLDWNRRMHIALGT 412
+ ++ RL G C+T +L++ MP G + D +R+ + ++ L+W +
Sbjct: 76 VDNPHVCRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQI 128
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGT 470
A+G+ YL ++ +++HRD+ A N+L+ + DFGLAKLL + ++ H +
Sbjct: 129 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVP 184
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALD 508
+ +A E + + ++DV+ +GV + EL+T G K D
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 110/213 (51%), Gaps = 25/213 (11%)
Query: 309 NILGQGGYGVVYKGC-LPN----RMVVAVKRLKD---PNFTGEVQFQTEVEMIGLALHRN 360
+LG G +G VYKG +P+ ++ VA+K L++ P E+ + V M G+
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYV-MAGVG-SPY 80
Query: 361 LLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQ---AKPPLDWNRRMHIALGTARGLL 417
+ RL G C+T +L V MP G + D +R+ R ++ L+W + A+G+
Sbjct: 81 VSRLLGICLTSTVQL-VTQLMPYGCLLDHVRENRGRLGSQDLLNW------CMQIAKGMS 133
Query: 418 YLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV-TTAVRGTVGHIAP 476
YL + +++HRD+ A N+L+ + DFGLA+LLD ++ + + +A
Sbjct: 134 YLEDV---RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMAL 190
Query: 477 EYLSTGQSSEKTDVFGFGVLLLELIT-GQKALD 508
E + + + ++DV+ +GV + EL+T G K D
Sbjct: 191 ESILRRRFTHQSDVWSYGVTVWELMTFGAKPYD 223
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 111/219 (50%), Gaps = 27/219 (12%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPN----RMVVAVKRLKD---PNFTGEVQFQTEVEMIGL 355
F +LG G +G VYKG +P ++ VA+K L++ P E+ E ++
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL--DEAYVMAS 67
Query: 356 ALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQ---AKPPLDWNRRMHIALGT 412
+ ++ RL G C+T +L+ MP G + D +R+ + ++ L+W +
Sbjct: 68 VDNPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQI 120
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGT 470
A+G+ YL ++ +++HRD+ A N+L+ + DFGLAKLL + ++ H +
Sbjct: 121 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVP 176
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALD 508
+ +A E + + ++DV+ +GV + EL+T G K D
Sbjct: 177 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 215
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 93/217 (42%), Gaps = 20/217 (9%)
Query: 299 QIATGNFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFTGE---VQFQTEVEMIG 354
+ +F LG+G +G VY N+ ++A+K L E Q + E+E+
Sbjct: 10 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 69
Query: 355 LALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTAR 414
H N+LR+Y + + L+ + P G + L Q D R A
Sbjct: 70 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL----QKHGRFDEQRSATFMEELAD 125
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGL---AKLLDRRDSHVTTAVRGTV 471
L Y HE+ K+IHRD+K N+L+ E + DFG A L RR + GT+
Sbjct: 126 ALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRR------XMCGTL 176
Query: 472 GHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALD 508
++ PE + EK D++ GVL E + G D
Sbjct: 177 DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 111/219 (50%), Gaps = 27/219 (12%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPN----RMVVAVKRLKD---PNFTGEVQFQTEVEMIGL 355
F +LG G +G VYKG +P ++ VA+K L++ P E+ E ++
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL--DEAYVMAS 79
Query: 356 ALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQ---AKPPLDWNRRMHIALGT 412
+ ++ RL G C+T +L+ MP G + D +R+ + ++ L+W +
Sbjct: 80 VDNPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQI 132
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGT 470
A+G+ YL ++ +++HRD+ A N+L+ + DFGLAKLL + ++ H +
Sbjct: 133 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVP 188
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALD 508
+ +A E + + ++DV+ +GV + EL+T G K D
Sbjct: 189 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 227
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 111/219 (50%), Gaps = 27/219 (12%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPN----RMVVAVKRLKD---PNFTGEVQFQTEVEMIGL 355
F +LG G +G VYKG +P ++ VA+K L++ P E+ E ++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL--DEAYVMAS 73
Query: 356 ALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQ---AKPPLDWNRRMHIALGT 412
+ ++ RL G C+T +L+ MP G + D +R+ + ++ L+W +
Sbjct: 74 VDNPHVCRLLGICLTSTVQLITQ-LMPFGXLLDYVREHKDNIGSQYLLNW------CVQI 126
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGT 470
A+G+ YL ++ +++HRD+ A N+L+ + DFGLAKLL + ++ H +
Sbjct: 127 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVP 182
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALD 508
+ +A E + + ++DV+ +GV + EL+T G K D
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 107/235 (45%), Gaps = 49/235 (20%)
Query: 302 TGNFSPKNILGQGGYGVVYKG--CLPNRMVVAVKRLKDPNFTGEVQFQT---EVEMIGLA 356
+F +LGQG +G V K L +R A+K+++ E + T EV ++
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYY-AIKKIRHT----EEKLSTILSEVMLLASL 59
Query: 357 LHRNLLRLYGFCMTPEERLLVYP---------------YMPNGSVADCLRDTRQAKPPLD 401
H+ ++R Y + E R V P Y NG++ D + + +
Sbjct: 60 NHQYVVRYYAAWL--ERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDE 117
Query: 402 WNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRR-- 459
+ R L L Y+H Q IIHRD+K NI +DES +GDFGLAK + R
Sbjct: 118 YWRLFRQIL---EALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLD 171
Query: 460 ----DS--------HVTTAVRGTVGHIAPEYLS-TGQSSEKTDVFGFGVLLLELI 501
DS ++T+A+ GT ++A E L TG +EK D++ G++ E+I
Sbjct: 172 ILKLDSQNLPGSSDNLTSAI-GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 111/219 (50%), Gaps = 27/219 (12%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPN----RMVVAVKRLKD---PNFTGEVQFQTEVEMIGL 355
F +LG G +G VYKG +P ++ VA+K L++ P E+ E ++
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL--DEAYVMAS 83
Query: 356 ALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQ---AKPPLDWNRRMHIALGT 412
+ ++ RL G C+T +L+ MP G + D +R+ + ++ L+W +
Sbjct: 84 VDNPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQI 136
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGT 470
A+G+ YL ++ +++HRD+ A N+L+ + DFGLAKLL + ++ H +
Sbjct: 137 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVP 192
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALD 508
+ +A E + + ++DV+ +GV + EL+T G K D
Sbjct: 193 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 231
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 125/290 (43%), Gaps = 41/290 (14%)
Query: 297 ELQIATGNFSPKNILGQGGYGVVYKGCLPN------RMVVAVKRLKDPNFTGE-VQFQTE 349
E ++A + LGQG +G+VY+G VA+K + + E ++F E
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 63
Query: 350 VEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTR---QAKP---PLDWN 403
++ +++RL G + L++ M G + LR R + P P +
Sbjct: 64 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 123
Query: 404 RRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV 463
+ + +A A G+ YL+ K +HRD+ A N ++ E F +GDFG+ + + D
Sbjct: 124 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXR 180
Query: 464 TTAVRG--TVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT--GQKALDVGNGQVQKGMI 519
+G V ++PE L G + +DV+ FGV+L E+ T Q + N QV
Sbjct: 181 KGG-KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV----- 234
Query: 520 LDCVRTLHEERRLDVLIDRDLKGSFDPTELEKM-VQLALQCTQSHPNLRP 568
+R + E LD P M ++L C Q +P +RP
Sbjct: 235 ---LRFVMEGGLLD-----------KPDNCPDMLLELMRMCWQYNPKMRP 270
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 111/219 (50%), Gaps = 27/219 (12%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPN----RMVVAVKRLKD---PNFTGEVQFQTEVEMIGL 355
F +LG G +G VYKG +P ++ VA+K L++ P E+ E ++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL--DEAYVMAS 73
Query: 356 ALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQ---AKPPLDWNRRMHIALGT 412
+ ++ RL G C+T +L+ MP G + D +R+ + ++ L+W +
Sbjct: 74 VDNPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQI 126
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGT 470
A+G+ YL ++ +++HRD+ A N+L+ + DFGLAKLL + ++ H +
Sbjct: 127 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVP 182
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALD 508
+ +A E + + ++DV+ +GV + EL+T G K D
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 111/219 (50%), Gaps = 27/219 (12%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPN----RMVVAVKRLKD---PNFTGEVQFQTEVEMIGL 355
F +LG G +G VYKG +P ++ VA+K L++ P E+ E ++
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL--DEAYVMAS 98
Query: 356 ALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQ---AKPPLDWNRRMHIALGT 412
+ ++ RL G C+T +L+ MP G + D +R+ + ++ L+W +
Sbjct: 99 VDNPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQI 151
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGT 470
A+G+ YL ++ +++HRD+ A N+L+ + DFGLAKLL + ++ H +
Sbjct: 152 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVP 207
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALD 508
+ +A E + + ++DV+ +GV + EL+T G K D
Sbjct: 208 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 246
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 111/219 (50%), Gaps = 27/219 (12%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPN----RMVVAVKRLKD---PNFTGEVQFQTEVEMIGL 355
F +LG G +G VYKG +P ++ VA+K L++ P E+ E ++
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL--DEAYVMAS 76
Query: 356 ALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQ---AKPPLDWNRRMHIALGT 412
+ ++ RL G C+T +L+ MP G + D +R+ + ++ L+W +
Sbjct: 77 VDNPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQI 129
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGT 470
A+G+ YL ++ +++HRD+ A N+L+ + DFGLAKLL + ++ H +
Sbjct: 130 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVP 185
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALD 508
+ +A E + + ++DV+ +GV + EL+T G K D
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 111/219 (50%), Gaps = 27/219 (12%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPN----RMVVAVKRLKD---PNFTGEVQFQTEVEMIGL 355
F +LG G +G VYKG +P ++ VA+K L++ P E+ E ++
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL--DEAYVMAS 80
Query: 356 ALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQ---AKPPLDWNRRMHIALGT 412
+ ++ RL G C+T +L+ MP G + D +R+ + ++ L+W +
Sbjct: 81 VDNPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQI 133
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGT 470
A+G+ YL ++ +++HRD+ A N+L+ + DFGLAKLL + ++ H +
Sbjct: 134 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVP 189
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALD 508
+ +A E + + ++DV+ +GV + EL+T G K D
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 111/219 (50%), Gaps = 27/219 (12%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPN----RMVVAVKRLKD---PNFTGEVQFQTEVEMIGL 355
F +LG G +G VYKG +P ++ VA+K L++ P E+ E ++
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL--DEAYVMAS 76
Query: 356 ALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQ---AKPPLDWNRRMHIALGT 412
+ ++ RL G C+T +L+ MP G + D +R+ + ++ L+W +
Sbjct: 77 VDNPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQI 129
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGT 470
A+G+ YL ++ +++HRD+ A N+L+ + DFGLAKLL + ++ H +
Sbjct: 130 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVP 185
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALD 508
+ +A E + + ++DV+ +GV + EL+T G K D
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 111/219 (50%), Gaps = 27/219 (12%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPN----RMVVAVKRLKD---PNFTGEVQFQTEVEMIGL 355
F +LG G +G VYKG +P ++ VA+K L++ P E+ E ++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL--DEAYVMAS 75
Query: 356 ALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQ---AKPPLDWNRRMHIALGT 412
+ ++ RL G C+T +L+ MP G + D +R+ + ++ L+W +
Sbjct: 76 VDNPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQI 128
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGT 470
A+G+ YL ++ +++HRD+ A N+L+ + DFGLAKLL + ++ H +
Sbjct: 129 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVP 184
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALD 508
+ +A E + + ++DV+ +GV + EL+T G K D
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 124/294 (42%), Gaps = 49/294 (16%)
Query: 297 ELQIATGNFSPKNILGQGGYGVVYKGCLPN------RMVVAVKRLKDPNFTGE-VQFQTE 349
E ++A + LGQG +G+VY+G VA+K + + E ++F E
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 350 VEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTR---QAKP---PLDWN 403
++ +++RL G + L++ M G + LR R + P P +
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 125
Query: 404 RRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV 463
+ + +A A G+ YL+ K +HRD+ A N + E F +GDFG+ RD +
Sbjct: 126 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMT-----RDIYE 177
Query: 464 TTAVRG------TVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT--GQKALDVGNGQVQ 515
T R V ++PE L G + +DV+ FGV+L E+ T Q + N QV
Sbjct: 178 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV- 236
Query: 516 KGMILDCVRTLHEERRLDVLIDRDLKGSFDPTELEKM-VQLALQCTQSHPNLRP 568
+R + E LD P M ++L C Q +P +RP
Sbjct: 237 -------LRFVMEGGLLD-----------KPDNCPDMLLELMRMCWQYNPKMRP 272
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 100/207 (48%), Gaps = 18/207 (8%)
Query: 311 LGQGGYGVVYK------GCLPNRMVVAVKRLKDPNFTGEVQ-FQTEVEMIG-LALHRNLL 362
LG G +G V + G + VAVK LK E + +E++++ L H N++
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 105
Query: 363 RLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAK------PPLDWNRRMHIALGTARGL 416
L G C L++ Y G + + LR +A PL+ +H + A+G+
Sbjct: 106 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGM 165
Query: 417 LYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAK-LLDRRDSHVTTAVRGTVGHIA 475
+L + IHRDV A N+LL A +GDFGLA+ +++ + V R V +A
Sbjct: 166 AFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMA 222
Query: 476 PEYLSTGQSSEKTDVFGFGVLLLELIT 502
PE + + ++DV+ +G+LL E+ +
Sbjct: 223 PESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 111/219 (50%), Gaps = 27/219 (12%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPN----RMVVAVKRLKD---PNFTGEVQFQTEVEMIGL 355
F +LG G +G VYKG +P ++ VA+K L++ P E+ E ++
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL--DEAYVMAS 76
Query: 356 ALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQ---AKPPLDWNRRMHIALGT 412
+ ++ RL G C+T +L+ MP G + D +R+ + ++ L+W +
Sbjct: 77 VDNPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQI 129
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGT 470
A+G+ YL ++ +++HRD+ A N+L+ + DFGLAKLL + ++ H +
Sbjct: 130 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVP 185
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALD 508
+ +A E + + ++DV+ +GV + EL+T G K D
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 106/223 (47%), Gaps = 16/223 (7%)
Query: 287 VGHLKRFSFRELQIATGN-FSPKNILGQGGYGVVYKGCLPN-RMVVAVKRLK-DPNFTGE 343
+ HL+ F+ + ++ F+ + +G+G +G VYKG + + VVA+K + +
Sbjct: 2 MAHLRGFANQHSRVDPEELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEI 61
Query: 344 VQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKP-PLDW 402
Q E+ ++ + R +G + + ++ Y+ GS D L KP PL+
Sbjct: 62 EDIQQEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLL------KPGPLEE 115
Query: 403 NRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSH 462
I +GL YLH + + IHRD+KAAN+LL E + + DFG+A L D+
Sbjct: 116 TYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLT--DTQ 170
Query: 463 VT-TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQ 504
+ GT +APE + K D++ G+ +EL G+
Sbjct: 171 IKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGE 213
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 100/207 (48%), Gaps = 18/207 (8%)
Query: 311 LGQGGYGVVYK------GCLPNRMVVAVKRLKDPNFTGEVQ-FQTEVEMIG-LALHRNLL 362
LG G +G V + G + VAVK LK E + +E++++ L H N++
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 363 RLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAK------PPLDWNRRMHIALGTARGL 416
L G C L++ Y G + + LR +A PL+ +H + A+G+
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGM 173
Query: 417 LYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAK-LLDRRDSHVTTAVRGTVGHIA 475
+L + IHRDV A N+LL A +GDFGLA+ +++ + V R V +A
Sbjct: 174 AFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMA 230
Query: 476 PEYLSTGQSSEKTDVFGFGVLLLELIT 502
PE + + ++DV+ +G+LL E+ +
Sbjct: 231 PESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 110/219 (50%), Gaps = 27/219 (12%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPN----RMVVAVKRLKD---PNFTGEVQFQTEVEMIGL 355
F +LG G +G VYKG +P ++ VA+K L++ P E+ E ++
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL--DEAYVMAS 70
Query: 356 ALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQ---AKPPLDWNRRMHIALGT 412
+ ++ RL G C+T +L+ MP G + D +R+ + ++ L+W +
Sbjct: 71 VDNPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQI 123
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGT 470
A G+ YL ++ +++HRD+ A N+L+ + DFGLAKLL + ++ H +
Sbjct: 124 AEGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVP 179
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALD 508
+ +A E + + ++DV+ +GV + EL+T G K D
Sbjct: 180 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 218
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 99/206 (48%), Gaps = 19/206 (9%)
Query: 310 ILGQGGYGVVYKG-CLPNRMVVAVKRLK-----DPNFTGEVQFQTEVEMIGLALHRNLLR 363
ILG GG V+ L + VAVK L+ DP+F ++F+ E + H ++
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFY--LRFRREAQNAAALNHPAIVA 76
Query: 364 LY--GFCMTPEERLLVYPYMPNGSVADC-LRDTRQAKPPLDWNRRMHIALGTARGLLYLH 420
+Y G TP L PY+ V LRD + P+ R + + + L + H
Sbjct: 77 VYDTGEAETPAGPL---PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSH 133
Query: 421 EQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV--TTAVRGTVGHIAPEY 478
+ IIHRDVK ANIL+ + V DFG+A+ + + V T AV GT +++PE
Sbjct: 134 QNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQ 190
Query: 479 LSTGQSSEKTDVFGFGVLLLELITGQ 504
++DV+ G +L E++TG+
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 100/233 (42%), Gaps = 15/233 (6%)
Query: 300 IATGNFSPKNILGQGGYGVVYKGCLPNR-MVVAVKRLKDPNFTGEVQFQTEVEMIGLAL- 357
+AT + P +G G YG VYK P+ VA+K ++ PN + T E+ L
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 358 ----HRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPP--LDWNRRMHIALG 411
H N++RL C T + + V LR PP L +
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 412 TARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTV 471
RGL +LH C I+HRD+K NIL+ + DFGLA++ + + V T+
Sbjct: 121 FLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVV--TL 175
Query: 472 GHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQV-QKGMILDCV 523
+ APE L + D++ G + E+ +K L GN + Q G I D +
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNSEADQLGKIFDLI 227
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 100/233 (42%), Gaps = 15/233 (6%)
Query: 300 IATGNFSPKNILGQGGYGVVYKGCLPNR-MVVAVKRLKDPNFTGEVQFQTEVEMIGLAL- 357
+AT + P +G G YG VYK P+ VA+K ++ PN + T E+ L
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 358 ----HRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPP--LDWNRRMHIALG 411
H N++RL C T + + V LR PP L +
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 412 TARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTV 471
RGL +LH C I+HRD+K NIL+ + DFGLA++ + + V T+
Sbjct: 121 FLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV--TL 175
Query: 472 GHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQV-QKGMILDCV 523
+ APE L + D++ G + E+ +K L GN + Q G I D +
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNSEADQLGKIFDLI 227
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 107/227 (47%), Gaps = 27/227 (11%)
Query: 311 LGQGGYGVVYKGCL-PNRMVVAVKRLKD---PNFTGEVQFQTEVEMIGLALHRNLLRLYG 366
+G+G +G V+ G L + +VAVK ++ P+ + +F E ++ H N++RL G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDL--KAKFLQEARILKQYSHPNIVRLIG 179
Query: 367 FCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPK 426
C + +V + G LR T A+ L + + A G+ YL +C
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLR-TEGAR--LRVKTLLQMVGDAAAGMEYLESKC--- 233
Query: 427 IIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHI-----APEYLST 481
IHRD+ A N L+ E + DFG++ R ++ A G + + APE L+
Sbjct: 234 CIHRDLAARNCLVTEKNVLKISDFGMS----REEADGVXAASGGLRQVPVKWTAPEALNY 289
Query: 482 GQSSEKTDVFGFGVLLLELIT--GQKALDVGNGQ----VQKGMILDC 522
G+ S ++DV+ FG+LL E + ++ N Q V+KG L C
Sbjct: 290 GRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPC 336
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 96/206 (46%), Gaps = 26/206 (12%)
Query: 311 LGQGGYGVVYKGCL-PNR----MVVAVKRLKD---PNFTGEVQFQTEVEMIGLALHRNLL 362
LG+G +G V C P +VAVK LK+ P +Q E+E++ H +++
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRS--GWQREIEILRTLYHEHIV 74
Query: 363 RLYGFCMTPEER--LLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLH 420
+ G C E+ LV Y+P GS+ D L + + + + A G+ YLH
Sbjct: 75 KYKGCCEDQGEKSVQLVMEYVPLGSLRDYL-----PRHCVGLAQLLLFAQQICEGMAYLH 129
Query: 421 EQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVR----GTVGHIAP 476
Q IHR + A N+LLD +GDFGLAK + + H VR V AP
Sbjct: 130 AQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVP--EGHEYYRVREDGDSPVFWYAP 184
Query: 477 EYLSTGQSSEKTDVFGFGVLLLELIT 502
E L + +DV+ FGV L EL+T
Sbjct: 185 ECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 58/92 (63%)
Query: 87 VVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLV 146
+VSL ++ LSGT+ S+G+L+ LR + L N L G IP E + L+TL L N L
Sbjct: 420 LVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLT 479
Query: 147 GEIPSSLGFLTHLTYLRLNNNKLSGQIPTLVA 178
GEIPS L T+L ++ L+NN+L+G+IP +
Sbjct: 480 GEIPSGLSNCTNLNWISLSNNRLTGEIPKWIG 511
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 58/93 (62%)
Query: 84 EGFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNN 143
G ++ L+M+ LSG + IG++ +L + L +N +SG IP E G L L LDLS+N
Sbjct: 631 NGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSN 690
Query: 144 QLVGEIPSSLGFLTHLTYLRLNNNKLSGQIPTL 176
+L G IP ++ LT LT + L+NN LSG IP +
Sbjct: 691 KLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM 723
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 43/78 (55%)
Query: 97 LSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFL 156
L+G + + N T+L + L NN+L+G IP G L L L LSNN G IP+ LG
Sbjct: 478 LTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDC 537
Query: 157 THLTYLRLNNNKLSGQIP 174
L +L LN N +G IP
Sbjct: 538 RSLIWLDLNTNLFNGTIP 555
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 51/86 (59%)
Query: 90 LEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEI 149
L + + G +G + P++ N + L ++ L N LSG IP G LS+L+ L L N L GEI
Sbjct: 399 LYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEI 458
Query: 150 PSSLGFLTHLTYLRLNNNKLSGQIPT 175
P L ++ L L L+ N L+G+IP+
Sbjct: 459 PQELMYVKTLETLILDFNDLTGEIPS 484
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 87 VVSLEMASMGLSGTLSPSI--GNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQ 144
+++L+++S SG + P++ L+ + L NN +G IP SEL +L LS N
Sbjct: 370 LLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNY 429
Query: 145 LVGEIPSSLGFLTHLTYLRLNNNKLSGQIP 174
L G IPSSLG L+ L L+L N L G+IP
Sbjct: 430 LSGTIPSSLGSLSKLRDLKLWLNMLEGEIP 459
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 49/102 (48%)
Query: 99 GTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTH 158
G SP+ N + + + N LSG IP E G + L L+L +N + G IP +G L
Sbjct: 622 GHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRG 681
Query: 159 LTYLRLNNNKLSGQIPTLVAXXXXXXXXXXXXXXXXGPTPKV 200
L L L++NKL G+IP ++ GP P++
Sbjct: 682 LNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM 723
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 103 PSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYL 162
P +G+ + L+ + + N+LSG +EL+ L++S+NQ VG IP L L YL
Sbjct: 217 PFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLP--LKSLQYL 274
Query: 163 RLNNNKLSGQIPTLVA 178
L NK +G+IP ++
Sbjct: 275 SLAENKFTGEIPDFLS 290
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%)
Query: 86 FVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQL 145
++ L + +SG++ +G+L L + L +N+L G IP L+ L +DLSNN L
Sbjct: 657 YLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNL 716
Query: 146 VGEIPSSLGFLTHLTYLRLNNNKLSG 171
G IP F T LNN L G
Sbjct: 717 SGPIPEMGQFETFPPAKFLNNPGLCG 742
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 90 LEMASMGLSGTLSPSIGNLT-HLRTMLLHNNQLSGPIPVEF--GMLSELQTLDLSNNQLV 146
L+++ SG L S+ NL+ L T+ L +N SGPI + LQ L L NN
Sbjct: 348 LDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFT 407
Query: 147 GEIPSSLGFLTHLTYLRLNNNKLSGQIPT 175
G+IP +L + L L L+ N LSG IP+
Sbjct: 408 GKIPPTLSNCSELVSLHLSFNYLSGTIPS 436
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 90 LEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEI 149
+ +++ L+G + IG L +L + L NN SG IP E G L LDL+ N G I
Sbjct: 495 ISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTI 554
Query: 150 PSSL 153
P+++
Sbjct: 555 PAAM 558
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 26/117 (22%)
Query: 81 CSAEGFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIP------VEFGMLSE 134
CSA + L+++ LSG S +I T L+ + + +NQ GPIP +++ L+E
Sbjct: 222 CSA---LQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAE 278
Query: 135 -----------------LQTLDLSNNQLVGEIPSSLGFLTHLTYLRLNNNKLSGQIP 174
L LDLS N G +P G + L L L++N SG++P
Sbjct: 279 NKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELP 335
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 110 HLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRLNNNKL 169
+L + + +N S IP G S LQ LD+S N+L G+ ++ T L L +++N+
Sbjct: 201 NLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQF 259
Query: 170 SGQIPTL 176
G IP L
Sbjct: 260 VGPIPPL 266
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 87 VVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGM-LSELQTLDLSNNQL 145
+ L+++ G + P G+ + L ++ L +N SG +P++ + + L+ LDLS N+
Sbjct: 296 LTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEF 355
Query: 146 VGEIPSSLGFLT-HLTYLRLNNNKLSGQI 173
GE+P SL L+ L L L++N SG I
Sbjct: 356 SGELPESLTNLSASLLTLDLSSNNFSGPI 384
Score = 32.3 bits (72), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 57/101 (56%), Gaps = 12/101 (11%)
Query: 81 CSAEGFVVSLEMASMGLSGTLSP--SIGNLTHLRTMLLHNNQLSGPIPVEFGM-LSELQT 137
CSA + SL+++ LSG ++ S+G+ + L+ + + +N L P V G+ L+ L+
Sbjct: 98 CSAS--LTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEV 155
Query: 138 LDLSNNQLVGEIPSSLGFLT-----HLTYLRLNNNKLSGQI 173
LDLS N + G + +G++ L +L ++ NK+SG +
Sbjct: 156 LDLSANSISGA--NVVGWVLSDGCGELKHLAISGNKISGDV 194
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 58/92 (63%)
Query: 87 VVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLV 146
+VSL ++ LSGT+ S+G+L+ LR + L N L G IP E + L+TL L N L
Sbjct: 417 LVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLT 476
Query: 147 GEIPSSLGFLTHLTYLRLNNNKLSGQIPTLVA 178
GEIPS L T+L ++ L+NN+L+G+IP +
Sbjct: 477 GEIPSGLSNCTNLNWISLSNNRLTGEIPKWIG 508
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 58/93 (62%)
Query: 84 EGFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNN 143
G ++ L+M+ LSG + IG++ +L + L +N +SG IP E G L L LDLS+N
Sbjct: 628 NGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSN 687
Query: 144 QLVGEIPSSLGFLTHLTYLRLNNNKLSGQIPTL 176
+L G IP ++ LT LT + L+NN LSG IP +
Sbjct: 688 KLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM 720
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 43/78 (55%)
Query: 97 LSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFL 156
L+G + + N T+L + L NN+L+G IP G L L L LSNN G IP+ LG
Sbjct: 475 LTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDC 534
Query: 157 THLTYLRLNNNKLSGQIP 174
L +L LN N +G IP
Sbjct: 535 RSLIWLDLNTNLFNGTIP 552
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 51/86 (59%)
Query: 90 LEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEI 149
L + + G +G + P++ N + L ++ L N LSG IP G LS+L+ L L N L GEI
Sbjct: 396 LYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEI 455
Query: 150 PSSLGFLTHLTYLRLNNNKLSGQIPT 175
P L ++ L L L+ N L+G+IP+
Sbjct: 456 PQELMYVKTLETLILDFNDLTGEIPS 481
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 87 VVSLEMASMGLSGTLSPSI--GNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQ 144
+++L+++S SG + P++ L+ + L NN +G IP SEL +L LS N
Sbjct: 367 LLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNY 426
Query: 145 LVGEIPSSLGFLTHLTYLRLNNNKLSGQIP 174
L G IPSSLG L+ L L+L N L G+IP
Sbjct: 427 LSGTIPSSLGSLSKLRDLKLWLNMLEGEIP 456
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 49/102 (48%)
Query: 99 GTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTH 158
G SP+ N + + + N LSG IP E G + L L+L +N + G IP +G L
Sbjct: 619 GHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRG 678
Query: 159 LTYLRLNNNKLSGQIPTLVAXXXXXXXXXXXXXXXXGPTPKV 200
L L L++NKL G+IP ++ GP P++
Sbjct: 679 LNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM 720
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 103 PSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYL 162
P +G+ + L+ + + N+LSG +EL+ L++S+NQ VG IP L L YL
Sbjct: 214 PFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLP--LKSLQYL 271
Query: 163 RLNNNKLSGQIPTLVA 178
L NK +G+IP ++
Sbjct: 272 SLAENKFTGEIPDFLS 287
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%)
Query: 86 FVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQL 145
++ L + +SG++ +G+L L + L +N+L G IP L+ L +DLSNN L
Sbjct: 654 YLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNL 713
Query: 146 VGEIPSSLGFLTHLTYLRLNNNKLSG 171
G IP F T LNN L G
Sbjct: 714 SGPIPEMGQFETFPPAKFLNNPGLCG 739
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 90 LEMASMGLSGTLSPSIGNLT-HLRTMLLHNNQLSGPIPVEF--GMLSELQTLDLSNNQLV 146
L+++ SG L S+ NL+ L T+ L +N SGPI + LQ L L NN
Sbjct: 345 LDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFT 404
Query: 147 GEIPSSLGFLTHLTYLRLNNNKLSGQIPT 175
G+IP +L + L L L+ N LSG IP+
Sbjct: 405 GKIPPTLSNCSELVSLHLSFNYLSGTIPS 433
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 90 LEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEI 149
+ +++ L+G + IG L +L + L NN SG IP E G L LDL+ N G I
Sbjct: 492 ISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTI 551
Query: 150 PSSL 153
P+++
Sbjct: 552 PAAM 555
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 26/117 (22%)
Query: 81 CSAEGFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIP------VEFGMLSE 134
CSA + L+++ LSG S +I T L+ + + +NQ GPIP +++ L+E
Sbjct: 219 CSA---LQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAE 275
Query: 135 -----------------LQTLDLSNNQLVGEIPSSLGFLTHLTYLRLNNNKLSGQIP 174
L LDLS N G +P G + L L L++N SG++P
Sbjct: 276 NKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELP 332
Score = 35.8 bits (81), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 110 HLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRLNNNKL 169
+L + + +N S IP G S LQ LD+S N+L G+ ++ T L L +++N+
Sbjct: 198 NLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQF 256
Query: 170 SGQIPTL 176
G IP L
Sbjct: 257 VGPIPPL 263
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 87 VVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGM-LSELQTLDLSNNQL 145
+ L+++ G + P G+ + L ++ L +N SG +P++ + + L+ LDLS N+
Sbjct: 293 LTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEF 352
Query: 146 VGEIPSSLGFLT-HLTYLRLNNNKLSGQI 173
GE+P SL L+ L L L++N SG I
Sbjct: 353 SGELPESLTNLSASLLTLDLSSNNFSGPI 381
Score = 32.3 bits (72), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 57/101 (56%), Gaps = 12/101 (11%)
Query: 81 CSAEGFVVSLEMASMGLSGTLSP--SIGNLTHLRTMLLHNNQLSGPIPVEFGM-LSELQT 137
CSA + SL+++ LSG ++ S+G+ + L+ + + +N L P V G+ L+ L+
Sbjct: 95 CSAS--LTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEV 152
Query: 138 LDLSNNQLVGEIPSSLGFLT-----HLTYLRLNNNKLSGQI 173
LDLS N + G + +G++ L +L ++ NK+SG +
Sbjct: 153 LDLSANSISGA--NVVGWVLSDGCGELKHLAISGNKISGDV 191
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 96/206 (46%), Gaps = 26/206 (12%)
Query: 311 LGQGGYGVVYKGCL-PNR----MVVAVKRLKD---PNFTGEVQFQTEVEMIGLALHRNLL 362
LG+G +G V C P +VAVK LK+ P +Q E+E++ H +++
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRS--GWQREIEILRTLYHEHIV 73
Query: 363 RLYGFCMTPEER--LLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLH 420
+ G C E+ LV Y+P GS+ D L + + + + A G+ YLH
Sbjct: 74 KYKGCCEDQGEKSVQLVMEYVPLGSLRDYL-----PRHCVGLAQLLLFAQQICEGMAYLH 128
Query: 421 EQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVR----GTVGHIAP 476
Q IHR + A N+LLD +GDFGLAK + + H VR V AP
Sbjct: 129 AQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVP--EGHEYYRVREDGDSPVFWYAP 183
Query: 477 EYLSTGQSSEKTDVFGFGVLLLELIT 502
E L + +DV+ FGV L EL+T
Sbjct: 184 ECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 96/204 (47%), Gaps = 22/204 (10%)
Query: 311 LGQGGYGVVYKGCL-PNR----MVVAVKRLK-DPNFTGEVQFQTEVEMIGLALHRNLLRL 364
LG+G +G V C P +VAVK LK D ++ E++++ H ++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 365 YGFCMTPEER--LLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQ 422
G C E+ LV Y+P GS+ D L + + + + A G+ YLH Q
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL-----PRHSIGLAQLLLFAQQICEGMAYLHSQ 136
Query: 423 CNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVR----GTVGHIAPEY 478
IHR++ A N+LLD +GDFGLAK + + H VR V APE
Sbjct: 137 ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVP--EGHEYYRVREDGDSPVFWYAPEC 191
Query: 479 LSTGQSSEKTDVFGFGVLLLELIT 502
L + +DV+ FGV L EL+T
Sbjct: 192 LKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 99/206 (48%), Gaps = 19/206 (9%)
Query: 310 ILGQGGYGVVYKG-CLPNRMVVAVKRLK-----DPNFTGEVQFQTEVEMIGLALHRNLLR 363
ILG GG V+ L + VAVK L+ DP+F ++F+ E + H ++
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFY--LRFRREAQNAAALNHPAIVA 76
Query: 364 LY--GFCMTPEERLLVYPYMPNGSVADC-LRDTRQAKPPLDWNRRMHIALGTARGLLYLH 420
+Y G TP L PY+ V LRD + P+ R + + + L + H
Sbjct: 77 VYDTGEAETPAGPL---PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSH 133
Query: 421 EQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV--TTAVRGTVGHIAPEY 478
+ IIHRDVK ANI++ + V DFG+A+ + + V T AV GT +++PE
Sbjct: 134 QNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 479 LSTGQSSEKTDVFGFGVLLLELITGQ 504
++DV+ G +L E++TG+
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 99/206 (48%), Gaps = 19/206 (9%)
Query: 310 ILGQGGYGVVYKG-CLPNRMVVAVKRLK-----DPNFTGEVQFQTEVEMIGLALHRNLLR 363
ILG GG V+ L + VAVK L+ DP+F ++F+ E + H ++
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFY--LRFRREAQNAAALNHPAIVA 76
Query: 364 LY--GFCMTPEERLLVYPYMPNGSVADC-LRDTRQAKPPLDWNRRMHIALGTARGLLYLH 420
+Y G TP L PY+ V LRD + P+ R + + + L + H
Sbjct: 77 VYDTGEAETPAGPL---PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSH 133
Query: 421 EQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV--TTAVRGTVGHIAPEY 478
+ IIHRDVK ANI++ + V DFG+A+ + + V T AV GT +++PE
Sbjct: 134 QNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 479 LSTGQSSEKTDVFGFGVLLLELITGQ 504
++DV+ G +L E++TG+
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 107/227 (47%), Gaps = 27/227 (11%)
Query: 311 LGQGGYGVVYKGCL-PNRMVVAVKRLKD---PNFTGEVQFQTEVEMIGLALHRNLLRLYG 366
+G+G +G V+ G L + +VAVK ++ P+ + +F E ++ H N++RL G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDL--KAKFLQEARILKQYSHPNIVRLIG 179
Query: 367 FCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPK 426
C + +V + G LR T A+ L + + A G+ YL +C
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLR-TEGAR--LRVKTLLQMVGDAAAGMEYLESKC--- 233
Query: 427 IIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHI-----APEYLST 481
IHRD+ A N L+ E + DFG++ R ++ A G + + APE L+
Sbjct: 234 CIHRDLAARNCLVTEKNVLKISDFGMS----REEADGVYAASGGLRQVPVKWTAPEALNY 289
Query: 482 GQSSEKTDVFGFGVLLLELIT--GQKALDVGNGQ----VQKGMILDC 522
G+ S ++DV+ FG+LL E + ++ N Q V+KG L C
Sbjct: 290 GRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPC 336
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 111/219 (50%), Gaps = 27/219 (12%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPN----RMVVAVKRLKD---PNFTGEVQFQTEVEMIGL 355
F +L G +G VYKG +P ++ VA+K L++ P E+ E ++
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL--DEAYVMAS 80
Query: 356 ALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQ---AKPPLDWNRRMHIALGT 412
+ ++ RL G C+T +L++ MP G + D +R+ + ++ L+W +
Sbjct: 81 VDNPHVCRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQI 133
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGT 470
A+G+ YL ++ +++HRD+ A N+L+ + DFGLAKLL + ++ H +
Sbjct: 134 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVP 189
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALD 508
+ +A E + + ++DV+ +GV + EL+T G K D
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 104/223 (46%), Gaps = 27/223 (12%)
Query: 294 SFRELQIATGNFSPKNI------LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQ-F 346
S ++ + T + +P++ LG G +G VYK V+A ++ D E++ +
Sbjct: 22 SMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY 81
Query: 347 QTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRM 406
E++++ H N+++L ++ + G+V + + + PL ++
Sbjct: 82 MVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELER---PLTESQIQ 138
Query: 407 HIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLA----KLLDRRDSH 462
+ T L YLH+ KIIHRD+KA NIL + + DFG++ + + RRDS
Sbjct: 139 VVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSF 195
Query: 463 VTTAVRGTVGHIAPEYLSTGQSSE-----KTDVFGFGVLLLEL 500
+ GT +APE + S + K DV+ G+ L+E+
Sbjct: 196 I-----GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 92/210 (43%), Gaps = 19/210 (9%)
Query: 305 FSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFTGEVQFQ---TEVEMIGLALHRN 360
FS +G G +G VY + N VVA+K++ ++Q EV + H N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 361 LLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLH 420
++ G + LV Y GS +D L K PL + G +GL YLH
Sbjct: 116 TIQYRGCYLREHTAWLVMEYC-LGSASDLLE---VHKKPLQEVEIAAVTHGALQGLAYLH 171
Query: 421 EQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEY-- 478
+IHRDVKA NILL E +GDFG A ++ + V GT +APE
Sbjct: 172 SH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPYWMAPEVIL 223
Query: 479 -LSTGQSSEKTDVFGFGVLLLELITGQKAL 507
+ GQ K DV+ G+ +EL + L
Sbjct: 224 AMDEGQYDGKVDVWSLGITCIELAERKPPL 253
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 104/223 (46%), Gaps = 27/223 (12%)
Query: 294 SFRELQIATGNFSPKNI------LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQ-F 346
S ++ + T + +P++ LG G +G VYK V+A ++ D E++ +
Sbjct: 22 SMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY 81
Query: 347 QTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRM 406
E++++ H N+++L ++ + G+V + + + PL ++
Sbjct: 82 MVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELER---PLTESQIQ 138
Query: 407 HIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLA----KLLDRRDSH 462
+ T L YLH+ KIIHRD+KA NIL + + DFG++ + + RRDS
Sbjct: 139 VVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSF 195
Query: 463 VTTAVRGTVGHIAPEYLSTGQSSE-----KTDVFGFGVLLLEL 500
+ GT +APE + S + K DV+ G+ L+E+
Sbjct: 196 I-----GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 111/219 (50%), Gaps = 27/219 (12%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPN----RMVVAVKRLKD---PNFTGEVQFQTEVEMIGL 355
F +LG G +G VYKG +P ++ VA+K L++ P E+ E ++
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL--DEAYVMAS 77
Query: 356 ALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQ---AKPPLDWNRRMHIALGT 412
+ ++ RL G C+T +L++ MP G + D +R+ + ++ L+W +
Sbjct: 78 VDNPHVCRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQI 130
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGT 470
A+G+ YL ++ +++HRD+ A N+L+ + DFG AKLL + ++ H +
Sbjct: 131 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-KVP 186
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALD 508
+ +A E + + ++DV+ +GV + EL+T G K D
Sbjct: 187 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 90/206 (43%), Gaps = 22/206 (10%)
Query: 311 LGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFTGE---VQFQTEVEMIGLALHRNLLRLYG 366
LG+G +G VY + +VA+K L E Q + E+E+ H N+LRLY
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYN 90
Query: 367 FCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPK 426
+ L+ Y P G + L Q D R I A L+Y H + K
Sbjct: 91 YFYDRRRIYLILEYAPRGELYKEL----QKSCTFDEQRTATIMEELADALMYCHGK---K 143
Query: 427 IIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVR----GTVGHIAPEYLSTG 482
+IHRD+K N+LL E + DFG + H + R GT+ ++ PE +
Sbjct: 144 VIHRDIKPENLLLGLKGELKIADFGWS-------VHAPSLRRKTMCGTLDYLPPEMIEGR 196
Query: 483 QSSEKTDVFGFGVLLLELITGQKALD 508
+EK D++ GVL EL+ G +
Sbjct: 197 MHNEKVDLWCIGVLCYELLVGNPPFE 222
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 96/204 (47%), Gaps = 22/204 (10%)
Query: 311 LGQGGYGVVYKGCL-PNR----MVVAVKRLK-DPNFTGEVQFQTEVEMIGLALHRNLLRL 364
LG+G +G V C P +VAVK LK D ++ E++++ H ++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 365 YGFCMTPEER--LLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQ 422
G C E+ LV Y+P GS+ D L + + + + A G+ YLH Q
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL-----PRHSIGLAQLLLFAQQICEGMAYLHAQ 136
Query: 423 CNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVR----GTVGHIAPEY 478
IHR++ A N+LLD +GDFGLAK + + H VR V APE
Sbjct: 137 ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVP--EGHEYYRVREDGDSPVFWYAPEC 191
Query: 479 LSTGQSSEKTDVFGFGVLLLELIT 502
L + +DV+ FGV L EL+T
Sbjct: 192 LKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 110/219 (50%), Gaps = 27/219 (12%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPN----RMVVAVKRLKD---PNFTGEVQFQTEVEMIGL 355
F +L G +G VYKG +P ++ VA+K L++ P E+ E ++
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL--DEAYVMAS 73
Query: 356 ALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQ---AKPPLDWNRRMHIALGT 412
+ ++ RL G C+T +L+ MP G + D +R+ + ++ L+W +
Sbjct: 74 VDNPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQI 126
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGT 470
A+G+ YL ++ +++HRD+ A N+L+ + DFGLAKLL + ++ H +
Sbjct: 127 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVP 182
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALD 508
+ +A E + + ++DV+ +GV + EL+T G K D
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 111/219 (50%), Gaps = 27/219 (12%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPN----RMVVAVKRLKD---PNFTGEVQFQTEVEMIGL 355
F +LG G +G VYKG +P ++ VA+K L++ P E+ E ++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL--DEAYVMAS 75
Query: 356 ALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQ---AKPPLDWNRRMHIALGT 412
+ ++ RL G C+T +L++ MP G + D +R+ + ++ L+W +
Sbjct: 76 VDNPHVCRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQI 128
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGT 470
A+G+ YL ++ +++HRD+ A N+L+ + DFG AKLL + ++ H +
Sbjct: 129 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-KVP 184
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALD 508
+ +A E + + ++DV+ +GV + EL+T G K D
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 90/203 (44%), Gaps = 19/203 (9%)
Query: 305 FSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFTGEVQFQ---TEVEMIGLALHRN 360
FS +G G +G VY + N VVA+K++ ++Q EV + H N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 361 LLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLH 420
++ G + LV Y GS +D L K PL + G +GL YLH
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCL-GSASDLLE---VHKKPLQEVEIAAVTHGALQGLAYLH 132
Query: 421 EQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEY-- 478
+IHRDVKA NILL E +GDFG A ++ + V GT +APE
Sbjct: 133 SH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPYWMAPEVIL 184
Query: 479 -LSTGQSSEKTDVFGFGVLLLEL 500
+ GQ K DV+ G+ +EL
Sbjct: 185 AMDEGQYDGKVDVWSLGITCIEL 207
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 100/233 (42%), Gaps = 15/233 (6%)
Query: 300 IATGNFSPKNILGQGGYGVVYKGCLPNR-MVVAVKRLKDPNFTGEVQFQTEVEMIGLAL- 357
+AT + P +G G YG VYK P+ VA+K ++ PN + T E+ L
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 358 ----HRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPP--LDWNRRMHIALG 411
H N++RL C T + + V LR PP L +
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 412 TARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTV 471
RGL +LH C I+HRD+K NIL+ + DFGLA++ + + V T+
Sbjct: 121 FLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVV--TL 175
Query: 472 GHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQV-QKGMILDCV 523
+ APE L + D++ G + E+ +K L GN + Q G I D +
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNSEADQLGKIFDLI 227
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 111/219 (50%), Gaps = 27/219 (12%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPN----RMVVAVKRLKD---PNFTGEVQFQTEVEMIGL 355
F +LG G +G VYKG +P ++ VA+K L++ P E+ E ++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL--DEAYVMAS 75
Query: 356 ALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQ---AKPPLDWNRRMHIALGT 412
+ ++ RL G C+T +L++ MP G + D +R+ + ++ L+W +
Sbjct: 76 VDNPHVCRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQI 128
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGT 470
A+G+ YL ++ +++HRD+ A N+L+ + DFG AKLL + ++ H +
Sbjct: 129 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-KVP 184
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALD 508
+ +A E + + ++DV+ +GV + EL+T G K D
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 110/219 (50%), Gaps = 27/219 (12%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPN----RMVVAVKRLKD---PNFTGEVQFQTEVEMIGL 355
F +L G +G VYKG +P ++ VA+K L++ P E+ E ++
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL--DEAYVMAS 80
Query: 356 ALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQ---AKPPLDWNRRMHIALGT 412
+ ++ RL G C+T +L+ MP G + D +R+ + ++ L+W +
Sbjct: 81 VDNPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQI 133
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGT 470
A+G+ YL ++ +++HRD+ A N+L+ + DFGLAKLL + ++ H +
Sbjct: 134 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVP 189
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALD 508
+ +A E + + ++DV+ +GV + EL+T G K D
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 110/219 (50%), Gaps = 27/219 (12%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPN----RMVVAVKRLKD---PNFTGEVQFQTEVEMIGL 355
F +LG G +G VYKG +P ++ VA+K L++ P E+ E ++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL--DEAYVMAS 75
Query: 356 ALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQ---AKPPLDWNRRMHIALGT 412
+ ++ RL G C+T +L+ MP G + D +R+ + ++ L+W +
Sbjct: 76 VDNPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQI 128
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGT 470
A+G+ YL ++ +++HRD+ A N+L+ + DFG AKLL + ++ H +
Sbjct: 129 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-KVP 184
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALD 508
+ +A E + + ++DV+ +GV + EL+T G K D
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 96/199 (48%), Gaps = 13/199 (6%)
Query: 311 LGQGGYGVVY--KGCLPNRMVVAVKRLKDPNFTGE---VQFQTEVEMIGLALHRNLLRLY 365
LG GG VY + + N + VA+K + P E +F+ EV H+N++ +
Sbjct: 19 LGGGGMSTVYLAEDTILN-IKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMI 77
Query: 366 GFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNP 425
+ LV Y+ ++++ + ++ PL + ++ G+ + H+
Sbjct: 78 DVDEEDDCYYLVMEYIEGPTLSEYI----ESHGPLSVDTAINFTNQILDGIKHAHDM--- 130
Query: 426 KIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSS 485
+I+HRD+K NIL+D + + DFG+AK L T V GTV + +PE +
Sbjct: 131 RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATD 190
Query: 486 EKTDVFGFGVLLLELITGQ 504
E TD++ G++L E++ G+
Sbjct: 191 ECTDIYSIGIVLYEMLVGE 209
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 88/179 (49%), Gaps = 13/179 (7%)
Query: 330 VAVKRLKDPNFTGE--VQFQTEVEMIGLALHRNLLRLYGFCMTPEER--LLVYPYMPNGS 385
VAVK LK P G + E+E++ H N+++ G C L+ ++P+GS
Sbjct: 53 VAVKSLK-PESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGS 111
Query: 386 VADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEA 445
+ + L + ++ +++ A+ +G+ YL + + +HRD+ A N+L++ +
Sbjct: 112 LKEYLPKNKNK---INLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQV 165
Query: 446 VVGDFGLAKLL--DRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT 502
+GDFGL K + D+ V V APE L + +DV+ FGV L EL+T
Sbjct: 166 KIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 110/219 (50%), Gaps = 27/219 (12%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPN----RMVVAVKRLKD---PNFTGEVQFQTEVEMIGL 355
F +LG G +G VYKG +P ++ VA+ L++ P E+ E ++
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEIL--DEAYVMAS 107
Query: 356 ALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQ---AKPPLDWNRRMHIALGT 412
+ ++ RL G C+T +L+ MP G + D +R+ + ++ L+W +
Sbjct: 108 VDNPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQI 160
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGT 470
A+G+ YL ++ +++HRD+ A N+L+ + DFGLAKLL + ++ H +
Sbjct: 161 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVP 216
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALD 508
+ +A E + + ++DV+ +GV + EL+T G K D
Sbjct: 217 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 255
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 110/219 (50%), Gaps = 27/219 (12%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPN----RMVVAVKRLKD---PNFTGEVQFQTEVEMIGL 355
F +LG G +G VYKG +P ++ VA+K L++ P E+ E ++
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL--DEAYVMAS 80
Query: 356 ALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQ---AKPPLDWNRRMHIALGT 412
+ ++ RL G C+T +L+ MP G + D +R+ + ++ L+W +
Sbjct: 81 VDNPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQI 133
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGT 470
A+G+ YL ++ +++HRD+ A N+L+ + DFG AKLL + ++ H +
Sbjct: 134 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-KVP 189
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALD 508
+ +A E + + ++DV+ +GV + EL+T G K D
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 110/219 (50%), Gaps = 27/219 (12%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPN----RMVVAVKRLKD---PNFTGEVQFQTEVEMIGL 355
F +LG G +G VYKG +P ++ VA+K L++ P E+ E ++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL--DEAYVMAS 73
Query: 356 ALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQ---AKPPLDWNRRMHIALGT 412
+ ++ RL G C+T +L+ MP G + D +R+ + ++ L+W +
Sbjct: 74 VDNPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQI 126
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGT 470
A+G+ YL ++ +++HRD+ A N+L+ + DFG AKLL + ++ H +
Sbjct: 127 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-KVP 182
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALD 508
+ +A E + + ++DV+ +GV + EL+T G K D
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 100/224 (44%), Gaps = 31/224 (13%)
Query: 304 NFSPKNILGQGGYGVVYKGCLPNRM---VVAVKRLKDPNFT-GEVQFQTEVEMIGLALHR 359
+F P LG+GG+GVV++ N++ A+KR++ PN + EV+ + H
Sbjct: 6 DFEPIQCLGRGGFGVVFEA--KNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHP 63
Query: 360 NLLRLYGFCMTPEERLLVYPYMPNGSV--------ADCLRDTRQAKPPLDWNRR---MHI 408
++R + + + P P + + L+D + ++ R +HI
Sbjct: 64 GIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHI 123
Query: 409 ALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVT---- 464
L A + +LH + ++HRD+K +NI VGDFGL +D+ + T
Sbjct: 124 FLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTP 180
Query: 465 -------TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELI 501
T GT +++PE + S K D+F G++L EL+
Sbjct: 181 MPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 104/212 (49%), Gaps = 15/212 (7%)
Query: 299 QIATGNFSPKNILGQGGYGVVYKGCL--PNR--MVVAVKRLKDPNFTGEVQ--FQTEVEM 352
+I + I+G G G V G L P + + VA+K LK +T + F +E +
Sbjct: 45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALK-AGYTERQRRDFLSEASI 103
Query: 353 IGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGT 412
+G H N++RL G ++V YM NGS+ LR T + + + + G
Sbjct: 104 MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLR-THDGQ--FTIMQLVGMLRGV 160
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGT 470
G+ YL + +HRD+ A N+L+D + V DFGL+++L D ++ TT +
Sbjct: 161 GAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIP 217
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT 502
+ APE ++ S +DV+ FGV++ E++
Sbjct: 218 IRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 96/220 (43%), Gaps = 22/220 (10%)
Query: 295 FRELQIATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIG 354
+E I ++G+G +G VY G + + + ++ N F+ EV
Sbjct: 25 LQEWDIPFEQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYR 84
Query: 355 LALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTAR 414
H N++ G CM+P ++ ++ +RD AK LD N+ IA +
Sbjct: 85 QTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRD---AKIVLDVNKTRQIAQEIVK 141
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKL-----LDRRDSHVTTAVRG 469
G+ YLH + I+H+D+K+ N+ D + V+ DFGL + RR+ + G
Sbjct: 142 GMGYLHAKG---ILHKDLKSKNVFYDNG-KVVITDFGLFSISGVLQAGRREDKLRIQ-NG 196
Query: 470 TVGHIAPEY---LSTGQSSEK------TDVFGFGVLLLEL 500
+ H+APE LS +K +DVF G + EL
Sbjct: 197 WLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYEL 236
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 88/179 (49%), Gaps = 13/179 (7%)
Query: 330 VAVKRLKDPNFTGE--VQFQTEVEMIGLALHRNLLRLYGFCMTPEER--LLVYPYMPNGS 385
VAVK LK P G + E+E++ H N+++ G C L+ ++P+GS
Sbjct: 41 VAVKSLK-PESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGS 99
Query: 386 VADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEA 445
+ + L + ++ +++ A+ +G+ YL + + +HRD+ A N+L++ +
Sbjct: 100 LKEYLPKNKNK---INLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQV 153
Query: 446 VVGDFGLAKLL--DRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT 502
+GDFGL K + D+ V V APE L + +DV+ FGV L EL+T
Sbjct: 154 KIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 106/235 (45%), Gaps = 49/235 (20%)
Query: 302 TGNFSPKNILGQGGYGVVYKG--CLPNRMVVAVKRLKDPNFTGEVQFQT---EVEMIGLA 356
+F +LGQG +G V K L +R A+K+++ E + T EV ++
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYY-AIKKIRHT----EEKLSTILSEVMLLASL 59
Query: 357 LHRNLLRLYGFCMTPEERLLVYP---------------YMPNGSVADCLRDTRQAKPPLD 401
H+ ++R Y + E R V P Y N ++ D + + +
Sbjct: 60 NHQYVVRYYAAWL--ERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDE 117
Query: 402 WNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRR-- 459
+ R L L Y+H Q IIHRD+K NI +DES +GDFGLAK + R
Sbjct: 118 YWRLFRQIL---EALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLD 171
Query: 460 ----DS--------HVTTAVRGTVGHIAPEYLS-TGQSSEKTDVFGFGVLLLELI 501
DS ++T+A+ GT ++A E L TG +EK D++ G++ E+I
Sbjct: 172 ILKLDSQNLPGSSDNLTSAI-GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 94/204 (46%), Gaps = 22/204 (10%)
Query: 311 LGQGGYGVVYKGCL-PNR----MVVAVKRLK-DPNFTGEVQFQTEVEMIGLALHRNLLRL 364
LG+G +G V C P +VAVK LK D ++ E++++ H ++++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 365 YGFC--MTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQ 422
G C LV Y+P GS+ D L + + + + A G+ YLH Q
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYL-----PRHSIGLAQLLLFAQQICEGMAYLHAQ 153
Query: 423 CNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVR----GTVGHIAPEY 478
IHRD+ A N+LLD +GDFGLAK + + H VR V APE
Sbjct: 154 ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP--EGHEXYRVREDGDSPVFWYAPEC 208
Query: 479 LSTGQSSEKTDVFGFGVLLLELIT 502
L + +DV+ FGV L EL+T
Sbjct: 209 LKEYKFYYASDVWSFGVTLYELLT 232
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 100/239 (41%), Gaps = 24/239 (10%)
Query: 300 IATGNFSPKNILGQGGYGVVYKGCLPNR-MVVAVKRLKDPNFTG-----------EVQFQ 347
+AT + P +G G YG VYK P+ VA+K ++ PN G EV
Sbjct: 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALL 65
Query: 348 TEVEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPP--LDWNRR 405
+E H N++RL C T + + V LR PP L
Sbjct: 66 RRLEAFE---HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETI 122
Query: 406 MHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTT 465
+ RGL +LH C I+HRD+K NIL+ + DFGLA++ + T
Sbjct: 123 KDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQ--MALT 177
Query: 466 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQV-QKGMILDCV 523
V T+ + APE L + D++ G + E+ +K L GN + Q G I D +
Sbjct: 178 PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNSEADQLGKIFDLI 235
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 100/214 (46%), Gaps = 29/214 (13%)
Query: 309 NILGQGGYGVVYKGCLPNR----MVVAVKRLK-DPNFTGEVQ-FQTEVEMIGLALHRNLL 362
ILG+G +G V +G L + VAVK +K D + E++ F +E + H N++
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 363 RLYGFCMTPEER-----LLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGT----- 412
RL G C+ + +++ P+M G + L +R P HI L T
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGP------KHIPLQTLLKFM 153
Query: 413 ---ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAV-R 468
A G+ YL N +HRD+ A N +L + V DFGL+K + D + + +
Sbjct: 154 VDIALGMEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAK 210
Query: 469 GTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT 502
V IA E L+ + K+DV+ FGV + E+ T
Sbjct: 211 MPVKWIAIESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 128/274 (46%), Gaps = 35/274 (12%)
Query: 308 KNILGQGGYGVVYKG--CLPNR--MVVAVKRLKDPNFTGEVQ--FQTEVEMIGLALHRNL 361
+ ++G G +G V G LP + + VA+K LK +T + + F E ++G H N+
Sbjct: 48 ERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLK-VGYTEKQRRDFLCEASIMGQFDHPNV 106
Query: 362 LRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHE 421
+ L G + ++V +M NG++ LR + + + + G A G+ YL +
Sbjct: 107 VHLEGVVTRGKPVMIVIEFMENGALDAFLR---KHDGQFTVIQLVGMLRGIAAGMRYLAD 163
Query: 422 QCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGTVGHIAPEYL 479
+HRD+ A NIL++ + V DFGL++++ D + TT + V APE +
Sbjct: 164 M---GYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAI 220
Query: 480 STGQSSEKTDVFGFGVLLLELIT-GQKAL-DVGNGQVQKGMILDCVRTLHEERRLDVLID 537
+ + +DV+ +G+++ E+++ G++ D+ N D ++ + E RL +D
Sbjct: 221 QYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ--------DVIKAIEEGYRLPAPMD 272
Query: 538 RDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
P L QL L C Q RPK
Sbjct: 273 C-------PAGLH---QLMLDCWQKERAERPKFE 296
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 103/212 (48%), Gaps = 15/212 (7%)
Query: 299 QIATGNFSPKNILGQGGYGVVYKGCL--PNR--MVVAVKRLKDPNFTGEVQ--FQTEVEM 352
+I + I+G G G V G L P + + VA+K LK +T + F +E +
Sbjct: 45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALK-AGYTERQRRDFLSEASI 103
Query: 353 IGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGT 412
+G H N++RL G ++V YM NGS+ LR T + + + + G
Sbjct: 104 MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLR-THDGQ--FTIMQLVGMLRGV 160
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGT 470
G+ YL + +HRD+ A N+L+D + V DFGL+++L D + TT +
Sbjct: 161 GAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIP 217
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT 502
+ APE ++ S +DV+ FGV++ E++
Sbjct: 218 IRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 103/223 (46%), Gaps = 27/223 (12%)
Query: 294 SFRELQIATGNFSPKNI------LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQ-F 346
S ++ + T + +P++ LG G +G VYK V+A ++ D E++ +
Sbjct: 22 SMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY 81
Query: 347 QTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRM 406
E++++ H N+++L ++ + G+V + + + PL ++
Sbjct: 82 MVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELER---PLTESQIQ 138
Query: 407 HIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLA----KLLDRRDSH 462
+ T L YLH+ KIIHRD+KA NIL + + DFG++ + + RRD
Sbjct: 139 VVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXF 195
Query: 463 VTTAVRGTVGHIAPEYLSTGQSSE-----KTDVFGFGVLLLEL 500
+ GT +APE + S + K DV+ G+ L+E+
Sbjct: 196 I-----GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 127/281 (45%), Gaps = 58/281 (20%)
Query: 304 NFSPKNILGQGGYG-VVYKGCLPNRMVVAVKRLKDPNFT---GEVQFQTEVEMIGLALHR 359
+F PK++LG G G +VY+G NR VAVKR+ F+ EVQ E + H
Sbjct: 25 SFCPKDVLGHGAEGTIVYRGMFDNR-DVAVKRILPECFSFADREVQLLRESDE-----HP 78
Query: 360 NLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIAL-------GT 412
N++R FC + + + Y+ A L++ + K D+ H+ L T
Sbjct: 79 NVIRY--FCTEKDRQ---FQYIAIELCAATLQEYVEQK---DF---AHLGLEPITLLQQT 127
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDE-----SFEAVVGDFGLAKLL--DRRDSHVTT 465
GL +LH + I+HRD+K NIL+ +A++ DFGL K L R +
Sbjct: 128 TSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRS 184
Query: 466 AVRGTVGHIAPEYLSTGQSSEKT---DVFGFGVLLLELITGQKALDVGNGQVQKGMI--- 519
V GT G IAPE LS T D+F G + +I+ + Q Q ++
Sbjct: 185 GVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGA 244
Query: 520 --LDCVRTLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQ 558
LDC LH E+ DV I R+L +EKM+ + Q
Sbjct: 245 CSLDC---LHPEKHEDV-IAREL--------IEKMIAMDPQ 273
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 101/203 (49%), Gaps = 17/203 (8%)
Query: 310 ILGQGGYGVVYKG-CLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFC 368
+LG+G YG+VY G L N++ +A+K + + + E+ + H+N+++ G
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 369 MTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTAR---GLLYLHEQCNP 425
+ +P GS++ LR PL N + I T + GL YLH+
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSKWG---PLKDNEQT-IGFYTKQILEGLKYLHDN--- 141
Query: 426 KIIHRDVKAANILLDESFEAV--VGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQ 483
+I+HRD+K N+L++ ++ V + DFG +K L + T GT+ ++APE + G
Sbjct: 142 QIVHRDIKGDNVLIN-TYSGVLKISDFGTSKRLAGINP-CTETFTGTLQYMAPEIIDKGP 199
Query: 484 S--SEKTDVFGFGVLLLELITGQ 504
+ D++ G ++E+ TG+
Sbjct: 200 RGYGKAADIWSLGCTIIEMATGK 222
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 90/185 (48%), Gaps = 18/185 (9%)
Query: 330 VAVKRLK-----DPNFTGEVQFQTEVEMIGLALHRNLLRLY--GFCMTPEERLLVYPYMP 382
VAVK L+ DP+F ++F+ E + H ++ +Y G TP L PY+
Sbjct: 40 VAVKVLRADLARDPSFY--LRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL---PYIV 94
Query: 383 NGSVADC-LRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDE 441
V LRD + P+ R + + + L + H+ IIHRDVK ANI++
Sbjct: 95 MEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISA 151
Query: 442 SFEAVVGDFGLAKLLDRRDSHV--TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLE 499
+ V DFG+A+ + + V T AV GT +++PE ++DV+ G +L E
Sbjct: 152 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYE 211
Query: 500 LITGQ 504
++TG+
Sbjct: 212 VLTGE 216
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 90/185 (48%), Gaps = 18/185 (9%)
Query: 330 VAVKRLK-----DPNFTGEVQFQTEVEMIGLALHRNLLRLY--GFCMTPEERLLVYPYMP 382
VAVK L+ DP+F ++F+ E + H ++ +Y G TP L PY+
Sbjct: 57 VAVKVLRADLARDPSFY--LRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL---PYIV 111
Query: 383 NGSVADC-LRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDE 441
V LRD + P+ R + + + L + H+ IIHRDVK ANI++
Sbjct: 112 MEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISA 168
Query: 442 SFEAVVGDFGLAKLLDRRDSHV--TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLE 499
+ V DFG+A+ + + V T AV GT +++PE ++DV+ G +L E
Sbjct: 169 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYE 228
Query: 500 LITGQ 504
++TG+
Sbjct: 229 VLTGE 233
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 90/185 (48%), Gaps = 18/185 (9%)
Query: 330 VAVKRLK-----DPNFTGEVQFQTEVEMIGLALHRNLLRLY--GFCMTPEERLLVYPYMP 382
VAVK L+ DP+F ++F+ E + H ++ +Y G TP L PY+
Sbjct: 40 VAVKVLRADLARDPSFY--LRFRREAQNAAALNHPAIVAVYATGEAETPAGPL---PYIV 94
Query: 383 NGSVADC-LRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDE 441
V LRD + P+ R + + + L + H+ IIHRDVK ANI++
Sbjct: 95 MEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISA 151
Query: 442 SFEAVVGDFGLAKLLDRRDSHV--TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLE 499
+ V DFG+A+ + + V T AV GT +++PE ++DV+ G +L E
Sbjct: 152 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYE 211
Query: 500 LITGQ 504
++TG+
Sbjct: 212 VLTGE 216
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 101/203 (49%), Gaps = 17/203 (8%)
Query: 310 ILGQGGYGVVYKG-CLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFC 368
+LG+G YG+VY G L N++ +A+K + + + E+ + H+N+++ G
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 369 MTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTAR---GLLYLHEQCNP 425
+ +P GS++ LR PL N + I T + GL YLH+
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSKWG---PLKDNEQT-IGFYTKQILEGLKYLHDN--- 127
Query: 426 KIIHRDVKAANILLDESFEAV--VGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQ 483
+I+HRD+K N+L++ ++ V + DFG +K L + T GT+ ++APE + G
Sbjct: 128 QIVHRDIKGDNVLIN-TYSGVLKISDFGTSKRLAGINP-CTETFTGTLQYMAPEIIDKGP 185
Query: 484 S--SEKTDVFGFGVLLLELITGQ 504
+ D++ G ++E+ TG+
Sbjct: 186 RGYGKAADIWSLGCTIIEMATGK 208
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 102/215 (47%), Gaps = 28/215 (13%)
Query: 311 LGQGGYGVVYK------GCLPNRMVVAVKRLKDPNFTGEVQ-FQTEVEMIG-LALHRNLL 362
LG G +G V + G + VAVK LK E + +E++++ L H N++
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 363 RLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRR--------------MHI 408
L G C L++ Y G + + LR R+ P L+++ +H
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLR--RKRPPGLEYSYNPSHNPEEQLSSRDLLHF 171
Query: 409 ALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAK-LLDRRDSHVTTAV 467
+ A+G+ +L + IHRDV A N+LL A +GDFGLA+ +++ + V
Sbjct: 172 SSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 228
Query: 468 RGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT 502
R V +APE + + ++DV+ +G+LL E+ +
Sbjct: 229 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 93/214 (43%), Gaps = 14/214 (6%)
Query: 304 NFSPKNILGQGGYG-VVYKGCLPNRMVVAVKRLKDPNFTGE--VQFQT-EVEMIGLALHR 359
+F ILG+G + VV L A+K L+ + E V + T E +++ H
Sbjct: 38 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 97
Query: 360 NLLRLYGFCMTPEERLLV-YPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++LY FC +E+L Y NG + +R D L Y
Sbjct: 98 FFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 152
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV-TTAVRGTVGHIAPE 477
LH + IIHRD+K NILL+E + DFG AK+L GT +++PE
Sbjct: 153 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 209
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGN 511
L+ + + +D++ G ++ +L+ G GN
Sbjct: 210 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 243
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 31/220 (14%)
Query: 311 LGQGGYGVVYK------GCLPNRMVVAVKRLKDPNFTGEVQ-FQTEVEMIG-LALHRNLL 362
LG G +G V + G + VAVK LK E + +E++++ L H N++
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 98
Query: 363 RLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQA------KP-------------PLDWN 403
L G C L++ Y G + + LR +A P PL+
Sbjct: 99 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELR 158
Query: 404 RRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAK-LLDRRDSH 462
+H + A+G+ +L + IHRDV A N+LL A +GDFGLA+ +++ +
Sbjct: 159 DLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 215
Query: 463 VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT 502
V R V +APE + + ++DV+ +G+LL E+ +
Sbjct: 216 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 106/224 (47%), Gaps = 19/224 (8%)
Query: 311 LGQGGYGVVYKGCLPNR---MVVAVKRLKDPNFTGEVQ-FQTEVEMIGLALHRNLLRLYG 366
LG G +G V +G R + VA+K LK + + E +++ + ++RL G
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 367 FCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPK 426
C E +LV G + L R+ P + +H + G+ YL E+
Sbjct: 78 VCQA-EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLH---QVSMGMKYLEEK---N 130
Query: 427 IIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVT--TAVRGTVGHIAPEYLSTGQS 484
+HRD+ A N+LL A + DFGL+K L DS+ T +A + + APE ++ +
Sbjct: 131 FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKF 190
Query: 485 SEKTDVFGFGVLLLELIT-GQKALDVGNGQ-----VQKGMILDC 522
S ++DV+ +GV + E ++ GQK G +++G ++C
Sbjct: 191 SSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMEC 234
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 13/213 (6%)
Query: 297 ELQIATGNFSPKNILGQGGYGVVYKGCLPN-RMVVAVKRLKDPNFTGEVQFQ-TEVEMIG 354
++++ +F +LG+G +G V+ A+K LK + + T VE
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 355 LAL---HRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALG 411
L+L H L ++ T E V Y+ G + ++ + D +R A
Sbjct: 72 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK----FDLSRATFYAAE 127
Query: 412 TARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTV 471
GL +LH + I++RD+K NILLD+ + DFG+ K D+ T GT
Sbjct: 128 IILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK-TNEFCGTP 183
Query: 472 GHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQ 504
+IAPE L + + D + FGVLL E++ GQ
Sbjct: 184 DYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 216
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 104/235 (44%), Gaps = 49/235 (20%)
Query: 302 TGNFSPKNILGQGGYGVVYKG--CLPNRMVVAVKRLKDPNFTGEVQFQT---EVEMIGLA 356
+F +LGQG +G V K L +R A+K+++ E + T EV ++
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYY-AIKKIRHT----EEKLSTILSEVXLLASL 59
Query: 357 LHRNLLRLYGFCMTPEERLLVYP---------------YMPNGSVADCLRDTRQAKPPLD 401
H+ ++R Y + E R V P Y N ++ D + + +
Sbjct: 60 NHQYVVRYYAAWL--ERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDE 117
Query: 402 WNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRR-- 459
+ R L L Y+H Q IIHR++K NI +DES +GDFGLAK + R
Sbjct: 118 YWRLFRQIL---EALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLD 171
Query: 460 ----DS--------HVTTAVRGTVGHIAPEYLS-TGQSSEKTDVFGFGVLLLELI 501
DS ++T+A+ GT ++A E L TG +EK D + G++ E I
Sbjct: 172 ILKLDSQNLPGSSDNLTSAI-GTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 93/197 (47%), Gaps = 21/197 (10%)
Query: 311 LGQGGYGVV----YKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYG 366
+G+G +G V Y+G N+ VAVK +K N F E ++ H NL++L G
Sbjct: 14 IGKGEFGDVMLGDYRG---NK--VAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLG 66
Query: 367 FCMTPEERL-LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNP 425
+ + L +V YM GS+ D LR + + L + + +L + YL
Sbjct: 67 VIVEEKGGLYIVTEYMAKGSLVDYLRS--RGRSVLGGDCLLKFSLDVCEAMEYLE---GN 121
Query: 426 KIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSS 485
+HRD+ A N+L+ E A V DFGL K S + V APE L + S
Sbjct: 122 NFVHRDLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREKKFS 177
Query: 486 EKTDVFGFGVLLLELIT 502
K+DV+ FG+LL E+ +
Sbjct: 178 TKSDVWSFGILLWEIYS 194
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 124/284 (43%), Gaps = 39/284 (13%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMT 370
+G+G YG V++G V AVK + + +TE+ + H N+L MT
Sbjct: 45 VGKGRYGEVWRGSWQGENV-AVKIFSSRDEKSWFR-ETELYNTVMLRHENILGFIASDMT 102
Query: 371 PE----ERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLH-----E 421
+ L+ Y GS+ D L+ T LD + I L A GL +LH
Sbjct: 103 SRHSSTQLWLITHYHEMGSLYDYLQLT-----TLDTVSCLRIVLSIASGLAHLHIEIFGT 157
Query: 422 QCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVG---HIAPEY 478
Q P I HRD+K+ NIL+ ++ + + D GLA + + + + VG ++APE
Sbjct: 158 QGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEV 217
Query: 479 LSTG------QSSEKTDVFGFGVLLLELITGQKALDVGNGQVQ--KGMILDCVRT--LHE 528
L S ++ D++ FG++L E+ V NG V+ K D V E
Sbjct: 218 LDETIQVDCFDSYKRVDIWAFGLVLWEVARRM----VSNGIVEDYKPPFYDVVPNDPSFE 273
Query: 529 ERRLDVLIDRDL-----KGSFDPTELEKMVQLALQCTQSHPNLR 567
+ R V +D+ + DPT L + +L +C +P+ R
Sbjct: 274 DMRKVVCVDQQRPNIPNRWFSDPT-LTSLAKLMKECWYQNPSAR 316
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 93/197 (47%), Gaps = 21/197 (10%)
Query: 311 LGQGGYGVV----YKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYG 366
+G+G +G V Y+G N+ VAVK +K N F E ++ H NL++L G
Sbjct: 29 IGKGEFGDVMLGDYRG---NK--VAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLG 81
Query: 367 FCMTPEERL-LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNP 425
+ + L +V YM GS+ D LR + + L + + +L + YL
Sbjct: 82 VIVEEKGGLYIVTEYMAKGSLVDYLRS--RGRSVLGGDCLLKFSLDVCEAMEYLE---GN 136
Query: 426 KIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSS 485
+HRD+ A N+L+ E A V DFGL K V+ T APE L + S
Sbjct: 137 NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREKKFS 192
Query: 486 EKTDVFGFGVLLLELIT 502
K+DV+ FG+LL E+ +
Sbjct: 193 TKSDVWSFGILLWEIYS 209
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 101/211 (47%), Gaps = 12/211 (5%)
Query: 300 IATGNFSPKNILGQGGYGVVYKGCLPN----RMVVAVKRLK-DPNFTGEVQFQTEVEMIG 354
IA + ILG+G +G VY+G N ++ VAVK K D + +F +E ++
Sbjct: 9 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 68
Query: 355 LALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTAR 414
H ++++L G + E ++ P G + L + + L + +L +
Sbjct: 69 NLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVL---TLVLYSLQICK 124
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHI 474
+ YL E N +HRD+ NIL+ +GDFGL++ ++ D + + R + +
Sbjct: 125 AMAYL-ESIN--CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWM 181
Query: 475 APEYLSTGQSSEKTDVFGFGVLLLELITGQK 505
+PE ++ + + +DV+ F V + E+++ K
Sbjct: 182 SPESINFRRFTTASDVWMFAVCMWEILSFGK 212
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 101/211 (47%), Gaps = 12/211 (5%)
Query: 300 IATGNFSPKNILGQGGYGVVYKGCLPN----RMVVAVKRLK-DPNFTGEVQFQTEVEMIG 354
IA + ILG+G +G VY+G N ++ VAVK K D + +F +E ++
Sbjct: 5 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 64
Query: 355 LALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTAR 414
H ++++L G + E ++ P G + L + + L + +L +
Sbjct: 65 NLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVL---TLVLYSLQICK 120
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHI 474
+ YL E N +HRD+ NIL+ +GDFGL++ ++ D + + R + +
Sbjct: 121 AMAYL-ESIN--CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWM 177
Query: 475 APEYLSTGQSSEKTDVFGFGVLLLELITGQK 505
+PE ++ + + +DV+ F V + E+++ K
Sbjct: 178 SPESINFRRFTTASDVWMFAVCMWEILSFGK 208
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 101/211 (47%), Gaps = 12/211 (5%)
Query: 300 IATGNFSPKNILGQGGYGVVYKGCLPN----RMVVAVKRLK-DPNFTGEVQFQTEVEMIG 354
IA + ILG+G +G VY+G N ++ VAVK K D + +F +E ++
Sbjct: 21 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 80
Query: 355 LALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTAR 414
H ++++L G + E ++ P G + L + + L + +L +
Sbjct: 81 NLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVL---TLVLYSLQICK 136
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHI 474
+ YL E N +HRD+ NIL+ +GDFGL++ ++ D + + R + +
Sbjct: 137 AMAYL-ESIN--CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWM 193
Query: 475 APEYLSTGQSSEKTDVFGFGVLLLELITGQK 505
+PE ++ + + +DV+ F V + E+++ K
Sbjct: 194 SPESINFRRFTTASDVWMFAVCMWEILSFGK 224
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 25/208 (12%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMT 370
+G+G YG V++G L + VAVK + + +TE+ L H N+L MT
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFR-ETEIYNTVLLRHDNILGFIASDMT 73
Query: 371 PE----ERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLH-----E 421
+ L+ Y +GS+ D L+ RQ P + + +A+ A GL +LH
Sbjct: 74 SRNSSTQLWLITHYHEHGSLYDFLQ--RQTLEP---HLALRLAVSAACGLAHLHVEIFGT 128
Query: 422 QCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVG---HIAPEY 478
Q P I HRD K+ N+L+ + + + D GLA + + ++ VG ++APE
Sbjct: 129 QGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEV 188
Query: 479 LSTG------QSSEKTDVFGFGVLLLEL 500
L +S + TD++ FG++L E+
Sbjct: 189 LDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 92/197 (46%), Gaps = 21/197 (10%)
Query: 311 LGQGGYGVV----YKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYG 366
+G+G +G V Y+G N+ VAVK +K N F E ++ H NL++L G
Sbjct: 20 IGKGEFGDVMLGDYRG---NK--VAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLG 72
Query: 367 FCMTPEERL-LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNP 425
+ + L +V YM GS+ D LR + + L + + +L + YL
Sbjct: 73 VIVEEKGGLYIVTEYMAKGSLVDYLRS--RGRSVLGGDCLLKFSLDVCEAMEYLE---GN 127
Query: 426 KIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSS 485
+HRD+ A N+L+ E A V DFGL K V+ T APE L S
Sbjct: 128 NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREAAFS 183
Query: 486 EKTDVFGFGVLLLELIT 502
K+DV+ FG+LL E+ +
Sbjct: 184 TKSDVWSFGILLWEIYS 200
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 124/284 (43%), Gaps = 39/284 (13%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMT 370
+G+G YG V++G V AVK + + +TE+ + H N+L MT
Sbjct: 16 VGKGRYGEVWRGSWQGENV-AVKIFSSRDEKSWFR-ETELYNTVMLRHENILGFIASDMT 73
Query: 371 PE----ERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLH-----E 421
+ L+ Y GS+ D L+ T LD + I L A GL +LH
Sbjct: 74 SRHSSTQLWLITHYHEMGSLYDYLQLT-----TLDTVSCLRIVLSIASGLAHLHIEIFGT 128
Query: 422 QCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVG---HIAPEY 478
Q P I HRD+K+ NIL+ ++ + + D GLA + + + + VG ++APE
Sbjct: 129 QGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEV 188
Query: 479 LSTG------QSSEKTDVFGFGVLLLELITGQKALDVGNGQVQ--KGMILDCVRT--LHE 528
L S ++ D++ FG++L E+ V NG V+ K D V E
Sbjct: 189 LDETIQVDCFDSYKRVDIWAFGLVLWEVARRM----VSNGIVEDYKPPFYDVVPNDPSFE 244
Query: 529 ERRLDVLIDRDL-----KGSFDPTELEKMVQLALQCTQSHPNLR 567
+ R V +D+ + DPT L + +L +C +P+ R
Sbjct: 245 DMRKVVCVDQQRPNIPNRWFSDPT-LTSLAKLMKECWYQNPSAR 287
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 22/211 (10%)
Query: 311 LGQGGYGVVYK------GCLPNRMVVAVKRLKDPNFTGEVQ-FQTEVEMIG-LALHRNLL 362
LG G +G V + G + VAVK LK E + +E++++ L H N++
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 363 RLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQ----------AKPPLDWNRRMHIALGT 412
L G C L++ Y G + + LR + A L +H +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQV 173
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAK-LLDRRDSHVTTAVRGTV 471
A+G+ +L + IHRDV A N+LL A +GDFGLA+ +++ + V R V
Sbjct: 174 AQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 230
Query: 472 GHIAPEYLSTGQSSEKTDVFGFGVLLLELIT 502
+APE + + ++DV+ +G+LL E+ +
Sbjct: 231 KWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 124/284 (43%), Gaps = 39/284 (13%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMT 370
+G+G YG V++G V AVK + + +TE+ + H N+L MT
Sbjct: 16 VGKGRYGEVWRGSWQGENV-AVKIFSSRDEKSWFR-ETELYNTVMLRHENILGFIASDMT 73
Query: 371 PE----ERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLH-----E 421
+ L+ Y GS+ D L+ T LD + I L A GL +LH
Sbjct: 74 SRHSSTQLWLITHYHEMGSLYDYLQLT-----TLDTVSCLRIVLSIASGLAHLHIEIFGT 128
Query: 422 QCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVG---HIAPEY 478
Q P I HRD+K+ NIL+ ++ + + D GLA + + + + VG ++APE
Sbjct: 129 QGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEV 188
Query: 479 LSTG------QSSEKTDVFGFGVLLLELITGQKALDVGNGQVQ--KGMILDCVRT--LHE 528
L S ++ D++ FG++L E+ V NG V+ K D V E
Sbjct: 189 LDETIQVDCFDSYKRVDIWAFGLVLWEVARRM----VSNGIVEDYKPPFYDVVPNDPSFE 244
Query: 529 ERRLDVLIDRDL-----KGSFDPTELEKMVQLALQCTQSHPNLR 567
+ R V +D+ + DPT L + +L +C +P+ R
Sbjct: 245 DMRKVVCVDQQRPNIPNRWFSDPT-LTSLAKLMKECWYQNPSAR 287
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 93/197 (47%), Gaps = 21/197 (10%)
Query: 311 LGQGGYGVV----YKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYG 366
+G+G +G V Y+G N+ VAVK +K N F E ++ H NL++L G
Sbjct: 201 IGKGEFGDVMLGDYRG---NK--VAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLG 253
Query: 367 FCMTPEERL-LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNP 425
+ + L +V YM GS+ D LR + + L + + +L + YL
Sbjct: 254 VIVEEKGGLYIVTEYMAKGSLVDYLRS--RGRSVLGGDCLLKFSLDVCEAMEYLE---GN 308
Query: 426 KIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSS 485
+HRD+ A N+L+ E A V DFGL K V+ T APE L + S
Sbjct: 309 NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREKKFS 364
Query: 486 EKTDVFGFGVLLLELIT 502
K+DV+ FG+LL E+ +
Sbjct: 365 TKSDVWSFGILLWEIYS 381
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 13/213 (6%)
Query: 297 ELQIATGNFSPKNILGQGGYGVVYKGCLPN-RMVVAVKRLKDPNFTGEVQFQ-TEVEMIG 354
++++ +F +LG+G +G V+ A+K LK + + T VE
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 355 LAL---HRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALG 411
L+L H L ++ T E V Y+ G + ++ + D +R A
Sbjct: 71 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK----FDLSRATFYAAE 126
Query: 412 TARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTV 471
GL +LH + I++RD+K NILLD+ + DFG+ K D+ T GT
Sbjct: 127 IILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK-TNXFCGTP 182
Query: 472 GHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQ 504
+IAPE L + + D + FGVLL E++ GQ
Sbjct: 183 DYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 215
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 91/197 (46%), Gaps = 8/197 (4%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQ---TEVEMIGLALHRNLLRLYGF 367
+G G YG K + + V + D E + Q +EV ++ H N++R Y
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 368 CM--TPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCN- 424
+ T +V Y G +A + + + LD + + L H + +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 425 -PKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQ 483
++HRD+K AN+ LD +GDFGLA++L+ D+ A GT +++PE ++
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN-HDTSFAKAFVGTPYYMSPEQMNRMS 192
Query: 484 SSEKTDVFGFGVLLLEL 500
+EK+D++ G LL EL
Sbjct: 193 YNEKSDIWSLGCLLYEL 209
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 93/196 (47%), Gaps = 12/196 (6%)
Query: 311 LGQGGYGVVYKGCLPNR-MVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCM 369
LG+G YG VYK +VA+K++ P + + E+ ++ ++++ YG
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQV--PVESDLQEIIKEISIMQQCDSPHVVKYYGSYF 94
Query: 370 TPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIH 429
+ +V Y GSV+D +R + L + I T +GL YLH + IH
Sbjct: 95 KNTDLWIVMEYCGAGSVSDIIRLRNKT---LTEDEIATILQSTLKGLEYLHFM---RKIH 148
Query: 430 RDVKAANILLDESFEAVVGDFGLA-KLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKT 488
RD+KA NILL+ A + DFG+A +L D V GT +APE + +
Sbjct: 149 RDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKR--NXVIGTPFWMAPEVIQEIGYNCVA 206
Query: 489 DVFGFGVLLLELITGQ 504
D++ G+ +E+ G+
Sbjct: 207 DIWSLGITAIEMAEGK 222
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 8/197 (4%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQ---TEVEMIGLALHRNLLRLYGF 367
+G G YG K + + V + D E + Q +EV ++ H N++R Y
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 368 CM--TPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCN- 424
+ T +V Y G +A + + + LD + + L H + +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 425 -PKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQ 483
++HRD+K AN+ LD +GDFGLA++L+ S T V GT +++PE ++
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV-GTPYYMSPEQMNRMS 192
Query: 484 SSEKTDVFGFGVLLLEL 500
+EK+D++ G LL EL
Sbjct: 193 YNEKSDIWSLGCLLYEL 209
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 15/219 (6%)
Query: 299 QIATGNFSPKNILGQGGYGVVYKGCLPNR-MVVAVKRLKDPNFTGEVQFQ---TEVEMIG 354
++ NF +LG+G +G V + + AVK LK + + TE ++
Sbjct: 19 RLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILS 78
Query: 355 LAL-HRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTA 413
LA H L +L+ TP+ V ++ G + ++ +R+ D R A
Sbjct: 79 LARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRR----FDEARARFYAAEII 134
Query: 414 RGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVR-GTVG 472
L++LH++ II+RD+K N+LLD + DFG+ K + + VTTA GT
Sbjct: 135 SALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCK--EGICNGVTTATFCGTPD 189
Query: 473 HIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGN 511
+IAPE L D + GVLL E++ G + N
Sbjct: 190 YIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAEN 228
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 113/228 (49%), Gaps = 13/228 (5%)
Query: 299 QIATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQT--EVEMIGLA 356
++ +F + LG G GVV+K +V ++L ++ Q E++++
Sbjct: 21 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 80
Query: 357 LHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGL 416
++ YG + E + +M GS+ L+ + + P ++ IA+ +GL
Sbjct: 81 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK--KAGRIPEQILGKVSIAV--IKGL 136
Query: 417 LYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLA-KLLDRRDSHVTTAVRGTVGHIA 475
YL E+ KI+HRDVK +NIL++ E + DFG++ +L+D + + GT +++
Sbjct: 137 TYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMS 190
Query: 476 PEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCV 523
PE L S ++D++ G+ L+E+ G+ + G+G + +LD +
Sbjct: 191 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYI 238
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 99/208 (47%), Gaps = 18/208 (8%)
Query: 311 LGQGGYGVVYKGC--LPNRMVVAVKRLKDPNFTGE--VQFQTEVEMIGLALHRNLLRLYG 366
+G GG+ V C L MV ++ D N G + +TE+E + H+++ +LY
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAI--KIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYH 75
Query: 367 FCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPK 426
T + +V Y P G + D + Q + + R + + +A + Y+H Q
Sbjct: 76 VLETANKIFMVLEYCPGGELFDYI--ISQDRLSEEETRVVFRQIVSA--VAYVHSQ---G 128
Query: 427 IIHRDVKAANILLDESFEAVVGDFGL-AKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQS- 484
HRD+K N+L DE + + DFGL AK +D H+ T G++ + APE L G+S
Sbjct: 129 YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCC-GSLAYAAPE-LIQGKSY 186
Query: 485 -SEKTDVFGFGVLLLELITGQKALDVGN 511
+ DV+ G+LL L+ G D N
Sbjct: 187 LGSEADVWSMGILLYVLMCGFLPFDDDN 214
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 311 LGQGGYGVVYK------GCLPNRMVVAVKRLKDPNFTGEVQ-FQTEVEMIG-LALHRNLL 362
LG G +G V + G + VAVK LK E + +E++++ L H N++
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 363 RLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTA--RGLLYLH 420
L G C L++ Y G + + LR + L+ + IA TA R LL+
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRV---LETDPAFAIANSTASTRDLLHFS 170
Query: 421 EQ--------CNPKIIHRDVKAANILLDESFEAVVGDFGLAK-LLDRRDSHVTTAVRGTV 471
Q + IHRDV A N+LL A +GDFGLA+ +++ + V R V
Sbjct: 171 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 230
Query: 472 GHIAPEYLSTGQSSEKTDVFGFGVLLLELIT 502
+APE + + ++DV+ +G+LL E+ +
Sbjct: 231 KWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 94/214 (43%), Gaps = 14/214 (6%)
Query: 304 NFSPKNILGQGGYG-VVYKGCLPNRMVVAVKRLKDPNFTGE--VQFQT-EVEMIGLALHR 359
+F ILG+G + VV L A+K L+ + E V + T E +++ H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 360 NLLRLYGFCMTPEERLLV-YPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++LY F +E+L Y NG + +R D L Y
Sbjct: 93 FFVKLY-FTFQDDEKLYFGLSYAKNGCLLKYIRKIGS----FDETCTRFYTAEIVSALEY 147
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV-TTAVRGTVGHIAPE 477
LH + IIHRD+K NILL+E + DFG AK+L + GT +++PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 204
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGN 511
L+ +S+ +D++ G ++ +L+ G GN
Sbjct: 205 LLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGN 238
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 103/218 (47%), Gaps = 20/218 (9%)
Query: 299 QIATGNFSPKNILGQGGYGVVYKG---CLPNRMVVAV---KRLKDPNFTGEVQFQTEVEM 352
++ G++ + LG G +G V G +++ V + ++++ + G+++ E++
Sbjct: 12 RVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIR--REIQN 69
Query: 353 IGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCL-RDTRQAKPPLDWNRRMHIALG 411
+ L H ++++LY TP + +V Y+ G + D + ++ R LD +
Sbjct: 70 LKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGR-----LDEKESRRLFQQ 124
Query: 412 TARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTV 471
G+ Y H ++HRD+K N+LLD A + DFGL+ ++ D G+
Sbjct: 125 ILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMS--DGEFLRXSCGSP 179
Query: 472 GHIAPEYLSTG-QSSEKTDVFGFGVLLLELITGQKALD 508
+ APE +S + + D++ GV+L L+ G D
Sbjct: 180 NYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFD 217
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 93/214 (43%), Gaps = 14/214 (6%)
Query: 304 NFSPKNILGQGGYG-VVYKGCLPNRMVVAVKRLKDPNFTGE--VQFQT-EVEMIGLALHR 359
+F ILG+G + VV L A+K L+ + E V + T E +++ H
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 360 NLLRLYGFCMTPEERLLV-YPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++LY F +E+L Y NG + +R D L Y
Sbjct: 91 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 145
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV-TTAVRGTVGHIAPE 477
LH + IIHRD+K NILL+E + DFG AK+L A GT +++PE
Sbjct: 146 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPE 202
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGN 511
L+ + + +D++ G ++ +L+ G GN
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 236
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 15/212 (7%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEV----QFQTEVEMIGLALHRNLLRLYG 366
LG+G YG V NR+ +K + V + E+ + + H N+++ YG
Sbjct: 14 LGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 71
Query: 367 FCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPK 426
+ L Y G + D + + P D R H + G++YLH
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMA---GVVYLH---GIG 124
Query: 427 IIHRDVKAANILLDESFEAVVGDFGLAKLLDRRD-SHVTTAVRGTVGHIAPEYLSTGQ-S 484
I HRD+K N+LLDE + DFGLA + + + + GT+ ++APE L +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 485 SEKTDVFGFGVLLLELITGQKALDVGNGQVQK 516
+E DV+ G++L ++ G+ D + Q+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 106/224 (47%), Gaps = 19/224 (8%)
Query: 311 LGQGGYGVVYKGCLPNR---MVVAVKRLKDPNFTGEVQ-FQTEVEMIGLALHRNLLRLYG 366
LG G +G V +G R + VA+K LK + + E +++ + ++RL G
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 367 FCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPK 426
C E +LV G + L R+ P + +H + G+ YL E+
Sbjct: 404 VCQA-EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLH---QVSMGMKYLEEK---N 456
Query: 427 IIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVT--TAVRGTVGHIAPEYLSTGQS 484
+HR++ A N+LL A + DFGL+K L DS+ T +A + + APE ++ +
Sbjct: 457 FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKF 516
Query: 485 SEKTDVFGFGVLLLELIT-GQKALDVGNGQ-----VQKGMILDC 522
S ++DV+ +GV + E ++ GQK G +++G ++C
Sbjct: 517 SSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMEC 560
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 15/212 (7%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEV----QFQTEVEMIGLALHRNLLRLYG 366
LG+G YG V NR+ +K + V + E+ + + H N+++ YG
Sbjct: 15 LGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 72
Query: 367 FCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPK 426
+ L Y G + D + + P D R H + G++YLH
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMA---GVVYLH---GIG 125
Query: 427 IIHRDVKAANILLDESFEAVVGDFGLAKLLDRRD-SHVTTAVRGTVGHIAPEYLSTGQ-S 484
I HRD+K N+LLDE + DFGLA + + + + GT+ ++APE L +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 185
Query: 485 SEKTDVFGFGVLLLELITGQKALDVGNGQVQK 516
+E DV+ G++L ++ G+ D + Q+
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 119/273 (43%), Gaps = 41/273 (15%)
Query: 267 HWYRSRLLFTSYVQ-------QDYEFDVGHLKRFSFR-ELQIATGNFSPKNILGQGGYGV 318
H Y+ + + S +Q D E+ + + + + + N +LG G +G
Sbjct: 1 HKYKKQFRYESQLQMVQVTGSSDNEYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGK 60
Query: 319 VYKGCLPN------RMVVAVKRLKDPNFTGEVQ-FQTEVEMIG-LALHRNLLRLYGFCMT 370
V + VAVK LK+ + E + +E++M+ L H N++ L G C
Sbjct: 61 VMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTL 120
Query: 371 PEERLLVYPYMPNGSVADCLRDTRQ--AKPPLDWNRRMHI-----------------ALG 411
L++ Y G + + LR R+ ++ +++ + + A
Sbjct: 121 SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQ 180
Query: 412 TARGLLYLH-EQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTA-VRG 469
A+G+ +L + C +HRD+ A N+L+ + DFGLA+ + ++V R
Sbjct: 181 VAKGMEFLEFKSC----VHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARL 236
Query: 470 TVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT 502
V +APE L G + K+DV+ +G+LL E+ +
Sbjct: 237 PVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 101/214 (47%), Gaps = 26/214 (12%)
Query: 302 TGNFSPKN---ILGQ-GGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQ-FQTEVEMIGLA 356
T + +P++ I+G+ G +G VYK V+A ++ D E++ + E++++
Sbjct: 5 TRDLNPEDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASC 64
Query: 357 LHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGL 416
H N+++L ++ + G+V + + + PL ++ + T L
Sbjct: 65 DHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELER---PLTESQIQVVCKQTLDAL 121
Query: 417 LYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAK-----LLDRRDSHVTTAVRGTV 471
YLH+ KIIHRD+KA NIL + + DFG++ + RRDS + GT
Sbjct: 122 NYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFI-----GTP 173
Query: 472 GHIAPEYLSTGQSSE-----KTDVFGFGVLLLEL 500
+APE + S + K DV+ G+ L+E+
Sbjct: 174 YWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 93/214 (43%), Gaps = 14/214 (6%)
Query: 304 NFSPKNILGQGGYG-VVYKGCLPNRMVVAVKRLKDPNFTGE--VQFQT-EVEMIGLALHR 359
+F ILG+G + VV L A+K L+ + E V + T E +++ H
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 93
Query: 360 NLLRLYGFCMTPEERLLV-YPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++LY F +E+L Y NG + +R D L Y
Sbjct: 94 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 148
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV-TTAVRGTVGHIAPE 477
LH + IIHRD+K NILL+E + DFG AK+L + GT +++PE
Sbjct: 149 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 205
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGN 511
L+ + + +D++ G ++ +L+ G GN
Sbjct: 206 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 239
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 15/212 (7%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEV----QFQTEVEMIGLALHRNLLRLYG 366
LG+G YG V NR+ +K + V + E+ + + H N+++ YG
Sbjct: 14 LGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 71
Query: 367 FCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPK 426
+ L Y G + D + + P D R H + G++YLH
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMA---GVVYLH---GIG 124
Query: 427 IIHRDVKAANILLDESFEAVVGDFGLAKLLDRRD-SHVTTAVRGTVGHIAPEYLSTGQ-S 484
I HRD+K N+LLDE + DFGLA + + + + GT+ ++APE L +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 485 SEKTDVFGFGVLLLELITGQKALDVGNGQVQK 516
+E DV+ G++L ++ G+ D + Q+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 15/212 (7%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQ----FQTEVEMIGLALHRNLLRLYG 366
LG+G YG V NR+ +K + V + E+ + + H N+++ YG
Sbjct: 14 LGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 367 FCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPK 426
+ L Y G + D + + P D R H + G++YLH
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMA---GVVYLH---GIG 124
Query: 427 IIHRDVKAANILLDESFEAVVGDFGLAKLLDRRD-SHVTTAVRGTVGHIAPEYLSTGQ-S 484
I HRD+K N+LLDE + DFGLA + + + + GT+ ++APE L +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 485 SEKTDVFGFGVLLLELITGQKALDVGNGQVQK 516
+E DV+ G++L ++ G+ D + Q+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 15/212 (7%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEV----QFQTEVEMIGLALHRNLLRLYG 366
LG+G YG V NR+ +K + V + E+ + + H N+++ YG
Sbjct: 15 LGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYG 72
Query: 367 FCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPK 426
+ L Y G + D + + P D R H + G++YLH
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMA---GVVYLH---GIG 125
Query: 427 IIHRDVKAANILLDESFEAVVGDFGLAKLLDRRD-SHVTTAVRGTVGHIAPEYLSTGQ-S 484
I HRD+K N+LLDE + DFGLA + + + + GT+ ++APE L +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 485 SEKTDVFGFGVLLLELITGQKALDVGNGQVQK 516
+E DV+ G++L ++ G+ D + Q+
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 14/214 (6%)
Query: 304 NFSPKNILGQGGYG-VVYKGCLPNRMVVAVKRLKDPNFTGE--VQFQT-EVEMIGLALHR 359
+F ILG+G + VV L A+K L+ + E V + T E +++ H
Sbjct: 30 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 89
Query: 360 NLLRLYGFCMTPEERLLV-YPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++LY F +E+L Y NG + L+ R+ + R + A L Y
Sbjct: 90 FFVKLY-FTFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFDETCTRFYTA-EIVSALEY 144
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV-TTAVRGTVGHIAPE 477
LH + IIHRD+K NILL+E + DFG AK+L + GT +++PE
Sbjct: 145 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 201
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGN 511
L+ + + +D++ G ++ +L+ G GN
Sbjct: 202 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 235
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 15/212 (7%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEV----QFQTEVEMIGLALHRNLLRLYG 366
LG+G YG V NR+ +K + V + E+ + + H N+++ YG
Sbjct: 14 LGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 367 FCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPK 426
+ L Y G + D + + P D R H + G++YLH
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMA---GVVYLH---GIG 124
Query: 427 IIHRDVKAANILLDESFEAVVGDFGLAKLLDRRD-SHVTTAVRGTVGHIAPEYLSTGQ-S 484
I HRD+K N+LLDE + DFGLA + + + + GT+ ++APE L +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 485 SEKTDVFGFGVLLLELITGQKALDVGNGQVQK 516
+E DV+ G++L ++ G+ D + Q+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 15/212 (7%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEV----QFQTEVEMIGLALHRNLLRLYG 366
LG+G YG V NR+ +K + V + E+ + + H N+++ YG
Sbjct: 14 LGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 367 FCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPK 426
+ L Y G + D + + P D R H + G++YLH
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMA---GVVYLH---GIG 124
Query: 427 IIHRDVKAANILLDESFEAVVGDFGLAKLLDRRD-SHVTTAVRGTVGHIAPEYLSTGQ-S 484
I HRD+K N+LLDE + DFGLA + + + + GT+ ++APE L +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 485 SEKTDVFGFGVLLLELITGQKALDVGNGQVQK 516
+E DV+ G++L ++ G+ D + Q+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQPSDSXQE 216
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 89/197 (45%), Gaps = 8/197 (4%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQ---TEVEMIGLALHRNLLRLYGF 367
+G G YG K + + V + D E + Q +EV ++ H N++R Y
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 368 CM--TPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCN- 424
+ T +V Y G +A + + + LD + + L H + +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 425 -PKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQ 483
++HRD+K AN+ LD +GDFGLA++L+ D GT +++PE ++
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN-HDEDFAKEFVGTPYYMSPEQMNRMS 192
Query: 484 SSEKTDVFGFGVLLLEL 500
+EK+D++ G LL EL
Sbjct: 193 YNEKSDIWSLGCLLYEL 209
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHI 474
G YLH ++IHRD+K N+ L+E E +GDFGLA ++ D + GT +I
Sbjct: 133 GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE-YDGERKKTLCGTPNYI 188
Query: 475 APEYLSTGQSSEKTDVFGFGVLLLELITGQKALD 508
APE LS S + DV+ G ++ L+ G+ +
Sbjct: 189 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 222
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 92/214 (42%), Gaps = 14/214 (6%)
Query: 304 NFSPKNILGQGGYG-VVYKGCLPNRMVVAVKRLKDPNFTGE--VQFQT-EVEMIGLALHR 359
+F ILG+G + VV L A+K L+ + E V + T E +++ H
Sbjct: 36 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 95
Query: 360 NLLRLYGFCMTPEERLLV-YPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++LY F +E+L Y NG + +R D L Y
Sbjct: 96 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 150
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV-TTAVRGTVGHIAPE 477
LH + IIHRD+K NILL+E + DFG AK+L GT +++PE
Sbjct: 151 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 207
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGN 511
L+ + + +D++ G ++ +L+ G GN
Sbjct: 208 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 241
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHI 474
G YLH ++IHRD+K N+ L+E E +GDFGLA ++ D + GT +I
Sbjct: 153 GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE-YDGERKKVLCGTPNYI 208
Query: 475 APEYLSTGQSSEKTDVFGFGVLLLELITGQKALD 508
APE LS S + DV+ G ++ L+ G+ +
Sbjct: 209 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 242
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 99/219 (45%), Gaps = 27/219 (12%)
Query: 311 LGQGGYGVV--YKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFC 368
LG+GG+ V +G L + A+KR+ + Q E +M L H N+LRL +C
Sbjct: 37 LGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYC 95
Query: 369 M----TPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCN 424
+ E L+ P+ G++ + + + L ++ + + LG RGL +H +
Sbjct: 96 LRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK-- 153
Query: 425 PKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVT-----------TAVRGTVGH 473
HRD+K NILL + + V+ D G +++ HV A R T+ +
Sbjct: 154 -GYAHRDLKPTNILLGDEGQPVLMDLG---SMNQACIHVEGSRQALTLQDWAAQRCTISY 209
Query: 474 IAPEYLSTGQS---SEKTDVFGFGVLLLELITGQKALDV 509
APE S E+TDV+ G +L ++ G+ D+
Sbjct: 210 RAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDM 248
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHI 474
G YLH ++IHRD+K N+ L+E E +GDFGLA ++ D + GT +I
Sbjct: 129 GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE-YDGERKKTLCGTPNYI 184
Query: 475 APEYLSTGQSSEKTDVFGFGVLLLELITGQKALD 508
APE LS S + DV+ G ++ L+ G+ +
Sbjct: 185 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHI 474
G YLH ++IHRD+K N+ L+E E +GDFGLA ++ D + GT +I
Sbjct: 129 GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE-YDGERKKTLCGTPNYI 184
Query: 475 APEYLSTGQSSEKTDVFGFGVLLLELITGQKALD 508
APE LS S + DV+ G ++ L+ G+ +
Sbjct: 185 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHI 474
G YLH ++IHRD+K N+ L+E E +GDFGLA ++ D + GT +I
Sbjct: 151 GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE-YDGERKKVLCGTPNYI 206
Query: 475 APEYLSTGQSSEKTDVFGFGVLLLELITGQKALD 508
APE LS S + DV+ G ++ L+ G+ +
Sbjct: 207 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 240
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 92/214 (42%), Gaps = 14/214 (6%)
Query: 304 NFSPKNILGQGGYG-VVYKGCLPNRMVVAVKRLKDPNFTGE--VQFQT-EVEMIGLALHR 359
+F ILG+G + VV L A+K L+ + E V + T E +++ H
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 360 NLLRLYGFCMTPEERLLV-YPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++LY F +E+L Y NG + +R D L Y
Sbjct: 91 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 145
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV-TTAVRGTVGHIAPE 477
LH + IIHRD+K NILL+E + DFG AK+L GT +++PE
Sbjct: 146 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGN 511
L+ + + +D++ G ++ +L+ G GN
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 236
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 92/214 (42%), Gaps = 14/214 (6%)
Query: 304 NFSPKNILGQGGYG-VVYKGCLPNRMVVAVKRLKDPNFTGE--VQFQT-EVEMIGLALHR 359
+F ILG+G + VV L A+K L+ + E V + T E +++ H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 360 NLLRLYGFCMTPEERLLV-YPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++LY F +E+L Y NG + +R D L Y
Sbjct: 93 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 147
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV-TTAVRGTVGHIAPE 477
LH + IIHRD+K NILL+E + DFG AK+L GT +++PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGN 511
L+ + + +D++ G ++ +L+ G GN
Sbjct: 205 LLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAGN 238
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 15/212 (7%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEV----QFQTEVEMIGLALHRNLLRLYG 366
LG+G YG V NR+ +K + V + E+ + + H N+++ YG
Sbjct: 15 LGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 367 FCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPK 426
+ L Y G + D + + P D R H + G++YLH
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMA---GVVYLH---GIG 125
Query: 427 IIHRDVKAANILLDESFEAVVGDFGLAKLLDRRD-SHVTTAVRGTVGHIAPEYLSTGQ-S 484
I HRD+K N+LLDE + DFGLA + + + + GT+ ++APE L +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 485 SEKTDVFGFGVLLLELITGQKALDVGNGQVQK 516
+E DV+ G++L ++ G+ D + Q+
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 92/214 (42%), Gaps = 14/214 (6%)
Query: 304 NFSPKNILGQGGYG-VVYKGCLPNRMVVAVKRLKDPNFTGE--VQFQT-EVEMIGLALHR 359
+F ILG+G + VV L A+K L+ + E V + T E +++ H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 360 NLLRLYGFCMTPEERLLV-YPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++LY F +E+L Y NG + +R D L Y
Sbjct: 93 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 147
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV-TTAVRGTVGHIAPE 477
LH + IIHRD+K NILL+E + DFG AK+L GT +++PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGN 511
L+ + + +D++ G ++ +L+ G GN
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 238
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 105/228 (46%), Gaps = 41/228 (17%)
Query: 304 NFSPKNILGQGGYGVVYKGCLPNRM---VVAVKRLKDPNFTGEVQFQTEVEMIGLALHRN 360
+F ++G GG+G V+K +R+ ++R+K N E EV+ + H N
Sbjct: 13 DFKEIELIGSGGFGQVFKA--KHRIDGKTYVIRRVKYNNEKAE----REVKALAKLDHVN 66
Query: 361 LLRLYG----FCMTPE---ERLLVYPYMPNGS--------------VADCLRDT------ 393
++ G F PE + L Y P S + C + T
Sbjct: 67 IVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIE 126
Query: 394 RQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLA 453
++ LD + + +G+ Y+H + K+IHRD+K +NI L ++ + +GDFGL
Sbjct: 127 KRRGEKLDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDFGLV 183
Query: 454 KLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELI 501
L ++ T +GT+ +++PE +S+ ++ D++ G++L EL+
Sbjct: 184 TSL--KNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 92/214 (42%), Gaps = 14/214 (6%)
Query: 304 NFSPKNILGQGGYG-VVYKGCLPNRMVVAVKRLKDPNFTGE--VQFQT-EVEMIGLALHR 359
+F ILG+G + VV L A+K L+ + E V + T E +++ H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 360 NLLRLYGFCMTPEERLLV-YPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++LY F +E+L Y NG + +R D L Y
Sbjct: 93 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 147
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV-TTAVRGTVGHIAPE 477
LH + IIHRD+K NILL+E + DFG AK+L GT +++PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGN 511
L+ + + +D++ G ++ +L+ G GN
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 238
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 92/214 (42%), Gaps = 14/214 (6%)
Query: 304 NFSPKNILGQGGYG-VVYKGCLPNRMVVAVKRLKDPNFTGE--VQFQT-EVEMIGLALHR 359
+F ILG+G + VV L A+K L+ + E V + T E +++ H
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 360 NLLRLYGFCMTPEERLLV-YPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++LY F +E+L Y NG + +R D L Y
Sbjct: 91 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 145
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV-TTAVRGTVGHIAPE 477
LH + IIHRD+K NILL+E + DFG AK+L GT +++PE
Sbjct: 146 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGN 511
L+ + + +D++ G ++ +L+ G GN
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 236
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 92/214 (42%), Gaps = 14/214 (6%)
Query: 304 NFSPKNILGQGGYG-VVYKGCLPNRMVVAVKRLKDPNFTGE--VQFQT-EVEMIGLALHR 359
+F ILG+G + VV L A+K L+ + E V + T E +++ H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 360 NLLRLYGFCMTPEERLLV-YPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++LY F +E+L Y NG + +R D L Y
Sbjct: 93 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 147
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV-TTAVRGTVGHIAPE 477
LH + IIHRD+K NILL+E + DFG AK+L GT +++PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGN 511
L+ + + +D++ G ++ +L+ G GN
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 238
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 92/214 (42%), Gaps = 14/214 (6%)
Query: 304 NFSPKNILGQGGYG-VVYKGCLPNRMVVAVKRLKDPNFTGE--VQFQT-EVEMIGLALHR 359
+F ILG+G + VV L A+K L+ + E V + T E +++ H
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 93
Query: 360 NLLRLYGFCMTPEERLLV-YPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++LY F +E+L Y NG + +R D L Y
Sbjct: 94 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 148
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV-TTAVRGTVGHIAPE 477
LH + IIHRD+K NILL+E + DFG AK+L GT +++PE
Sbjct: 149 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 205
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGN 511
L+ + + +D++ G ++ +L+ G GN
Sbjct: 206 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 239
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 103/217 (47%), Gaps = 18/217 (8%)
Query: 299 QIATGNFSPKNILGQGGYGVVYKG---CLPNRMVVAV---KRLKDPNFTGEVQFQTEVEM 352
++ G++ + LG G +G V G +++ V + ++++ + G+++ E++
Sbjct: 7 RVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIK--REIQN 64
Query: 353 IGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGT 412
+ L H ++++LY TP + +V Y+ G + D + + + RR+ + +
Sbjct: 65 LKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYI--CKHGRVEEMEARRLFQQILS 122
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVG 472
A + H ++HRD+K N+LLD A + DFGL+ ++ D G+
Sbjct: 123 AVDYCHRH-----MVVHRDLKPENVLLDAHMNAKIADFGLSNMMS--DGEFLRTSCGSPN 175
Query: 473 HIAPEYLSTG-QSSEKTDVFGFGVLLLELITGQKALD 508
+ APE +S + + D++ GV+L L+ G D
Sbjct: 176 YAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 94/214 (43%), Gaps = 37/214 (17%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQF---QTEVEMIGLALHRNLLRLYGF 367
+G+G YG V+ G V AVK FT E +TE+ L H N+L GF
Sbjct: 45 IGKGRYGEVWMGKWRGEKV-AVKVF----FTTEEASWFRETEIYQTVLMRHENIL---GF 96
Query: 368 CMTP-------EERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLH 420
+ L+ Y NGS+ D L+ T LD + +A + GL +LH
Sbjct: 97 IAADIKGTGSWTQLYLITDYHENGSLYDYLKST-----TLDAKSMLKLAYSSVSGLCHLH 151
Query: 421 E-----QCNPKIIHRDVKAANILLDESFEAVVGDFGLAK--LLDRRDSHVTTAVR-GTVG 472
Q P I HRD+K+ NIL+ ++ + D GLA + D + + R GT
Sbjct: 152 TEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKR 211
Query: 473 HIAPEYLSTG------QSSEKTDVFGFGVLLLEL 500
++ PE L QS D++ FG++L E+
Sbjct: 212 YMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHI 474
G YLH ++IHRD+K N+ L+E E +GDFGLA ++ D + GT +I
Sbjct: 127 GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE-YDGERKKVLCGTPNYI 182
Query: 475 APEYLSTGQSSEKTDVFGFGVLLLELITGQKALD 508
APE LS S + DV+ G ++ L+ G+ +
Sbjct: 183 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 216
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 97/214 (45%), Gaps = 14/214 (6%)
Query: 304 NFSPKNILGQGGYG-VVYKGCLPNRMVVAVKRLKDPNFTGE--VQFQT-EVEMIGLALHR 359
+F ILG+G + VV L A+K L+ + E V + T E +++ H
Sbjct: 15 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 74
Query: 360 NLLRLYGFCMTPEERLLV-YPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++LY F +E+L Y NG + L+ R+ + R + A L Y
Sbjct: 75 FFVKLY-FTFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFDETCTRFYTA-EIVSALEY 129
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV-TTAVRGTVGHIAPE 477
LH + IIHRD+K NILL+E + DFG AK+L GT +++PE
Sbjct: 130 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 186
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGN 511
L+ + + +D++ G ++ +L+ G GN
Sbjct: 187 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 220
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 92/214 (42%), Gaps = 14/214 (6%)
Query: 304 NFSPKNILGQGGYG-VVYKGCLPNRMVVAVKRLKDPNFTGE--VQFQT-EVEMIGLALHR 359
+F ILG+G + VV L A+K L+ + E V + T E +++ H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 360 NLLRLYGFCMTPEERLLV-YPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++LY F +E+L Y NG + +R D L Y
Sbjct: 93 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 147
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV-TTAVRGTVGHIAPE 477
LH + IIHRD+K NILL+E + DFG AK+L GT +++PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGN 511
L+ + + +D++ G ++ +L+ G GN
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 238
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 15/212 (7%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEV----QFQTEVEMIGLALHRNLLRLYG 366
LG+G YG V NR+ +K + V + E+ + + H N+++ YG
Sbjct: 14 LGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 367 FCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPK 426
+ L Y G + D + + P D R H + G++YLH
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMA---GVVYLH---GIG 124
Query: 427 IIHRDVKAANILLDESFEAVVGDFGLAKLLDRRD-SHVTTAVRGTVGHIAPEYLSTGQ-S 484
I HRD+K N+LLDE + DFGLA + + + + GT+ ++APE L +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 485 SEKTDVFGFGVLLLELITGQKALDVGNGQVQK 516
+E DV+ G++L ++ G+ D + Q+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 97/214 (45%), Gaps = 14/214 (6%)
Query: 304 NFSPKNILGQGGYG-VVYKGCLPNRMVVAVKRLKDPNFTGE--VQFQT-EVEMIGLALHR 359
+F ILG+G + VV L A+K L+ + E V + T E +++ H
Sbjct: 30 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 89
Query: 360 NLLRLYGFCMTPEERLLV-YPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++LY F +E+L Y NG + L+ R+ + R + A L Y
Sbjct: 90 FFVKLY-FTFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFDETCTRFYTA-EIVSALEY 144
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV-TTAVRGTVGHIAPE 477
LH + IIHRD+K NILL+E + DFG AK+L GT +++PE
Sbjct: 145 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 201
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGN 511
L+ + + +D++ G ++ +L+ G GN
Sbjct: 202 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 235
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 311 LGQGGYGVVYKGCLPNRMV-VAVKRLKDPNFTG--EVQFQTEVEMIGLALHRNLLRLY-G 366
+G+G + VYKG V VA L+D T +F+ E E + H N++R Y
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 367 FCMTPEER---LLVYPYMPNGSVADCLRDTRQAKPPL--DWNRRMHIALGTARGLLYLHE 421
+ T + + +LV +G++ L+ + K + W R++ +GL +LH
Sbjct: 94 WESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI------LKGLQFLHT 147
Query: 422 QCNPKIIHRDVKAANILLDESFEAV-VGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLS 480
+ P IIHRD+K NI + +V +GD GLA L + + AV GT APE
Sbjct: 148 R-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL---KRASFAKAVIGTPEFXAPEXYE 203
Query: 481 TGQSSEKTDVFGFGVLLLELITGQ 504
+ E DV+ FG LE T +
Sbjct: 204 E-KYDESVDVYAFGXCXLEXATSE 226
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 15/212 (7%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEV----QFQTEVEMIGLALHRNLLRLYG 366
LG+G YG V NR+ +K + V + E+ + + H N+++ YG
Sbjct: 14 LGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 367 FCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPK 426
+ L Y G + D + + P D R H + G++YLH
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMA---GVVYLH---GIG 124
Query: 427 IIHRDVKAANILLDESFEAVVGDFGLAKLLDRRD-SHVTTAVRGTVGHIAPEYLSTGQ-S 484
I HRD+K N+LLDE + DFGLA + + + + GT+ ++APE L +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 485 SEKTDVFGFGVLLLELITGQKALDVGNGQVQK 516
+E DV+ G++L ++ G+ D + Q+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 92/214 (42%), Gaps = 14/214 (6%)
Query: 304 NFSPKNILGQGGYG-VVYKGCLPNRMVVAVKRLKDPNFTGE--VQFQT-EVEMIGLALHR 359
+F ILG+G + VV L A+K L+ + E V + T E +++ H
Sbjct: 8 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 67
Query: 360 NLLRLYGFCMTPEERLLV-YPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++LY F +E+L Y NG + +R D L Y
Sbjct: 68 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 122
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV-TTAVRGTVGHIAPE 477
LH + IIHRD+K NILL+E + DFG AK+L GT +++PE
Sbjct: 123 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 179
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGN 511
L+ + + +D++ G ++ +L+ G GN
Sbjct: 180 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 213
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 15/212 (7%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEV----QFQTEVEMIGLALHRNLLRLYG 366
LG+G YG V NR+ +K + V + E+ + + H N+++ YG
Sbjct: 14 LGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 367 FCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPK 426
+ L Y G + D + + P D R H + G++YLH
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMA---GVVYLH---GIG 124
Query: 427 IIHRDVKAANILLDESFEAVVGDFGLAKLLDRRD-SHVTTAVRGTVGHIAPEYLSTGQ-S 484
I HRD+K N+LLDE + DFGLA + + + + GT+ ++APE L +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 485 SEKTDVFGFGVLLLELITGQKALDVGNGQVQK 516
+E DV+ G++L ++ G+ D + Q+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 92/214 (42%), Gaps = 14/214 (6%)
Query: 304 NFSPKNILGQGGYG-VVYKGCLPNRMVVAVKRLKDPNFTGE--VQFQT-EVEMIGLALHR 359
+F ILG+G + VV L A+K L+ + E V + T E +++ H
Sbjct: 10 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 69
Query: 360 NLLRLYGFCMTPEERLLV-YPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++LY F +E+L Y NG + +R D L Y
Sbjct: 70 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 124
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV-TTAVRGTVGHIAPE 477
LH + IIHRD+K NILL+E + DFG AK+L GT +++PE
Sbjct: 125 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 181
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGN 511
L+ + + +D++ G ++ +L+ G GN
Sbjct: 182 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 215
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 92/214 (42%), Gaps = 14/214 (6%)
Query: 304 NFSPKNILGQGGYG-VVYKGCLPNRMVVAVKRLKDPNFTGE--VQFQT-EVEMIGLALHR 359
+F ILG+G + VV L A+K L+ + E V + T E +++ H
Sbjct: 9 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 68
Query: 360 NLLRLYGFCMTPEERLLV-YPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++LY F +E+L Y NG + +R D L Y
Sbjct: 69 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 123
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV-TTAVRGTVGHIAPE 477
LH + IIHRD+K NILL+E + DFG AK+L GT +++PE
Sbjct: 124 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 180
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGN 511
L+ + + +D++ G ++ +L+ G GN
Sbjct: 181 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 214
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 110/241 (45%), Gaps = 22/241 (9%)
Query: 311 LGQGGYGVVYKGC---LPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGF 367
LG GG G+V+ R+ + L DP E+++I H N+++++
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHAL--REIKIIRRLDHDNIVKVFEI 76
Query: 368 CMTPEERL---------LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
+L L Y+ + L + + P L+ + R+ + RGL Y
Sbjct: 77 LGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFM-YQLLRGLKY 135
Query: 419 LHEQCNPKIIHRDVKAANILLD-ESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVG--HIA 475
+H + ++HRD+K AN+ ++ E +GDFGLA+++D SH G V + +
Sbjct: 136 IH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRS 192
Query: 476 PEYL-STGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDV 534
P L S ++ D++ G + E++TG+ + Q +IL+ + +HEE R ++
Sbjct: 193 PRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQEL 252
Query: 535 L 535
L
Sbjct: 253 L 253
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 15/212 (7%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEV----QFQTEVEMIGLALHRNLLRLYG 366
LG+G YG V NR+ +K + V + E+ + + H N+++ YG
Sbjct: 13 LGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 70
Query: 367 FCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPK 426
+ L Y G + D + + P D R H + G++YLH
Sbjct: 71 HRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMA---GVVYLH---GIG 123
Query: 427 IIHRDVKAANILLDESFEAVVGDFGLAKLLDRRD-SHVTTAVRGTVGHIAPEYLSTGQ-S 484
I HRD+K N+LLDE + DFGLA + + + + GT+ ++APE L +
Sbjct: 124 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 183
Query: 485 SEKTDVFGFGVLLLELITGQKALDVGNGQVQK 516
+E DV+ G++L ++ G+ D + Q+
Sbjct: 184 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 215
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 92/214 (42%), Gaps = 14/214 (6%)
Query: 304 NFSPKNILGQGGYG-VVYKGCLPNRMVVAVKRLKDPNFTGE--VQFQT-EVEMIGLALHR 359
+F ILG+G + VV L A+K L+ + E V + T E +++ H
Sbjct: 11 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 70
Query: 360 NLLRLYGFCMTPEERLLV-YPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++LY F +E+L Y NG + +R D L Y
Sbjct: 71 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 125
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV-TTAVRGTVGHIAPE 477
LH + IIHRD+K NILL+E + DFG AK+L GT +++PE
Sbjct: 126 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 182
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGN 511
L+ + + +D++ G ++ +L+ G GN
Sbjct: 183 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 216
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 15/212 (7%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEV----QFQTEVEMIGLALHRNLLRLYG 366
LG+G YG V NR+ +K + V + E+ + + H N+++ YG
Sbjct: 15 LGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 367 FCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPK 426
+ L Y G + D + + P D R H + G++YLH
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMA---GVVYLH---GIG 125
Query: 427 IIHRDVKAANILLDESFEAVVGDFGLAKLLDRRD-SHVTTAVRGTVGHIAPEYLSTGQ-S 484
I HRD+K N+LLDE + DFGLA + + + + GT+ ++APE L +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 485 SEKTDVFGFGVLLLELITGQKALDVGNGQVQK 516
+E DV+ G++L ++ G+ D + Q+
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 15/212 (7%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEV----QFQTEVEMIGLALHRNLLRLYG 366
LG+G YG V NR+ +K + V + E+ + + H N+++ YG
Sbjct: 14 LGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 367 FCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPK 426
+ L Y G + D + + P D R H + G++YLH
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMA---GVVYLH---GIG 124
Query: 427 IIHRDVKAANILLDESFEAVVGDFGLAKLLDRRD-SHVTTAVRGTVGHIAPEYLSTGQ-S 484
I HRD+K N+LLDE + DFGLA + + + + GT+ ++APE L +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 485 SEKTDVFGFGVLLLELITGQKALDVGNGQVQK 516
+E DV+ G++L ++ G+ D + Q+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 15/212 (7%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEV----QFQTEVEMIGLALHRNLLRLYG 366
LG+G YG V NR+ +K + V + E+ + + H N+++ YG
Sbjct: 15 LGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 367 FCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPK 426
+ L Y G + D + + P D R H + G++YLH
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMA---GVVYLH---GIG 125
Query: 427 IIHRDVKAANILLDESFEAVVGDFGLAKLLDRRD-SHVTTAVRGTVGHIAPEYLSTGQ-S 484
I HRD+K N+LLDE + DFGLA + + + + GT+ ++APE L +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 485 SEKTDVFGFGVLLLELITGQKALDVGNGQVQK 516
+E DV+ G++L ++ G+ D + Q+
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 15/212 (7%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEV----QFQTEVEMIGLALHRNLLRLYG 366
LG+G YG V NR+ +K + V + E+ + + H N+++ YG
Sbjct: 15 LGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 367 FCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPK 426
+ L Y G + D + + P D R H + G++YLH
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMA---GVVYLH---GIG 125
Query: 427 IIHRDVKAANILLDESFEAVVGDFGLAKLLDRRD-SHVTTAVRGTVGHIAPEYLSTGQ-S 484
I HRD+K N+LLDE + DFGLA + + + + GT+ ++APE L +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 485 SEKTDVFGFGVLLLELITGQKALDVGNGQVQK 516
+E DV+ G++L ++ G+ D + Q+
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 15/212 (7%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEV----QFQTEVEMIGLALHRNLLRLYG 366
LG+G YG V NR+ +K + V + E+ + + H N+++ YG
Sbjct: 15 LGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 367 FCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPK 426
+ L Y G + D + + P D R H + G++YLH
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMA---GVVYLH---GIG 125
Query: 427 IIHRDVKAANILLDESFEAVVGDFGLAKLLDRRD-SHVTTAVRGTVGHIAPEYLSTGQ-S 484
I HRD+K N+LLDE + DFGLA + + + + GT+ ++APE L +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 485 SEKTDVFGFGVLLLELITGQKALDVGNGQVQK 516
+E DV+ G++L ++ G+ D + Q+
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 15/212 (7%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQ----FQTEVEMIGLALHRNLLRLYG 366
LG+G YG V NR+ +K + V + E+ + + H N+++ YG
Sbjct: 14 LGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 367 FCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPK 426
+ L Y G + D + + P D R H + G++YLH
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMA---GVVYLH---GIG 124
Query: 427 IIHRDVKAANILLDESFEAVVGDFGLAKLLDRRD-SHVTTAVRGTVGHIAPEYLSTGQ-S 484
I HRD+K N+LLDE + DFGLA + + + + GT+ ++APE L +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 485 SEKTDVFGFGVLLLELITGQKALDVGNGQVQK 516
+E DV+ G++L ++ G+ D + Q+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 101/217 (46%), Gaps = 32/217 (14%)
Query: 304 NFSPKNILGQGGYGVVYKGCLPNRM---VVAVKRLKDPNFTGEVQFQTEVEMIGLALHRN 360
+F ++G GG+G V+K +R+ +KR+K N E EV+ + H N
Sbjct: 12 DFKEIELIGSGGFGQVFKA--KHRIDGKTYVIKRVKYNNEKAE----REVKALAKLDHVN 65
Query: 361 LLRLYG----FCMTPEER------------LLVYPYMPNGSVADCLRDTRQAKPPLDWNR 404
++ G F PE + + G++ + R K LD
Sbjct: 66 IVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK--LDKVL 123
Query: 405 RMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVT 464
+ + +G+ Y+H + K+I+RD+K +NI L ++ + +GDFGL L ++
Sbjct: 124 ALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSL--KNDGKR 178
Query: 465 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELI 501
+GT+ +++PE +S+ ++ D++ G++L EL+
Sbjct: 179 XRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 15/212 (7%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQ----FQTEVEMIGLALHRNLLRLYG 366
LG+G YG V NR+ +K + V + E+ + + H N+++ YG
Sbjct: 15 LGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 367 FCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPK 426
+ L Y G + D + + P D R H + G++YLH
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMA---GVVYLH---GIG 125
Query: 427 IIHRDVKAANILLDESFEAVVGDFGLAKLLDRRD-SHVTTAVRGTVGHIAPEYLSTGQ-S 484
I HRD+K N+LLDE + DFGLA + + + + GT+ ++APE L +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 485 SEKTDVFGFGVLLLELITGQKALDVGNGQVQK 516
+E DV+ G++L ++ G+ D + Q+
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 15/212 (7%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEV----QFQTEVEMIGLALHRNLLRLYG 366
LG+G YG V NR+ +K + V + E+ + + H N+++ YG
Sbjct: 14 LGEGAYGEVQLAV--NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 367 FCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPK 426
+ L Y G + D + + P D R H + G++YLH
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMA---GVVYLH---GIG 124
Query: 427 IIHRDVKAANILLDESFEAVVGDFGLAKLLDRRD-SHVTTAVRGTVGHIAPEYLSTGQ-S 484
I HRD+K N+LLDE + DFGLA + + + + GT+ ++APE L +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 485 SEKTDVFGFGVLLLELITGQKALDVGNGQVQK 516
+E DV+ G++L ++ G+ D + Q+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 120/281 (42%), Gaps = 40/281 (14%)
Query: 311 LGQGGYGVVYKG------CLPNRMVVAVKRLKDPNFTGEVQ-FQTEVE-MIGLALHRNLL 362
LG+G +G V + VAVK LK+ E + +E++ +I + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 363 RLYGFCMTPEERLLVY-PYMPNGSVADCLRDTRQAKPP--------LDWNRRMHIALGTA 413
L G C P L+V + G+++ LR R P L + + A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 414 RGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTA-VRGTVG 472
+G+ +L + K IHRD+ A NILL E + DFGLA+ + + +V R +
Sbjct: 155 KGMEFLASR---KXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 473 HIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILD--CVRTLHEER 530
+APE + + ++DV+ FGVLL E+ + G+ +D R L E
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFXRRLKEGT 264
Query: 531 RLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
R+ + D T E M Q L C P+ RP S
Sbjct: 265 RMR---------APDYTTPE-MYQTMLDCWHGEPSQRPTFS 295
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 105/228 (46%), Gaps = 25/228 (10%)
Query: 289 HLKRFSFRE-LQIATGNFSPKNIL------GQGGYGVVYKGCLPNR-MVVAVKRLKDPNF 340
H+ FR LQ+ P++ L G+G G+V + + +VAVK++
Sbjct: 3 HMSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ 62
Query: 341 TGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPL 400
EV ++ H N++ +Y + +E +V ++ G++ D + TR +
Sbjct: 63 QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR-----M 117
Query: 401 DWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFG----LAKLL 456
+ + + L + L LH Q +IHRD+K+ +ILL + DFG ++K +
Sbjct: 118 NEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV 174
Query: 457 DRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQ 504
RR V GT +APE +S + D++ G++++E++ G+
Sbjct: 175 PRRKXLV-----GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 217
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 103/217 (47%), Gaps = 18/217 (8%)
Query: 299 QIATGNFSPKNILGQGGYGVVYKG---CLPNRMVVAV---KRLKDPNFTGEVQFQTEVEM 352
++ G++ + LG G +G V G +++ V + ++++ + G+++ E++
Sbjct: 7 RVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIK--REIQN 64
Query: 353 IGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGT 412
+ L H ++++LY TP + +V Y+ G + D + + + RR+ + +
Sbjct: 65 LKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYI--CKHGRVEEMEARRLFQQILS 122
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVG 472
A + H ++HRD+K N+LLD A + DFGL+ ++ D G+
Sbjct: 123 AVDYCHRH-----MVVHRDLKPENVLLDAHMNAKIADFGLSNMMS--DGEFLRDSCGSPN 175
Query: 473 HIAPEYLSTG-QSSEKTDVFGFGVLLLELITGQKALD 508
+ APE +S + + D++ GV+L L+ G D
Sbjct: 176 YAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 412 TARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTV 471
T +G+ YLH N ++IHRD+K N+ L++ + +GDFGLA ++ D + GT
Sbjct: 151 TIQGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIE-FDGERKKTLCGTP 206
Query: 472 GHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALD 508
+IAPE L S + D++ G +L L+ G+ +
Sbjct: 207 NYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 101/208 (48%), Gaps = 18/208 (8%)
Query: 304 NFSPKNILGQGGYGVVY---KGCLPNR-MVVAVKRLKDPNFTGEVQFQTEVEMIGLAL-- 357
+F +LGQG +G V+ K P+ + A+K LK + +T++E LA
Sbjct: 29 HFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVN 88
Query: 358 HRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGT-ARGL 416
H +++L+ T + L+ ++ G + TR +K + + L A GL
Sbjct: 89 HPFVVKLHYAFQTEGKLYLILDFLRGGDLF-----TRLSKEVMFTEEDVKFYLAELALGL 143
Query: 417 LYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAK-LLDRRDSHVTTAVRGTVGHIA 475
+LH II+RD+K NILLDE + DFGL+K +D + GTV ++A
Sbjct: 144 DHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFC--GTVEYMA 198
Query: 476 PEYLSTGQSSEKTDVFGFGVLLLELITG 503
PE ++ S D + +GVL+ E++TG
Sbjct: 199 PEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 96/217 (44%), Gaps = 22/217 (10%)
Query: 298 LQIATGNFSPKNIL------GQGGYGVVYKGCLPNRM----VVAVKRLKDPNFTGEVQFQ 347
LQ+ P+ L G+G G+V C+ VAVK++
Sbjct: 34 LQLVVSPGDPREYLANFIKIGEGSTGIV---CIATEKHTGKQVAVKKMDLRKQQRRELLF 90
Query: 348 TEVEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMH 407
EV ++ H N++ +Y + +E +V ++ G++ D + TR ++ +
Sbjct: 91 NEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTR-----MNEEQIAT 145
Query: 408 IALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAV 467
+ L R L YLH Q +IHRD+K+ +ILL + DFG + + V
Sbjct: 146 VCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLV 202
Query: 468 RGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQ 504
GT +APE +S + D++ G++++E+I G+
Sbjct: 203 -GTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGE 238
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 88/205 (42%), Gaps = 20/205 (9%)
Query: 311 LGQGGYGVVYKGCLP-------NRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLR 363
LG G +G V KG + + DP E+ E ++ + ++R
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELL--AEANVMQQLDNPYIVR 70
Query: 364 LYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQC 423
+ G C E +LV G + L+ R K + + + G+ YL E
Sbjct: 71 MIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD----KNIIELVHQVSMGMKYLEES- 124
Query: 424 NPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGT--VGHIAPEYLST 481
+HRD+ A N+LL A + DFGL+K L +++ G V APE ++
Sbjct: 125 --NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 182
Query: 482 GQSSEKTDVFGFGVLLLELIT-GQK 505
+ S K+DV+ FGVL+ E + GQK
Sbjct: 183 YKFSSKSDVWSFGVLMWEAFSYGQK 207
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 83/175 (47%), Gaps = 33/175 (18%)
Query: 400 LDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRR 459
LDW ++ +AL ++H++ KI+HRD+K+ NI L + +GDFG+A++L+
Sbjct: 128 LDWFVQICLALK------HVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLN-S 177
Query: 460 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMI 519
+ A GT +++PE + K+D++ G +L EL T + A + G+ K ++
Sbjct: 178 TVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS---MKNLV 234
Query: 520 LDCVRTLHEERRLDVLIDRDLKGSFDPTELE---KMVQLALQCTQSHPNLRPKMS 571
L + GSF P L + L Q + +P RP ++
Sbjct: 235 LKII-----------------SGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVN 272
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 412 TARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTV 471
T +G+ YLH N ++IHRD+K N+ L++ + +GDFGLA ++ D + GT
Sbjct: 151 TIQGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIE-FDGERKKXLCGTP 206
Query: 472 GHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALD 508
+IAPE L S + D++ G +L L+ G+ +
Sbjct: 207 NYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 56/101 (55%), Gaps = 8/101 (7%)
Query: 408 IALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAV 467
I L T + L +L E N KIIHRD+K +NILLD S + DFG++ L DS T
Sbjct: 130 ITLATVKALNHLKE--NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQL--VDSIAKTRD 185
Query: 468 RGTVGHIAPEYLSTGQSSE----KTDVFGFGVLLLELITGQ 504
G ++APE + S + ++DV+ G+ L EL TG+
Sbjct: 186 AGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 88/205 (42%), Gaps = 20/205 (9%)
Query: 311 LGQGGYGVVYKGCLP-------NRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLR 363
LG G +G V KG + + DP E+ E ++ + ++R
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELL--AEANVMQQLDNPYIVR 72
Query: 364 LYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQC 423
+ G C E +LV G + L+ R K + + + G+ YL E
Sbjct: 73 MIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD----KNIIELVHQVSMGMKYLEES- 126
Query: 424 NPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGT--VGHIAPEYLST 481
+HRD+ A N+LL A + DFGL+K L +++ G V APE ++
Sbjct: 127 --NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 184
Query: 482 GQSSEKTDVFGFGVLLLELIT-GQK 505
+ S K+DV+ FGVL+ E + GQK
Sbjct: 185 YKFSSKSDVWSFGVLMWEAFSYGQK 209
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 88/205 (42%), Gaps = 20/205 (9%)
Query: 311 LGQGGYGVVYKGCLP-------NRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLR 363
LG G +G V KG + + DP E+ E ++ + ++R
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELL--AEANVMQQLDNPYIVR 90
Query: 364 LYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQC 423
+ G C E +LV G + L+ R K + + + G+ YL E
Sbjct: 91 MIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD----KNIIELVHQVSMGMKYLEES- 144
Query: 424 NPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGT--VGHIAPEYLST 481
+HRD+ A N+LL A + DFGL+K L +++ G V APE ++
Sbjct: 145 --NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 202
Query: 482 GQSSEKTDVFGFGVLLLELIT-GQK 505
+ S K+DV+ FGVL+ E + GQK
Sbjct: 203 YKFSSKSDVWSFGVLMWEAFSYGQK 227
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 88/205 (42%), Gaps = 20/205 (9%)
Query: 311 LGQGGYGVVYKGCLP-------NRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLR 363
LG G +G V KG + + DP E+ E ++ + ++R
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELL--AEANVMQQLDNPYIVR 76
Query: 364 LYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQC 423
+ G C E +LV G + L+ R K + + + G+ YL E
Sbjct: 77 MIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD----KNIIELVHQVSMGMKYLEES- 130
Query: 424 NPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGT--VGHIAPEYLST 481
+HRD+ A N+LL A + DFGL+K L +++ G V APE ++
Sbjct: 131 --NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 188
Query: 482 GQSSEKTDVFGFGVLLLELIT-GQK 505
+ S K+DV+ FGVL+ E + GQK
Sbjct: 189 YKFSSKSDVWSFGVLMWEAFSYGQK 213
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 412 TARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTV 471
T +G+ YLH N ++IHRD+K N+ L++ + +GDFGLA ++ D + GT
Sbjct: 135 TIQGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIE-FDGERKKDLCGTP 190
Query: 472 GHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALD 508
+IAPE L S + D++ G +L L+ G+ +
Sbjct: 191 NYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 227
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 88/205 (42%), Gaps = 20/205 (9%)
Query: 311 LGQGGYGVVYKGCLP-------NRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLR 363
LG G +G V KG + + DP E+ E ++ + ++R
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELL--AEANVMQQLDNPYIVR 82
Query: 364 LYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQC 423
+ G C E +LV G + L+ R K + + + G+ YL E
Sbjct: 83 MIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD----KNIIELVHQVSMGMKYLEES- 136
Query: 424 NPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGT--VGHIAPEYLST 481
+HRD+ A N+LL A + DFGL+K L +++ G V APE ++
Sbjct: 137 --NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 194
Query: 482 GQSSEKTDVFGFGVLLLELIT-GQK 505
+ S K+DV+ FGVL+ E + GQK
Sbjct: 195 YKFSSKSDVWSFGVLMWEAFSYGQK 219
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 88/205 (42%), Gaps = 20/205 (9%)
Query: 311 LGQGGYGVVYKGCLP-------NRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLR 363
LG G +G V KG + + DP E+ E ++ + ++R
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELL--AEANVMQQLDNPYIVR 92
Query: 364 LYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQC 423
+ G C E +LV G + L+ R K + + + G+ YL E
Sbjct: 93 MIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD----KNIIELVHQVSMGMKYLEES- 146
Query: 424 NPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGT--VGHIAPEYLST 481
+HRD+ A N+LL A + DFGL+K L +++ G V APE ++
Sbjct: 147 --NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 204
Query: 482 GQSSEKTDVFGFGVLLLELIT-GQK 505
+ S K+DV+ FGVL+ E + GQK
Sbjct: 205 YKFSSKSDVWSFGVLMWEAFSYGQK 229
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 88/205 (42%), Gaps = 20/205 (9%)
Query: 311 LGQGGYGVVYKGCLP-------NRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLR 363
LG G +G V KG + + DP E+ E ++ + ++R
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELL--AEANVMQQLDNPYIVR 92
Query: 364 LYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQC 423
+ G C E +LV G + L+ R K + + + G+ YL E
Sbjct: 93 MIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD----KNIIELVHQVSMGMKYLEES- 146
Query: 424 NPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGT--VGHIAPEYLST 481
+HRD+ A N+LL A + DFGL+K L +++ G V APE ++
Sbjct: 147 --NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 204
Query: 482 GQSSEKTDVFGFGVLLLELIT-GQK 505
+ S K+DV+ FGVL+ E + GQK
Sbjct: 205 YKFSSKSDVWSFGVLMWEAFSYGQK 229
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 412 TARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTV 471
T +G+ YLH N ++IHRD+K N+ L++ + +GDFGLA ++ D + GT
Sbjct: 151 TIQGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIE-FDGERKKDLCGTP 206
Query: 472 GHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALD 508
+IAPE L S + D++ G +L L+ G+ +
Sbjct: 207 NYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 122/281 (43%), Gaps = 40/281 (14%)
Query: 311 LGQGGYGVVYKG------CLPNRMVVAVKRLKDPNFTGEVQ-FQTEVE-MIGLALHRNLL 362
LG+G +G V + VAVK LK+ E + +E++ +I + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 363 RLYGFCMTPEERLLVY-PYMPNGSVADCLRDTRQAKPPL-----DWNRRMHI---ALGTA 413
L G C P L+V + G+++ LR R P D+ H+ + A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 414 RGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTA-VRGTVG 472
+G+ +L + K IHRD+ A NILL E + DFGLA+ + + +V R +
Sbjct: 155 KGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 473 HIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILD--CVRTLHEER 530
+APE + + ++DV+ FGVLL E+ + G+ +D R L E
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRLKEGT 264
Query: 531 RLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
R+ + D T E M Q L C P+ RP S
Sbjct: 265 RMR---------APDYTTPE-MYQTMLDCWHGEPSQRPTFS 295
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 105/210 (50%), Gaps = 13/210 (6%)
Query: 298 LQIATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQT--EVEMIGL 355
+++ +F + LG G GVV+K +V ++L ++ Q E++++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 356 ALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARG 415
++ YG + E + +M GS+ L+ + + P ++ IA+ +G
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK--KAGRIPEQILGKVSIAV--IKG 116
Query: 416 LLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLA-KLLDRRDSHVTTAVRGTVGHI 474
L YL E+ KI+HRDVK +NIL++ E + DFG++ +L+D + + GT ++
Sbjct: 117 LTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYM 170
Query: 475 APEYLSTGQSSEKTDVFGFGVLLLELITGQ 504
+PE L S ++D++ G+ L+E+ G+
Sbjct: 171 SPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 91/214 (42%), Gaps = 14/214 (6%)
Query: 304 NFSPKNILGQGGYGV-VYKGCLPNRMVVAVKRLKDPNFTGE--VQFQT-EVEMIGLALHR 359
+F ILG+G + V L A+K L+ + E V + T E +++ H
Sbjct: 31 DFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 360 NLLRLYGFCMTPEERLLV-YPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++LY F +E+L Y NG + +R D L Y
Sbjct: 91 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 145
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV-TTAVRGTVGHIAPE 477
LH + IIHRD+K NILL+E + DFG AK+L GT +++PE
Sbjct: 146 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGN 511
L+ + + +D++ G ++ +L+ G GN
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 236
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 105/210 (50%), Gaps = 13/210 (6%)
Query: 298 LQIATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQT--EVEMIGL 355
+++ +F + LG G GVV+K +V ++L ++ Q E++++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 356 ALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARG 415
++ YG + E + +M GS+ L+ + + P ++ IA+ +G
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK--KAGRIPEQILGKVSIAV--IKG 116
Query: 416 LLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLA-KLLDRRDSHVTTAVRGTVGHI 474
L YL E+ KI+HRDVK +NIL++ E + DFG++ +L+D + + GT ++
Sbjct: 117 LTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYM 170
Query: 475 APEYLSTGQSSEKTDVFGFGVLLLELITGQ 504
+PE L S ++D++ G+ L+E+ G+
Sbjct: 171 SPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 105/210 (50%), Gaps = 13/210 (6%)
Query: 298 LQIATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQT--EVEMIGL 355
+++ +F + LG G GVV+K +V ++L ++ Q E++++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 356 ALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARG 415
++ YG + E + +M GS+ L+ + + P ++ IA+ +G
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK--KAGRIPEQILGKVSIAV--IKG 116
Query: 416 LLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLA-KLLDRRDSHVTTAVRGTVGHI 474
L YL E+ KI+HRDVK +NIL++ E + DFG++ +L+D + + GT ++
Sbjct: 117 LTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYM 170
Query: 475 APEYLSTGQSSEKTDVFGFGVLLLELITGQ 504
+PE L S ++D++ G+ L+E+ G+
Sbjct: 171 SPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 105/210 (50%), Gaps = 13/210 (6%)
Query: 298 LQIATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQT--EVEMIGL 355
+++ +F + LG G GVV+K +V ++L ++ Q E++++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 356 ALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARG 415
++ YG + E + +M GS+ L+ + + P ++ IA+ +G
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK--KAGRIPEQILGKVSIAV--IKG 116
Query: 416 LLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLA-KLLDRRDSHVTTAVRGTVGHI 474
L YL E+ KI+HRDVK +NIL++ E + DFG++ +L+D + + GT ++
Sbjct: 117 LTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYM 170
Query: 475 APEYLSTGQSSEKTDVFGFGVLLLELITGQ 504
+PE L S ++D++ G+ L+E+ G+
Sbjct: 171 SPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 105/210 (50%), Gaps = 13/210 (6%)
Query: 298 LQIATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQT--EVEMIGL 355
+++ +F + LG G GVV+K +V ++L ++ Q E++++
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 356 ALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARG 415
++ YG + E + +M GS+ L+ + + P ++ IA+ +G
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK--KAGRIPEQILGKVSIAV--IKG 116
Query: 416 LLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLA-KLLDRRDSHVTTAVRGTVGHI 474
L YL E+ KI+HRDVK +NIL++ E + DFG++ +L+D + + GT ++
Sbjct: 117 LTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYM 170
Query: 475 APEYLSTGQSSEKTDVFGFGVLLLELITGQ 504
+PE L S ++D++ G+ L+E+ G+
Sbjct: 171 SPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 100/218 (45%), Gaps = 19/218 (8%)
Query: 299 QIATGNFSPKNILGQGGYGVVYKGCLPNRM----VVAVKRLKDPNFTGEVQFQ-TEVEMI 353
++ +F+ +LG+G +G V L +R + A+K LK + + T VE
Sbjct: 15 RVKLTDFNFLMVLGKGSFGKV---MLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKR 71
Query: 354 GLALHRN---LLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIAL 410
LAL L +L+ T + V Y+ G + ++ + K P + + A
Sbjct: 72 VLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEP----QAVFYAA 127
Query: 411 GTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGT 470
+ GL +LH++ II+RD+K N++LD + DFG+ K D T GT
Sbjct: 128 EISIGLFFLHKR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE-HMMDGVTTREFCGT 183
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALD 508
+IAPE ++ + D + +GVLL E++ GQ D
Sbjct: 184 PDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 111/269 (41%), Gaps = 15/269 (5%)
Query: 266 VHWYRSRLLFTSYVQQDYEFDVGHLKRFSFRELQIATGN-FSPKNILGQGGYGVV----Y 320
H Y S F Y+ Y ++ + E Q T N F +LG+GG+G V
Sbjct: 149 THEYLSVAPFADYLDSIY---FNRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQV 205
Query: 321 KGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPY 380
+ +++ + GE E +++ R ++ L T + LV
Sbjct: 206 RATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 265
Query: 381 MPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLD 440
M G + + QA P R + A GL LH + +I++RD+K NILLD
Sbjct: 266 MNGGDLKFHIYHMGQAGFPE--ARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLD 320
Query: 441 ESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLEL 500
+ + D GLA + + GTVG++APE + + + D + G LL E+
Sbjct: 321 DHGHIRISDLGLAVHVP--EGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEM 378
Query: 501 ITGQKALDVGNGQVQKGMILDCVRTLHEE 529
I GQ ++++ + V+ + EE
Sbjct: 379 IAGQSPFQQRKKKIKREEVERLVKEVPEE 407
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 87/205 (42%), Gaps = 20/205 (9%)
Query: 311 LGQGGYGVVYKGCLP-------NRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLR 363
LG G +G V KG + + DP E+ E ++ + ++R
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELL--AEANVMQQLDNPYIVR 76
Query: 364 LYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQC 423
+ G C E +LV G + L+ R K + + + G+ YL E
Sbjct: 77 MIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD----KNIIELVHQVSMGMKYLEES- 130
Query: 424 NPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRRDSHVTTAVRGTVGHIAPEYLST 481
+HRD+ A N+LL A + DFGL+K L D T + V APE ++
Sbjct: 131 --NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINY 188
Query: 482 GQSSEKTDVFGFGVLLLELIT-GQK 505
+ S K+DV+ FGVL+ E + GQK
Sbjct: 189 YKFSSKSDVWSFGVLMWEAFSYGQK 213
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 22/220 (10%)
Query: 296 RELQIATGNFSPKNILGQGGYGVV----YKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVE 351
R LQ+ ++ ++G+G +G V +K + + + + + F E +
Sbjct: 68 RGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERD 127
Query: 352 MIGLALHRNLLRLYGFCMTPEERLL--VYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIA 409
++ A +++L FC +++ L V YMP G + + + + P W +
Sbjct: 128 IMAFANSPWVVQL--FCAFQDDKYLYMVMEYMPGGDLVNLMSNY---DVPEKWAK----- 177
Query: 410 LGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRD-SHVTTAVR 468
TA +L L + +IHRDVK N+LLD+ + DFG +D H TAV
Sbjct: 178 FYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAV- 236
Query: 469 GTVGHIAPEYLST----GQSSEKTDVFGFGVLLLELITGQ 504
GT +I+PE L + G + D + GV L E++ G
Sbjct: 237 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGD 276
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 90/205 (43%), Gaps = 20/205 (9%)
Query: 311 LGQGGYGVVYKGCLP-------NRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLR 363
LG G +G V KG + + DP E+ E ++ + ++R
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELL--AEANVMQQLDNPYIVR 434
Query: 364 LYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQC 423
+ G C E +LV G + L+ R K D N + + + G+ YL E
Sbjct: 435 MIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVK---DKNI-IELVHQVSMGMKYLEES- 488
Query: 424 NPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGT--VGHIAPEYLST 481
+HRD+ A N+LL A + DFGL+K L +++ G V APE ++
Sbjct: 489 --NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 546
Query: 482 GQSSEKTDVFGFGVLLLELIT-GQK 505
+ S K+DV+ FGVL+ E + GQK
Sbjct: 547 YKFSSKSDVWSFGVLMWEAFSYGQK 571
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 111/269 (41%), Gaps = 15/269 (5%)
Query: 266 VHWYRSRLLFTSYVQQDYEFDVGHLKRFSFRELQIATGN-FSPKNILGQGGYGVV----Y 320
H Y S F Y+ Y ++ + E Q T N F +LG+GG+G V
Sbjct: 149 THEYLSVAPFADYLDSIY---FNRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQV 205
Query: 321 KGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPY 380
+ +++ + GE E +++ R ++ L T + LV
Sbjct: 206 RATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 265
Query: 381 MPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLD 440
M G + + QA P R + A GL LH + +I++RD+K NILLD
Sbjct: 266 MNGGDLKFHIYHMGQAGFPE--ARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLD 320
Query: 441 ESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLEL 500
+ + D GLA + + GTVG++APE + + + D + G LL E+
Sbjct: 321 DHGHIRISDLGLAVHVP--EGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEM 378
Query: 501 ITGQKALDVGNGQVQKGMILDCVRTLHEE 529
I GQ ++++ + V+ + EE
Sbjct: 379 IAGQSPFQQRKKKIKREEVERLVKEVPEE 407
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 90/205 (43%), Gaps = 20/205 (9%)
Query: 311 LGQGGYGVVYKGCLP-------NRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLR 363
LG G +G V KG + + DP E+ E ++ + ++R
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELL--AEANVMQQLDNPYIVR 435
Query: 364 LYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQC 423
+ G C E +LV G + L+ R K D N + + + G+ YL E
Sbjct: 436 MIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVK---DKNI-IELVHQVSMGMKYLEES- 489
Query: 424 NPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGT--VGHIAPEYLST 481
+HRD+ A N+LL A + DFGL+K L +++ G V APE ++
Sbjct: 490 --NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 547
Query: 482 GQSSEKTDVFGFGVLLLELIT-GQK 505
+ S K+DV+ FGVL+ E + GQK
Sbjct: 548 YKFSSKSDVWSFGVLMWEAFSYGQK 572
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 99/211 (46%), Gaps = 15/211 (7%)
Query: 303 GNFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFTG---EVQFQTEVEMIGLALH 358
G + + LG+G +G V + VA+K + ++ + E+ + L H
Sbjct: 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRH 68
Query: 359 RNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++++LY TP + ++V Y G + D + + ++ D RR + A + Y
Sbjct: 69 PHIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTE--DEGRRFFQQIICA--IEY 123
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEY 478
H KI+HRD+K N+LLD++ + DFGL+ ++ D + G+ + APE
Sbjct: 124 CHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMT--DGNFLKTSCGSPNYAAPEV 178
Query: 479 LSTG-QSSEKTDVFGFGVLLLELITGQKALD 508
++ + + DV+ G++L ++ G+ D
Sbjct: 179 INGKLYAGPEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 95/199 (47%), Gaps = 18/199 (9%)
Query: 311 LGQGGYGVVYKGCLPNR-MVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCM 369
+G+G G+V + + +VAVK++ EV ++ H N++ +Y +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 370 TPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIH 429
+E +V ++ G++ D + TR ++ + + L + L LH Q +IH
Sbjct: 88 VGDELWVVMEFLEGGALTDIVTHTR-----MNEEQIAAVCLAVLQALSVLHAQG---VIH 139
Query: 430 RDVKAANILLDESFEAVVGDFG----LAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSS 485
RD+K+ +ILL + DFG ++K + RR V GT +APE +S
Sbjct: 140 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-----GTPYWMAPELISRLPYG 194
Query: 486 EKTDVFGFGVLLLELITGQ 504
+ D++ G++++E++ G+
Sbjct: 195 PEVDIWSLGIMVIEMVDGE 213
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 119/283 (42%), Gaps = 42/283 (14%)
Query: 311 LGQGGYGVVYKG------CLPNRMVVAVKRLKDPNFTGEVQ-FQTEVE-MIGLALHRNLL 362
LG+G +G V + VAVK LK+ E + +E++ +I + H N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 363 RLYGFCMTPEERLLVY-PYMPNGSVADCLRDTRQAKPP----------LDWNRRMHIALG 411
L G C P L+V + G+++ LR R P L + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 412 TARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTA-VRGT 470
A+G+ +L + K IHRD+ A NILL E + DFGLA+ + + V R
Sbjct: 157 VAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILD--CVRTLHE 528
+ +APE + + ++DV+ FGVLL E+ + G+ +D R L E
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRLKE 266
Query: 529 ERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
R+ + D T E M Q L C P+ RP S
Sbjct: 267 GTRMR---------APDYTTPE-MYQTMLDCWHGEPSQRPTFS 299
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 100/221 (45%), Gaps = 16/221 (7%)
Query: 311 LGQGGYGVVYKGCLP-NRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCM 369
L + G ++KG N +VV V +++D + F E + + H N+L + G C
Sbjct: 18 LNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQ 77
Query: 370 TP--EERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKI 427
+P L+ +MP GS+ + L + +D ++ + AL ARG+ +LH P I
Sbjct: 78 SPPAPHPTLITHWMPYGSLYNVLHEGTNFV--VDQSQAVKFALDMARGMAFLH-TLEPLI 134
Query: 428 IHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQ---S 484
+ + ++++DE A + + D + S + +APE L +
Sbjct: 135 PRHALNSRSVMIDEDMTARIS------MADVKFSFQSPGRMYAPAWVAPEALQKKPEDTN 188
Query: 485 SEKTDVFGFGVLLLELITGQKAL-DVGNGQVQKGMILDCVR 524
D++ F VLL EL+T + D+ N ++ + L+ +R
Sbjct: 189 RRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLR 229
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 125/279 (44%), Gaps = 31/279 (11%)
Query: 311 LGQGGYGVVYKGC-LPNR-MVVAVKRLKDPNFTGEVQFQTEVEMIGLA-----LHRNLLR 363
+G+G YG V+K L N VA+KR++ + T E+ L H N++R
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 364 LYGFCMTP----EERL-LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
L+ C E +L LV+ ++ + + L + P + + M L RGL +
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQL--LRGLDF 135
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEY 478
LH +++HRD+K NIL+ S + + DFGLA++ + T+V T+ + APE
Sbjct: 136 LHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ--MALTSVVVTLWYRAPEV 190
Query: 479 LSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQV-QKGMILDCVRTLHEER-RLDVLI 536
L + D++ G + E+ +K L G+ V Q G ILD + EE DV +
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVAL 249
Query: 537 DRDLKGSFDPTELEKMV--------QLALQCTQSHPNLR 567
R S +EK V L L+C +P R
Sbjct: 250 PRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKR 288
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 95/199 (47%), Gaps = 18/199 (9%)
Query: 311 LGQGGYGVVYKGCLPNR-MVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCM 369
+G+G G+V + + +VAVK++ EV ++ H N++ +Y +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 370 TPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIH 429
+E +V ++ G++ D + TR ++ + + L + L LH Q +IH
Sbjct: 99 VGDELWVVMEFLEGGALTDIVTHTR-----MNEEQIAAVCLAVLQALSVLHAQG---VIH 150
Query: 430 RDVKAANILLDESFEAVVGDFG----LAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSS 485
RD+K+ +ILL + DFG ++K + RR V GT +APE +S
Sbjct: 151 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-----GTPYWMAPELISRLPYG 205
Query: 486 EKTDVFGFGVLLLELITGQ 504
+ D++ G++++E++ G+
Sbjct: 206 PEVDIWSLGIMVIEMVDGE 224
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 104/209 (49%), Gaps = 13/209 (6%)
Query: 299 QIATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQT--EVEMIGLA 356
++ +F + LG G GVV+K +V ++L ++ Q E++++
Sbjct: 29 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 88
Query: 357 LHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGL 416
++ YG + E + +M GS+ L+ + + P ++ IA+ +GL
Sbjct: 89 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK--KAGRIPEQILGKVSIAV--IKGL 144
Query: 417 LYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLA-KLLDRRDSHVTTAVRGTVGHIA 475
YL E+ KI+HRDVK +NIL++ E + DFG++ +L+D + + GT +++
Sbjct: 145 TYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMS 198
Query: 476 PEYLSTGQSSEKTDVFGFGVLLLELITGQ 504
PE L S ++D++ G+ L+E+ G+
Sbjct: 199 PERLQGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 104/209 (49%), Gaps = 13/209 (6%)
Query: 299 QIATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQT--EVEMIGLA 356
++ +F + LG G GVV+K +V ++L ++ Q E++++
Sbjct: 64 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 123
Query: 357 LHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGL 416
++ YG + E + +M GS+ L+ + + P ++ IA+ +GL
Sbjct: 124 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK--KAGRIPEQILGKVSIAV--IKGL 179
Query: 417 LYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLA-KLLDRRDSHVTTAVRGTVGHIA 475
YL E+ KI+HRDVK +NIL++ E + DFG++ +L+D + + GT +++
Sbjct: 180 TYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMS 233
Query: 476 PEYLSTGQSSEKTDVFGFGVLLLELITGQ 504
PE L S ++D++ G+ L+E+ G+
Sbjct: 234 PERLQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 95/199 (47%), Gaps = 18/199 (9%)
Query: 311 LGQGGYGVVYKGCLPNR-MVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCM 369
+G+G G+V + + +VAVK++ EV ++ H N++ +Y +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 370 TPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIH 429
+E +V ++ G++ D + TR ++ + + L + L LH Q +IH
Sbjct: 97 VGDELWVVMEFLEGGALTDIVTHTR-----MNEEQIAAVCLAVLQALSVLHAQG---VIH 148
Query: 430 RDVKAANILLDESFEAVVGDFG----LAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSS 485
RD+K+ +ILL + DFG ++K + RR V GT +APE +S
Sbjct: 149 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-----GTPYWMAPELISRLPYG 203
Query: 486 EKTDVFGFGVLLLELITGQ 504
+ D++ G++++E++ G+
Sbjct: 204 PEVDIWSLGIMVIEMVDGE 222
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 89/195 (45%), Gaps = 10/195 (5%)
Query: 311 LGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCM 369
+GQG G VY + VA++++ + E+ ++ + N++ +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 370 TPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIH 429
+E +V Y+ GS+ D + +T +D + + + L +LH ++IH
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHSN---QVIH 139
Query: 430 RDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTD 489
RD+K+ NILL + DFG + S +T V GT +APE ++ K D
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKVD 198
Query: 490 VFGFGVLLLELITGQ 504
++ G++ +E+I G+
Sbjct: 199 IWSLGIMAIEMIEGE 213
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 9/161 (5%)
Query: 358 HRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLL 417
H N+++ YG + L Y G + D + + P D R H + G++
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMA---GVV 118
Query: 418 YLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRD-SHVTTAVRGTVGHIAP 476
YLH I HRD+K N+LLDE + DFGLA + + + + GT+ ++AP
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 477 EYLSTGQ-SSEKTDVFGFGVLLLELITGQKALDVGNGQVQK 516
E L + +E DV+ G++L ++ G+ D + Q+
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 103/209 (49%), Gaps = 13/209 (6%)
Query: 299 QIATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQT--EVEMIGLA 356
++ +F + LG G GVV+K +V ++L ++ Q E++++
Sbjct: 5 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 64
Query: 357 LHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGL 416
++ YG + E + +M GS+ L+ + + P ++ IA+ +GL
Sbjct: 65 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK--KAGRIPEQILGKVSIAV--IKGL 120
Query: 417 LYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLA-KLLDRRDSHVTTAVRGTVGHIA 475
YL E+ KI+HRDVK +NIL++ E + DFG++ +L+D + GT +++
Sbjct: 121 TYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDE----MANEFVGTRSYMS 174
Query: 476 PEYLSTGQSSEKTDVFGFGVLLLELITGQ 504
PE L S ++D++ G+ L+E+ G+
Sbjct: 175 PERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 107/211 (50%), Gaps = 17/211 (8%)
Query: 299 QIATGNFSPKNILGQGGYGVVYK-GCLPNRMVVAVKRLK---DPNFTGEVQFQTEVEMIG 354
++ +F + LG G GVV K P+ +++A K + P Q E++++
Sbjct: 12 ELKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRN--QIIRELQVLH 69
Query: 355 LALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTAR 414
++ YG + E + +M GS+ L++ ++ P + ++ IA+ R
Sbjct: 70 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRI--PEEILGKVSIAV--LR 125
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLA-KLLDRRDSHVTTAVRGTVGH 473
GL YL E+ +I+HRDVK +NIL++ E + DFG++ +L+D + + GT +
Sbjct: 126 GLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSY 179
Query: 474 IAPEYLSTGQSSEKTDVFGFGVLLLELITGQ 504
+APE L S ++D++ G+ L+EL G+
Sbjct: 180 MAPERLQGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 95/199 (47%), Gaps = 18/199 (9%)
Query: 311 LGQGGYGVVYKGCLPNR-MVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCM 369
+G+G G+V + + +VAVK++ EV ++ H N++ +Y +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 370 TPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIH 429
+E +V ++ G++ D + TR ++ + + L + L LH Q +IH
Sbjct: 219 VGDELWVVMEFLEGGALTDIVTHTR-----MNEEQIAAVCLAVLQALSVLHAQG---VIH 270
Query: 430 RDVKAANILLDESFEAVVGDFG----LAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSS 485
RD+K+ +ILL + DFG ++K + RR V GT +APE +S
Sbjct: 271 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-----GTPYWMAPELISRLPYG 325
Query: 486 EKTDVFGFGVLLLELITGQ 504
+ D++ G++++E++ G+
Sbjct: 326 PEVDIWSLGIMVIEMVDGE 344
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 117/273 (42%), Gaps = 38/273 (13%)
Query: 298 LQIATGNFSPKNILGQGGYGVVYKGC-------LPNRMVVAVKRLKDPNFTGEVQFQTEV 350
+ + +FS I+G+GG+G VY GC + + KR+K GE E
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVY-GCRKADTGKMYAMKCLDKKRIKMKQ--GETLALNER 240
Query: 351 EMIGLALHRN----LLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRM 406
M+ L + + Y F TP++ + M G D Q + + R
Sbjct: 241 IMLSLVSTGDCPFIVCMSYAF-HTPDKLSFILDLMNGG---DLHYHLSQHGVFSEADMRF 296
Query: 407 HIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTA 466
+ A GL ++H N +++RD+K ANILLDE + D GLA ++ H +
Sbjct: 297 YAA-EIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV- 351
Query: 467 VRGTVGHIAPEYLSTGQSSEKT-DVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
GT G++APE L G + + + D F G +L +L+ G +
Sbjct: 352 --GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHK-----------TKD 398
Query: 526 LHEERRLDVLIDRDLKGSFDPTELEKMVQLALQ 558
HE R+ + + +L SF P EL +++ LQ
Sbjct: 399 KHEIDRMTLTMAVELPDSFSP-ELRSLLEGLLQ 430
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 117/273 (42%), Gaps = 38/273 (13%)
Query: 298 LQIATGNFSPKNILGQGGYGVVYKGC-------LPNRMVVAVKRLKDPNFTGEVQFQTEV 350
+ + +FS I+G+GG+G VY GC + + KR+K GE E
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVY-GCRKADTGKMYAMKCLDKKRIKMKQ--GETLALNER 240
Query: 351 EMIGLALHRN----LLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRM 406
M+ L + + Y F TP++ + M G D Q + + R
Sbjct: 241 IMLSLVSTGDCPFIVCMSYAF-HTPDKLSFILDLMNGG---DLHYHLSQHGVFSEADMRF 296
Query: 407 HIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTA 466
+ A GL ++H N +++RD+K ANILLDE + D GLA ++ H +
Sbjct: 297 YAA-EIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV- 351
Query: 467 VRGTVGHIAPEYLSTGQSSEKT-DVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
GT G++APE L G + + + D F G +L +L+ G +
Sbjct: 352 --GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHK-----------TKD 398
Query: 526 LHEERRLDVLIDRDLKGSFDPTELEKMVQLALQ 558
HE R+ + + +L SF P EL +++ LQ
Sbjct: 399 KHEIDRMTLTMAVELPDSFSP-ELRSLLEGLLQ 430
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 98/213 (46%), Gaps = 19/213 (8%)
Query: 303 GNFSPKNILGQGGYGVV---YKGCLPNRMVVAV---KRLKDPNFTGEVQFQTEVEMIGLA 356
GN+ LG+G +G V Y ++ + + K L + G ++ E+ + L
Sbjct: 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLL 70
Query: 357 LHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGL 416
H ++++LY + +E ++V Y N ++ + ++ RR + +A +
Sbjct: 71 RHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQE---ARRFFQQIISA--V 125
Query: 417 LYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAP 476
Y H KI+HRD+K N+LLDE + DFGL+ ++ D + G+ + AP
Sbjct: 126 EYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKTSCGSPNYAAP 180
Query: 477 EYLSTG-QSSEKTDVFGFGVLLLELITGQKALD 508
E +S + + DV+ GV+L ++ + D
Sbjct: 181 EVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 213
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 98/213 (46%), Gaps = 19/213 (8%)
Query: 303 GNFSPKNILGQGGYGVV---YKGCLPNRMVVAV---KRLKDPNFTGEVQFQTEVEMIGLA 356
GN+ LG+G +G V Y ++ + + K L + G ++ E+ + L
Sbjct: 14 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLL 71
Query: 357 LHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGL 416
H ++++LY + +E ++V Y N ++ + ++ RR + +A +
Sbjct: 72 RHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQE---ARRFFQQIISA--V 126
Query: 417 LYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAP 476
Y H KI+HRD+K N+LLDE + DFGL+ ++ D + G+ + AP
Sbjct: 127 EYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKTSCGSPNYAAP 181
Query: 477 EYLSTG-QSSEKTDVFGFGVLLLELITGQKALD 508
E +S + + DV+ GV+L ++ + D
Sbjct: 182 EVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 214
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 125/279 (44%), Gaps = 31/279 (11%)
Query: 311 LGQGGYGVVYKGC-LPNR-MVVAVKRLKDPNFTGEVQFQTEVEMIGLA-----LHRNLLR 363
+G+G YG V+K L N VA+KR++ + T E+ L H N++R
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 364 LYGFCMTP----EERL-LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
L+ C E +L LV+ ++ + + L + P + + M L RGL +
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQL--LRGLDF 135
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEY 478
LH +++HRD+K NIL+ S + + DFGLA++ + T+V T+ + APE
Sbjct: 136 LHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ--MALTSVVVTLWYRAPEV 190
Query: 479 LSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQV-QKGMILDCVRTLHEER-RLDVLI 536
L + D++ G + E+ +K L G+ V Q G ILD + EE DV +
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVAL 249
Query: 537 DRDLKGSFDPTELEKMV--------QLALQCTQSHPNLR 567
R S +EK V L L+C +P R
Sbjct: 250 PRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKR 288
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 107/237 (45%), Gaps = 21/237 (8%)
Query: 304 NFSPKNILGQGGYGVVYKG--CLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNL 361
+++ ++G G +GVVY+ C +V K L+D F E++++ H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNI 75
Query: 362 LRL-YGFCMTPEERLLVY-----PYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARG 415
+RL Y F + E++ +VY Y+P +V R +AK L R
Sbjct: 76 VRLRYFFYSSGEKKDVVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 416 LLYLHEQCNPKIIHRDVKAANILLDESFEAV-VGDFGLAKLLDRRDSHVTTAVRGTVGHI 474
L Y+H I HRD+K N+LLD + + DFG AK L R + +V+ + +
Sbjct: 135 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYR 189
Query: 475 APEYL-STGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEER 530
APE + + DV+ G +L EL+ GQ +G Q I+ + T E+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 246
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 116/271 (42%), Gaps = 34/271 (12%)
Query: 298 LQIATGNFSPKNILGQGGYGVVYKGCLPNRM--VVAVKRLKDPNFT---GEVQFQTEVEM 352
+ + +FS I+G+GG+G VY GC + A+K L GE E M
Sbjct: 183 IHLTMNDFSVHRIIGRGGFGEVY-GCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM 241
Query: 353 IGLALHRN----LLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHI 408
+ L + + Y F TP++ + M G D Q + + R +
Sbjct: 242 LSLVSTGDCPFIVCMSYAF-HTPDKLSFILDLMNGG---DLHYHLSQHGVFSEADMRFYA 297
Query: 409 ALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVR 468
A GL ++H N +++RD+K ANILLDE + D GLA ++ H +
Sbjct: 298 A-EIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV--- 350
Query: 469 GTVGHIAPEYLSTGQSSEKT-DVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLH 527
GT G++APE L G + + + D F G +L +L+ G + H
Sbjct: 351 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHK-----------TKDKH 399
Query: 528 EERRLDVLIDRDLKGSFDPTELEKMVQLALQ 558
E R+ + + +L SF P EL +++ LQ
Sbjct: 400 EIDRMTLTMAVELPDSFSP-ELRSLLEGLLQ 429
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 117/271 (43%), Gaps = 34/271 (12%)
Query: 298 LQIATGNFSPKNILGQGGYGVVYKGCLPNRM--VVAVKRLKDPNFT---GEVQFQTEVEM 352
+ + +FS I+G+GG+G VY GC + A+K L GE E M
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVY-GCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM 242
Query: 353 IGLALHRN----LLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHI 408
+ L + + Y F TP++ + M G + L Q + + R +
Sbjct: 243 LSLVSTGDCPFIVCMSYAF-HTPDKLSFILDLMNGGDLHYHLS---QHGVFSEADMRFYA 298
Query: 409 ALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVR 468
A GL ++H N +++RD+K ANILLDE + D GLA ++ H +
Sbjct: 299 A-EIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV--- 351
Query: 469 GTVGHIAPEYLSTGQSSEKT-DVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLH 527
GT G++APE L G + + + D F G +L +L+ G + H
Sbjct: 352 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHK-----------TKDKH 400
Query: 528 EERRLDVLIDRDLKGSFDPTELEKMVQLALQ 558
E R+ + + +L SF P EL +++ LQ
Sbjct: 401 EIDRMTLTMAVELPDSFSP-ELRSLLEGLLQ 430
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 89/211 (42%), Gaps = 13/211 (6%)
Query: 304 NFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQ----FQTEVEMIGLALHR 359
+F ++G+G Y V L + R+ + + QTE + A +
Sbjct: 53 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNH 112
Query: 360 NLLRLYGFCMTPEERLL-VYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
L C E RL V Y+ G + ++ RQ K P + R + A L Y
Sbjct: 113 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ--RQRKLPEEHARFYSAEISLA--LNY 168
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEY 478
LHE+ II+RD+K N+LLD + D+G+ K R T+ GT +IAPE
Sbjct: 169 LHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGDTTSTFCGTPNYIAPEI 224
Query: 479 LSTGQSSEKTDVFGFGVLLLELITGQKALDV 509
L D + GVL+ E++ G+ D+
Sbjct: 225 LRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 255
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 98/213 (46%), Gaps = 19/213 (8%)
Query: 303 GNFSPKNILGQGGYGVV---YKGCLPNRMVVAV---KRLKDPNFTGEVQFQTEVEMIGLA 356
GN+ LG+G +G V Y ++ + + K L + G ++ E+ + L
Sbjct: 4 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLL 61
Query: 357 LHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGL 416
H ++++LY + +E ++V Y N ++ + ++ RR + +A +
Sbjct: 62 RHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSE---QEARRFFQQIISA--V 116
Query: 417 LYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAP 476
Y H KI+HRD+K N+LLDE + DFGL+ ++ D + G+ + AP
Sbjct: 117 EYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKTSCGSPNYAAP 171
Query: 477 EYLSTG-QSSEKTDVFGFGVLLLELITGQKALD 508
E +S + + DV+ GV+L ++ + D
Sbjct: 172 EVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 204
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 96/206 (46%), Gaps = 8/206 (3%)
Query: 303 GNFSPKNILGQGGYGVVYKG-CLPNRMVVAVKRLKDPNF---TGEVQFQTEVEMIGLALH 358
NF + +G+G + VY+ CL + + VA+K+++ + E++++ H
Sbjct: 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH 91
Query: 359 RNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
N+++ Y + E +V G ++ ++ ++ K + + L +
Sbjct: 92 PNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEH 151
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEY 478
+H + +++HRD+K AN+ + + +GD GL + + + + V GT +++PE
Sbjct: 152 MHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLV-GTPYYMSPER 207
Query: 479 LSTGQSSEKTDVFGFGVLLLELITGQ 504
+ + K+D++ G LL E+ Q
Sbjct: 208 IHENGYNFKSDIWSLGCLLYEMAALQ 233
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 95/199 (47%), Gaps = 18/199 (9%)
Query: 311 LGQGGYGVVYKGCLPNR-MVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCM 369
+G+G G+V + + +VAVK++ EV ++ H N++ +Y +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 370 TPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIH 429
+E +V ++ G++ D + TR ++ + + L + L LH Q +IH
Sbjct: 142 VGDELWVVMEFLEGGALTDIVTHTR-----MNEEQIAAVCLAVLQALSVLHAQG---VIH 193
Query: 430 RDVKAANILLDESFEAVVGDFG----LAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSS 485
RD+K+ +ILL + DFG ++K + RR V GT +APE +S
Sbjct: 194 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-----GTPYWMAPELISRLPYG 248
Query: 486 EKTDVFGFGVLLLELITGQ 504
+ D++ G++++E++ G+
Sbjct: 249 PEVDIWSLGIMVIEMVDGE 267
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 122/284 (42%), Gaps = 43/284 (15%)
Query: 311 LGQGGYGVVYKG------CLPNRMVVAVKRLKDPNFTGEVQ-FQTEVE-MIGLALHRNLL 362
LG+G +G V + VAVK LK+ E + +E++ +I + H N++
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 363 RLYGFCMTPEERLLVY-PYMPNGSVADCLRDTRQA----KPPLDWNRRM----HI---AL 410
L G C P L+V + G+++ LR R K P D + H+ +
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 411 GTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTA-VRG 469
A+G+ +L + K IHRD+ A NILL E + DFGLA+ + + V R
Sbjct: 156 QVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 470 TVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILD--CVRTLH 527
+ +APE + + ++DV+ FGVLL E+ + G+ +D R L
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRLK 265
Query: 528 EERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
E R+ + D T E M Q L C P+ RP S
Sbjct: 266 EGTRMR---------APDYTTPE-MYQTMLDCWHGEPSQRPTFS 299
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 98/213 (46%), Gaps = 19/213 (8%)
Query: 303 GNFSPKNILGQGGYGVV---YKGCLPNRMVVAV---KRLKDPNFTGEVQFQTEVEMIGLA 356
GN+ LG+G +G V Y ++ + + K L + G ++ E+ + L
Sbjct: 8 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLL 65
Query: 357 LHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGL 416
H ++++LY + +E ++V Y N ++ + ++ RR + +A +
Sbjct: 66 RHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSE---QEARRFFQQIISA--V 120
Query: 417 LYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAP 476
Y H KI+HRD+K N+LLDE + DFGL+ ++ D + G+ + AP
Sbjct: 121 EYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM--TDGNFLKTSCGSPNYAAP 175
Query: 477 EYLSTG-QSSEKTDVFGFGVLLLELITGQKALD 508
E +S + + DV+ GV+L ++ + D
Sbjct: 176 EVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 208
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 64/126 (50%), Gaps = 11/126 (8%)
Query: 384 GSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESF 443
G+ A+ L+ Q P +M +A+ + L YL E+ +IHRDVK +NILLDE
Sbjct: 107 GTCAEKLKKRMQGPIPERILGKMTVAI--VKALYYLKEKHG--VIHRDVKPSNILLDERG 162
Query: 444 EAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSE-----KTDVFGFGVLLL 498
+ + DFG++ L D G ++APE + ++ + DV+ G+ L+
Sbjct: 163 QIKLCDFGISGRL--VDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLV 220
Query: 499 ELITGQ 504
EL TGQ
Sbjct: 221 ELATGQ 226
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 122/285 (42%), Gaps = 44/285 (15%)
Query: 311 LGQGGYGVVYKG------CLPNRMVVAVKRLKDPNFTGEVQ-FQTEVE-MIGLALHRNLL 362
LG+G +G V + VAVK LK+ E + +E++ +I + H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 363 RLYGFCMTPEERLLVY-PYMPNGSVADCLRDTRQAKPPL---------DWNRRMHI---A 409
L G C P L+V + G+++ LR R P D+ H+ +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 410 LGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTA-VR 468
A+G+ +L + K IHRD+ A NILL E + DFGLA+ + + +V R
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 469 GTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILD--CVRTL 526
+ +APE + + ++DV+ FGVLL E+ + G+ +D R L
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRL 255
Query: 527 HEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
E R+ + D T E M Q L C P+ RP S
Sbjct: 256 KEGTRMR---------APDYTTPE-MYQTMLDCWHGEPSQRPTFS 290
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 125/279 (44%), Gaps = 31/279 (11%)
Query: 311 LGQGGYGVVYKGC-LPNR-MVVAVKRLKDPNFTGEVQFQTEVEMIGLA-----LHRNLLR 363
+G+G YG V+K L N VA+KR++ + T E+ L H N++R
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 364 LYGFCMTP----EERL-LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
L+ C E +L LV+ ++ + + L + P + + M L RGL +
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQL--LRGLDF 135
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEY 478
LH +++HRD+K NIL+ S + + DFGLA++ + T+V T+ + APE
Sbjct: 136 LHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ--MALTSVVVTLWYRAPEV 190
Query: 479 LSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQV-QKGMILDCVRTLHEER-RLDVLI 536
L + D++ G + E+ +K L G+ V Q G ILD + EE DV +
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVAL 249
Query: 537 DRDLKGSFDPTELEKMV--------QLALQCTQSHPNLR 567
R S +EK V L L+C +P R
Sbjct: 250 PRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKR 288
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 94/220 (42%), Gaps = 22/220 (10%)
Query: 296 RELQIATGNFSPKNILGQGGYGVV----YKGCLPNRMVVAVKRLKDPNF---TGEVQFQT 348
R+L++ ++ ++G+G +G V +K R V A+K L + F
Sbjct: 67 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKST---RKVYAMKLLSKFEMIKRSDSAFFWE 123
Query: 349 EVEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHI 408
E +++ A +++L+ +V YMP G + + + + P W R
Sbjct: 124 ERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNY---DVPEKWAR---- 176
Query: 409 ALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVR 468
TA +L L + IHRDVK N+LLD+S + DFG +++
Sbjct: 177 -FYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV 235
Query: 469 GTVGHIAPEYLST----GQSSEKTDVFGFGVLLLELITGQ 504
GT +I+PE L + G + D + GV L E++ G
Sbjct: 236 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGD 275
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 94/220 (42%), Gaps = 22/220 (10%)
Query: 296 RELQIATGNFSPKNILGQGGYGVV----YKGCLPNRMVVAVKRLKDPNF---TGEVQFQT 348
R+L++ ++ ++G+G +G V +K R V A+K L + F
Sbjct: 67 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKST---RKVYAMKLLSKFEMIKRSDSAFFWE 123
Query: 349 EVEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHI 408
E +++ A +++L+ +V YMP G + + + + P W R
Sbjct: 124 ERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNY---DVPEKWAR---- 176
Query: 409 ALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVR 468
TA +L L + IHRDVK N+LLD+S + DFG +++
Sbjct: 177 -FYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV 235
Query: 469 GTVGHIAPEYLST----GQSSEKTDVFGFGVLLLELITGQ 504
GT +I+PE L + G + D + GV L E++ G
Sbjct: 236 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGD 275
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 22/210 (10%)
Query: 304 NFSPKNILGQGGYGVVY-----KGCLPNRMVVAVKRLKDPNFT--GEVQFQTEVEMIGLA 356
F +LGQG +G V+ G R + A+K LK V+ + E +++
Sbjct: 26 QFELLKVLGQGSFGKVFLVKKISGS-DARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 84
Query: 357 LHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGT-ARG 415
H +++L+ T + L+ ++ G + TR +K + + L A
Sbjct: 85 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLF-----TRLSKEVMFTEEDVKFYLAELALA 139
Query: 416 LLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVR--GTVGH 473
L +LH II+RD+K NILLDE + DFGL+K H A GTV +
Sbjct: 140 LDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVEY 193
Query: 474 IAPEYLSTGQSSEKTDVFGFGVLLLELITG 503
+APE ++ ++ D + FGVL+ E++TG
Sbjct: 194 MAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 22/210 (10%)
Query: 304 NFSPKNILGQGGYGVVY-----KGCLPNRMVVAVKRLKDPNFT--GEVQFQTEVEMIGLA 356
F +LGQG +G V+ G R + A+K LK V+ + E +++
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGS-DARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 357 LHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGT-ARG 415
H +++L+ T + L+ ++ G + TR +K + + L A
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLF-----TRLSKEVMFTEEDVKFYLAELALA 138
Query: 416 LLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVR--GTVGH 473
L +LH II+RD+K NILLDE + DFGL+K H A GTV +
Sbjct: 139 LDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVEY 192
Query: 474 IAPEYLSTGQSSEKTDVFGFGVLLLELITG 503
+APE ++ ++ D + FGVL+ E++TG
Sbjct: 193 MAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 96/217 (44%), Gaps = 24/217 (11%)
Query: 291 KRFSFRELQIATGNFSPKNILGQGGYGVVYK-GCLPNRMVVAVKRLKDPNFTGEVQFQTE 349
K F F+E + TG FS + + G ++ C+P + + E + E
Sbjct: 22 KIFEFKET-LGTGAFSEVVLAEEKATGKLFAVKCIPKKALKG----------KESSIENE 70
Query: 350 VEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIA 409
+ ++ H N++ L +P LV + G + D + + + D + +
Sbjct: 71 IAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVE-KGFYTEKDASTLIRQV 129
Query: 410 LGTARGLLYLHEQCNPKIIHRDVKAANILL---DESFEAVVGDFGLAKLLDRRDSHVTTA 466
L + YLH I+HRD+K N+L DE + ++ DFGL+K+ + D V +
Sbjct: 130 LD---AVYYLHRMG---IVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD--VMST 181
Query: 467 VRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITG 503
GT G++APE L+ S+ D + GV+ L+ G
Sbjct: 182 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 122/285 (42%), Gaps = 44/285 (15%)
Query: 311 LGQGGYGVVYKG------CLPNRMVVAVKRLKDPNFTGEVQ-FQTEVE-MIGLALHRNLL 362
LG+G +G V + VAVK LK+ E + +E++ +I + H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 363 RLYGFCMTPEERLLVY-PYMPNGSVADCLRDTRQAKPPL---------DWNRRMHI---A 409
L G C P L+V + G+++ LR R P D+ H+ +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 410 LGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTA-VR 468
A+G+ +L + K IHRD+ A NILL E + DFGLA+ + + +V R
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 469 GTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILD--CVRTL 526
+ +APE + + ++DV+ FGVLL E+ + G+ +D R L
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRL 255
Query: 527 HEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
E R+ + D T E M Q L C P+ RP S
Sbjct: 256 KEGTRMR---------APDYTTPE-MYQTMLDCWHGEPSQRPTFS 290
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 94/220 (42%), Gaps = 22/220 (10%)
Query: 296 RELQIATGNFSPKNILGQGGYGVV----YKGCLPNRMVVAVKRLKDPNF---TGEVQFQT 348
R+L++ ++ ++G+G +G V +K R V A+K L + F
Sbjct: 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKST---RKVYAMKLLSKFEMIKRSDSAFFWE 118
Query: 349 EVEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHI 408
E +++ A +++L+ +V YMP G + + + + P W R
Sbjct: 119 ERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNY---DVPEKWAR---- 171
Query: 409 ALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVR 468
TA +L L + IHRDVK N+LLD+S + DFG +++
Sbjct: 172 -FYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV 230
Query: 469 GTVGHIAPEYLST----GQSSEKTDVFGFGVLLLELITGQ 504
GT +I+PE L + G + D + GV L E++ G
Sbjct: 231 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGD 270
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 94/211 (44%), Gaps = 13/211 (6%)
Query: 304 NFSPKNILGQGGYGVVYKGCLPN-RMVVAVKRLKDP--NFTGEVQF-QTEVEMIGLALHR 359
+F ++G+G Y V L + A+K +K N ++ + QTE + A +
Sbjct: 21 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 80
Query: 360 NLLRLYGFCMTPEERLL-VYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
L C E RL V Y+ G + ++ RQ K P + R + A L Y
Sbjct: 81 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ--RQRKLPEEHARFYSAEISLA--LNY 136
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEY 478
LHE+ II+RD+K N+LLD + D+G+ K R T+ GT +IAPE
Sbjct: 137 LHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGDTTSXFCGTPNYIAPEI 192
Query: 479 LSTGQSSEKTDVFGFGVLLLELITGQKALDV 509
L D + GVL+ E++ G+ D+
Sbjct: 193 LRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 223
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 122/285 (42%), Gaps = 44/285 (15%)
Query: 311 LGQGGYGVVYKG------CLPNRMVVAVKRLKDPNFTGEVQ-FQTEVE-MIGLALHRNLL 362
LG+G +G V + VAVK LK+ E + +E++ +I + H N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 363 RLYGFCMTPEERLLVY-PYMPNGSVADCLRDTRQAKPPL---------DWNRRMHI---A 409
L G C P L+V + G+++ LR R P D+ H+ +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 410 LGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTA-VR 468
A+G+ +L + K IHRD+ A NILL E + DFGLA+ + + +V R
Sbjct: 157 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 213
Query: 469 GTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILD--CVRTL 526
+ +APE + + ++DV+ FGVLL E+ + G+ +D R L
Sbjct: 214 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRL 266
Query: 527 HEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
E R+ + D T E M Q L C P+ RP S
Sbjct: 267 KEGTRMR---------APDYTTPE-MYQTMLDCWHGEPSQRPTFS 301
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 122/285 (42%), Gaps = 44/285 (15%)
Query: 311 LGQGGYGVVYKG------CLPNRMVVAVKRLKDPNFTGEVQ-FQTEVE-MIGLALHRNLL 362
LG+G +G V + VAVK LK+ E + +E++ +I + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 363 RLYGFCMTPEERLLVY-PYMPNGSVADCLRDTRQAKPPL---------DWNRRMHI---A 409
L G C P L+V + G+++ LR R P D+ H+ +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 410 LGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTA-VR 468
A+G+ +L + K IHRD+ A NILL E + DFGLA+ + + +V R
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 211
Query: 469 GTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILD--CVRTL 526
+ +APE + + ++DV+ FGVLL E+ + G+ +D R L
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRL 264
Query: 527 HEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
E R+ + D T E M Q L C P+ RP S
Sbjct: 265 KEGTRMR---------APDYTTPE-MYQTMLDCWHGEPSQRPTFS 299
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 101/224 (45%), Gaps = 22/224 (9%)
Query: 309 NILGQGGYGVVY-----KGCLPNRMVVAVKRLKDPNFT--GEVQFQTEVEMIGLALHRNL 361
+LGQG +G V+ G R + A+K LK V+ + E +++ H +
Sbjct: 30 KVLGQGSFGKVFLVKKISGS-DARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFI 88
Query: 362 LRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGT-ARGLLYLH 420
++L+ T + L+ ++ G + TR +K + + L A L +LH
Sbjct: 89 VKLHYAFQTEGKLYLILDFLRGGDLF-----TRLSKEVMFTEEDVKFYLAELALALDHLH 143
Query: 421 EQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVR--GTVGHIAPEY 478
II+RD+K NILLDE + DFGL+K H A GTV ++APE
Sbjct: 144 SLG---IIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVEYMAPEV 197
Query: 479 LSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDC 522
++ ++ D + FGVL+ E++TG + + MIL
Sbjct: 198 VNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA 241
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 90/198 (45%), Gaps = 16/198 (8%)
Query: 311 LGQGGYGVVYKGCLPNRM----VVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYG 366
+G+G G+V CL VAVK + EV ++ H N++ +Y
Sbjct: 53 IGEGSTGIV---CLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYK 109
Query: 367 FCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPK 426
+ EE ++ ++ G++ D + R L+ + + + L YLH Q
Sbjct: 110 SYLVGEELWVLMEFLQGGALTDIVSQVR-----LNEEQIATVCEAVLQALAYLHAQ---G 161
Query: 427 IIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSE 486
+IHRD+K+ +ILL + DFG + + D + GT +APE +S +
Sbjct: 162 VIHRDIKSDSILLTLDGRVKLSDFGFCAQISK-DVPKRKXLVGTPYWMAPEVISRSLYAT 220
Query: 487 KTDVFGFGVLLLELITGQ 504
+ D++ G++++E++ G+
Sbjct: 221 EVDIWSLGIMVIEMVDGE 238
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 122/285 (42%), Gaps = 44/285 (15%)
Query: 311 LGQGGYGVVYKG------CLPNRMVVAVKRLKDPNFTGEVQ-FQTEVE-MIGLALHRNLL 362
LG+G +G V + VAVK LK+ E + +E++ +I + H N++
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 363 RLYGFCMTPEERLLVY-PYMPNGSVADCLRDTRQAKPPL---------DWNRRMHI---A 409
L G C P L+V + G+++ LR R P D+ H+ +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 410 LGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTA-VR 468
A+G+ +L + K IHRD+ A NILL E + DFGLA+ + + +V R
Sbjct: 192 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 248
Query: 469 GTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILD--CVRTL 526
+ +APE + + ++DV+ FGVLL E+ + G+ +D R L
Sbjct: 249 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRL 301
Query: 527 HEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
E R+ + D T E M Q L C P+ RP S
Sbjct: 302 KEGTRMR---------APDYTTPE-MYQTMLDCWHGEPSQRPTFS 336
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 74/164 (45%), Gaps = 9/164 (5%)
Query: 347 QTEVEMIGLALHRNLLRLYGFCMTPEERLL-VYPYMPNGSVADCLRDTRQAKPPLDWNRR 405
QTE + A + L C E RL V Y+ G + ++ RQ K P + R
Sbjct: 53 QTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ--RQRKLPEEHARF 110
Query: 406 MHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTT 465
+ A L YLHE+ II+RD+K N+LLD + D+G+ K R T+
Sbjct: 111 YSAEISLA--LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGDTTS 164
Query: 466 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDV 509
GT +IAPE L D + GVL+ E++ G+ D+
Sbjct: 165 XFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 208
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 123/289 (42%), Gaps = 38/289 (13%)
Query: 300 IATGNFSPKNILGQGGYGVVYKGCLPNR----MVVAVKRLK-DPNFTGEVQ-FQTEVEMI 353
I F+ +LG+G +G V + L + VAVK LK D + +++ F E +
Sbjct: 20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACM 79
Query: 354 GLALHRNLLRLYGFCMTPEER------LLVYPYMPNGSVADCLRDTRQAKPP--LDWNRR 405
H ++ +L G + + +++ P+M +G + L +R + P L
Sbjct: 80 KEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTL 139
Query: 406 MHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVT- 464
+ + A G+ YL + IHRD+ A N +L E V DFGL++ + D +
Sbjct: 140 VRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQG 196
Query: 465 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKAL-DVGNGQVQKGMILDC 522
A + V +A E L+ + +DV+ FGV + E++T GQ + N ++ +I
Sbjct: 197 CASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLI--- 253
Query: 523 VRTLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
RL P +E++ L QC + P RP +
Sbjct: 254 -----GGNRLKQ----------PPECMEEVYDLMYQCWSADPKQRPSFT 287
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 74/164 (45%), Gaps = 9/164 (5%)
Query: 347 QTEVEMIGLALHRNLLRLYGFCMTPEERLL-VYPYMPNGSVADCLRDTRQAKPPLDWNRR 405
QTE + A + L C E RL V Y+ G + ++ RQ K P + R
Sbjct: 57 QTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ--RQRKLPEEHARF 114
Query: 406 MHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTT 465
+ A L YLHE+ II+RD+K N+LLD + D+G+ K R T+
Sbjct: 115 YSAEISLA--LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGDTTS 168
Query: 466 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDV 509
GT +IAPE L D + GVL+ E++ G+ D+
Sbjct: 169 XFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 212
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 103/242 (42%), Gaps = 27/242 (11%)
Query: 311 LGQGGYGVVYKGCLP-NRMVVAVKRLKDPNFTGE-VQFQTEVEMIGLALHRNLLRLYGFC 368
LG+G Y VYKG +VA+K ++ + G EV ++ H N++ L+
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII 69
Query: 369 MTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMH----IALGTARGLLYLHEQCN 424
T + LV+ Y+ +D +Q MH RGL Y H Q
Sbjct: 70 HTEKSLTLVFEYLD--------KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ-- 119
Query: 425 PKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRG----TVGHIAPE-YL 479
K++HRD+K N+L++E E + DFGLA R + T T+ + P+ L
Sbjct: 120 -KVLHRDLKPQNLLINERGELKLADFGLA-----RAKSIPTKTYDNEVVTLWYRPPDILL 173
Query: 480 STGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDRD 539
+ S + D++G G + E+ TG+ + Q I + T EE +L + +
Sbjct: 174 GSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEE 233
Query: 540 LK 541
K
Sbjct: 234 FK 235
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 300 IATGNFSPKNILGQGGYGVVY--KGCLPNR----MVVAVKRLKDPNFTGEVQFQTEVEMI 353
I + + + +LG+G +G V K + + V++ +++K T + EV+++
Sbjct: 23 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQK--TDKESLLREVQLL 80
Query: 354 GLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTA 413
H N+++LY F LV G + D + +R+ +D R + L
Sbjct: 81 KQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII-SRKRFSEVDAARIIRQVLS-- 137
Query: 414 RGLLYLHEQCNPKIIHRDVKAANILLDESFEAV---VGDFGLAKLLDRRDSHVTTAVRGT 470
G+ Y+H+ KI+HRD+K N+LL+ + + DFGL+ + S GT
Sbjct: 138 -GITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA--SKKMKDKIGT 191
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLELITG 503
+IAPE L G EK DV+ GV+L L++G
Sbjct: 192 AYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 223
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 105/239 (43%), Gaps = 25/239 (10%)
Query: 304 NFSPKNILGQGGYGVVYKG--CLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNL 361
+++ ++G G +GVVY+ C +V K L+D F E++++ H N+
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNI 109
Query: 362 LRLYGFCMTPEERL------LVYPYMPNG--SVADCLRDTRQAKPPLDWNRRMHIALGTA 413
+RL F + E+ LV Y+P VA +Q P + M+
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF--- 166
Query: 414 RGLLYLHEQCNPKIIHRDVKAANILLDESFEAV-VGDFGLAKLLDRRDSHVTTAVRGTVG 472
R L Y+H I HRD+K N+LLD + + DFG AK L R + +V+ +
Sbjct: 167 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRY 221
Query: 473 HIAPEYL-STGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEER 530
+ APE + + DV+ G +L EL+ GQ +G Q I+ + T E+
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 280
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 115/278 (41%), Gaps = 29/278 (10%)
Query: 310 ILGQGGYGVVYKGCLPNRM--VVAVKRL---KDPNFTGEVQFQTEVEMIGLALHRNLLRL 364
++G+G YG+V K C +VA+K+ D ++ + E++++ H NL+ L
Sbjct: 32 LVGEGSYGMVMK-CRNKDTGRIVAIKKFLESDDDKMVKKIAMR-EIKLLKQLRHENLVNL 89
Query: 365 YGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCN 424
C + LV+ ++ + L D LD+ G+ + H
Sbjct: 90 LEVCKKKKRWYLVFEFVDHT----ILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSH-- 143
Query: 425 PKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYL-STGQ 483
IIHRD+K NIL+ +S + DFG A+ L V T + APE L +
Sbjct: 144 -NIIHRDIKPENILVSQSGVVKLCDFGFARTL-AAPGEVYDDEVATRWYRAPELLVGDVK 201
Query: 484 SSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTL---HEER---------- 530
+ DV+ G L+ E+ G+ + Q I+ C+ L H+E
Sbjct: 202 YGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGV 261
Query: 531 RLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRP 568
RL + +R+ P E ++ LA +C P+ RP
Sbjct: 262 RLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRP 299
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 19/207 (9%)
Query: 310 ILGQGGYGVVYKGCLPNRM----VVAVKRLKDPNFTGEVQFQ-TEVEMIGLALHRN---L 361
+LG+G +G V L R + AVK LK + + T VE LAL L
Sbjct: 348 VLGKGSFGKVM---LSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFL 404
Query: 362 LRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHE 421
+L+ T + V Y+ G + ++ + K P + A A GL +L
Sbjct: 405 TQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEP----HAVFYAAEIAIGLFFLQS 460
Query: 422 QCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLST 481
+ II+RD+K N++LD + DFG+ K + D T GT +IAPE ++
Sbjct: 461 K---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE-NIWDGVTTKXFCGTPDYIAPEIIAY 516
Query: 482 GQSSEKTDVFGFGVLLLELITGQKALD 508
+ D + FGVLL E++ GQ +
Sbjct: 517 QPYGKSVDWWAFGVLLYEMLAGQAPFE 543
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 104/237 (43%), Gaps = 21/237 (8%)
Query: 304 NFSPKNILGQGGYGVVYKG--CLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNL 361
+++ ++G G +GVVY+ C +V K L+D F E++++ H N+
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNI 79
Query: 362 LRLYGFCMTPEERL------LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARG 415
+RL F + E+ LV Y+P +V R +AK L R
Sbjct: 80 VRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 138
Query: 416 LLYLHEQCNPKIIHRDVKAANILLDESFEAV-VGDFGLAKLLDRRDSHVTTAVRGTVGHI 474
L Y+H I HRD+K N+LLD + + DFG AK L R + +V+ + +
Sbjct: 139 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYR 193
Query: 475 APEYL-STGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEER 530
APE + + DV+ G +L EL+ GQ +G Q I+ + T E+
Sbjct: 194 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 250
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 121/285 (42%), Gaps = 44/285 (15%)
Query: 311 LGQGGYGVVYKG------CLPNRMVVAVKRLKDPNFTGEVQ-FQTEVE-MIGLALHRNLL 362
LG+G +G V + VAVK LK+ E + +E++ +I + H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 363 RLYGFCMTPEERLLVY-PYMPNGSVADCLRDTRQAKPPL---------DWNRRMHI---A 409
L G C P L+V + G+++ LR R P D+ H+ +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 410 LGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTA-VR 468
A+G+ +L + K IHRD+ A NILL E + DFGLA+ + + V R
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 469 GTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILD--CVRTL 526
+ +APE + + ++DV+ FGVLL E+ + G+ +D R L
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRL 255
Query: 527 HEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
E R+ + D T E M Q L C P+ RP S
Sbjct: 256 KEGTRMR---------APDYTTPE-MYQTMLDCWHGEPSQRPTFS 290
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 104/237 (43%), Gaps = 21/237 (8%)
Query: 304 NFSPKNILGQGGYGVVYKG--CLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNL 361
+++ ++G G +GVVY+ C +V K L+D F E++++ H N+
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNI 76
Query: 362 LRLYGFCMTPEERL------LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARG 415
+RL F + E+ LV Y+P +V R +AK L R
Sbjct: 77 VRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 135
Query: 416 LLYLHEQCNPKIIHRDVKAANILLDESFEAV-VGDFGLAKLLDRRDSHVTTAVRGTVGHI 474
L Y+H I HRD+K N+LLD + + DFG AK L R + +V+ + +
Sbjct: 136 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYR 190
Query: 475 APEYL-STGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEER 530
APE + + DV+ G +L EL+ GQ +G Q I+ + T E+
Sbjct: 191 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 247
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 104/237 (43%), Gaps = 21/237 (8%)
Query: 304 NFSPKNILGQGGYGVVYKG--CLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNL 361
+++ ++G G +GVVY+ C +V K L+D F E++++ H N+
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNI 87
Query: 362 LRLYGFCMTPEERL------LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARG 415
+RL F + E+ LV Y+P +V R +AK L R
Sbjct: 88 VRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 146
Query: 416 LLYLHEQCNPKIIHRDVKAANILLDESFEAV-VGDFGLAKLLDRRDSHVTTAVRGTVGHI 474
L Y+H I HRD+K N+LLD + + DFG AK L R + +V+ + +
Sbjct: 147 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYR 201
Query: 475 APEYL-STGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEER 530
APE + + DV+ G +L EL+ GQ +G Q I+ + T E+
Sbjct: 202 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 258
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 121/285 (42%), Gaps = 44/285 (15%)
Query: 311 LGQGGYGVVYKG------CLPNRMVVAVKRLKDPNFTGEVQ-FQTEVE-MIGLALHRNLL 362
LG+G +G V + VAVK LK+ E + +E++ +I + H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 363 RLYGFCMTPEERLLVY-PYMPNGSVADCLRDTRQAKPPL---------DWNRRMHI---A 409
L G C P L+V + G+++ LR R P D+ H+ +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 410 LGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTA-VR 468
A+G+ +L + K IHRD+ A NILL E + DFGLA+ + + V R
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 469 GTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILD--CVRTL 526
+ +APE + + ++DV+ FGVLL E+ + G+ +D R L
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRL 255
Query: 527 HEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
E R+ + D T E M Q L C P+ RP S
Sbjct: 256 KEGTRMR---------APDYTTPE-MYQTMLDCWHGEPSQRPTFS 290
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 104/237 (43%), Gaps = 21/237 (8%)
Query: 304 NFSPKNILGQGGYGVVYKG--CLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNL 361
+++ ++G G +GVVY+ C +V K L+D F E++++ H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNI 75
Query: 362 LRLYGFCMTPEERL------LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARG 415
+RL F + E+ LV Y+P +V R +AK L R
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 416 LLYLHEQCNPKIIHRDVKAANILLDESFEAV-VGDFGLAKLLDRRDSHVTTAVRGTVGHI 474
L Y+H I HRD+K N+LLD + + DFG AK L R + +V+ + +
Sbjct: 135 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYR 189
Query: 475 APEYL-STGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEER 530
APE + + DV+ G +L EL+ GQ +G Q I+ + T E+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 246
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 104/237 (43%), Gaps = 21/237 (8%)
Query: 304 NFSPKNILGQGGYGVVYKG--CLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNL 361
+++ ++G G +GVVY+ C +V K L+D F E++++ H N+
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNI 83
Query: 362 LRLYGFCMTPEERL------LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARG 415
+RL F + E+ LV Y+P +V R +AK L R
Sbjct: 84 VRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 142
Query: 416 LLYLHEQCNPKIIHRDVKAANILLDESFEAV-VGDFGLAKLLDRRDSHVTTAVRGTVGHI 474
L Y+H I HRD+K N+LLD + + DFG AK L R + +V+ + +
Sbjct: 143 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYR 197
Query: 475 APEYL-STGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEER 530
APE + + DV+ G +L EL+ GQ +G Q I+ + T E+
Sbjct: 198 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 254
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 105/239 (43%), Gaps = 25/239 (10%)
Query: 304 NFSPKNILGQGGYGVVYKG--CLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNL 361
+++ ++G G +GVVY+ C +V K L+D F E++++ H N+
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNI 103
Query: 362 LRLYGFCMTPEERL------LVYPYMPNG--SVADCLRDTRQAKPPLDWNRRMHIALGTA 413
+RL F + E+ LV Y+P VA +Q P + M+
Sbjct: 104 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF--- 160
Query: 414 RGLLYLHEQCNPKIIHRDVKAANILLDESFEAV-VGDFGLAKLLDRRDSHVTTAVRGTVG 472
R L Y+H I HRD+K N+LLD + + DFG AK L R + +V+ +
Sbjct: 161 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRY 215
Query: 473 HIAPEYL-STGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEER 530
+ APE + + DV+ G +L EL+ GQ +G Q I+ + T E+
Sbjct: 216 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 274
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 105/239 (43%), Gaps = 25/239 (10%)
Query: 304 NFSPKNILGQGGYGVVYKG--CLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNL 361
+++ ++G G +GVVY+ C +V K L+D F E++++ H N+
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNI 154
Query: 362 LRLYGFCMTPEERL------LVYPYMPNG--SVADCLRDTRQAKPPLDWNRRMHIALGTA 413
+RL F + E+ LV Y+P VA +Q P + M+
Sbjct: 155 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF--- 211
Query: 414 RGLLYLHEQCNPKIIHRDVKAANILLDESFEAV-VGDFGLAKLLDRRDSHVTTAVRGTVG 472
R L Y+H I HRD+K N+LLD + + DFG AK L R + +V+ +
Sbjct: 212 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRY 266
Query: 473 HIAPEYL-STGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEER 530
+ APE + + DV+ G +L EL+ GQ +G Q I+ + T E+
Sbjct: 267 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 325
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 104/237 (43%), Gaps = 21/237 (8%)
Query: 304 NFSPKNILGQGGYGVVYKG--CLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNL 361
+++ ++G G +GVVY+ C +V K L+D F E++++ H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNI 75
Query: 362 LRLYGFCMTPEERL------LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARG 415
+RL F + E+ LV Y+P +V R +AK L R
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 416 LLYLHEQCNPKIIHRDVKAANILLDESFEAV-VGDFGLAKLLDRRDSHVTTAVRGTVGHI 474
L Y+H I HRD+K N+LLD + + DFG AK L R + +V+ + +
Sbjct: 135 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYR 189
Query: 475 APEYL-STGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEER 530
APE + + DV+ G +L EL+ GQ +G Q I+ + T E+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 246
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 121/285 (42%), Gaps = 44/285 (15%)
Query: 311 LGQGGYGVVYKG------CLPNRMVVAVKRLKDPNFTGEVQ-FQTEVE-MIGLALHRNLL 362
LG+G +G V + VAVK LK+ E + +E++ +I + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 363 RLYGFCMTPEERLLVY-PYMPNGSVADCLRDTRQAKPPL---------DWNRRMHI---A 409
L G C P L+V + G+++ LR R P D+ H+ +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 410 LGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTA-VR 468
A+G+ +L + K IHRD+ A NILL E + DFGLA+ + + V R
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 469 GTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILD--CVRTL 526
+ +APE + + ++DV+ FGVLL E+ + G+ +D R L
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRL 264
Query: 527 HEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
E R+ + D T E M Q L C P+ RP S
Sbjct: 265 KEGTRMR---------APDYTTPE-MYQTMLDCWHGEPSQRPTFS 299
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 104/237 (43%), Gaps = 21/237 (8%)
Query: 304 NFSPKNILGQGGYGVVYKG--CLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNL 361
+++ ++G G +GVVY+ C +V K L+D F E++++ H N+
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNI 94
Query: 362 LRLYGFCMTPEERL------LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARG 415
+RL F + E+ LV Y+P +V R +AK L R
Sbjct: 95 VRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 153
Query: 416 LLYLHEQCNPKIIHRDVKAANILLDESFEAV-VGDFGLAKLLDRRDSHVTTAVRGTVGHI 474
L Y+H I HRD+K N+LLD + + DFG AK L R + +V+ + +
Sbjct: 154 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYR 208
Query: 475 APEYL-STGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEER 530
APE + + DV+ G +L EL+ GQ +G Q I+ + T E+
Sbjct: 209 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 265
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 104/237 (43%), Gaps = 21/237 (8%)
Query: 304 NFSPKNILGQGGYGVVYKG--CLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNL 361
+++ ++G G +GVVY+ C +V K L+D F E++++ H N+
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNI 80
Query: 362 LRLYGFCMTPEERL------LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARG 415
+RL F + E+ LV Y+P +V R +AK L R
Sbjct: 81 VRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 139
Query: 416 LLYLHEQCNPKIIHRDVKAANILLDESFEAV-VGDFGLAKLLDRRDSHVTTAVRGTVGHI 474
L Y+H I HRD+K N+LLD + + DFG AK L R + +V+ + +
Sbjct: 140 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYYR 194
Query: 475 APEYL-STGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEER 530
APE + + DV+ G +L EL+ GQ +G Q I+ + T E+
Sbjct: 195 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 251
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 19/207 (9%)
Query: 310 ILGQGGYGVVYKGCLPNRM----VVAVKRLKDPNFTGEVQFQ-TEVEMIGLALHRN---L 361
+LG+G +G V L R + AVK LK + + T VE LAL L
Sbjct: 27 VLGKGSFGKV---MLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFL 83
Query: 362 LRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHE 421
+L+ T + V Y+ G + ++ + K P + A A GL +L
Sbjct: 84 TQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEP----HAVFYAAEIAIGLFFLQS 139
Query: 422 QCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLST 481
+ II+RD+K N++LD + DFG+ K + D T GT +IAPE ++
Sbjct: 140 K---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE-NIWDGVTTKXFCGTPDYIAPEIIAY 195
Query: 482 GQSSEKTDVFGFGVLLLELITGQKALD 508
+ D + FGVLL E++ GQ +
Sbjct: 196 QPYGKSVDWWAFGVLLYEMLAGQAPFE 222
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 300 IATGNFSPKNILGQGGYGVVY--KGCLPNR----MVVAVKRLKDPNFTGEVQFQTEVEMI 353
I + + + +LG+G +G V K + + V++ +++K T + EV+++
Sbjct: 46 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQK--TDKESLLREVQLL 103
Query: 354 GLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTA 413
H N+++LY F LV G + D + +R+ +D R + L
Sbjct: 104 KQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII-SRKRFSEVDAARIIRQVLS-- 160
Query: 414 RGLLYLHEQCNPKIIHRDVKAANILLDESFEAV---VGDFGLAKLLDRRDSHVTTAVRGT 470
G+ Y+H+ KI+HRD+K N+LL+ + + DFGL+ + S GT
Sbjct: 161 -GITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA--SKKMKDKIGT 214
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLELITG 503
+IAPE L G EK DV+ GV+L L++G
Sbjct: 215 AYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 246
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 104/237 (43%), Gaps = 21/237 (8%)
Query: 304 NFSPKNILGQGGYGVVYKG--CLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNL 361
+++ ++G G +GVVY+ C +V K L+D F E++++ H N+
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNI 87
Query: 362 LRLYGFCMTPEERL------LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARG 415
+RL F + E+ LV Y+P +V R +AK L R
Sbjct: 88 VRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 146
Query: 416 LLYLHEQCNPKIIHRDVKAANILLDESFEAV-VGDFGLAKLLDRRDSHVTTAVRGTVGHI 474
L Y+H I HRD+K N+LLD + + DFG AK L R + +V+ + +
Sbjct: 147 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYR 201
Query: 475 APEYL-STGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEER 530
APE + + DV+ G +L EL+ GQ +G Q I+ + T E+
Sbjct: 202 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 258
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 14/165 (8%)
Query: 345 QFQTEVEMIGLALHRNLLRLYGFCMTPEER--LLVYPYMPNGSVADCLRDTRQAKPPLDW 402
Q E+ ++ H N+++L P E +V+ + G V + PL
Sbjct: 82 QVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV-----PTLKPLSE 136
Query: 403 NRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSH 462
++ +G+ YLH Q KIIHRD+K +N+L+ E + DFG++ D+
Sbjct: 137 DQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDAL 193
Query: 463 VTTAVRGTVGHIAPEYLSTGQ---SSEKTDVFGFGVLLLELITGQ 504
++ V GT +APE LS + S + DV+ GV L + GQ
Sbjct: 194 LSNTV-GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 21/213 (9%)
Query: 300 IATGNFSPKNILGQGGYGVVY------KGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMI 353
I + + + +LG+G +G V G V++ +++K T + EV+++
Sbjct: 47 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQK--TDKESLLREVQLL 104
Query: 354 GLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTA 413
H N+++LY F LV G + D + +R+ +D R + L
Sbjct: 105 KQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII-SRKRFSEVDAARIIRQVLS-- 161
Query: 414 RGLLYLHEQCNPKIIHRDVKAANILLDESFEAV---VGDFGLAKLLDRRDSHVTTAVRGT 470
G+ Y+H+ KI+HRD+K N+LL+ + + DFGL+ + S GT
Sbjct: 162 -GITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA--SKKMKDKIGT 215
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLELITG 503
+IAPE L G EK DV+ GV+L L++G
Sbjct: 216 AYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 247
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 104/237 (43%), Gaps = 21/237 (8%)
Query: 304 NFSPKNILGQGGYGVVYKG--CLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNL 361
+++ ++G G +GVVY+ C +V K L+D F E++++ H N+
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNI 88
Query: 362 LRLYGFCMTPEERL------LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARG 415
+RL F + E+ LV Y+P +V R +AK L R
Sbjct: 89 VRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 147
Query: 416 LLYLHEQCNPKIIHRDVKAANILLDESFEAV-VGDFGLAKLLDRRDSHVTTAVRGTVGHI 474
L Y+H I HRD+K N+LLD + + DFG AK L R + +V+ + +
Sbjct: 148 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYYR 202
Query: 475 APEYL-STGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEER 530
APE + + DV+ G +L EL+ GQ +G Q I+ + T E+
Sbjct: 203 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 259
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 105/239 (43%), Gaps = 25/239 (10%)
Query: 304 NFSPKNILGQGGYGVVYKG--CLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNL 361
+++ ++G G +GVVY+ C +V K L+D F E++++ H N+
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNI 109
Query: 362 LRLYGFCMTPEERL------LVYPYMPNG--SVADCLRDTRQAKPPLDWNRRMHIALGTA 413
+RL F + E+ LV Y+P VA +Q P + M+
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF--- 166
Query: 414 RGLLYLHEQCNPKIIHRDVKAANILLDESFEAV-VGDFGLAKLLDRRDSHVTTAVRGTVG 472
R L Y+H I HRD+K N+LLD + + DFG AK L R + +V+ +
Sbjct: 167 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRY 221
Query: 473 HIAPEYL-STGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEER 530
+ APE + + DV+ G +L EL+ GQ +G Q I+ + T E+
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 280
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 89/195 (45%), Gaps = 10/195 (5%)
Query: 311 LGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCM 369
+GQG G VY + VA++++ + E+ ++ + N++ +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 370 TPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIH 429
+E +V Y+ GS+ D + +T +D + + + L +LH ++IH
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHSN---QVIH 140
Query: 430 RDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTD 489
R++K+ NILL + DFG + S +T V GT +APE ++ K D
Sbjct: 141 RNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKVD 199
Query: 490 VFGFGVLLLELITGQ 504
++ G++ +E+I G+
Sbjct: 200 IWSLGIMAIEMIEGE 214
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 105/239 (43%), Gaps = 25/239 (10%)
Query: 304 NFSPKNILGQGGYGVVYKG--CLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNL 361
+++ ++G G +GVVY+ C +V K L+D F E++++ H N+
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNI 111
Query: 362 LRLYGFCMTPEERL------LVYPYMPNG--SVADCLRDTRQAKPPLDWNRRMHIALGTA 413
+RL F + E+ LV Y+P VA +Q P + M+
Sbjct: 112 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF--- 168
Query: 414 RGLLYLHEQCNPKIIHRDVKAANILLDESFEAV-VGDFGLAKLLDRRDSHVTTAVRGTVG 472
R L Y+H I HRD+K N+LLD + + DFG AK L R + +V+ +
Sbjct: 169 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRY 223
Query: 473 HIAPEYL-STGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEER 530
+ APE + + DV+ G +L EL+ GQ +G Q I+ + T E+
Sbjct: 224 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 282
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 105/239 (43%), Gaps = 25/239 (10%)
Query: 304 NFSPKNILGQGGYGVVYKG--CLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNL 361
+++ ++G G +GVVY+ C +V K L+D F E++++ H N+
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNI 113
Query: 362 LRLYGFCMTPEERL------LVYPYMPNG--SVADCLRDTRQAKPPLDWNRRMHIALGTA 413
+RL F + E+ LV Y+P VA +Q P + M+
Sbjct: 114 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF--- 170
Query: 414 RGLLYLHEQCNPKIIHRDVKAANILLDESFEAV-VGDFGLAKLLDRRDSHVTTAVRGTVG 472
R L Y+H I HRD+K N+LLD + + DFG AK L R + +V+ +
Sbjct: 171 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRY 225
Query: 473 HIAPEYL-STGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEER 530
+ APE + + DV+ G +L EL+ GQ +G Q I+ + T E+
Sbjct: 226 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 284
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 88/195 (45%), Gaps = 10/195 (5%)
Query: 311 LGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCM 369
+GQG G VY + VA++++ + E+ ++ + N++ +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 370 TPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIH 429
+E +V Y+ GS+ D + +T +D + + + L +LH ++IH
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHSN---QVIH 139
Query: 430 RDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTD 489
RD+K+ NILL + DFG + S + V GT +APE ++ K D
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEVVTRKAYGPKVD 198
Query: 490 VFGFGVLLLELITGQ 504
++ G++ +E+I G+
Sbjct: 199 IWSLGIMAIEMIEGE 213
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 88/195 (45%), Gaps = 10/195 (5%)
Query: 311 LGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCM 369
+GQG G VY + VA++++ + E+ ++ + N++ +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 370 TPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIH 429
+E +V Y+ GS+ D + +T +D + + + L +LH ++IH
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHSN---QVIH 139
Query: 430 RDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTD 489
RD+K+ NILL + DFG + S + V GT +APE ++ K D
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMV-GTPYWMAPEVVTRKAYGPKVD 198
Query: 490 VFGFGVLLLELITGQ 504
++ G++ +E+I G+
Sbjct: 199 IWSLGIMAIEMIEGE 213
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 104/237 (43%), Gaps = 21/237 (8%)
Query: 304 NFSPKNILGQGGYGVVYKG--CLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNL 361
+++ ++G G +GVVY+ C +V K L+D F E++++ H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKLDHCNI 75
Query: 362 LRLYGFCMTPEERL------LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARG 415
+RL F + E+ LV Y+P +V R +AK L R
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 416 LLYLHEQCNPKIIHRDVKAANILLDESFEAV-VGDFGLAKLLDRRDSHVTTAVRGTVGHI 474
L Y+H I HRD+K N+LLD + + DFG AK L R + +V+ + +
Sbjct: 135 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYYR 189
Query: 475 APEYL-STGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEER 530
APE + + DV+ G +L EL+ GQ +G Q I+ + T E+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 246
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 102/233 (43%), Gaps = 13/233 (5%)
Query: 306 SPKNILGQGGYGVVYKGC--LPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLR 363
S ILG G +G V+K C + +A K +K + + + E+ ++ H NL++
Sbjct: 92 SKTEILGGGRFGQVHK-CEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQ 150
Query: 364 LYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQC 423
LY + + +LV Y+ G + D + D LD + G+ ++H+
Sbjct: 151 LYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELD---TILFMKQICEGIRHMHQMY 207
Query: 424 NPKIIHRDVKAANILL--DESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLST 481
I+H D+K NIL ++ + + DFGLA+ R+ GT +APE ++
Sbjct: 208 ---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF--GTPEFLAPEVVNY 262
Query: 482 GQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDV 534
S TD++ GV+ L++G N IL C L +E D+
Sbjct: 263 DFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDI 315
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 94/215 (43%), Gaps = 26/215 (12%)
Query: 311 LGQGGYGVVYKGCL------PNRMVVAVKRLK-DPNFTGEVQFQTEVEMIG-LALHRNLL 362
LG G +G V + M VAVK LK + T +E++++ L H N++
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 363 RLYGFCMTPEERLLVYPYMPNGSVADCLRDTR------QAKPPL--------DWNRRMHI 408
L G C L++ Y G + + LR R + P + D +
Sbjct: 107 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 166
Query: 409 ALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTA-V 467
+ A+G+ +L + IHRD+ A NILL + DFGLA+ + ++V
Sbjct: 167 SYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 223
Query: 468 RGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT 502
R V +APE + + ++DV+ +G+ L EL +
Sbjct: 224 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 94/215 (43%), Gaps = 26/215 (12%)
Query: 311 LGQGGYGVVYKGCL------PNRMVVAVKRLK-DPNFTGEVQFQTEVEMIG-LALHRNLL 362
LG G +G V + M VAVK LK + T +E++++ L H N++
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 363 RLYGFCMTPEERLLVYPYMPNGSVADCLRDTR------QAKPPL--------DWNRRMHI 408
L G C L++ Y G + + LR R + P + D +
Sbjct: 91 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 150
Query: 409 ALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTA-V 467
+ A+G+ +L + IHRD+ A NILL + DFGLA+ + ++V
Sbjct: 151 SYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 207
Query: 468 RGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT 502
R V +APE + + ++DV+ +G+ L EL +
Sbjct: 208 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 103/233 (44%), Gaps = 27/233 (11%)
Query: 291 KRFSFRELQIATGNFSPKNILGQGGYGVVYKGCL------PNRMVVAVKRLKDPNFTGEV 344
K+ +E+ ++ F + LG+ +G VYKG L VA+K LKD G +
Sbjct: 16 KQAKLKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKD-KAEGPL 72
Query: 345 --QFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCL------------ 390
+F+ E + H N++ L G + +++ Y +G + + L
Sbjct: 73 REEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGST 132
Query: 391 RDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDF 450
D R K L+ +H+ A G+ YL ++H+D+ N+L+ + + D
Sbjct: 133 DDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDL 189
Query: 451 GLAKLLDRRDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT 502
GL + + D + + + +APE + G+ S +D++ +GV+L E+ +
Sbjct: 190 GLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 88/195 (45%), Gaps = 10/195 (5%)
Query: 311 LGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCM 369
+GQG G VY + VA++++ + E+ ++ + N++ +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 370 TPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIH 429
+E +V Y+ GS+ D + +T +D + + + L +LH ++IH
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHSN---QVIH 140
Query: 430 RDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTD 489
RD+K+ NILL + DFG + S + V GT +APE ++ K D
Sbjct: 141 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEVVTRKAYGPKVD 199
Query: 490 VFGFGVLLLELITGQ 504
++ G++ +E+I G+
Sbjct: 200 IWSLGIMAIEMIEGE 214
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 94/215 (43%), Gaps = 26/215 (12%)
Query: 311 LGQGGYGVVYKGCL------PNRMVVAVKRLK-DPNFTGEVQFQTEVEMIG-LALHRNLL 362
LG G +G V + M VAVK LK + T +E++++ L H N++
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 363 RLYGFCMTPEERLLVYPYMPNGSVADCLRDTR------QAKPPL--------DWNRRMHI 408
L G C L++ Y G + + LR R + P + D +
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 409 ALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTA-V 467
+ A+G+ +L + IHRD+ A NILL + DFGLA+ + ++V
Sbjct: 174 SYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNA 230
Query: 468 RGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT 502
R V +APE + + ++DV+ +G+ L EL +
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFEAVVG---DFGLAKLLDRRDSHVTTAVRGTV 471
L YLHE +IIHRD+K NI+L + ++ D G AK LD+ + T GT+
Sbjct: 133 ALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQ--GELCTEFVGTL 187
Query: 472 GHIAPEYLSTGQSSEKTDVFGFGVLLLELITG 503
++APE L + + D + FG L E ITG
Sbjct: 188 QYLAPELLEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFEAVVG---DFGLAKLLDRRDSHVTTAVRGTV 471
L YLHE +IIHRD+K NI+L + ++ D G AK LD+ + T GT+
Sbjct: 134 ALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQ--GELCTEFVGTL 188
Query: 472 GHIAPEYLSTGQSSEKTDVFGFGVLLLELITG 503
++APE L + + D + FG L E ITG
Sbjct: 189 QYLAPELLEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 121/285 (42%), Gaps = 44/285 (15%)
Query: 311 LGQGGYGVVYKG------CLPNRMVVAVKRLKDPNFTGEVQ-FQTEVE-MIGLALHRNLL 362
LG+G +G V + VAVK LK+ E + +E++ +I + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 363 RLYGFCMTPEERLLVY-PYMPNGSVADCLRDTRQAKPPL---------DWNRRMHI---A 409
L G C P L+V + G+++ LR R P D+ H+ +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 410 LGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTA-VR 468
A+G+ +L + K IHRD+ A NILL E + DFGLA+ + + V R
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 469 GTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILD--CVRTL 526
+ +APE + + ++DV+ FGVLL E+ + G+ +D R L
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRL 264
Query: 527 HEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
E R+ + D T E M Q L C P+ RP S
Sbjct: 265 KEGTRMR---------APDYTTPE-MYQTMLDCWHGEPSQRPTFS 299
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 94/215 (43%), Gaps = 26/215 (12%)
Query: 311 LGQGGYGVVYKGCL------PNRMVVAVKRLK-DPNFTGEVQFQTEVEMIG-LALHRNLL 362
LG G +G V + M VAVK LK + T +E++++ L H N++
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 363 RLYGFCMTPEERLLVYPYMPNGSVADCLRDTR------QAKPPL--------DWNRRMHI 408
L G C L++ Y G + + LR R + P + D +
Sbjct: 109 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 168
Query: 409 ALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTA-V 467
+ A+G+ +L + IHRD+ A NILL + DFGLA+ + ++V
Sbjct: 169 SYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 225
Query: 468 RGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT 502
R V +APE + + ++DV+ +G+ L EL +
Sbjct: 226 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 21/213 (9%)
Query: 300 IATGNFSPKNILGQGGYGVVY------KGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMI 353
I + + + +LG+G +G V G V++ +++K T + EV+++
Sbjct: 29 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQK--TDKESLLREVQLL 86
Query: 354 GLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTA 413
H N+++LY F LV G + D + +R+ +D R + L
Sbjct: 87 KQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII-SRKRFSEVDAARIIRQVLS-- 143
Query: 414 RGLLYLHEQCNPKIIHRDVKAANILLDESFEAV---VGDFGLAKLLDRRDSHVTTAVRGT 470
G+ Y+H+ KI+HRD+K N+LL+ + + DFGL+ + S GT
Sbjct: 144 -GITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA--SKKMKDKIGT 197
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLELITG 503
+IAPE L G EK DV+ GV+L L++G
Sbjct: 198 AYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 229
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 4/107 (3%)
Query: 397 KPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL 456
K P+ + + ARG+ +L + K IHRD+ A NILL E+ + DFGLA+ +
Sbjct: 193 KEPITMEDLISYSFQVARGMEFLSSR---KCIHRDLAARNILLSENNVVKICDFGLARDI 249
Query: 457 DRRDSHVTTA-VRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT 502
+ +V R + +APE + S K+DV+ +GVLL E+ +
Sbjct: 250 YKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 94/215 (43%), Gaps = 26/215 (12%)
Query: 311 LGQGGYGVVYKGCL------PNRMVVAVKRLK-DPNFTGEVQFQTEVEMIG-LALHRNLL 362
LG G +G V + M VAVK LK + T +E++++ L H N++
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 363 RLYGFCMTPEERLLVYPYMPNGSVADCLRDTR------QAKPPL--------DWNRRMHI 408
L G C L++ Y G + + LR R + P + D +
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 409 ALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTA-V 467
+ A+G+ +L + IHRD+ A NILL + DFGLA+ + ++V
Sbjct: 174 SYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 230
Query: 468 RGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT 502
R V +APE + + ++DV+ +G+ L EL +
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 108/232 (46%), Gaps = 24/232 (10%)
Query: 304 NFSPKNILGQGGYGVVYKGCLPNRM---VVAVKRLKDPNFTGEVQFQT--EVEMIGLALH 358
NF +G+G YGVVYK N++ VVA+K+++ T V E+ ++ H
Sbjct: 4 NFQKVEKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 359 RNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
N+++L T + LV+ ++ + + D + + PL + L +GL +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYLFQL--LQGLAF 118
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLD---RRDSHVTTAVRGTVGHIA 475
H +++HRD+K N+L++ + DFGLA+ R H T+ + A
Sbjct: 119 CHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRA 171
Query: 476 PEY-LSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTL 526
PE L S D++ G + E++T ++AL G+ ++ + + RTL
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ--LFRIFRTL 220
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 93/199 (46%), Gaps = 17/199 (8%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQT--EVEMIGLALHRNLLRLYGFC 368
+G+G YGVVYK A+K+++ + T E+ ++ H N+++LY
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 369 MTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKII 428
T + +LV+ ++ D + + L+ L G+ Y H++ +++
Sbjct: 70 HTKKRLVLVFEHLDQ----DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVL 122
Query: 429 HRDVKAANILLDESFEAVVGDFGLAKLLD---RRDSHVTTAVRGTVGHIAPEYL-STGQS 484
HRD+K N+L++ E + DFGLA+ R+ +H T+ + AP+ L + +
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV----TLWYRAPDVLMGSKKY 178
Query: 485 SEKTDVFGFGVLLLELITG 503
S D++ G + E++ G
Sbjct: 179 STTIDIWSVGCIFAEMVNG 197
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 91/211 (43%), Gaps = 31/211 (14%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCM- 369
+G+G +G V++G V AVK + + E+ + H N+L GF
Sbjct: 11 IGKGRFGEVWRGKWRGEEV-AVKIFSSREERSWFR-EAEIYQTVMLRHENIL---GFIAA 65
Query: 370 ------TPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLH--- 420
T + LV Y +GS+ D L + + +AL TA GL +LH
Sbjct: 66 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEI 120
Query: 421 --EQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVG---HIA 475
Q P I HRD+K+ NIL+ ++ + D GLA D + A VG ++A
Sbjct: 121 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 180
Query: 476 PEYLSTG------QSSEKTDVFGFGVLLLEL 500
PE L +S ++ D++ G++ E+
Sbjct: 181 PEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 93/199 (46%), Gaps = 17/199 (8%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQT--EVEMIGLALHRNLLRLYGFC 368
+G+G YGVVYK A+K+++ + T E+ ++ H N+++LY
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 369 MTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKII 428
T + +LV+ ++ D + + L+ L G+ Y H++ +++
Sbjct: 70 HTKKRLVLVFEHLDQ----DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVL 122
Query: 429 HRDVKAANILLDESFEAVVGDFGLAKLLD---RRDSHVTTAVRGTVGHIAPEYL-STGQS 484
HRD+K N+L++ E + DFGLA+ R+ +H T+ + AP+ L + +
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV----TLWYRAPDVLMGSKKY 178
Query: 485 SEKTDVFGFGVLLLELITG 503
S D++ G + E++ G
Sbjct: 179 STTIDIWSVGCIFAEMVNG 197
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 91/211 (43%), Gaps = 31/211 (14%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCM- 369
+G+G +G V++G V AVK + + E+ + H N+L GF
Sbjct: 37 IGKGRFGEVWRGKWRGEEV-AVKIFSSREERSWFR-EAEIYQTVMLRHENIL---GFIAA 91
Query: 370 ------TPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLH--- 420
T + LV Y +GS+ D L + + +AL TA GL +LH
Sbjct: 92 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEI 146
Query: 421 --EQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVG---HIA 475
Q P I HRD+K+ NIL+ ++ + D GLA D + A VG ++A
Sbjct: 147 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 206
Query: 476 PEYLSTG------QSSEKTDVFGFGVLLLEL 500
PE L +S ++ D++ G++ E+
Sbjct: 207 PEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 110/260 (42%), Gaps = 57/260 (21%)
Query: 294 SFRELQIATGNFSPKNILGQGGYGVVYKGCLPN--RMVVAVK-----RLKDPNFTGEVQF 346
S ELQ + K +GQG YGVV + + N R + A+K +++ N +
Sbjct: 20 SLLELQ---KKYHLKGAIGQGSYGVV-RVAIENQTRAIRAIKIMNKNKIRQINPKDVERI 75
Query: 347 QTEVEMIGLALHRNLLRLYG-------FCMTPE--------ERLLVYPYMPNGSVADCLR 391
+TEV ++ H N+ RLY C+ E ++L V+ G A +
Sbjct: 76 KTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVV 135
Query: 392 DTRQAKPP-----------------LDWNRRMHIALGTAR----GLLYLHEQCNPKIIHR 430
T+ P LD+ +R + R L YLH Q I HR
Sbjct: 136 KTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ---GICHR 192
Query: 431 DVKAANILL--DESFEAVVGDFGLAK---LLDRRDSHVTTAVRGTVGHIAPEYLSTGQSS 485
D+K N L ++SFE + DFGL+K L+ + + T GT +APE L+T S
Sbjct: 193 DIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNES 252
Query: 486 --EKTDVFGFGVLLLELITG 503
K D + GVLL L+ G
Sbjct: 253 YGPKCDAWSAGVLLHLLLMG 272
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 91/211 (43%), Gaps = 31/211 (14%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCM- 369
+G+G +G V++G V AVK + + E+ + H N+L GF
Sbjct: 12 IGKGRFGEVWRGKWRGEEV-AVKIFSSREERSWFR-EAEIYQTVMLRHENIL---GFIAA 66
Query: 370 ------TPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLH--- 420
T + LV Y +GS+ D L + + +AL TA GL +LH
Sbjct: 67 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEI 121
Query: 421 --EQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVG---HIA 475
Q P I HRD+K+ NIL+ ++ + D GLA D + A VG ++A
Sbjct: 122 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 181
Query: 476 PEYLSTG------QSSEKTDVFGFGVLLLEL 500
PE L +S ++ D++ G++ E+
Sbjct: 182 PEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 91/211 (43%), Gaps = 31/211 (14%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCM- 369
+G+G +G V++G V AVK + + E+ + H N+L GF
Sbjct: 17 IGKGRFGEVWRGKWRGEEV-AVKIFSSREERSWFR-EAEIYQTVMLRHENIL---GFIAA 71
Query: 370 ------TPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLH--- 420
T + LV Y +GS+ D L + + +AL TA GL +LH
Sbjct: 72 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEI 126
Query: 421 --EQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVG---HIA 475
Q P I HRD+K+ NIL+ ++ + D GLA D + A VG ++A
Sbjct: 127 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 186
Query: 476 PEYLSTG------QSSEKTDVFGFGVLLLEL 500
PE L +S ++ D++ G++ E+
Sbjct: 187 PEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 91/211 (43%), Gaps = 31/211 (14%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCM- 369
+G+G +G V++G V AVK + + E+ + H N+L GF
Sbjct: 14 IGKGRFGEVWRGKWRGEEV-AVKIFSSREERSWFR-EAEIYQTVMLRHENIL---GFIAA 68
Query: 370 ------TPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLH--- 420
T + LV Y +GS+ D L + + +AL TA GL +LH
Sbjct: 69 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEI 123
Query: 421 --EQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVG---HIA 475
Q P I HRD+K+ NIL+ ++ + D GLA D + A VG ++A
Sbjct: 124 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 183
Query: 476 PEYLSTG------QSSEKTDVFGFGVLLLEL 500
PE L +S ++ D++ G++ E+
Sbjct: 184 PEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 108/232 (46%), Gaps = 24/232 (10%)
Query: 304 NFSPKNILGQGGYGVVYKGCLPNRM---VVAVKRLKDPNFTGEVQFQT--EVEMIGLALH 358
NF +G+G YGVVYK N++ VVA+K+++ T V E+ ++ H
Sbjct: 7 NFQKVEKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 359 RNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
N+++L T + LV+ ++ + + D + + PL + L +GL +
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQL--LQGLAF 121
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLD---RRDSHVTTAVRGTVGHIA 475
H +++HRD+K N+L++ + DFGLA+ R H T+ + A
Sbjct: 122 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRA 174
Query: 476 PEY-LSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTL 526
PE L S D++ G + E++T ++AL G+ ++ + + RTL
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ--LFRIFRTL 223
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 108/232 (46%), Gaps = 24/232 (10%)
Query: 304 NFSPKNILGQGGYGVVYKGCLPNRM---VVAVKRLKDPNFTGEVQFQT--EVEMIGLALH 358
NF +G+G YGVVYK N++ VVA+K+++ T V E+ ++ H
Sbjct: 6 NFQKVEKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 359 RNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
N+++L T + LV+ ++ + + D + + PL + L +GL +
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQL--LQGLAF 120
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLD---RRDSHVTTAVRGTVGHIA 475
H +++HRD+K N+L++ + DFGLA+ R H T+ + A
Sbjct: 121 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRA 173
Query: 476 PEY-LSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTL 526
PE L S D++ G + E++T ++AL G+ ++ + + RTL
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ--LFRIFRTL 222
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 93/199 (46%), Gaps = 17/199 (8%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQT--EVEMIGLALHRNLLRLYGFC 368
+G+G YGVVYK A+K+++ + T E+ ++ H N+++LY
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 369 MTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKII 428
T + +LV+ ++ D + + L+ L G+ Y H++ +++
Sbjct: 70 HTKKRLVLVFEHLDQ----DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVL 122
Query: 429 HRDVKAANILLDESFEAVVGDFGLAKLLD---RRDSHVTTAVRGTVGHIAPEYL-STGQS 484
HRD+K N+L++ E + DFGLA+ R+ +H T+ + AP+ L + +
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV----TLWYRAPDVLMGSKKY 178
Query: 485 SEKTDVFGFGVLLLELITG 503
S D++ G + E++ G
Sbjct: 179 STTIDIWSVGCIFAEMVNG 197
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
Query: 424 NPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQ 483
N +IIHRD+K NILLDE + DF +A +L R++ +TT GT ++APE S+ +
Sbjct: 133 NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLP-RETQITTMA-GTKPYMAPEMFSSRK 190
Query: 484 S---SEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMI 519
S D + GV EL+ G++ + + K ++
Sbjct: 191 GAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIV 229
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 91/211 (43%), Gaps = 31/211 (14%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCM- 369
+G+G +G V++G V AVK + + E+ + H N+L GF
Sbjct: 50 IGKGRFGEVWRGKWRGEEV-AVKIFSSREERSWFR-EAEIYQTVMLRHENIL---GFIAA 104
Query: 370 ------TPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLH--- 420
T + LV Y +GS+ D L + + +AL TA GL +LH
Sbjct: 105 DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEI 159
Query: 421 --EQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVG---HIA 475
Q P I HRD+K+ NIL+ ++ + D GLA D + A VG ++A
Sbjct: 160 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 219
Query: 476 PEYLSTG------QSSEKTDVFGFGVLLLEL 500
PE L +S ++ D++ G++ E+
Sbjct: 220 PEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 107/236 (45%), Gaps = 19/236 (8%)
Query: 304 NFSPKNILGQGGYGVVYKGCLPNR-MVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLL 362
+++ ++G G +GVVY+ L + +VA+K++ G+ E++++ H N++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNRELQIMRKLDHCNIV 76
Query: 363 RLYGFCMTPEERL------LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGL 416
RL F + E+ LV Y+P +V R +AK L R L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVP-ATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 417 LYLHEQCNPKIIHRDVKAANILLDESFEAV-VGDFGLAKLLDRRDSHVTTAVRGTVGHIA 475
Y+H I HRD+K N+LLD + + DFG AK L R + +V+ + + A
Sbjct: 136 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRA 190
Query: 476 PEYL-STGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEER 530
PE + + DV+ G +L EL+ GQ +G Q I+ + T E+
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 246
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 101/230 (43%), Gaps = 27/230 (11%)
Query: 294 SFRELQIATGNFSPKNILGQGGYGVVYKGCL------PNRMVVAVKRLKDPNFTGEV--Q 345
+E+ ++ F + LG+ +G VYKG L VA+K LKD G + +
Sbjct: 2 KLKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKD-KAEGPLREE 58
Query: 346 FQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCL------------RDT 393
F+ E + H N++ L G + +++ Y +G + + L D
Sbjct: 59 FRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDD 118
Query: 394 RQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLA 453
R K L+ +H+ A G+ YL ++H+D+ N+L+ + + D GL
Sbjct: 119 RTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLF 175
Query: 454 KLLDRRDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT 502
+ + D + + + +APE + G+ S +D++ +GV+L E+ +
Sbjct: 176 REVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 97/220 (44%), Gaps = 19/220 (8%)
Query: 299 QIATGNFSPKNILGQGGYGVVY--KGCLPNRMVVAVKRLKDP--NFTGEVQFQTEVEMIG 354
Q GN+ + +G+G + V + L R V AVK + N T + EV ++
Sbjct: 11 QPHIGNYRLQKTIGKGNFAKVKLARHVLTGREV-AVKIIDKTQLNPTSLQKLFREVRIMK 69
Query: 355 LALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTAR 414
+ H N+++L+ T + LV Y G V D L + K A R
Sbjct: 70 ILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE--------ARAKFR 121
Query: 415 GLLYLHEQCNPK-IIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGH 473
++ + C+ K I+HRD+KA N+LLD + DFG + + T G+ +
Sbjct: 122 QIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFC--GSPPY 179
Query: 474 IAPEYLSTGQSSE--KTDVFGFGVLLLELITGQKALDVGN 511
APE L G+ + + DV+ GV+L L++G D N
Sbjct: 180 AAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 218
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 21/213 (9%)
Query: 300 IATGNFSPKNILGQGGYGVVY--KGCLPNR----MVVAVKRLKDPNFTGEVQFQTEVEMI 353
I + + + +LG+G +G V K + + V++ +++K T + EV+++
Sbjct: 23 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQK--TDKESLLREVQLL 80
Query: 354 GLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTA 413
H N+ +LY F LV G + D + +R+ +D R + L
Sbjct: 81 KQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEII-SRKRFSEVDAARIIRQVLS-- 137
Query: 414 RGLLYLHEQCNPKIIHRDVKAANILLDESFEAV---VGDFGLAKLLDRRDSHVTTAVRGT 470
G+ Y H+ KI+HRD+K N+LL+ + + DFGL+ + S GT
Sbjct: 138 -GITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA--SKKXKDKIGT 191
Query: 471 VGHIAPEYLSTGQSSEKTDVFGFGVLLLELITG 503
+IAPE L G EK DV+ GV+L L++G
Sbjct: 192 AYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 223
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 17/199 (8%)
Query: 311 LGQGGYGVVYKGCLPNRMV---VAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGF 367
LG G +GVV++ + R A K + P+ + + + E++ + + H L+ L+
Sbjct: 165 LGTGAFGVVHR--VTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA 222
Query: 368 CMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKI 427
E +++Y +M G + + + D + + + +GL ++HE
Sbjct: 223 FEDDNEMVMIYEFMSGGELFEKVADEHNK---MSEDEAVEYMRQVCKGLCHMHEN---NY 276
Query: 428 IHRDVKAANILL--DESFEAVVGDFGLAKLLDRRDS-HVTTAVRGTVGHIAPEYLSTGQS 484
+H D+K NI+ S E + DFGL LD + S VTT GT APE
Sbjct: 277 VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKPV 333
Query: 485 SEKTDVFGFGVLLLELITG 503
TD++ GVL L++G
Sbjct: 334 GYYTDMWSVGVLSYILLSG 352
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 25/204 (12%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLK-DPNFTGEVQFQT-EVEMIGLALHRNLLRLYGFC 368
+G+G YGVVYK +VA+KR++ D G E+ ++ H N++ L
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 369 MTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNR------RMHIAL-GTARGLLYLHE 421
+ LV+ +M + K LD N+ ++ I L RG+ + H+
Sbjct: 89 HSERCLTLVFEFM-----------EKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQ 137
Query: 422 QCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYL-S 480
+I+HRD+K N+L++ + DFGLA+ T V T+ + AP+ L
Sbjct: 138 H---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEV-VTLWYRAPDVLMG 193
Query: 481 TGQSSEKTDVFGFGVLLLELITGQ 504
+ + S D++ G + E+ITG+
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 94/217 (43%), Gaps = 19/217 (8%)
Query: 296 RELQIATGNFSPKNI------LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQ-FQT 348
RE + + P + LG G +G VYK +A ++ + E++ +
Sbjct: 6 REYEHVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIV 65
Query: 349 EVEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSV-ADCLRDTRQAKPPLDWNRRMH 407
E+E++ H +++L G + ++ + P G+V A L R P +
Sbjct: 66 EIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEP----QIQV 121
Query: 408 IALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLA----KLLDRRDSHV 463
+ L +LH + +IIHRD+KA N+L+ + + DFG++ K L +RDS +
Sbjct: 122 VCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI 178
Query: 464 TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLEL 500
T + E + K D++ G+ L+E+
Sbjct: 179 GTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 215
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 107/229 (46%), Gaps = 18/229 (7%)
Query: 304 NFSPKNILGQGGYGVVYKGCLPNRM---VVAVKRLKDPNFTGEVQFQT--EVEMIGLALH 358
NF +G+G YGVVYK N++ VVA+K+++ T V E+ ++ H
Sbjct: 5 NFQKVEKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 359 RNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
N+++L T + LV+ ++ + + + + PL + L +GL +
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAF 119
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEY 478
H +++HRD+K N+L++ + DFGLA+ T V T+ + APE
Sbjct: 120 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEI 175
Query: 479 -LSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTL 526
L S D++ G + E++T ++AL G+ ++ + + RTL
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ--LFRIFRTL 221
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 107/229 (46%), Gaps = 18/229 (7%)
Query: 304 NFSPKNILGQGGYGVVYKGCLPNRM---VVAVKRLKDPNFTGEVQFQT--EVEMIGLALH 358
NF +G+G YGVVYK N++ VVA+K+++ T V E+ ++ H
Sbjct: 11 NFQKVEKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 359 RNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
N+++L T + LV+ ++ + + + + PL + L +GL +
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAF 125
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEY 478
H +++HRD+K N+L++ + DFGLA+ T V T+ + APE
Sbjct: 126 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEI 181
Query: 479 -LSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTL 526
L S D++ G + E++T ++AL G+ ++ + + RTL
Sbjct: 182 LLGXKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ--LFRIFRTL 227
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 107/236 (45%), Gaps = 19/236 (8%)
Query: 304 NFSPKNILGQGGYGVVYKGCLPNR-MVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLL 362
+++ ++G G +GVVY+ L + +VA+K++ G+ E++++ H N++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNRELQIMRKLDHCNIV 76
Query: 363 RLYGFCMTPEERL------LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGL 416
RL F + E+ LV Y+P +V R +AK L R L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 417 LYLHEQCNPKIIHRDVKAANILLDESFEAV-VGDFGLAKLLDRRDSHVTTAVRGTVGHIA 475
Y+H I HRD+K N+LLD + + DFG AK L R + +V+ + + A
Sbjct: 136 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYYRA 190
Query: 476 PEYL-STGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEER 530
PE + + DV+ G +L EL+ GQ +G Q I+ + T E+
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 246
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 107/229 (46%), Gaps = 18/229 (7%)
Query: 304 NFSPKNILGQGGYGVVYKGCLPNRM---VVAVKRLKDPNFTGEVQFQT--EVEMIGLALH 358
NF +G+G YGVVYK N++ VVA+K+++ T V E+ ++ H
Sbjct: 4 NFQKVEKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 359 RNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
N+++L T + LV+ ++ + + + + PL + L +GL +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAF 118
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEY 478
H +++HRD+K N+L++ + DFGLA+ T V T+ + APE
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEI 174
Query: 479 -LSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTL 526
L S D++ G + E++T ++AL G+ ++ + + RTL
Sbjct: 175 LLGXKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ--LFRIFRTL 220
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 107/229 (46%), Gaps = 18/229 (7%)
Query: 304 NFSPKNILGQGGYGVVYKGCLPNRM---VVAVKRLKDPNFTGEVQFQT--EVEMIGLALH 358
NF +G+G YGVVYK N++ VVA+K+++ T V E+ ++ H
Sbjct: 4 NFQKVEKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 359 RNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
N+++L T + LV+ ++ + + + + PL + L +GL +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAF 118
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEY 478
H +++HRD+K N+L++ + DFGLA+ T V T+ + APE
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEI 174
Query: 479 -LSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTL 526
L S D++ G + E++T ++AL G+ ++ + + RTL
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ--LFRIFRTL 220
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 88/196 (44%), Gaps = 13/196 (6%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQ-FQTEVEMIGLALHRNLLRLYGFCM 369
LG G +G VYK +A ++ + E++ + E+E++ H +++L G
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 370 TPEERLLVYPYMPNGSV-ADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKII 428
+ ++ + P G+V A L R P + + L +LH + +II
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEP----QIQVVCRQMLEALNFLHSK---RII 131
Query: 429 HRDVKAANILLDESFEAVVGDFGLA----KLLDRRDSHVTTAVRGTVGHIAPEYLSTGQS 484
HRD+KA N+L+ + + DFG++ K L +RDS + T + E +
Sbjct: 132 HRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPY 191
Query: 485 SEKTDVFGFGVLLLEL 500
K D++ G+ L+E+
Sbjct: 192 DYKADIWSLGITLIEM 207
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 25/204 (12%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLK-DPNFTGEVQFQT-EVEMIGLALHRNLLRLYGFC 368
+G+G YGVVYK +VA+KR++ D G E+ ++ H N++ L
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 369 MTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNR------RMHIAL-GTARGLLYLHE 421
+ LV+ +M + K LD N+ ++ I L RG+ + H+
Sbjct: 89 HSERCLTLVFEFM-----------EKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQ 137
Query: 422 QCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYL-S 480
+I+HRD+K N+L++ + DFGLA+ T V T+ + AP+ L
Sbjct: 138 H---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEV-VTLWYRAPDVLMG 193
Query: 481 TGQSSEKTDVFGFGVLLLELITGQ 504
+ + S D++ G + E+ITG+
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 107/229 (46%), Gaps = 18/229 (7%)
Query: 304 NFSPKNILGQGGYGVVYKGCLPNRM---VVAVKRLKDPNFTGEVQFQT--EVEMIGLALH 358
NF +G+G YGVVYK N++ VVA+K+++ T V E+ ++ H
Sbjct: 3 NFQKVEKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 359 RNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
N+++L T + LV+ ++ + + + + PL + L +GL +
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAF 117
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEY 478
H +++HRD+K N+L++ + DFGLA+ T V T+ + APE
Sbjct: 118 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEI 173
Query: 479 -LSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTL 526
L S D++ G + E++T ++AL G+ ++ + + RTL
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ--LFRIFRTL 219
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 107/229 (46%), Gaps = 18/229 (7%)
Query: 304 NFSPKNILGQGGYGVVYKGCLPNRM---VVAVKRLKDPNFTGEVQFQT--EVEMIGLALH 358
NF +G+G YGVVYK N++ VVA+K+++ T V E+ ++ H
Sbjct: 3 NFQKVEKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 359 RNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
N+++L T + LV+ ++ + + + + PL + L +GL +
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAF 117
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEY 478
H +++HRD+K N+L++ + DFGLA+ T V T+ + APE
Sbjct: 118 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEI 173
Query: 479 -LSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTL 526
L S D++ G + E++T ++AL G+ ++ + + RTL
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ--LFRIFRTL 219
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 107/229 (46%), Gaps = 18/229 (7%)
Query: 304 NFSPKNILGQGGYGVVYKGCLPNRM---VVAVKRLKDPNFTGEVQFQT--EVEMIGLALH 358
NF +G+G YGVVYK N++ VVA+K+++ T V E+ ++ H
Sbjct: 11 NFQKVEKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 359 RNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
N+++L T + LV+ ++ + + + + PL + L +GL +
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAF 125
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEY 478
H +++HRD+K N+L++ + DFGLA+ T V T+ + APE
Sbjct: 126 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEI 181
Query: 479 -LSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTL 526
L S D++ G + E++T ++AL G+ ++ + + RTL
Sbjct: 182 LLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ--LFRIFRTL 227
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 32/149 (21%)
Query: 401 DW-NRR-----------MHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVG 448
DW NRR +HI + A + +LH + ++HRD+K +NI VG
Sbjct: 150 DWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVG 206
Query: 449 DFGLAKLLDRRDSHVTTAV--------RGTVG---HIAPEYLSTGQSSEKTDVFGFGVLL 497
DFGL +D+ + T G VG +++PE + S K D+F G++L
Sbjct: 207 DFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLIL 266
Query: 498 LELITGQKALDVGNGQVQKGMILDCVRTL 526
EL+ + Q+++ I+ VR L
Sbjct: 267 FELLYS------FSTQMERVRIITDVRNL 289
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Query: 304 NFSPKNILGQGGYGVVYKGCLPNRMV---VAVKRLKDPNFT-GEVQFQTEVEMIGLALHR 359
+F P +G+GG+GVV++ N++ A+KR++ PN + EV+ + H
Sbjct: 7 DFEPIQCMGRGGFGVVFEA--KNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHP 64
Query: 360 NLLRLY-GFCMTPEER 374
++R + + TP E+
Sbjct: 65 GIVRYFNAWLETPPEK 80
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 17/199 (8%)
Query: 311 LGQGGYGVVYKGCLPNRMV---VAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGF 367
LG G +GVV++ + R A K + P+ + + + E++ + + H L+ L+
Sbjct: 59 LGTGAFGVVHR--VTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA 116
Query: 368 CMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKI 427
E +++Y +M G + + + D + + + +GL ++HE
Sbjct: 117 FEDDNEMVMIYEFMSGGELFEKVADEHNK---MSEDEAVEYMRQVCKGLCHMHEN---NY 170
Query: 428 IHRDVKAANILL--DESFEAVVGDFGLAKLLDRRDS-HVTTAVRGTVGHIAPEYLSTGQS 484
+H D+K NI+ S E + DFGL LD + S VTT GT APE
Sbjct: 171 VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKPV 227
Query: 485 SEKTDVFGFGVLLLELITG 503
TD++ GVL L++G
Sbjct: 228 GYYTDMWSVGVLSYILLSG 246
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 107/229 (46%), Gaps = 18/229 (7%)
Query: 304 NFSPKNILGQGGYGVVYKGCLPNRM---VVAVKRLKDPNFTGEVQFQT--EVEMIGLALH 358
NF +G+G YGVVYK N++ VVA+K+++ T V E+ ++ H
Sbjct: 4 NFQKVEKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 359 RNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
N+++L T + LV+ ++ + + + + PL + L +GL +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAF 118
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEY 478
H +++HRD+K N+L++ + DFGLA+ T V T+ + APE
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEI 174
Query: 479 -LSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTL 526
L S D++ G + E++T ++AL G+ ++ + + RTL
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ--LFRIFRTL 220
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 21/163 (12%)
Query: 346 FQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRR 405
F+ E+++I + L G +E ++Y YM N S+ + LD N
Sbjct: 90 FKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILK----FDEYFFVLDKNYT 145
Query: 406 MHIALGTARGLL--------YLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAK-LL 456
I + + ++ Y+H + N I HRDVK +NIL+D++ + DFG ++ ++
Sbjct: 146 CFIPIQVIKCIIKSVLNSFSYIHNEKN--ICHRDVKPSNILMDKNGRVKLSDFGESEYMV 203
Query: 457 DRRDSHVTTAVRGTVGHIAPEYLSTGQSSE--KTDVFGFGVLL 497
D++ RGT + PE+ S S K D++ G+ L
Sbjct: 204 DKK----IKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 107/236 (45%), Gaps = 19/236 (8%)
Query: 304 NFSPKNILGQGGYGVVYKGCLPNR-MVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLL 362
+++ ++G G +GVVY+ L + +VA+K++ G+ E++++ H N++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNRELQIMRKLDHCNIV 76
Query: 363 RLYGFCMTPEERL------LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGL 416
RL F + E+ LV Y+P +V R +AK L R L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 417 LYLHEQCNPKIIHRDVKAANILLDESFEAV-VGDFGLAKLLDRRDSHVTTAVRGTVGHIA 475
Y+H I HRD+K N+LLD + + DFG AK L R + +V+ + + A
Sbjct: 136 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYYRA 190
Query: 476 PEYL-STGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEER 530
PE + + DV+ G +L EL+ GQ +G Q I+ + T E+
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 246
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 107/229 (46%), Gaps = 18/229 (7%)
Query: 304 NFSPKNILGQGGYGVVYKGCLPNRM---VVAVKRLKDPNFTGEVQFQT--EVEMIGLALH 358
NF +G+G YGVVYK N++ VVA+K+++ T V E+ ++ H
Sbjct: 8 NFQKVEKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 65
Query: 359 RNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
N+++L T + LV+ ++ + + + + PL + L +GL +
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAF 122
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEY 478
H +++HRD+K N+L++ + DFGLA+ T V T+ + APE
Sbjct: 123 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEI 178
Query: 479 -LSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTL 526
L S D++ G + E++T ++AL G+ ++ + + RTL
Sbjct: 179 LLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ--LFRIFRTL 224
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 107/229 (46%), Gaps = 18/229 (7%)
Query: 304 NFSPKNILGQGGYGVVYKGCLPNRM---VVAVKRLKDPNFTGEVQFQT--EVEMIGLALH 358
NF +G+G YGVVYK N++ VVA+K+++ T V E+ ++ H
Sbjct: 4 NFQKVEKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 359 RNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
N+++L T + LV+ ++ + + + + PL + L +GL +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLSF 118
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEY 478
H +++HRD+K N+L++ + DFGLA+ T V T+ + APE
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEI 174
Query: 479 -LSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTL 526
L S D++ G + E++T ++AL G+ ++ + + RTL
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ--LFRIFRTL 220
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 93/200 (46%), Gaps = 16/200 (8%)
Query: 309 NILGQGGYGVVY--KGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYG 366
+LG G + V+ K L ++ K P F + + E+ ++ H N++ L
Sbjct: 15 EVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFR-DSSLENEIAVLKKIKHENIVTLED 73
Query: 367 FCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPK 426
+ LV + G + D + + R D + + L + YLHE
Sbjct: 74 IYESTTHYYLVMQLVSGGELFDRILE-RGVYTEKDASLVIQQVLSAVK---YLHEN---G 126
Query: 427 IIHRDVKAANILL---DESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQ 483
I+HRD+K N+L +E+ + ++ DFGL+K+ ++ ++TA GT G++APE L+
Sbjct: 127 IVHRDLKPENLLYLTPEENSKIMITDFGLSKM--EQNGIMSTAC-GTPGYVAPEVLAQKP 183
Query: 484 SSEKTDVFGFGVLLLELITG 503
S+ D + GV+ L+ G
Sbjct: 184 YSKAVDCWSIGVITYILLCG 203
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 95/204 (46%), Gaps = 14/204 (6%)
Query: 305 FSPKNILGQGGYG-VVYKGCLPNRMVVAVKRLKDPNFTG-EVQFQTEVEMIGLALHRNLL 362
+ +++LG G + V+ + +VA+K + G E + E+ ++ H N++
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 363 RLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQ 422
L + L+ + G + D + + + D +R + L + YLH
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVE-KGFYTERDASRLIFQVLDAVK---YLH-- 133
Query: 423 CNPKIIHRDVKAANIL---LDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYL 479
+ I+HRD+K N+L LDE + ++ DFGL+K+ D V + GT G++APE L
Sbjct: 134 -DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP--GSVLSTACGTPGYVAPEVL 190
Query: 480 STGQSSEKTDVFGFGVLLLELITG 503
+ S+ D + GV+ L+ G
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 107/232 (46%), Gaps = 24/232 (10%)
Query: 304 NFSPKNILGQGGYGVVYKGCLPNRM---VVAVKRLKDPNFTGEVQFQT--EVEMIGLALH 358
NF +G+G YGVVYK N++ VVA+K+++ T V E+ ++ H
Sbjct: 4 NFQKVEKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 359 RNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
N+++L T + LV+ ++ + + + + PL + L +GL +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAF 118
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLD---RRDSHVTTAVRGTVGHIA 475
H +++HRD+K N+L++ + DFGLA+ R H T+ + A
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRA 171
Query: 476 PEY-LSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTL 526
PE L S D++ G + E++T ++AL G+ ++ + + RTL
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ--LFRIFRTL 220
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 107/232 (46%), Gaps = 24/232 (10%)
Query: 304 NFSPKNILGQGGYGVVYKGCLPNRM---VVAVKRLKDPNFTGEVQFQT--EVEMIGLALH 358
NF +G+G YGVVYK N++ VVA+K+++ T V E+ ++ H
Sbjct: 4 NFQKVEKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 359 RNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
N+++L T + LV+ ++ + + + + PL + L +GL +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAF 118
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLD---RRDSHVTTAVRGTVGHIA 475
H +++HRD+K N+L++ + DFGLA+ R H T+ + A
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRA 171
Query: 476 PEY-LSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTL 526
PE L S D++ G + E++T ++AL G+ ++ + + RTL
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ--LFRIFRTL 220
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 107/232 (46%), Gaps = 24/232 (10%)
Query: 304 NFSPKNILGQGGYGVVYKGCLPNRM---VVAVKRLKDPNFTGEVQFQT--EVEMIGLALH 358
NF +G+G YGVVYK N++ VVA+K+++ T V E+ ++ H
Sbjct: 5 NFQKVEKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 359 RNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
N+++L T + LV+ ++ + + + + PL + L +GL +
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAF 119
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLD---RRDSHVTTAVRGTVGHIA 475
H +++HRD+K N+L++ + DFGLA+ R H T+ + A
Sbjct: 120 CHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRA 172
Query: 476 PEY-LSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTL 526
PE L S D++ G + E++T ++AL G+ ++ + + RTL
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ--LFRIFRTL 221
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 95/204 (46%), Gaps = 14/204 (6%)
Query: 305 FSPKNILGQGGYG-VVYKGCLPNRMVVAVKRLKDPNFTG-EVQFQTEVEMIGLALHRNLL 362
+ +++LG G + V+ + +VA+K + G E + E+ ++ H N++
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 363 RLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQ 422
L + L+ + G + D + + + D +R + L + YLH
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVE-KGFYTERDASRLIFQVLDAVK---YLH-- 133
Query: 423 CNPKIIHRDVKAANIL---LDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYL 479
+ I+HRD+K N+L LDE + ++ DFGL+K+ D V + GT G++APE L
Sbjct: 134 -DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP--GSVLSTACGTPGYVAPEVL 190
Query: 480 STGQSSEKTDVFGFGVLLLELITG 503
+ S+ D + GV+ L+ G
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 107/232 (46%), Gaps = 24/232 (10%)
Query: 304 NFSPKNILGQGGYGVVYKGCLPNRM---VVAVKRLKDPNFTGEVQFQT--EVEMIGLALH 358
NF +G+G YGVVYK N++ VVA+K+++ T V E+ ++ H
Sbjct: 3 NFQKVEKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 359 RNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
N+++L T + LV+ ++ + + + + PL + L +GL +
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAF 117
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLD---RRDSHVTTAVRGTVGHIA 475
H +++HRD+K N+L++ + DFGLA+ R H T+ + A
Sbjct: 118 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRA 170
Query: 476 PEY-LSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTL 526
PE L S D++ G + E++T ++AL G+ ++ + + RTL
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ--LFRIFRTL 219
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 97/224 (43%), Gaps = 22/224 (9%)
Query: 299 QIATGNFSPKNILGQGGYGVVY-----KGCLPNRMVVAVKRLKDPNFTGEVQF----QTE 349
++ NF +LG G YG V+ G ++ A+K LK + + +TE
Sbjct: 50 KVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLY-AMKVLKKATIVQKAKTTEHTRTE 108
Query: 350 VEMIGLALHRNLLRLYGFCMTPEERL-LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHI 408
+++ L + E +L L+ Y+ G + L + + I
Sbjct: 109 RQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFT-----EHEVQI 163
Query: 409 ALG-TARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAV 467
+G L +LH+ II+RD+K NILLD + V+ DFGL+K ++
Sbjct: 164 YVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDF 220
Query: 468 RGTVGHIAPEYLSTGQS--SEKTDVFGFGVLLLELITGQKALDV 509
GT+ ++AP+ + G S + D + GVL+ EL+TG V
Sbjct: 221 CGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTV 264
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 107/232 (46%), Gaps = 24/232 (10%)
Query: 304 NFSPKNILGQGGYGVVYKGCLPNRM---VVAVKRLKDPNFTGEVQFQT--EVEMIGLALH 358
NF +G+G YGVVYK N++ VVA+K+++ T V E+ ++ H
Sbjct: 7 NFQKVEKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 359 RNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
N+++L T + LV+ ++ + + + + PL + L +GL +
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAF 121
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLD---RRDSHVTTAVRGTVGHIA 475
H +++HRD+K N+L++ + DFGLA+ R H T+ + A
Sbjct: 122 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRA 174
Query: 476 PEY-LSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTL 526
PE L S D++ G + E++T ++AL G+ ++ + + RTL
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ--LFRIFRTL 223
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 95/204 (46%), Gaps = 14/204 (6%)
Query: 305 FSPKNILGQGGYG-VVYKGCLPNRMVVAVKRLKDPNFTG-EVQFQTEVEMIGLALHRNLL 362
+ +++LG G + V+ + +VA+K + G E + E+ ++ H N++
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 363 RLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQ 422
L + L+ + G + D + + + D +R + L + YLH
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVE-KGFYTERDASRLIFQVLDAVK---YLH-- 133
Query: 423 CNPKIIHRDVKAANIL---LDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYL 479
+ I+HRD+K N+L LDE + ++ DFGL+K+ D V + GT G++APE L
Sbjct: 134 -DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP--GSVLSTACGTPGYVAPEVL 190
Query: 480 STGQSSEKTDVFGFGVLLLELITG 503
+ S+ D + GV+ L+ G
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 107/232 (46%), Gaps = 24/232 (10%)
Query: 304 NFSPKNILGQGGYGVVYKGCLPNRM---VVAVKRLKDPNFTGEVQFQT--EVEMIGLALH 358
NF +G+G YGVVYK N++ VVA+K+++ T V E+ ++ H
Sbjct: 4 NFQKVEKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 359 RNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
N+++L T + LV+ ++ + + + + PL + L +GL +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAF 118
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLD---RRDSHVTTAVRGTVGHIA 475
H +++HRD+K N+L++ + DFGLA+ R H T+ + A
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRA 171
Query: 476 PEY-LSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTL 526
PE L S D++ G + E++T ++AL G+ ++ + + RTL
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ--LFRIFRTL 220
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 107/232 (46%), Gaps = 24/232 (10%)
Query: 304 NFSPKNILGQGGYGVVYKGCLPNRM---VVAVKRLKDPNFTGEVQFQT--EVEMIGLALH 358
NF +G+G YGVVYK N++ VVA+K+++ T V E+ ++ H
Sbjct: 8 NFQKVEKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 65
Query: 359 RNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
N+++L T + LV+ ++ + + + + PL + L +GL +
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAF 122
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLD---RRDSHVTTAVRGTVGHIA 475
H +++HRD+K N+L++ + DFGLA+ R H T+ + A
Sbjct: 123 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRA 175
Query: 476 PEY-LSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTL 526
PE L S D++ G + E++T ++AL G+ ++ + + RTL
Sbjct: 176 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ--LFRIFRTL 224
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 107/232 (46%), Gaps = 24/232 (10%)
Query: 304 NFSPKNILGQGGYGVVYKGCLPNRM---VVAVKRLKDPNFTGEVQFQT--EVEMIGLALH 358
NF +G+G YGVVYK N++ VVA+K+++ T V E+ ++ H
Sbjct: 7 NFQKVEKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 359 RNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
N+++L T + LV+ ++ + + + + PL + L +GL +
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAF 121
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLD---RRDSHVTTAVRGTVGHIA 475
H +++HRD+K N+L++ + DFGLA+ R H T+ + A
Sbjct: 122 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRA 174
Query: 476 PEY-LSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTL 526
PE L S D++ G + E++T ++AL G+ ++ + + RTL
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ--LFRIFRTL 223
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 107/232 (46%), Gaps = 24/232 (10%)
Query: 304 NFSPKNILGQGGYGVVYKGCLPNRM---VVAVKRLKDPNFTGEVQFQT--EVEMIGLALH 358
NF +G+G YGVVYK N++ VVA+K+++ T V E+ ++ H
Sbjct: 6 NFQKVEKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 359 RNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
N+++L T + LV+ ++ + + + + PL + L +GL +
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAF 120
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLD---RRDSHVTTAVRGTVGHIA 475
H +++HRD+K N+L++ + DFGLA+ R H T+ + A
Sbjct: 121 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRA 173
Query: 476 PEY-LSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTL 526
PE L S D++ G + E++T ++AL G+ ++ + + RTL
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ--LFRIFRTL 222
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 94/201 (46%), Gaps = 14/201 (6%)
Query: 308 KNILGQGGYG-VVYKGCLPNRMVVAVKRLKDPNFTG-EVQFQTEVEMIGLALHRNLLRLY 365
+++LG G + V+ + +VA+K + G E + E+ ++ H N++ L
Sbjct: 23 RDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALD 82
Query: 366 GFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNP 425
+ L+ + G + D + + + D +R + L + YLH+
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIVE-KGFYTERDASRLIFQVLDAVK---YLHDLG-- 136
Query: 426 KIIHRDVKAANIL---LDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTG 482
I+HRD+K N+L LDE + ++ DFGL+K+ D V + GT G++APE L+
Sbjct: 137 -IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP--GSVLSTACGTPGYVAPEVLAQK 193
Query: 483 QSSEKTDVFGFGVLLLELITG 503
S+ D + GV+ L+ G
Sbjct: 194 PYSKAVDCWSIGVIAYILLCG 214
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 107/232 (46%), Gaps = 24/232 (10%)
Query: 304 NFSPKNILGQGGYGVVYKGCLPNRM---VVAVKRLKDPNFTGEVQFQT--EVEMIGLALH 358
NF +G+G YGVVYK N++ VVA+K+++ T V E+ ++ H
Sbjct: 6 NFQKVEKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 359 RNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
N+++L T + LV+ ++ + + + + PL + L +GL +
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAF 120
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLD---RRDSHVTTAVRGTVGHIA 475
H +++HRD+K N+L++ + DFGLA+ R H T+ + A
Sbjct: 121 CHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRA 173
Query: 476 PEY-LSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTL 526
PE L S D++ G + E++T ++AL G+ ++ + + RTL
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ--LFRIFRTL 222
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 107/232 (46%), Gaps = 24/232 (10%)
Query: 304 NFSPKNILGQGGYGVVYKGCLPNRM---VVAVKRLKDPNFTGEVQFQT--EVEMIGLALH 358
NF +G+G YGVVYK N++ VVA+K+++ T V E+ ++ H
Sbjct: 5 NFQKVEKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 359 RNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
N+++L T + LV+ ++ + + + + PL + L +GL +
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAF 119
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLD---RRDSHVTTAVRGTVGHIA 475
H +++HRD+K N+L++ + DFGLA+ R H T+ + A
Sbjct: 120 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRA 172
Query: 476 PEY-LSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTL 526
PE L S D++ G + E++T ++AL G+ ++ + + RTL
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ--LFRIFRTL 221
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 107/232 (46%), Gaps = 24/232 (10%)
Query: 304 NFSPKNILGQGGYGVVYKGCLPNRM---VVAVKRLKDPNFTGEVQFQT--EVEMIGLALH 358
NF +G+G YGVVYK N++ VVA+K+++ T V E+ ++ H
Sbjct: 3 NFQKVEKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 359 RNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
N+++L T + LV+ ++ + + + + PL + L +GL +
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAF 117
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLD---RRDSHVTTAVRGTVGHIA 475
H +++HRD+K N+L++ + DFGLA+ R H T+ + A
Sbjct: 118 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRA 170
Query: 476 PEY-LSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTL 526
PE L S D++ G + E++T ++AL G+ ++ + + RTL
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ--LFRIFRTL 219
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 107/232 (46%), Gaps = 24/232 (10%)
Query: 304 NFSPKNILGQGGYGVVYKGCLPNRM---VVAVKRLKDPNFTGEVQFQT--EVEMIGLALH 358
NF +G+G YGVVYK N++ VVA+K+++ T V E+ ++ H
Sbjct: 4 NFQKVEKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 359 RNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
N+++L T + LV+ ++ + + + + PL + L +GL +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAF 118
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLD---RRDSHVTTAVRGTVGHIA 475
H +++HRD+K N+L++ + DFGLA+ R H T+ + A
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRA 171
Query: 476 PEY-LSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTL 526
PE L S D++ G + E++T ++AL G+ ++ + + RTL
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ--LFRIFRTL 220
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 107/232 (46%), Gaps = 24/232 (10%)
Query: 304 NFSPKNILGQGGYGVVYKGCLPNRM---VVAVKRLKDPNFTGEVQFQT--EVEMIGLALH 358
NF +G+G YGVVYK N++ VVA+K+++ T V E+ ++ H
Sbjct: 6 NFQKVEKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 359 RNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
N+++L T + LV+ ++ + + + + PL + L +GL +
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAF 120
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLD---RRDSHVTTAVRGTVGHIA 475
H +++HRD+K N+L++ + DFGLA+ R H T+ + A
Sbjct: 121 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRA 173
Query: 476 PEY-LSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTL 526
PE L S D++ G + E++T ++AL G+ ++ + + RTL
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ--LFRIFRTL 222
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 107/232 (46%), Gaps = 24/232 (10%)
Query: 304 NFSPKNILGQGGYGVVYKGCLPNRM---VVAVKRLKDPNFTGEVQFQT--EVEMIGLALH 358
NF +G+G YGVVYK N++ VVA+K+++ T V E+ ++ H
Sbjct: 5 NFQKVEKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 359 RNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
N+++L T + LV+ ++ + + + + PL + L +GL +
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAF 119
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLD---RRDSHVTTAVRGTVGHIA 475
H +++HRD+K N+L++ + DFGLA+ R H T+ + A
Sbjct: 120 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRA 172
Query: 476 PEY-LSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTL 526
PE L S D++ G + E++T ++AL G+ ++ + + RTL
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ--LFRIFRTL 221
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 90/211 (42%), Gaps = 21/211 (9%)
Query: 302 TGNFSPKNILGQGGYGVVYK------GCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGL 355
+ N+ K LG+G + VV + G ++ K+L +F + + E +
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ---KLEREARICRK 84
Query: 356 ALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARG 415
H N++RL+ LV+ + G + + + R+ D + H
Sbjct: 85 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV-AREFYSEADAS---HCIQQILES 140
Query: 416 LLYLHEQCNPKIIHRDVKAANILLDESFEAV---VGDFGLAKLLDRRDSHVTTAVRGTVG 472
+ Y H I+HR++K N+LL + + DFGLA ++ DS GT G
Sbjct: 141 IAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPG 195
Query: 473 HIAPEYLSTGQSSEKTDVFGFGVLLLELITG 503
+++PE L S+ D++ GV+L L+ G
Sbjct: 196 YLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 107/232 (46%), Gaps = 24/232 (10%)
Query: 304 NFSPKNILGQGGYGVVYKGCLPNRM---VVAVKRLKDPNFTGEVQFQT--EVEMIGLALH 358
NF +G+G YGVVYK N++ VVA+K+++ T V E+ ++ H
Sbjct: 7 NFQKVEKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 359 RNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
N+++L T + LV+ ++ + + + + PL + L +GL +
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLFQL--LQGLAF 121
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLD---RRDSHVTTAVRGTVGHIA 475
H +++HRD+K N+L++ + DFGLA+ R H T+ + A
Sbjct: 122 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRA 174
Query: 476 PEY-LSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTL 526
PE L S D++ G + E++T ++AL G+ ++ + + RTL
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ--LFRIFRTL 223
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 57/129 (44%), Gaps = 4/129 (3%)
Query: 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAA 435
LV M G + + + + P R + GL +LH++ II+RD+K
Sbjct: 262 LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPE 318
Query: 436 NILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGV 495
N+LLD+ + D GLA L + T GT G +APE L + D F GV
Sbjct: 319 NVLLDDDGNVRISDLGLAVEL-KAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGV 377
Query: 496 LLLELITGQ 504
L E+I +
Sbjct: 378 TLYEMIAAR 386
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 95/219 (43%), Gaps = 17/219 (7%)
Query: 299 QIATGNFSPKNILGQGGYGVVY--KGCLPNRMVVAVKRLKDP--NFTGEVQFQTEVEMIG 354
Q GN+ +G+G + V + L R V A+K + N T + EV ++
Sbjct: 11 QPHIGNYRLLKTIGKGNFAKVKLARHILTGREV-AIKIIDKTQLNPTSLQKLFREVRIMK 69
Query: 355 LALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTAR 414
+ H N+++L+ T + L+ Y G V D L + K ++ I
Sbjct: 70 ILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIV----S 125
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHI 474
+ Y H++ +I+HRD+KA N+LLD + DFG + A G +
Sbjct: 126 AVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK--LDAFCGAPPYA 180
Query: 475 APEYLSTGQSSE--KTDVFGFGVLLLELITGQKALDVGN 511
APE L G+ + + DV+ GV+L L++G D N
Sbjct: 181 APE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 218
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 57/129 (44%), Gaps = 4/129 (3%)
Query: 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAA 435
LV M G + + + + P R + GL +LH++ II+RD+K
Sbjct: 262 LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPE 318
Query: 436 NILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGV 495
N+LLD+ + D GLA L + T GT G +APE L + D F GV
Sbjct: 319 NVLLDDDGNVRISDLGLAVEL-KAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGV 377
Query: 496 LLLELITGQ 504
L E+I +
Sbjct: 378 TLYEMIAAR 386
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 107/232 (46%), Gaps = 24/232 (10%)
Query: 304 NFSPKNILGQGGYGVVYKGCLPNRM---VVAVKRLKDPNFTGEVQFQT--EVEMIGLALH 358
NF +G+G YGVVYK N++ VVA+K+++ T V E+ ++ H
Sbjct: 5 NFQKVEKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 359 RNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
N+++L T + LV+ ++ + + + + PL + L +GL +
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAF 119
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLD---RRDSHVTTAVRGTVGHIA 475
H +++HRD+K N+L++ + DFGLA+ R H T+ + A
Sbjct: 120 CHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRA 172
Query: 476 PEY-LSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTL 526
PE L S D++ G + E++T ++AL G+ ++ + + RTL
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ--LFRIFRTL 221
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 96/219 (43%), Gaps = 17/219 (7%)
Query: 299 QIATGNFSPKNILGQGGYGVVY--KGCLPNRMVVAVKRLKDP--NFTGEVQFQTEVEMIG 354
Q GN+ +G+G + V + L R V A+K + N T + EV ++
Sbjct: 8 QPHIGNYRLLKTIGKGNFAKVKLARHILTGREV-AIKIIDKTQLNPTSLQKLFREVRIMK 66
Query: 355 LALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTAR 414
+ H N+++L+ T + L+ Y G V D L + K ++ I
Sbjct: 67 ILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIV----S 122
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHI 474
+ Y H++ +I+HRD+KA N+LLD + DFG + T G+ +
Sbjct: 123 AVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFC--GSPPYA 177
Query: 475 APEYLSTGQSSE--KTDVFGFGVLLLELITGQKALDVGN 511
APE L G+ + + DV+ GV+L L++G D N
Sbjct: 178 APE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 215
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 57/129 (44%), Gaps = 4/129 (3%)
Query: 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAA 435
LV M G + + + + P R + GL +LH++ II+RD+K
Sbjct: 262 LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPE 318
Query: 436 NILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGV 495
N+LLD+ + D GLA L + T GT G +APE L + D F GV
Sbjct: 319 NVLLDDDGNVRISDLGLAVEL-KAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGV 377
Query: 496 LLLELITGQ 504
L E+I +
Sbjct: 378 TLYEMIAAR 386
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 57/129 (44%), Gaps = 4/129 (3%)
Query: 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAA 435
LV M G + + + + P R + GL +LH++ II+RD+K
Sbjct: 262 LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPE 318
Query: 436 NILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGV 495
N+LLD+ + D GLA L + T GT G +APE L + D F GV
Sbjct: 319 NVLLDDDGNVRISDLGLAVEL-KAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGV 377
Query: 496 LLLELITGQ 504
L E+I +
Sbjct: 378 TLYEMIAAR 386
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 113/236 (47%), Gaps = 26/236 (11%)
Query: 305 FSPKNILGQGGYGVVYKGCLPNR-MVVAVKR-LKDPNFTG-EVQFQTEVEMIGLALHRNL 361
F + + GQG +G V G + M VA+K+ ++DP F E+Q ++ ++ H N+
Sbjct: 25 FQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLH---HPNI 81
Query: 362 LRLYGFCMTPEERL-------LVYPYMPNGSVADCLRD--TRQAKPPLDWNRRMHIALGT 412
++L + T ER +V Y+P+ ++ C R+ RQ PP + L
Sbjct: 82 VQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIR 140
Query: 413 ARGLLYLHEQCNPKIIHRDVKAANILLDESFEAV-VGDFGLAKLLDRRDSHVTTAVRGTV 471
+ G L+L + + HRD+K N+L++E+ + + DFG AK L + +V A +
Sbjct: 141 SIGCLHLP---SVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNV--AYICSR 195
Query: 472 GHIAPEYLSTGQS-SEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTL 526
+ APE + Q + D++ G + E++ G+ + G G + + VR L
Sbjct: 196 YYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEP---IFRGDNSAGQLHEIVRVL 248
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 107/232 (46%), Gaps = 24/232 (10%)
Query: 304 NFSPKNILGQGGYGVVYKGCLPNRM---VVAVKRLKDPNFTGEVQFQT--EVEMIGLALH 358
NF +G+G YGVVYK N++ VVA+K+++ T V E+ ++ H
Sbjct: 7 NFQKVEKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 359 RNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
N+++L T + LV+ ++ + + + + PL + L +GL +
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAF 121
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLD---RRDSHVTTAVRGTVGHIA 475
H +++HRD+K N+L++ + DFGLA+ R H T+ + A
Sbjct: 122 CHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRA 174
Query: 476 PEY-LSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTL 526
PE L S D++ G + E++T ++AL G+ ++ + + RTL
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ--LFRIFRTL 223
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 90/211 (42%), Gaps = 21/211 (9%)
Query: 302 TGNFSPKNILGQGGYGVVYK------GCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGL 355
+ N+ K LG+G + VV + G ++ K+L +F + + E +
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ---KLEREARICRK 61
Query: 356 ALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARG 415
H N++RL+ LV+ + G + + + R+ D + H
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV-AREFYSEADAS---HCIQQILES 117
Query: 416 LLYLHEQCNPKIIHRDVKAANILLDESFEAV---VGDFGLAKLLDRRDSHVTTAVRGTVG 472
+ Y H I+HR++K N+LL + + DFGLA ++ DS GT G
Sbjct: 118 IAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPG 172
Query: 473 HIAPEYLSTGQSSEKTDVFGFGVLLLELITG 503
+++PE L S+ D++ GV+L L+ G
Sbjct: 173 YLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 95/221 (42%), Gaps = 16/221 (7%)
Query: 311 LGQGGYGVVYKGCLP-NRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCM 369
L + G ++KG N +VV V +++D + F E + + H N+L + G C
Sbjct: 18 LNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQ 77
Query: 370 TP--EERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKI 427
+P L+ + P GS+ + L + +D ++ + AL ARG +LH P I
Sbjct: 78 SPPAPHPTLITHWXPYGSLYNVLHEGTNFV--VDQSQAVKFALDXARGXAFLH-TLEPLI 134
Query: 428 IHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQ---S 484
+ + ++ +DE A + D + S + +APE L +
Sbjct: 135 PRHALNSRSVXIDEDXTARIS------XADVKFSFQSPGRXYAPAWVAPEALQKKPEDTN 188
Query: 485 SEKTDVFGFGVLLLELITGQKAL-DVGNGQVQKGMILDCVR 524
D + F VLL EL+T + D+ N ++ + L+ +R
Sbjct: 189 RRSADXWSFAVLLWELVTREVPFADLSNXEIGXKVALEGLR 229
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 21/211 (9%)
Query: 302 TGNFSPKNILGQGGYGVVYK------GCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGL 355
+ N+ K LG+G + VV + G ++ K+L +F + + E +
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ---KLEREARICRK 61
Query: 356 ALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARG 415
H N++RL+ LV+ + G + + + R+ D H
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV-AREFYSEAD---ASHCIQQILES 117
Query: 416 LLYLHEQCNPKIIHRDVKAANILLDESFEAV---VGDFGLAKLLDRRDSHVTTAVRGTVG 472
+ Y H I+HR++K N+LL + + DFGLA ++ DS GT G
Sbjct: 118 IAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPG 172
Query: 473 HIAPEYLSTGQSSEKTDVFGFGVLLLELITG 503
+++PE L S+ D++ GV+L L+ G
Sbjct: 173 YLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 107/229 (46%), Gaps = 18/229 (7%)
Query: 304 NFSPKNILGQGGYGVVYKGCLPNRM---VVAVKRLKDPNFTGEVQFQT--EVEMIGLALH 358
NF +G+G YGVVYK N++ VVA+K+++ T V E+ ++ H
Sbjct: 3 NFQKVEKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 359 RNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
N+++L T + LV+ ++ + + + + PL + L +GL +
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLFQL--LQGLAF 117
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEY 478
H +++HRD+K N+L++ + DFGLA+ T V T+ + APE
Sbjct: 118 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEI 173
Query: 479 -LSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTL 526
L S D++ G + E++T ++AL G+ ++ + + RTL
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ--LFRIFRTL 219
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 94/218 (43%), Gaps = 29/218 (13%)
Query: 304 NFSPKNILGQGGYGVVYKGCLPNR---------MVVAVKRLKDPNFTGEVQFQTEVE--- 351
+ PK+++G+G VV + C+ M V +RL P EV+ T E
Sbjct: 95 KYDPKDVIGRGVSSVVRR-CVHRATGHEFAVKIMEVTAERLS-PEQLEEVREATRRETHI 152
Query: 352 MIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALG 411
+ +A H +++ L + LV+ M G + D L + K L I
Sbjct: 153 LRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTE----KVALSEKETRSIMRS 208
Query: 412 TARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTV 471
+ +LH I+HRD+K NILLD++ + + DFG + L+ + GT
Sbjct: 209 LLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLE--PGEKLRELCGTP 263
Query: 472 GHIAPEYLSTGQSS------EKTDVFGFGVLLLELITG 503
G++APE L ++ D++ GV+L L+ G
Sbjct: 264 GYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 90/211 (42%), Gaps = 21/211 (9%)
Query: 302 TGNFSPKNILGQGGYGVVYK------GCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGL 355
+ N+ K LG+G + VV + G ++ K+L +F + + E +
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ---KLEREARICRK 60
Query: 356 ALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARG 415
H N++RL+ LV+ + G + + + R+ D + H
Sbjct: 61 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV-AREFYSEADAS---HCIQQILES 116
Query: 416 LLYLHEQCNPKIIHRDVKAANILLDESFEAV---VGDFGLAKLLDRRDSHVTTAVRGTVG 472
+ Y H I+HR++K N+LL + + DFGLA ++ DS GT G
Sbjct: 117 IAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPG 171
Query: 473 HIAPEYLSTGQSSEKTDVFGFGVLLLELITG 503
+++PE L S+ D++ GV+L L+ G
Sbjct: 172 YLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 88/199 (44%), Gaps = 16/199 (8%)
Query: 311 LGQGGYGVVY---KGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGF 367
LG G YG V + + R + + + EV ++ L H N+++LY F
Sbjct: 45 LGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDF 104
Query: 368 CMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKI 427
LV G + D + R +D + L G+ YLH+ I
Sbjct: 105 FEDKRNYYLVMECYKGGELFDEII-HRMKFNEVDAAVIIKQVLS---GVTYLHKH---NI 157
Query: 428 IHRDVKAANILLD-ESFEAVVG--DFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQS 484
+HRD+K N+LL+ + +A++ DFGL+ + + + GT +IAPE L +
Sbjct: 158 VHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK--MKERLGTAYYIAPEVLRK-KY 214
Query: 485 SEKTDVFGFGVLLLELITG 503
EK DV+ GV+L L+ G
Sbjct: 215 DEKCDVWSIGVILFILLAG 233
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Query: 87 VVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQT-LDLSNNQL 145
+V+L+ + LSGTL PSI +L +L + N++SG IP +G S+L T + +S N+L
Sbjct: 127 LVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRL 186
Query: 146 VGEIPSSLGFLTHLTYLRLNNNKLSGQIPTL 176
G+IP + L +L ++ L+ N L G L
Sbjct: 187 TGKIPPTFANL-NLAFVDLSRNMLEGDASVL 216
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%)
Query: 97 LSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFL 156
L G + P+I LT L + + + +SG IP + L TLD S N L G +P S+ L
Sbjct: 89 LVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSL 148
Query: 157 THLTYLRLNNNKLSGQIP 174
+L + + N++SG IP
Sbjct: 149 PNLVGITFDGNRISGAIP 166
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 16/138 (11%)
Query: 54 IKMRDDL---HVMDGWDINSVDPC--TWNMVACSAEGFVVSLEMASMGLSGTLSP----- 103
++++ DL + W + + D C TW V C + + + ++ LSG P
Sbjct: 12 LQIKKDLGNPTTLSSW-LPTTDCCNRTWLGVLCDTD--TQTYRVNNLDLSGLNLPKPYPI 68
Query: 104 --SIGNLTHLRTMLLHN-NQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLT 160
S+ NL +L + + N L GPIP L++L L +++ + G IP L + L
Sbjct: 69 PSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLV 128
Query: 161 YLRLNNNKLSGQIPTLVA 178
L + N LSG +P ++
Sbjct: 129 TLDFSYNALSGTLPPSIS 146
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Query: 90 LEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEI 149
L + +SG + + + L T+ N LSG +P L L + N++ G I
Sbjct: 106 LYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAI 165
Query: 150 PSSLGFLTHL-TYLRLNNNKLSGQIPTLVA 178
P S G + L T + ++ N+L+G+IP A
Sbjct: 166 PDSYGSFSKLFTSMTISRNRLTGKIPPTFA 195
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 54/136 (39%), Gaps = 28/136 (20%)
Query: 62 VMDGWDINSVDPCTWNMVACSAEGFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQL 121
DG I+ P ++ S S+ ++ L+G + P+ NL +L + L N L
Sbjct: 155 TFDGNRISGAIPDSYG----SFSKLFTSMTISRNRLTGKIPPTFANL-NLAFVDLSRNML 209
Query: 122 SGPIPVEFG-----------------------MLSELQTLDLSNNQLVGEIPSSLGFLTH 158
G V FG + L LDL NN++ G +P L L
Sbjct: 210 EGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKF 269
Query: 159 LTYLRLNNNKLSGQIP 174
L L ++ N L G+IP
Sbjct: 270 LHSLNVSFNNLCGEIP 285
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAA 435
+V YMP G + LR + P H A+ +L + +I+RD+K
Sbjct: 118 MVMEYMPGGDMFSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 436 NILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGV 495
N+L+D+ V DFG AK + R T + GT ++APE + + ++ D + GV
Sbjct: 171 NLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 496 LLLELITG 503
L+ E+ G
Sbjct: 227 LIYEMAAG 234
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAA 435
+V YMP G + LR + P H A+ +L + +I+RD+K
Sbjct: 118 MVMEYMPGGDMFSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 436 NILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGV 495
N+L+D+ V DFG AK + R T + GT ++APE + + ++ D + GV
Sbjct: 171 NLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 496 LLLELITG 503
L+ E+ G
Sbjct: 227 LIYEMAAG 234
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 99/207 (47%), Gaps = 29/207 (14%)
Query: 311 LGQGGYGVVYKGCLPNRM--VVAVKRLKDPNFTGEV---QFQTEVEMIGLALHRNLLRLY 365
+G G YG V + R VA+K+L P F E+ + E+ ++ H N++ L
Sbjct: 33 VGSGAYGAVC-SAVDGRTGAKVAIKKLYRP-FQSELFAKRAYRELRLLKHMRHENVIGLL 90
Query: 366 GFCMTPEERL-------LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
TP+E L LV P+M D + + K L +R + +GL Y
Sbjct: 91 D-VFTPDETLDDFTDFYLVMPFMGT----DLGKLMKHEK--LGEDRIQFLVYQMLKGLRY 143
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPE- 477
+H IIHRD+K N+ ++E E + DFGLA+ + DS + V T + APE
Sbjct: 144 IHAAG---IIHRDLKPGNLAVNEDCELKILDFGLAR---QADSEMXGXV-VTRWYRAPEV 196
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQ 504
L+ + ++ D++ G ++ E+ITG+
Sbjct: 197 ILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 109/245 (44%), Gaps = 20/245 (8%)
Query: 302 TGNFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLK---DPNFTGEVQFQTEVEMIGLAL 357
+ +F K++LG+G YGVV P +VA+K+++ P F ++ E++++
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFA--LRTLREIKILKHFK 67
Query: 358 HRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLL 417
H N++ ++ Y+ + L + L + + T R +
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQM-LSDDHIQYFIYQTLRAVK 126
Query: 418 YLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRR---DSHVTTAVRGTVGHI 474
LH +IHRD+K +N+L++ + + V DFGLA+++D +S T G V +
Sbjct: 127 VLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFV 183
Query: 475 ------APE-YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLH 527
APE L++ + S DV+ G +L EL + + + Q +I + T H
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPH 243
Query: 528 EERRL 532
+ L
Sbjct: 244 SDNDL 248
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 107/232 (46%), Gaps = 24/232 (10%)
Query: 304 NFSPKNILGQGGYGVVYKGCLPNRM---VVAVKRLKDPNFTGEVQFQT--EVEMIGLALH 358
NF +G+G YGVVYK N++ VVA+K+++ T V E+ ++ H
Sbjct: 7 NFQKVEKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 359 RNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
N+++L T + LV+ ++ + + + + PL + L +GL +
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAF 121
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLD---RRDSHVTTAVRGTVGHIA 475
H +++HRD+K N+L++ + DFGLA+ R H T+ + A
Sbjct: 122 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRA 174
Query: 476 PEY-LSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTL 526
PE L S D++ G + E++T ++AL G+ ++ + + RTL
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ--LFRIFRTL 223
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 96/221 (43%), Gaps = 34/221 (15%)
Query: 304 NFSPKNILGQGGYGVVYKGCL--PNRMVVAVKRLKDPNFTG-------EVQFQTEVEMIG 354
N+ PK ILG+G VV + C+ P AVK + + TG EVQ E +
Sbjct: 18 NYEPKEILGRGVSSVV-RRCIHKPTCKEYAVKII---DVTGGGSFSAEEVQELREATLKE 73
Query: 355 LAL------HRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHI 408
+ + H N+++L T LV+ M G + D L + K L I
Sbjct: 74 VDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE----KVTLSEKETRKI 129
Query: 409 ALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVR 468
+ LH+ I+HRD+K NILLD+ + DFG + LD + +V
Sbjct: 130 MRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--LRSVC 184
Query: 469 GTVGHIAPEYLSTGQSS------EKTDVFGFGVLLLELITG 503
GT ++APE + + ++ D++ GV++ L+ G
Sbjct: 185 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 106/229 (46%), Gaps = 18/229 (7%)
Query: 304 NFSPKNILGQGGYGVVYKGCLPNRM---VVAVKRLKDPNFTGEVQFQT--EVEMIGLALH 358
NF +G+G YGVVYK N++ VVA+ +++ T V E+ ++ H
Sbjct: 4 NFQKVEKIGEGTYGVVYKAR--NKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 359 RNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
N+++L T + LV+ ++ + + + + PL + L +GL +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAF 118
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEY 478
H +++HRD+K N+L++ + DFGLA+ T V T+ + APE
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEI 174
Query: 479 -LSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTL 526
L S D++ G + E++T ++AL G+ ++ + + RTL
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ--LFRIFRTL 220
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 106/229 (46%), Gaps = 18/229 (7%)
Query: 304 NFSPKNILGQGGYGVVYKGCLPNRM---VVAVKRLKDPNFTGEVQFQT--EVEMIGLALH 358
NF +G+G YGVVYK N++ VVA+ +++ T V E+ ++ H
Sbjct: 3 NFQKVEKIGEGTYGVVYKAR--NKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 359 RNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
N+++L T + LV+ ++ + + + + PL + L +GL +
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAF 117
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEY 478
H +++HRD+K N+L++ + DFGLA+ T V T+ + APE
Sbjct: 118 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEI 173
Query: 479 -LSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTL 526
L S D++ G + E++T ++AL G+ ++ + + RTL
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ--LFRIFRTL 219
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 75/166 (45%), Gaps = 14/166 (8%)
Query: 349 EVEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHI 408
EV ++ + H N+++L+ T + LV Y G V D L W +
Sbjct: 56 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL-------VAHGWMKEKE- 107
Query: 409 ALGTARGLLYLHEQCNPK-IIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAV 467
A R ++ + C+ K I+HRD+KA N+LLD + DFG + + T
Sbjct: 108 ARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC- 166
Query: 468 RGTVGHIAPEYLSTGQSSE--KTDVFGFGVLLLELITGQKALDVGN 511
G+ + APE L G+ + + DV+ GV+L L++G D N
Sbjct: 167 -GSPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 210
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 109/245 (44%), Gaps = 20/245 (8%)
Query: 302 TGNFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLK---DPNFTGEVQFQTEVEMIGLAL 357
+ +F K++LG+G YGVV P +VA+K+++ P F ++ E++++
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFA--LRTLREIKILKHFK 67
Query: 358 HRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLL 417
H N++ ++ Y+ + L + L + + T R +
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQM-LSDDHIQYFIYQTLRAVK 126
Query: 418 YLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRR---DSHVTTAVRGTVGHI 474
LH +IHRD+K +N+L++ + + V DFGLA+++D +S T G ++
Sbjct: 127 VLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYV 183
Query: 475 ------APE-YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLH 527
APE L++ + S DV+ G +L EL + + + Q +I + T H
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPH 243
Query: 528 EERRL 532
+ L
Sbjct: 244 SDNDL 248
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 110/246 (44%), Gaps = 22/246 (8%)
Query: 302 TGNFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLK---DPNFTGEVQFQTEVEMIGLAL 357
+ +F K++LG+G YGVV P +VA+K+++ P F ++ E++++
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFA--LRTLREIKILKHFK 67
Query: 358 HRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLL 417
H N++ ++ Y+ + L + L + + T R +
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQM-LSDDHIQYFIYQTLRAVK 126
Query: 418 YLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDR----------RDSHVTTAV 467
LH +IHRD+K +N+L++ + + V DFGLA+++D + S +T V
Sbjct: 127 VLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXV 183
Query: 468 RGTVGHIAPE-YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTL 526
T + APE L++ + S DV+ G +L EL + + + Q +I + T
Sbjct: 184 -ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTP 242
Query: 527 HEERRL 532
H + L
Sbjct: 243 HSDNDL 248
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 89/205 (43%), Gaps = 27/205 (13%)
Query: 311 LGQGGYGVVY----KGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYG 366
LG G YG V K R + +K+ + EV ++ H N+++LY
Sbjct: 12 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 71
Query: 367 FCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPK 426
F LV G + D + RQ +D M L G YLH+
Sbjct: 72 FFEDKRNYYLVMEVYRGGELFDEII-LRQKFSEVDAAVIMKQVLS---GTTYLHKH---N 124
Query: 427 IIHRDVKAANILLD-ESFEAVVG--DFGLAKLLDRRDSHVTTAVR-----GTVGHIAPEY 478
I+HRD+K N+LL+ +S +A++ DFGL+ +H + GT +IAPE
Sbjct: 125 IVHRDLKPENLLLESKSRDALIKIVDFGLS-------AHFEVGGKMKERLGTAYYIAPEV 177
Query: 479 LSTGQSSEKTDVFGFGVLLLELITG 503
L + EK DV+ GV+L L+ G
Sbjct: 178 LRK-KYDEKCDVWSCGVILYILLCG 201
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 311 LGQGGYGVV---YKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLAL---HRNLLRL 364
+G+G YG+V Y N++ VA+K++ F + Q + I + L H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNV--NKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHENIIGI 86
Query: 365 YGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCN 424
P + Y+ + L + + L + + RGL Y+H +
Sbjct: 87 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH---S 142
Query: 425 PKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV--TTAVRGTVGHIAPEYLSTG 482
++HRD+K +N+LL+ + + + DFGLA++ D H T T + APE +
Sbjct: 143 ANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 483 QSSEKT-DVFGFGVLLLELITGQ 504
+ K+ D++ G +L E+++ +
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 311 LGQGGYGVV---YKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLAL---HRNLLRL 364
+G+G YG+V Y N++ VA+K++ F + Q + I + L H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNL--NKVRVAIKKISP--FEHQTYXQRTLREIKILLRFRHENIIGI 90
Query: 365 YGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCN 424
P + Y+ + L + + L + + RGL Y+H +
Sbjct: 91 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH---S 146
Query: 425 PKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV--TTAVRGTVGHIAPEYLSTG 482
++HRD+K +N+LL+ + + + DFGLA++ D H T T + APE +
Sbjct: 147 ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 483 QSSEKT-DVFGFGVLLLELITGQ 504
+ K+ D++ G +L E+++ +
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 311 LGQGGYGVV---YKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLAL---HRNLLRL 364
+G+G YG+V Y N++ VA+K++ F + Q + I + L H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNV--NKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHENIIGI 86
Query: 365 YGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCN 424
P + Y+ + L + + L + + RGL Y+H +
Sbjct: 87 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH---S 142
Query: 425 PKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV--TTAVRGTVGHIAPEYLSTG 482
++HRD+K +N+LL+ + + + DFGLA++ D H T T + APE +
Sbjct: 143 ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 483 QSSEKT-DVFGFGVLLLELITGQ 504
+ K+ D++ G +L E+++ +
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 75/166 (45%), Gaps = 14/166 (8%)
Query: 349 EVEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHI 408
EV ++ + H N+++L+ T + LV Y G V D L + K
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKE--------KE 114
Query: 409 ALGTARGLLYLHEQCNPK-IIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAV 467
A R ++ + C+ K I+HRD+KA N+LLD + DFG + + T
Sbjct: 115 ARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC- 173
Query: 468 RGTVGHIAPEYLSTGQSSE--KTDVFGFGVLLLELITGQKALDVGN 511
G+ + APE L G+ + + DV+ GV+L L++G D N
Sbjct: 174 -GSPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 75/166 (45%), Gaps = 14/166 (8%)
Query: 349 EVEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHI 408
EV ++ + H N+++L+ T + LV Y G V D L + K
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKE--------KE 114
Query: 409 ALGTARGLLYLHEQCNPK-IIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAV 467
A R ++ + C+ K I+HRD+KA N+LLD + DFG + + T
Sbjct: 115 ARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC- 173
Query: 468 RGTVGHIAPEYLSTGQSSE--KTDVFGFGVLLLELITGQKALDVGN 511
G+ + APE L G+ + + DV+ GV+L L++G D N
Sbjct: 174 -GSPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 75/166 (45%), Gaps = 14/166 (8%)
Query: 349 EVEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHI 408
EV ++ + H N+++L+ T + LV Y G V D L + K
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKE--------KE 114
Query: 409 ALGTARGLLYLHEQCNPK-IIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAV 467
A R ++ + C+ K I+HRD+KA N+LLD + DFG + + T
Sbjct: 115 ARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC- 173
Query: 468 RGTVGHIAPEYLSTGQSSE--KTDVFGFGVLLLELITGQKALDVGN 511
G+ + APE L G+ + + DV+ GV+L L++G D N
Sbjct: 174 -GSPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 74/166 (44%), Gaps = 14/166 (8%)
Query: 349 EVEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHI 408
EV ++ + H N+++L+ T + LV Y G V D L + K
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKE--------KE 114
Query: 409 ALGTARGLLYLHEQCNPK-IIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAV 467
A R ++ + C+ K I+HRD+KA N+LLD + DFG + + A
Sbjct: 115 ARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDAF 172
Query: 468 RGTVGHIAPEYLSTGQSSE--KTDVFGFGVLLLELITGQKALDVGN 511
G + APE L G+ + + DV+ GV+L L++G D N
Sbjct: 173 CGAPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 311 LGQGGYGVV---YKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLAL---HRNLLRL 364
+G+G YG+V Y N++ VA+K++ F + Q + I + L H N++ +
Sbjct: 33 IGEGAYGMVCSAYDNV--NKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHENIIGI 88
Query: 365 YGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCN 424
P + Y+ + L + + L + + RGL Y+H +
Sbjct: 89 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH---S 144
Query: 425 PKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV--TTAVRGTVGHIAPEYLSTG 482
++HRD+K +N+LL+ + + + DFGLA++ D H T T + APE +
Sbjct: 145 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 204
Query: 483 QSSEKT-DVFGFGVLLLELITGQ 504
+ K+ D++ G +L E+++ +
Sbjct: 205 KGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 311 LGQGGYGVV---YKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLAL---HRNLLRL 364
+G+G YG+V Y N++ VA+K++ F + Q + I + L H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNV--NKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHENIIGI 86
Query: 365 YGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCN 424
P + Y+ + L + + L + + RGL Y+H +
Sbjct: 87 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH---S 142
Query: 425 PKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV--TTAVRGTVGHIAPEYLSTG 482
++HRD+K +N+LL+ + + + DFGLA++ D H T T + APE +
Sbjct: 143 ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 483 QSSEKT-DVFGFGVLLLELITGQ 504
+ K+ D++ G +L E+++ +
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 95/204 (46%), Gaps = 19/204 (9%)
Query: 311 LGQGGYGVV---YKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLAL---HRNLLRL 364
+G+G YG+V Y N++ VA+K++ F + Q + I + L H N++ +
Sbjct: 51 IGEGAYGMVCSAYDNV--NKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHENIIGI 106
Query: 365 YGFCMTPEERLLVYPYMPNGSV-ADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQC 423
P + Y+ + AD + + L + + RGL Y+H
Sbjct: 107 NDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQH--LSNDHICYFLYQILRGLKYIH--- 161
Query: 424 NPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV--TTAVRGTVGHIAPEYLST 481
+ ++HRD+K +N+LL+ + + + DFGLA++ D H T T + APE +
Sbjct: 162 SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 221
Query: 482 GQSSEKT-DVFGFGVLLLELITGQ 504
+ K+ D++ G +L E+++ +
Sbjct: 222 SKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 311 LGQGGYGVV---YKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLAL---HRNLLRL 364
+G+G YG+V Y N++ VA+K++ F + Q + I + L H N++ +
Sbjct: 33 IGEGAYGMVCSAYDNV--NKVRVAIKKISP--FEHQTYCQRTLREIKILLAFRHENIIGI 88
Query: 365 YGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCN 424
P + Y+ + L + + L + + RGL Y+H +
Sbjct: 89 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH---S 144
Query: 425 PKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV--TTAVRGTVGHIAPEYLSTG 482
++HRD+K +N+LL+ + + + DFGLA++ D H T T + APE +
Sbjct: 145 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 204
Query: 483 QSSEKT-DVFGFGVLLLELITGQ 504
+ K+ D++ G +L E+++ +
Sbjct: 205 KGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 311 LGQGGYGVV---YKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLAL---HRNLLRL 364
+G+G YG+V Y N++ VA+K++ F + Q + I + L H N++ +
Sbjct: 39 IGEGAYGMVCSAYDNV--NKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHENIIGI 94
Query: 365 YGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCN 424
P + Y+ + L + + L + + RGL Y+H +
Sbjct: 95 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH---S 150
Query: 425 PKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV--TTAVRGTVGHIAPEYLSTG 482
++HRD+K +N+LL+ + + + DFGLA++ D H T T + APE +
Sbjct: 151 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 210
Query: 483 QSSEKT-DVFGFGVLLLELITGQ 504
+ K+ D++ G +L E+++ +
Sbjct: 211 KGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 311 LGQGGYGVV---YKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLAL---HRNLLRL 364
+G+G YG+V Y N++ VA+K++ F + Q + I + L H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNV--NKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHENIIGI 86
Query: 365 YGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCN 424
P + Y+ + L + + L + + RGL Y+H +
Sbjct: 87 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH---S 142
Query: 425 PKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV--TTAVRGTVGHIAPEYLSTG 482
++HRD+K +N+LL+ + + + DFGLA++ D H T T + APE +
Sbjct: 143 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 483 QSSEKT-DVFGFGVLLLELITGQ 504
+ K+ D++ G +L E+++ +
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 95/221 (42%), Gaps = 34/221 (15%)
Query: 304 NFSPKNILGQGGYGVVYKGCL--PNRMVVAVKRLKDPNFTG-------EVQFQTEVEMIG 354
N+ PK ILG+G VV + C+ P AVK + + TG EVQ E +
Sbjct: 18 NYEPKEILGRGVSSVV-RRCIHKPTCKEYAVKII---DVTGGGSFSAEEVQELREATLKE 73
Query: 355 LAL------HRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHI 408
+ + H N+++L T LV+ M G + D L + K L I
Sbjct: 74 VDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE----KVTLSEKETRKI 129
Query: 409 ALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVR 468
+ LH+ I+HRD+K NILLD+ + DFG + LD + V
Sbjct: 130 MRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--LREVC 184
Query: 469 GTVGHIAPEYLSTGQSS------EKTDVFGFGVLLLELITG 503
GT ++APE + + ++ D++ GV++ L+ G
Sbjct: 185 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 311 LGQGGYGVV---YKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLAL---HRNLLRL 364
+G+G YG+V Y N++ VA+K++ F + Q + I + L H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNL--NKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHENIIGI 90
Query: 365 YGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCN 424
P + Y+ + L + + L + + RGL Y+H +
Sbjct: 91 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH---S 146
Query: 425 PKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV--TTAVRGTVGHIAPEYLSTG 482
++HRD+K +N+LL+ + + + DFGLA++ D H T T + APE +
Sbjct: 147 ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 483 QSSEKT-DVFGFGVLLLELITGQ 504
+ K+ D++ G +L E+++ +
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 95/221 (42%), Gaps = 34/221 (15%)
Query: 304 NFSPKNILGQGGYGVVYKGCL--PNRMVVAVKRLKDPNFTG-------EVQFQTEVEMIG 354
N+ PK ILG+G VV + C+ P AVK + + TG EVQ E +
Sbjct: 5 NYEPKEILGRGVSSVV-RRCIHKPTCKEYAVKII---DVTGGGSFSAEEVQELREATLKE 60
Query: 355 LAL------HRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHI 408
+ + H N+++L T LV+ M G + D L + K L I
Sbjct: 61 VDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE----KVTLSEKETRKI 116
Query: 409 ALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVR 468
+ LH+ I+HRD+K NILLD+ + DFG + LD + V
Sbjct: 117 MRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--LREVC 171
Query: 469 GTVGHIAPEYLSTGQSS------EKTDVFGFGVLLLELITG 503
GT ++APE + + ++ D++ GV++ L+ G
Sbjct: 172 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 311 LGQGGYGVV---YKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLAL---HRNLLRL 364
+G+G YG+V Y N++ VA+K++ F + Q + I + L H N++ +
Sbjct: 33 IGEGAYGMVCSAYDNV--NKVRVAIKKISP--FEHQTYCQRTLREIKILLAFRHENIIGI 88
Query: 365 YGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCN 424
P + Y+ + L + + L + + RGL Y+H +
Sbjct: 89 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH---S 144
Query: 425 PKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV--TTAVRGTVGHIAPEYLSTG 482
++HRD+K +N+LL+ + + + DFGLA++ D H T T + APE +
Sbjct: 145 ANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 204
Query: 483 QSSEKT-DVFGFGVLLLELITGQ 504
+ K+ D++ G +L E+++ +
Sbjct: 205 KGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 311 LGQGGYGVV---YKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLAL---HRNLLRL 364
+G+G YG+V Y N++ VA+K++ F + Q + I + L H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNV--NKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHENIIGI 86
Query: 365 YGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCN 424
P + Y+ + L + + L + + RGL Y+H +
Sbjct: 87 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH---S 142
Query: 425 PKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV--TTAVRGTVGHIAPEYLSTG 482
++HRD+K +N+LL+ + + + DFGLA++ D H T T + APE +
Sbjct: 143 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 483 QSSEKT-DVFGFGVLLLELITGQ 504
+ K+ D++ G +L E+++ +
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 18/228 (7%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDP--NFTGEVQFQTEVEMIGLALHRN 360
N SP +G G YG V + VAVK+L P + + E+ ++ H N
Sbjct: 31 NLSP---IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 361 LLRLYGFCMTPEERLLVYP--YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++ L TP L + Y+ + L + + + D + + RGL Y
Sbjct: 88 VIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKY 145
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPE- 477
+H + IIHRD+K +N+ ++E E + DFGLA+ D T T + APE
Sbjct: 146 IH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE----MTGYVATRWYRAPEI 198
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
L+ ++ D++ G ++ EL+TG+ + Q +IL V T
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 246
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 102/217 (47%), Gaps = 20/217 (9%)
Query: 294 SFRELQIATGNFSPKNILGQGGYGVVYKGCLPN----RMVVAVKRLKDPNFTGEV---QF 346
S R+ +I +G+G +G V++G + M VA+K K N T + +F
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCK--NCTSDSVREKF 58
Query: 347 QTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRM 406
E + H ++++L G +T ++ G + L+ + + LD +
Sbjct: 59 LQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYS---LDLASLI 114
Query: 407 HIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTA 466
A + L YL + + +HRD+ A N+L+ + +GDFGL++ ++ DS A
Sbjct: 115 LYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME--DSTYYKA 169
Query: 467 VRGT--VGHIAPEYLSTGQSSEKTDVFGFGVLLLELI 501
+G + +APE ++ + + +DV+ FGV + E++
Sbjct: 170 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 311 LGQGGYGVV---YKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLAL---HRNLLRL 364
+G+G YG+V Y N++ VA+K++ F + Q + I + L H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNL--NKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHENIIGI 90
Query: 365 YGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCN 424
P + Y+ + L + + L + + RGL Y+H +
Sbjct: 91 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQH-LSNDHICYFLYQILRGLKYIH---S 146
Query: 425 PKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV--TTAVRGTVGHIAPEYLSTG 482
++HRD+K +N+LL+ + + + DFGLA++ D H T T + APE +
Sbjct: 147 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 483 QSSEKT-DVFGFGVLLLELITGQ 504
+ K+ D++ G +L E+++ +
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 311 LGQGGYGVV---YKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLAL---HRNLLRL 364
+G+G YG+V Y N++ VA+K++ F + Q + I + L H N++ +
Sbjct: 51 IGEGAYGMVCSAYDNV--NKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHENIIGI 106
Query: 365 YGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCN 424
P + Y+ + L + + L + + RGL Y+H +
Sbjct: 107 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH---S 162
Query: 425 PKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV--TTAVRGTVGHIAPEYLSTG 482
++HRD+K +N+LL+ + + + DFGLA++ D H T T + APE +
Sbjct: 163 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 222
Query: 483 QSSEKT-DVFGFGVLLLELITGQ 504
+ K+ D++ G +L E+++ +
Sbjct: 223 KGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 18/228 (7%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDP--NFTGEVQFQTEVEMIGLALHRN 360
N SP +G G YG V + VAVK+L P + + E+ ++ H N
Sbjct: 38 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHEN 94
Query: 361 LLRLYGFCMTPEERLLVYP--YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++ L TP L + Y+ + L + + + D + + RGL Y
Sbjct: 95 VIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKY 152
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPE- 477
+H + IIHRD+K +N+ ++E E + DFGLA+ D T T + APE
Sbjct: 153 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 205
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
L+ ++ D++ G ++ EL+TG+ + Q +IL V T
Sbjct: 206 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 253
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 311 LGQGGYGVV---YKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLAL---HRNLLRL 364
+G+G YG+V Y N++ VA+K++ F + Q + I + L H N++ +
Sbjct: 29 IGEGAYGMVCSAYDNL--NKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHENIIGI 84
Query: 365 YGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCN 424
P + Y+ + L + + L + + RGL Y+H +
Sbjct: 85 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH---S 140
Query: 425 PKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV--TTAVRGTVGHIAPEYLSTG 482
++HRD+K +N+LL+ + + + DFGLA++ D H T T + APE +
Sbjct: 141 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 200
Query: 483 QSSEKT-DVFGFGVLLLELITGQ 504
+ K+ D++ G +L E+++ +
Sbjct: 201 KGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 102/217 (47%), Gaps = 20/217 (9%)
Query: 294 SFRELQIATGNFSPKNILGQGGYGVVYKGCLPN----RMVVAVKRLKDPNFTGEV---QF 346
S R+ +I +G+G +G V++G + M VA+K K N T + +F
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCK--NCTSDSVREKF 58
Query: 347 QTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRM 406
E + H ++++L G +T ++ G + L+ + + LD +
Sbjct: 59 LQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKFS---LDLASLI 114
Query: 407 HIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTA 466
A + L YL + + +HRD+ A N+L+ + +GDFGL++ ++ DS A
Sbjct: 115 LYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME--DSTXXKA 169
Query: 467 VRGT--VGHIAPEYLSTGQSSEKTDVFGFGVLLLELI 501
+G + +APE ++ + + +DV+ FGV + E++
Sbjct: 170 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 311 LGQGGYGVV---YKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLAL---HRNLLRL 364
+G+G YG+V Y N++ VA+K++ F + Q + I + L H N++ +
Sbjct: 36 IGEGAYGMVCSAYDNL--NKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHENIIGI 91
Query: 365 YGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCN 424
P + Y+ + L + + L + + RGL Y+H +
Sbjct: 92 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH---S 147
Query: 425 PKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV--TTAVRGTVGHIAPEYLSTG 482
++HRD+K +N+LL+ + + + DFGLA++ D H T T + APE +
Sbjct: 148 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 207
Query: 483 QSSEKT-DVFGFGVLLLELITGQ 504
+ K+ D++ G +L E+++ +
Sbjct: 208 KGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 311 LGQGGYGVV---YKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLAL---HRNLLRL 364
+G+G YG+V Y N++ VA+K++ F + Q + I + L H N++ +
Sbjct: 29 IGEGAYGMVCSAYDNL--NKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHENIIGI 84
Query: 365 YGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCN 424
P + Y+ + L + + L + + RGL Y+H +
Sbjct: 85 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH---S 140
Query: 425 PKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV--TTAVRGTVGHIAPEYLSTG 482
++HRD+K +N+LL+ + + + DFGLA++ D H T T + APE +
Sbjct: 141 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 200
Query: 483 QSSEKT-DVFGFGVLLLELITGQ 504
+ K+ D++ G +L E+++ +
Sbjct: 201 KGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 311 LGQGGYGVV---YKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLAL---HRNLLRL 364
+G+G YG+V Y N++ VA+K++ F + Q + I + L H N++ +
Sbjct: 37 IGEGAYGMVCSAYDNL--NKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHENIIGI 92
Query: 365 YGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCN 424
P + Y+ + L + + L + + RGL Y+H +
Sbjct: 93 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH---S 148
Query: 425 PKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV--TTAVRGTVGHIAPEYLSTG 482
++HRD+K +N+LL+ + + + DFGLA++ D H T T + APE +
Sbjct: 149 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 208
Query: 483 QSSEKT-DVFGFGVLLLELITGQ 504
+ K+ D++ G +L E+++ +
Sbjct: 209 KGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 311 LGQGGYGVV---YKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLAL---HRNLLRL 364
+G+G YG+V Y N++ VA+K++ F + Q + I + L H N++ +
Sbjct: 28 IGEGAYGMVCSAYDNL--NKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHENIIGI 83
Query: 365 YGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCN 424
P + Y+ + L + + L + + RGL Y+H +
Sbjct: 84 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH---S 139
Query: 425 PKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV--TTAVRGTVGHIAPEYLSTG 482
++HRD+K +N+LL+ + + + DFGLA++ D H T T + APE +
Sbjct: 140 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 199
Query: 483 QSSEKT-DVFGFGVLLLELITGQ 504
+ K+ D++ G +L E+++ +
Sbjct: 200 KGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 311 LGQGGYGVV---YKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLAL---HRNLLRL 364
+G+G YG+V Y N++ VA+K++ F + Q + I + L H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNL--NKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHENIIGI 90
Query: 365 YGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCN 424
P + Y+ + L + + L + + RGL Y+H +
Sbjct: 91 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH---S 146
Query: 425 PKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV--TTAVRGTVGHIAPEYLSTG 482
++HRD+K +N+LL+ + + + DFGLA++ D H T T + APE +
Sbjct: 147 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 483 QSSEKT-DVFGFGVLLLELITGQ 504
+ K+ D++ G +L E+++ +
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 18/228 (7%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDP--NFTGEVQFQTEVEMIGLALHRN 360
N SP +G G YG V + VAVK+L P + + E+ ++ H N
Sbjct: 26 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 361 LLRLYGFCMTPEERLLVYP--YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++ L TP L + Y+ + L + + + D + + RGL Y
Sbjct: 83 VIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTD-DHVQFLIYQILRGLKY 140
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPE- 477
+H + IIHRD+K +N+ ++E E + DFGLA+ D T T + APE
Sbjct: 141 IH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE----MTGYVATRWYRAPEI 193
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
L+ ++ D++ G ++ EL+TG+ + Q +IL V T
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Query: 414 RGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGH 473
RGL Y+H + IIHRD+K +N+ ++E E + DFGLA+ D T T +
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWY 188
Query: 474 IAPE-YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
APE L+ ++ D++ G ++ EL+TG+ + Q +IL V T
Sbjct: 189 RAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 89/205 (43%), Gaps = 27/205 (13%)
Query: 311 LGQGGYGVVY----KGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYG 366
LG G YG V K R + +K+ + EV ++ H N+++LY
Sbjct: 29 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 88
Query: 367 FCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPK 426
F LV G + D + RQ +D M L G YLH+
Sbjct: 89 FFEDKRNYYLVMEVYRGGELFDEII-LRQKFSEVDAAVIMKQVLS---GTTYLHKH---N 141
Query: 427 IIHRDVKAANILLD-ESFEAVVG--DFGLAKLLDRRDSHVTTAVR-----GTVGHIAPEY 478
I+HRD+K N+LL+ +S +A++ DFGL+ +H + GT +IAPE
Sbjct: 142 IVHRDLKPENLLLESKSRDALIKIVDFGLS-------AHFEVGGKMKERLGTAYYIAPEV 194
Query: 479 LSTGQSSEKTDVFGFGVLLLELITG 503
L + EK DV+ GV+L L+ G
Sbjct: 195 LRK-KYDEKCDVWSCGVILYILLCG 218
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 88/200 (44%), Gaps = 18/200 (9%)
Query: 311 LGQGGYGVVYKGCLPNR---MVVAVKRL---KDPNFTGEVQFQTEVEMIGLALHRNLLRL 364
+G+G YGVV+K C NR +VA+K+ +D ++ + E+ M+ H NL+ L
Sbjct: 11 IGEGSYGVVFK-CR-NRDTGQIVAIKKFLESEDDPVIKKIALR-EIRMLKQLKHPNLVNL 67
Query: 365 YGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCN 424
LV+ Y + + + R R L I T + + + H+
Sbjct: 68 LEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHL----VKSITWQTLQAVNFCHKH-- 121
Query: 425 PKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYL-STGQ 483
IHRDVK NIL+ + + DFG A+LL + V T + +PE L Q
Sbjct: 122 -NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEV-ATRWYRSPELLVGDTQ 179
Query: 484 SSEKTDVFGFGVLLLELITG 503
DV+ G + EL++G
Sbjct: 180 YGPPVDVWAIGCVFAELLSG 199
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 76/169 (44%), Gaps = 20/169 (11%)
Query: 349 EVEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHI 408
EV ++ + H N+++L+ T + LV Y G V D L + K
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKE--------KE 114
Query: 409 ALGTARGLLYLHEQCNPK-IIHRDVKAANILLDESFEAVVGDFGLAKLL---DRRDSHVT 464
A R ++ + C+ K I+HRD+KA N+LLD + DFG + ++ D
Sbjct: 115 ARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFC- 173
Query: 465 TAVRGTVGHIAPEYLSTGQSSE--KTDVFGFGVLLLELITGQKALDVGN 511
G+ + APE L G+ + + DV+ GV+L L++G D N
Sbjct: 174 ----GSPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 18/228 (7%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDP--NFTGEVQFQTEVEMIGLALHRN 360
N SP +G G YG V + VAVK+L P + + E+ ++ H N
Sbjct: 37 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 93
Query: 361 LLRLYGFCMTPEERLLVYP--YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++ L TP L + Y+ + L + + + D + + RGL Y
Sbjct: 94 VIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKY 151
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPE- 477
+H + IIHRD+K +N+ ++E E + DFGLA+ D T T + APE
Sbjct: 152 IH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE----MTGYVATRWYRAPEI 204
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
L+ ++ D++ G ++ EL+TG+ + Q +IL V T
Sbjct: 205 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 252
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Query: 414 RGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGH 473
RGL Y+H + IIHRD+K +N+ ++E E + DFGLA+ D T T +
Sbjct: 141 RGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE----MTGYVATRWY 193
Query: 474 IAPE-YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
APE L+ ++ D++ G ++ EL+TG+ + Q +IL V T
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 246
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 18/228 (7%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDP--NFTGEVQFQTEVEMIGLALHRN 360
N SP +G G YG V + VAVK+L P + + E+ ++ H N
Sbjct: 32 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 361 LLRLYGFCMTPEERLLVYP--YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++ L TP L + Y+ + L + + + D + + RGL Y
Sbjct: 89 VIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKY 146
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPE- 477
+H + IIHRD+K +N+ ++E E + DFGLA+ D T T + APE
Sbjct: 147 IH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE----MTGYVATRWYRAPEI 199
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
L+ ++ D++ G ++ EL+TG+ + Q +IL V T
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 247
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 18/228 (7%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDP--NFTGEVQFQTEVEMIGLALHRN 360
N SP +G G YG V + VAVK+L P + + E+ ++ H N
Sbjct: 31 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 361 LLRLYGFCMTPEERLLVYP--YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++ L TP L + Y+ + L + + + D + + RGL Y
Sbjct: 88 VIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKY 145
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPE- 477
+H + IIHRD+K +N+ ++E E + DFGLA+ D T T + APE
Sbjct: 146 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 198
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
L+ ++ D++ G ++ EL+TG+ + Q +IL V T
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 246
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 18/228 (7%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDP--NFTGEVQFQTEVEMIGLALHRN 360
N SP +G G YG V + VAVK+L P + + E+ ++ H N
Sbjct: 32 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 361 LLRLYGFCMTPEERLLVYP--YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++ L TP L + Y+ + L + + + D + + RGL Y
Sbjct: 89 VIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKY 146
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPE- 477
+H + IIHRD+K +N+ ++E E + DFGLA+ D T T + APE
Sbjct: 147 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 199
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
L+ ++ D++ G ++ EL+TG+ + Q +IL V T
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 247
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 18/228 (7%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDP--NFTGEVQFQTEVEMIGLALHRN 360
N SP +G G YG V + VAVK+L P + + E+ ++ H N
Sbjct: 32 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 361 LLRLYGFCMTPEERLLVYP--YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++ L TP L + Y+ + L + + + D + + RGL Y
Sbjct: 89 VIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKY 146
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPE- 477
+H + IIHRD+K +N+ ++E E + DFGLA+ D T T + APE
Sbjct: 147 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 199
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
L+ ++ D++ G ++ EL+TG+ + Q +IL V T
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 247
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 18/228 (7%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDP--NFTGEVQFQTEVEMIGLALHRN 360
N SP +G G YG V + VAVK+L P + + E+ ++ H N
Sbjct: 28 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 361 LLRLYGFCMTPEERLLVYP--YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++ L TP L + Y+ + L + + + D + + RGL Y
Sbjct: 85 VIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKY 142
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPE- 477
+H + IIHRD+K +N+ ++E E + DFGLA+ D T T + APE
Sbjct: 143 IH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE----MTGYVATRWYRAPEI 195
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
L+ ++ D++ G ++ EL+TG+ + Q +IL V T
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 243
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 18/228 (7%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDP--NFTGEVQFQTEVEMIGLALHRN 360
N SP +G G YG V + VAVK+L P + + E+ ++ H N
Sbjct: 38 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 94
Query: 361 LLRLYGFCMTPEERLLVYP--YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++ L TP L + Y+ + L + + + D + + RGL Y
Sbjct: 95 VIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKY 152
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPE- 477
+H + IIHRD+K +N+ ++E E + DFGLA+ D T T + APE
Sbjct: 153 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 205
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
L+ ++ D++ G ++ EL+TG+ + Q +IL V T
Sbjct: 206 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 253
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 18/228 (7%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDP--NFTGEVQFQTEVEMIGLALHRN 360
N SP +G G YG V + VAVK+L P + + E+ ++ H N
Sbjct: 38 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 94
Query: 361 LLRLYGFCMTPEERLLVYP--YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++ L TP L + Y+ + L + + + D + + RGL Y
Sbjct: 95 VIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKY 152
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPE- 477
+H + IIHRD+K +N+ ++E E + DFGLA+ D T T + APE
Sbjct: 153 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 205
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
L+ ++ D++ G ++ EL+TG+ + Q +IL V T
Sbjct: 206 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 253
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 102/217 (47%), Gaps = 20/217 (9%)
Query: 294 SFRELQIATGNFSPKNILGQGGYGVVYKGCLPN----RMVVAVKRLKDPNFTGEV---QF 346
S R+ +I +G+G +G V++G + M VA+K K N T + +F
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCK--NCTSDSVREKF 58
Query: 347 QTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRM 406
E + H ++++L G +T ++ G + L+ + + LD +
Sbjct: 59 LQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKFS---LDLASLI 114
Query: 407 HIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTA 466
A + L YL + + +HRD+ A N+L+ + +GDFGL++ ++ DS A
Sbjct: 115 LYAYQLSTALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYME--DSTYYKA 169
Query: 467 VRGT--VGHIAPEYLSTGQSSEKTDVFGFGVLLLELI 501
+G + +APE ++ + + +DV+ FGV + E++
Sbjct: 170 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAA 435
+V Y+P G + LR + P H A+ +L + +I+RD+K
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 436 NILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGV 495
N+L+D+ V DFG AK + R T + GT ++APE + + ++ D + GV
Sbjct: 171 NLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 496 LLLELITG 503
L+ E+ G
Sbjct: 227 LIYEMAAG 234
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 96/225 (42%), Gaps = 28/225 (12%)
Query: 296 RELQIATGNFSPKNILGQGGYGVVY----KGCLPNRMVVAVK-------RLKDPNFTGEV 344
+E +I F + LG G YG V K + + +K R D N E
Sbjct: 30 KEGKIGESYFKVRK-LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEK 88
Query: 345 ---QFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLD 401
+ E+ ++ H N+++L+ + LV + G + + + + + D
Sbjct: 89 FHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIIN----RHKFD 144
Query: 402 WNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDES---FEAVVGDFGLAKLLDR 458
+I G+ YLH+ I+HRD+K NILL+ + DFGL+
Sbjct: 145 ECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFF-S 200
Query: 459 RDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITG 503
+D + + GT +IAPE L + +EK DV+ GV++ L+ G
Sbjct: 201 KDYKLRDRL-GTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCG 243
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 18/228 (7%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDP--NFTGEVQFQTEVEMIGLALHRN 360
N SP +G G YG V + VAVK+L P + + E+ ++ H N
Sbjct: 28 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 361 LLRLYGFCMTPEERLLVYP--YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++ L TP L + Y+ + L + + + D + + RGL Y
Sbjct: 85 VIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKY 142
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPE- 477
+H + IIHRD+K +N+ ++E E + DFGLA+ D T T + APE
Sbjct: 143 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 195
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
L+ ++ D++ G ++ EL+TG+ + Q +IL V T
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 243
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 18/228 (7%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDP--NFTGEVQFQTEVEMIGLALHRN 360
N SP +G G YG V + VAVK+L P + + E+ ++ H N
Sbjct: 23 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 79
Query: 361 LLRLYGFCMTPEERLLVYP--YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++ L TP L + Y+ + L + + + D + + RGL Y
Sbjct: 80 VIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKY 137
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPE- 477
+H + IIHRD+K +N+ ++E E + DFGLA+ D T T + APE
Sbjct: 138 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 190
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
L+ ++ D++ G ++ EL+TG+ + Q +IL V T
Sbjct: 191 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 238
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 18/228 (7%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDP--NFTGEVQFQTEVEMIGLALHRN 360
N SP +G G YG V + VAVK+L P + + E+ ++ H N
Sbjct: 26 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 361 LLRLYGFCMTPEERLLVYP--YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++ L TP L + Y+ + L + + + D + + RGL Y
Sbjct: 83 VIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKY 140
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPE- 477
+H + IIHRD+K +N+ ++E E + DFGLA+ D T T + APE
Sbjct: 141 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGXVATRWYRAPEI 193
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
L+ ++ D++ G ++ EL+TG+ + Q +IL V T
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 18/228 (7%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDP--NFTGEVQFQTEVEMIGLALHRN 360
N SP +G G YG V + VAVK+L P + + E+ ++ H N
Sbjct: 28 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 361 LLRLYGFCMTPEERLLVYP--YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++ L TP L + Y+ + L + + + D + + RGL Y
Sbjct: 85 VIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKY 142
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPE- 477
+H + IIHRD+K +N+ ++E E + DFGLA+ D T T + APE
Sbjct: 143 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 195
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
L+ ++ D++ G ++ EL+TG+ + Q +IL V T
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 243
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 18/228 (7%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDP--NFTGEVQFQTEVEMIGLALHRN 360
N SP +G G YG V + VAVK+L P + + E+ ++ H N
Sbjct: 26 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 361 LLRLYGFCMTPEERLLVYP--YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++ L TP L + Y+ + L + + + D + + RGL Y
Sbjct: 83 VIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTD-DHVQFLIYQILRGLKY 140
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPE- 477
+H + IIHRD+K +N+ ++E E + DFGLA+ D T T + APE
Sbjct: 141 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 193
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
L+ ++ D++ G ++ EL+TG+ + Q +IL V T
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 18/228 (7%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDP--NFTGEVQFQTEVEMIGLALHRN 360
N SP +G G YG V + VAVK+L P + + E+ ++ H N
Sbjct: 26 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 361 LLRLYGFCMTPEERLLVYP--YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++ L TP L + Y+ + L + + + D + + RGL Y
Sbjct: 83 VIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKY 140
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPE- 477
+H + IIHRD+K +N+ ++E E + DFGLA+ D T T + APE
Sbjct: 141 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 193
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
L+ ++ D++ G ++ EL+TG+ + Q +IL V T
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 18/228 (7%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDP--NFTGEVQFQTEVEMIGLALHRN 360
N SP +G G YG V + VAVK+L P + + E+ ++ H N
Sbjct: 26 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 361 LLRLYGFCMTPEERLLVYP--YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++ L TP L + Y+ + L + + + D + + RGL Y
Sbjct: 83 VIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKY 140
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPE- 477
+H + IIHRD+K +N+ ++E E + DFGLA+ D T T + APE
Sbjct: 141 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 193
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
L+ ++ D++ G ++ EL+TG+ + Q +IL V T
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 18/228 (7%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDP--NFTGEVQFQTEVEMIGLALHRN 360
N SP +G G YG V + VAVK+L P + + E+ ++ H N
Sbjct: 26 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 361 LLRLYGFCMTPEERLLVYP--YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++ L TP L + Y+ + L + + + D + + RGL Y
Sbjct: 83 VIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKY 140
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPE- 477
+H + IIHRD+K +N+ ++E E + DFGLA+ D T T + APE
Sbjct: 141 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 193
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
L+ ++ D++ G ++ EL+TG+ + Q +IL V T
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 18/228 (7%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDP--NFTGEVQFQTEVEMIGLALHRN 360
N SP +G G YG V + VAVK+L P + + E+ ++ H N
Sbjct: 24 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 80
Query: 361 LLRLYGFCMTPEERLLVYP--YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++ L TP L + Y+ + L + + + D + + RGL Y
Sbjct: 81 VIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKY 138
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPE- 477
+H + IIHRD+K +N+ ++E E + DFGLA+ D T T + APE
Sbjct: 139 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 191
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
L+ ++ D++ G ++ EL+TG+ + Q +IL V T
Sbjct: 192 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 239
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 61/114 (53%), Gaps = 10/114 (8%)
Query: 414 RGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGH 473
RGL Y+H + IIHRD+K +N+ ++E E + DFGLA+ D T T +
Sbjct: 134 RGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEE----MTGYVATRWY 186
Query: 474 IAPE-YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQV-QKGMILDCVRT 525
APE L+ ++ D++ G ++ EL+ G KAL G+ + Q I++ V T
Sbjct: 187 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQG-KALFPGSDYIDQLKRIMEVVGT 239
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 18/228 (7%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDP--NFTGEVQFQTEVEMIGLALHRN 360
N SP +G G YG V + VAVK+L P + + E+ ++ H N
Sbjct: 33 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 361 LLRLYGFCMTPEERLLVYP--YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++ L TP L + Y+ + L + + + D + + RGL Y
Sbjct: 90 VIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKY 147
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPE- 477
+H + IIHRD+K +N+ ++E E + DFGLA+ D T T + APE
Sbjct: 148 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 200
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
L+ ++ D++ G ++ EL+TG+ + Q +IL V T
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 248
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 18/228 (7%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDP--NFTGEVQFQTEVEMIGLALHRN 360
N SP +G G YG V + VAVK+L P + + E+ ++ H N
Sbjct: 45 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 101
Query: 361 LLRLYGFCMTPEERLLVYP--YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++ L TP L + Y+ + L + + + D + + RGL Y
Sbjct: 102 VIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKY 159
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPE- 477
+H + IIHRD+K +N+ ++E E + DFGLA+ D T T + APE
Sbjct: 160 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 212
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
L+ ++ D++ G ++ EL+TG+ + Q +IL V T
Sbjct: 213 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 260
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 18/228 (7%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDP--NFTGEVQFQTEVEMIGLALHRN 360
N SP +G G YG V + VAVK+L P + + E+ ++ H N
Sbjct: 37 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 93
Query: 361 LLRLYGFCMTPEERLLVYP--YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++ L TP L + Y+ + L + + + D + + RGL Y
Sbjct: 94 VIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKY 151
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPE- 477
+H + IIHRD+K +N+ ++E E + DFGLA+ D T T + APE
Sbjct: 152 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 204
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
L+ ++ D++ G ++ EL+TG+ + Q +IL V T
Sbjct: 205 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 252
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 18/228 (7%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDP--NFTGEVQFQTEVEMIGLALHRN 360
N SP +G G YG V + VAVK+L P + + E+ ++ H N
Sbjct: 26 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 361 LLRLYGFCMTPEERLLVYP--YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++ L TP L + Y+ + L + + + D + + RGL Y
Sbjct: 83 VIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKY 140
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPE- 477
+H + IIHRD+K +N+ ++E E + DFGLA+ D T T + APE
Sbjct: 141 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 193
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
L+ ++ D++ G ++ EL+TG+ + Q +IL V T
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 18/228 (7%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDP--NFTGEVQFQTEVEMIGLALHRN 360
N SP +G G YG V + VAVK+L P + + E+ ++ H N
Sbjct: 31 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 361 LLRLYGFCMTPEERLLVYP--YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++ L TP L + Y+ + L + + + D + + RGL Y
Sbjct: 88 VIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKY 145
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPE- 477
+H + IIHRD+K +N+ ++E E + DFGLA+ D T T + APE
Sbjct: 146 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 198
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
L+ ++ D++ G ++ EL+TG+ + Q +IL V T
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 246
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 18/228 (7%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDP--NFTGEVQFQTEVEMIGLALHRN 360
N SP +G G YG V + VAVK+L P + + E+ ++ H N
Sbjct: 25 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 81
Query: 361 LLRLYGFCMTPEERLLVYP--YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++ L TP L + Y+ + L + + + D + + RGL Y
Sbjct: 82 VIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKY 139
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPE- 477
+H + IIHRD+K +N+ ++E E + DFGLA+ D T T + APE
Sbjct: 140 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 192
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
L+ ++ D++ G ++ EL+TG+ + Q +IL V T
Sbjct: 193 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 240
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 18/228 (7%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDP--NFTGEVQFQTEVEMIGLALHRN 360
N SP +G G YG V + VAVK+L P + + E+ ++ H N
Sbjct: 23 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 79
Query: 361 LLRLYGFCMTPEERLLVYP--YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++ L TP L + Y+ + L + + + D + + RGL Y
Sbjct: 80 VIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKY 137
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPE- 477
+H + IIHRD+K +N+ ++E E + DFGLA+ D T T + APE
Sbjct: 138 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 190
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
L+ ++ D++ G ++ EL+TG+ + Q +IL V T
Sbjct: 191 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 238
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 18/228 (7%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDP--NFTGEVQFQTEVEMIGLALHRN 360
N SP +G G YG V + VAVK+L P + + E+ ++ H N
Sbjct: 26 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 361 LLRLYGFCMTPEERLLVYP--YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++ L TP L + Y+ + L + + + D + + RGL Y
Sbjct: 83 VIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKY 140
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPE- 477
+H + IIHRD+K +N+ ++E E + DFGLA+ D T T + APE
Sbjct: 141 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 193
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
L+ ++ D++ G ++ EL+TG+ + Q +IL V T
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 89/206 (43%), Gaps = 15/206 (7%)
Query: 305 FSPKNILGQGGYGVVY----KGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRN 360
F K LG G +G V+ + R++ + KD + Q + E+E++ H N
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTIN--KDRSQVPMEQIEAEIEVLKSLDHPN 81
Query: 361 LLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLH 420
+++++ +V G + + + + L + L Y H
Sbjct: 82 IIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH 141
Query: 421 EQCNPKIIHRDVKAANILLDES---FEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPE 477
Q ++H+D+K NIL ++ + DFGLA+L + D H T A GT ++APE
Sbjct: 142 SQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF-KSDEHSTNAA-GTALYMAPE 196
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITG 503
+ K D++ GV++ L+TG
Sbjct: 197 VFKRDVTF-KCDIWSAGVVMYFLLTG 221
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Query: 414 RGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGH 473
RGL Y+H + IIHRD+K +N+ ++E E + DFGLA+ D T T +
Sbjct: 132 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWY 184
Query: 474 IAPE-YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
APE L+ ++ D++ G ++ EL+TG+ + Q +IL V T
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 237
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 18/228 (7%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDP--NFTGEVQFQTEVEMIGLALHRN 360
N SP +G G YG V + VAVK+L P + + E+ ++ H N
Sbjct: 26 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 361 LLRLYGFCMTPEERLLVYP--YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++ L TP L + Y+ + L + + + D + + RGL Y
Sbjct: 83 VIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKY 140
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPE- 477
+H + IIHRD+K +N+ ++E E + DFGLA+ D T T + APE
Sbjct: 141 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 193
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
L+ ++ D++ G ++ EL+TG+ + Q +IL V T
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Query: 414 RGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGH 473
RGL Y+H + IIHRD+K +N+ ++E E + DFGLA+ D T T +
Sbjct: 138 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWY 190
Query: 474 IAPE-YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
APE L+ ++ D++ G ++ EL+TG+ + Q +IL V T
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 243
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Query: 414 RGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGH 473
RGL Y+H + IIHRD+K +N+ ++E E + DFGLA+ D T T +
Sbjct: 146 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWY 198
Query: 474 IAPE-YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
APE L+ ++ D++ G ++ EL+TG+ + Q +IL V T
Sbjct: 199 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 251
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 18/228 (7%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDP--NFTGEVQFQTEVEMIGLALHRN 360
N SP +G G YG V + VAVK+L P + + E+ ++ H N
Sbjct: 26 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 361 LLRLYGFCMTPEERLLVYP--YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++ L TP L + Y+ + L + + + D + + RGL Y
Sbjct: 83 VIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKY 140
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPE- 477
+H + IIHRD+K +N+ ++E E + DFGLA+ D T T + APE
Sbjct: 141 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 193
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
L+ ++ D++ G ++ EL+TG+ + Q +IL V T
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Query: 414 RGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGH 473
RGL Y+H + IIHRD+K +N+ ++E E + DFGLA+ D T T +
Sbjct: 142 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWY 194
Query: 474 IAPE-YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
APE L+ ++ D++ G ++ EL+TG+ + Q +IL V T
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 247
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 18/228 (7%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDP--NFTGEVQFQTEVEMIGLALHRN 360
N SP +G G YG V + VAVK+L P + + E+ ++ H N
Sbjct: 22 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 361 LLRLYGFCMTPEERLLVYP--YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++ L TP L + Y+ + L + + + D + + RGL Y
Sbjct: 79 VIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKY 136
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPE- 477
+H + IIHRD+K +N+ ++E E + DFGLA+ D T T + APE
Sbjct: 137 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 189
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
L+ ++ D++ G ++ EL+TG+ + Q +IL V T
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 237
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 18/228 (7%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDP--NFTGEVQFQTEVEMIGLALHRN 360
N SP +G G YG V + VAVK+L P + + E+ ++ H N
Sbjct: 49 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 105
Query: 361 LLRLYGFCMTPEERLLVYP--YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++ L TP L + Y+ + L + + + D + + RGL Y
Sbjct: 106 VIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKY 163
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPE- 477
+H + IIHRD+K +N+ ++E E + DFGLA+ D T T + APE
Sbjct: 164 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 216
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
L+ ++ D++ G ++ EL+TG+ + Q +IL V T
Sbjct: 217 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 264
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Query: 414 RGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGH 473
RGL Y+H + IIHRD+K +N+ ++E E + DFGLA+ D T T +
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWY 188
Query: 474 IAPE-YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
APE L+ ++ D++ G ++ EL+TG+ + Q +IL V T
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 18/228 (7%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDP--NFTGEVQFQTEVEMIGLALHRN 360
N SP +G G YG V + VAVK+L P + + E+ ++ H N
Sbjct: 46 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 102
Query: 361 LLRLYGFCMTPEERLLVYP--YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++ L TP L + Y+ + L + + + D + + RGL Y
Sbjct: 103 VIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKY 160
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPE- 477
+H + IIHRD+K +N+ ++E E + DFGLA+ D T T + APE
Sbjct: 161 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEI 213
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
L+ ++ D++ G ++ EL+TG+ + Q +IL V T
Sbjct: 214 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 261
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 61/114 (53%), Gaps = 10/114 (8%)
Query: 414 RGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGH 473
RGL Y+H + IIHRD+K +N+ ++E E + DFGLA+ D T T +
Sbjct: 142 RGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEE----MTGYVATRWY 194
Query: 474 IAPE-YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQV-QKGMILDCVRT 525
APE L+ ++ D++ G ++ EL+ G KAL G+ + Q I++ V T
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQG-KALFPGSDYIDQLKRIMEVVGT 247
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 18/228 (7%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDP--NFTGEVQFQTEVEMIGLALHRN 360
N SP +G G YG V + VAVK+L P + + E+ ++ H N
Sbjct: 33 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 361 LLRLYGFCMTPEERLLVYP--YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++ L TP L + Y+ + L + + + D + + RGL Y
Sbjct: 90 VIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKY 147
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPE- 477
+H + IIHRD+K +N+ ++E E + DFGLA R + T T + APE
Sbjct: 148 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTADEMTGYVATRWYRAPEI 200
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
L+ ++ D++ G ++ EL+TG+ + Q +IL V T
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 248
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Query: 414 RGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGH 473
RGL Y+H + IIHRD+K +N+ ++E E + DFGLA+ D T T +
Sbjct: 156 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWY 208
Query: 474 IAPE-YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
APE L+ ++ D++ G ++ EL+TG+ + Q +IL V T
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 261
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Query: 414 RGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGH 473
RGL Y+H + IIHRD+K +N+ ++E E + DFGLA+ D T T +
Sbjct: 132 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWY 184
Query: 474 IAPE-YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
APE L+ ++ D++ G ++ EL+TG+ + Q +IL V T
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 237
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 18/228 (7%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDP--NFTGEVQFQTEVEMIGLALHRN 360
N SP +G G YG V + VAVK+L P + + E+ ++ H N
Sbjct: 33 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 361 LLRLYGFCMTPEERLLVYP--YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++ L TP L + Y+ + L + + + D + + RGL Y
Sbjct: 90 VIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKY 147
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPE- 477
+H + IIHRD+K +N+ ++E E + DFGLA R + T T + APE
Sbjct: 148 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTADEMTGYVATRWYRAPEI 200
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
L+ ++ D++ G ++ EL+TG+ + Q +IL V T
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 248
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Query: 414 RGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGH 473
RGL Y+H + IIHRD+K +N+ ++E E + DFGLA+ D T T +
Sbjct: 155 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWY 207
Query: 474 IAPE-YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
APE L+ ++ D++ G ++ EL+TG+ + Q +IL V T
Sbjct: 208 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 260
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 61/114 (53%), Gaps = 10/114 (8%)
Query: 414 RGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGH 473
RGL Y+H + IIHRD+K +N+ ++E E + DFGLA+ D T T +
Sbjct: 142 RGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEE----MTGYVATRWY 194
Query: 474 IAPE-YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQV-QKGMILDCVRT 525
APE L+ ++ D++ G ++ EL+ G KAL G+ + Q I++ V T
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQG-KALFPGSDYIDQLKRIMEVVGT 247
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 18/228 (7%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDP--NFTGEVQFQTEVEMIGLALHRN 360
N SP +G G YG V + VAVK+L P + + E+ ++ H N
Sbjct: 33 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 361 LLRLYGFCMTPEERLLVYP--YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++ L TP L + Y+ + L + + + D + + RGL Y
Sbjct: 90 VIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKY 147
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPE- 477
+H + IIHRD+K +N+ ++E E + DFGLA R + T T + APE
Sbjct: 148 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTADEMTGYVATRWYRAPEI 200
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
L+ ++ D++ G ++ EL+TG+ + Q +IL V T
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 248
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 73/166 (43%), Gaps = 14/166 (8%)
Query: 349 EVEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHI 408
EV + + H N+++L+ T + LV Y G V D L + K
Sbjct: 63 EVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKE--------KE 114
Query: 409 ALGTARGLLYLHEQCNPK-IIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAV 467
A R ++ + C+ K I+HRD+KA N+LLD + DFG + + A
Sbjct: 115 ARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTF--GNKLDAF 172
Query: 468 RGTVGHIAPEYLSTGQSSE--KTDVFGFGVLLLELITGQKALDVGN 511
G + APE L G+ + + DV+ GV+L L++G D N
Sbjct: 173 CGAPPYAAPE-LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 94/202 (46%), Gaps = 20/202 (9%)
Query: 310 ILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQT-----EVEMIGLALHRNLLRL 364
+LG+G +G V K C +R+ +K N T EVE++ H N+++L
Sbjct: 29 MLGKGSFGEVLK-C-KDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL 86
Query: 365 YGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCN 424
+ +V G + D + R+ D R I G+ Y+H+
Sbjct: 87 FEILEDSSSFYIVGELYTGGELFDEII-KRKRFSEHDAAR---IIKQVFSGITYMHKH-- 140
Query: 425 PKIIHRDVKAANILL---DESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLST 481
I+HRD+K NILL ++ + + DFGL+ ++++ + + GT +IAPE L
Sbjct: 141 -NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF-QQNTKMKDRI-GTAYYIAPEVLR- 196
Query: 482 GQSSEKTDVFGFGVLLLELITG 503
G EK DV+ GV+L L++G
Sbjct: 197 GTYDEKCDVWSAGVILYILLSG 218
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAA 435
+V Y+P G + LR + P H A+ +L + +I+RD+K
Sbjct: 104 MVMEYVPGGEMFSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHSLDLIYRDLKPE 156
Query: 436 NILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGV 495
N+L+D+ V DFG AK + R T + GT ++APE + + ++ D + GV
Sbjct: 157 NLLIDQQGYIQVTDFGFAKRVKGR----TWTLCGTPEYLAPEIILSKGYNKAVDWWALGV 212
Query: 496 LLLELITG 503
L+ E+ G
Sbjct: 213 LIYEMAAG 220
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 116/268 (43%), Gaps = 54/268 (20%)
Query: 308 KNILGQGGYG-VVYKGCLPNRMVVAVKRLKDPNFTG----EVQFQTEVEMIGLALHRNLL 362
+ ILG G G VV++G R VAVKR+ +F E++ TE + H N++
Sbjct: 20 EKILGYGSSGTVVFQGSFQGR-PVAVKRML-IDFCDIALMEIKLLTESDD-----HPNVI 72
Query: 363 RLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMH-----IAL--GTARG 415
R Y C +R L Y+ L+D ++K D N ++ I+L A G
Sbjct: 73 RYY--CSETTDRFL---YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASG 127
Query: 416 LLYLHEQCNPKIIHRDVKAANILLD-------------ESFEAVVGDFGLAKLLDRRDSH 462
+ +LH KIIHRD+K NIL+ E+ ++ DFGL K LD S
Sbjct: 128 VAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSS 184
Query: 463 VTTAVR---GTVGHIAPEYLSTGQS-------SEKTDVFGFGVLLLELITGQKALDVGNG 512
T + GT G APE L + + D+F G + +++ K G+
Sbjct: 185 FRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKH-PFGDK 243
Query: 513 QVQKGMILDCVRTLHEERRLDVLIDRDL 540
++ I+ + +L E + L DR L
Sbjct: 244 YSRESNIIRGIFSLDE---MKCLHDRSL 268
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 98/215 (45%), Gaps = 18/215 (8%)
Query: 296 RELQIATGNFSPKNILGQGGYGVVYK-GCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIG 354
+ ++ + P LG+G YGVV K +P+ ++AVKR++ T Q Q + M
Sbjct: 44 QNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRA---TVNSQEQKRLLMDL 100
Query: 355 LALHRNL-----LRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIA 409
R + + YG + + M + S+ + + + IA
Sbjct: 101 DISMRTVDCPFTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIA 159
Query: 410 LGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRG 469
+ + L +LH + + +IHRDVK +N+L++ + + DFG++ L DS T G
Sbjct: 160 VSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYL--VDSVAKTIDAG 215
Query: 470 TVGHIAPEY----LSTGQSSEKTDVFGFGVLLLEL 500
++APE L+ S K+D++ G+ ++EL
Sbjct: 216 CKPYMAPERINPELNQKGYSVKSDIWSLGITMIEL 250
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAA 435
+V Y+P G + LR + P H A+ +L + +I+RD+K
Sbjct: 119 MVMEYVPGGEMFSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHSLDLIYRDLKPE 171
Query: 436 NILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGV 495
N+L+D+ V DFG AK + R T + GT ++APE + + ++ D + GV
Sbjct: 172 NLLIDQQGYIQVTDFGFAKRVKGR----TWTLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 496 LLLELITG 503
L+ E+ G
Sbjct: 228 LIYEMAAG 235
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 99/215 (46%), Gaps = 16/215 (7%)
Query: 294 SFRELQIATGNFSPKNILGQGGYGVVYKGCL--PNRMVVAVKRLKDPNFTGEV---QFQT 348
S R+ +I +G+G +G V++G P +AV N T + +F
Sbjct: 29 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 88
Query: 349 EVEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHI 408
E + H ++++L G +T ++ G + L+ + + LD +
Sbjct: 89 EALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYS---LDLASLILY 144
Query: 409 ALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVR 468
A + L YL + + +HRD+ A N+L+ + +GDFGL++ ++ DS A +
Sbjct: 145 AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME--DSTYYKASK 199
Query: 469 GT--VGHIAPEYLSTGQSSEKTDVFGFGVLLLELI 501
G + +APE ++ + + +DV+ FGV + E++
Sbjct: 200 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 99/228 (43%), Gaps = 26/228 (11%)
Query: 305 FSPKNILGQGGYGVVY----KGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRN 360
F ++ LG+G +VY KG + +K+ D +TE+ ++ H N
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIV-----RTEIGVLLRLSHPN 109
Query: 361 LLRLYGFCMTPEERLLVYPYMPNGSVADCL--RDTRQAKPPLDWNRRMHIALGTARGLLY 418
+++L TP E LV + G + D + + + D +++ A+ Y
Sbjct: 110 IIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVA------Y 163
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAV---VGDFGLAKLLDRRDSHVTTAVRGTVGHIA 475
LHE I+HRD+K N+L + DFGL+K+++ + + V GT G+ A
Sbjct: 164 LHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ--VLMKTVCGTPGYCA 218
Query: 476 PEYLSTGQSSEKTDVFGFGVLLLELITG-QKALDVGNGQVQKGMILDC 522
PE L + D++ G++ L+ G + D Q IL+C
Sbjct: 219 PEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNC 266
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 311 LGQGGYGVV---YKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLAL---HRNLLRL 364
+G+G YG+V Y N++ VA++++ F + Q + I + L H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNL--NKVRVAIRKISP--FEHQTYCQRTLREIKILLRFRHENIIGI 90
Query: 365 YGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCN 424
P + Y+ + L + + L + + RGL Y+H +
Sbjct: 91 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH---S 146
Query: 425 PKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV--TTAVRGTVGHIAPEYLSTG 482
++HRD+K +N+LL+ + + + DFGLA++ D H T T + APE +
Sbjct: 147 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 483 QSSEKT-DVFGFGVLLLELITGQ 504
+ K+ D++ G +L E+++ +
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 99/215 (46%), Gaps = 16/215 (7%)
Query: 294 SFRELQIATGNFSPKNILGQGGYGVVYKGCL--PNRMVVAVKRLKDPNFTGEV---QFQT 348
S R+ +I +G+G +G V++G P +AV N T + +F
Sbjct: 6 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 65
Query: 349 EVEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHI 408
E + H ++++L G +T ++ G + L+ + + LD +
Sbjct: 66 EALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYS---LDLASLILY 121
Query: 409 ALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVR 468
A + L YL + + +HRD+ A N+L+ + +GDFGL++ ++ DS A +
Sbjct: 122 AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME--DSTYYKASK 176
Query: 469 GT--VGHIAPEYLSTGQSSEKTDVFGFGVLLLELI 501
G + +APE ++ + + +DV+ FGV + E++
Sbjct: 177 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 99/215 (46%), Gaps = 16/215 (7%)
Query: 294 SFRELQIATGNFSPKNILGQGGYGVVYKGCL--PNRMVVAVKRLKDPNFTGEV---QFQT 348
S R+ +I +G+G +G V++G P +AV N T + +F
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 60
Query: 349 EVEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHI 408
E + H ++++L G +T ++ G + L+ + + LD +
Sbjct: 61 EALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYS---LDLASLILY 116
Query: 409 ALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVR 468
A + L YL + + +HRD+ A N+L+ + +GDFGL++ ++ DS A +
Sbjct: 117 AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME--DSTYYKASK 171
Query: 469 GT--VGHIAPEYLSTGQSSEKTDVFGFGVLLLELI 501
G + +APE ++ + + +DV+ FGV + E++
Sbjct: 172 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHI 474
L YLH + N +++RD+K N++LD+ + DFGL K +D GT ++
Sbjct: 263 ALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKTFCGTPEYL 319
Query: 475 APEYLSTGQSSEKTDVFGFGVLLLELITGQ 504
APE L D +G GV++ E++ G+
Sbjct: 320 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHI 474
L YLH + N +++RD+K N++LD+ + DFGL K +D GT ++
Sbjct: 260 ALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKTFCGTPEYL 316
Query: 475 APEYLSTGQSSEKTDVFGFGVLLLELITGQ 504
APE L D +G GV++ E++ G+
Sbjct: 317 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAA 435
+V Y+P G + LR + P H A+ +L + +I+RD+K
Sbjct: 111 MVMEYVPGGEMFSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHSLDLIYRDLKPE 163
Query: 436 NILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGV 495
N+L+D+ V DFG AK + R T + GT ++APE + + ++ D + GV
Sbjct: 164 NLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 219
Query: 496 LLLELITG 503
L+ E+ G
Sbjct: 220 LIYEMAAG 227
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAA 435
+V Y+P G + LR + P H A+ +L + +I+RD+K
Sbjct: 139 MVMEYVPGGEMFSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHSLDLIYRDLKPE 191
Query: 436 NILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGV 495
N+L+D+ V DFG AK + R T + GT ++APE + + ++ D + GV
Sbjct: 192 NLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 247
Query: 496 LLLELITG 503
L+ E+ G
Sbjct: 248 LIYEMAAG 255
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAA 435
+V Y+P G + LR + P H A+ +L + +I+RD+K
Sbjct: 119 MVMEYVPGGEMFSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHSLDLIYRDLKPE 171
Query: 436 NILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGV 495
N+L+D+ V DFG AK + R T + GT ++APE + + ++ D + GV
Sbjct: 172 NLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 496 LLLELITG 503
L+ E+ G
Sbjct: 228 LIYEMAAG 235
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAA 435
+V Y+P G + LR + P H A+ +L + +I+RD+K
Sbjct: 111 MVMEYVPGGEMFSHLRRIGRFXEP-------HARFYAAQIVLTFEYLHSLDLIYRDLKPE 163
Query: 436 NILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGV 495
N+L+D+ V DFG AK + R T + GT ++APE + + ++ D + GV
Sbjct: 164 NLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 219
Query: 496 LLLELITG 503
L+ E+ G
Sbjct: 220 LIYEMAAG 227
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAA 435
+V Y+P G + LR + P H A+ +L + +I+RD+K
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 436 NILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGV 495
N+L+D+ V DFG AK + R T + GT ++APE + + ++ D + GV
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 496 LLLELITG 503
L+ E+ G
Sbjct: 227 LIYEMAAG 234
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 106/234 (45%), Gaps = 26/234 (11%)
Query: 309 NILGQGGYGVVYKGCLPNRMVVAVKR-LKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGF 367
++G G +GVV++ L VA+K+ L+D F E++++ + H N++ L F
Sbjct: 46 KVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNR-----ELQIMRIVKHPNVVDLKAF 100
Query: 368 CMTPEERL------LVYPYMPNGSVADCLR---DTRQAKPPLDWNRRMHIALGTARGLLY 418
+ ++ LV Y+P +V R +Q P L M+ L R L Y
Sbjct: 101 FYSNGDKKDEVFLNLVLEYVPE-TVYRASRHYAKLKQTMPMLLIKLYMYQLL---RSLAY 156
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAV-VGDFGLAKLLDRRDSHVTTAVRGTVGHIAPE 477
+H I HRD+K N+LLD + + DFG AK+L + +V+ + + APE
Sbjct: 157 IHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXIC--SRYYRAPE 211
Query: 478 YL-STGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEER 530
+ + D++ G ++ EL+ GQ +G Q I+ + T E+
Sbjct: 212 LIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQ 265
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAA 435
+V Y+P G + LR + P H A+ +L + +I+RD+K
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFXEP-------HARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 436 NILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGV 495
N+L+D+ V DFG AK + R T + GT ++APE + + ++ D + GV
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 496 LLLELITG 503
L+ E+ G
Sbjct: 227 LIYEMAAG 234
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 11/128 (8%)
Query: 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAA 435
+V Y P G + LR + P H A+ +L + +I+RD+K
Sbjct: 119 MVLEYAPGGEMFSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHSLDLIYRDLKPE 171
Query: 436 NILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGV 495
N+L+D+ V DFG AK + R T + GT ++APE + + ++ D + GV
Sbjct: 172 NLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 496 LLLELITG 503
L+ E+ G
Sbjct: 228 LIYEMAAG 235
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 99/215 (46%), Gaps = 16/215 (7%)
Query: 294 SFRELQIATGNFSPKNILGQGGYGVVYKGCL--PNRMVVAVKRLKDPNFTGEV---QFQT 348
S R+ +I +G+G +G V++G P +AV N T + +F
Sbjct: 4 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 63
Query: 349 EVEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHI 408
E + H ++++L G +T ++ G + L+ + + LD +
Sbjct: 64 EALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYS---LDLASLILY 119
Query: 409 ALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVR 468
A + L YL + + +HRD+ A N+L+ + +GDFGL++ ++ DS A +
Sbjct: 120 AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME--DSTYYKASK 174
Query: 469 GT--VGHIAPEYLSTGQSSEKTDVFGFGVLLLELI 501
G + +APE ++ + + +DV+ FGV + E++
Sbjct: 175 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 209
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAA 435
+V Y+P G + LR + P H A+ +L + +I+RD+K
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 436 NILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGV 495
N+L+D+ V DFG AK + R T + GT ++APE + + ++ D + GV
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 496 LLLELITG 503
L+ E+ G
Sbjct: 227 LIYEMAAG 234
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAA 435
+V Y+P G + LR + P H A+ +L + +I+RD+K
Sbjct: 119 MVMEYVPGGEMFSHLRRIGRFXEP-------HARFYAAQIVLTFEYLHSLDLIYRDLKPE 171
Query: 436 NILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGV 495
N+L+D+ V DFG AK + R T + GT ++APE + + ++ D + GV
Sbjct: 172 NLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 496 LLLELITG 503
L+ E+ G
Sbjct: 228 LIYEMAAG 235
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 74/166 (44%), Gaps = 23/166 (13%)
Query: 409 ALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTA-V 467
+ A+G+ +L + K IHRD+ A NILL E + DFGLA+ + + +V
Sbjct: 199 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 255
Query: 468 RGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILD--CVRT 525
R + +APE + + ++DV+ FGVLL E+ + G+ +D R
Sbjct: 256 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRR 308
Query: 526 LHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
L E R+ + D T E M Q L C P+ RP S
Sbjct: 309 LKEGTRMR---------APDYTTPE-MYQTMLDCWHGEPSQRPTFS 344
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAA 435
+V Y+P G + LR + P H A+ +L + +I+RD+K
Sbjct: 119 MVMEYVPGGEMFSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHSLDLIYRDLKPE 171
Query: 436 NILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGV 495
N+L+D+ V DFG AK + R T + GT ++APE + + ++ D + GV
Sbjct: 172 NLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 496 LLLELITG 503
L+ E+ G
Sbjct: 228 LIYEMAAG 235
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 101/217 (46%), Gaps = 20/217 (9%)
Query: 294 SFRELQIATGNFSPKNILGQGGYGVVYKGCLPN----RMVVAVKRLKDPNFTGEV---QF 346
S R+ +I +G+G +G V++G + M VA+K K N T + +F
Sbjct: 381 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCK--NCTSDSVREKF 438
Query: 347 QTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRM 406
E + H ++++L G +T ++ G + L+ K LD +
Sbjct: 439 LQEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQ---VRKFSLDLASLI 494
Query: 407 HIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTA 466
A + L YL + + +HRD+ A N+L+ + +GDFGL++ ++ DS A
Sbjct: 495 LYAYQLSTALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYME--DSTYYKA 549
Query: 467 VRGT--VGHIAPEYLSTGQSSEKTDVFGFGVLLLELI 501
+G + +APE ++ + + +DV+ FGV + E++
Sbjct: 550 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAA 435
+V Y+P G + LR + P H A+ +L + +I+RD+K
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFXEP-------HARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 436 NILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGV 495
N+L+D+ V DFG AK + R T + GT ++APE + + ++ D + GV
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 496 LLLELITG 503
L+ E+ G
Sbjct: 227 LIYEMAAG 234
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAA 435
+V Y+P G + LR + P H A+ +L + +I+RD+K
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 436 NILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGV 495
N+L+D+ V DFG AK + R T + GT ++APE + + ++ D + GV
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 496 LLLELITG 503
L+ E+ G
Sbjct: 227 LIYEMAAG 234
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 99/215 (46%), Gaps = 16/215 (7%)
Query: 294 SFRELQIATGNFSPKNILGQGGYGVVYKGCL--PNRMVVAVKRLKDPNFTGEV---QFQT 348
S R+ +I +G+G +G V++G P +AV N T + +F
Sbjct: 3 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 62
Query: 349 EVEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHI 408
E + H ++++L G +T ++ G + L+ + + LD +
Sbjct: 63 EALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYS---LDLASLILY 118
Query: 409 ALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVR 468
A + L YL + + +HRD+ A N+L+ + +GDFGL++ ++ DS A +
Sbjct: 119 AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME--DSTYYKASK 173
Query: 469 GT--VGHIAPEYLSTGQSSEKTDVFGFGVLLLELI 501
G + +APE ++ + + +DV+ FGV + E++
Sbjct: 174 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 208
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAA 435
+V Y+P G + LR + P H A+ +L + +I+RD+K
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 436 NILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGV 495
N+L+D+ V DFG AK + R T + GT ++APE + + ++ D + GV
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 496 LLLELITG 503
L+ E+ G
Sbjct: 227 LIYEMAAG 234
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAA 435
+V Y+P G + LR + P H A+ +L + +I+RD+K
Sbjct: 119 MVMEYVPGGEMFSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHSLDLIYRDLKPE 171
Query: 436 NILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGV 495
N+L+D+ V DFG AK + R T + GT ++APE + + ++ D + GV
Sbjct: 172 NLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 496 LLLELITG 503
L+ E+ G
Sbjct: 228 LIYEMAAG 235
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAA 435
+V Y+P G + LR + P H A+ +L + +I+RD+K
Sbjct: 119 MVMEYVPGGEMFSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHSLDLIYRDLKPE 171
Query: 436 NILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGV 495
N+L+D+ V DFG AK + R T + GT ++APE + + ++ D + GV
Sbjct: 172 NLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 496 LLLELITG 503
L+ E+ G
Sbjct: 228 LIYEMAAG 235
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 101/217 (46%), Gaps = 20/217 (9%)
Query: 294 SFRELQIATGNFSPKNILGQGGYGVVYKGCLPN----RMVVAVKRLKDPNFTGEV---QF 346
S R+ +I +G+G +G V++G + M VA+K K N T + +F
Sbjct: 381 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCK--NCTSDSVREKF 438
Query: 347 QTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRM 406
E + H ++++L G +T ++ G + L+ K LD +
Sbjct: 439 LQEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQ---VRKFSLDLASLI 494
Query: 407 HIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTA 466
A + L YL + + +HRD+ A N+L+ + +GDFGL++ ++ DS A
Sbjct: 495 LYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME--DSTYYKA 549
Query: 467 VRGT--VGHIAPEYLSTGQSSEKTDVFGFGVLLLELI 501
+G + +APE ++ + + +DV+ FGV + E++
Sbjct: 550 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 74/166 (44%), Gaps = 23/166 (13%)
Query: 409 ALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTA-V 467
+ A+G+ +L + K IHRD+ A NILL E + DFGLA+ + + +V
Sbjct: 197 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 253
Query: 468 RGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILD--CVRT 525
R + +APE + + ++DV+ FGVLL E+ + G+ +D R
Sbjct: 254 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRR 306
Query: 526 LHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
L E R+ + D T E M Q L C P+ RP S
Sbjct: 307 LKEGTRMR---------APDYTTPE-MYQTMLDCWHGEPSQRPTFS 342
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAA 435
+V Y+P G + LR + P H A+ +L + +I+RD+K
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 436 NILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGV 495
N+L+D+ V DFG AK + R T + GT ++APE + + ++ D + GV
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 496 LLLELITG 503
L+ E+ G
Sbjct: 227 LIYEMAAG 234
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 74/166 (44%), Gaps = 23/166 (13%)
Query: 409 ALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTA-V 467
+ A+G+ +L + K IHRD+ A NILL E + DFGLA+ + + +V
Sbjct: 206 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 262
Query: 468 RGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILD--CVRT 525
R + +APE + + ++DV+ FGVLL E+ + G+ +D R
Sbjct: 263 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRR 315
Query: 526 LHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
L E R+ + D T E M Q L C P+ RP S
Sbjct: 316 LKEGTRMR---------APDYTTPE-MYQTMLDCWHGEPSQRPTFS 351
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 74/166 (44%), Gaps = 23/166 (13%)
Query: 409 ALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTA-V 467
+ A+G+ +L + K IHRD+ A NILL E + DFGLA+ + + +V
Sbjct: 204 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 260
Query: 468 RGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILD--CVRT 525
R + +APE + + ++DV+ FGVLL E+ + G+ +D R
Sbjct: 261 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRR 313
Query: 526 LHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMS 571
L E R+ + D T E M Q L C P+ RP S
Sbjct: 314 LKEGTRM---------RAPDYTTPE-MYQTMLDCWHGEPSQRPTFS 349
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAA 435
+V Y+P G + LR + P H A+ +L + +I+RD+K
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 436 NILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGV 495
N+L+D+ V DFG AK + R T + GT ++APE + + ++ D + GV
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 496 LLLELITG 503
L+ E+ G
Sbjct: 227 LIYEMAAG 234
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 20/202 (9%)
Query: 310 ILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQT-----EVEMIGLALHRNLLRL 364
+LG+G +G V K +R+ +K N T EVE++ H N+++L
Sbjct: 29 MLGKGSFGEVLK--CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL 86
Query: 365 YGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCN 424
+ +V G + D + R+ D R I G+ Y+H+
Sbjct: 87 FEILEDSSSFYIVGELYTGGELFDEII-KRKRFSEHDAAR---IIKQVFSGITYMHKH-- 140
Query: 425 PKIIHRDVKAANILL---DESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLST 481
I+HRD+K NILL ++ + + DFGL+ ++++ + + GT +IAPE L
Sbjct: 141 -NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF-QQNTKMKDRI-GTAYYIAPEVLR- 196
Query: 482 GQSSEKTDVFGFGVLLLELITG 503
G EK DV+ GV+L L++G
Sbjct: 197 GTYDEKCDVWSAGVILYILLSG 218
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 20/202 (9%)
Query: 310 ILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQT-----EVEMIGLALHRNLLRL 364
+LG+G +G V K +R+ +K N T EVE++ H N+++L
Sbjct: 29 MLGKGSFGEVLK--CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL 86
Query: 365 YGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCN 424
+ +V G + D + R+ D R I G+ Y+H+
Sbjct: 87 FEILEDSSSFYIVGELYTGGELFDEII-KRKRFSEHDAAR---IIKQVFSGITYMHKH-- 140
Query: 425 PKIIHRDVKAANILL---DESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLST 481
I+HRD+K NILL ++ + + DFGL+ ++++ + + GT +IAPE L
Sbjct: 141 -NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF-QQNTKMKDRI-GTAYYIAPEVLR- 196
Query: 482 GQSSEKTDVFGFGVLLLELITG 503
G EK DV+ GV+L L++G
Sbjct: 197 GTYDEKCDVWSAGVILYILLSG 218
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAA 435
+V Y P G + LR + P H A+ +L + +I+RD+K
Sbjct: 118 MVMEYAPGGEMFSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 436 NILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGV 495
N+++D+ V DFGLAK + R T + GT ++APE + + ++ D + GV
Sbjct: 171 NLMIDQQGYIKVTDFGLAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 496 LLLELITG 503
L+ E+ G
Sbjct: 227 LIYEMAAG 234
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAA 435
+V Y P G + LR + P H A+ +L + +I+RD+K
Sbjct: 118 MVMEYAPGGEMFSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 436 NILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGV 495
N+++D+ V DFGLAK + R T + GT ++APE + + ++ D + GV
Sbjct: 171 NLMIDQQGYIQVTDFGLAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 496 LLLELITG 503
L+ E+ G
Sbjct: 227 LIYEMAAG 234
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 64/146 (43%), Gaps = 8/146 (5%)
Query: 358 HRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLL 417
H L+ L+ T ++ V Y+ G + L+ R P R A A L
Sbjct: 98 HPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEP----RARFYAAEIASALG 153
Query: 418 YLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPE 477
YLH I++RD+K NILLD V+ DFGL K +S T+ GT ++APE
Sbjct: 154 YLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNS-TTSTFCGTPEYLAPE 209
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITG 503
L D + G +L E++ G
Sbjct: 210 VLHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 26/226 (11%)
Query: 310 ILGQGGYGVVYK-----GCLPNRMVVAVKRLKDP----NFTGEVQFQTEVEMIGLALHRN 360
+LG+GGYG V++ G + + A+K LK N + E ++ H
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGK-IFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 361 LLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLD----WNRRMHIALGTARGL 416
++ L T + L+ Y+ G + ++ R+ D + + +ALG
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGEL--FMQLEREGIFMEDTACFYLAEISMALG----- 135
Query: 417 LYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAP 476
+LH++ II+RD+K NI+L+ + DFGL K D VT GT+ ++AP
Sbjct: 136 -HLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKE-SIHDGTVTHTFCGTIEYMAP 190
Query: 477 EYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDC 522
E L + D + G L+ +++TG N + IL C
Sbjct: 191 EILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKC 236
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 20/207 (9%)
Query: 304 NFSPKNILGQGGYGVV---YKGCLPNRMVVAVKRLKDP--NFTGEVQFQTEVEMIGLALH 358
N P +G G G+V Y L VA+K+L P N T + E+ ++ + H
Sbjct: 28 NLKP---IGSGAQGIVVAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 359 RNLLRLYGFCMTPEERLLVYP--YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGL 416
+N++ L TP++ L + Y+ + L Q + LD R ++ G+
Sbjct: 83 KNIIGLLN-VFTPQKSLEEFQDVYIVMELMDANLSQVIQME--LDHERMSYLLYQMLVGI 139
Query: 417 LYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAP 476
+LH IIHRD+K +NI++ + DFGLA+ S + T T + AP
Sbjct: 140 KHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAG--TSFMMTPYVVTRYYRAP 194
Query: 477 EYLSTGQSSEKTDVFGFGVLLLELITG 503
E + E D++ GV++ E+I G
Sbjct: 195 EVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 20/207 (9%)
Query: 304 NFSPKNILGQGGYGVV---YKGCLPNRMVVAVKRLKDP--NFTGEVQFQTEVEMIGLALH 358
N P +G G G+V Y L VA+K+L P N T + E+ ++ + H
Sbjct: 28 NLKP---IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 359 RNLLRLYGFCMTPEERLLVYP--YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGL 416
+N++ L TP++ L + Y+ + L Q + LD R ++ G+
Sbjct: 83 KNIIGLLN-VFTPQKSLEEFQDVYIVMELMDANLSQVIQME--LDHERMSYLLYQMLVGI 139
Query: 417 LYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAP 476
+LH IIHRD+K +NI++ + DFGLA+ S + T T + AP
Sbjct: 140 KHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAG--TSFMMTPYVVTRYYRAP 194
Query: 477 EYLSTGQSSEKTDVFGFGVLLLELITG 503
E + E D++ GV++ E+I G
Sbjct: 195 EVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 60/111 (54%), Gaps = 7/111 (6%)
Query: 414 RGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL---DRRDSHVTTAVRGT 470
RGL Y+H + ++IHRD+K +N+L++E+ E +GDFG+A+ L + T T
Sbjct: 170 RGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 226
Query: 471 VGHIAPE-YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMIL 520
+ APE LS + ++ D++ G + E++ ++ N Q +I+
Sbjct: 227 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIM 277
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHI 474
L YLH + N +++RD+K N++LD+ + DFGL K +D GT ++
Sbjct: 122 ALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFCGTPEYL 178
Query: 475 APEYLSTGQSSEKTDVFGFGVLLLELITGQ 504
APE L D +G GV++ E++ G+
Sbjct: 179 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 414 RGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV--TTAVRGTV 471
RGL Y+H + ++HRD+K +N+L++ + + + DFGLA++ D H T T
Sbjct: 155 RGLKYIH---SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATR 211
Query: 472 GHIAPEYLSTGQSSEKT-DVFGFGVLLLELITGQ 504
+ APE + + K+ D++ G +L E+++ +
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHI 474
L YLH + N +++RD+K N++LD+ + DFGL K +D GT ++
Sbjct: 121 ALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFCGTPEYL 177
Query: 475 APEYLSTGQSSEKTDVFGFGVLLLELITGQ 504
APE L D +G GV++ E++ G+
Sbjct: 178 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 26/226 (11%)
Query: 310 ILGQGGYGVVYK-----GCLPNRMVVAVKRLKDP----NFTGEVQFQTEVEMIGLALHRN 360
+LG+GGYG V++ G + + A+K LK N + E ++ H
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGK-IFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 361 LLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLD----WNRRMHIALGTARGL 416
++ L T + L+ Y+ G + ++ R+ D + + +ALG
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGEL--FMQLEREGIFMEDTACFYLAEISMALG----- 135
Query: 417 LYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAP 476
+LH++ II+RD+K NI+L+ + DFGL K D VT GT+ ++AP
Sbjct: 136 -HLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKE-SIHDGTVTHXFCGTIEYMAP 190
Query: 477 EYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDC 522
E L + D + G L+ +++TG N + IL C
Sbjct: 191 EILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKC 236
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 100/228 (43%), Gaps = 18/228 (7%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDP--NFTGEVQFQTEVEMIGLALHRN 360
N SP +G G YG V + VAVK+L P + + E+ ++ H N
Sbjct: 26 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 361 LLRLYGFCMTPEERLLVYP--YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++ L TP L + Y+ + L + +++ D + + RGL Y
Sbjct: 83 VIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTD-DHVQFLIYQILRGLKY 140
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPE- 477
+H + IIHRD+K +N+ ++E E + DFGL + D T T + APE
Sbjct: 141 IH---SADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDE----MTGYVATRWYRAPEI 193
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
L+ ++ D++ G ++ EL+TG+ + Q +IL V T
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHI 474
L YLH + N +++RD+K N++LD+ + DFGL K +D GT ++
Sbjct: 120 ALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFCGTPEYL 176
Query: 475 APEYLSTGQSSEKTDVFGFGVLLLELITGQ 504
APE L D +G GV++ E++ G+
Sbjct: 177 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Query: 414 RGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGH 473
RGL Y+H + IIHRD+K +N+ ++E E + D+GLA+ D T T +
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDE----MTGYVATRWY 188
Query: 474 IAPE-YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
APE L+ ++ D++ G ++ EL+TG+ + Q +IL V T
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 101/231 (43%), Gaps = 24/231 (10%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDP--NFTGEVQFQTEVEMIGLALHRN 360
N SP +G G YG V + VAVK+L P + + E+ ++ H N
Sbjct: 49 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 105
Query: 361 LLRLYGFCMTPEERLLVYP--YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++ L TP L + Y+ + L + + + D + + RGL Y
Sbjct: 106 VIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKY 163
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVG---HIA 475
+H + IIHRD+K +N+ ++E E + DFGLA+ H + G V + A
Sbjct: 164 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMXGYVATRWYRA 213
Query: 476 PE-YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
PE L+ ++ D++ G ++ EL+TG+ + Q +IL V T
Sbjct: 214 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 264
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Query: 414 RGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGH 473
RGL Y+H + IIHRD+K +N+ ++E E + DFGLA+ D T T +
Sbjct: 165 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWY 217
Query: 474 IAPEYLSTGQSSEKT-DVFGFGVLLLELITGQ 504
APE + T D++ G ++ EL+TG+
Sbjct: 218 RAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 101/231 (43%), Gaps = 37/231 (16%)
Query: 311 LGQGGYGVVYKGCLPNRMV---VAVKRLKDPN----FTGEVQFQTEVEMIGLALHRNLLR 363
+G G YGVV R+ VA+K++ PN T + E++++ H N++
Sbjct: 62 IGNGAYGVVSSAR--RRLTGQQVAIKKI--PNAFDVVTNAKRTLRELKILKHFKHDNIIA 117
Query: 364 LYGFCMTPEERLLVYPYMPNGSVADC----------LRDTRQAKPPLDWNRRMHIALGTA 413
+ + ++ P +P G L + PL +
Sbjct: 118 I---------KDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLL 168
Query: 414 RGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL---DRRDSHVTTAVRGT 470
RGL Y+H + ++IHRD+K +N+L++E+ E +GDFG+A+ L + T T
Sbjct: 169 RGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 225
Query: 471 VGHIAPE-YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMIL 520
+ APE LS + ++ D++ G + E++ ++ N Q +I+
Sbjct: 226 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIM 276
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 59/116 (50%), Gaps = 14/116 (12%)
Query: 414 RGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVG- 472
RGL Y+H + IIHRD+K +N+ ++E E + DFGLA+ H + G V
Sbjct: 156 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMXGXVAT 205
Query: 473 --HIAPE-YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
+ APE L+ ++ D++ G ++ EL+TG+ + Q +IL V T
Sbjct: 206 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 261
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 93/203 (45%), Gaps = 17/203 (8%)
Query: 311 LGQGGYGVV---YKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLAL---HRNLLRL 364
+G+G YG+V Y N++ VA+K++ F + Q + I + L H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNL--NKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHENIIGI 90
Query: 365 YGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCN 424
P + Y+ + L + + L + + RGL Y+H +
Sbjct: 91 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH---S 146
Query: 425 PKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV--TTAVRGTVGHIAPEYLSTG 482
++HRD+K +N+LL+ + + + DFGLA++ D H T + APE +
Sbjct: 147 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNS 206
Query: 483 QSSEKT-DVFGFGVLLLELITGQ 504
+ K+ D++ G +L E+++ +
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 93/203 (45%), Gaps = 17/203 (8%)
Query: 311 LGQGGYGVV---YKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLAL---HRNLLRL 364
+G+G YG+V Y N++ VA+K++ F + Q + I + L H N++ +
Sbjct: 36 IGEGAYGMVCSAYDNL--NKVRVAIKKISP--FEHQTYCQRTLREIKILLRFRHENIIGI 91
Query: 365 YGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCN 424
P + Y+ + L + + L + + RGL Y+H +
Sbjct: 92 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH---S 147
Query: 425 PKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHV--TTAVRGTVGHIAPEYLSTG 482
++HRD+K +N+LL+ + + + DFGLA++ D H T + APE +
Sbjct: 148 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNS 207
Query: 483 QSSEKT-DVFGFGVLLLELITGQ 504
+ K+ D++ G +L E+++ +
Sbjct: 208 KGYTKSIDIWSVGCILAEMLSNR 230
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 8/113 (7%)
Query: 414 RGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGH 473
RGL Y+H + IIHRD+K +N+ ++E E + DFGLA+ D T +
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MAGFVATRWY 188
Query: 474 IAPE-YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
APE L+ ++ D++ G ++ EL+TG+ + Q +IL V T
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 8/113 (7%)
Query: 414 RGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGH 473
RGL Y+H + IIHRD+K +N+ ++E E + DFGLA+ D T +
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MAGFVATRWY 188
Query: 474 IAPE-YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
APE L+ ++ D++ G ++ EL+TG+ + Q +IL V T
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 8/113 (7%)
Query: 414 RGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGH 473
RGL Y+H + IIHRD+K +N+ ++E E + DFGLA+ D T +
Sbjct: 132 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MAGFVATRWY 184
Query: 474 IAPE-YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
APE L+ ++ D++ G ++ EL+TG+ + Q +IL V T
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 237
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 98/222 (44%), Gaps = 38/222 (17%)
Query: 311 LGQGGYGVVYKGCLPNRM--VVAVKRLKDP---NFTGEVQFQTEVEMIGLALHRNLLRLY 365
LG+G YG+V+K + R VVAVK++ D + + F+ + + L+ H N++ L
Sbjct: 17 LGKGAYGIVWKS-IDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLL 75
Query: 366 GFCMTPEER--LLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQC 423
+R LV+ YM A + L+ + ++ + + YLH
Sbjct: 76 NVLRADNDRDVYLVFDYMETDLHAVIRANI------LEPVHKQYVVYQLIKVIKYLHSGG 129
Query: 424 NPKIIHRDVKAANILLDESFEAVVGDFGLAKLL--DRR------------------DSHV 463
++HRD+K +NILL+ V DFGL++ RR D +
Sbjct: 130 ---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPI 186
Query: 464 TTAVRGTVGHIAPEY-LSTGQSSEKTDVFGFGVLLLELITGQ 504
T T + APE L + + ++ D++ G +L E++ G+
Sbjct: 187 LTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 11/128 (8%)
Query: 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAA 435
+V Y P G + LR + P H A+ +L + +I+RD+K
Sbjct: 119 MVMEYAPGGEMFSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHSLDLIYRDLKPE 171
Query: 436 NILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGV 495
N+++D+ V DFG AK + R T + GT ++APE + + ++ D + GV
Sbjct: 172 NLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 496 LLLELITG 503
L+ E+ G
Sbjct: 228 LIYEMAAG 235
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 11/128 (8%)
Query: 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAA 435
+V Y P G + LR + P H A+ +L + +I+RD+K
Sbjct: 119 MVMEYAPGGEMFSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHSLDLIYRDLKPE 171
Query: 436 NILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGV 495
N+++D+ V DFG AK + R T + GT ++APE + + ++ D + GV
Sbjct: 172 NLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 496 LLLELITG 503
L+ E+ G
Sbjct: 228 LIYEMAAG 235
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 11/128 (8%)
Query: 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAA 435
+V Y P G + LR + P H A+ +L + +I+RD+K
Sbjct: 118 MVMEYAPGGEMFSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 436 NILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGV 495
N+++D+ V DFG AK + R T + GT ++APE + + ++ D + GV
Sbjct: 171 NLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 496 LLLELITG 503
L+ E+ G
Sbjct: 227 LIYEMAAG 234
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 11/128 (8%)
Query: 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAA 435
+V Y P G + LR + P H A+ +L + +I+RD+K
Sbjct: 119 MVMEYAPGGEMFSHLRRIGRFXEP-------HARFYAAQIVLTFEYLHSLDLIYRDLKPE 171
Query: 436 NILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGV 495
N+++D+ V DFG AK + R T + GT ++APE + + ++ D + GV
Sbjct: 172 NLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 496 LLLELITG 503
L+ E+ G
Sbjct: 228 LIYEMAAG 235
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 11/128 (8%)
Query: 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAA 435
+V Y P G + LR + P H A+ +L + +I+RD+K
Sbjct: 118 MVMEYAPGGEMFSHLRRIGRFXEP-------HARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 436 NILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGV 495
N+++D+ V DFG AK + R T + GT ++APE + + ++ D + GV
Sbjct: 171 NLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 496 LLLELITG 503
L+ E+ G
Sbjct: 227 LIYEMAAG 234
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 11/128 (8%)
Query: 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAA 435
+V Y P G + LR + P H A+ +L + +I+RD+K
Sbjct: 119 MVMEYAPGGEMFSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHSLDLIYRDLKPE 171
Query: 436 NILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGV 495
N+++D+ V DFG AK + R T + GT ++APE + + ++ D + GV
Sbjct: 172 NLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 496 LLLELITG 503
L+ E+ G
Sbjct: 228 LIYEMAAG 235
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 11/128 (8%)
Query: 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAA 435
+V Y P G + LR + P H A+ +L + +I+RD+K
Sbjct: 118 MVMEYAPGGEMFSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 436 NILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGV 495
N+++D+ V DFG AK + R T + GT ++APE + + ++ D + GV
Sbjct: 171 NLMIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 496 LLLELITG 503
L+ E+ G
Sbjct: 227 LIYEMAAG 234
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 23/209 (11%)
Query: 309 NILGQGGYGVVYKGCLPNRMV---VAVKRLKDPNFTGEVQFQTE-----VEMIGLALHRN 360
++G+G + VV + C+ NR AVK + FT TE + + H +
Sbjct: 30 EVIGKGAFSVVRR-CI-NRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPH 87
Query: 361 LLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRM--HIALGTARGLLY 418
++ L + +V+ +M + C ++A ++ + H L Y
Sbjct: 88 IVELLETYSSDGMLYMVFEFMDGADL--CFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 419 LHEQCNPKIIHRDVKAANILL---DESFEAVVGDFGLAKLLDRRDSHVTTAVR-GTVGHI 474
H+ IIHRDVK N+LL + S +GDFG+A L +S + R GT +
Sbjct: 146 CHDN---NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLG--ESGLVAGGRVGTPHFM 200
Query: 475 APEYLSTGQSSEKTDVFGFGVLLLELITG 503
APE + + DV+G GV+L L++G
Sbjct: 201 APEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 94/198 (47%), Gaps = 16/198 (8%)
Query: 311 LGQGGYGVVYKGCL--PNRMVVAVKRLKDPNFTGEV---QFQTEVEMIGLALHRNLLRLY 365
+G+G +G V++G P +AV N T + +F E + H ++++L
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 366 GFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNP 425
G +T ++ G + L+ + + LD + A + L YL +
Sbjct: 75 GV-ITENPVWIIMELCTLGELRSFLQVRKYS---LDLASLILYAYQLSTALAYLESK--- 127
Query: 426 KIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGT--VGHIAPEYLSTGQ 483
+ +HRD+ A N+L+ + +GDFGL++ ++ DS A +G + +APE ++ +
Sbjct: 128 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME--DSTYYKASKGKLPIKWMAPESINFRR 185
Query: 484 SSEKTDVFGFGVLLLELI 501
+ +DV+ FGV + E++
Sbjct: 186 FTSASDVWMFGVCMWEIL 203
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 11/128 (8%)
Query: 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAA 435
+V Y+ G + LR + P H A+ +L + +I+RD+K
Sbjct: 105 MVMEYVAGGEMFSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHSLDLIYRDLKPE 157
Query: 436 NILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGV 495
N+L+DE V DFG AK + R T + GT ++APE + + ++ D + GV
Sbjct: 158 NLLIDEQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 213
Query: 496 LLLELITG 503
L+ E+ G
Sbjct: 214 LIYEMAAG 221
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 11/128 (8%)
Query: 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAA 435
+V Y+ G + LR + P H A+ +L + +I+RD+K
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 436 NILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGV 495
N+L+D+ V DFG AK + R T + GT ++APE + + ++ D + GV
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKGR----TWXLXGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 496 LLLELITG 503
L+ E+ G
Sbjct: 227 LIYEMAAG 234
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 97/234 (41%), Gaps = 41/234 (17%)
Query: 308 KNILGQGGYGVVYKGC-LPNRMVVAVKRL------KDPNFTGEVQFQTEVEMIGLALHRN 360
+ +L +GG+ VY+ + + A+KRL K+ EV F M L+ H N
Sbjct: 33 RRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCF-----MKKLSGHPN 87
Query: 361 LLRLYGFCM----------TPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIAL 410
+++ FC T + L+ + G + + L+ +++ PL + + I
Sbjct: 88 IVQ---FCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKM-ESRGPLSCDTVLKIFY 143
Query: 411 GTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVR-- 468
T R + ++H Q P IIHRD+K N+LL + DFG A + + +A R
Sbjct: 144 QTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRA 202
Query: 469 ---------GTVGHIAPEYL---STGQSSEKTDVFGFGVLLLELITGQKALDVG 510
T + PE + S EK D++ G +L L Q + G
Sbjct: 203 LVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDG 256
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 91/202 (45%), Gaps = 22/202 (10%)
Query: 311 LGQGGYGVVYKGCLPNR--MVVAVKRLKDPNFTGEVQFQTEVEMIGLAL---HRNLLRLY 365
LG+G + + K C+ + AVK + + ++ T+ E+ L L H N+++L+
Sbjct: 19 LGEGSFSICRK-CVHKKSNQAFAVKII-----SKRMEANTQKEITALKLCEGHPNIVKLH 72
Query: 366 GFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNP 425
LV + G + + ++ + +I + ++H+
Sbjct: 73 EVFHDQLHTFLVMELLNGGELFERIKKKKH----FSETEASYIMRKLVSAVSHMHD---V 125
Query: 426 KIIHRDVKAANILL---DESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTG 482
++HRD+K N+L +++ E + DFG A+L + + T T+ + APE L+
Sbjct: 126 GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPC-FTLHYAAPELLNQN 184
Query: 483 QSSEKTDVFGFGVLLLELITGQ 504
E D++ GV+L +++GQ
Sbjct: 185 GYDESCDLWSLGVILYTMLSGQ 206
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 11/128 (8%)
Query: 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAA 435
+V Y+ G + LR + P H A+ +L + +I+RD+K
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 436 NILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGV 495
N+L+D+ V DFG AK + R T + GT ++APE + + ++ D + GV
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKGR----TWXLAGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 496 LLLELITG 503
L+ E+ G
Sbjct: 227 LIYEMAAG 234
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 8/113 (7%)
Query: 414 RGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGH 473
RGL Y+H + IIHRD+K +N+ ++E E + DF LA+ D T T +
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDE----MTGYVATRWY 188
Query: 474 IAPE-YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
APE L+ ++ D++ G ++ EL+TG+ + Q +IL V T
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 20/207 (9%)
Query: 304 NFSPKNILGQGGYGVV---YKGCLPNRMVVAVKRLKDP--NFTGEVQFQTEVEMIGLALH 358
N P +G G G+V Y L VA+K+L P N T + E+ ++ + H
Sbjct: 28 NLKP---IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 359 RNLLRLYGFCMTPEERLLVYP--YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGL 416
+N++ L TP++ L + Y+ + L Q + LD R ++ G+
Sbjct: 83 KNIIGLLN-VFTPQKSLEEFQDVYIVMELMDANLSQVIQME--LDHERMSYLLYQMLVGI 139
Query: 417 LYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAP 476
+LH + IIHRD+K +NI++ + DFGLA+ S + T T + AP
Sbjct: 140 KHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAG--TSFMMTPYVVTRYYRAP 194
Query: 477 EYLSTGQSSEKTDVFGFGVLLLELITG 503
E + E D++ G ++ E+I G
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 99/228 (43%), Gaps = 18/228 (7%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDP--NFTGEVQFQTEVEMIGLALHRN 360
N SP +G G YG V + VAVK+L P + + E+ ++ H N
Sbjct: 26 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 361 LLRLYGFCMTPEERLLVYP--YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++ L TP L + Y+ + L + + + D + + RGL Y
Sbjct: 83 VIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKY 140
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPE- 477
+H + IIHRD+K +N+ ++E E + FGLA+ D T T + APE
Sbjct: 141 IH---SADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDE----MTGYVATRWYRAPEI 193
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
L+ ++ D++ G ++ EL+TG+ + Q +IL V T
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 100/233 (42%), Gaps = 15/233 (6%)
Query: 309 NILGQGGYGVVYKGCLPN-RMVVAVKRLK-----DPNFTGEVQFQTEVEMIGLALHRNLL 362
+ LG+G + VYK N +VA+K++K + E++++ H N++
Sbjct: 16 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 75
Query: 363 RLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQ 422
L LV+ +M + ++D P M L T +GL YLH+
Sbjct: 76 GLLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAYM---LMTLQGLEYLHQH 131
Query: 423 CNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTG 482
I+HRD+K N+LLDE+ + DFGLAK + V T + APE L
Sbjct: 132 W---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV-TRWYRAPELLFGA 187
Query: 483 Q-SSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDV 534
+ D++ G +L EL+ L + Q I + + T EE+ D+
Sbjct: 188 RMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDM 240
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 20/207 (9%)
Query: 304 NFSPKNILGQGGYGVV---YKGCLPNRMVVAVKRLKDP--NFTGEVQFQTEVEMIGLALH 358
N P +G G G+V Y L VA+K+L P N T + E+ ++ + H
Sbjct: 28 NLKP---IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 359 RNLLRLYGFCMTPEERLLVYP--YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGL 416
+N++ L TP++ L + Y+ + L Q + LD R ++ G+
Sbjct: 83 KNIIGLLN-VFTPQKSLEEFQDVYIVMELMDANLSQVIQME--LDHERMSYLLYQMLCGI 139
Query: 417 LYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAP 476
+LH + IIHRD+K +NI++ + DFGLA+ S + T T + AP
Sbjct: 140 KHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAG--TSFMMTPYVVTRYYRAP 194
Query: 477 EYLSTGQSSEKTDVFGFGVLLLELITG 503
E + E D++ G ++ E+I G
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 99/228 (43%), Gaps = 18/228 (7%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDP--NFTGEVQFQTEVEMIGLALHRN 360
N SP +G G YG V + VAVK+L P + + E+ ++ H N
Sbjct: 26 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 361 LLRLYGFCMTPEERLLVYP--YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++ L TP L + Y+ + L + + + D + + RGL Y
Sbjct: 83 VIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKY 140
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPE- 477
+H + IIHRD+K +N+ ++E E + D GLA+ D T T + APE
Sbjct: 141 IH---SADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDE----MTGYVATRWYRAPEI 193
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
L+ ++ D++ G ++ EL+TG+ + Q +IL V T
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 114/264 (43%), Gaps = 50/264 (18%)
Query: 308 KNILGQGGYG-VVYKGCLPNRMVVAVKRLKDPNFTG----EVQFQTEVEMIGLALHRNLL 362
+ ILG G G VV++G R VAVKR+ +F E++ TE + H N++
Sbjct: 38 EKILGYGSSGTVVFQGSFQGR-PVAVKRML-IDFCDIALMEIKLLTESDD-----HPNVI 90
Query: 363 RLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMH-----IAL--GTARG 415
R Y C +R L Y+ L+D ++K D N ++ I+L A G
Sbjct: 91 RYY--CSETTDRFL---YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASG 145
Query: 416 LLYLHEQCNPKIIHRDVKAANILLD-------------ESFEAVVGDFGLAKLLDRRDSH 462
+ +LH + KIIHRD+K NIL+ E+ ++ DFGL K LD
Sbjct: 146 VAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXX 202
Query: 463 VTTAVR---GTVGHIAPEYLSTGQSSEKT---DVFGFGVLLLELITGQKALDVGNGQVQK 516
+ GT G APE L T D+F G + +++ K G+ ++
Sbjct: 203 FRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKH-PFGDKYSRE 261
Query: 517 GMILDCVRTLHEERRLDVLIDRDL 540
I+ + +L E + L DR L
Sbjct: 262 SNIIRGIFSLDE---MKCLHDRSL 282
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 113/264 (42%), Gaps = 50/264 (18%)
Query: 308 KNILGQGGYG-VVYKGCLPNRMVVAVKRLKDPNFTG----EVQFQTEVEMIGLALHRNLL 362
+ ILG G G VV++G R VAVKR+ +F E++ TE + H N++
Sbjct: 38 EKILGYGSSGTVVFQGSFQGR-PVAVKRML-IDFCDIALMEIKLLTESDD-----HPNVI 90
Query: 363 RLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMH-----IAL--GTARG 415
R Y C +R L Y+ L+D ++K D N ++ I+L A G
Sbjct: 91 RYY--CSETTDRFL---YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASG 145
Query: 416 LLYLHEQCNPKIIHRDVKAANILLD-------------ESFEAVVGDFGLAKLLDRRDSH 462
+ +LH KIIHRD+K NIL+ E+ ++ DFGL K LD
Sbjct: 146 VAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXX 202
Query: 463 VTTAVR---GTVGHIAPEYLSTGQSSEKT---DVFGFGVLLLELITGQKALDVGNGQVQK 516
+ GT G APE L T D+F G + +++ K G+ ++
Sbjct: 203 FRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKH-PFGDKYSRE 261
Query: 517 GMILDCVRTLHEERRLDVLIDRDL 540
I+ + +L E + L DR L
Sbjct: 262 SNIIRGIFSLDE---MKCLHDRSL 282
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 86/208 (41%), Gaps = 14/208 (6%)
Query: 302 TGNFSPKNILGQGGYGVV---YKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALH 358
T + +G+G + VV K C + + K + + + E + L H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 359 RNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
N++RL+ LV+ + G + + + R+ D + H +L+
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGELFEDIV-AREYYSEADAS---HCIQQILEAVLH 118
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAV---VGDFGLAKLLDRRDSHVTTAVRGTVGHIA 475
H+ ++HRD+K N+LL + + DFGLA + + D GT G+++
Sbjct: 119 CHQM---GVVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLS 174
Query: 476 PEYLSTGQSSEKTDVFGFGVLLLELITG 503
PE L + D++ GV+L L+ G
Sbjct: 175 PEVLRKEAYGKPVDIWACGVILYILLVG 202
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 96/213 (45%), Gaps = 18/213 (8%)
Query: 298 LQIATGNFSPKNILGQGGYGVVYK-GCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLA 356
+++ + P LG+G YGVV K +P+ ++AVKR++ T Q Q + M
Sbjct: 2 MEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRA---TVNSQEQKRLLMDLDI 58
Query: 357 LHRNL-----LRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALG 411
R + + YG + + M + S+ + + + IA+
Sbjct: 59 SMRTVDCPFTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVS 117
Query: 412 TARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTV 471
+ L +LH + + +IHRDVK +N+L++ + + DFG++ L D G
Sbjct: 118 IVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYL--VDDVAKDIDAGCK 173
Query: 472 GHIAPEY----LSTGQSSEKTDVFGFGVLLLEL 500
++APE L+ S K+D++ G+ ++EL
Sbjct: 174 PYMAPERINPELNQKGYSVKSDIWSLGITMIEL 206
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 108/270 (40%), Gaps = 36/270 (13%)
Query: 311 LGQGGYGVVYKGCLP--------NRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLL 362
LGQG + ++KG + V +K L + F M+ H++L+
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 363 RLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQ 422
YG C+ +E +LV ++ GS+ L+ + L W ++ +A A + +L E
Sbjct: 76 LNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINIL-W--KLEVAKQLAAAMHFLEEN 132
Query: 423 CNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTA---VRGTVGHIAPEYL 479
+IH +V A NILL + G+ KL D S ++ + + PE +
Sbjct: 133 T---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECI 189
Query: 480 STGQS-SEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDR 538
++ + TD + FG L E+ +G G+ + L +R+L DR
Sbjct: 190 ENPKNLNLATDKWSFGTTLWEICSG------GDKPLS---------ALDSQRKLQFYEDR 234
Query: 539 DLKGSFDPTELEKMVQLALQCTQSHPNLRP 568
+ EL ++ C P+ RP
Sbjct: 235 HQLPAPKAAELANLIN---NCMDYEPDHRP 261
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 8/113 (7%)
Query: 414 RGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGH 473
RGL Y+H + IIHRD+K +N+ ++E E + D GLA+ D T T +
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDE----MTGYVATRWY 188
Query: 474 IAPE-YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
APE L+ ++ D++ G ++ EL+TG+ + Q +IL V T
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 11/128 (8%)
Query: 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAA 435
+V Y+ G + LR + P H A+ +L + +I+RD+K
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFXEP-------HARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 436 NILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGV 495
N+L+D+ V DFG AK + R T + GT ++APE + + ++ D + GV
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 496 LLLELITG 503
L+ E+ G
Sbjct: 227 LIYEMAAG 234
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 98/212 (46%), Gaps = 31/212 (14%)
Query: 306 SPKNILGQGGYGVVYKGCLPNRM--VVAVKRLKDPNFTGEV---QFQTEVEMIGLALHRN 360
SP ++ G G YG V + R VA+K+L P F E+ + E+ ++ H N
Sbjct: 28 SPTHV-GSGAYGSVC-SAIDKRSGEKVAIKKLSRP-FQSEIFAKRAYRELLLLKHMQHEN 84
Query: 361 LLRLYGFCMTPEERL-------LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTA 413
++ L TP L LV P+M L+ K + ++
Sbjct: 85 VIGLLD-VFTPASSLRNFYDFYLVMPFMQTD-----LQKIMGLK--FSEEKIQYLVYQML 136
Query: 414 RGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGH 473
+GL Y+H + ++HRD+K N+ ++E E + DFGLA+ D+ +T V T +
Sbjct: 137 KGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLAR---HADAEMTGYV-VTRWY 189
Query: 474 IAPE-YLSTGQSSEKTDVFGFGVLLLELITGQ 504
APE LS ++ D++ G ++ E++TG+
Sbjct: 190 RAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 11/128 (8%)
Query: 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAA 435
+V Y+ G + LR + P H A+ +L + +I+RD+K
Sbjct: 113 MVMEYVAGGEMFSHLRRIGRFXEP-------HARFYAAQIVLTFEYLHSLDLIYRDLKPE 165
Query: 436 NILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGV 495
N+L+D+ V DFG AK + R T + GT ++APE + + ++ D + GV
Sbjct: 166 NLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 221
Query: 496 LLLELITG 503
L+ E+ G
Sbjct: 222 LIYEMAAG 229
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 11/128 (8%)
Query: 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAA 435
+V Y+ G + LR + P H A+ +L + +I+RD+K
Sbjct: 139 MVMEYVAGGEMFSHLRRIGRFXEP-------HARFYAAQIVLTFEYLHSLDLIYRDLKPE 191
Query: 436 NILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGV 495
N+L+D+ V DFG AK + R T + GT ++APE + + ++ D + GV
Sbjct: 192 NLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 247
Query: 496 LLLELITG 503
L+ E+ G
Sbjct: 248 LIYEMAAG 255
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 94/211 (44%), Gaps = 24/211 (11%)
Query: 311 LGQGGYGVVYKGCLPNRM---VVAVKR--LKDPNFTGEVQFQTEVEMIGLALHRNLLRLY 365
+G+G YG V+K NR +VA+KR L D + E+ ++ H+N++RL+
Sbjct: 10 IGEGTYGTVFKA--KNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 366 GFCMTPEERLLVYPYMPNGSVADCLRDTRQ----AKPPLDWNRRMHIALGTARGLLYLHE 421
+ ++ LV+ + C +D ++ LD +GL + H
Sbjct: 68 DVLHSDKKLTLVFEF--------CDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS 119
Query: 422 QCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLST 481
+ ++HRD+K N+L++ + E + DFGLA+ +A T+ + P+ L
Sbjct: 120 R---NVLHRDLKPQNLLINRNGELKLADFGLARAFG-IPVRCYSAEVVTLWYRPPDVLFG 175
Query: 482 GQ-SSEKTDVFGFGVLLLELITGQKALDVGN 511
+ S D++ G + EL + L GN
Sbjct: 176 AKLYSTSIDMWSAGCIFAELANAARPLFPGN 206
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 11/128 (8%)
Query: 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAA 435
+V Y+ G + LR + P H A+ +L + +I+RD+K
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 436 NILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGV 495
N+L+D+ V DFG AK + R T + GT ++APE + + ++ D + GV
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 496 LLLELITG 503
L+ E+ G
Sbjct: 227 LIYEMAAG 234
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 107/270 (39%), Gaps = 36/270 (13%)
Query: 311 LGQGGYGVVYKGCLP--------NRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLL 362
LGQG + ++KG + V +K L + F M+ H++L+
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 363 RLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQ 422
YG C +E +LV ++ GS+ L+ + L W ++ +A A + +L E
Sbjct: 76 LNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINIL-W--KLEVAKQLAWAMHFLEEN 132
Query: 423 CNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTA---VRGTVGHIAPEYL 479
+IH +V A NILL + G+ KL D S ++ + + PE +
Sbjct: 133 T---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECI 189
Query: 480 STGQS-SEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDR 538
++ + TD + FG L E+ +G G+ + L +R+L DR
Sbjct: 190 ENPKNLNLATDKWSFGTTLWEICSG------GDKPLS---------ALDSQRKLQFYEDR 234
Query: 539 DLKGSFDPTELEKMVQLALQCTQSHPNLRP 568
+ EL ++ C P+ RP
Sbjct: 235 HQLPAPKAAELANLIN---NCMDYEPDHRP 261
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 13/129 (10%)
Query: 376 LVYPYMPNGSVADCLRDT-RQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKA 434
+V Y+ G + LR R A+P H A+ +L + +I+RD+K
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFAEP--------HARFYAAQIVLTFEYLHSLDLIYRDLKP 169
Query: 435 ANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFG 494
N+L+D+ V DFG AK + R T + GT ++APE + + ++ D + G
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 495 VLLLELITG 503
VL+ E+ G
Sbjct: 226 VLIYEMAAG 234
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 11/128 (8%)
Query: 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAA 435
+V Y+ G + LR + P H A+ +L + +I+RD+K
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 436 NILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGV 495
N+L+D+ V DFG AK + R T + GT ++APE + + ++ D + GV
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 496 LLLELITG 503
L+ E+ G
Sbjct: 227 LIYEMAAG 234
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 99/228 (43%), Gaps = 18/228 (7%)
Query: 304 NFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDP--NFTGEVQFQTEVEMIGLALHRN 360
N SP +G G YG V + VAVK+L P + + E+ ++ H N
Sbjct: 26 NLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 361 LLRLYGFCMTPEERLLVYP--YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++ L TP L + Y+ + L + + + D + + RGL Y
Sbjct: 83 VIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD-DHVQFLIYQILRGLKY 140
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPE- 477
+H + IIHRD+K +N+ ++E E + D GLA+ D T T + APE
Sbjct: 141 IH---SADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDE----MTGYVATRWYRAPEI 193
Query: 478 YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525
L+ ++ D++ G ++ EL+TG+ + Q +IL V T
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 11/128 (8%)
Query: 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAA 435
+V Y+ G + LR + P H A+ +L + +I+RD+K
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 436 NILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGV 495
N+L+D+ V DFG AK + R T + GT ++APE + + ++ D + GV
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 496 LLLELITG 503
L+ E+ G
Sbjct: 227 LIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 11/128 (8%)
Query: 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAA 435
+V Y+ G + LR + P H A+ +L + +I+RD+K
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 436 NILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGV 495
N+L+D+ V DFG AK + R T + GT ++APE + + ++ D + GV
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 496 LLLELITG 503
L+ E+ G
Sbjct: 227 LIYEMAAG 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 11/128 (8%)
Query: 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAA 435
+V Y+ G + LR + P H A+ +L + +I+RD+K
Sbjct: 119 MVMEYVAGGEMFSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHSLDLIYRDLKPE 171
Query: 436 NILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGV 495
N+L+D+ V DFG AK + R T + GT ++APE + + ++ D + GV
Sbjct: 172 NLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 496 LLLELITG 503
L+ E+ G
Sbjct: 228 LIYEMAAG 235
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHI 474
L YLH + +++RD+K N++LD+ + DFGL K D GT ++
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFCGTPEYL 172
Query: 475 APEYLSTGQSSEKTDVFGFGVLLLELITGQ 504
APE L D +G GV++ E++ G+
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 11/128 (8%)
Query: 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAA 435
+V Y+ G + LR + P H A+ +L + +I+RD+K
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFXEP-------HARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 436 NILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGV 495
N+L+D+ V DFG AK + R T + GT ++APE + + ++ D + GV
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 496 LLLELITG 503
L+ E+ G
Sbjct: 227 LIYEMAAG 234
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 11/128 (8%)
Query: 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAA 435
+V Y+ G + LR + P H A+ +L + +I+RD+K
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 436 NILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGV 495
N+L+D+ V DFG AK + R T + GT ++APE + + ++ D + GV
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 496 LLLELITG 503
L+ E+ G
Sbjct: 227 LIYEMAAG 234
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 11/128 (8%)
Query: 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAA 435
+V Y+ G + LR + P H A+ +L + +I+RD+K
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFXEP-------HARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 436 NILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGV 495
N+L+D+ V DFG AK + R T + GT ++APE + + ++ D + GV
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 496 LLLELITG 503
L+ E+ G
Sbjct: 227 LIYEMAAG 234
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 304 NFSPKNILGQGGYGVV---YKGCLPNRMVVAVKRLKDP--NFTGEVQFQTEVEMIGLALH 358
N P +G G G+V Y L VA+K+L P N T + E+ ++ H
Sbjct: 28 NLKP---IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 359 RNLLRLYGFCMTPEERLL----VYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTAR 414
+N++ L TP++ L VY M C + + LD R ++
Sbjct: 83 KNIIGLLN-VFTPQKSLEEFQDVYIVMELMDANLC----QVIQMELDHERMSYLLYQMLC 137
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHI 474
G+ +LH + IIHRD+K +NI++ + DFGLA+ S + T T +
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTRYYR 192
Query: 475 APEYLSTGQSSEKTDVFGFGVLLLELITG 503
APE + E D++ G ++ E+I G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 11/128 (8%)
Query: 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAA 435
+V Y+ G + LR + P H A+ +L + +I+RD+K
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 436 NILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGV 495
N+L+D+ V DFG AK + R T + GT ++APE + + ++ D + GV
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 496 LLLELITG 503
L+ E+ G
Sbjct: 227 LIYEMAAG 234
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 304 NFSPKNILGQGGYGVV---YKGCLPNRMVVAVKRLKDP--NFTGEVQFQTEVEMIGLALH 358
N P +G G G+V Y L VA+K+L P N T + E+ ++ H
Sbjct: 29 NLKP---IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 83
Query: 359 RNLLRLYGFCMTPEERLL----VYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTAR 414
+N++ L TP++ L VY M C + + LD R ++
Sbjct: 84 KNIIGLLN-VFTPQKSLEEFQDVYIVMELMDANLC----QVIQMELDHERMSYLLYQMLC 138
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHI 474
G+ +LH + IIHRD+K +NI++ + DFGLA+ S + T T +
Sbjct: 139 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTRYYR 193
Query: 475 APEYLSTGQSSEKTDVFGFGVLLLELITG 503
APE + E D++ G ++ E+I G
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 114/268 (42%), Gaps = 54/268 (20%)
Query: 308 KNILGQGGYG-VVYKGCLPNRMVVAVKRLKDPNFTG----EVQFQTEVEMIGLALHRNLL 362
+ ILG G G VV++G R VAVKR+ +F E++ TE + H N++
Sbjct: 20 EKILGYGSSGTVVFQGSFQGR-PVAVKRML-IDFCDIALMEIKLLTESDD-----HPNVI 72
Query: 363 RLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMH-----IAL--GTARG 415
R Y C +R L Y+ L+D ++K D N ++ I+L A G
Sbjct: 73 RYY--CSETTDRFL---YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASG 127
Query: 416 LLYLHEQCNPKIIHRDVKAANILLD-------------ESFEAVVGDFGLAKLLDRRDSH 462
+ +LH KIIHRD+K NIL+ E+ ++ DFGL K LD
Sbjct: 128 VAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXX 184
Query: 463 VTTAVR---GTVGHIAPEYLSTGQS-------SEKTDVFGFGVLLLELITGQKALDVGNG 512
+ GT G APE L + + D+F G + +++ K G+
Sbjct: 185 FRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKH-PFGDK 243
Query: 513 QVQKGMILDCVRTLHEERRLDVLIDRDL 540
++ I+ + +L E + L DR L
Sbjct: 244 YSRESNIIRGIFSLDE---MKCLHDRSL 268
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHI 474
L YLH + +++RD+K N++LD+ + DFGL K D GT ++
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFCGTPEYL 172
Query: 475 APEYLSTGQSSEKTDVFGFGVLLLELITGQ 504
APE L D +G GV++ E++ G+
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 89/202 (44%), Gaps = 21/202 (10%)
Query: 311 LGQGGYGVV---YKGCLPNRMVVAVKRLKDP--NFTGEVQFQTEVEMIGLALHRNLLRLY 365
+G G G+V Y L VA+K+L P N T + E+ ++ H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 366 GFCMTPEERLL----VYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHE 421
TP++ L VY M C + + LD R ++ G+ +LH
Sbjct: 90 N-VFTPQKSLEEFQDVYIVMELMDANLC----QVIQMELDHERMSYLLYQMLCGIKHLH- 143
Query: 422 QCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLST 481
+ IIHRD+K +NI++ + DFGLA+ S + T T + APE +
Sbjct: 144 --SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILG 199
Query: 482 GQSSEKTDVFGFGVLLLELITG 503
E D++ G ++ E+I G
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKG 221
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 11/128 (8%)
Query: 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAA 435
+V Y+ G + LR + P H A+ +L + +I+RD+K
Sbjct: 139 MVMEYVAGGEMFSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHSLDLIYRDLKPE 191
Query: 436 NILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGV 495
N+L+D+ V DFG AK R T + GT ++APE + + ++ D + GV
Sbjct: 192 NLLIDQQGYIQVTDFGFAK----RVKGATWTLCGTPEYLAPEIILSKGYNKAVDWWALGV 247
Query: 496 LLLELITG 503
L+ E+ G
Sbjct: 248 LIYEMAAG 255
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHI 474
L YLH + +++RD+K N++LD+ + DFGL K D GT ++
Sbjct: 122 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYL 177
Query: 475 APEYLSTGQSSEKTDVFGFGVLLLELITGQ 504
APE L D +G GV++ E++ G+
Sbjct: 178 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHI 474
L YLH + +++RD+K N++LD+ + DFGL K D GT ++
Sbjct: 120 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFCGTPEYL 175
Query: 475 APEYLSTGQSSEKTDVFGFGVLLLELITGQ 504
APE L D +G GV++ E++ G+
Sbjct: 176 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHI 474
L YLH + +++RD+K N++LD+ + DFGL K D GT ++
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYL 172
Query: 475 APEYLSTGQSSEKTDVFGFGVLLLELITGQ 504
APE L D +G GV++ E++ G+
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 94/217 (43%), Gaps = 36/217 (16%)
Query: 302 TGNFSPKNILGQGGYGVVYKGCL--PNRMVVAVKRL----KDPNFTGEVQFQTEVEMIGL 355
T + K +G G Y V K C+ M AVK + +DP T E++ ++
Sbjct: 21 TDGYEVKEDIGVGSYSVC-KRCIHKATNMEFAVKIIDKSKRDP--TEEIEI-----LLRY 72
Query: 356 ALHRNLLRLYGFCMTPEERLLVYPYMPNGSVAD-CLRDT----RQAKPPLDWNRRMHIAL 410
H N++ L + +V M G + D LR R+A L
Sbjct: 73 GQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVL---------F 123
Query: 411 GTARGLLYLHEQCNPKIIHRDVKAANIL-LDESF--EAV-VGDFGLAKLLDRRDSHVTTA 466
+ + YLH Q ++HRD+K +NIL +DES E++ + DFG AK L + + T
Sbjct: 124 TITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTP 180
Query: 467 VRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITG 503
T +APE L D++ GVLL ++TG
Sbjct: 181 CY-TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHI 474
L YLH + +++RD+K N++LD+ + DFGL K D GT ++
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYL 172
Query: 475 APEYLSTGQSSEKTDVFGFGVLLLELITGQ 504
APE L D +G GV++ E++ G+
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHI 474
L YLH + +++RD+K N++LD+ + DFGL K D GT ++
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYL 172
Query: 475 APEYLSTGQSSEKTDVFGFGVLLLELITGQ 504
APE L D +G GV++ E++ G+
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 20/207 (9%)
Query: 304 NFSPKNILGQGGYGVV---YKGCLPNRMVVAVKRLKDP--NFTGEVQFQTEVEMIGLALH 358
N P +G G G+V Y L VA+K+L P N T + E+ ++ H
Sbjct: 28 NLKP---IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 359 RNLLRLYGFCMTPEERLLVYP--YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGL 416
+N++ L TP++ L + Y+ + L Q + LD R ++ G+
Sbjct: 83 KNIIGLLN-VFTPQKSLEEFQDVYIVMELMDANLSQVIQME--LDHERMSYLLYQMLCGI 139
Query: 417 LYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAP 476
+LH + IIHRD+K +NI++ + DFGLA+ S + T T + AP
Sbjct: 140 KHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAG--TSFMMTPYVVTRYYRAP 194
Query: 477 EYLSTGQSSEKTDVFGFGVLLLELITG 503
E + E D++ G ++ E+I G
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 20/207 (9%)
Query: 304 NFSPKNILGQGGYGVV---YKGCLPNRMVVAVKRLKDP--NFTGEVQFQTEVEMIGLALH 358
N P +G G G+V Y L VA+K+L P N T + E+ ++ H
Sbjct: 28 NLKP---IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 359 RNLLRLYGFCMTPEERLLVYP--YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGL 416
+N++ L TP++ L + Y+ + L Q + LD R ++ G+
Sbjct: 83 KNIIGLLN-VFTPQKSLEEFQDVYIVMELMDANLSQVIQME--LDHERMSYLLYQMLCGI 139
Query: 417 LYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAP 476
+LH + IIHRD+K +NI++ + DFGLA+ S + T T + AP
Sbjct: 140 KHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTRYYRAP 194
Query: 477 EYLSTGQSSEKTDVFGFGVLLLELITG 503
E + E D++ G ++ E+I G
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 11/128 (8%)
Query: 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAA 435
+V Y+ G + LR + P H A+ +L + +I+RD+K
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 436 NILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGV 495
N+++D+ V DFG AK + R T + GT ++APE + + ++ D + GV
Sbjct: 171 NLIIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIISKGYNKAVDWWALGV 226
Query: 496 LLLELITG 503
L+ E+ G
Sbjct: 227 LIYEMAAG 234
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 81/194 (41%), Gaps = 20/194 (10%)
Query: 327 RMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSV 386
+ + R DP E TE+E++ H ++++ F E+ +V M G +
Sbjct: 186 KFAIGSAREADPALNVE----TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGEL 240
Query: 387 ADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAV 446
D + ++ K + L YLHE IIHRD+K N+LL E
Sbjct: 241 FDKVVGNKRLKEATCKLYFYQMLLAVQ----YLHEN---GIIHRDLKPENVLLSSQEEDC 293
Query: 447 ---VGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYL---STGQSSEKTDVFGFGVLLLEL 500
+ DFG +K+L ++ + + GT ++APE L T + D + GV+L
Sbjct: 294 LIKITDFGHSKILG--ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 351
Query: 501 ITGQKALDVGNGQV 514
++G QV
Sbjct: 352 LSGYPPFSEHRTQV 365
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 97/212 (45%), Gaps = 31/212 (14%)
Query: 306 SPKNILGQGGYGVVYKGCLPNRM--VVAVKRLKDPNFTGEV---QFQTEVEMIGLALHRN 360
SP ++ G G YG V + R VA+K+L P F E+ + E+ ++ H N
Sbjct: 46 SPTHV-GSGAYGSVC-SAIDKRSGEKVAIKKLSRP-FQSEIFAKRAYRELLLLKHMQHEN 102
Query: 361 LLRLYGFCMTPEERL-------LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTA 413
++ L TP L LV P+M + + K ++
Sbjct: 103 VIGLLD-VFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEK-------IQYLVYQML 154
Query: 414 RGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGH 473
+GL Y+H + ++HRD+K N+ ++E E + DFGLA+ D+ +T V T +
Sbjct: 155 KGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLAR---HADAEMTGYV-VTRWY 207
Query: 474 IAPE-YLSTGQSSEKTDVFGFGVLLLELITGQ 504
APE LS ++ D++ G ++ E++TG+
Sbjct: 208 RAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 81/194 (41%), Gaps = 20/194 (10%)
Query: 327 RMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSV 386
+ + R DP E TE+E++ H ++++ F E+ +V M G +
Sbjct: 172 KFAIGSAREADPALNVE----TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGEL 226
Query: 387 ADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAV 446
D + ++ K + L YLHE IIHRD+K N+LL E
Sbjct: 227 FDKVVGNKRLKEATCKLYFYQMLLAVQ----YLHEN---GIIHRDLKPENVLLSSQEEDC 279
Query: 447 ---VGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYL---STGQSSEKTDVFGFGVLLLEL 500
+ DFG +K+L ++ + + GT ++APE L T + D + GV+L
Sbjct: 280 LIKITDFGHSKILG--ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 337
Query: 501 ITGQKALDVGNGQV 514
++G QV
Sbjct: 338 LSGYPPFSEHRTQV 351
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 89/202 (44%), Gaps = 21/202 (10%)
Query: 311 LGQGGYGVV---YKGCLPNRMVVAVKRLKDP--NFTGEVQFQTEVEMIGLALHRNLLRLY 365
+G G G+V Y L VA+K+L P N T + E+ ++ H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 366 GFCMTPEERLL----VYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHE 421
TP++ L VY M C + + LD R ++ G+ +LH
Sbjct: 90 N-VFTPQKSLEEFQDVYIVMELMDANLC----QVIQMELDHERMSYLLYQMLCGIKHLH- 143
Query: 422 QCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLST 481
+ IIHRD+K +NI++ + DFGLA+ S + T T + APE +
Sbjct: 144 --SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMTPEVVTRYYRAPEVILG 199
Query: 482 GQSSEKTDVFGFGVLLLELITG 503
E D++ G ++ E+I G
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKG 221
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 418 YLHEQCNPKIIHRDVKAANIL-LDESFEAV---VGDFGLAKLLDRRDSHVTTAVRGTVGH 473
YLH Q ++HRD+K +NIL +DES + DFG AK L + + T T
Sbjct: 136 YLHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY-TANF 191
Query: 474 IAPEYLSTGQSSEKTDVFGFGVLLLELITG 503
+APE L E D++ G+LL ++ G
Sbjct: 192 VAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 418 YLHEQCNPKIIHRDVKAANIL-LDESFEAV---VGDFGLAKLLDRRDSHVTTAVRGTVGH 473
YLH Q ++HRD+K +NIL +DES + DFG AK L + + T T
Sbjct: 136 YLHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY-TANF 191
Query: 474 IAPEYLSTGQSSEKTDVFGFGVLLLELITG 503
+APE L E D++ G+LL ++ G
Sbjct: 192 VAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 102/248 (41%), Gaps = 28/248 (11%)
Query: 296 RELQIATGNFSPKNILGQGGYGVVYKGCLPN-RMVVAVKRLKDPNFTGEVQ---FQTEVE 351
+E+Q+ +F ++G+G +G V + N + A+K L + F+ E +
Sbjct: 67 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERD 126
Query: 352 MIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNR----RMH 407
++ + + L+ LV Y G + L + K P D R M
Sbjct: 127 VLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKF-EDKLPEDMARFYIGEMV 185
Query: 408 IALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAV 467
+A+ + L Y +HRD+K N+LLD + + DFG ++ + ++
Sbjct: 186 LAIDSIHQLHY---------VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVA 236
Query: 468 RGTVGHIAPEYLST-----GQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDC 522
GT +I+PE L G+ + D + GV + E++ G+ + G I++
Sbjct: 237 VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN- 295
Query: 523 VRTLHEER 530
HEER
Sbjct: 296 ----HEER 299
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 100/233 (42%), Gaps = 34/233 (14%)
Query: 281 QDYEFDVGH-----LKRFSFRELQIATGNFSPKNILGQGGYGVV---YKGCLPNRMVVAV 332
Q Y +VG LKR+ N P +G G G+V Y L VA+
Sbjct: 9 QFYSVEVGDSTFTVLKRYQ---------NLKP---IGSGAQGIVCAAYDAVLDRN--VAI 54
Query: 333 KRLKDP--NFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYP--YMPNGSVAD 388
K+L P N T + E+ ++ H+N++ L TP++ L + Y+ +
Sbjct: 55 KKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLN-VFTPQKTLEEFQDVYLVMELMDA 113
Query: 389 CLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVG 448
L Q + LD R ++ G+ +LH + IIHRD+K +NI++ +
Sbjct: 114 NLXQVIQME--LDHERMSYLLYQMLXGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKIL 168
Query: 449 DFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELI 501
DFGLA+ S + T T + APE + E D++ G ++ E++
Sbjct: 169 DFGLARTAGT--SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 81/194 (41%), Gaps = 20/194 (10%)
Query: 327 RMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSV 386
+ + R DP E TE+E++ H ++++ F E+ +V M G +
Sbjct: 53 KFAIGSAREADPALNVE----TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGEL 107
Query: 387 ADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAV 446
D + ++ K + L YLHE IIHRD+K N+LL E
Sbjct: 108 FDKVVGNKRLKEATCKLYFYQMLLAVQ----YLHEN---GIIHRDLKPENVLLSSQEEDC 160
Query: 447 ---VGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYL---STGQSSEKTDVFGFGVLLLEL 500
+ DFG +K+L ++ + + GT ++APE L T + D + GV+L
Sbjct: 161 LIKITDFGHSKILG--ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 218
Query: 501 ITGQKALDVGNGQV 514
++G QV
Sbjct: 219 LSGYPPFSEHRTQV 232
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 108/254 (42%), Gaps = 40/254 (15%)
Query: 281 QDYEFDVGH-----LKRFSFRELQIATGNFSPKNILGQGGYGVV---YKGCLPNRMVVAV 332
Q Y +VG LKR+ N P +G G G+V Y L VA+
Sbjct: 9 QFYSVEVGDSTFTVLKRYQ---------NLKP---IGSGAQGIVCAAYDAVLDRN--VAI 54
Query: 333 KRLKDP--NFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYP--YMPNGSVAD 388
K+L P N T + E+ ++ H+N++ L TP++ L + Y+ +
Sbjct: 55 KKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLN-VFTPQKTLEEFQDVYLVMELMDA 113
Query: 389 CLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVG 448
L Q + LD R ++ G+ +LH + IIHRD+K +NI++ +
Sbjct: 114 NLXQVIQME--LDHERMSYLLYQMLXGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKIL 168
Query: 449 DFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELI------T 502
DFGLA+ S + T T + APE + E D++ G ++ E++
Sbjct: 169 DFGLARTAG--TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 226
Query: 503 GQKALDVGNGQVQK 516
G+ +D N +++
Sbjct: 227 GRDYIDQWNKVIEQ 240
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 11/128 (8%)
Query: 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAA 435
+V Y+ G + LR + P H A+ +L + +I+RD+K
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 436 NILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGV 495
N+L+D+ V DFG AK + R T + GT ++APE + + ++ D + GV
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 496 LLLELITG 503
L+ ++ G
Sbjct: 227 LIYQMAAG 234
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 102/248 (41%), Gaps = 28/248 (11%)
Query: 296 RELQIATGNFSPKNILGQGGYGVVYKGCLPN-RMVVAVKRLKDPNFTGEVQ---FQTEVE 351
+E+Q+ +F ++G+G +G V + N + A+K L + F+ E +
Sbjct: 83 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERD 142
Query: 352 MIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNR----RMH 407
++ + + L+ LV Y G + L + K P D R M
Sbjct: 143 VLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKF-EDKLPEDMARFYIGEMV 201
Query: 408 IALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAV 467
+A+ + L Y +HRD+K N+LLD + + DFG ++ + ++
Sbjct: 202 LAIDSIHQLHY---------VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVA 252
Query: 468 RGTVGHIAPEYLST-----GQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDC 522
GT +I+PE L G+ + D + GV + E++ G+ + G I++
Sbjct: 253 VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN- 311
Query: 523 VRTLHEER 530
HEER
Sbjct: 312 ----HEER 315
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 81/194 (41%), Gaps = 20/194 (10%)
Query: 327 RMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSV 386
+ + R DP E TE+E++ H ++++ F E+ +V M G +
Sbjct: 47 KFAIGSAREADPALNVE----TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGEL 101
Query: 387 ADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAV 446
D + ++ K + L YLHE IIHRD+K N+LL E
Sbjct: 102 FDKVVGNKRLKEATCKLYFYQMLLAVQ----YLHEN---GIIHRDLKPENVLLSSQEEDC 154
Query: 447 ---VGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYL---STGQSSEKTDVFGFGVLLLEL 500
+ DFG +K+L ++ + + GT ++APE L T + D + GV+L
Sbjct: 155 LIKITDFGHSKILG--ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 212
Query: 501 ITGQKALDVGNGQV 514
++G QV
Sbjct: 213 LSGYPPFSEHRTQV 226
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 108/254 (42%), Gaps = 40/254 (15%)
Query: 281 QDYEFDVGH-----LKRFSFRELQIATGNFSPKNILGQGGYGVV---YKGCLPNRMVVAV 332
Q Y +VG LKR+ N P +G G G+V Y L VA+
Sbjct: 2 QFYSVEVGDSTFTVLKRYQ---------NLKP---IGSGAQGIVCAAYDAVLDRN--VAI 47
Query: 333 KRLKDP--NFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYP--YMPNGSVAD 388
K+L P N T + E+ ++ H+N++ L TP++ L + Y+ +
Sbjct: 48 KKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLN-VFTPQKTLEEFQDVYLVMELMDA 106
Query: 389 CLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVG 448
L Q + LD R ++ G+ +LH + IIHRD+K +NI++ +
Sbjct: 107 NLXQVIQME--LDHERMSYLLYQMLXGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKIL 161
Query: 449 DFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELI------T 502
DFGLA+ S + T T + APE + E D++ G ++ E++
Sbjct: 162 DFGLARTAG--TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 219
Query: 503 GQKALDVGNGQVQK 516
G+ +D N +++
Sbjct: 220 GRDYIDQWNKVIEQ 233
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 81/194 (41%), Gaps = 20/194 (10%)
Query: 327 RMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSV 386
+ + R DP E TE+E++ H ++++ F E+ +V M G +
Sbjct: 46 KFAIGSAREADPALNVE----TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGEL 100
Query: 387 ADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAV 446
D + ++ K + L YLHE IIHRD+K N+LL E
Sbjct: 101 FDKVVGNKRLKEATCKLYFYQMLLAVQ----YLHEN---GIIHRDLKPENVLLSSQEEDC 153
Query: 447 ---VGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYL---STGQSSEKTDVFGFGVLLLEL 500
+ DFG +K+L ++ + + GT ++APE L T + D + GV+L
Sbjct: 154 LIKITDFGHSKILG--ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 211
Query: 501 ITGQKALDVGNGQV 514
++G QV
Sbjct: 212 LSGYPPFSEHRTQV 225
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 96/207 (46%), Gaps = 24/207 (11%)
Query: 310 ILGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFT--GEVQFQTEVEMIGLALHR------N 360
+LG GG+G VY G + + + VA+K ++ + GE+ T V M + L +
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 361 LLRLYGFCMTPEERLLVYPYM-PNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYL 419
++RL + P+ +L+ M P + D + + + L A +L
Sbjct: 75 VIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEEL--------ARSFFWQVLEA 126
Query: 420 HEQC-NPKIIHRDVKAANILLD-ESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPE 477
C N ++HRD+K NIL+D E + DFG LL +D+ V T GT + PE
Sbjct: 127 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPPE 183
Query: 478 YLSTGQSSEKT-DVFGFGVLLLELITG 503
++ + ++ V+ G+LL +++ G
Sbjct: 184 WIRYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 81/194 (41%), Gaps = 20/194 (10%)
Query: 327 RMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSV 386
+ + R DP E TE+E++ H ++++ F E+ +V M G +
Sbjct: 47 KFAIGSAREADPALNVE----TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGEL 101
Query: 387 ADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAV 446
D + ++ K + L YLHE IIHRD+K N+LL E
Sbjct: 102 FDKVVGNKRLKEATCKLYFYQMLLAVQ----YLHEN---GIIHRDLKPENVLLSSQEEDC 154
Query: 447 ---VGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYL---STGQSSEKTDVFGFGVLLLEL 500
+ DFG +K+L ++ + + GT ++APE L T + D + GV+L
Sbjct: 155 LIKITDFGHSKILG--ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 212
Query: 501 ITGQKALDVGNGQV 514
++G QV
Sbjct: 213 LSGYPPFSEHRTQV 226
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 81/194 (41%), Gaps = 20/194 (10%)
Query: 327 RMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSV 386
+ + R DP E TE+E++ H ++++ F E+ +V M G +
Sbjct: 47 KFAIGSAREADPALNVE----TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGEL 101
Query: 387 ADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAV 446
D + ++ K + L YLHE IIHRD+K N+LL E
Sbjct: 102 FDKVVGNKRLKEATCKLYFYQMLLAVQ----YLHEN---GIIHRDLKPENVLLSSQEEDC 154
Query: 447 ---VGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYL---STGQSSEKTDVFGFGVLLLEL 500
+ DFG +K+L ++ + + GT ++APE L T + D + GV+L
Sbjct: 155 LIKITDFGHSKILG--ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 212
Query: 501 ITGQKALDVGNGQV 514
++G QV
Sbjct: 213 LSGYPPFSEHRTQV 226
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 89/200 (44%), Gaps = 16/200 (8%)
Query: 311 LGQGGYGVVYKGCL---PNRMVVA-VKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYG 366
LG+G + VV + C+ P + A + K + + + E + L H N++RL+
Sbjct: 39 LGKGAFSVV-RRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 97
Query: 367 FCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPK 426
LV+ + G + + + R+ D + +H L + ++H+
Sbjct: 98 SISEEGFHYLVFDLVTGGELFEDIV-AREYYSEADASHCIHQILESVN---HIHQH---D 150
Query: 427 IIHRDVKAANILLDESFEAV---VGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQ 483
I+HRD+K N+LL + + DFGLA + + + GT G+++PE L
Sbjct: 151 IVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGEQQAWFGFAGTPGYLSPEVLRKDP 209
Query: 484 SSEKTDVFGFGVLLLELITG 503
+ D++ GV+L L+ G
Sbjct: 210 YGKPVDIWACGVILYILLVG 229
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 90/209 (43%), Gaps = 24/209 (11%)
Query: 304 NFSPKNILGQGGYGVV---YKGCLPNRMVVAVKRLKDP--NFTGEVQFQTEVEMIGLALH 358
N P +G G G+V Y L VA+K+L P N T + E+ ++ H
Sbjct: 30 NLKP---IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 84
Query: 359 RNLLRLYGFCMTPEERLL----VYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTAR 414
+N++ L TP++ L VY M C + + LD R ++
Sbjct: 85 KNIIGLLN-VFTPQKSLEEFQDVYIVMELMDANLC----QVIQMELDHERMSYLLYQMLC 139
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHI 474
G+ +LH + IIHRD+K +NI++ + DFGLA+ V V T +
Sbjct: 140 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVV--TRYYR 194
Query: 475 APEYLSTGQSSEKTDVFGFGVLLLELITG 503
APE + E D++ G ++ E+I G
Sbjct: 195 APEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 11/128 (8%)
Query: 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAA 435
+V Y+ G + LR + P H A+ +L + +I+RD+K
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 436 NILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGV 495
N+L+D+ V DFG AK + R T + GT +APE + + ++ D + GV
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEALAPEIILSKGYNKAVDWWALGV 226
Query: 496 LLLELITG 503
L+ E+ G
Sbjct: 227 LIYEMAAG 234
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 107/256 (41%), Gaps = 44/256 (17%)
Query: 281 QDYEFDVGH-----LKRFSFRELQIATGNFSPKNILGQGGYGVV---YKGCLPNRMVVAV 332
Q Y +VG LKR+ N P +G G G+V Y L VA+
Sbjct: 9 QFYSVEVGDSTFTVLKRYQ---------NLKP---IGSGAQGIVCAAYDAVLDRN--VAI 54
Query: 333 KRLKDP--NFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLL----VYPYMPNGSV 386
K+L P N T + E+ ++ H+N++ L TP++ L VY M
Sbjct: 55 KKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLN-VFTPQKTLEEFQDVYLVMELMDA 113
Query: 387 ADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAV 446
C + + LD R ++ G+ +LH + IIHRD+K +NI++
Sbjct: 114 NLC----QVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDXTLK 166
Query: 447 VGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT---- 502
+ DFGLA+ S + T T + APE + E D++ G ++ E++
Sbjct: 167 ILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKIL 224
Query: 503 --GQKALDVGNGQVQK 516
G+ +D N +++
Sbjct: 225 FPGRDYIDQWNKVIEQ 240
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 99/235 (42%), Gaps = 38/235 (16%)
Query: 281 QDYEFDVGH-----LKRFSFRELQIATGNFSPKNILGQGGYGVV---YKGCLPNRMVVAV 332
Q Y +VG LKR+ N P +G G G+V Y L VA+
Sbjct: 47 QFYSVEVGDSTFTVLKRYQ---------NLKP---IGSGAQGIVCAAYDAVLDRN--VAI 92
Query: 333 KRLKDP--NFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLL----VYPYMPNGSV 386
K+L P N T + E+ ++ H+N++ L TP++ L VY M
Sbjct: 93 KKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV-FTPQKTLEEFQDVYLVMELMDA 151
Query: 387 ADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAV 446
C + + LD R ++ G+ +LH + IIHRD+K +NI++
Sbjct: 152 NLC----QVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLK 204
Query: 447 VGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELI 501
+ DFGLA+ S + T T + APE + E D++ G ++ E++
Sbjct: 205 ILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 100/233 (42%), Gaps = 34/233 (14%)
Query: 281 QDYEFDVGH-----LKRFSFRELQIATGNFSPKNILGQGGYGVV---YKGCLPNRMVVAV 332
Q Y +VG LKR+ N P +G G G+V Y L VA+
Sbjct: 9 QFYSVEVGDSTFTVLKRYQ---------NLKP---IGSGAQGIVCAAYDAVLDRN--VAI 54
Query: 333 KRLKDP--NFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYP--YMPNGSVAD 388
K+L P N T + E+ ++ H+N++ L TP++ L + Y+ +
Sbjct: 55 KKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLN-VFTPQKTLEEFQDVYLVMELMDA 113
Query: 389 CLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVG 448
L Q + LD R ++ G+ +LH + IIHRD+K +NI++ +
Sbjct: 114 NLXQVIQME--LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKIL 168
Query: 449 DFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELI 501
DFGLA+ S + T T + APE + E D++ G ++ E++
Sbjct: 169 DFGLARTAG--TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 95/226 (42%), Gaps = 29/226 (12%)
Query: 294 SFRELQIATGNFS------PKNILGQGGYGVVYKGCLPNRMV----VAVKRLKDP--NFT 341
F +Q+A F+ +G G G+V C V VAVK+L P N T
Sbjct: 7 QFYSVQVADSTFTVLKRYQQLKPIGSGAQGIV---CAAFDTVLGINVAVKKLSRPFQNQT 63
Query: 342 GEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLL----VYPYMPNGSVADCLRDTRQAK 397
+ E+ ++ H+N++ L TP++ L VY M C +
Sbjct: 64 HAKRAYRELVLLKCVNHKNIISLLN-VFTPQKTLEEFQDVYLVMELMDANLC----QVIH 118
Query: 398 PPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLD 457
LD R ++ G+ +LH + IIHRD+K +NI++ + DFGLA+
Sbjct: 119 MELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAS 175
Query: 458 RRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITG 503
+ + T T + APE + E D++ G ++ EL+ G
Sbjct: 176 T--NFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 100/238 (42%), Gaps = 28/238 (11%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMT 370
LG+G +G+V++ + + + T +V + E+ ++ +A HRN+L L+ +
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFES 72
Query: 371 PEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNP----- 425
EE ++++ ++ + + R + N R ++ Y+H+ C
Sbjct: 73 MEELVMIFEFISGLDIFE-----RINTSAFELNEREIVS--------YVHQVCEALQFLH 119
Query: 426 --KIIHRDVKAANILLDESFEAVVG--DFGLAKLLDRRDSH--VTTAVRGTVGHIAPEYL 479
I H D++ NI+ + + +FG A+ L D+ + TA + APE
Sbjct: 120 SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPE----YYAPEVH 175
Query: 480 STGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLID 537
S TD++ G L+ L++G Q I++ T EE ++ I+
Sbjct: 176 QHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIE 233
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 48/90 (53%), Gaps = 8/90 (8%)
Query: 418 YLHEQCNPKIIHRDVKAANIL-LDESF--EAV-VGDFGLAKLLDRRDSHVTTAVRGTVGH 473
YLH Q ++HRD+K +NIL +DES E++ + DFG AK L + + T T
Sbjct: 131 YLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCY-TANF 186
Query: 474 IAPEYLSTGQSSEKTDVFGFGVLLLELITG 503
+APE L D++ GVLL +TG
Sbjct: 187 VAPEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 50/100 (50%), Gaps = 9/100 (9%)
Query: 410 LGTA-RGLLYLHEQCNPKIIHRDVKAANILLD-ESFEAVVGDFGLAKLLDR----RDSHV 463
LG A GL YLH + +I+H DVKA N+LL + A + DFG A L +D
Sbjct: 172 LGQALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLT 228
Query: 464 TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITG 503
+ GT H+APE + K DV+ ++L ++ G
Sbjct: 229 GDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 90/203 (44%), Gaps = 22/203 (10%)
Query: 311 LGQGGYGVVYKGCLPNR--MVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRN---LLRLY 365
LG+G + VV + C+ A K LK + + + E+ L L ++ ++ L+
Sbjct: 37 LGRGKFAVV-RQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLH 95
Query: 366 GFCMTPEERLLVYPYMPNGSVAD-CLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCN 424
E +L+ Y G + CL + + D R + L G+ YLH+
Sbjct: 96 EVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQIL---EGVYYLHQN-- 150
Query: 425 PKIIHRDVKAANILLDESF---EAVVGDFGLAKLLDRRDSHVTT--AVRGTVGHIAPEYL 479
I+H D+K NILL + + + DFG++ R+ H + GT ++APE L
Sbjct: 151 -NIVHLDLKPQNILLSSIYPLGDIKIVDFGMS----RKIGHACELREIMGTPEYLAPEIL 205
Query: 480 STGQSSEKTDVFGFGVLLLELIT 502
+ + TD++ G++ L+T
Sbjct: 206 NYDPITTATDMWNIGIIAYMLLT 228
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 92/209 (44%), Gaps = 10/209 (4%)
Query: 298 LQIATGNFSPKNILGQGGYGVVYKG-CLPNRMVVAVKRLKDP-NFTGEVQFQTEVEMIGL 355
++ + P LG+G YGVV K +P+ + AVKR++ N + + ++++
Sbjct: 29 FEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXR 88
Query: 356 ALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARG 415
+ + + E + + + + S+ + + + IA+ +
Sbjct: 89 TVDCPFTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKA 148
Query: 416 LLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIA 475
L +LH + + +IHRDVK +N+L++ + DFG++ L D G + A
Sbjct: 149 LEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYL--VDDVAKDIDAGCKPYXA 204
Query: 476 PEY----LSTGQSSEKTDVFGFGVLLLEL 500
PE L+ S K+D++ G+ +EL
Sbjct: 205 PERINPELNQKGYSVKSDIWSLGITXIEL 233
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 94/211 (44%), Gaps = 24/211 (11%)
Query: 311 LGQGGYGVVYKGCLPNRM---VVAVKR--LKDPNFTGEVQFQTEVEMIGLALHRNLLRLY 365
+G+G YG V+K NR +VA+KR L D + E+ ++ H+N++RL+
Sbjct: 10 IGEGTYGTVFKA--KNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 366 GFCMTPEERLLVYPYMPNGSVADCLRDTRQ----AKPPLDWNRRMHIALGTARGLLYLHE 421
+ ++ LV+ + C +D ++ LD +GL + H
Sbjct: 68 DVLHSDKKLTLVFEF--------CDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS 119
Query: 422 QCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLST 481
+ ++HRD+K N+L++ + E + +FGLA+ +A T+ + P+ L
Sbjct: 120 R---NVLHRDLKPQNLLINRNGELKLANFGLARAFG-IPVRCYSAEVVTLWYRPPDVLFG 175
Query: 482 GQ-SSEKTDVFGFGVLLLELITGQKALDVGN 511
+ S D++ G + EL + L GN
Sbjct: 176 AKLYSTSIDMWSAGCIFAELANAGRPLFPGN 206
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 107/256 (41%), Gaps = 44/256 (17%)
Query: 281 QDYEFDVGH-----LKRFSFRELQIATGNFSPKNILGQGGYGVV---YKGCLPNRMVVAV 332
Q Y +VG LKR+ N P +G G G+V Y L VA+
Sbjct: 10 QFYSVEVGDSTFTVLKRYQ---------NLKP---IGSGAQGIVCAAYDAVLDRN--VAI 55
Query: 333 KRLKDP--NFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLL----VYPYMPNGSV 386
K+L P N T + E+ ++ H+N++ L TP++ L VY M
Sbjct: 56 KKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLN-VFTPQKTLEEFQDVYLVMELMDA 114
Query: 387 ADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAV 446
C + + LD R ++ G+ +LH + IIHRD+K +NI++
Sbjct: 115 NLC----QVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLK 167
Query: 447 VGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELI----- 501
+ DFGLA+ S + T T + APE + E D++ G ++ E++
Sbjct: 168 ILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKIL 225
Query: 502 -TGQKALDVGNGQVQK 516
G+ +D N +++
Sbjct: 226 FPGRDYIDQWNKVIEQ 241
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 58/128 (45%), Gaps = 11/128 (8%)
Query: 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAA 435
+V Y+ G + LR + P H A+ +L + +I+RD+K
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEP-------HARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 436 NILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGV 495
N+L+D+ V DFG AK + R T + GT ++AP + + ++ D + GV
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPAIILSKGYNKAVDWWALGV 226
Query: 496 LLLELITG 503
L+ E+ G
Sbjct: 227 LIYEMAAG 234
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 107/256 (41%), Gaps = 44/256 (17%)
Query: 281 QDYEFDVGH-----LKRFSFRELQIATGNFSPKNILGQGGYGVV---YKGCLPNRMVVAV 332
Q Y +VG LKR+ N P +G G G+V Y L VA+
Sbjct: 9 QFYSVEVGDSTFTVLKRYQ---------NLKP---IGSGAQGIVCAAYDAVLDRN--VAI 54
Query: 333 KRLKDP--NFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLL----VYPYMPNGSV 386
K+L P N T + E+ ++ H+N++ L TP++ L VY M
Sbjct: 55 KKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLN-VFTPQKTLEEFQDVYLVMELMDA 113
Query: 387 ADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAV 446
C + + LD R ++ G+ +LH + IIHRD+K +NI++
Sbjct: 114 NLC----QVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLK 166
Query: 447 VGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELI----- 501
+ DFGLA+ S + T T + APE + E D++ G ++ E++
Sbjct: 167 ILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKIL 224
Query: 502 -TGQKALDVGNGQVQK 516
G+ +D N +++
Sbjct: 225 FPGRDYIDQWNKVIEQ 240
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 107/256 (41%), Gaps = 44/256 (17%)
Query: 281 QDYEFDVGH-----LKRFSFRELQIATGNFSPKNILGQGGYGVV---YKGCLPNRMVVAV 332
Q Y +VG LKR+ N P +G G G+V Y L VA+
Sbjct: 9 QFYSVEVGDSTFTVLKRYQ---------NLKP---IGSGAQGIVCAAYDAVLDRN--VAI 54
Query: 333 KRLKDP--NFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLL----VYPYMPNGSV 386
K+L P N T + E+ ++ H+N++ L TP++ L VY M
Sbjct: 55 KKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLN-VFTPQKTLEEFQDVYLVMELMDA 113
Query: 387 ADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAV 446
C + + LD R ++ G+ +LH + IIHRD+K +NI++
Sbjct: 114 NLC----QVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLK 166
Query: 447 VGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELI----- 501
+ DFGLA+ S + T T + APE + E D++ G ++ E++
Sbjct: 167 ILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKIL 224
Query: 502 -TGQKALDVGNGQVQK 516
G+ +D N +++
Sbjct: 225 FPGRDYIDQWNKVIEQ 240
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 98/226 (43%), Gaps = 26/226 (11%)
Query: 311 LGQGGYGVVYKG-CLPNRMVVAVKR--LKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGF 367
+GQG +G V+K VA+K+ +++ + E++++ L H N++ L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 368 CMT---PEER-----LLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYL 419
C T P R LV+ + + +A L + + R M + L GL Y+
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLN---GLYYI 141
Query: 420 HEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL-----DRRDSHVTTAVRGTVGHI 474
H KI+HRD+KAAN+L+ + DFGLA+ + + + V T+ +
Sbjct: 142 HRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV--TLWYR 196
Query: 475 APE-YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMI 519
PE L D++G G ++ E+ T + Q Q +I
Sbjct: 197 PPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALI 242
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 107/256 (41%), Gaps = 44/256 (17%)
Query: 281 QDYEFDVGH-----LKRFSFRELQIATGNFSPKNILGQGGYGVV---YKGCLPNRMVVAV 332
Q Y +VG LKR+ N P +G G G+V Y L VA+
Sbjct: 8 QFYSVEVGDSTFTVLKRYQ---------NLKP---IGSGAQGIVCAAYDAVLDRN--VAI 53
Query: 333 KRLKDP--NFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLL----VYPYMPNGSV 386
K+L P N T + E+ ++ H+N++ L TP++ L VY M
Sbjct: 54 KKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLN-VFTPQKTLEEFQDVYLVMELMDA 112
Query: 387 ADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAV 446
C + + LD R ++ G+ +LH + IIHRD+K +NI++
Sbjct: 113 NLC----QVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLK 165
Query: 447 VGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELI----- 501
+ DFGLA+ S + T T + APE + E D++ G ++ E++
Sbjct: 166 ILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKIL 223
Query: 502 -TGQKALDVGNGQVQK 516
G+ +D N +++
Sbjct: 224 FPGRDYIDQWNKVIEQ 239
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 107/256 (41%), Gaps = 44/256 (17%)
Query: 281 QDYEFDVGH-----LKRFSFRELQIATGNFSPKNILGQGGYGVV---YKGCLPNRMVVAV 332
Q Y +VG LKR+ N P +G G G+V Y L VA+
Sbjct: 10 QFYSVEVGDSTFTVLKRYQ---------NLKP---IGSGAQGIVCAAYDAVLDRN--VAI 55
Query: 333 KRLKDP--NFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLL----VYPYMPNGSV 386
K+L P N T + E+ ++ H+N++ L TP++ L VY M
Sbjct: 56 KKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLN-VFTPQKTLEEFQDVYLVMELMDA 114
Query: 387 ADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAV 446
C + + LD R ++ G+ +LH + IIHRD+K +NI++
Sbjct: 115 NLC----QVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLK 167
Query: 447 VGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELI----- 501
+ DFGLA+ S + T T + APE + E D++ G ++ E++
Sbjct: 168 ILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKIL 225
Query: 502 -TGQKALDVGNGQVQK 516
G+ +D N +++
Sbjct: 226 FPGRDYIDQWNKVIEQ 241
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 88/200 (44%), Gaps = 21/200 (10%)
Query: 311 LGQGGYGVV---YKGCLPNRMVVAVKRLKDP--NFTGEVQFQTEVEMIGLALHRNLLRLY 365
+G G G+V Y L VA+K+L P N T + E+ ++ H+N++ L
Sbjct: 70 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 127
Query: 366 GFCMTPEERLL----VYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHE 421
TP++ L VY M C + + LD R ++ G+ +LH
Sbjct: 128 N-VFTPQKTLEEFQDVYLVMELMDANLC----QVIQMELDHERMSYLLYQMLCGIKHLH- 181
Query: 422 QCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLST 481
+ IIHRD+K +NI++ + DFGLA+ S + T T + APE +
Sbjct: 182 --SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILG 237
Query: 482 GQSSEKTDVFGFGVLLLELI 501
E D++ G ++ E++
Sbjct: 238 MGYKENVDIWSVGCIMGEMV 257
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 98/226 (43%), Gaps = 26/226 (11%)
Query: 311 LGQGGYGVVYKG-CLPNRMVVAVKR--LKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGF 367
+GQG +G V+K VA+K+ +++ + E++++ L H N++ L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 368 CMT---PEER-----LLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYL 419
C T P R LV+ + + +A L + + R M + L GL Y+
Sbjct: 86 CRTKASPYNRCKASIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLN---GLYYI 141
Query: 420 HEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL-----DRRDSHVTTAVRGTVGHI 474
H KI+HRD+KAAN+L+ + DFGLA+ + + + V T+ +
Sbjct: 142 HRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV--TLWYR 196
Query: 475 APE-YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMI 519
PE L D++G G ++ E+ T + Q Q +I
Sbjct: 197 PPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALI 242
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 98/226 (43%), Gaps = 26/226 (11%)
Query: 311 LGQGGYGVVYKG-CLPNRMVVAVKR--LKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGF 367
+GQG +G V+K VA+K+ +++ + E++++ L H N++ L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 368 CMT---PEER-----LLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYL 419
C T P R LV+ + + +A L + + R M + L GL Y+
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLN---GLYYI 141
Query: 420 HEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL-----DRRDSHVTTAVRGTVGHI 474
H KI+HRD+KAAN+L+ + DFGLA+ + + + V T+ +
Sbjct: 142 HRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV--TLWYR 196
Query: 475 APE-YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMI 519
PE L D++G G ++ E+ T + Q Q +I
Sbjct: 197 PPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALI 242
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 98/226 (43%), Gaps = 26/226 (11%)
Query: 311 LGQGGYGVVYKG-CLPNRMVVAVKR--LKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGF 367
+GQG +G V+K VA+K+ +++ + E++++ L H N++ L
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 368 CMT---PEER-----LLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYL 419
C T P R LV+ + + +A L + + R M + L GL Y+
Sbjct: 85 CRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLN---GLYYI 140
Query: 420 HEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL-----DRRDSHVTTAVRGTVGHI 474
H KI+HRD+KAAN+L+ + DFGLA+ + + + V T+ +
Sbjct: 141 HRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV--TLWYR 195
Query: 475 APE-YLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMI 519
PE L D++G G ++ E+ T + Q Q +I
Sbjct: 196 PPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALI 241
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 95/231 (41%), Gaps = 25/231 (10%)
Query: 297 ELQIATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEV-----------Q 345
EL ++ + + G YG V G + VA+KR+ + G +
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 346 FQTEVEMIGLALHRNLLRLYGFCMTPEE----RLLVYPYMPNGSVADCLRDTRQAKPPLD 401
E+ ++ H N+L L + EE +L + + +A + D R P
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISP-- 133
Query: 402 WNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDS 461
HI LL LH ++HRD+ NILL ++ + + DF LA+ D D+
Sbjct: 134 ----QHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR-EDTADA 188
Query: 462 HVTTAVRGTVGHIAPEYLSTGQSSEK-TDVFGFGVLLLELITGQKALDVGN 511
+ T V + APE + + K D++ G ++ E+ +KAL G+
Sbjct: 189 NKTHYVTHR-WYRAPELVMQFKGFTKLVDMWSAGCVMAEMF-NRKALFRGS 237
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 107/256 (41%), Gaps = 44/256 (17%)
Query: 281 QDYEFDVGH-----LKRFSFRELQIATGNFSPKNILGQGGYGVV---YKGCLPNRMVVAV 332
Q Y +VG LKR+ N P +G G G+V Y L VA+
Sbjct: 2 QFYSVEVGDSTFTVLKRYQ---------NLKP---IGSGAQGIVCAAYDAVLDRN--VAI 47
Query: 333 KRLKDP--NFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLL----VYPYMPNGSV 386
K+L P N T + E+ ++ H+N++ L TP++ L VY M
Sbjct: 48 KKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLN-VFTPQKTLEEFQDVYLVMELMDA 106
Query: 387 ADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAV 446
C + + LD R ++ G+ +LH + IIHRD+K +NI++
Sbjct: 107 NLC----QVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLK 159
Query: 447 VGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELI----- 501
+ DFGLA+ S + T T + APE + E D++ G ++ E++
Sbjct: 160 ILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKIL 217
Query: 502 -TGQKALDVGNGQVQK 516
G+ +D N +++
Sbjct: 218 FPGRDYIDQWNKVIEQ 233
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 107/256 (41%), Gaps = 44/256 (17%)
Query: 281 QDYEFDVGH-----LKRFSFRELQIATGNFSPKNILGQGGYGVV---YKGCLPNRMVVAV 332
Q Y +VG LKR+ N P +G G G+V Y L VA+
Sbjct: 3 QFYSVEVGDSTFTVLKRYQ---------NLKP---IGSGAQGIVCAAYDAVLDRN--VAI 48
Query: 333 KRLKDP--NFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLL----VYPYMPNGSV 386
K+L P N T + E+ ++ H+N++ L TP++ L VY M
Sbjct: 49 KKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLN-VFTPQKTLEEFQDVYLVMELMDA 107
Query: 387 ADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAV 446
C + + LD R ++ G+ +LH + IIHRD+K +NI++
Sbjct: 108 NLC----QVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLK 160
Query: 447 VGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELI----- 501
+ DFGLA+ S + T T + APE + E D++ G ++ E++
Sbjct: 161 ILDFGLARTAGT--SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKIL 218
Query: 502 -TGQKALDVGNGQVQK 516
G+ +D N +++
Sbjct: 219 FPGRDYIDQWNKVIEQ 234
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 107/256 (41%), Gaps = 44/256 (17%)
Query: 281 QDYEFDVGH-----LKRFSFRELQIATGNFSPKNILGQGGYGVV---YKGCLPNRMVVAV 332
Q Y +VG LKR+ N P +G G G+V Y L VA+
Sbjct: 3 QFYSVEVGDSTFTVLKRYQ---------NLKP---IGSGAQGIVCAAYDAVLDRN--VAI 48
Query: 333 KRLKDP--NFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLL----VYPYMPNGSV 386
K+L P N T + E+ ++ H+N++ L TP++ L VY M
Sbjct: 49 KKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLN-VFTPQKTLEEFQDVYLVMELMDA 107
Query: 387 ADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAV 446
C + + LD R ++ G+ +LH + IIHRD+K +NI++
Sbjct: 108 NLC----QVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLK 160
Query: 447 VGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELI----- 501
+ DFGLA+ S + T T + APE + E D++ G ++ E++
Sbjct: 161 ILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKIL 218
Query: 502 -TGQKALDVGNGQVQK 516
G+ +D N +++
Sbjct: 219 FPGRDYIDQWNKVIEQ 234
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 95/231 (41%), Gaps = 25/231 (10%)
Query: 297 ELQIATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEV-----------Q 345
EL ++ + + G YG V G + VA+KR+ + G +
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 346 FQTEVEMIGLALHRNLLRLYGFCMTPEE----RLLVYPYMPNGSVADCLRDTRQAKPPLD 401
E+ ++ H N+L L + EE +L + + +A + D R P
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISP-- 133
Query: 402 WNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDS 461
HI LL LH ++HRD+ NILL ++ + + DF LA+ D D+
Sbjct: 134 ----QHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR-EDTADA 188
Query: 462 HVTTAVRGTVGHIAPEYLSTGQSSEK-TDVFGFGVLLLELITGQKALDVGN 511
+ T V + APE + + K D++ G ++ E+ +KAL G+
Sbjct: 189 NKTHYVTHR-WYRAPELVMQFKGFTKLVDMWSAGCVMAEMF-NRKALFRGS 237
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 119/282 (42%), Gaps = 43/282 (15%)
Query: 295 FRELQIATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVK--RLKDPNFTGEVQFQTEVEM 352
F+ + + +S +G GG V++ + + A+K L++ + ++ E+
Sbjct: 20 FQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAY 79
Query: 353 IG-LALHRN-LLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLD-WNRRMHIA 409
+ L H + ++RLY + +T + +Y M G++ L + K +D W R+ +
Sbjct: 80 LNKLQQHSDKIIRLYDYEITDQ---YIYMVMECGNID--LNSWLKKKKSIDPWERKSY-- 132
Query: 410 LGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVR- 468
L +H I+H D+K AN L+ + ++ DFG+A + + V +
Sbjct: 133 --WKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQV 189
Query: 469 GTVGHIAPEYLSTGQSSEKT-----------DVFGFGVLLLELITGQKALDVGNGQVQKG 517
GTV ++ PE + SS + DV+ G +L + G+
Sbjct: 190 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ--------- 240
Query: 518 MILDCVRTLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQC 559
I++ + LH +ID + + F P EK +Q L+C
Sbjct: 241 QIINQISKLH------AIIDPNHEIEF-PDIPEKDLQDVLKC 275
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 8/106 (7%)
Query: 416 LLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIA 475
L +LH Q ++H DVK ANI L +GDFGL L++ + G ++A
Sbjct: 170 LAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGL--LVELGTAGAGEVQEGDPRYMA 224
Query: 476 PEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNG--QVQKGMI 519
PE L G DVF G+ +LE+ + G G Q+++G +
Sbjct: 225 PELLQ-GSYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYL 269
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 87/202 (43%), Gaps = 20/202 (9%)
Query: 311 LGQGGYGVVYK------GCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRL 364
LG+G + VV + G M++ K+L + + + E + L H N++RL
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQ---KLEREARICRLLKHPNIVRL 75
Query: 365 YGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCN 424
+ L++ + G + + + R+ D + H +L+ H+
Sbjct: 76 HDSISEEGHHYLIFDLVTGGELFEDIV-AREYYSEADAS---HCIQQILEAVLHCHQM-- 129
Query: 425 PKIIHRDVKAANILLDESFEAV---VGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLST 481
++HR++K N+LL + + DFGLA ++ + GT G+++PE L
Sbjct: 130 -GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEG-EQQAWFGFAGTPGYLSPEVLRK 187
Query: 482 GQSSEKTDVFGFGVLLLELITG 503
+ D++ GV+L L+ G
Sbjct: 188 DPYGKPVDLWACGVILYILLVG 209
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 310 ILGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFT--GEVQFQTEVEMIGLALHR------N 360
+LG GG+G VY G + + + VA+K ++ + GE+ T V M + L +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 361 LLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLH 420
++RL + P+ +L+ + L D + L + + H
Sbjct: 71 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 127
Query: 421 EQCNPKIIHRDVKAANILLD-ESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYL 479
N ++HRD+K NIL+D E + DFG LL +D+ V T GT + PE++
Sbjct: 128 ---NXGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPPEWI 181
Query: 480 STGQSSEKT-DVFGFGVLLLELITG 503
+ ++ V+ G+LL +++ G
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 429 HRDVKAANILLDESFEAVVGDFGLAK-LLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEK 487
HRDVK NIL+ A + DFG+A D + + + V GT+ + APE S ++ +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTV-GTLYYXAPERFSESHATYR 215
Query: 488 TDVFGFGVLLLELITG 503
D++ +L E +TG
Sbjct: 216 ADIYALTCVLYECLTG 231
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 410 LGTA-RGLLYLHEQCNPKIIHRDVKAANILLD-ESFEAVVGDFGLAKLL--DRRDSHVTT 465
LG A GL YLH + +I+H DVKA N+LL + A + DFG A L D + T
Sbjct: 191 LGQALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLT 247
Query: 466 A--VRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITG 503
+ GT H+APE + K DV+ ++L ++ G
Sbjct: 248 GDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 84/200 (42%), Gaps = 16/200 (8%)
Query: 311 LGQGGYGVVYKGCLP----NRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYG 366
LG+G + VV + C+ + K + + + E + L H N++RL+
Sbjct: 30 LGKGAFSVV-RRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 88
Query: 367 FCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPK 426
L++ + G + + + R+ D + H +L+ H+
Sbjct: 89 SISEEGHHYLIFDLVTGGELFEDIV-AREYYSEADAS---HCIQQILEAVLHCHQM---G 141
Query: 427 IIHRDVKAANILLDESFEAV---VGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQ 483
++HRD+K N+LL + + DFGLA ++ + GT G+++PE L
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEG-EQQAWFGFAGTPGYLSPEVLRKDP 200
Query: 484 SSEKTDVFGFGVLLLELITG 503
+ D++ GV+L L+ G
Sbjct: 201 YGKPVDLWACGVILYILLVG 220
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 96/221 (43%), Gaps = 27/221 (12%)
Query: 311 LGQGGYGVV---YKGCLPNRMVVAVKRLKDP--NFTGEVQFQTEVEMIGLALHRNLLRLY 365
+G G G+V Y L VA+K+L P N T + E+ ++ H+N++ L
Sbjct: 37 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 94
Query: 366 GFCMTPEERLL----VYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHE 421
TP++ L VY M C + + LD R ++ G+ +LH
Sbjct: 95 N-VFTPQKSLEEFQDVYIVMELMDANLC----QVIQMELDHERMSYLLYQMLCGIKHLH- 148
Query: 422 QCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLST 481
+ IIHRD+K +NI++ + DFGLA+ S + T T + APE +
Sbjct: 149 --SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILG 204
Query: 482 GQSSEKTDVFGFGVLLLELI------TGQKALDVGNGQVQK 516
E D++ G ++ E++ G+ +D N +++
Sbjct: 205 MGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ 245
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 98/228 (42%), Gaps = 30/228 (13%)
Query: 304 NFSPKNILGQGGYGVV---YKGCLPNRMVVAVKRLKDP--NFTGEVQFQTEVEMIGLALH 358
N P +G G G+V Y L VA+K+L P N T + E+ ++ H
Sbjct: 22 NLKP---IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 76
Query: 359 RNLLRLYGFCMTPEERLL----VYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTAR 414
+N++ L TP++ L VY M C + + LD R ++
Sbjct: 77 KNIIGLLN-VFTPQKSLEEFQDVYIVMELMDANLC----QVIQMELDHERMSYLLYQMLC 131
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHI 474
G+ +LH + IIHRD+K +NI++ + DFGLA+ S + T T +
Sbjct: 132 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYR 186
Query: 475 APEYLSTGQSSEKTDVFGFGVLLLELI------TGQKALDVGNGQVQK 516
APE + E D++ G ++ E++ G+ +D N +++
Sbjct: 187 APEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ 234
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 310 ILGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFT--GEVQFQTEVEMIGLALHR------N 360
+LG GG+G VY G + + + VA+K ++ + GE+ T V M + L +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 361 LLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLH 420
++RL + P+ +L+ + L D + L + + H
Sbjct: 104 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 160
Query: 421 EQCNPKIIHRDVKAANILLD-ESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYL 479
N ++HRD+K NIL+D E + DFG LL +D+ V T GT + PE++
Sbjct: 161 ---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPPEWI 214
Query: 480 STGQSSEKT-DVFGFGVLLLELITG 503
+ ++ V+ G+LL +++ G
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 119/282 (42%), Gaps = 43/282 (15%)
Query: 295 FRELQIATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVK--RLKDPNFTGEVQFQTEVEM 352
F+ + + +S +G GG V++ + + A+K L++ + ++ E+
Sbjct: 20 FQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAY 79
Query: 353 IG-LALHRN-LLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLD-WNRRMHIA 409
+ L H + ++RLY + +T + +Y M G++ L + K +D W R+ +
Sbjct: 80 LNKLQQHSDKIIRLYDYEITDQ---YIYMVMECGNID--LNSWLKKKKSIDPWERKSYWK 134
Query: 410 LGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVR- 468
+ +H+ I+H D+K AN L+ + ++ DFG+A + V +
Sbjct: 135 -NMLEAVHTIHQHG---IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDXXXVVKDSQV 189
Query: 469 GTVGHIAPEYLSTGQSSEKT-----------DVFGFGVLLLELITGQKALDVGNGQVQKG 517
GTV ++ PE + SS + DV+ G +L + G+
Sbjct: 190 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ--------- 240
Query: 518 MILDCVRTLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQC 559
I++ + LH +ID + + F P EK +Q L+C
Sbjct: 241 QIINQISKLH------AIIDPNHEIEF-PDIPEKDLQDVLKC 275
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 310 ILGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFT--GEVQFQTEVEMIGLALHR------N 360
+LG GG+G VY G + + + VA+K ++ + GE+ T V M + L +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 361 LLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLH 420
++RL + P+ +L+ + L D + L + + H
Sbjct: 103 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 159
Query: 421 EQCNPKIIHRDVKAANILLD-ESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYL 479
N ++HRD+K NIL+D E + DFG LL +D+ V T GT + PE++
Sbjct: 160 ---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPPEWI 213
Query: 480 STGQSSEKT-DVFGFGVLLLELITG 503
+ ++ V+ G+LL +++ G
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 310 ILGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFT--GEVQFQTEVEMIGLALHR------N 360
+LG GG+G VY G + + + VA+K ++ + GE+ T V M + L +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 361 LLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLH 420
++RL + P+ +L+ + L D + L + + H
Sbjct: 104 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 160
Query: 421 EQCNPKIIHRDVKAANILLD-ESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYL 479
N ++HRD+K NIL+D E + DFG LL +D+ V T GT + PE++
Sbjct: 161 ---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPPEWI 214
Query: 480 STGQSSEKT-DVFGFGVLLLELITG 503
+ ++ V+ G+LL +++ G
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 310 ILGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFT--GEVQFQTEVEMIGLALHR------N 360
+LG GG+G VY G + + + VA+K ++ + GE+ T V M + L +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 361 LLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLH 420
++RL + P+ +L+ + L D + L + + H
Sbjct: 104 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 160
Query: 421 EQCNPKIIHRDVKAANILLD-ESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYL 479
N ++HRD+K NIL+D E + DFG LL +D+ V T GT + PE++
Sbjct: 161 ---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPPEWI 214
Query: 480 STGQSSEKT-DVFGFGVLLLELITG 503
+ ++ V+ G+LL +++ G
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 114/266 (42%), Gaps = 43/266 (16%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVK--RLKDPNFTGEVQFQTEVEMIG-LALHRN-LLRLYG 366
+G GG V++ + + A+K L++ + ++ E+ + L H + ++RLY
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 367 FCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLD-WNRRMHIALGTARGLLYLHEQCNP 425
+ +T + +Y M G++ L + K +D W R+ + + +H+
Sbjct: 124 YEITDQ---YIYMVMECGNID--LNSWLKKKKSIDPWERKSYWK-NMLEAVHTIHQHG-- 175
Query: 426 KIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVR-GTVGHIAPEYLSTGQS 484
I+H D+K AN L+ + ++ DFG+A + + V + GTV ++ PE + S
Sbjct: 176 -IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 233
Query: 485 SEKT-----------DVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLD 533
S + DV+ G +L + G+ I++ + LH
Sbjct: 234 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ---------QIINQISKLH------ 278
Query: 534 VLIDRDLKGSFDPTELEKMVQLALQC 559
+ID + + F P EK +Q L+C
Sbjct: 279 AIIDPNHEIEF-PDIPEKDLQDVLKC 303
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 78/179 (43%), Gaps = 11/179 (6%)
Query: 304 NFSPKNILGQGGYGVVY----KGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHR 359
N+ K+++G+G YG VY K N + V R+ + + + E+ ++
Sbjct: 29 NYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFE-DLIDCKRILREITILNRLKSD 87
Query: 360 NLLRLYGFCMTPEERLLVYPYMPNGSVADC-LRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++RL+ + PE+ L +AD L+ + L I G +
Sbjct: 88 YIIRLHDL-IIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKF 146
Query: 419 LHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDR-RDSHVTTAVRGTVGHIAP 476
+HE IIHRD+K AN LL++ + DFGLA+ ++ +D H+ + + P
Sbjct: 147 IHESG---IIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEP 202
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 310 ILGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFT--GEVQFQTEVEMIGLALHR------N 360
+LG GG+G VY G + + + VA+K ++ + GE+ T V M + L +
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 361 LLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLH 420
++RL + P+ +L+ + L D + L + + H
Sbjct: 118 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 174
Query: 421 EQCNPKIIHRDVKAANILLD-ESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYL 479
N ++HRD+K NIL+D E + DFG LL +D+ V T GT + PE++
Sbjct: 175 ---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPPEWI 228
Query: 480 STGQSSEKT-DVFGFGVLLLELITG 503
+ ++ V+ G+LL +++ G
Sbjct: 229 RYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 310 ILGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFT--GEVQFQTEVEMIGLALHR------N 360
+LG GG+G VY G + + + VA+K ++ + GE+ T V M + L +
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 361 LLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLH 420
++RL + P+ +L+ + L D + L + + H
Sbjct: 76 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 132
Query: 421 EQCNPKIIHRDVKAANILLD-ESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYL 479
N ++HRD+K NIL+D E + DFG LL +D+ V T GT + PE++
Sbjct: 133 ---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPPEWI 186
Query: 480 STGQSSEKT-DVFGFGVLLLELITG 503
+ ++ V+ G+LL +++ G
Sbjct: 187 RYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 114/266 (42%), Gaps = 43/266 (16%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVK--RLKDPNFTGEVQFQTEVEMIG-LALHRN-LLRLYG 366
+G GG V++ + + A+K L++ + ++ E+ + L H + ++RLY
Sbjct: 17 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 76
Query: 367 FCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLD-WNRRMHIALGTARGLLYLHEQCNP 425
+ +T + +Y M G++ L + K +D W R+ + + +H+
Sbjct: 77 YEITDQ---YIYMVMECGNID--LNSWLKKKKSIDPWERKSYWK-NMLEAVHTIHQHG-- 128
Query: 426 KIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVR-GTVGHIAPEYLSTGQS 484
I+H D+K AN L+ + ++ DFG+A + + V + GTV ++ PE + S
Sbjct: 129 -IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 186
Query: 485 SEKT-----------DVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLD 533
S + DV+ G +L + G+ I++ + LH
Sbjct: 187 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ---------QIINQISKLH------ 231
Query: 534 VLIDRDLKGSFDPTELEKMVQLALQC 559
+ID + + F P EK +Q L+C
Sbjct: 232 AIIDPNHEIEF-PDIPEKDLQDVLKC 256
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 99/230 (43%), Gaps = 25/230 (10%)
Query: 285 FDVGHLKRFSFRELQIATGNFSPKNILGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFT-- 341
F H+K E Q G +LG GG+G VY G + + + VA+K ++ +
Sbjct: 18 FQGPHMKEKEPLESQYQVGP-----LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW 72
Query: 342 GEVQFQTEVEMIGLALHR------NLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQ 395
GE+ T V M + L + ++RL + P+ +L+ + L D
Sbjct: 73 GELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQDLFDFIT 129
Query: 396 AKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLD-ESFEAVVGDFGLAK 454
+ L + + H N ++HRD+K NIL+D E + DFG
Sbjct: 130 ERGALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGA 186
Query: 455 LLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKT-DVFGFGVLLLELITG 503
LL +D+ V T GT + PE++ + ++ V+ G+LL +++ G
Sbjct: 187 LL--KDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 233
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 310 ILGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFT--GEVQFQTEVEMIGLALHR------N 360
+LG GG+G VY G + + + VA+K ++ + GE+ T V M + L +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 361 LLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLH 420
++RL + P+ +L+ + L D + L + + H
Sbjct: 104 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 160
Query: 421 EQCNPKIIHRDVKAANILLD-ESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYL 479
N ++HRD+K NIL+D E + DFG LL +D+ V T GT + PE++
Sbjct: 161 ---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPPEWI 214
Query: 480 STGQSSEKT-DVFGFGVLLLELITG 503
+ ++ V+ G+LL +++ G
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 310 ILGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFT--GEVQFQTEVEMIGLALHR------N 360
+LG GG+G VY G + + + VA+K ++ + GE+ T V M + L +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 361 LLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLH 420
++RL + P+ +L+ + L D + L + + H
Sbjct: 103 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 159
Query: 421 EQCNPKIIHRDVKAANILLD-ESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYL 479
N ++HRD+K NIL+D E + DFG LL +D+ V T GT + PE++
Sbjct: 160 ---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPPEWI 213
Query: 480 STGQSSEKT-DVFGFGVLLLELITG 503
+ ++ V+ G+LL +++ G
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 310 ILGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFT--GEVQFQTEVEMIGLALHR------N 360
+LG GG+G VY G + + + VA+K ++ + GE+ T V M + L +
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 361 LLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLH 420
++RL + P+ +L+ + L D + L + + H
Sbjct: 76 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 132
Query: 421 EQCNPKIIHRDVKAANILLD-ESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYL 479
N ++HRD+K NIL+D E + DFG LL +D+ V T GT + PE++
Sbjct: 133 ---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPPEWI 186
Query: 480 STGQSSEKT-DVFGFGVLLLELITG 503
+ ++ V+ G+LL +++ G
Sbjct: 187 RYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 114/266 (42%), Gaps = 43/266 (16%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVK--RLKDPNFTGEVQFQTEVEMIG-LALHRN-LLRLYG 366
+G GG V++ + + A+K L++ + ++ E+ + L H + ++RLY
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 367 FCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLD-WNRRMHIALGTARGLLYLHEQCNP 425
+ +T + +Y M G++ L + K +D W R+ + + +H+
Sbjct: 124 YEITDQ---YIYMVMECGNID--LNSWLKKKKSIDPWERKSYWK-NMLEAVHTIHQHG-- 175
Query: 426 KIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVR-GTVGHIAPEYLSTGQS 484
I+H D+K AN L+ + ++ DFG+A + + V + GTV ++ PE + S
Sbjct: 176 -IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 233
Query: 485 SEKT-----------DVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLD 533
S + DV+ G +L + G+ I++ + LH
Sbjct: 234 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ---------QIINQISKLH------ 278
Query: 534 VLIDRDLKGSFDPTELEKMVQLALQC 559
+ID + + F P EK +Q L+C
Sbjct: 279 AIIDPNHEIEF-PDIPEKDLQDVLKC 303
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 310 ILGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFT--GEVQFQTEVEMIGLALHR------N 360
+LG GG+G VY G + + + VA+K ++ + GE+ T V M + L +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 361 LLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLH 420
++RL + P+ +L+ + L D + L + + H
Sbjct: 103 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 159
Query: 421 EQCNPKIIHRDVKAANILLD-ESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYL 479
N ++HRD+K NIL+D E + DFG LL +D+ V T GT + PE++
Sbjct: 160 ---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPPEWI 213
Query: 480 STGQSSEKT-DVFGFGVLLLELITG 503
+ ++ V+ G+LL +++ G
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 310 ILGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFT--GEVQFQTEVEMIGLALHR------N 360
+LG GG+G VY G + + + VA+K ++ + GE+ T V M + L +
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 361 LLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLH 420
++RL + P+ +L+ + L D + L + + H
Sbjct: 90 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 146
Query: 421 EQCNPKIIHRDVKAANILLD-ESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYL 479
N ++HRD+K NIL+D E + DFG LL +D+ V T GT + PE++
Sbjct: 147 ---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPPEWI 200
Query: 480 STGQSSEKT-DVFGFGVLLLELITG 503
+ ++ V+ G+LL +++ G
Sbjct: 201 RYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 310 ILGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFT--GEVQFQTEVEMIGLALHR------N 360
+LG GG+G VY G + + + VA+K ++ + GE+ T V M + L +
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 361 LLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLH 420
++RL + P+ +L+ + L D + L + + H
Sbjct: 91 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 147
Query: 421 EQCNPKIIHRDVKAANILLD-ESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYL 479
N ++HRD+K NIL+D E + DFG LL +D+ V T GT + PE++
Sbjct: 148 ---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPPEWI 201
Query: 480 STGQSSEKT-DVFGFGVLLLELITG 503
+ ++ V+ G+LL +++ G
Sbjct: 202 RYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 310 ILGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFT--GEVQFQTEVEMIGLALHR------N 360
+LG GG+G VY G + + + VA+K ++ + GE+ T V M + L +
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 361 LLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLH 420
++RL + P+ +L+ + L D + L + + H
Sbjct: 75 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 131
Query: 421 EQCNPKIIHRDVKAANILLD-ESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYL 479
N ++HRD+K NIL+D E + DFG LL +D+ V T GT + PE++
Sbjct: 132 ---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPPEWI 185
Query: 480 STGQSSEKT-DVFGFGVLLLELITG 503
+ ++ V+ G+LL +++ G
Sbjct: 186 RYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 310 ILGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFT--GEVQFQTEVEMIGLALHR------N 360
+LG GG+G VY G + + + VA+K ++ + GE+ T V M + L +
Sbjct: 63 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 122
Query: 361 LLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLH 420
++RL + P+ +L+ + L D + L + + H
Sbjct: 123 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 179
Query: 421 EQCNPKIIHRDVKAANILLD-ESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYL 479
N ++HRD+K NIL+D E + DFG LL +D+ V T GT + PE++
Sbjct: 180 ---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPPEWI 233
Query: 480 STGQSSEKT-DVFGFGVLLLELITG 503
+ ++ V+ G+LL +++ G
Sbjct: 234 RYHRYHGRSAAVWSLGILLYDMVCG 258
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 310 ILGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFT--GEVQFQTEVEMIGLALHR------N 360
+LG GG+G VY G + + + VA+K ++ + GE+ T V M + L +
Sbjct: 50 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 109
Query: 361 LLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLH 420
++RL + P+ +L+ + L D + L + + H
Sbjct: 110 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 166
Query: 421 EQCNPKIIHRDVKAANILLD-ESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYL 479
N ++HRD+K NIL+D E + DFG LL +D+ V T GT + PE++
Sbjct: 167 ---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPPEWI 220
Query: 480 STGQSSEKT-DVFGFGVLLLELITG 503
+ ++ V+ G+LL +++ G
Sbjct: 221 RYHRYHGRSAAVWSLGILLYDMVCG 245
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 310 ILGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFT--GEVQFQTEVEMIGLALHR------N 360
+LG GG+G VY G + + + VA+K ++ + GE+ T V M + L +
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 361 LLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLH 420
++RL + P+ +L+ + L D + L + + H
Sbjct: 90 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 146
Query: 421 EQCNPKIIHRDVKAANILLD-ESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYL 479
N ++HRD+K NIL+D E + DFG LL +D+ V T GT + PE++
Sbjct: 147 ---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPPEWI 200
Query: 480 STGQSSEKT-DVFGFGVLLLELITG 503
+ ++ V+ G+LL +++ G
Sbjct: 201 RYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 310 ILGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFT--GEVQFQTEVEMIGLALHR------N 360
+LG GG+G VY G + + + VA+K ++ + GE+ T V M + L +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 361 LLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLH 420
++RL + P+ +L+ + L D + L + + H
Sbjct: 71 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 127
Query: 421 EQCNPKIIHRDVKAANILLD-ESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYL 479
N ++HRD+K NIL+D E + DFG LL +D+ V T GT + PE++
Sbjct: 128 ---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPPEWI 181
Query: 480 STGQSSEKT-DVFGFGVLLLELITG 503
+ ++ V+ G+LL +++ G
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 410 LGTA-RGLLYLHEQCNPKIIHRDVKAANILLD-ESFEAVVGDFGLAKLL--DRRDSHVTT 465
LG A GL YLH + +I+H DVKA N+LL + A + DFG A L D + T
Sbjct: 170 LGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLT 226
Query: 466 A--VRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITG 503
+ GT H+APE + K D++ ++L ++ G
Sbjct: 227 GDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 410 LGTA-RGLLYLHEQCNPKIIHRDVKAANILLD-ESFEAVVGDFGLAKLL--DRRDSHVTT 465
LG A GL YLH + +I+H DVKA N+LL + A + DFG A L D + T
Sbjct: 156 LGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLT 212
Query: 466 A--VRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITG 503
+ GT H+APE + K D++ ++L ++ G
Sbjct: 213 GDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 310 ILGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFT--GEVQFQTEVEMIGLALHR------N 360
+LG GG+G VY G + + + VA+K ++ + GE+ T V M + L +
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 361 LLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLH 420
++RL + P+ +L+ + L D + L + + H
Sbjct: 76 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 132
Query: 421 EQCNPKIIHRDVKAANILLD-ESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYL 479
N ++HRD+K NIL+D E + DFG LL +D+ V T GT + PE++
Sbjct: 133 ---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPPEWI 186
Query: 480 STGQSSEKT-DVFGFGVLLLELITG 503
+ ++ V+ G+LL +++ G
Sbjct: 187 RYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 310 ILGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFT--GEVQFQTEVEMIGLALHR------N 360
+LG GG+G VY G + + + VA+K ++ + GE+ T V M + L +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 361 LLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLH 420
++RL + P+ +L+ + L D + L + + H
Sbjct: 71 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 127
Query: 421 EQCNPKIIHRDVKAANILLD-ESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYL 479
N ++HRD+K NIL+D E + DFG LL +D+ V T GT + PE++
Sbjct: 128 ---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPPEWI 181
Query: 480 STGQSSEKT-DVFGFGVLLLELITG 503
+ ++ V+ G+LL +++ G
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 310 ILGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFT--GEVQFQTEVEMIGLALHR------N 360
+LG GG+G VY G + + + VA+K ++ + GE+ T V M + L +
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 361 LLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLH 420
++RL + P+ +L+ + L D + L + + H
Sbjct: 91 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 147
Query: 421 EQCNPKIIHRDVKAANILLD-ESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYL 479
N ++HRD+K NIL+D E + DFG LL +D+ V T GT + PE++
Sbjct: 148 ---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPPEWI 201
Query: 480 STGQSSEKT-DVFGFGVLLLELITG 503
+ ++ V+ G+LL +++ G
Sbjct: 202 RYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 310 ILGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFT--GEVQFQTEVEMIGLALHR------N 360
+LG GG+G VY G + + + VA+K ++ + GE+ T V M + L +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 361 LLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLH 420
++RL + P+ +L+ + L D + L + + H
Sbjct: 103 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 159
Query: 421 EQCNPKIIHRDVKAANILLD-ESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYL 479
N ++HRD+K NIL+D E + DFG LL +D+ V T GT + PE++
Sbjct: 160 ---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPPEWI 213
Query: 480 STGQSSEKT-DVFGFGVLLLELITG 503
+ ++ V+ G+LL +++ G
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 310 ILGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFT--GEVQFQTEVEMIGLALHR------N 360
+LG GG+G VY G + + + VA+K ++ + GE+ T V M + L +
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 361 LLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLH 420
++RL + P+ +L+ + L D + L + + H
Sbjct: 91 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 147
Query: 421 EQCNPKIIHRDVKAANILLD-ESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYL 479
N ++HRD+K NIL+D E + DFG LL +D+ V T GT + PE++
Sbjct: 148 ---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPPEWI 201
Query: 480 STGQSSEKT-DVFGFGVLLLELITG 503
+ ++ V+ G+LL +++ G
Sbjct: 202 RYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 310 ILGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFT--GEVQFQTEVEMIGLALHR------N 360
+LG GG+G VY G + + + VA+K ++ + GE+ T V M + L +
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 73
Query: 361 LLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLH 420
++RL + P+ +L+ + L D + L + + H
Sbjct: 74 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 130
Query: 421 EQCNPKIIHRDVKAANILLD-ESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYL 479
N ++HRD+K NIL+D E + DFG LL +D+ V T GT + PE++
Sbjct: 131 ---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPPEWI 184
Query: 480 STGQSSEKT-DVFGFGVLLLELITG 503
+ ++ V+ G+LL +++ G
Sbjct: 185 RYHRYHGRSAAVWSLGILLYDMVCG 209
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 410 LGTA-RGLLYLHEQCNPKIIHRDVKAANILLD-ESFEAVVGDFGLAKLL--DRRDSHVTT 465
LG A GL YLH + +I+H DVKA N+LL + A + DFG A L D + T
Sbjct: 172 LGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLT 228
Query: 466 A--VRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITG 503
+ GT H+APE + K D++ ++L ++ G
Sbjct: 229 GDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 114/266 (42%), Gaps = 43/266 (16%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVK--RLKDPNFTGEVQFQTEVEMIG-LALHRN-LLRLYG 366
+G GG V++ + + A+K L++ + ++ E+ + L H + ++RLY
Sbjct: 20 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 79
Query: 367 FCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLD-WNRRMHIALGTARGLLYLHEQCNP 425
+ +T + +Y M G++ L + K +D W R+ + + +H+
Sbjct: 80 YEITDQ---YIYMVMECGNID--LNSWLKKKKSIDPWERKSYWK-NMLEAVHTIHQHG-- 131
Query: 426 KIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVR-GTVGHIAPEYLSTGQS 484
I+H D+K AN L+ + ++ DFG+A + + V + GTV ++ PE + S
Sbjct: 132 -IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 189
Query: 485 SEKT-----------DVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLD 533
S + DV+ G +L + G+ I++ + LH
Sbjct: 190 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ---------QIINQISKLH------ 234
Query: 534 VLIDRDLKGSFDPTELEKMVQLALQC 559
+ID + + F P EK +Q L+C
Sbjct: 235 AIIDPNHEIEF-PDIPEKDLQDVLKC 259
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 310 ILGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFT--GEVQFQTEVEMIGLALHR------N 360
+LG GG+G VY G + + + VA+K ++ + GE+ T V M + L +
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 361 LLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLH 420
++RL + P+ +L+ + L D + L + + H
Sbjct: 118 VIRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 174
Query: 421 EQCNPKIIHRDVKAANILLD-ESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYL 479
N ++HRD+K NIL+D E + DFG LL +D+ V T GT + PE++
Sbjct: 175 ---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPPEWI 228
Query: 480 STGQSSEKT-DVFGFGVLLLELITG 503
+ ++ V+ G+LL +++ G
Sbjct: 229 RYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 88/207 (42%), Gaps = 22/207 (10%)
Query: 310 ILGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFTGEVQFQTEVEM-IGLAL---------H 358
+LG+GG+G V+ G L +R+ VA+K + G V + +AL H
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97
Query: 359 RNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLY 418
++RL + T E +LV + A L D K PL + +
Sbjct: 98 PGVIRLLDWFETQEGFMLV---LERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQH 154
Query: 419 LHEQCNPKIIHRDVKAANILLD-ESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPE 477
H + ++HRD+K NIL+D A + DFG LL T GT + PE
Sbjct: 155 CHSR---GVVHRDIKDENILIDLRRGCAKLIDFGSGALL---HDEPYTDFDGTRVYSPPE 208
Query: 478 YLSTGQ-SSEKTDVFGFGVLLLELITG 503
++S Q + V+ G+LL +++ G
Sbjct: 209 WISRHQYHALPATVWSLGILLYDMVCG 235
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 85/200 (42%), Gaps = 16/200 (8%)
Query: 311 LGQGGYGVVYKGCL--PNRMVVAVKRLKDPNFTGE--VQFQTEVEMIGLALHRNLLRLYG 366
LG+G + VV + C+ P A K + + + + E + L H N++RL+
Sbjct: 12 LGKGAFSVVRR-CMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 70
Query: 367 FCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPK 426
LV+ + G + + + R+ D + + L + H N
Sbjct: 71 SISEEGFHYLVFDLVTGGELFEDIV-AREYYSEADASHCIQQILESVN-----HCHLN-G 123
Query: 427 IIHRDVKAANILLDESFEAV---VGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQ 483
I+HRD+K N+LL + + DFGLA + + D GT G+++PE L
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLSPEVLRKDP 182
Query: 484 SSEKTDVFGFGVLLLELITG 503
+ D++ GV+L L+ G
Sbjct: 183 YGKPVDMWACGVILYILLVG 202
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 85/200 (42%), Gaps = 16/200 (8%)
Query: 311 LGQGGYGVVYKGCL--PNRMVVAVKRLKDPNFTGE--VQFQTEVEMIGLALHRNLLRLYG 366
LG+G + VV + C+ P A K + + + + E + L H N++RL+
Sbjct: 12 LGKGAFSVV-RRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 70
Query: 367 FCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPK 426
LV+ + G + + + R+ D + + L + H N
Sbjct: 71 SISEEGFHYLVFDLVTGGELFEDIV-AREYYSEADASHCIQQILESVN-----HCHLN-G 123
Query: 427 IIHRDVKAANILLDESFEAV---VGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQ 483
I+HRD+K N+LL + + DFGLA + + D GT G+++PE L
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLSPEVLRKDP 182
Query: 484 SSEKTDVFGFGVLLLELITG 503
+ D++ GV+L L+ G
Sbjct: 183 YGKPVDMWACGVILYILLVG 202
>pdb|3G3A|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|C Chain C, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|E Chain E, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|G Chain G, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
Length = 178
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
Query: 81 CSAEGFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDL 140
CS G V S+ S G T + + L++NQ++ P F L++L LDL
Sbjct: 15 CSCSGTTVDCSGKSLA-----SVPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDL 69
Query: 141 SNNQLVGEIPSSLGFLTHLTYLRLNNNKL 169
NNQL LT LT L LN+N+L
Sbjct: 70 DNNQLTVLPAGVFDKLTQLTQLSLNDNQL 98
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 31/60 (51%)
Query: 108 LTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRLNNN 167
LT L + L NNQL+ F L++L L L++NQL + L LT++ L NN
Sbjct: 61 LTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNN 120
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 113/266 (42%), Gaps = 43/266 (16%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVK--RLKDPNFTGEVQFQTEVEMIG-LALHRN-LLRLYG 366
+G GG V++ + + A+K L++ + ++ E+ + L H + ++RLY
Sbjct: 16 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 75
Query: 367 FCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLD-WNRRMHIALGTARGLLYLHEQCNP 425
+ +T + +Y M G++ L + K +D W R+ + L +H
Sbjct: 76 YEITDQ---YIYMVMECGNID--LNSWLKKKKSIDPWERKSY----WKNMLEAVHTIHQH 126
Query: 426 KIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVR-GTVGHIAPEYLSTGQS 484
I+H D+K AN L+ + ++ DFG+A + + V + GTV ++ PE + S
Sbjct: 127 GIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 185
Query: 485 SEKT-----------DVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLD 533
S + DV+ G +L + G+ I++ + LH
Sbjct: 186 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ---------QIINQISKLH------ 230
Query: 534 VLIDRDLKGSFDPTELEKMVQLALQC 559
+ID + + F P EK +Q L+C
Sbjct: 231 AIIDPNHEIEF-PDIPEKDLQDVLKC 255
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 21/131 (16%)
Query: 406 MHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFG-LAKLLDRRDSHVT 464
M IA+ + L Y +HRD+K NIL+D + + DFG KL++ +
Sbjct: 184 MVIAIDSVHQLHY---------VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSS 234
Query: 465 TAVRGTVGHIAPEYLST-----GQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMI 519
AV GT +I+PE L G+ + D + GV + E++ G+ + G I
Sbjct: 235 VAV-GTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 293
Query: 520 LDCVRTLHEER 530
++ H+ER
Sbjct: 294 MN-----HKER 299
>pdb|3G39|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor
Length = 170
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
Query: 81 CSAEGFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDL 140
CS G V S+ S G T + + L++NQ++ P F L++L LDL
Sbjct: 7 CSCSGTTVDCSGKSLA-----SVPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDL 61
Query: 141 SNNQLVGEIPSSLGFLTHLTYLRLNNNKL 169
NNQL LT LT L LN+N+L
Sbjct: 62 DNNQLTVLPAGVFDKLTQLTQLSLNDNQL 90
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 31/60 (51%)
Query: 108 LTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRLNNN 167
LT L + L NNQL+ F L++L L L++NQL + L LT++ L NN
Sbjct: 53 LTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNN 112
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 94/221 (42%), Gaps = 44/221 (19%)
Query: 304 NFSPKNILGQGGYGVVYKGC--LPNRMVVA--VKR--------LKDPNFTGEVQFQTEVE 351
+S + LG G +G V+ N+ VV +K+ ++DP G+V E+
Sbjct: 25 KYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKL-GKVTL--EIA 81
Query: 352 MIGLALHRNLLRLY------GFCMTPEERLLVYPYMPNGSVADCL----RDTRQAKPPLD 401
++ H N++++ GF E+ +GS D R R +P
Sbjct: 82 ILSRVEHANIIKVLDIFENQGFFQLVMEK--------HGSGLDLFAFIDRHPRLDEPLAS 133
Query: 402 WNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDS 461
+ R L +A G L L + IIHRD+K NI++ E F + DFG A L+R
Sbjct: 134 YIFRQ---LVSAVGYLRLKD-----IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKL 185
Query: 462 HVTTAVRGTVGHIAPEYL-STGQSSEKTDVFGFGVLLLELI 501
T GT+ + APE L + +++ GV L L+
Sbjct: 186 FYTFC--GTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLV 224
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 88/203 (43%), Gaps = 23/203 (11%)
Query: 311 LGQGGYGVVYKGCLPNRMV----VAVKRLKDP--NFTGEVQFQTEVEMIGLALHRNLLRL 364
+G G G+V C V VAVK+L P N T + E+ ++ H+N++ L
Sbjct: 32 IGSGAQGIV---CAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISL 88
Query: 365 YGFCMTPEERLL----VYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLH 420
TP++ L VY M C + LD R ++ G+ +LH
Sbjct: 89 LN-VFTPQKTLEEFQDVYLVMELMDANLC----QVIHMELDHERMSYLLYQMLCGIKHLH 143
Query: 421 EQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLS 480
+ IIHRD+K +NI++ + DFGLA+ + + T T + APE +
Sbjct: 144 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TACTNFMMTPYVVTRYYRAPEVIL 198
Query: 481 TGQSSEKTDVFGFGVLLLELITG 503
+ D++ G ++ EL+ G
Sbjct: 199 GMGYAANVDIWSVGCIMGELVKG 221
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 90/209 (43%), Gaps = 23/209 (11%)
Query: 309 NILGQGGYGVVYKGCLPNRMV---VAVKRLKDPNFTGEVQFQTE-----VEMIGLALHRN 360
++G+G + VV + C+ NR AVK + FT TE + + H +
Sbjct: 32 EVIGKGPFSVVRR-CI-NRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPH 89
Query: 361 LLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRM--HIALGTARGLLY 418
++ L + +V+ +M + C ++A ++ + H L Y
Sbjct: 90 IVELLETYSSDGMLYMVFEFMDGADL--CFEIVKRADAGFVYSEAVASHYMRQILEALRY 147
Query: 419 LHEQCNPKIIHRDVKAANILL---DESFEAVVGDFGLAKLLDRRDSHVTTAVR-GTVGHI 474
H+ IIHRDVK +LL + S +G FG+A L +S + R GT +
Sbjct: 148 CHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG--ESGLVAGGRVGTPHFM 202
Query: 475 APEYLSTGQSSEKTDVFGFGVLLLELITG 503
APE + + DV+G GV+L L++G
Sbjct: 203 APEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 90/209 (43%), Gaps = 23/209 (11%)
Query: 309 NILGQGGYGVVYKGCLPNRMV---VAVKRLKDPNFTGEVQFQTE-----VEMIGLALHRN 360
++G+G + VV + C+ NR AVK + FT TE + + H +
Sbjct: 30 EVIGKGPFSVVRR-CI-NRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPH 87
Query: 361 LLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRM--HIALGTARGLLY 418
++ L + +V+ +M + C ++A ++ + H L Y
Sbjct: 88 IVELLETYSSDGMLYMVFEFMDGADL--CFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 419 LHEQCNPKIIHRDVKAANILL---DESFEAVVGDFGLAKLLDRRDSHVTTAVR-GTVGHI 474
H+ IIHRDVK +LL + S +G FG+A L +S + R GT +
Sbjct: 146 CHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG--ESGLVAGGRVGTPHFM 200
Query: 475 APEYLSTGQSSEKTDVFGFGVLLLELITG 503
APE + + DV+G GV+L L++G
Sbjct: 201 APEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 95/221 (42%), Gaps = 27/221 (12%)
Query: 311 LGQGGYGVV---YKGCLPNRMVVAVKRLKDP--NFTGEVQFQTEVEMIGLALHRNLLRLY 365
+G G G+V Y L VA+K+L P N T + E+ ++ H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 366 GFCMTPEERLL----VYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHE 421
TP++ L VY M C + + LD R ++ G+ +LH
Sbjct: 90 N-VFTPQKSLEEFQDVYIVMELMDANLC----QVIQMELDHERMSYLLYQMLCGIKHLH- 143
Query: 422 QCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLST 481
+ IIHRD+K +NI++ + DFGLA+ S + T + APE +
Sbjct: 144 --SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMEPEVVTRYYRAPEVILG 199
Query: 482 GQSSEKTDVFGFGVLLLELI------TGQKALDVGNGQVQK 516
E D++ G ++ E++ G+ +D N +++
Sbjct: 200 MGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ 240
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTG-EVQFQTEVEMIGLALHRNLLRLYGFCM 369
+G+G YG VYK + LK TG + E+ ++ H N++ L +
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFL 88
Query: 370 TPEER--LLVYPYMPNG--SVADCLRDTRQAKPPLDWNRRMHIAL--GTARGLLYLHEQC 423
+ +R L++ Y + + R ++ K P+ R M +L G+ YLH
Sbjct: 89 SHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW 148
Query: 424 NPKIIHRDVKAANILL----DESFEAVVGDFGLAKLLDRRDSHVT--TAVRGTVGHIAPE 477
++HRD+K ANIL+ E + D G A+L + + V T + APE
Sbjct: 149 ---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPE 205
Query: 478 YLSTGQSSEKT-DVFGFGVLLLELITGQ 504
L + K D++ G + EL+T +
Sbjct: 206 LLLGARHYTKAIDIWAIGCIFAELLTSE 233
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 113/266 (42%), Gaps = 43/266 (16%)
Query: 311 LGQGGYGVVYKGCLPNRMVVAVK--RLKDPNFTGEVQFQTEVEMIG-LALHRN-LLRLYG 366
+G GG V++ + + A+K L++ + ++ E+ + L H + ++RLY
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 367 FCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLD-WNRRMHIALGTARGLLYLHEQCNP 425
+ +T + +Y M G++ L + K +D W R+ + + +H+
Sbjct: 124 YEITDQ---YIYMVMECGNID--LNSWLKKKKSIDPWERKSYWK-NMLEAVHTIHQHG-- 175
Query: 426 KIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVR-GTVGHIAPEYLSTGQS 484
I+H D+K AN L+ + ++ DFG+A + + V + G V ++ PE + S
Sbjct: 176 -IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSS 233
Query: 485 SEKT-----------DVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLD 533
S + DV+ G +L + G+ I++ + LH
Sbjct: 234 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ---------QIINQISKLH------ 278
Query: 534 VLIDRDLKGSFDPTELEKMVQLALQC 559
+ID + + F P EK +Q L+C
Sbjct: 279 AIIDPNHEIEF-PDIPEKDLQDVLKC 303
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 81/172 (47%), Gaps = 17/172 (9%)
Query: 303 GNFSPKNILGQGGYGVVY----KGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALH 358
N+ K+++G+G YG VY K N + V R+ + + + E+ ++
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFE-DLIDCKRILREITILNRLKS 84
Query: 359 RNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQA-KPPLDWNRRMHIALGTARGLL 417
++RLY + P++ L +AD D ++ K P+ + HI LL
Sbjct: 85 DYIIRLYDLII-PDDLLKFDELYIVLEIADS--DLKKLFKTPI-FLTEEHIKTILYNLLL 140
Query: 418 ---YLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLD-RRDSHVTT 465
++HE IIHRD+K AN LL++ V DFGLA+ ++ +D+++
Sbjct: 141 GENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVN 189
>pdb|3G3B|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|C Chain C, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|E Chain E, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|G Chain G, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
Length = 170
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
Query: 81 CSAEGFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDL 140
CS G V S+ S G T + + L++N+++ P F L++L LDL
Sbjct: 7 CSCSGTTVDCSGKSLA-----SVPTGIPTTTQVLYLYDNRITKLEPGVFDRLTQLTRLDL 61
Query: 141 SNNQLVGEIPSSLGFLTHLTYLRLNNNKL 169
NNQL LT LT L LN+N+L
Sbjct: 62 DNNQLTVLPAGVFDKLTQLTQLSLNDNQL 90
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 31/60 (51%)
Query: 108 LTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRLNNN 167
LT L + L NNQL+ F L++L L L++NQL + L LT++ L NN
Sbjct: 53 LTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLRSLTHIWLLNN 112
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 30/115 (26%)
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLD-------------RRDS 461
G+ Y+H + I+HRD+K AN L+++ V DFGLA+ +D R D
Sbjct: 168 GVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDD 224
Query: 462 -------HVTTAVRGTVGHI------APEYLSTGQS-SEKTDVFGFGVLLLELIT 502
H R GH+ APE + ++ +E DV+ G + EL+
Sbjct: 225 MNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 97/228 (42%), Gaps = 30/228 (13%)
Query: 304 NFSPKNILGQGGYGVV---YKGCLPNRMVVAVKRLKDP--NFTGEVQFQTEVEMIGLALH 358
N P +G G G+V Y L VA+K+L P N T + E+ ++ H
Sbjct: 28 NLKP---IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 359 RNLLRLYGFCMTPEERLL----VYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTAR 414
+N++ L TP++ L VY M C + + LD R ++
Sbjct: 83 KNIIGLLN-VFTPQKSLEEFQDVYIVMELMDANLC----QVIQMELDHERMSYLLYQMLC 137
Query: 415 GLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHI 474
G+ +LH + IIHRD+K +NI++ + DFGLA+ S + T +
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMEPEVVTRYYR 192
Query: 475 APEYLSTGQSSEKTDVFGFGVLLLELI------TGQKALDVGNGQVQK 516
APE + E D++ G ++ E++ G+ +D N +++
Sbjct: 193 APEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ 240
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 81/200 (40%), Gaps = 18/200 (9%)
Query: 311 LGQGGYGVVYKGC-LPNRMVVAVKRLKDPNFTGEVQFQT--EVEMIGLALHRNLLRLYGF 367
LG+G YG VYK VA+KR++ + V EV ++ HRN++ L
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSV 101
Query: 368 CMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKI 427
L++ Y N L+ P + G+ + H + +
Sbjct: 102 IHHNHRLHLIFEYAEND-----LKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSR---RC 153
Query: 428 IHRDVKAANILL---DESFEAV--VGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEY-LST 481
+HRD+K N+LL D S V +GDFGLA+ T + T+ + PE L +
Sbjct: 154 LHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEII-TLWYRPPEILLGS 212
Query: 482 GQSSEKTDVFGFGVLLLELI 501
S D++ + E++
Sbjct: 213 RHYSTSVDIWSIACIWAEML 232
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 91/213 (42%), Gaps = 20/213 (9%)
Query: 303 GNFSPKNILGQGGYGVVYK----GCLPNRMVVAVKRLKD---PNFTGEVQFQTEVEMIGL 355
G + ++LG+G YG V + L R V +K+ K PN GE + E++++
Sbjct: 5 GKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPN--GEANVKKEIQLLRR 62
Query: 356 ALHRNLLRLYGFCMTPEER--LLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTA 413
H+N+++L E++ +V Y G + + L + + P+ L
Sbjct: 63 LRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQL--I 119
Query: 414 RGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGH 473
GL YLH Q I+H+D+K N+LL + G+A+ L + T
Sbjct: 120 DGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPA 176
Query: 474 IAPEYLSTGQ---SSEKTDVFGFGVLLLELITG 503
P ++ G S K D++ GV L + TG
Sbjct: 177 FQPPEIANGLDTFSGFKVDIWSAGVTLYNITTG 209
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 45/108 (41%), Gaps = 8/108 (7%)
Query: 408 IALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVV---GDFGLAKLLDRRDSHVT 464
I + YLH + I HRDVK N+L + DFG AK +S T
Sbjct: 128 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT 184
Query: 465 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNG 512
T ++APE L + + D++ GV++ L+ G +G
Sbjct: 185 PCY--TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG 230
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 45/108 (41%), Gaps = 8/108 (7%)
Query: 408 IALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVV---GDFGLAKLLDRRDSHVT 464
I + YLH + I HRDVK N+L + DFG AK +S T
Sbjct: 127 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT 183
Query: 465 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNG 512
T ++APE L + + D++ GV++ L+ G +G
Sbjct: 184 PCY--TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG 229
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 45/108 (41%), Gaps = 8/108 (7%)
Query: 408 IALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVV---GDFGLAKLLDRRDSHVT 464
I + YLH + I HRDVK N+L + DFG AK +S T
Sbjct: 126 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT 182
Query: 465 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNG 512
T ++APE L + + D++ GV++ L+ G +G
Sbjct: 183 PCY--TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG 228
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 12/105 (11%)
Query: 415 GLLYLHEQCNPKIIHRDVKAANILL------DESFEAVVGDFGLAKLLDRRDSHVTTAVR 468
GL Y+H +C IIH D+K N+L+ + + + D G A D H T +++
Sbjct: 143 GLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWY---DEHYTNSIQ 197
Query: 469 GTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQ 513
T + +PE L D++ L+ ELITG + G
Sbjct: 198 -TREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGH 241
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 45/108 (41%), Gaps = 8/108 (7%)
Query: 408 IALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVV---GDFGLAKLLDRRDSHVT 464
I + YLH + I HRDVK N+L + DFG AK +S T
Sbjct: 121 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT 177
Query: 465 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNG 512
T ++APE L + + D++ GV++ L+ G +G
Sbjct: 178 PCY--TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG 223
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 12/105 (11%)
Query: 415 GLLYLHEQCNPKIIHRDVKAANILL------DESFEAVVGDFGLAKLLDRRDSHVTTAVR 468
GL Y+H +C IIH D+K N+L+ + + + D G A D H T +++
Sbjct: 143 GLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWY---DEHYTNSIQ 197
Query: 469 GTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQ 513
T + +PE L D++ L+ ELITG + G
Sbjct: 198 -TREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGH 241
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 45/108 (41%), Gaps = 8/108 (7%)
Query: 408 IALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVV---GDFGLAKLLDRRDSHVT 464
I + YLH + I HRDVK N+L + DFG AK +S T
Sbjct: 120 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT 176
Query: 465 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNG 512
T ++APE L + + D++ GV++ L+ G +G
Sbjct: 177 PCY--TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG 222
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 45/108 (41%), Gaps = 8/108 (7%)
Query: 408 IALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVV---GDFGLAKLLDRRDSHVT 464
I + YLH + I HRDVK N+L + DFG AK +S T
Sbjct: 136 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT 192
Query: 465 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNG 512
T ++APE L + + D++ GV++ L+ G +G
Sbjct: 193 PCY--TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG 238
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 45/108 (41%), Gaps = 8/108 (7%)
Query: 408 IALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVV---GDFGLAKLLDRRDSHVT 464
I + YLH + I HRDVK N+L + DFG AK +S T
Sbjct: 122 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT 178
Query: 465 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNG 512
T ++APE L + + D++ GV++ L+ G +G
Sbjct: 179 PCY--TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG 224
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 8/99 (8%)
Query: 408 IALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVV---GDFGLAKLLDRRDSHVT 464
I + YLH + I HRDVK N+L + DFG AK +S T
Sbjct: 166 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT 222
Query: 465 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITG 503
T ++APE L + + D++ GV++ L+ G
Sbjct: 223 PCY--TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 259
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 13/163 (7%)
Query: 345 QFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNR 404
+ + EV ++ LH N++ L+ + +L+ + G + D L K L
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL----AQKESLSEEE 116
Query: 405 RMHIALGTARGLLYLHEQCNPKIIHRDVKAANI-LLDESF---EAVVGDFGLAKLLDRRD 460
G+ YLH KI H D+K NI LLD++ + DFGLA ++ D
Sbjct: 117 ATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE--D 171
Query: 461 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITG 503
+ GT +APE ++ + D++ GV+ L++G
Sbjct: 172 GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 72/163 (44%), Gaps = 13/163 (7%)
Query: 345 QFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNR 404
+ + EV ++ LH N++ L+ + +L+ + G + D L K L
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL----AQKESLSEEE 116
Query: 405 RMHIALGTARGLLYLHEQCNPKIIHRDVKAANI-LLDESF---EAVVGDFGLAKLLDRRD 460
G+ YLH + KI H D+K NI LLD++ + DFGLA ++ D
Sbjct: 117 ATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE--D 171
Query: 461 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITG 503
+ GT +APE ++ + D++ GV+ L++G
Sbjct: 172 GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 13/163 (7%)
Query: 345 QFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNR 404
+ + EV ++ LH N++ L+ + +L+ + G + D L K L
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL----AQKESLSEEE 116
Query: 405 RMHIALGTARGLLYLHEQCNPKIIHRDVKAANI-LLDESF---EAVVGDFGLAKLLDRRD 460
G+ YLH KI H D+K NI LLD++ + DFGLA ++ D
Sbjct: 117 ATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE--D 171
Query: 461 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITG 503
+ GT +APE ++ + D++ GV+ L++G
Sbjct: 172 GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 8/99 (8%)
Query: 408 IALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVV---GDFGLAKLLDRRDSHVT 464
I + YLH + I HRDVK N+L + DFG AK +S T
Sbjct: 172 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT 228
Query: 465 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITG 503
T ++APE L + + D++ GV++ L+ G
Sbjct: 229 PCY--TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 265
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 72/163 (44%), Gaps = 13/163 (7%)
Query: 345 QFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNR 404
+ + EV ++ LH N++ L+ + +L+ + G + D L K L
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL----AQKESLSEEE 116
Query: 405 RMHIALGTARGLLYLHEQCNPKIIHRDVKAANI-LLDESF---EAVVGDFGLAKLLDRRD 460
G+ YLH + KI H D+K NI LLD++ + DFGLA ++ D
Sbjct: 117 ATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE--D 171
Query: 461 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITG 503
+ GT +APE ++ + D++ GV+ L++G
Sbjct: 172 GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 8/99 (8%)
Query: 408 IALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVV---GDFGLAKLLDRRDSHVT 464
I + YLH + I HRDVK N+L + DFG AK +S T
Sbjct: 122 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT 178
Query: 465 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITG 503
T ++APE L + + D++ GV++ L+ G
Sbjct: 179 PCY--TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 215
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 12/113 (10%)
Query: 410 LGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVV---GDFGLAKLLDRRDSHVTTA 466
+GTA L+ H I HRDVK N+L + V DFG AK + + + T
Sbjct: 137 IGTAIQFLHSH-----NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK--ETTQNALQTP 189
Query: 467 VRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQ-VQKGM 518
T ++APE L + + D++ GV++ L+ G GQ + GM
Sbjct: 190 CY-TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGM 241
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,085,303
Number of Sequences: 62578
Number of extensions: 672372
Number of successful extensions: 4007
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 870
Number of HSP's successfully gapped in prelim test: 261
Number of HSP's that attempted gapping in prelim test: 1623
Number of HSP's gapped (non-prelim): 1320
length of query: 626
length of database: 14,973,337
effective HSP length: 105
effective length of query: 521
effective length of database: 8,402,647
effective search space: 4377779087
effective search space used: 4377779087
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)