Query 006907
Match_columns 626
No_of_seqs 637 out of 5358
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 12:07:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006907.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006907hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asz_A BDNF/NT-3 growth factor 100.0 3.5E-55 1.2E-59 446.1 16.8 260 303-582 13-289 (299)
2 4aoj_A High affinity nerve gro 100.0 2.2E-54 7.4E-59 446.3 20.0 260 303-582 41-319 (329)
3 4gt4_A Tyrosine-protein kinase 100.0 2E-54 7E-59 442.3 18.0 257 304-580 27-304 (308)
4 3omv_A RAF proto-oncogene seri 100.0 4.5E-54 1.5E-58 438.0 19.4 264 301-585 34-303 (307)
5 4ase_A Vascular endothelial gr 100.0 1.3E-52 4.4E-57 436.5 15.2 271 294-583 55-348 (353)
6 4fih_A Serine/threonine-protei 100.0 3.6E-52 1.2E-56 429.4 18.2 250 303-576 74-324 (346)
7 4b9d_A Serine/threonine-protei 100.0 3E-52 1E-56 430.6 16.4 250 303-575 24-276 (350)
8 4g3f_A NF-kappa-beta-inducing 100.0 5.8E-52 2E-56 426.6 17.8 253 303-582 58-316 (336)
9 4aw0_A HPDK1, 3-phosphoinositi 100.0 4.4E-52 1.5E-56 422.4 14.4 249 303-576 32-285 (311)
10 3hmm_A TGF-beta receptor type- 100.0 3.5E-51 1.2E-55 419.0 19.4 267 304-582 4-297 (303)
11 4fie_A Serine/threonine-protei 100.0 2.9E-50 9.8E-55 425.3 25.0 250 303-576 151-401 (423)
12 3hyh_A Carbon catabolite-derep 100.0 1.8E-50 6.3E-55 404.9 20.1 246 303-576 13-263 (275)
13 3fpq_A Serine/threonine-protei 100.0 5.8E-50 2E-54 404.8 23.0 247 306-576 29-283 (290)
14 3ubd_A Ribosomal protein S6 ki 100.0 5.1E-51 1.7E-55 414.6 11.3 247 303-575 24-281 (304)
15 3uim_A Brassinosteroid insensi 100.0 7.7E-48 2.6E-52 399.4 23.2 297 284-580 11-309 (326)
16 4g31_A Eukaryotic translation 100.0 2.8E-48 9.5E-53 395.8 18.6 250 304-576 6-280 (299)
17 4b99_A Mitogen-activated prote 100.0 4.9E-48 1.7E-52 408.9 14.0 266 303-576 54-345 (398)
18 2qkw_B Protein kinase; three-h 100.0 3.5E-46 1.2E-50 386.1 23.4 284 295-582 31-315 (321)
19 4f9c_A Cell division cycle 7-r 100.0 3.1E-46 1.1E-50 390.9 20.4 264 301-576 19-353 (361)
20 3v5w_A G-protein coupled recep 100.0 4.5E-45 1.6E-49 402.4 19.5 249 302-575 188-449 (689)
21 3uto_A Twitchin; kinase, muscl 100.0 4.3E-45 1.5E-49 404.9 18.0 252 303-576 157-411 (573)
22 3p86_A Serine/threonine-protei 100.0 3.6E-44 1.2E-48 369.1 15.6 269 297-587 31-303 (309)
23 2nru_A Interleukin-1 receptor- 100.0 2.5E-42 8.7E-47 354.6 28.7 283 289-581 11-305 (307)
24 3s95_A LIMK-1, LIM domain kina 100.0 1.8E-43 6.1E-48 363.9 19.5 260 303-585 10-285 (310)
25 3fxz_A Serine/threonine-protei 100.0 3.6E-43 1.2E-47 359.5 21.2 251 302-576 19-270 (297)
26 2psq_A Fibroblast growth facto 100.0 3E-43 1E-47 371.4 20.4 263 302-584 80-366 (370)
27 4hcu_A Tyrosine-protein kinase 100.0 3E-43 1E-47 354.5 17.4 257 302-582 9-266 (269)
28 3sxs_A Cytoplasmic tyrosine-pr 100.0 7.3E-43 2.5E-47 351.4 19.7 258 302-583 7-265 (268)
29 3kul_A Ephrin type-A receptor 100.0 4.4E-43 1.5E-47 363.6 18.3 259 302-583 48-314 (325)
30 3zgw_A Maternal embryonic leuc 100.0 4.6E-43 1.6E-47 366.0 18.3 250 302-576 9-261 (347)
31 2c30_A Serine/threonine-protei 100.0 6.8E-42 2.3E-46 354.1 26.2 262 291-576 23-295 (321)
32 3soc_A Activin receptor type-2 100.0 2.2E-43 7.6E-48 365.4 15.0 270 301-582 22-318 (322)
33 3fe3_A MAP/microtubule affinit 100.0 1.1E-42 3.7E-47 360.8 18.3 248 302-576 14-265 (328)
34 2qol_A Ephrin receptor; recept 100.0 1.1E-42 3.6E-47 367.5 18.5 259 302-583 44-310 (373)
35 3vhe_A Vascular endothelial gr 100.0 4.1E-43 1.4E-47 368.7 15.0 272 293-583 12-356 (359)
36 3gen_A Tyrosine-protein kinase 100.0 1.1E-42 3.8E-47 353.0 17.2 258 301-582 22-280 (283)
37 4fr4_A YANK1, serine/threonine 100.0 2.6E-42 8.9E-47 364.7 20.7 291 303-624 15-314 (384)
38 1qcf_A Haematopoetic cell kina 100.0 3E-43 1E-47 381.7 13.5 262 298-583 183-445 (454)
39 3niz_A Rhodanese family protei 100.0 2.2E-42 7.7E-47 356.0 19.3 267 302-576 20-301 (311)
40 4eqm_A Protein kinase; transfe 100.0 2.2E-42 7.5E-47 353.2 18.8 262 302-583 10-276 (294)
41 1luf_A Muscle-specific tyrosin 100.0 1.4E-42 4.7E-47 362.3 17.0 268 298-585 42-338 (343)
42 4euu_A Serine/threonine-protei 100.0 2E-41 6.9E-46 350.1 25.6 273 303-581 9-308 (319)
43 1ob3_A PFPK5, cell division co 100.0 2.5E-42 8.5E-47 351.6 18.4 266 303-576 2-281 (288)
44 1opk_A P150, C-ABL, proto-onco 100.0 1.8E-42 6.2E-47 379.3 18.4 261 300-583 217-479 (495)
45 2ivs_A Proto-oncogene tyrosine 100.0 9.7E-43 3.3E-47 358.7 15.0 264 300-583 20-312 (314)
46 4aw2_A Serine/threonine-protei 100.0 2.2E-42 7.5E-47 371.3 18.3 264 294-576 65-339 (437)
47 1o6l_A RAC-beta serine/threoni 100.0 4.1E-42 1.4E-46 357.6 19.9 248 303-576 5-261 (337)
48 3cbl_A C-FES, proto-oncogene t 100.0 7.4E-43 2.5E-47 369.5 14.4 259 301-582 112-374 (377)
49 3ugc_A Tyrosine-protein kinase 100.0 1.8E-42 6.1E-47 353.8 16.4 267 302-583 9-292 (295)
50 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 2.4E-42 8.1E-47 374.3 18.2 261 300-584 181-442 (452)
51 2pmi_A Negative RE, cyclin-dep 100.0 6.5E-42 2.2E-46 353.5 20.2 270 302-576 4-294 (317)
52 1mp8_A Focal adhesion kinase 1 100.0 3.4E-42 1.2E-46 349.2 17.6 259 301-583 13-277 (281)
53 3kfa_A Tyrosine-protein kinase 100.0 1.6E-42 5.5E-47 352.6 15.2 262 299-583 9-272 (288)
54 3tt0_A Basic fibroblast growth 100.0 4.5E-42 1.5E-46 364.2 19.1 263 301-583 67-353 (382)
55 3v8s_A RHO-associated protein 100.0 3.4E-42 1.2E-46 367.0 18.0 260 295-576 61-330 (410)
56 3q4u_A Activin receptor type-1 100.0 6.1E-42 2.1E-46 350.5 19.2 261 302-580 7-300 (301)
57 3qup_A Tyrosine-protein kinase 100.0 2.1E-42 7.3E-47 357.9 15.9 268 298-585 18-301 (323)
58 1rjb_A FL cytokine receptor; k 100.0 5.3E-42 1.8E-46 358.2 18.7 271 299-588 41-340 (344)
59 3l9p_A Anaplastic lymphoma kin 100.0 2.4E-42 8.3E-47 364.1 15.8 262 302-583 70-346 (367)
60 3txo_A PKC-L, NPKC-ETA, protei 100.0 3E-42 1E-46 360.9 16.2 250 300-575 20-280 (353)
61 3lb7_A RAF proto-oncogene seri 100.0 3.8E-41 1.3E-45 346.2 24.1 264 300-584 33-302 (307)
62 3t9t_A Tyrosine-protein kinase 100.0 3.8E-42 1.3E-46 345.8 16.1 257 302-582 7-264 (267)
63 1t46_A HOMO sapiens V-KIT hard 100.0 7.1E-42 2.4E-46 352.0 18.1 265 300-583 20-308 (313)
64 2izr_A Casein kinase I isoform 100.0 2.9E-41 9.9E-46 350.7 22.5 262 302-583 8-282 (330)
65 3poz_A Epidermal growth factor 100.0 5.9E-42 2E-46 355.5 17.2 257 303-583 15-279 (327)
66 1k9a_A Carboxyl-terminal SRC k 100.0 1.8E-41 6.1E-46 367.2 21.3 254 300-582 190-445 (450)
67 1qpc_A LCK kinase; alpha beta 100.0 3.5E-42 1.2E-46 348.6 14.7 260 300-583 10-270 (279)
68 2yab_A Death-associated protei 100.0 3.6E-41 1.2E-45 353.7 22.8 248 302-576 11-273 (361)
69 3dtc_A Mitogen-activated prote 100.0 9E-42 3.1E-46 343.9 17.4 254 302-580 6-271 (271)
70 1tki_A Titin; serine kinase, m 100.0 7.2E-42 2.4E-46 353.8 16.9 252 302-576 4-258 (321)
71 1csn_A Casein kinase-1; phosph 100.0 3.4E-41 1.2E-45 344.5 21.2 263 302-583 9-284 (298)
72 4dc2_A Protein kinase C IOTA t 100.0 2.3E-41 8E-46 358.6 20.6 256 302-575 51-318 (396)
73 4f0f_A Serine/threonine-protei 100.0 3.2E-41 1.1E-45 343.0 20.6 253 302-580 18-287 (287)
74 2vd5_A DMPK protein; serine/th 100.0 1.4E-41 4.7E-46 362.5 18.1 264 293-576 51-328 (412)
75 3kmu_A ILK, integrin-linked ki 100.0 1.8E-41 6.3E-46 341.2 17.4 252 303-582 10-270 (271)
76 2eva_A TAK1 kinase - TAB1 chim 100.0 6.3E-41 2.2E-45 344.6 21.4 260 303-587 8-268 (307)
77 3tki_A Serine/threonine-protei 100.0 1E-41 3.4E-46 353.1 15.5 252 303-576 7-262 (323)
78 4e5w_A Tyrosine-protein kinase 100.0 7.3E-42 2.5E-46 350.3 14.3 263 303-581 21-301 (302)
79 2i1m_A Macrophage colony-stimu 100.0 5.9E-42 2E-46 356.2 13.8 269 297-584 40-328 (333)
80 3cc6_A Protein tyrosine kinase 100.0 2.1E-41 7.3E-46 343.3 17.5 259 301-583 10-274 (281)
81 3o0g_A Cell division protein k 100.0 4.3E-41 1.5E-45 343.1 19.8 266 303-576 2-283 (292)
82 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.7E-41 5.7E-46 352.7 17.0 246 303-576 9-259 (336)
83 3c0i_A Peripheral plasma membr 100.0 4.3E-41 1.5E-45 352.5 20.1 254 303-575 24-286 (351)
84 3kex_A Receptor tyrosine-prote 100.0 2E-41 6.8E-46 351.2 17.4 259 303-585 13-279 (325)
85 3a62_A Ribosomal protein S6 ki 100.0 2.3E-41 8E-46 351.0 17.9 249 302-576 16-277 (327)
86 1p4o_A Insulin-like growth fac 100.0 1.7E-41 5.9E-46 350.9 16.8 274 295-588 17-305 (322)
87 1xjd_A Protein kinase C, theta 100.0 1.2E-41 4.2E-46 355.0 15.7 251 299-575 13-269 (345)
88 2y0a_A Death-associated protei 100.0 2E-41 7E-46 351.2 17.3 251 303-576 11-272 (326)
89 3g33_A Cell division protein k 100.0 6.7E-41 2.3E-45 344.4 20.9 269 300-576 6-297 (308)
90 1fot_A TPK1 delta, CAMP-depend 100.0 3.2E-41 1.1E-45 348.2 18.5 245 303-576 6-259 (318)
91 3lxl_A Tyrosine-protein kinase 100.0 7E-42 2.4E-46 354.8 13.6 274 303-584 23-305 (327)
92 3soa_A Calcium/calmodulin-depe 100.0 4.9E-41 1.7E-45 361.9 20.6 254 301-576 9-268 (444)
93 2zv2_A Calcium/calmodulin-depe 100.0 2.7E-41 9.1E-46 345.7 17.6 250 302-576 12-293 (298)
94 2pvf_A Fibroblast growth facto 100.0 3E-41 1E-45 351.2 18.3 265 301-585 33-321 (334)
95 2buj_A Serine/threonine-protei 100.0 1.5E-41 5.1E-46 350.5 15.9 266 302-585 28-309 (317)
96 3brb_A Proto-oncogene tyrosine 100.0 2.3E-41 7.9E-46 348.6 17.1 270 296-585 27-311 (313)
97 2h8h_A Proto-oncogene tyrosine 100.0 2.9E-42 1E-46 381.1 11.1 263 298-584 262-525 (535)
98 4fvq_A Tyrosine-protein kinase 100.0 7.6E-42 2.6E-46 347.8 13.1 255 302-585 7-278 (289)
99 1kob_A Twitchin; kinase, intra 100.0 4E-41 1.4E-45 356.5 19.1 253 302-576 50-305 (387)
100 3lxp_A Non-receptor tyrosine-p 100.0 1.1E-41 3.9E-46 351.9 14.6 272 305-586 33-314 (318)
101 1xbb_A Tyrosine-protein kinase 100.0 1.5E-41 5.2E-46 346.3 15.2 265 301-590 14-287 (291)
102 2xir_A Vascular endothelial gr 100.0 1.6E-41 5.5E-46 349.9 15.5 272 293-583 17-311 (316)
103 3mtl_A Cell division protein k 100.0 1.1E-41 3.6E-46 353.1 14.1 266 303-576 2-282 (324)
104 2wqm_A Serine/threonine-protei 100.0 3.4E-41 1.2E-45 346.8 17.7 268 303-588 32-303 (310)
105 1rdq_E PKA C-alpha, CAMP-depen 100.0 4.9E-41 1.7E-45 351.4 19.1 245 303-576 41-294 (350)
106 3op5_A Serine/threonine-protei 100.0 3.4E-41 1.2E-45 355.1 17.9 269 301-583 33-330 (364)
107 3llt_A Serine/threonine kinase 100.0 4.1E-41 1.4E-45 353.8 18.5 278 288-576 20-356 (360)
108 1u59_A Tyrosine-protein kinase 100.0 6.3E-41 2.1E-45 341.0 19.1 262 303-588 9-278 (287)
109 3a8x_A Protein kinase C IOTA t 100.0 1.2E-40 4.2E-45 347.8 21.6 255 303-575 9-275 (345)
110 2i0e_A Protein kinase C-beta I 100.0 4.3E-41 1.5E-45 352.0 18.2 251 300-576 17-277 (353)
111 3qd2_B Eukaryotic translation 100.0 3.5E-41 1.2E-45 349.6 17.3 251 303-576 6-326 (332)
112 2bdw_A Hypothetical protein K1 100.0 3E-41 1E-45 355.0 16.8 253 301-576 27-285 (362)
113 3og7_A AKAP9-BRAF fusion prote 100.0 1.6E-40 5.4E-45 338.5 21.6 263 299-582 20-288 (289)
114 2h34_A Serine/threonine-protei 100.0 2.4E-40 8.2E-45 340.5 22.7 264 302-587 33-301 (309)
115 3uc3_A Serine/threonine-protei 100.0 1.3E-40 4.3E-45 350.1 21.1 253 302-576 19-275 (361)
116 4eut_A Serine/threonine-protei 100.0 7.5E-41 2.6E-45 356.5 19.5 275 303-583 9-310 (396)
117 2x4f_A Myosin light chain kina 100.0 2.6E-41 8.9E-46 356.8 15.7 247 308-576 94-343 (373)
118 3ork_A Serine/threonine protei 100.0 6.6E-41 2.3E-45 345.0 18.2 258 302-580 11-279 (311)
119 3lzb_A Epidermal growth factor 100.0 8.1E-41 2.8E-45 346.9 19.0 259 302-584 14-280 (327)
120 4hgt_A Casein kinase I isoform 100.0 2.9E-40 9.8E-45 337.1 22.0 264 301-583 7-281 (296)
121 3p1a_A MYT1 kinase, membrane-a 100.0 4E-41 1.4E-45 346.7 15.8 246 302-576 56-305 (311)
122 4agu_A Cyclin-dependent kinase 100.0 8.6E-41 2.9E-45 343.9 18.2 266 303-576 3-285 (311)
123 1mqb_A Ephrin type-A receptor 100.0 1.4E-40 4.8E-45 346.0 19.9 259 302-583 43-310 (333)
124 3dbq_A Dual specificity protei 100.0 6.1E-41 2.1E-45 350.2 16.9 251 302-576 8-274 (343)
125 2ozo_A Tyrosine-protein kinase 100.0 1.3E-40 4.3E-45 373.4 20.4 257 304-584 336-600 (613)
126 3fdn_A Serine/threonine-protei 100.0 7.7E-41 2.6E-45 338.8 16.8 247 302-576 8-258 (279)
127 3c1x_A Hepatocyte growth facto 100.0 5.8E-41 2E-45 354.0 16.5 261 304-587 90-360 (373)
128 2r5t_A Serine/threonine-protei 100.0 4.7E-41 1.6E-45 354.2 15.6 247 303-575 38-289 (373)
129 3kn6_A Ribosomal protein S6 ki 100.0 1.1E-40 3.8E-45 345.5 18.0 251 308-576 16-271 (325)
130 3uzp_A CKI-delta, CKID, casein 100.0 4.9E-40 1.7E-44 335.6 22.4 263 302-583 8-281 (296)
131 3gxj_A TGF-beta receptor type- 100.0 3.8E-42 1.3E-46 352.3 6.7 258 302-583 2-298 (303)
132 4ejn_A RAC-alpha serine/threon 100.0 3.6E-41 1.2E-45 364.7 14.6 249 302-576 147-405 (446)
133 3gni_B Strad alpha; kinase fol 100.0 1.7E-40 5.9E-45 352.9 19.6 270 302-576 24-334 (389)
134 3mdy_A Bone morphogenetic prot 100.0 5.7E-40 2E-44 341.5 23.1 268 296-583 30-332 (337)
135 3f66_A Hepatocyte growth facto 100.0 1.5E-40 5E-45 340.0 18.3 260 303-585 25-294 (298)
136 3pls_A Macrophage-stimulating 100.0 1.8E-40 6.3E-45 339.0 18.9 260 305-586 23-291 (298)
137 2eue_A Carbon catabolite derep 100.0 1.8E-40 6.2E-45 335.3 18.5 246 303-576 13-263 (275)
138 3g2f_A Bone morphogenetic prot 100.0 4.9E-41 1.7E-45 349.6 14.6 276 301-587 11-323 (336)
139 3oz6_A Mitogen-activated prote 100.0 9.2E-41 3.1E-45 354.9 17.0 268 300-576 6-329 (388)
140 3is5_A Calcium-dependent prote 100.0 4.3E-40 1.5E-44 334.6 21.1 253 303-576 22-279 (285)
141 3gbz_A Kinase, CMGC CDK; ssgci 100.0 6.8E-41 2.3E-45 347.8 15.5 267 301-576 32-319 (329)
142 1vzo_A Ribosomal protein S6 ki 100.0 6.4E-41 2.2E-45 351.7 15.3 254 303-577 54-323 (355)
143 3f3z_A Calcium/calmodulin-depe 100.0 3.3E-40 1.1E-44 333.7 19.5 247 302-576 8-262 (277)
144 3c4z_A Rhodopsin kinase; Ser/T 100.0 2.6E-40 8.8E-45 362.9 20.2 256 302-575 184-448 (543)
145 2w5a_A Serine/threonine-protei 100.0 5.2E-41 1.8E-45 339.8 13.6 256 303-579 6-271 (279)
146 2v62_A Serine/threonine-protei 100.0 1.4E-40 4.9E-45 347.7 17.4 267 302-583 36-329 (345)
147 3e7e_A HBUB1, BUB1A, mitotic c 100.0 3.9E-40 1.3E-44 347.1 20.8 257 299-583 61-340 (365)
148 3eb0_A Putative uncharacterize 100.0 6.6E-41 2.3E-45 355.4 14.9 268 299-576 3-322 (383)
149 3hko_A Calcium/calmodulin-depe 100.0 1E-40 3.5E-45 348.5 16.0 261 299-576 22-331 (345)
150 1fvr_A Tyrosine-protein kinase 100.0 1.1E-40 3.9E-45 345.7 16.3 259 303-583 25-301 (327)
151 3cok_A Serine/threonine-protei 100.0 1.4E-40 4.8E-45 336.6 16.3 249 303-576 11-263 (278)
152 2w1i_A JAK2; chromosomal rearr 100.0 2E-40 6.7E-45 343.8 17.8 267 302-583 40-323 (326)
153 2acx_A G protein-coupled recep 100.0 1.8E-40 6E-45 365.1 18.3 255 301-576 182-445 (576)
154 2w4o_A Calcium/calmodulin-depe 100.0 6E-40 2.1E-44 343.4 21.5 251 302-576 52-306 (349)
155 1ua2_A CAK, cell division prot 100.0 2.1E-40 7.1E-45 346.6 17.8 268 301-576 8-292 (346)
156 2y94_A 5'-AMP-activated protei 100.0 2.6E-40 9E-45 358.7 18.9 246 303-575 16-266 (476)
157 1byg_A CSK, protein (C-termina 100.0 1.5E-40 5E-45 336.6 15.7 252 302-582 20-273 (278)
158 3ttj_A Mitogen-activated prote 100.0 3.2E-40 1.1E-44 358.2 19.4 263 302-576 61-356 (464)
159 1b6c_B TGF-B superfamily recep 100.0 7.1E-40 2.4E-44 341.6 21.3 272 293-583 32-337 (342)
160 2zmd_A Dual specificity protei 100.0 2E-40 6.7E-45 352.3 17.3 250 303-576 56-321 (390)
161 3dls_A PAS domain-containing s 100.0 2.5E-40 8.6E-45 344.3 16.9 242 302-576 23-275 (335)
162 4fl3_A Tyrosine-protein kinase 100.0 1.9E-40 6.6E-45 372.8 17.2 250 309-583 375-632 (635)
163 3pg1_A Mitogen-activated prote 100.0 1.2E-40 4.2E-45 350.4 14.6 275 293-576 12-317 (362)
164 2r3i_A Cell division protein k 100.0 5.6E-40 1.9E-44 335.7 19.0 267 303-576 3-284 (299)
165 1x8b_A WEE1HU, WEE1-like prote 100.0 2.2E-40 7.5E-45 336.2 15.8 247 302-576 10-280 (289)
166 3kk8_A Calcium/calmodulin depe 100.0 7.7E-40 2.6E-44 332.1 19.7 252 302-576 5-262 (284)
167 2jii_A Serine/threonine-protei 100.0 2E-40 7E-45 347.5 15.9 264 303-584 42-338 (352)
168 2a19_B Interferon-induced, dou 100.0 2.7E-40 9.4E-45 335.2 16.3 251 301-584 9-276 (284)
169 1u5q_A Serine/threonine protei 100.0 3E-40 1E-44 345.5 16.9 245 304-576 55-306 (348)
170 1nxk_A MAP kinase-activated pr 100.0 1.3E-39 4.6E-44 347.0 22.1 251 304-576 62-322 (400)
171 2a2a_A Death-associated protei 100.0 1.8E-39 6.3E-44 335.8 22.5 252 302-576 11-273 (321)
172 2qr7_A Ribosomal protein S6 ki 100.0 2.9E-40 9.8E-45 344.6 16.3 252 302-576 21-278 (342)
173 2ac3_A MAP kinase-interacting 100.0 2.4E-39 8.1E-44 333.9 22.9 256 303-576 12-296 (316)
174 2yfx_A Tyrosine-protein kinase 100.0 3.8E-40 1.3E-44 341.8 17.0 263 301-583 28-305 (327)
175 4aaa_A Cyclin-dependent kinase 100.0 1.4E-40 4.9E-45 345.6 13.8 266 303-576 25-307 (331)
176 1cm8_A Phosphorylated MAP kina 100.0 3.2E-40 1.1E-44 347.8 16.6 261 302-576 24-308 (367)
177 2clq_A Mitogen-activated prote 100.0 1.6E-39 5.4E-44 331.6 20.7 253 304-576 23-279 (295)
178 2jam_A Calcium/calmodulin-depe 100.0 8.5E-40 2.9E-44 335.5 18.5 251 302-576 8-262 (304)
179 3byv_A Rhoptry kinase; malaria 100.0 5.9E-41 2E-45 355.0 10.2 243 302-575 72-359 (377)
180 3mi9_A Cell division protein k 100.0 9.5E-40 3.3E-44 342.2 19.1 266 303-576 17-312 (351)
181 2rku_A Serine/threonine-protei 100.0 6.7E-40 2.3E-44 334.5 17.4 248 303-576 15-266 (294)
182 3bhy_A Death-associated protei 100.0 2.7E-39 9.1E-44 328.0 21.2 251 303-576 5-266 (283)
183 2owb_A Serine/threonine-protei 100.0 9.1E-40 3.1E-44 340.2 18.1 248 303-576 41-292 (335)
184 3ll6_A Cyclin G-associated kin 100.0 3.9E-40 1.3E-44 342.4 15.3 257 302-583 27-309 (337)
185 1u46_A ACK-1, activated CDC42 100.0 3.6E-40 1.2E-44 335.7 14.7 258 303-583 18-285 (291)
186 2vgo_A Serine/threonine-protei 100.0 8E-40 2.8E-44 332.2 16.9 246 303-576 14-263 (284)
187 3rp9_A Mitogen-activated prote 100.0 1.3E-39 4.6E-44 353.7 19.8 265 303-576 53-397 (458)
188 2j7t_A Serine/threonine-protei 100.0 2.1E-39 7.1E-44 332.0 20.0 253 302-576 18-276 (302)
189 2yex_A Serine/threonine-protei 100.0 6.8E-40 2.3E-44 331.0 16.1 252 303-576 7-262 (276)
190 3eqc_A Dual specificity mitoge 100.0 3.9E-40 1.3E-44 346.4 14.9 266 302-576 32-325 (360)
191 3n9x_A Phosphotransferase; mal 100.0 4.3E-39 1.5E-43 346.8 22.8 199 302-508 25-253 (432)
192 3a7i_A MST3 kinase, serine/thr 100.0 1.4E-39 4.9E-44 333.5 18.1 248 303-576 22-271 (303)
193 3fme_A Dual specificity mitoge 100.0 7.3E-40 2.5E-44 333.2 15.2 256 301-576 5-267 (290)
194 4e7w_A Glycogen synthase kinas 100.0 4.9E-40 1.7E-44 349.9 14.1 263 304-576 41-322 (394)
195 2h6d_A 5'-AMP-activated protei 100.0 1.7E-39 5.8E-44 328.2 17.3 248 302-576 10-262 (276)
196 2vwi_A Serine/threonine-protei 100.0 5E-40 1.7E-44 336.5 13.4 268 298-576 10-288 (303)
197 3pfq_A PKC-B, PKC-beta, protei 100.0 1.8E-39 6.2E-44 367.4 19.1 251 299-575 337-597 (674)
198 1j1b_A Glycogen synthase kinas 100.0 5.8E-40 2E-44 352.2 14.3 263 304-576 55-337 (420)
199 3qyz_A Mitogen-activated prote 100.0 7.4E-39 2.5E-43 337.2 22.4 266 302-576 26-314 (364)
200 2y7j_A Phosphorylase B kinase 100.0 5E-39 1.7E-43 338.5 21.0 258 296-576 87-360 (365)
201 3e3p_A Protein kinase, putativ 100.0 3.6E-39 1.2E-43 338.8 19.9 274 296-576 16-315 (360)
202 3nsz_A CK II alpha, casein kin 100.0 7.1E-39 2.4E-43 332.4 21.7 257 303-576 36-320 (330)
203 3lm5_A Serine/threonine-protei 100.0 1.2E-39 4E-44 338.2 15.8 262 294-576 19-288 (327)
204 3com_A Serine/threonine-protei 100.0 1.6E-38 5.5E-43 327.4 24.0 252 300-575 26-278 (314)
205 3i6u_A CDS1, serine/threonine- 100.0 2E-39 6.9E-44 347.8 17.8 254 300-576 132-400 (419)
206 2j0j_A Focal adhesion kinase 1 100.0 2E-39 6.9E-44 365.9 18.6 262 298-583 385-652 (656)
207 1blx_A Cyclin-dependent kinase 100.0 2.6E-39 8.7E-44 335.1 17.9 268 301-576 9-297 (326)
208 3kvw_A DYRK2, dual specificity 100.0 2E-39 6.8E-44 348.8 17.6 264 302-576 96-409 (429)
209 3sv0_A Casein kinase I-like; t 100.0 1.5E-38 5.2E-43 345.5 24.6 262 302-582 6-278 (483)
210 2b9h_A MAP kinase FUS3, mitoge 100.0 6.7E-40 2.3E-44 343.4 13.5 266 302-576 10-306 (353)
211 3q60_A ROP5B; pseudokinase, tr 100.0 8.2E-40 2.8E-44 345.4 14.1 253 303-575 62-352 (371)
212 2fst_X Mitogen-activated prote 100.0 1.5E-39 5.2E-44 342.5 16.0 261 302-576 28-312 (367)
213 3lij_A Calcium/calmodulin depe 100.0 2.2E-39 7.5E-44 355.2 17.3 250 303-576 37-292 (494)
214 3an0_A Dual specificity mitoge 100.0 1.5E-39 5.2E-44 339.1 15.0 256 301-576 49-311 (340)
215 2x7f_A TRAF2 and NCK-interacti 100.0 9.7E-40 3.3E-44 338.3 13.4 259 294-575 15-286 (326)
216 2pml_X PFPK7, Ser/Thr protein 100.0 1.9E-39 6.4E-44 339.3 15.7 259 302-576 30-323 (348)
217 1t4h_A Serine/threonine-protei 100.0 2.4E-38 8.3E-43 322.3 23.4 247 304-576 27-283 (290)
218 2xrw_A Mitogen-activated prote 100.0 4.5E-39 1.5E-43 339.8 18.5 269 303-583 25-328 (371)
219 3q5i_A Protein kinase; CDPK, m 100.0 3.2E-39 1.1E-43 354.8 17.9 251 302-576 35-302 (504)
220 3mwu_A Calmodulin-domain prote 100.0 2.5E-39 8.4E-44 354.2 16.8 251 302-576 21-277 (486)
221 2wtk_C Serine/threonine-protei 100.0 1E-38 3.4E-43 327.4 20.2 251 302-576 4-264 (305)
222 1wak_A Serine/threonine-protei 100.0 1.1E-38 3.9E-43 339.2 21.4 265 302-576 36-392 (397)
223 3nyv_A Calmodulin-domain prote 100.0 1.3E-39 4.3E-44 356.4 13.9 251 302-576 25-282 (484)
224 1phk_A Phosphorylase kinase; g 100.0 1.3E-38 4.4E-43 325.5 19.9 252 302-576 16-284 (298)
225 2y4i_B KSR2, HKSR2, kinase sup 100.0 7.4E-40 2.5E-44 338.0 10.6 263 296-583 26-303 (319)
226 1z57_A Dual specificity protei 100.0 1.1E-38 3.9E-43 331.5 19.4 264 302-576 13-329 (339)
227 2i6l_A Mitogen-activated prote 100.0 1.9E-39 6.3E-44 334.8 13.2 266 302-576 10-306 (320)
228 3cek_A Dual specificity protei 100.0 2.5E-39 8.5E-44 333.4 13.0 256 297-576 22-293 (313)
229 2ycf_A Serine/threonine-protei 100.0 1.1E-38 3.8E-43 330.0 17.8 251 302-575 9-274 (322)
230 4exu_A Mitogen-activated prote 100.0 7.9E-38 2.7E-42 330.2 23.1 259 303-576 42-324 (371)
231 3rgf_A Cyclin-dependent kinase 100.0 3.4E-38 1.2E-42 337.1 20.3 266 305-576 22-334 (405)
232 2vx3_A Dual specificity tyrosi 100.0 2.2E-38 7.4E-43 335.9 18.5 269 299-576 50-373 (382)
233 1q8y_A SR protein kinase; tran 100.0 9.1E-38 3.1E-42 329.7 22.1 265 302-576 18-334 (373)
234 3coi_A Mitogen-activated prote 100.0 2.6E-38 8.7E-43 331.7 17.5 259 303-576 24-306 (353)
235 2rio_A Serine/threonine-protei 100.0 6.7E-38 2.3E-42 337.6 19.0 251 305-575 17-295 (434)
236 1zy4_A Serine/threonine-protei 100.0 4E-38 1.4E-42 322.1 15.9 252 302-576 5-284 (303)
237 2wei_A Calmodulin-domain prote 100.0 2.7E-37 9.3E-42 314.1 21.9 252 301-576 20-277 (287)
238 2iwi_A Serine/threonine-protei 100.0 2.6E-38 8.9E-43 325.6 14.4 245 298-576 26-284 (312)
239 2eu9_A Dual specificity protei 100.0 1.1E-37 3.8E-42 326.3 19.4 264 302-576 18-334 (355)
240 3aln_A Dual specificity mitoge 100.0 4.9E-38 1.7E-42 325.8 16.5 258 302-576 21-286 (327)
241 3fhr_A MAP kinase-activated pr 100.0 8.2E-38 2.8E-42 325.5 18.1 253 302-576 27-288 (336)
242 3a99_A Proto-oncogene serine/t 100.0 4.5E-39 1.5E-43 332.7 8.3 246 297-576 37-294 (320)
243 2dyl_A Dual specificity mitoge 100.0 7.9E-37 2.7E-41 315.1 21.5 250 303-575 25-283 (318)
244 3p23_A Serine/threonine-protei 100.0 3.3E-37 1.1E-41 331.5 17.2 249 302-575 23-283 (432)
245 3qa8_A MGC80376 protein; kinas 100.0 2.5E-37 8.6E-42 343.4 15.9 267 303-581 14-308 (676)
246 2pzi_A Probable serine/threoni 100.0 1.6E-36 5.4E-41 345.1 18.2 243 302-584 79-330 (681)
247 3uqc_A Probable conserved tran 100.0 5.9E-36 2E-40 304.2 20.0 231 302-583 30-266 (286)
248 3dzo_A Rhoptry kinase domain; 100.0 2.2E-36 7.6E-41 323.6 11.6 242 303-575 78-363 (413)
249 3m2w_A MAP kinase-activated pr 100.0 4.2E-35 1.4E-39 299.9 19.1 227 303-576 17-257 (299)
250 2vuw_A Serine/threonine-protei 100.0 4.2E-36 1.4E-40 312.6 11.2 242 302-574 19-329 (336)
251 4azs_A Methyltransferase WBDD; 100.0 1.6E-29 5.4E-34 280.1 3.9 185 311-507 242-438 (569)
252 1ogq_A PGIP-2, polygalacturona 99.9 7.2E-27 2.5E-31 240.3 13.1 163 40-204 2-172 (313)
253 3en9_A Glycoprotease, O-sialog 99.9 1.1E-26 3.9E-31 255.8 8.3 185 306-508 339-539 (540)
254 1zar_A RIO2 kinase; serine kin 99.9 2.9E-23 1E-27 209.7 9.8 154 295-481 82-253 (282)
255 4ecn_A Leucine-rich repeat pro 99.9 1.4E-23 4.7E-28 241.8 5.9 161 38-203 263-539 (876)
256 3rgz_A Protein brassinosteroid 99.9 3E-23 1E-27 239.2 7.2 156 41-199 9-196 (768)
257 4eco_A Uncharacterized protein 99.9 5.5E-23 1.9E-27 231.8 7.4 161 41-203 27-297 (636)
258 4fcg_A Uncharacterized protein 99.8 2.4E-21 8.1E-26 200.4 7.1 165 35-203 18-204 (328)
259 3e6j_A Variable lymphocyte rec 99.8 4E-20 1.4E-24 181.0 12.6 147 70-217 15-176 (229)
260 2v9t_B SLIT homolog 2 protein 99.8 2.1E-19 7.3E-24 174.6 10.7 144 74-217 11-169 (220)
261 1zth_A RIO1 serine protein kin 99.8 4.1E-19 1.4E-23 177.0 11.0 136 305-456 49-219 (258)
262 2v70_A SLIT-2, SLIT homolog 2 99.8 5.2E-19 1.8E-23 171.9 9.6 144 74-217 11-170 (220)
263 2o6s_A Variable lymphocyte rec 99.8 1.8E-18 6E-23 166.5 12.3 145 73-217 6-165 (208)
264 1w8a_A SLIT protein; signaling 99.7 3.6E-18 1.2E-22 162.2 8.5 125 74-198 8-143 (192)
265 3rgz_A Protein brassinosteroid 99.7 2.6E-18 9E-23 197.9 7.8 135 89-223 612-750 (768)
266 2o6r_A Variable lymphocyte rec 99.7 1.5E-17 5.2E-22 155.6 9.8 125 74-198 7-141 (177)
267 3m19_A Variable lymphocyte rec 99.7 2.2E-17 7.5E-22 163.7 10.3 118 86-203 36-153 (251)
268 3oja_A Leucine-rich immune mol 99.7 1.3E-18 4.5E-23 189.6 -0.7 138 74-215 109-252 (487)
269 3m19_A Variable lymphocyte rec 99.7 1.6E-16 5.5E-21 157.5 11.5 131 85-215 59-194 (251)
270 2o6q_A Variable lymphocyte rec 99.7 1.9E-16 6.5E-21 158.8 11.6 115 87-201 39-153 (270)
271 1ogq_A PGIP-2, polygalacturona 99.7 3.1E-17 1.1E-21 168.2 5.4 133 86-221 175-312 (313)
272 2wfh_A SLIT homolog 2 protein 99.7 1.9E-16 6.4E-21 150.4 9.8 124 90-217 15-143 (193)
273 4g8a_A TOLL-like receptor 4; l 99.6 1.8E-16 6E-21 178.2 10.1 156 57-212 7-185 (635)
274 4gyi_A RIO2 kinase; protein ki 99.6 1.7E-16 5.7E-21 164.7 8.7 148 297-457 89-266 (397)
275 3rfs_A Internalin B, repeat mo 99.6 4.6E-16 1.6E-20 156.1 11.7 133 85-217 85-222 (272)
276 1w8a_A SLIT protein; signaling 99.6 3.3E-16 1.1E-20 148.6 8.8 127 88-217 11-143 (192)
277 2xot_A Amphoterin-induced prot 99.6 2.3E-16 7.8E-21 165.2 8.5 128 74-201 18-156 (361)
278 2wfh_A SLIT homolog 2 protein 99.6 7.4E-16 2.5E-20 146.3 10.5 122 74-196 10-141 (193)
279 2o6q_A Variable lymphocyte rec 99.6 1.6E-15 5.5E-20 152.0 11.8 129 87-215 87-220 (270)
280 2v70_A SLIT-2, SLIT homolog 2 99.6 6E-16 2.1E-20 150.1 8.4 114 85-198 57-170 (220)
281 1p9a_G Platelet glycoprotein I 99.6 2E-15 6.9E-20 152.9 11.4 131 85-217 77-212 (290)
282 2je0_A Acidic leucine-rich nuc 99.6 6.4E-16 2.2E-20 140.1 6.8 112 85-198 17-130 (149)
283 4fcg_A Uncharacterized protein 99.6 1.6E-15 5.4E-20 156.6 9.5 118 85-204 150-276 (328)
284 1ozn_A Reticulon 4 receptor; N 99.6 1.2E-15 4.1E-20 154.1 8.4 117 86-202 81-198 (285)
285 2ell_A Acidic leucine-rich nuc 99.6 2.7E-15 9.2E-20 138.9 9.6 112 85-198 24-137 (168)
286 4b8c_D Glucose-repressible alc 99.6 4.6E-16 1.6E-20 177.3 4.6 156 42-201 130-336 (727)
287 3v47_A TOLL-like receptor 5B a 99.6 2.2E-15 7.4E-20 162.7 8.9 133 85-217 275-412 (455)
288 2v9t_B SLIT homolog 2 protein 99.6 3.3E-15 1.1E-19 144.9 8.9 112 85-196 56-167 (220)
289 3v47_A TOLL-like receptor 5B a 99.6 2.9E-15 1E-19 161.6 9.3 132 72-203 6-152 (455)
290 3vq2_A TLR4, TOLL-like recepto 99.6 3.9E-15 1.3E-19 166.8 10.6 134 71-204 4-152 (606)
291 2z66_A Variable lymphocyte rec 99.6 2.6E-15 9E-20 153.2 7.8 115 87-201 128-243 (306)
292 3g39_A Variable lymphocyte rec 99.6 8.1E-15 2.8E-19 136.1 10.2 108 88-198 12-119 (170)
293 2z62_A TOLL-like receptor 4, v 99.6 7E-15 2.4E-19 147.7 10.2 119 86-204 29-148 (276)
294 2o6s_A Variable lymphocyte rec 99.6 9.7E-15 3.3E-19 140.2 10.3 115 85-199 52-166 (208)
295 2z81_A CD282 antigen, TOLL-lik 99.5 2.5E-15 8.7E-20 166.2 6.4 130 73-203 3-146 (549)
296 2r9u_A Variable lymphocyte rec 99.5 1E-14 3.6E-19 135.8 9.6 108 88-198 15-122 (174)
297 2o6r_A Variable lymphocyte rec 99.5 2.3E-14 7.7E-19 133.9 11.6 127 87-216 9-140 (177)
298 3e6j_A Variable lymphocyte rec 99.5 1.3E-14 4.5E-19 141.5 10.2 113 85-198 64-176 (229)
299 1ozn_A Reticulon 4 receptor; N 99.5 1.4E-14 4.9E-19 146.2 10.5 119 85-203 32-151 (285)
300 3oja_B Anopheles plasmodium-re 99.5 5.9E-15 2E-19 165.0 8.1 142 61-203 7-169 (597)
301 3rfs_A Internalin B, repeat mo 99.5 1.8E-14 6.3E-19 144.4 10.6 115 85-199 109-223 (272)
302 4g8a_A TOLL-like receptor 4; l 99.5 7.4E-15 2.5E-19 165.0 8.6 134 85-218 445-585 (635)
303 2z80_A TOLL-like receptor 2, v 99.5 4.8E-15 1.6E-19 154.6 6.4 132 71-204 27-173 (353)
304 2id5_A Lingo-1, leucine rich r 99.5 1.3E-14 4.5E-19 157.6 9.0 130 75-204 12-151 (477)
305 3vq2_A TLR4, TOLL-like recepto 99.5 1.1E-14 3.8E-19 163.1 7.6 131 86-217 425-562 (606)
306 2z62_A TOLL-like receptor 4, v 99.5 2.8E-14 9.7E-19 143.2 9.8 117 85-201 52-169 (276)
307 2z66_A Variable lymphocyte rec 99.5 7.1E-15 2.4E-19 150.0 5.4 129 74-203 7-148 (306)
308 3o6n_A APL1; leucine-rich repe 99.5 1.4E-14 4.7E-19 153.2 7.6 141 63-204 3-164 (390)
309 2xwt_C Thyrotropin receptor; s 99.5 1.1E-14 3.8E-19 143.0 6.4 118 85-204 31-154 (239)
310 1dce_A Protein (RAB geranylger 99.5 1.7E-14 5.9E-19 159.4 8.7 109 86-199 442-551 (567)
311 3zyi_A Leucine-rich repeat-con 99.5 3.2E-14 1.1E-18 153.5 9.7 128 76-203 56-194 (452)
312 3zyj_A Leucine-rich repeat-con 99.5 3.7E-14 1.3E-18 152.4 9.4 131 86-218 137-297 (440)
313 1ziw_A TOLL-like receptor 3; i 99.5 5E-14 1.7E-18 160.0 10.3 130 74-203 4-143 (680)
314 1p9a_G Platelet glycoprotein I 99.5 7.4E-14 2.5E-18 141.4 10.5 113 86-201 32-144 (290)
315 2ifg_A High affinity nerve gro 99.5 4.1E-14 1.4E-18 147.1 8.5 109 74-196 8-118 (347)
316 3j0a_A TOLL-like receptor 5; m 99.5 3.4E-14 1.2E-18 165.3 8.6 129 74-203 14-146 (844)
317 3t6q_A CD180 antigen; protein- 99.5 4E-14 1.4E-18 158.5 8.4 130 86-216 426-563 (606)
318 3t6q_A CD180 antigen; protein- 99.5 5.6E-14 1.9E-18 157.4 9.4 125 76-200 14-149 (606)
319 2ft3_A Biglycan; proteoglycan, 99.5 9.2E-14 3.2E-18 143.5 10.1 127 74-203 33-171 (332)
320 3zyi_A Leucine-rich repeat-con 99.5 7E-14 2.4E-18 150.8 9.5 132 85-218 147-308 (452)
321 3j0a_A TOLL-like receptor 5; m 99.5 2.7E-14 9.2E-19 166.2 6.5 132 85-218 426-565 (844)
322 4eco_A Uncharacterized protein 99.5 2E-14 6.7E-19 161.9 5.2 137 74-212 193-365 (636)
323 2xot_A Amphoterin-induced prot 99.5 5.5E-14 1.9E-18 147.0 8.1 133 85-217 64-206 (361)
324 1xku_A Decorin; proteoglycan, 99.5 1.3E-13 4.5E-18 142.2 10.8 128 73-203 30-169 (330)
325 2ell_A Acidic leucine-rich nuc 99.5 8.1E-14 2.8E-18 128.8 7.6 111 85-197 49-163 (168)
326 3g39_A Variable lymphocyte rec 99.4 1.4E-13 4.9E-18 127.6 9.1 101 74-174 9-119 (170)
327 2z63_A TOLL-like receptor 4, v 99.4 5.9E-14 2E-18 155.8 7.6 132 86-217 397-535 (570)
328 2z63_A TOLL-like receptor 4, v 99.4 2.2E-13 7.5E-18 151.2 10.2 118 86-203 29-147 (570)
329 3oja_B Anopheles plasmodium-re 99.4 2.2E-13 7.4E-18 152.3 10.0 119 85-203 75-193 (597)
330 3zyj_A Leucine-rich repeat-con 99.4 1.8E-13 6E-18 147.2 8.9 128 76-203 45-183 (440)
331 1ziw_A TOLL-like receptor 3; i 99.4 1.7E-13 5.8E-18 155.6 8.7 132 86-217 481-626 (680)
332 4ezg_A Putative uncharacterize 99.4 1.4E-13 4.7E-18 130.9 6.6 110 85-197 66-175 (197)
333 1a9n_A U2A', U2A'; complex (nu 99.4 2.4E-13 8.2E-18 126.8 8.0 107 86-197 20-129 (176)
334 4ecn_A Leucine-rich repeat pro 99.4 1.1E-13 3.7E-18 159.5 6.4 127 74-203 435-593 (876)
335 2je0_A Acidic leucine-rich nuc 99.4 1E-13 3.6E-18 125.4 4.9 104 85-190 42-149 (149)
336 2id5_A Lingo-1, leucine rich r 99.4 1.7E-13 5.9E-18 148.8 7.5 119 85-203 56-174 (477)
337 4ezg_A Putative uncharacterize 99.4 3.3E-13 1.1E-17 128.3 8.4 110 85-198 44-153 (197)
338 3o53_A Protein LRIM1, AGAP0063 99.4 1.8E-13 6.2E-18 140.3 6.9 133 79-215 114-252 (317)
339 3a79_B TLR6, VLRB.59, TOLL-lik 99.4 2.9E-13 9.9E-18 150.2 8.9 131 85-215 353-512 (562)
340 1wwl_A Monocyte differentiatio 99.4 1.4E-13 4.7E-18 140.9 5.4 108 86-194 96-214 (312)
341 3o6n_A APL1; leucine-rich repe 99.4 5.6E-13 1.9E-17 140.8 9.9 119 85-203 69-187 (390)
342 2z7x_B TOLL-like receptor 1, v 99.4 2.9E-13 9.9E-18 148.6 7.5 108 85-194 324-434 (520)
343 2r9u_A Variable lymphocyte rec 99.4 7.1E-13 2.4E-17 123.4 9.0 102 112-216 15-121 (174)
344 3cvr_A Invasion plasmid antige 99.4 1.8E-13 6.2E-18 150.7 5.0 133 62-212 32-172 (571)
345 3a79_B TLR6, VLRB.59, TOLL-lik 99.4 4.6E-13 1.6E-17 148.6 8.2 111 85-198 52-163 (562)
346 2ft3_A Biglycan; proteoglycan, 99.4 5.1E-13 1.8E-17 137.8 7.8 116 85-201 147-284 (332)
347 1xku_A Decorin; proteoglycan, 99.4 1E-12 3.5E-17 135.4 9.9 114 85-202 145-260 (330)
348 2z80_A TOLL-like receptor 2, v 99.4 2.7E-13 9.4E-18 141.2 5.5 119 85-204 76-197 (353)
349 1wwl_A Monocyte differentiatio 99.4 2.7E-13 9.4E-18 138.7 5.2 113 85-198 121-245 (312)
350 2z81_A CD282 antigen, TOLL-lik 99.4 2.6E-13 8.9E-18 150.0 5.4 120 85-204 50-171 (549)
351 4glp_A Monocyte differentiatio 99.3 4E-13 1.4E-17 137.3 5.4 117 85-202 117-245 (310)
352 1a9n_A U2A', U2A'; complex (nu 99.3 3.6E-13 1.2E-17 125.6 4.4 105 86-194 43-153 (176)
353 2xwt_C Thyrotropin receptor; s 99.3 6.8E-13 2.3E-17 130.1 6.3 115 85-201 55-176 (239)
354 4b8c_D Glucose-repressible alc 99.3 9.5E-13 3.2E-17 150.0 8.5 109 101-213 216-329 (727)
355 2z7x_B TOLL-like receptor 1, v 99.3 9.2E-13 3.1E-17 144.6 6.9 114 86-201 303-419 (520)
356 3oja_A Leucine-rich immune mol 99.3 7.6E-13 2.6E-17 144.0 4.5 115 85-203 144-260 (487)
357 4glp_A Monocyte differentiatio 99.3 2.4E-12 8.3E-17 131.5 7.2 110 86-195 92-211 (310)
358 1ds9_A Outer arm dynein; leuci 99.3 5.6E-14 1.9E-18 133.8 -4.8 107 86-197 49-156 (198)
359 1h6t_A Internalin B; cell adhe 99.3 6.4E-12 2.2E-16 127.1 10.1 106 85-198 68-173 (291)
360 3tm0_A Aminoglycoside 3'-phosp 99.3 1.3E-11 4.4E-16 122.7 11.7 145 300-454 11-212 (263)
361 2ifg_A High affinity nerve gro 99.3 3.5E-12 1.2E-16 132.4 7.5 104 112-217 11-120 (347)
362 1ds9_A Outer arm dynein; leuci 99.3 1.2E-13 4E-18 131.6 -4.6 125 86-215 19-155 (198)
363 1xeu_A Internalin C; cellular 99.3 1.5E-11 5E-16 122.5 10.4 103 85-196 63-165 (263)
364 3o53_A Protein LRIM1, AGAP0063 99.2 1.8E-12 6.3E-17 132.8 3.3 115 85-203 144-260 (317)
365 1h6u_A Internalin H; cell adhe 99.2 1.4E-11 4.7E-16 125.8 9.8 106 85-198 63-168 (308)
366 4fmz_A Internalin; leucine ric 99.2 1.4E-11 4.7E-16 127.8 9.8 107 86-198 222-328 (347)
367 1h6u_A Internalin H; cell adhe 99.2 1.2E-11 4.3E-16 126.1 8.9 106 85-198 85-190 (308)
368 4ay9_X Follicle-stimulating ho 99.2 7.4E-12 2.5E-16 130.2 7.1 126 74-199 9-147 (350)
369 1dce_A Protein (RAB geranylger 99.2 1.1E-11 3.6E-16 137.1 8.6 101 85-188 463-567 (567)
370 1h6t_A Internalin B; cell adhe 99.2 2.1E-11 7.2E-16 123.3 10.0 105 84-196 89-193 (291)
371 1m9s_A Internalin B; cell inva 99.2 2.4E-11 8.3E-16 135.1 10.5 106 85-198 65-170 (605)
372 3cvr_A Invasion plasmid antige 99.2 9.3E-12 3.2E-16 137.1 5.5 111 86-213 121-243 (571)
373 1xeu_A Internalin C; cellular 99.2 4.9E-11 1.7E-15 118.7 9.5 103 85-196 41-143 (263)
374 4fmz_A Internalin; leucine ric 99.2 3E-11 1E-15 125.2 7.7 104 85-194 243-346 (347)
375 1m9s_A Internalin B; cell inva 99.2 3.8E-11 1.3E-15 133.5 8.6 104 85-196 87-190 (605)
376 3g06_A SSPH2 (leucine-rich rep 99.1 9.3E-12 3.2E-16 138.7 3.2 118 62-195 11-135 (622)
377 1o6v_A Internalin A; bacterial 99.1 5.7E-11 1.9E-15 128.5 8.9 103 86-196 244-346 (466)
378 1nd4_A Aminoglycoside 3'-phosp 99.1 1.7E-10 5.7E-15 114.2 10.8 129 312-455 29-214 (264)
379 1jl5_A Outer protein YOPM; leu 99.1 1.2E-11 4.2E-16 133.1 1.3 48 86-134 12-59 (454)
380 2ca6_A RAN GTPase-activating p 99.1 9.1E-12 3.1E-16 131.3 -0.2 117 85-201 159-298 (386)
381 1o6v_A Internalin A; bacterial 99.1 1.7E-10 5.9E-15 124.7 9.7 106 85-198 221-326 (466)
382 3bz5_A Internalin-J, INLJ; leu 99.1 2.1E-10 7.3E-15 123.5 10.2 100 85-195 127-226 (457)
383 2ast_B S-phase kinase-associat 99.1 8.8E-12 3E-16 128.6 -0.8 107 87-194 72-182 (336)
384 3bz5_A Internalin-J, INLJ; leu 99.1 1.8E-10 6.3E-15 124.0 9.2 105 85-198 170-281 (457)
385 2ast_B S-phase kinase-associat 99.1 1.1E-11 3.7E-16 127.9 -1.3 116 85-200 93-217 (336)
386 1jl5_A Outer protein YOPM; leu 99.0 1.6E-10 5.5E-15 124.4 6.7 62 133-202 317-380 (454)
387 3goz_A Leucine-rich repeat-con 99.0 4.5E-11 1.6E-15 124.8 1.8 114 86-199 23-156 (362)
388 3g06_A SSPH2 (leucine-rich rep 99.0 1.6E-10 5.5E-15 128.7 6.3 84 109-201 221-304 (622)
389 3goz_A Leucine-rich repeat-con 99.0 4.3E-11 1.5E-15 125.0 1.2 116 86-201 52-187 (362)
390 4ay9_X Follicle-stimulating ho 99.0 2.6E-10 9E-15 118.4 6.7 111 89-202 13-125 (350)
391 3dxp_A Putative acyl-COA dehyd 99.0 1.9E-09 6.5E-14 112.3 12.5 142 307-455 42-248 (359)
392 2ca6_A RAN GTPase-activating p 99.0 6.4E-11 2.2E-15 124.7 0.4 112 85-196 122-259 (386)
393 3sg8_A APH(2'')-ID; antibiotic 98.9 8.4E-10 2.9E-14 112.2 6.7 187 308-508 25-288 (304)
394 3rw6_A Nuclear RNA export fact 98.9 8.7E-11 3E-15 116.0 -2.4 158 38-199 29-238 (267)
395 1z7x_W Ribonuclease inhibitor; 98.7 2.3E-10 8E-15 123.2 -5.3 115 85-199 227-359 (461)
396 1z7x_W Ribonuclease inhibitor; 98.7 5.8E-10 2E-14 120.1 -2.3 118 85-202 256-395 (461)
397 3rw6_A Nuclear RNA export fact 98.7 2.9E-09 9.9E-14 105.1 1.0 80 106-187 167-257 (267)
398 3un9_A NLR family member X1; l 98.7 2.6E-09 8.8E-14 111.7 -0.3 112 85-196 101-226 (372)
399 3un9_A NLR family member X1; l 98.5 6.8E-09 2.3E-13 108.5 -1.1 110 86-195 73-197 (372)
400 3r70_A Aminoglycoside phosphot 98.5 5.2E-07 1.8E-11 92.1 12.9 137 304-456 38-238 (320)
401 3d1u_A Putative fructosamine-3 98.4 1.9E-06 6.5E-11 86.5 13.7 142 307-454 19-215 (288)
402 1io0_A Tropomodulin; LRR prote 98.4 1.9E-08 6.4E-13 94.2 -1.0 110 85-194 36-164 (185)
403 3sb4_A Hypothetical leucine ri 98.4 1.8E-07 6E-12 96.0 5.6 92 108-201 225-317 (329)
404 3sb4_A Hypothetical leucine ri 98.4 3.2E-07 1.1E-11 94.1 7.0 116 85-203 101-295 (329)
405 3ogk_B Coronatine-insensitive 98.3 4.3E-08 1.5E-12 109.0 -1.4 110 86-195 379-502 (592)
406 4gkh_A Aminoglycoside 3'-phosp 98.3 3E-06 1E-10 84.0 12.1 135 310-455 31-223 (272)
407 3tdw_A Gentamicin resistance p 98.3 4.5E-06 1.5E-10 84.6 12.1 136 308-455 24-224 (306)
408 3ogk_B Coronatine-insensitive 98.2 1.5E-07 5.2E-12 104.5 -0.3 105 86-191 139-253 (592)
409 3ats_A Putative uncharacterize 98.2 4.1E-06 1.4E-10 86.7 9.1 79 309-387 26-121 (357)
410 3ovc_A Hygromycin-B 4-O-kinase 98.1 1E-05 3.6E-10 83.9 11.5 144 307-456 45-244 (362)
411 2q83_A YTAA protein; 2635576, 98.1 4.2E-05 1.4E-09 78.3 14.4 141 309-454 38-251 (346)
412 2p1m_B Transport inhibitor res 98.0 4.2E-07 1.4E-11 100.9 -2.8 112 85-197 372-497 (594)
413 1io0_A Tropomodulin; LRR prote 98.0 1.3E-06 4.5E-11 81.5 0.9 97 100-196 27-138 (185)
414 2ra8_A Uncharacterized protein 97.9 1.6E-06 5.4E-11 89.9 1.0 109 84-196 171-294 (362)
415 2p1m_B Transport inhibitor res 97.8 2.6E-06 9.1E-11 94.4 -0.3 107 85-191 105-221 (594)
416 2olc_A MTR kinase, methylthior 97.8 9.5E-05 3.3E-09 77.6 11.7 75 308-384 35-120 (397)
417 3f7w_A Putative fructosamine-3 97.8 0.00012 4.1E-09 73.1 11.4 78 304-385 16-96 (288)
418 4fdw_A Leucine rich hypothetic 97.7 2.8E-05 9.5E-10 81.8 6.4 102 86-191 227-333 (401)
419 2pyw_A Uncharacterized protein 97.7 6.2E-05 2.1E-09 79.7 8.7 80 424-504 231-313 (420)
420 3e4g_A ATP synthase subunit S, 97.6 1.6E-05 5.4E-10 72.8 2.3 83 110-192 62-150 (176)
421 3jr1_A Putative fructosamine-3 97.6 0.00029 9.9E-09 71.2 11.4 139 308-451 41-232 (312)
422 2ra8_A Uncharacterized protein 97.4 5.5E-05 1.9E-09 78.2 3.4 110 85-197 139-268 (362)
423 4fdw_A Leucine rich hypothetic 97.4 0.00019 6.6E-09 75.3 6.8 78 87-167 159-236 (401)
424 2ppq_A HSK, HK, homoserine kin 97.2 0.001 3.5E-08 67.3 9.9 158 294-454 8-216 (322)
425 3e4g_A ATP synthase subunit S, 97.2 8.8E-05 3E-09 67.8 1.5 86 85-170 61-153 (176)
426 3dxq_A Choline/ethanolamine ki 97.2 0.0017 5.9E-08 65.0 11.0 71 308-386 23-95 (301)
427 3csv_A Aminoglycoside phosphot 97.0 0.005 1.7E-07 62.6 13.0 143 309-456 24-218 (333)
428 3rfe_A Platelet glycoprotein I 97.0 0.00086 2.9E-08 58.2 6.0 55 89-145 12-67 (130)
429 1zyl_A Hypothetical protein YI 97.0 0.0055 1.9E-07 62.0 13.0 143 309-455 32-223 (328)
430 1nw1_A Choline kinase (49.2 KD 97.0 0.0013 4.5E-08 69.6 8.3 72 308-385 78-158 (429)
431 1pgv_A TMD-1, tropomodulin TMD 97.0 8.9E-05 3E-09 69.1 -0.7 107 86-192 42-168 (197)
432 3rfe_A Platelet glycoprotein I 96.9 0.00071 2.4E-08 58.7 4.8 57 112-170 11-68 (130)
433 3feg_A Choline/ethanolamine ki 96.8 0.0061 2.1E-07 63.2 11.2 143 308-455 55-254 (379)
434 2yle_A Protein spire homolog 1 96.7 0.0088 3E-07 56.0 10.7 98 385-502 34-131 (229)
435 2qg7_A Ethanolamine kinase PV0 96.7 0.0063 2.1E-07 64.8 10.4 74 308-386 113-188 (458)
436 3c5i_A Choline kinase; choline 96.5 0.0059 2E-07 63.0 9.1 72 309-385 39-120 (369)
437 1pgv_A TMD-1, tropomodulin TMD 96.4 0.00078 2.7E-08 62.7 1.4 92 102-193 34-138 (197)
438 3i1a_A Spectinomycin phosphotr 96.4 0.021 7.3E-07 58.1 11.8 31 425-455 206-236 (339)
439 4h09_A Hypothetical leucine ri 96.2 0.0057 1.9E-07 63.3 6.8 85 103-189 234-318 (379)
440 4gt6_A Cell surface protein; l 96.2 0.0077 2.6E-07 62.8 7.4 87 103-192 282-368 (394)
441 4fs7_A Uncharacterized protein 96.0 0.0051 1.7E-07 64.2 5.3 87 102-191 290-376 (394)
442 4gt6_A Cell surface protein; l 95.9 0.0073 2.5E-07 63.0 5.5 102 87-194 290-391 (394)
443 3f2s_A CK, chetk-alpha, cholin 95.4 0.028 9.5E-07 58.5 7.7 142 309-454 58-279 (401)
444 4fs7_A Uncharacterized protein 95.2 0.011 3.7E-07 61.6 4.0 109 87-202 255-363 (394)
445 3mes_A Choline kinase; malaria 94.7 0.14 4.7E-06 53.7 10.7 141 309-455 76-291 (424)
446 4h09_A Hypothetical leucine ri 94.7 0.046 1.6E-06 56.3 7.1 86 102-189 256-341 (379)
447 3g15_A CK, chetk-alpha, cholin 90.1 0.78 2.7E-05 47.6 8.8 29 427-455 246-280 (401)
448 4ann_A ESSB; membrane protein, 84.9 2.1 7.1E-05 39.9 7.3 115 357-508 43-158 (215)
449 4ano_A ESSB; membrane protein, 80.9 3.7 0.00013 38.3 7.3 115 357-508 48-163 (219)
450 3cxl_A N-chimerin; SH2, RHO-GA 78.7 0.26 9E-06 52.3 -1.5 61 306-369 145-214 (463)
451 3ls8_A Phosphatidylinositol 3- 68.9 58 0.002 35.2 13.7 85 362-454 402-501 (614)
452 2x6h_A GH13170P, VPS34, phosph 45.7 2.3E+02 0.008 31.1 13.7 85 362-454 476-575 (696)
453 2lz0_A Uncharacterized protein 41.9 69 0.0024 25.4 6.7 38 127-165 14-51 (100)
454 2lz0_A Uncharacterized protein 40.8 30 0.001 27.6 4.4 45 145-190 8-52 (100)
No 1
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=3.5e-55 Score=446.11 Aligned_cols=260 Identities=26% Similarity=0.478 Sum_probs=215.2
Q ss_pred CCCCcCceeccCCCceEEEEEeC------CccEEEEEEecCCCcccHHHHHHHHHHHHhccCCcccceeeeeecCCceEE
Q 006907 303 GNFSPKNILGQGGYGVVYKGCLP------NRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLL 376 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 376 (626)
++|.+.+.||+|+||+||+|.+. ++..||||+++.......++|.+|++++++++|||||+++|+|.+++..+|
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 45777899999999999999864 467899999987666666789999999999999999999999999999999
Q ss_pred EEeecCCCChHHHHhhcc---------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEE
Q 006907 377 VYPYMPNGSVADCLRDTR---------QAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVV 447 (626)
Q Consensus 377 v~E~~~~gsL~~~l~~~~---------~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki 447 (626)
|||||++|+|.++|+... .....++|..+..++.||+.||+|||++ +|+||||||+|||+++++++||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcEEE
Confidence 999999999999997632 2345699999999999999999999999 9999999999999999999999
Q ss_pred eeccCccccCCCCCce-eeeecccCCccCccccccCCCCccchhHHHHHHHHHHHh-CCCcCCCCCcccccccHHHHHHH
Q 006907 448 GDFGLAKLLDRRDSHV-TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNGQVQKGMILDCVRT 525 (626)
Q Consensus 448 ~DfG~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~i~~~~~~ 525 (626)
+|||+|+.....+... .....||+.|||||++.+..++.++|||||||++|||+| |+.||...+.. .+...
T Consensus 170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~----~~~~~--- 242 (299)
T 4asz_A 170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN----EVIEC--- 242 (299)
T ss_dssp CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH----HHHHH---
T ss_pred CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH----HHHHH---
Confidence 9999998765433322 223458999999999999999999999999999999999 89999754422 12211
Q ss_pred hhhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccc
Q 006907 526 LHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVE 582 (626)
Q Consensus 526 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~ 582 (626)
...... ...+..+++++.+|+.+||+.||++||||+||.+.|+.+.+
T Consensus 243 i~~~~~----------~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~ 289 (299)
T 4asz_A 243 ITQGRV----------LQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAK 289 (299)
T ss_dssp HHHTCC----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHcCCC----------CCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 111111 12334456789999999999999999999999999988654
No 2
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=2.2e-54 Score=446.26 Aligned_cols=260 Identities=25% Similarity=0.444 Sum_probs=209.6
Q ss_pred CCCCcCceeccCCCceEEEEEeC------CccEEEEEEecCCCcccHHHHHHHHHHHHhccCCcccceeeeeecCCceEE
Q 006907 303 GNFSPKNILGQGGYGVVYKGCLP------NRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLL 376 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 376 (626)
++|.+.++||+|+||+||+|.+. +++.||||+++.......++|.+|++++++++|||||+++|+|.+++..+|
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 34667789999999999999864 468899999987666666789999999999999999999999999999999
Q ss_pred EEeecCCCChHHHHhhccC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcE
Q 006907 377 VYPYMPNGSVADCLRDTRQ-----------AKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEA 445 (626)
Q Consensus 377 v~E~~~~gsL~~~l~~~~~-----------~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ 445 (626)
|||||++|+|.++++.... ...+++|.+++.|+.||+.||+|||++ +|+||||||+|||+++++++
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCCcE
Confidence 9999999999999986432 134699999999999999999999999 99999999999999999999
Q ss_pred EEeeccCccccCCCCCc-eeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHh-CCCcCCCCCcccccccHHHHH
Q 006907 446 VVGDFGLAKLLDRRDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNGQVQKGMILDCV 523 (626)
Q Consensus 446 ki~DfG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~i~~~~ 523 (626)
||+|||+++.....+.. ......||+.|||||++.+..++.++|||||||++|||+| |+.||....... +.
T Consensus 198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~----~~--- 270 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE----AI--- 270 (329)
T ss_dssp EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHH----HH---
T ss_pred EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHH----HH---
Confidence 99999999876543322 2344569999999999999999999999999999999999 899997544221 11
Q ss_pred HHhhhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccc
Q 006907 524 RTLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVE 582 (626)
Q Consensus 524 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~ 582 (626)
....... ....+..+++++.+|+.+||+.||++||||+||++.|+.+..
T Consensus 271 ~~i~~g~----------~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~ 319 (329)
T 4aoj_A 271 DCITQGR----------ELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ 319 (329)
T ss_dssp HHHHHTC----------CCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHH
T ss_pred HHHHcCC----------CCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhh
Confidence 1111111 112334456789999999999999999999999999998754
No 3
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=2e-54 Score=442.30 Aligned_cols=257 Identities=22% Similarity=0.361 Sum_probs=212.0
Q ss_pred CCCcCceeccCCCceEEEEEeC------CccEEEEEEecCCCc-ccHHHHHHHHHHHHhccCCcccceeeeeecCCceEE
Q 006907 304 NFSPKNILGQGGYGVVYKGCLP------NRMVVAVKRLKDPNF-TGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLL 376 (626)
Q Consensus 304 ~f~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 376 (626)
++.+.+.||+|+||+||+|.+. +++.||||+++.... ...++|.+|+.++++++|||||+++|+|.+++..+|
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l 106 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 106 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence 3456789999999999999863 467899999976543 335679999999999999999999999999999999
Q ss_pred EEeecCCCChHHHHhhccC------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCc
Q 006907 377 VYPYMPNGSVADCLRDTRQ------------AKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFE 444 (626)
Q Consensus 377 v~E~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~ 444 (626)
|||||++|+|.++|..... ....++|..+..|+.|||+||+|||++ +|+||||||+|||++++++
T Consensus 107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~~ 183 (308)
T 4gt4_A 107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLN 183 (308)
T ss_dssp EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGC
T ss_pred EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCCCC
Confidence 9999999999999975321 134699999999999999999999999 9999999999999999999
Q ss_pred EEEeeccCccccCCCCC-ceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHh-CCCcCCCCCcccccccHHHH
Q 006907 445 AVVGDFGLAKLLDRRDS-HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNGQVQKGMILDC 522 (626)
Q Consensus 445 ~ki~DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~i~~~ 522 (626)
+||+|||+++.....+. .......||+.|||||++.++.++.++|||||||++|||+| |+.||...... .+...
T Consensus 184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~----~~~~~ 259 (308)
T 4gt4_A 184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ----DVVEM 259 (308)
T ss_dssp EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH----HHHHH
T ss_pred EEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHH----HHHHH
Confidence 99999999987644332 22344569999999999999999999999999999999999 89999754422 12222
Q ss_pred HHHhhhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 006907 523 VRTLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVL 580 (626)
Q Consensus 523 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l 580 (626)
+ .... ....+..++..+.+|+.+||+.||++||||+||++.|+.+
T Consensus 260 i---~~~~----------~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 260 I---RNRQ----------VLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp H---HTTC----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred H---HcCC----------CCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 1 1111 1123445667899999999999999999999999999875
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=4.5e-54 Score=438.03 Aligned_cols=264 Identities=29% Similarity=0.438 Sum_probs=207.5
Q ss_pred HhCCCCcCceeccCCCceEEEEEeCCccEEEEEEecCCCcc--cHHHHHHHHHHHHhccCCcccceeeeeecCCceEEEE
Q 006907 301 ATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFT--GEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVY 378 (626)
Q Consensus 301 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 378 (626)
..+++.+.++||+|+||+||+|.+.+ .||||+++..... ..+.|.+|++++++++|||||+++|++.+ +..+|||
T Consensus 34 ~~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVm 110 (307)
T 3omv_A 34 EASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVT 110 (307)
T ss_dssp CTTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEE
T ss_pred cHHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEE
Confidence 44577888999999999999998754 4899998754332 34579999999999999999999998865 5689999
Q ss_pred eecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccCC
Q 006907 379 PYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDR 458 (626)
Q Consensus 379 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~ 458 (626)
|||++|+|.++|+.. ...++|..+..|+.|||.||+|||++ +|+||||||+|||+++++++||+|||+|+....
T Consensus 111 Ey~~gGsL~~~l~~~---~~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~ 184 (307)
T 3omv_A 111 QWCEGSSLYKHLHVQ---ETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR 184 (307)
T ss_dssp ECCSSCBHHHHHHTS---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC---
T ss_pred EcCCCCCHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceeccc
Confidence 999999999999753 34599999999999999999999999 999999999999999999999999999987654
Q ss_pred CCC-ceeeeecccCCccCcccccc---CCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhcccccc
Q 006907 459 RDS-HVTTAVRGTVGHIAPEYLST---GQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDV 534 (626)
Q Consensus 459 ~~~-~~~~~~~gt~~y~aPE~~~~---~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 534 (626)
... .......||+.|||||++.+ +.|+.++|||||||++|||+||+.||...+.... +...+. ....
T Consensus 185 ~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~---~~~~~~---~~~~--- 255 (307)
T 3omv_A 185 WSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ---IIFMVG---RGYA--- 255 (307)
T ss_dssp ---------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH---HHHHHH---TTCC---
T ss_pred CCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHH---HHHHHh---cCCC---
Confidence 322 23345579999999999964 4689999999999999999999999975442211 111111 1100
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccchh
Q 006907 535 LIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEPVT 585 (626)
Q Consensus 535 ~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~~~ 585 (626)
.+.+ ...+..++..+.+|+.+||+.||++||||.||++.|+.+-.+++
T Consensus 256 --~p~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~lp 303 (307)
T 3omv_A 256 --SPDL-SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP 303 (307)
T ss_dssp --CCCS-TTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred --CCCc-ccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccCC
Confidence 0111 12234456789999999999999999999999999988765543
No 5
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.3e-52 Score=436.50 Aligned_cols=271 Identities=25% Similarity=0.358 Sum_probs=221.2
Q ss_pred chHHHHHHhCCCCcCceeccCCCceEEEEEeCC------ccEEEEEEecCCCcc-cHHHHHHHHHHHHhccC-Cccccee
Q 006907 294 SFRELQIATGNFSPKNILGQGGYGVVYKGCLPN------RMVVAVKRLKDPNFT-GEVQFQTEVEMIGLALH-RNLLRLY 365 (626)
Q Consensus 294 ~~~~~~~~~~~f~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h-~nIv~l~ 365 (626)
...++++..++|++.+.||+|+||+||+|.+.+ ++.||||+++..... ..++|.+|++++.+++| ||||+++
T Consensus 55 ~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~ 134 (353)
T 4ase_A 55 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 134 (353)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred CCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEE
Confidence 345677778899999999999999999998532 367999999865543 34579999999999965 8999999
Q ss_pred eeeecC-CceEEEEeecCCCChHHHHhhccC------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCC
Q 006907 366 GFCMTP-EERLLVYPYMPNGSVADCLRDTRQ------------AKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDV 432 (626)
Q Consensus 366 ~~~~~~-~~~~lv~E~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dl 432 (626)
|+|.++ +..++|||||++|+|.++|+.... ....++|..+..++.|||+||+|||++ +||||||
T Consensus 135 g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDL 211 (353)
T 4ase_A 135 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDL 211 (353)
T ss_dssp EEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred EEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCcc
Confidence 999765 568999999999999999976432 134589999999999999999999999 9999999
Q ss_pred CCCcEEeCCCCcEEEeeccCccccCCCCCc-eeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHh-CCCcCCCC
Q 006907 433 KAANILLDESFEAVVGDFGLAKLLDRRDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVG 510 (626)
Q Consensus 433 kp~NILl~~~~~~ki~DfG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~ellt-g~~p~~~~ 510 (626)
||+|||+++++.+||+|||+|+........ ......||+.|||||++.+..|+.++|||||||++|||+| |+.||...
T Consensus 212 K~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~ 291 (353)
T 4ase_A 212 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 291 (353)
T ss_dssp SGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred CccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCC
Confidence 999999999999999999999876544333 3345568999999999999999999999999999999998 89999754
Q ss_pred CcccccccHHHHHHHhhhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccc
Q 006907 511 NGQVQKGMILDCVRTLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEP 583 (626)
Q Consensus 511 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~ 583 (626)
.... .+... ..... +...+...++++.+++.+||+.||++||||.||++.|+.++..
T Consensus 292 ~~~~---~~~~~---i~~g~----------~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~ 348 (353)
T 4ase_A 292 KIDE---EFCRR---LKEGT----------RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 348 (353)
T ss_dssp CCSH---HHHHH---HHHTC----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CHHH---HHHHH---HHcCC----------CCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence 3221 11111 11111 1223334567899999999999999999999999999988653
No 6
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=3.6e-52 Score=429.38 Aligned_cols=250 Identities=20% Similarity=0.305 Sum_probs=209.5
Q ss_pred CCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCCcccHHHHHHHHHHHHhccCCcccceeeeeecCCceEEEEeec
Q 006907 303 GNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPYM 381 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E~~ 381 (626)
..|+..+.||+|+||+||+|... +|+.||||+++.........+.+|+++++.++|||||++++++.+++..|||||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 35888899999999999999864 68999999997655555567899999999999999999999999999999999999
Q ss_pred CCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccCCCCC
Q 006907 382 PNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDS 461 (626)
Q Consensus 382 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~~ 461 (626)
++|+|.+++... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++++||+|||+|+.+.....
T Consensus 154 ~gg~L~~~l~~~-----~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~ 225 (346)
T 4fih_A 154 EGGALTDIVTHT-----RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP 225 (346)
T ss_dssp TTEEHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC
T ss_pred CCCcHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCCCC
Confidence 999999999742 489999999999999999999999 999999999999999999999999999987754332
Q ss_pred ceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccccccccccccC
Q 006907 462 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDRDLK 541 (626)
Q Consensus 462 ~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~ 541 (626)
.....+||+.|||||++.+..|+.++|||||||++|||++|+.||...+... +. ........ + .
T Consensus 226 -~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~----~~---~~i~~~~~------~--~ 289 (346)
T 4fih_A 226 -RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK----AM---KMIRDNLP------P--R 289 (346)
T ss_dssp -CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH----HH---HHHHHSSC------C--C
T ss_pred -cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH----HH---HHHHcCCC------C--C
Confidence 2345679999999999999999999999999999999999999997543221 11 11111110 0 0
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 542 GSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 542 ~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
.......++++.+|+.+||+.||++|||++|+++.
T Consensus 290 ~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 290 LKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp CSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 11122345788999999999999999999999874
No 7
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=3e-52 Score=430.61 Aligned_cols=250 Identities=20% Similarity=0.296 Sum_probs=203.0
Q ss_pred CCCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCCcc--cHHHHHHHHHHHHhccCCcccceeeeeecCCceEEEEe
Q 006907 303 GNFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPNFT--GEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYP 379 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E 379 (626)
++|++.+.||+|+||+||+|.. .+++.||||+++..... ....+.+|++++++++|||||++++++.+++..|||||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 4788999999999999999985 56899999999765433 34568999999999999999999999999999999999
Q ss_pred ecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccCCC
Q 006907 380 YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRR 459 (626)
Q Consensus 380 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~ 459 (626)
||+||+|.++|.... ...+++..+..++.||+.||+|||++ +|+||||||+|||+++++++||+|||+|+.....
T Consensus 104 y~~gg~L~~~i~~~~--~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 178 (350)
T 4b9d_A 104 YCEGGDLFKRINAQK--GVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST 178 (350)
T ss_dssp CCTTCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCHH
T ss_pred CCCCCcHHHHHHHcC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecCC
Confidence 999999999997532 34578999999999999999999999 9999999999999999999999999999876432
Q ss_pred CCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccccccccccc
Q 006907 460 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDRD 539 (626)
Q Consensus 460 ~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 539 (626)
. .......||+.|||||++.+..|+.++|||||||++|||++|+.||...+... ..........
T Consensus 179 ~-~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~-------~~~~i~~~~~-------- 242 (350)
T 4b9d_A 179 V-ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKN-------LVLKIISGSF-------- 242 (350)
T ss_dssp H-HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH-------HHHHHHHTCC--------
T ss_pred c-ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH-------HHHHHHcCCC--------
Confidence 1 12234569999999999999999999999999999999999999997644221 1111111111
Q ss_pred cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006907 540 LKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLK 575 (626)
Q Consensus 540 l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 575 (626)
...+...+.++.+|+.+||+.||++|||++|+++
T Consensus 243 --~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 243 --PPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp --CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1122334578899999999999999999999987
No 8
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=5.8e-52 Score=426.59 Aligned_cols=253 Identities=20% Similarity=0.231 Sum_probs=206.9
Q ss_pred CCCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCCcccHHHHHHHHHHHHhccCCcccceeeeeecCCceEEEEeec
Q 006907 303 GNFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPYM 381 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E~~ 381 (626)
+.|.+.++||+|+||+||+|.. .+|+.||||+++..... .+|+.+++.++|||||++++++.+++..|||||||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~~-----~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 132 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELL 132 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC-----THHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHhH-----HHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEecc
Confidence 4577788999999999999986 45899999999764432 46999999999999999999999999999999999
Q ss_pred CCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCC-cEEEeeccCccccCCCC
Q 006907 382 PNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESF-EAVVGDFGLAKLLDRRD 460 (626)
Q Consensus 382 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~-~~ki~DfG~a~~~~~~~ 460 (626)
+||+|.++|+.. ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++ ++||+|||+|+.+....
T Consensus 133 ~gg~L~~~l~~~----~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~ 205 (336)
T 4g3f_A 133 EGGSLGQLIKQM----GCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDG 205 (336)
T ss_dssp TTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC----
T ss_pred CCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCC
Confidence 999999999764 2599999999999999999999999 999999999999999887 69999999998775432
Q ss_pred Cc----eeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhcccccccc
Q 006907 461 SH----VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLI 536 (626)
Q Consensus 461 ~~----~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 536 (626)
.. .....+||+.|||||++.+..|+.++|||||||++|||++|+.||...+...... ....... ..
T Consensus 206 ~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~---~i~~~~~---~~---- 275 (336)
T 4g3f_A 206 LGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCL---KIASEPP---PI---- 275 (336)
T ss_dssp --------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHH---HHHHSCC---GG----
T ss_pred cccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHH---HHHcCCC---Cc----
Confidence 21 1223569999999999999999999999999999999999999997654332211 1111100 00
Q ss_pred ccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccc
Q 006907 537 DRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVE 582 (626)
Q Consensus 537 ~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~ 582 (626)
...++..++.+.+++.+||+.||++|||+.|+++.|..++.
T Consensus 276 -----~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~ 316 (336)
T 4g3f_A 276 -----REIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQ 316 (336)
T ss_dssp -----GGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -----hhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHh
Confidence 01233455789999999999999999999999998876543
No 9
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=4.4e-52 Score=422.44 Aligned_cols=249 Identities=22% Similarity=0.314 Sum_probs=208.9
Q ss_pred CCCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCC---cccHHHHHHHHHHHHhccCCcccceeeeeecCCceEEEE
Q 006907 303 GNFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPN---FTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVY 378 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 378 (626)
++|++.++||+|+||+||+|.. .+++.||||++.+.. ......+.+|++++++++|||||++++++.+++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 4688999999999999999985 568999999997432 223456899999999999999999999999999999999
Q ss_pred eecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccCC
Q 006907 379 PYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDR 458 (626)
Q Consensus 379 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~ 458 (626)
||++||+|.+++... ..+++..+..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+|+.+..
T Consensus 112 Ey~~gG~L~~~i~~~----~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~ 184 (311)
T 4aw0_A 112 SYAKNGELLKYIRKI----GSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSP 184 (311)
T ss_dssp CCCTTEEHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred ecCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCC
Confidence 999999999999764 2499999999999999999999999 999999999999999999999999999998754
Q ss_pred CCC-ceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccccccccc
Q 006907 459 RDS-HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLID 537 (626)
Q Consensus 459 ~~~-~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 537 (626)
... ......+||+.|||||++.+..|+.++||||+||++|||++|+.||...+.... ... .... .
T Consensus 185 ~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~----~~~---i~~~-~------ 250 (311)
T 4aw0_A 185 ESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLI----FAK---IIKL-E------ 250 (311)
T ss_dssp TTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHH---HHHT-C------
T ss_pred CCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH----HHH---HHcC-C------
Confidence 332 234456799999999999999999999999999999999999999975442211 111 1110 0
Q ss_pred cccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 538 RDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 538 ~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
..++...++++.+|+.+||+.||++|||++|++..
T Consensus 251 ----~~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~ 285 (311)
T 4aw0_A 251 ----YDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGY 285 (311)
T ss_dssp ----CCCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGTCH
T ss_pred ----CCCCcccCHHHHHHHHHHccCCHhHCcChHHHcCC
Confidence 11233345778999999999999999999997553
No 10
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=3.5e-51 Score=419.01 Aligned_cols=267 Identities=22% Similarity=0.316 Sum_probs=201.6
Q ss_pred CCCcCceeccCCCceEEEEEeCCccEEEEEEecCCCcccHHHHHHHHHHHHhccCCcccceeeeeecCC----ceEEEEe
Q 006907 304 NFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPE----ERLLVYP 379 (626)
Q Consensus 304 ~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~----~~~lv~E 379 (626)
+|.+.++||+|+||+||+|.+ +|+.||||+++... .....++.|+..+.+++|||||+++|++.+++ ..+||||
T Consensus 4 ~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~-~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~E 81 (303)
T 3hmm_A 4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE-ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD 81 (303)
T ss_dssp GEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc-hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEec
Confidence 466788999999999999988 57889999996432 11223445666667889999999999998654 4699999
Q ss_pred ecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhc-----CCCCeEecCCCCCcEEeCCCCcEEEeeccCcc
Q 006907 380 YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQ-----CNPKIIHRDVKAANILLDESFEAVVGDFGLAK 454 (626)
Q Consensus 380 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~-----~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~ 454 (626)
||++|+|.++++.. +++|+.+.+++.|++.||+|||++ +.++|+||||||+|||+|+++++||+|||+++
T Consensus 82 y~~~gsL~~~l~~~-----~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~ 156 (303)
T 3hmm_A 82 YHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 156 (303)
T ss_dssp CCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred CCCCCcHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCc
Confidence 99999999999753 489999999999999999999976 35689999999999999999999999999998
Q ss_pred ccCCCCCce---eeeecccCCccCccccccC------CCCccchhHHHHHHHHHHHhCCCcCCCCCccccc--------c
Q 006907 455 LLDRRDSHV---TTAVRGTVGHIAPEYLSTG------QSSEKTDVFGFGVLLLELITGQKALDVGNGQVQK--------G 517 (626)
Q Consensus 455 ~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~--------~ 517 (626)
......... .....||+.|||||++.+. .++.++|||||||++|||+||+.||......... .
T Consensus 157 ~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~ 236 (303)
T 3hmm_A 157 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 236 (303)
T ss_dssp EEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred cccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccc
Confidence 765543322 2235699999999999764 3678999999999999999999887543221110 0
Q ss_pred cHHHHHHHhhhccccccccccccCC-CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccc
Q 006907 518 MILDCVRTLHEERRLDVLIDRDLKG-SFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVE 582 (626)
Q Consensus 518 ~i~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~ 582 (626)
............ . .++.+.. ..+.+.+..+.+|+.+||+.||++||||.||++.|+.+.+
T Consensus 237 ~~~~~~~~~~~~-~----~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~ 297 (303)
T 3hmm_A 237 SVEEMRKVVCEQ-K----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp CHHHHHHHHTTS-C----CCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHhcc-c----CCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence 111111111111 0 1111110 1123567789999999999999999999999999988654
No 11
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=2.9e-50 Score=425.27 Aligned_cols=250 Identities=20% Similarity=0.314 Sum_probs=210.4
Q ss_pred CCCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCCcccHHHHHHHHHHHHhccCCcccceeeeeecCCceEEEEeec
Q 006907 303 GNFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPYM 381 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E~~ 381 (626)
+.|+..+.||+|+||.||+|.. .+|+.||||++..........+.+|+++++.++|||||++++++.+++..|||||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 4588899999999999999986 458999999998666556667899999999999999999999999999999999999
Q ss_pred CCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccCCCCC
Q 006907 382 PNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDS 461 (626)
Q Consensus 382 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~~ 461 (626)
++|+|.++++.. .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.+.....
T Consensus 231 ~gG~L~~~i~~~-----~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~ 302 (423)
T 4fie_A 231 EGGALTDIVTHT-----RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP 302 (423)
T ss_dssp TTEEHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCC
T ss_pred CCCcHHHHHhcc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCCCc
Confidence 999999999742 389999999999999999999999 999999999999999999999999999987754332
Q ss_pred ceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccccccccccccC
Q 006907 462 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDRDLK 541 (626)
Q Consensus 462 ~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~ 541 (626)
.....+||+.|||||++.+..|+.++|||||||++|||++|+.||...+... .......... +.+
T Consensus 303 -~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~-------~~~~i~~~~~------~~~- 367 (423)
T 4fie_A 303 -RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK-------AMKMIRDNLP------PRL- 367 (423)
T ss_dssp -CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-------HHHHHHHSCC------CCC-
T ss_pred -cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH-------HHHHHHcCCC------CCC-
Confidence 2345569999999999999999999999999999999999999997543221 1111111110 001
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 542 GSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 542 ~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
......+.++.+|+.+||+.||++|||++|+++.
T Consensus 368 -~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 368 -KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp -SCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -cccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1122345788999999999999999999999874
No 12
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.8e-50 Score=404.91 Aligned_cols=246 Identities=21% Similarity=0.337 Sum_probs=192.7
Q ss_pred CCCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCCc---ccHHHHHHHHHHHHhccCCcccceeeeeecCCceEEEE
Q 006907 303 GNFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPNF---TGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVY 378 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 378 (626)
++|++.+.||+|+||+||+|.. .+++.||+|+++.... .....+.+|++++++++|||||++++++.+++..|+||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 5799999999999999999985 4689999999975532 23456899999999999999999999999999999999
Q ss_pred eecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccCC
Q 006907 379 PYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDR 458 (626)
Q Consensus 379 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~ 458 (626)
||+ +|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+|||+++++++||+|||+|+....
T Consensus 93 Ey~-~g~L~~~l~~~----~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~ 164 (275)
T 3hyh_A 93 EYA-GNELFDYIVQR----DKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp ECC-CEEHHHHHHHS----CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC-----
T ss_pred eCC-CCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCC
Confidence 999 67999999753 3599999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCceeeeecccCCccCccccccCCC-CccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccccccccc
Q 006907 459 RDSHVTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLID 537 (626)
Q Consensus 459 ~~~~~~~~~~gt~~y~aPE~~~~~~~-t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 537 (626)
.. ......||+.|||||++.+..+ +.++||||+||++|||++|+.||...+... ........ .
T Consensus 165 ~~--~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~-------~~~~i~~~-~------ 228 (275)
T 3hyh_A 165 GN--FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV-------LFKNISNG-V------ 228 (275)
T ss_dssp ------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-------HHHHHHHT-C------
T ss_pred CC--ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHH-------HHHHHHcC-C------
Confidence 32 2334569999999999988775 689999999999999999999997543211 11111111 0
Q ss_pred cccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 538 RDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 538 ~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
..++...++++.+|+.+||+.||++|||++|+++.
T Consensus 229 ----~~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 229 ----YTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp ----CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred ----CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 11223345778999999999999999999999884
No 13
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=5.8e-50 Score=404.79 Aligned_cols=247 Identities=26% Similarity=0.412 Sum_probs=196.5
Q ss_pred CcCceeccCCCceEEEEEeC-CccEEEEEEecCCCc--ccHHHHHHHHHHHHhccCCcccceeeeeec----CCceEEEE
Q 006907 306 SPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNF--TGEVQFQTEVEMIGLALHRNLLRLYGFCMT----PEERLLVY 378 (626)
Q Consensus 306 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~----~~~~~lv~ 378 (626)
...+.||+|+||+||+|... ++..||+|++..... .....|.+|++++++++|||||++++++.+ +...+|||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 45678999999999999864 588999999975432 234568999999999999999999999865 34579999
Q ss_pred eecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeC-CCCcEEEeeccCccccC
Q 006907 379 PYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLD-ESFEAVVGDFGLAKLLD 457 (626)
Q Consensus 379 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~-~~~~~ki~DfG~a~~~~ 457 (626)
|||++|+|.+++... ..+++..+..++.||+.||+|||++ +++|+||||||+|||++ .++.+||+|||+|+...
T Consensus 109 Ey~~gg~L~~~l~~~----~~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~ 183 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRF----KVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp ECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred eCCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCEeCC
Confidence 999999999999764 3589999999999999999999998 22399999999999998 47899999999998643
Q ss_pred CCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccccccccc
Q 006907 458 RRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLID 537 (626)
Q Consensus 458 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 537 (626)
. .......||+.|||||++.+ .|+.++|||||||++|||+||+.||....... .............
T Consensus 184 ~---~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~------~~~~~i~~~~~~~---- 249 (290)
T 3fpq_A 184 A---SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAA------QIYRRVTSGVKPA---- 249 (290)
T ss_dssp T---TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHH------HHHHHHTTTCCCG----
T ss_pred C---CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHH------HHHHHHHcCCCCC----
Confidence 2 23345679999999999865 69999999999999999999999997543211 1111111111100
Q ss_pred cccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 538 RDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 538 ~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
.++...++++.+|+.+||+.||++|||++|+++.
T Consensus 250 -----~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 250 -----SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp -----GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred -----CCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0111223578899999999999999999999874
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=5.1e-51 Score=414.59 Aligned_cols=247 Identities=23% Similarity=0.289 Sum_probs=197.5
Q ss_pred CCCCcCceeccCCCceEEEEEe----CCccEEEEEEecCCCc--ccHHHHHHHHHHHHhccCCcccceeeeeecCCceEE
Q 006907 303 GNFSPKNILGQGGYGVVYKGCL----PNRMVVAVKRLKDPNF--TGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLL 376 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 376 (626)
++|++.+.||+|+||+||+|+. ..++.||+|+++.... .....+.+|++++++++|||||++++++.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 4689999999999999999975 2467899999975432 223468889999999999999999999999999999
Q ss_pred EEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCcccc
Q 006907 377 VYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL 456 (626)
Q Consensus 377 v~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~ 456 (626)
||||++||+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+|||+++++++||+|||+|+..
T Consensus 104 vmEy~~gg~L~~~l~~~~----~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~ 176 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEV----MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKES 176 (304)
T ss_dssp EECCCTTCEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC-
T ss_pred EEEcCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceec
Confidence 999999999999997642 599999999999999999999999 9999999999999999999999999999865
Q ss_pred CCCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhcccccccc
Q 006907 457 DRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLI 536 (626)
Q Consensus 457 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 536 (626)
..... ......||+.|||||++.+..|+.++||||+||++|||++|+.||...+.... ....... .
T Consensus 177 ~~~~~-~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~-------~~~i~~~-~----- 242 (304)
T 3ubd_A 177 IDHEK-KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKET-------MTMILKA-K----- 242 (304)
T ss_dssp ----C-CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-------HHHHHHC-C-----
T ss_pred cCCCc-cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHH-------HHHHHcC-C-----
Confidence 43322 23345699999999999999999999999999999999999999986442221 1111111 0
Q ss_pred ccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCH-----HHHHH
Q 006907 537 DRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKM-----SEVLK 575 (626)
Q Consensus 537 ~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~-----~evl~ 575 (626)
..++...++++.+|+.+||+.||++|||+ +|+++
T Consensus 243 -----~~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 243 -----LGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp -----CCCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred -----CCCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 12233445788999999999999999985 56654
No 15
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=7.7e-48 Score=399.36 Aligned_cols=297 Identities=67% Similarity=1.099 Sum_probs=256.7
Q ss_pred ccccCcccccchHHHHHHhCCCCcCceeccCCCceEEEEEeCCccEEEEEEecCCCcc-cHHHHHHHHHHHHhccCCccc
Q 006907 284 EFDVGHLKRFSFRELQIATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFT-GEVQFQTEVEMIGLALHRNLL 362 (626)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv 362 (626)
....+.+.++++.+++..+++|.+.+.||+|+||.||+|...+++.||||+++..... ....+.+|+++++.++||||+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv 90 (326)
T 3uim_A 11 EVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLL 90 (326)
T ss_dssp ----CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBC
T ss_pred ccccCccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCcc
Confidence 3445667889999999999999999999999999999999888999999999765432 234689999999999999999
Q ss_pred ceeeeeecCCceEEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCC
Q 006907 363 RLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDES 442 (626)
Q Consensus 363 ~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~ 442 (626)
++++++.++...++||||+++|+|.+++.........+++..+..++.|++.||+|||+++.++|+||||||+||+++++
T Consensus 91 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~ 170 (326)
T 3uim_A 91 RLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEE 170 (326)
T ss_dssp CCCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTT
T ss_pred ceEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCC
Confidence 99999999999999999999999999998766666679999999999999999999999888899999999999999999
Q ss_pred CcEEEeeccCccccCCCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCC-cccccccHHH
Q 006907 443 FEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGN-GQVQKGMILD 521 (626)
Q Consensus 443 ~~~ki~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~-~~~~~~~i~~ 521 (626)
+.+||+|||++...............||+.|+|||++.+..++.++||||||+++|||++|+.||+... .........+
T Consensus 171 ~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~ 250 (326)
T 3uim_A 171 FEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLD 250 (326)
T ss_dssp CCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHH
T ss_pred CCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHH
Confidence 999999999998876555555556669999999999998899999999999999999999999996322 1122334556
Q ss_pred HHHHhhhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 006907 522 CVRTLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVL 580 (626)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l 580 (626)
++.............+......++...+..+.+++.+||+.||++|||+.||++.|++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~ 309 (326)
T 3uim_A 251 WVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309 (326)
T ss_dssp HHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred HHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence 77666667777777788888888999999999999999999999999999999999863
No 16
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=2.8e-48 Score=395.77 Aligned_cols=250 Identities=22% Similarity=0.366 Sum_probs=188.4
Q ss_pred CCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCCcc-cHHHHHHHHHHHHhccCCcccceeeeeecCCc--------
Q 006907 304 NFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPNFT-GEVQFQTEVEMIGLALHRNLLRLYGFCMTPEE-------- 373 (626)
Q Consensus 304 ~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~-------- 373 (626)
+|++.+.||+|+||+||+|.. .+++.||||+++..... ....+.+|++++++++|||||++++++.+.+.
T Consensus 6 dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~ 85 (299)
T 4g31_A 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSS 85 (299)
T ss_dssp HEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC---------
T ss_pred hCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccC
Confidence 588899999999999999986 46889999999754433 34568999999999999999999999875442
Q ss_pred ----eEEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEee
Q 006907 374 ----RLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGD 449 (626)
Q Consensus 374 ----~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~D 449 (626)
.|+||||+++|+|.+++.... .....++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|
T Consensus 86 ~~~~l~ivmE~~~gg~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 86 PKVYLYIQMQLCRKENLKDWMNGRC-TIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp -CEEEEEEEECCCSCCHHHHHHTCC-SGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC
T ss_pred CCcEEEEEEecCCCCcHHHHHHhcC-CCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEcc
Confidence 689999999999999997532 223457788899999999999999999 999999999999999999999999
Q ss_pred ccCccccCCCCCc-----------eeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCccccccc
Q 006907 450 FGLAKLLDRRDSH-----------VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGM 518 (626)
Q Consensus 450 fG~a~~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~ 518 (626)
||+|+........ .....+||+.|||||++.+..|+.++|||||||++|||++ ||.... .
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~---~--- 232 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM---E--- 232 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH---H---
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc---H---
Confidence 9999876543221 1233469999999999999999999999999999999996 775211 0
Q ss_pred HHHHHHHhhhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 519 ILDCVRTLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 519 i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
............. ........+.+.+|+.+||+.||++|||+.|+++.
T Consensus 233 ~~~~~~~~~~~~~----------p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 233 RVRTLTDVRNLKF----------PPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp HHHHHHHHHTTCC----------CHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHHhcCCC----------CCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 0111111111000 00112334567889999999999999999999873
No 17
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.9e-48 Score=408.92 Aligned_cols=266 Identities=21% Similarity=0.279 Sum_probs=205.4
Q ss_pred CCCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCCcc--cHHHHHHHHHHHHhccCCcccceeeeeec------CCc
Q 006907 303 GNFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPNFT--GEVQFQTEVEMIGLALHRNLLRLYGFCMT------PEE 373 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~------~~~ 373 (626)
++|++.+.||+|+||+||+|.. .+|+.||||+++..... ..+.+.+|+++|+.++|||||++++++.. ...
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 5688999999999999999986 56899999999765432 33568899999999999999999998754 357
Q ss_pred eEEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCc
Q 006907 374 RLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLA 453 (626)
Q Consensus 374 ~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a 453 (626)
.|||||||+ |+|.+++.. ...+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+|
T Consensus 134 ~~ivmE~~~-g~L~~~i~~----~~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla 205 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHS----SQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMA 205 (398)
T ss_dssp EEEEEECCS-EEHHHHHTS----SSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEeCCC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeeccee
Confidence 799999996 689999965 34699999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCC---CceeeeecccCCccCccccccC-CCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhc
Q 006907 454 KLLDRRD---SHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEE 529 (626)
Q Consensus 454 ~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~-~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~ 529 (626)
+.+.... .......+||+.|||||++.+. .++.++||||+||++|||++|+.||.+.+...+...|..........
T Consensus 206 ~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~ 285 (398)
T 4b99_A 206 RGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPA 285 (398)
T ss_dssp BCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGG
T ss_pred eecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChH
Confidence 8764321 1223446799999999998775 56999999999999999999999998766544444443333222111
Q ss_pred ccccccc------cccc--CCCCC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 530 RRLDVLI------DRDL--KGSFD-----PTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 530 ~~~~~~~------~~~l--~~~~~-----~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
....... ...+ ....+ +..++++.+|+.+||+.||++|||++|+++.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 286 VIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp GTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred HhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 1000000 0000 00000 1234678899999999999999999999884
No 18
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=3.5e-46 Score=386.14 Aligned_cols=284 Identities=37% Similarity=0.637 Sum_probs=242.2
Q ss_pred hHHHHHHhCCCCcCceeccCCCceEEEEEeCCccEEEEEEecCCCcccHHHHHHHHHHHHhccCCcccceeeeeecCCce
Q 006907 295 FRELQIATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEER 374 (626)
Q Consensus 295 ~~~~~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 374 (626)
+.++...+++|...+.||+|+||.||+|...+++.||+|++..........+.+|+++++.++||||+++++++.+.+..
T Consensus 31 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 110 (321)
T 2qkw_B 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEM 110 (321)
T ss_dssp CSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCC
T ss_pred HHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeE
Confidence 34445577899999999999999999999888999999998876655567899999999999999999999999999999
Q ss_pred EEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCcc
Q 006907 375 LLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAK 454 (626)
Q Consensus 375 ~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~ 454 (626)
++||||+++|+|.+++.........++|..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||++.
T Consensus 111 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~ 187 (321)
T 2qkw_B 111 ILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISK 187 (321)
T ss_dssp EEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCTTCE
T ss_pred EEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeeccccc
Confidence 999999999999999976554455699999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCC-CceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccccc
Q 006907 455 LLDRRD-SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLD 533 (626)
Q Consensus 455 ~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~ 533 (626)
...... ........||+.|+|||.+.+..++.++||||||+++|||++|+.||........ .....|...........
T Consensus 188 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~ 266 (321)
T 2qkw_B 188 KGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREM-VNLAEWAVESHNNGQLE 266 (321)
T ss_dssp ECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSC-CCHHHHTHHHHTTTCCC
T ss_pred ccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHH-HHHHHHhhhccccccHH
Confidence 654322 2223344589999999999999999999999999999999999999986543322 23444544444555566
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccc
Q 006907 534 VLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVE 582 (626)
Q Consensus 534 ~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~ 582 (626)
...++......+++.+..+.+++.+||+.||++|||+.|+++.|+.+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~ 315 (321)
T 2qkw_B 267 QIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR 315 (321)
T ss_dssp SSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhh
Confidence 6677777777888999999999999999999999999999999998764
No 19
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=3.1e-46 Score=390.89 Aligned_cols=264 Identities=20% Similarity=0.282 Sum_probs=201.0
Q ss_pred HhCCCCcCceeccCCCceEEEEEeC----CccEEEEEEecCCCcccHHHHHHHHHHHHhc-cCCcccceeeeeecCCceE
Q 006907 301 ATGNFSPKNILGQGGYGVVYKGCLP----NRMVVAVKRLKDPNFTGEVQFQTEVEMIGLA-LHRNLLRLYGFCMTPEERL 375 (626)
Q Consensus 301 ~~~~f~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~ 375 (626)
..+.|++.++||+|+||+||+|... .++.||+|++.... ...++.+|+++++.+ +|||||++++++.+.+..+
T Consensus 19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~ 96 (361)
T 4f9c_A 19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVV 96 (361)
T ss_dssp GGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEE
T ss_pred ccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEE
Confidence 4578999999999999999999742 46789999986543 345678999999988 6999999999999999999
Q ss_pred EEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCC-CcEEEeeccCcc
Q 006907 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDES-FEAVVGDFGLAK 454 (626)
Q Consensus 376 lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~-~~~ki~DfG~a~ 454 (626)
+||||+++|+|.+++. .+++..+..++.|++.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+
T Consensus 97 lvmE~~~g~~L~~~~~-------~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFGla~ 166 (361)
T 4f9c_A 97 IAMPYLEHESFLDILN-------SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLAQ 166 (361)
T ss_dssp EEEECCCCCCHHHHHT-------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEEeCCCcccHHHHHc-------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCCCCc
Confidence 9999999999999984 289999999999999999999999 99999999999999876 799999999997
Q ss_pred ccCCCCC---------------------------ceeeeecccCCccCccccccC-CCCccchhHHHHHHHHHHHhCCCc
Q 006907 455 LLDRRDS---------------------------HVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGVLLLELITGQKA 506 (626)
Q Consensus 455 ~~~~~~~---------------------------~~~~~~~gt~~y~aPE~~~~~-~~t~~~DvwSlGvil~elltg~~p 506 (626)
....... ......+||+.|+|||++.+. .++.++||||+||++|||++|+.|
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~P 246 (361)
T 4f9c_A 167 GTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYP 246 (361)
T ss_dssp ECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSS
T ss_pred ccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCC
Confidence 6543211 112234699999999999775 589999999999999999999999
Q ss_pred CCCCCcc-cccccHHHHHHHhhhccc---cc---------------cc---------ccccc---------CCCCCHHHH
Q 006907 507 LDVGNGQ-VQKGMILDCVRTLHEERR---LD---------------VL---------IDRDL---------KGSFDPTEL 549 (626)
Q Consensus 507 ~~~~~~~-~~~~~i~~~~~~~~~~~~---~~---------------~~---------~~~~l---------~~~~~~~~~ 549 (626)
|...... ++...+....+....... .. .. ..+.. ........+
T Consensus 247 f~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is 326 (361)
T 4f9c_A 247 FYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVP 326 (361)
T ss_dssp SSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCC
T ss_pred CCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCC
Confidence 9754432 222222221111000000 00 00 00000 000111234
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 550 EKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 550 ~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
+++.+|+.+||+.||++|||++|+++.
T Consensus 327 ~~a~DLl~~lL~~dP~~R~ta~eaL~H 353 (361)
T 4f9c_A 327 DEAYDLLDKLLDLNPASRITAEEALLH 353 (361)
T ss_dssp HHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred HHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 678899999999999999999999875
No 20
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=4.5e-45 Score=402.40 Aligned_cols=249 Identities=23% Similarity=0.279 Sum_probs=200.3
Q ss_pred hCCCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCCc---ccHHHHHH---HHHHHHhccCCcccceeeeeecCCce
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPNF---TGEVQFQT---EVEMIGLALHRNLLRLYGFCMTPEER 374 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~---E~~~l~~l~h~nIv~l~~~~~~~~~~ 374 (626)
-++|++.++||+|+||+||+|.. .+|+.||+|++++... .......+ ++.+++.++|||||++++++.+.+..
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 35689999999999999999986 4589999999964321 12223333 45666677899999999999999999
Q ss_pred EEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCcc
Q 006907 375 LLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAK 454 (626)
Q Consensus 375 ~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~ 454 (626)
|+||||++||+|.++|... ..+++..+..++.||+.||+|||++ +||||||||+|||++.+|++||+|||+|+
T Consensus 268 ylVmEy~~GGdL~~~l~~~----~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~ 340 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQH----GVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLAC 340 (689)
T ss_dssp EEEECCCCSCBHHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEEecCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceee
Confidence 9999999999999999764 3599999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCceeeeecccCCccCcccccc-CCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccccc
Q 006907 455 LLDRRDSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLD 533 (626)
Q Consensus 455 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~ 533 (626)
.+.... ....+||+.|||||++.+ ..|+.++||||+||++|||++|+.||......... .+.... ...
T Consensus 341 ~~~~~~---~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~-~i~~~i---~~~---- 409 (689)
T 3v5w_A 341 DFSKKK---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH-EIDRMT---LTM---- 409 (689)
T ss_dssp ECSSCC---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHH-HHHHHH---HHC----
T ss_pred ecCCCC---CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH-HHHHhh---cCC----
Confidence 765432 234579999999999975 57999999999999999999999999754322211 111111 100
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 006907 534 VLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPK-----MSEVLK 575 (626)
Q Consensus 534 ~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs-----~~evl~ 575 (626)
...++...++++.+|+.+||+.||++|++ ++||++
T Consensus 410 -------~~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 410 -------AVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp -------CCCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred -------CCCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 11223344578899999999999999998 678776
No 21
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=4.3e-45 Score=404.87 Aligned_cols=252 Identities=21% Similarity=0.313 Sum_probs=209.8
Q ss_pred CCCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCCcccHHHHHHHHHHHHhccCCcccceeeeeecCCceEEEEeec
Q 006907 303 GNFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPYM 381 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E~~ 381 (626)
++|++.+.||+|+||.||+|.. .+|+.||+|++..........+.+|+++|+.++|||||++++++.++...++|||||
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~ 236 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM 236 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeec
Confidence 5788999999999999999986 468999999998776666667899999999999999999999999999999999999
Q ss_pred CCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCC--CcEEEeeccCccccCCC
Q 006907 382 PNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDES--FEAVVGDFGLAKLLDRR 459 (626)
Q Consensus 382 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~--~~~ki~DfG~a~~~~~~ 459 (626)
++|+|.++|... ...+++..+..++.||+.||.|||++ +|+||||||+|||++.+ +.+||+|||+++.+...
T Consensus 237 ~gg~L~~~i~~~---~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~ 310 (573)
T 3uto_A 237 SGGELFEKVADE---HNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK 310 (573)
T ss_dssp CCCBHHHHHTCT---TSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT
T ss_pred CCCcHHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEccCC
Confidence 999999999642 33589999999999999999999999 99999999999999854 89999999999987643
Q ss_pred CCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccccccccccc
Q 006907 460 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDRD 539 (626)
Q Consensus 460 ~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 539 (626)
. ......||+.|||||++.+..|+.++||||+||++|||++|+.||.+.+.... ......... .....
T Consensus 311 ~--~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~-------~~~i~~~~~---~~~~~ 378 (573)
T 3uto_A 311 Q--SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDET-------LRNVKSCDW---NMDDS 378 (573)
T ss_dssp S--EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH-------HHHHHTTCC---CCCSG
T ss_pred C--ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH-------HHHHHhCCC---CCCcc
Confidence 3 33445799999999999999999999999999999999999999986543221 111111100 00011
Q ss_pred cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 540 LKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 540 l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
. ....+.++.+|+.+||+.||++|||+.|+++.
T Consensus 379 ~----~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 379 A----FSGISEDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp G----GTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred c----ccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1 12234678899999999999999999999883
No 22
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=3.6e-44 Score=369.08 Aligned_cols=269 Identities=28% Similarity=0.445 Sum_probs=206.9
Q ss_pred HHHHHhCCCCcCceeccCCCceEEEEEeCCccEEEEEEecCCCccc--HHHHHHHHHHHHhccCCcccceeeeeecCCce
Q 006907 297 ELQIATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTG--EVQFQTEVEMIGLALHRNLLRLYGFCMTPEER 374 (626)
Q Consensus 297 ~~~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 374 (626)
++.+..++|++.+.||+|+||+||+|.. ++..||||++....... ...+.+|++++++++||||+++++++.+....
T Consensus 31 ~~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 109 (309)
T 3p86_A 31 DMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNL 109 (309)
T ss_dssp -CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCC
T ss_pred cccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCce
Confidence 3344566788999999999999999977 57789999997655332 34688999999999999999999999999999
Q ss_pred EEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCcEEeCCCCcEEEeeccC
Q 006907 375 LLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPK--IIHRDVKAANILLDESFEAVVGDFGL 452 (626)
Q Consensus 375 ~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~--ivH~Dlkp~NILl~~~~~~ki~DfG~ 452 (626)
++||||+++|+|.+++.... ....+++..+..++.|++.||+|||+. + |+||||||+||+++.++.+||+|||+
T Consensus 110 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~ 185 (309)
T 3p86_A 110 SIVTEYLSRGSLYRLLHKSG-AREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGL 185 (309)
T ss_dssp EEEEECCTTCBHHHHHHSTT-HHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC-
T ss_pred EEEEecCCCCcHHHHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCC
Confidence 99999999999999997521 122389999999999999999999999 7 99999999999999999999999999
Q ss_pred ccccCCCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhcccc
Q 006907 453 AKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRL 532 (626)
Q Consensus 453 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~ 532 (626)
+....... .......||+.|+|||.+.+..++.++||||||+++|||++|+.||....... ....... .
T Consensus 186 a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~----~~~~~~~---~--- 254 (309)
T 3p86_A 186 SRLKASTF-LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQ----VVAAVGF---K--- 254 (309)
T ss_dssp -----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHH----HHHHHHH---S---
T ss_pred Cccccccc-cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHh---c---
Confidence 97644322 22234558999999999999999999999999999999999999997543211 1111110 0
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccchhhh
Q 006907 533 DVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEPVTEE 587 (626)
Q Consensus 533 ~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~~~~~ 587 (626)
......+...+..+.+++.+||+.||++|||++|+++.|+.++.....+
T Consensus 255 ------~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p~ 303 (309)
T 3p86_A 255 ------CKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPP 303 (309)
T ss_dssp ------CCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-----
T ss_pred ------CCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCCCC
Confidence 0111223344577999999999999999999999999999988764433
No 23
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=2.5e-42 Score=354.62 Aligned_cols=283 Identities=40% Similarity=0.659 Sum_probs=230.3
Q ss_pred cccccchHHHHHHhCCCCcC------ceeccCCCceEEEEEeCCccEEEEEEecCCC----cccHHHHHHHHHHHHhccC
Q 006907 289 HLKRFSFRELQIATGNFSPK------NILGQGGYGVVYKGCLPNRMVVAVKRLKDPN----FTGEVQFQTEVEMIGLALH 358 (626)
Q Consensus 289 ~~~~~~~~~~~~~~~~f~~~------~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h 358 (626)
....|++.++..++++|... +.||+|+||.||+|.. +++.||+|++.... ......+.+|+++++.++|
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence 34678999999999999887 8999999999999987 57789999987532 1224568999999999999
Q ss_pred CcccceeeeeecCCceEEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEE
Q 006907 359 RNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANIL 438 (626)
Q Consensus 359 ~nIv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIL 438 (626)
|||+++++++.+.+..++||||+++++|.+++.... ...++++..+..++.|++.||.|||+. +|+||||||+||+
T Consensus 90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil 165 (307)
T 2nru_A 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD-GTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANIL 165 (307)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGG-GCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEE
T ss_pred CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhcc-CCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEE
Confidence 999999999999999999999999999999997532 245699999999999999999999999 9999999999999
Q ss_pred eCCCCcEEEeeccCccccCCCCCc-eeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccc
Q 006907 439 LDESFEAVVGDFGLAKLLDRRDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKG 517 (626)
Q Consensus 439 l~~~~~~ki~DfG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~ 517 (626)
+++++.+||+|||++......... ......||+.|+|||.+.+ .++.++||||||+++|+|++|+.||..........
T Consensus 166 i~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~ 244 (307)
T 2nru_A 166 LDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLL 244 (307)
T ss_dssp ECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTT
T ss_pred EcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHH
Confidence 999999999999999876543222 2234468999999998864 58899999999999999999999998654433222
Q ss_pred cHHHHHHHhhh-ccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcc
Q 006907 518 MILDCVRTLHE-ERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLV 581 (626)
Q Consensus 518 ~i~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~ 581 (626)
.+. ..... .......+++.+ ...+...+..+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 245 ~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~ 305 (307)
T 2nru_A 245 DIK---EEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305 (307)
T ss_dssp HHH---HHHHTTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred HHH---HHhhhhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 222 21111 111222233332 3456778899999999999999999999999999998864
No 24
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.8e-43 Score=363.94 Aligned_cols=260 Identities=25% Similarity=0.398 Sum_probs=213.2
Q ss_pred CCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCCcccHHHHHHHHHHHHhccCCcccceeeeeecCCceEEEEeec
Q 006907 303 GNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPYM 381 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E~~ 381 (626)
++|.+.++||+|+||+||+|... +++.||+|++..........+.+|+++++.++||||+++++++.+++..++||||+
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 89 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYI 89 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEec
Confidence 46778899999999999999864 58899999997765556678999999999999999999999999999999999999
Q ss_pred CCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccCCCCC
Q 006907 382 PNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDS 461 (626)
Q Consensus 382 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~~ 461 (626)
++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++........
T Consensus 90 ~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 163 (310)
T 3s95_A 90 KGGTLRGIIKSM---DSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKT 163 (310)
T ss_dssp TTCBHHHHHHHC---CTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC----
T ss_pred CCCcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceecccccc
Confidence 999999999763 23589999999999999999999999 999999999999999999999999999987644322
Q ss_pred ce-------------eeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCccccc--ccHHHHHHHh
Q 006907 462 HV-------------TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQK--GMILDCVRTL 526 (626)
Q Consensus 462 ~~-------------~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~--~~i~~~~~~~ 526 (626)
.. .....||+.|+|||++.+..++.++||||||+++|||++|..|+......... .........
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~- 242 (310)
T 3s95_A 164 QPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDR- 242 (310)
T ss_dssp ----------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHH-
T ss_pred cccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccccc-
Confidence 11 11346899999999999999999999999999999999999998753322111 111111111
Q ss_pred hhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccchh
Q 006907 527 HEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEPVT 585 (626)
Q Consensus 527 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~~~ 585 (626)
..+...+..+.+++.+||+.||++|||+.|+++.|+.+...+.
T Consensus 243 ----------------~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~ 285 (310)
T 3s95_A 243 ----------------YCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLA 285 (310)
T ss_dssp ----------------TCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred ----------------cCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcc
Confidence 0112233568899999999999999999999999998765543
No 25
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=3.6e-43 Score=359.54 Aligned_cols=251 Identities=20% Similarity=0.303 Sum_probs=209.6
Q ss_pred hCCCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCCcccHHHHHHHHHHHHhccCCcccceeeeeecCCceEEEEee
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPY 380 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E~ 380 (626)
.++|.+.+.||+|+||+||+|.. .+++.||+|++..........+.+|+.+++.++||||+++++++..++..++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 35789999999999999999985 56889999999765555567789999999999999999999999999999999999
Q ss_pred cCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccCCCC
Q 006907 381 MPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRD 460 (626)
Q Consensus 381 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~ 460 (626)
+++|+|.+++... .+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||++.......
T Consensus 99 ~~~~~L~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 170 (297)
T 3fxz_A 99 LAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 170 (297)
T ss_dssp CTTCBHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred CCCCCHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCCcc
Confidence 9999999999753 489999999999999999999999 99999999999999999999999999998765443
Q ss_pred CceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhcccccccccccc
Q 006907 461 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDRDL 540 (626)
Q Consensus 461 ~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l 540 (626)
. ......||+.|+|||.+.+..++.++||||||+++|||++|+.||...+.... ..........
T Consensus 171 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-------~~~~~~~~~~-------- 234 (297)
T 3fxz_A 171 S-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA-------LYLIATNGTP-------- 234 (297)
T ss_dssp C-CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-------HHHHHHHCSC--------
T ss_pred c-ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-------HHHHHhCCCC--------
Confidence 3 23345699999999999999999999999999999999999999975432111 1111111110
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 541 KGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 541 ~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
....+...+..+.+++.+||+.||++|||++|+++.
T Consensus 235 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 235 ELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp CCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CCCCccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 011123345778999999999999999999999884
No 26
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=3e-43 Score=371.40 Aligned_cols=263 Identities=26% Similarity=0.408 Sum_probs=214.5
Q ss_pred hCCCCcCceeccCCCceEEEEEe--------CCccEEEEEEecCCCcc-cHHHHHHHHHHHHhc-cCCcccceeeeeecC
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCL--------PNRMVVAVKRLKDPNFT-GEVQFQTEVEMIGLA-LHRNLLRLYGFCMTP 371 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~ 371 (626)
.++|.+.+.||+|+||.||+|.. .++..||||+++..... ....+.+|+++++.+ +||||+++++++.+.
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 35688899999999999999975 23567999999765432 335689999999999 899999999999999
Q ss_pred CceEEEEeecCCCChHHHHhhccC------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe
Q 006907 372 EERLLVYPYMPNGSVADCLRDTRQ------------AKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILL 439 (626)
Q Consensus 372 ~~~~lv~E~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl 439 (626)
+..++||||+++|+|.+++..... ....+++..+..++.|++.||+|||++ +|+||||||+|||+
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEEE
Confidence 999999999999999999986432 123589999999999999999999999 99999999999999
Q ss_pred CCCCcEEEeeccCccccCCCCCc-eeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHh-CCCcCCCCCcccccc
Q 006907 440 DESFEAVVGDFGLAKLLDRRDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNGQVQKG 517 (626)
Q Consensus 440 ~~~~~~ki~DfG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~ 517 (626)
+.++.+||+|||++......... ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||.......
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~--- 313 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--- 313 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHH---
Confidence 99999999999999866543322 1223347889999999999999999999999999999999 999997543221
Q ss_pred cHHHHHHHhhhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccch
Q 006907 518 MILDCVRTLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEPV 584 (626)
Q Consensus 518 ~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~~ 584 (626)
+...+ ... .....+...+..+.+++.+||+.||++|||+.|+++.|+.++...
T Consensus 314 -~~~~~---~~~----------~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~ 366 (370)
T 2psq_A 314 -LFKLL---KEG----------HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT 366 (370)
T ss_dssp -HHHHH---HTT----------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred -HHHHH---hcC----------CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence 11111 111 111223345578999999999999999999999999999987643
No 27
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3e-43 Score=354.55 Aligned_cols=257 Identities=26% Similarity=0.448 Sum_probs=213.4
Q ss_pred hCCCCcCceeccCCCceEEEEEeCCccEEEEEEecCCCcccHHHHHHHHHHHHhccCCcccceeeeeecCCceEEEEeec
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPYM 381 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E~~ 381 (626)
.++|.+.+.||+|+||.||+|...++..||+|+++... ....++.+|++++++++||||+++++++.+....++||||+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 87 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence 35678889999999999999998888889999998654 33567899999999999999999999999999999999999
Q ss_pred CCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccCCCCC
Q 006907 382 PNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDS 461 (626)
Q Consensus 382 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~~ 461 (626)
++++|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 88 ~~~~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 161 (269)
T 4hcu_A 88 EHGCLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 161 (269)
T ss_dssp TTCBHHHHHHTT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHH
T ss_pred CCCcHHHHHHhc---CcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEecccccccccccccc
Confidence 999999999753 33589999999999999999999999 999999999999999999999999999986644322
Q ss_pred ceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHh-CCCcCCCCCcccccccHHHHHHHhhhcccccccccccc
Q 006907 462 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDRDL 540 (626)
Q Consensus 462 ~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l 540 (626)
.......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||....... ........ .
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~-------~~~~~~~~----------~ 224 (269)
T 4hcu_A 162 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE-------VVEDISTG----------F 224 (269)
T ss_dssp HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-------HHHHHHTT----------C
T ss_pred ccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHH-------HHHHHhcC----------c
Confidence 22233446788999999999999999999999999999999 999997543221 11111111 0
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccc
Q 006907 541 KGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVE 582 (626)
Q Consensus 541 ~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~ 582 (626)
....+...+..+.+++.+||+.||++|||++|+++.|+++.+
T Consensus 225 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~ 266 (269)
T 4hcu_A 225 RLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 266 (269)
T ss_dssp CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence 111122235778999999999999999999999999998764
No 28
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=7.3e-43 Score=351.40 Aligned_cols=258 Identities=25% Similarity=0.413 Sum_probs=214.5
Q ss_pred hCCCCcCceeccCCCceEEEEEeCCccEEEEEEecCCCcccHHHHHHHHHHHHhccCCcccceeeeeecCCceEEEEeec
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPYM 381 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E~~ 381 (626)
.++|.+.+.||+|+||.||+|...++..||+|+++.... ...++.+|++++++++||||+++++++.+....++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI 85 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence 456888999999999999999988888899999976543 3567899999999999999999999999999999999999
Q ss_pred CCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccCCCCC
Q 006907 382 PNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDS 461 (626)
Q Consensus 382 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~~ 461 (626)
++++|.+++.... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 86 ~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 159 (268)
T 3sxs_A 86 SNGCLLNYLRSHG---KGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY 159 (268)
T ss_dssp TTCBHHHHHHHHG---GGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCE
T ss_pred CCCcHHHHHHHcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchhhh
Confidence 9999999997642 2489999999999999999999999 999999999999999999999999999987655443
Q ss_pred ceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHh-CCCcCCCCCcccccccHHHHHHHhhhcccccccccccc
Q 006907 462 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDRDL 540 (626)
Q Consensus 462 ~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l 540 (626)
.......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||....... .........
T Consensus 160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-------~~~~~~~~~---------- 222 (268)
T 3sxs_A 160 VSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE-------VVLKVSQGH---------- 222 (268)
T ss_dssp EECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHH-------HHHHHHTTC----------
T ss_pred hcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHH-------HHHHHHcCC----------
Confidence 33344446778999999998889999999999999999999 999997544221 111111111
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccc
Q 006907 541 KGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEP 583 (626)
Q Consensus 541 ~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~ 583 (626)
....+...++.+.+++.+||+.||++|||+.|+++.|+.+.+.
T Consensus 223 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 223 RLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp CCCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred CCCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 0111222346789999999999999999999999999987654
No 29
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=4.4e-43 Score=363.62 Aligned_cols=259 Identities=27% Similarity=0.430 Sum_probs=210.6
Q ss_pred hCCCCcCceeccCCCceEEEEEeC----CccEEEEEEecCCCc-ccHHHHHHHHHHHHhccCCcccceeeeeecCCceEE
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCLP----NRMVVAVKRLKDPNF-TGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLL 376 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 376 (626)
.++|.+.+.||+|+||.||+|... .+..||||+++.... .....+.+|+++++.++||||+++++++.++...++
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 127 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence 346788899999999999999873 355799999986533 334578999999999999999999999999999999
Q ss_pred EEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCcccc
Q 006907 377 VYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL 456 (626)
Q Consensus 377 v~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~ 456 (626)
||||+++|+|.++++.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 128 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 201 (325)
T 3kul_A 128 VTEYMENGSLDTFLRTH---DGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVL 201 (325)
T ss_dssp EEECCTTCBHHHHHHTT---TTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEEC
T ss_pred EeeCCCCCcHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCccccc
Confidence 99999999999999643 23599999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCc--eeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHh-CCCcCCCCCcccccccHHHHHHHhhhccccc
Q 006907 457 DRRDSH--VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNGQVQKGMILDCVRTLHEERRLD 533 (626)
Q Consensus 457 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~ 533 (626)
...... ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||....... + .......
T Consensus 202 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~----~---~~~~~~~---- 270 (325)
T 3kul_A 202 EDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRD----V---ISSVEEG---- 270 (325)
T ss_dssp C----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH----H---HHHHHTT----
T ss_pred ccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHH----H---HHHHHcC----
Confidence 543322 2223346778999999998999999999999999999999 999997543221 1 1111111
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccc
Q 006907 534 VLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEP 583 (626)
Q Consensus 534 ~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~ 583 (626)
.....+...+..+.+++.+||+.||++|||+.||++.|+.+...
T Consensus 271 ------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~ 314 (325)
T 3kul_A 271 ------YRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRS 314 (325)
T ss_dssp ------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred ------CCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhC
Confidence 11122334557899999999999999999999999999998765
No 30
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.6e-43 Score=365.96 Aligned_cols=250 Identities=22% Similarity=0.324 Sum_probs=199.2
Q ss_pred hCCCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCCcc-cHHHHHHHHHHHHhccCCcccceeeeeecCCceEEEEe
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPNFT-GEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYP 379 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E 379 (626)
.++|.+.+.||+|+||+||+|.. .+++.||||++...... ....+.+|+++++.++||||+++++++.+.+..++|||
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E 88 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLE 88 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEe
Confidence 46788999999999999999985 56889999999765432 33468899999999999999999999999999999999
Q ss_pred ecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccCCC
Q 006907 380 YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRR 459 (626)
Q Consensus 380 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~ 459 (626)
|+++|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||++++++.+||+|||++......
T Consensus 89 ~~~gg~L~~~l~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 161 (347)
T 3zgw_A 89 YCPGGELFDYIISQD----RLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGN 161 (347)
T ss_dssp CCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC----
T ss_pred CCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCcccccCC
Confidence 999999999997643 489999999999999999999999 9999999999999999999999999999866544
Q ss_pred CCceeeeecccCCccCccccccCCC-CccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhcccccccccc
Q 006907 460 DSHVTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDR 538 (626)
Q Consensus 460 ~~~~~~~~~gt~~y~aPE~~~~~~~-t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 538 (626)
.........||+.|+|||++.+..+ +.++|||||||++|||++|+.||...+... ........ .
T Consensus 162 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~-------~~~~i~~~-~------- 226 (347)
T 3zgw_A 162 KDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMA-------LYKKIMRG-K------- 226 (347)
T ss_dssp ----------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHH-------HHHHHHHT-C-------
T ss_pred CCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHH-------HHHHHHcC-C-------
Confidence 3333445569999999999988775 899999999999999999999997543221 11111111 0
Q ss_pred ccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 539 DLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 539 ~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
...+...+..+.+++.+||+.||++|||++|+++.
T Consensus 227 ---~~~p~~~s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 227 ---YDVPKWLSPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp ---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred ---CCCCCCCCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 01222334678899999999999999999999984
No 31
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=6.8e-42 Score=354.06 Aligned_cols=262 Identities=19% Similarity=0.292 Sum_probs=214.5
Q ss_pred cccchHHHHHHhCC----------CCcCceeccCCCceEEEEEeC-CccEEEEEEecCCCcccHHHHHHHHHHHHhccCC
Q 006907 291 KRFSFRELQIATGN----------FSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHR 359 (626)
Q Consensus 291 ~~~~~~~~~~~~~~----------f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 359 (626)
..++++++..+++. |...+.||+|+||.||+|... +|+.||||++..........+.+|+.+++.++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 34667777776654 566779999999999999875 6899999999876666667789999999999999
Q ss_pred cccceeeeeecCCceEEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe
Q 006907 360 NLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILL 439 (626)
Q Consensus 360 nIv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl 439 (626)
||+++++++...+..++||||+++++|.+++.. ..+++..+..++.|++.||.|||+. +|+||||||+||++
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll 174 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ-----VRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILL 174 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEE
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEE
Confidence 999999999999999999999999999999863 2489999999999999999999999 99999999999999
Q ss_pred CCCCcEEEeeccCccccCCCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccH
Q 006907 440 DESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMI 519 (626)
Q Consensus 440 ~~~~~~ki~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i 519 (626)
+.++.+||+|||++........ ......||+.|+|||++.+..++.++||||||+++|||++|+.||.......
T Consensus 175 ~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~----- 248 (321)
T 2c30_A 175 TLDGRVKLSDFGFCAQISKDVP-KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQ----- 248 (321)
T ss_dssp CTTCCEEECCCTTCEECCSSSC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-----
T ss_pred CCCCcEEEeeeeeeeecccCcc-ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-----
Confidence 9999999999999987654322 2234569999999999999999999999999999999999999997543211
Q ss_pred HHHHHHhhhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 520 LDCVRTLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
........... .. ......+..+.+++.+||+.||++|||+.|+++.
T Consensus 249 --~~~~~~~~~~~------~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 249 --AMKRLRDSPPP------KL--KNSHKVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp --HHHHHHHSSCC------CC--TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred --HHHHHhcCCCC------Cc--CccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11111111100 00 0112234678999999999999999999999884
No 32
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=2.2e-43 Score=365.38 Aligned_cols=270 Identities=26% Similarity=0.336 Sum_probs=208.3
Q ss_pred HhCCCCcCceeccCCCceEEEEEeCCccEEEEEEecCCCcccHHHHHHHHHHHHhccCCcccceeeeeecCCc----eEE
Q 006907 301 ATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEE----RLL 376 (626)
Q Consensus 301 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~----~~l 376 (626)
..++|++.++||+|+||+||+|.+. ++.||||+++... .....+..|+.++++++||||+++++++..... .++
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~l 99 (322)
T 3soc_A 22 QSMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWL 99 (322)
T ss_dssp TTEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred chhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEE
Confidence 3457888999999999999999876 6789999996432 223456678889999999999999999987543 699
Q ss_pred EEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhc-------CCCCeEecCCCCCcEEeCCCCcEEEee
Q 006907 377 VYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQ-------CNPKIIHRDVKAANILLDESFEAVVGD 449 (626)
Q Consensus 377 v~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~-------~~~~ivH~Dlkp~NILl~~~~~~ki~D 449 (626)
||||+++|+|.++++.. .+++..+..++.|++.||.|||+. ++++|+||||||+|||++.++.+||+|
T Consensus 100 v~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~D 174 (322)
T 3soc_A 100 ITAFHEKGSLSDFLKAN-----VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIAD 174 (322)
T ss_dssp EEECCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECC
T ss_pred EEecCCCCCHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEcc
Confidence 99999999999999752 389999999999999999999976 244899999999999999999999999
Q ss_pred ccCccccCCCCCc-eeeeecccCCccCccccccC-----CCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccH----
Q 006907 450 FGLAKLLDRRDSH-VTTAVRGTVGHIAPEYLSTG-----QSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMI---- 519 (626)
Q Consensus 450 fG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~-----~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i---- 519 (626)
||++......... ......||+.|+|||++.+. .++.++||||||+++|||++|+.||............
T Consensus 175 Fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 254 (322)
T 3soc_A 175 FGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIG 254 (322)
T ss_dssp CTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHC
T ss_pred CCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhc
Confidence 9999876543322 22334689999999999763 4567899999999999999999999865433221111
Q ss_pred -----HHHHHHhhhccccccccccccCC-CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccc
Q 006907 520 -----LDCVRTLHEERRLDVLIDRDLKG-SFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVE 582 (626)
Q Consensus 520 -----~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~ 582 (626)
........... . .+.+.. ......+..+.+++.+||+.||++|||+.|+++.|+.+..
T Consensus 255 ~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 318 (322)
T 3soc_A 255 QHPSLEDMQEVVVHKK-K----RPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR 318 (322)
T ss_dssp SSCCHHHHHHHHTTSC-C----CCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCCchhhhhhhhhccc-C----CCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 11111111100 0 011110 0123456779999999999999999999999999988653
No 33
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=1.1e-42 Score=360.82 Aligned_cols=248 Identities=22% Similarity=0.313 Sum_probs=206.3
Q ss_pred hCCCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCCc--ccHHHHHHHHHHHHhccCCcccceeeeeecCCceEEEE
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPNF--TGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVY 378 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 378 (626)
.++|.+.+.||+|+||.||+|.. .+++.||||++..... .....+.+|+++++.++||||+++++++.+....++||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 45788999999999999999986 5789999999975432 23446889999999999999999999999999999999
Q ss_pred eecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccCC
Q 006907 379 PYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDR 458 (626)
Q Consensus 379 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~ 458 (626)
||+++|+|.+++.... .+++..+..++.|++.||.|||++ +|+||||||+|||++.++++||+|||++.....
T Consensus 94 e~~~~~~L~~~l~~~~----~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 166 (328)
T 3fe3_A 94 EYASGGEVFDYLVAHG----RMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTV 166 (328)
T ss_dssp CCCTTCBHHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSS
T ss_pred ECCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCC
Confidence 9999999999997642 489999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCceeeeecccCCccCccccccCCCC-ccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccccccccc
Q 006907 459 RDSHVTTAVRGTVGHIAPEYLSTGQSS-EKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLID 537 (626)
Q Consensus 459 ~~~~~~~~~~gt~~y~aPE~~~~~~~t-~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 537 (626)
.. ......||+.|+|||++.+..++ .++|||||||++|||++|+.||...+.... ....... .
T Consensus 167 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-------~~~i~~~-~------ 230 (328)
T 3fe3_A 167 GG--KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKEL-------RERVLRG-K------ 230 (328)
T ss_dssp SC--GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-------HHHHHHC-C------
T ss_pred CC--ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHH-------HHHHHhC-C------
Confidence 32 22345699999999999888765 899999999999999999999976442211 1111111 0
Q ss_pred cccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 538 RDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 538 ~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
...+...+..+.+++.+||+.||++|||++|+++.
T Consensus 231 ----~~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 231 ----YRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp ----CCCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred ----CCCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 01222345678899999999999999999999885
No 34
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1.1e-42 Score=367.54 Aligned_cols=259 Identities=27% Similarity=0.449 Sum_probs=201.2
Q ss_pred hCCCCcCceeccCCCceEEEEEeC----CccEEEEEEecCCCc-ccHHHHHHHHHHHHhccCCcccceeeeeecCCceEE
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCLP----NRMVVAVKRLKDPNF-TGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLL 376 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 376 (626)
.++|.+.+.||+|+||.||+|... ++..||||+++.... .....+.+|+.++++++||||+++++++.+....++
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 457899999999999999999864 567899999976532 234578999999999999999999999999999999
Q ss_pred EEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCcccc
Q 006907 377 VYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL 456 (626)
Q Consensus 377 v~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~ 456 (626)
||||+++|+|.++++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++...
T Consensus 124 v~e~~~~~sL~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 197 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVL 197 (373)
T ss_dssp EEECCTTCBHHHHHHTT---TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC------
T ss_pred EEeCCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCcccccc
Confidence 99999999999999753 34589999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCce--eeeecccCCccCccccccCCCCccchhHHHHHHHHHHHh-CCCcCCCCCcccccccHHHHHHHhhhccccc
Q 006907 457 DRRDSHV--TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNGQVQKGMILDCVRTLHEERRLD 533 (626)
Q Consensus 457 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~ 533 (626)
....... .....+++.|+|||++.+..++.++||||||+++|||++ |+.||....... + .......
T Consensus 198 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~----~---~~~i~~~---- 266 (373)
T 2qol_A 198 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD----V---IKAVDEG---- 266 (373)
T ss_dssp ----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHH----H---HHHHHTT----
T ss_pred ccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH----H---HHHHHcC----
Confidence 5432221 122235778999999999999999999999999999998 999997543211 1 1111111
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccc
Q 006907 534 VLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEP 583 (626)
Q Consensus 534 ~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~ 583 (626)
.....+...+..+.+++.+||+.||++||++.||++.|+.+...
T Consensus 267 ------~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~ 310 (373)
T 2qol_A 267 ------YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310 (373)
T ss_dssp ------EECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ------CCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence 11112234457899999999999999999999999999988654
No 35
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=4.1e-43 Score=368.73 Aligned_cols=272 Identities=25% Similarity=0.378 Sum_probs=218.0
Q ss_pred cchHHHHHHhCCCCcCceeccCCCceEEEEEe------CCccEEEEEEecCCCcc-cHHHHHHHHHHHHhc-cCCcccce
Q 006907 293 FSFRELQIATGNFSPKNILGQGGYGVVYKGCL------PNRMVVAVKRLKDPNFT-GEVQFQTEVEMIGLA-LHRNLLRL 364 (626)
Q Consensus 293 ~~~~~~~~~~~~f~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~nIv~l 364 (626)
+...+++...++|.+.+.||+|+||.||+|.+ .+++.||||+++..... ....+.+|++++.++ +||||+++
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 34556677788999999999999999999973 34678999999865433 345689999999999 79999999
Q ss_pred eeeeecCCc-eEEEEeecCCCChHHHHhhccCC-----------------------------------------------
Q 006907 365 YGFCMTPEE-RLLVYPYMPNGSVADCLRDTRQA----------------------------------------------- 396 (626)
Q Consensus 365 ~~~~~~~~~-~~lv~E~~~~gsL~~~l~~~~~~----------------------------------------------- 396 (626)
++++.+.+. .++||||+++|+|.+++......
T Consensus 92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (359)
T 3vhe_A 92 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK 171 (359)
T ss_dssp EEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------
T ss_pred eeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccc
Confidence 999987654 89999999999999999864321
Q ss_pred ---------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccCCCCC
Q 006907 397 ---------------KPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDS 461 (626)
Q Consensus 397 ---------------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~~ 461 (626)
...+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||++........
T Consensus 172 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 248 (359)
T 3vhe_A 172 SLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 248 (359)
T ss_dssp ------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTT
T ss_pred ccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeeccccc
Confidence 12289999999999999999999999 999999999999999999999999999986644332
Q ss_pred c-eeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHh-CCCcCCCCCcccccccHHHHHHHhhhccccccccccc
Q 006907 462 H-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDRD 539 (626)
Q Consensus 462 ~-~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 539 (626)
. ......||+.|+|||++.+..++.++||||||+++|||++ |+.||........ +..... ...
T Consensus 249 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~---~~~~~~---~~~--------- 313 (359)
T 3vhe_A 249 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---FCRRLK---EGT--------- 313 (359)
T ss_dssp CEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH---HHHHHH---HTC---------
T ss_pred chhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHH---HHHHHH---cCC---------
Confidence 2 2334558899999999999999999999999999999998 9999975442211 111111 111
Q ss_pred cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccc
Q 006907 540 LKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEP 583 (626)
Q Consensus 540 l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~ 583 (626)
....+...+.++.+++.+||+.||++|||+.|+++.|+.++..
T Consensus 314 -~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 356 (359)
T 3vhe_A 314 -RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 356 (359)
T ss_dssp -CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -CCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence 1112223446789999999999999999999999999987653
No 36
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=1.1e-42 Score=353.01 Aligned_cols=258 Identities=23% Similarity=0.398 Sum_probs=210.9
Q ss_pred HhCCCCcCceeccCCCceEEEEEeCCccEEEEEEecCCCcccHHHHHHHHHHHHhccCCcccceeeeeecCCceEEEEee
Q 006907 301 ATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPY 380 (626)
Q Consensus 301 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E~ 380 (626)
..++|.+.+.||+|+||.||+|.+.++..||+|+++.... ...++.+|+++++.++||||+++++++.+....++||||
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 100 (283)
T 3gen_A 22 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEY 100 (283)
T ss_dssp CGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECC
T ss_pred CHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEec
Confidence 4457888899999999999999998888999999986543 356789999999999999999999999999999999999
Q ss_pred cCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccCCCC
Q 006907 381 MPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRD 460 (626)
Q Consensus 381 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~ 460 (626)
+++++|.+++.... ..+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||++.......
T Consensus 101 ~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 174 (283)
T 3gen_A 101 MANGCLLNYLREMR---HRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE 174 (283)
T ss_dssp CTTCBHHHHHHCGG---GCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHH
T ss_pred cCCCcHHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEccccccccccccc
Confidence 99999999997532 3489999999999999999999999 99999999999999999999999999998664332
Q ss_pred CceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHh-CCCcCCCCCcccccccHHHHHHHhhhccccccccccc
Q 006907 461 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDRD 539 (626)
Q Consensus 461 ~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 539 (626)
........+|+.|+|||.+.+..++.++||||||+++|||++ |+.||........ .......
T Consensus 175 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~-------~~~~~~~---------- 237 (283)
T 3gen_A 175 YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSET-------AEHIAQG---------- 237 (283)
T ss_dssp HHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH-------HHHHHTT----------
T ss_pred cccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHH-------HHHHhcc----------
Confidence 222233346788999999999999999999999999999998 9999975442211 1111111
Q ss_pred cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccc
Q 006907 540 LKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVE 582 (626)
Q Consensus 540 l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~ 582 (626)
.....+...+..+.+++.+||+.+|++|||++|+++.|+++.+
T Consensus 238 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~ 280 (283)
T 3gen_A 238 LRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 280 (283)
T ss_dssp CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCCCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhh
Confidence 1111122234678999999999999999999999999998764
No 37
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=2.6e-42 Score=364.65 Aligned_cols=291 Identities=23% Similarity=0.299 Sum_probs=222.8
Q ss_pred CCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCC---cccHHHHHHHHHHHHhccCCcccceeeeeecCCceEEEE
Q 006907 303 GNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPN---FTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVY 378 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 378 (626)
++|.+.+.||+|+||.||++... +++.||+|++.... ......+.+|+++++.++||||+++++++.+.+..++||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 46888999999999999999864 57899999986432 223456889999999999999999999999999999999
Q ss_pred eecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccCC
Q 006907 379 PYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDR 458 (626)
Q Consensus 379 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~ 458 (626)
||+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++.....
T Consensus 95 e~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 167 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQ----NVHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR 167 (384)
T ss_dssp CCCTTEEHHHHHHT----TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred ecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccC
Confidence 99999999999975 23599999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCceeeeecccCCccCcccccc---CCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccccccc
Q 006907 459 RDSHVTTAVRGTVGHIAPEYLST---GQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVL 535 (626)
Q Consensus 459 ~~~~~~~~~~gt~~y~aPE~~~~---~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 535 (626)
.. ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......... .........
T Consensus 168 ~~--~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~----~~~~~~~~~------ 235 (384)
T 4fr4_A 168 ET--QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSK----EIVHTFETT------ 235 (384)
T ss_dssp TC--CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHH----HHHHHHHHC------
T ss_pred CC--ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHH----HHHHHHhhc------
Confidence 32 2344569999999999964 45899999999999999999999999754432211 111111110
Q ss_pred cccccCCCCCHHHHHHHHHHHHHccCCCCCCCCC-HHHHHHHHhhcccc-hhhhhcCCCccccCcccCCCCCCCCCCCCc
Q 006907 536 IDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPK-MSEVLKVLEVLVEP-VTEEMQGGTHFCEARDCSFSGNNSDLQDES 613 (626)
Q Consensus 536 ~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs-~~evl~~L~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 613 (626)
...++...+..+.+++.+||+.||++||+ ++++.+.- +... -|+... ...-..+|.++.....+..
T Consensus 236 -----~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~hp--~f~~~~w~~~~-----~~~~~p~~~p~~~~~~~~~ 303 (384)
T 4fr4_A 236 -----VVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFP--YMNDINWDAVF-----QKRLIPGFIPNKGRLNCDP 303 (384)
T ss_dssp -----CCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTSG--GGTTCCHHHHH-----TTCSCCCCCCSCCSSCCCC
T ss_pred -----ccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHcCh--hhhcCCHHHHH-----hCCCCCCCCCCCCCCCCCC
Confidence 11223344578999999999999999998 66665421 1111 112211 1113355666655666666
Q ss_pred ccchhhhhccC
Q 006907 614 SFIIEAIELSG 624 (626)
Q Consensus 614 ~~~~~~~~~~~ 624 (626)
.|.++++.+++
T Consensus 304 ~~~~~~~~~~~ 314 (384)
T 4fr4_A 304 TFELEEMILES 314 (384)
T ss_dssp CCCSTTSCTTC
T ss_pred ccChhhhhhcc
Confidence 77777776654
No 38
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=3e-43 Score=381.68 Aligned_cols=262 Identities=24% Similarity=0.431 Sum_probs=215.3
Q ss_pred HHHHhCCCCcCceeccCCCceEEEEEeCCccEEEEEEecCCCcccHHHHHHHHHHHHhccCCcccceeeeeecCCceEEE
Q 006907 298 LQIATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLV 377 (626)
Q Consensus 298 ~~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv 377 (626)
+++..++|.+.+.||+|+||.||+|.+.++..||||+++... .....+.+|+++++.++||||+++++++. .+..++|
T Consensus 183 ~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv 260 (454)
T 1qcf_A 183 WEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYII 260 (454)
T ss_dssp SBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred eeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEE
Confidence 344566788899999999999999999888899999998644 34678999999999999999999999986 5678999
Q ss_pred EeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccC
Q 006907 378 YPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLD 457 (626)
Q Consensus 378 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~ 457 (626)
|||+++|+|.++++... ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 261 ~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~ 335 (454)
T 1qcf_A 261 TEFMAKGSLLDFLKSDE--GSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIE 335 (454)
T ss_dssp ECCCTTCBHHHHHHSHH--HHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBC
T ss_pred EeecCCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcC
Confidence 99999999999997532 22478999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHh-CCCcCCCCCcccccccHHHHHHHhhhcccccccc
Q 006907 458 RRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNGQVQKGMILDCVRTLHEERRLDVLI 536 (626)
Q Consensus 458 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 536 (626)
...........+|+.|+|||++....++.++|||||||++|||++ |+.||....... +. ......
T Consensus 336 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~----~~---~~i~~~------- 401 (454)
T 1qcf_A 336 DNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE----VI---RALERG------- 401 (454)
T ss_dssp CHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH----HH---HHHHHT-------
T ss_pred CCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHH----HH---HHHHcC-------
Confidence 322112223346789999999999999999999999999999999 999997543221 11 111111
Q ss_pred ccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccc
Q 006907 537 DRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEP 583 (626)
Q Consensus 537 ~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~ 583 (626)
.....+...+..+.+++.+||+.||++|||+++|++.|+.+...
T Consensus 402 ---~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~ 445 (454)
T 1qcf_A 402 ---YRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTA 445 (454)
T ss_dssp ---CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred ---CCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhc
Confidence 11122334557899999999999999999999999999998764
No 39
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=2.2e-42 Score=356.03 Aligned_cols=267 Identities=22% Similarity=0.273 Sum_probs=205.8
Q ss_pred hCCCCcCceeccCCCceEEEEEeCCccEEEEEEecCCCcc--cHHHHHHHHHHHHhccCCcccceeeeeecCCceEEEEe
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFT--GEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYP 379 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E 379 (626)
.++|++.++||+|+||+||+|...+++.||+|+++..... ....+.+|+++++.++||||+++++++.++...++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 3568889999999999999999888999999999754322 23568899999999999999999999999999999999
Q ss_pred ecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccCCC
Q 006907 380 YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRR 459 (626)
Q Consensus 380 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~ 459 (626)
|+++ +|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++......
T Consensus 100 ~~~~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 172 (311)
T 3niz_A 100 FMEK-DLKKVLDEN---KTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIP 172 (311)
T ss_dssp CCSE-EHHHHHHTC---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTSC
T ss_pred CCCC-CHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCCC
Confidence 9975 888888653 34589999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCceeeeecccCCccCcccccc-CCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccccccc---
Q 006907 460 DSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVL--- 535 (626)
Q Consensus 460 ~~~~~~~~~gt~~y~aPE~~~~-~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--- 535 (626)
... .....||+.|+|||++.+ ..++.++||||||+++|||++|+.||...........+...........+....
T Consensus 173 ~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 251 (311)
T 3niz_A 173 VRS-YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELP 251 (311)
T ss_dssp CC----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSH
T ss_pred ccc-ccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccc
Confidence 222 233458999999999976 568999999999999999999999998655444333333222221111111000
Q ss_pred --ccccc--CCC-----CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 536 --IDRDL--KGS-----FDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 536 --~~~~l--~~~-----~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
..... ... ..+....++.+++.+||+.||++|||++|+++.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 252 LWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp HHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 00000 000 011234678899999999999999999999874
No 40
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=2.2e-42 Score=353.17 Aligned_cols=262 Identities=21% Similarity=0.335 Sum_probs=207.5
Q ss_pred hCCCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCCccc---HHHHHHHHHHHHhccCCcccceeeeeecCCceEEE
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPNFTG---EVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLV 377 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv 377 (626)
.++|.+.+.||+|+||.||+|.. .++..||+|++....... ...+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 35788899999999999999985 458899999986543332 34688999999999999999999999999999999
Q ss_pred EeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccC
Q 006907 378 YPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLD 457 (626)
Q Consensus 378 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~ 457 (626)
|||+++++|.+++.... ++++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||++....
T Consensus 90 ~e~~~g~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 162 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESHG----PLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALS 162 (294)
T ss_dssp EECCCSCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC-
T ss_pred EeCCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCccccc
Confidence 99999999999997642 589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccccccccc
Q 006907 458 RRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLID 537 (626)
Q Consensus 458 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 537 (626)
...........||+.|+|||.+.+..++.++||||||+++|||++|+.||........ ..... .... .. ..
T Consensus 163 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~------~~~~~-~~~~-~~-~~ 233 (294)
T 4eqm_A 163 ETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSI------AIKHI-QDSV-PN-VT 233 (294)
T ss_dssp ------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHH------HHHHH-SSCC-CC-HH
T ss_pred cccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH------HHHHh-hccC-CC-cc
Confidence 5443344455699999999999999999999999999999999999999975432111 01111 1100 00 00
Q ss_pred cccCCCCCHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHHhhcccc
Q 006907 538 RDLKGSFDPTELEKMVQLALQCTQSHPNLRP-KMSEVLKVLEVLVEP 583 (626)
Q Consensus 538 ~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RP-s~~evl~~L~~l~~~ 583 (626)
. ......+..+.+++.+|++.||++|| +++++.+.|+.++..
T Consensus 234 ~----~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~ 276 (294)
T 4eqm_A 234 T----DVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHE 276 (294)
T ss_dssp H----HSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSS
T ss_pred h----hcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhh
Confidence 0 11223357789999999999999999 999999999887654
No 41
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-42 Score=362.29 Aligned_cols=268 Identities=24% Similarity=0.408 Sum_probs=215.5
Q ss_pred HHHHhCCCCcCceeccCCCceEEEEEeC------CccEEEEEEecCCCcc-cHHHHHHHHHHHHhccCCcccceeeeeec
Q 006907 298 LQIATGNFSPKNILGQGGYGVVYKGCLP------NRMVVAVKRLKDPNFT-GEVQFQTEVEMIGLALHRNLLRLYGFCMT 370 (626)
Q Consensus 298 ~~~~~~~f~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~ 370 (626)
+....++|.+.+.||+|+||.||+|... +++.||+|+++..... ....+.+|+++++.++||||+++++++.+
T Consensus 42 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 121 (343)
T 1luf_A 42 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV 121 (343)
T ss_dssp TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred eEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc
Confidence 3445678999999999999999999864 3478999999865432 34568999999999999999999999999
Q ss_pred CCceEEEEeecCCCChHHHHhhccCC--------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEec
Q 006907 371 PEERLLVYPYMPNGSVADCLRDTRQA--------------------KPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHR 430 (626)
Q Consensus 371 ~~~~~lv~E~~~~gsL~~~l~~~~~~--------------------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~ 430 (626)
.+..++||||+++|+|.+++...... ...+++..++.++.|++.||.|||++ +|+||
T Consensus 122 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~ 198 (343)
T 1luf_A 122 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHR 198 (343)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCS
T ss_pred CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecC
Confidence 99999999999999999999864321 25699999999999999999999999 99999
Q ss_pred CCCCCcEEeCCCCcEEEeeccCccccCCCCC-ceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHh-CCCcCC
Q 006907 431 DVKAANILLDESFEAVVGDFGLAKLLDRRDS-HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALD 508 (626)
Q Consensus 431 Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~ellt-g~~p~~ 508 (626)
||||+||+++.++.+||+|||++........ .......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||.
T Consensus 199 Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~ 278 (343)
T 1luf_A 199 DLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYY 278 (343)
T ss_dssp CCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTT
T ss_pred CCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCC
Confidence 9999999999999999999999986543222 12233457899999999999999999999999999999999 999997
Q ss_pred CCCcccccccHHHHHHHhhhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccchh
Q 006907 509 VGNGQVQKGMILDCVRTLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEPVT 585 (626)
Q Consensus 509 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~~~ 585 (626)
...... .......... ...+...+..+.+++.+||+.||++|||+.|+++.|+++...+.
T Consensus 279 ~~~~~~-------~~~~~~~~~~----------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~~ 338 (343)
T 1luf_A 279 GMAHEE-------VIYYVRDGNI----------LACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAE 338 (343)
T ss_dssp TSCHHH-------HHHHHHTTCC----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC---
T ss_pred CCChHH-------HHHHHhCCCc----------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhhh
Confidence 543211 1111111111 11223345789999999999999999999999999999887643
No 42
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=2e-41 Score=350.11 Aligned_cols=273 Identities=17% Similarity=0.240 Sum_probs=216.0
Q ss_pred CCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCCc-ccHHHHHHHHHHHHhccCCcccceeeeeecCC--ceEEEE
Q 006907 303 GNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNF-TGEVQFQTEVEMIGLALHRNLLRLYGFCMTPE--ERLLVY 378 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~--~~~lv~ 378 (626)
++|.+.++||+|+||.||+|... +++.||||+++.... .....+.+|++++++++||||+++++++.... ..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 46888999999999999999865 488999999975432 33456789999999999999999999988765 679999
Q ss_pred eecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe----CCCCcEEEeeccCcc
Q 006907 379 PYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILL----DESFEAVVGDFGLAK 454 (626)
Q Consensus 379 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl----~~~~~~ki~DfG~a~ 454 (626)
||+++++|.+++..... ...+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++.
T Consensus 89 e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~ 164 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSN-AYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (319)
T ss_dssp ECCTTCBHHHHHHSGGG-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTCE
T ss_pred eCCCCCCHHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCce
Confidence 99999999999986432 33489999999999999999999999 99999999999999 888889999999998
Q ss_pred ccCCCCCceeeeecccCCccCccccc--------cCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHh
Q 006907 455 LLDRRDSHVTTAVRGTVGHIAPEYLS--------TGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTL 526 (626)
Q Consensus 455 ~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~ 526 (626)
....... .....||+.|+|||++. +..++.++||||||+++|||++|+.||...........+.......
T Consensus 165 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 242 (319)
T 4euu_A 165 ELEDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG 242 (319)
T ss_dssp ECCTTCC--BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHH
T ss_pred ecCCCCc--eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcC
Confidence 7654332 23345899999999986 5678999999999999999999999997654433333332222221
Q ss_pred hhcccccccc---------cc--ccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcc
Q 006907 527 HEERRLDVLI---------DR--DLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLV 581 (626)
Q Consensus 527 ~~~~~~~~~~---------~~--~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~ 581 (626)
.+........ .. .............+.+++.+||+.||++|||++|+++...+-.
T Consensus 243 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred CCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence 1111111100 00 1122456788899999999999999999999999999877643
No 43
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=2.5e-42 Score=351.58 Aligned_cols=266 Identities=22% Similarity=0.291 Sum_probs=203.4
Q ss_pred CCCCcCceeccCCCceEEEEEeCCccEEEEEEecCCCcc--cHHHHHHHHHHHHhccCCcccceeeeeecCCceEEEEee
Q 006907 303 GNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFT--GEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPY 380 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E~ 380 (626)
++|.+.+.||+|+||.||+|...+++.||+|+++..... ....+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 468889999999999999999877899999999755422 235688999999999999999999999999999999999
Q ss_pred cCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccCCCC
Q 006907 381 MPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRD 460 (626)
Q Consensus 381 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~ 460 (626)
+++ +|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.......
T Consensus 82 ~~~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (288)
T 1ob3_A 82 LDQ-DLKKLLDVC---EGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPV 154 (288)
T ss_dssp CSE-EHHHHHHTS---TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--
T ss_pred cCC-CHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCccc
Confidence 975 999998753 23589999999999999999999999 99999999999999999999999999998764322
Q ss_pred CceeeeecccCCccCccccccC-CCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccccccc----
Q 006907 461 SHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVL---- 535 (626)
Q Consensus 461 ~~~~~~~~gt~~y~aPE~~~~~-~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---- 535 (626)
. ......||+.|+|||++.+. .++.++||||||+++|||++|+.||...........+...........+....
T Consensus 155 ~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
T 1ob3_A 155 R-KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPK 233 (288)
T ss_dssp --------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTT
T ss_pred c-ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccc
Confidence 2 22334589999999999764 58999999999999999999999997654332222222111111111111000
Q ss_pred cccccC-------CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 536 IDRDLK-------GSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 536 ~~~~l~-------~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
.++... ..+....+.++.+++.+||+.||++|||++|+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 234 YDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp CCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 000000 01112345778999999999999999999999874
No 44
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1.8e-42 Score=379.31 Aligned_cols=261 Identities=27% Similarity=0.432 Sum_probs=216.7
Q ss_pred HHhCCCCcCceeccCCCceEEEEEeCC-ccEEEEEEecCCCcccHHHHHHHHHHHHhccCCcccceeeeeecCCceEEEE
Q 006907 300 IATGNFSPKNILGQGGYGVVYKGCLPN-RMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVY 378 (626)
Q Consensus 300 ~~~~~f~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 378 (626)
+...+|.+.+.||+|+||.||+|.+.+ +..||||+++... ....++.+|++++++++||||+++++++.+....++||
T Consensus 217 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 295 (495)
T 1opk_A 217 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 295 (495)
T ss_dssp CCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred cCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEE
Confidence 345568888999999999999999765 7889999997643 34567999999999999999999999999999999999
Q ss_pred eecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccCC
Q 006907 379 PYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDR 458 (626)
Q Consensus 379 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~ 458 (626)
||+++|+|.++++... ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 296 E~~~~g~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 370 (495)
T 1opk_A 296 EFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTG 370 (495)
T ss_dssp ECCTTCBHHHHHHHSC--TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTT
T ss_pred EccCCCCHHHHHHhcC--cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccC
Confidence 9999999999997632 34589999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHh-CCCcCCCCCcccccccHHHHHHHhhhccccccccc
Q 006907 459 RDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNGQVQKGMILDCVRTLHEERRLDVLID 537 (626)
Q Consensus 459 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 537 (626)
..........+++.|+|||++.+..++.++|||||||++|||++ |+.||...+... +.+.+.
T Consensus 371 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~----~~~~~~------------- 433 (495)
T 1opk_A 371 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ----VYELLE------------- 433 (495)
T ss_dssp CCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG----HHHHHH-------------
T ss_pred CceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHH----HHHHHH-------------
Confidence 33222233346789999999999999999999999999999999 999997544221 111111
Q ss_pred cccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccc
Q 006907 538 RDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEP 583 (626)
Q Consensus 538 ~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~ 583 (626)
.......+...+..+.+++.+||+.||++|||+.||++.|+.+...
T Consensus 434 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~ 479 (495)
T 1opk_A 434 KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 479 (495)
T ss_dssp TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSS
T ss_pred cCCCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHhc
Confidence 1112223344567899999999999999999999999999987653
No 45
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=9.7e-43 Score=358.69 Aligned_cols=264 Identities=29% Similarity=0.434 Sum_probs=214.7
Q ss_pred HHhCCCCcCceeccCCCceEEEEEe------CCccEEEEEEecCCCc-ccHHHHHHHHHHHHhccCCcccceeeeeecCC
Q 006907 300 IATGNFSPKNILGQGGYGVVYKGCL------PNRMVVAVKRLKDPNF-TGEVQFQTEVEMIGLALHRNLLRLYGFCMTPE 372 (626)
Q Consensus 300 ~~~~~f~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~ 372 (626)
...++|.+.+.||+|+||.||+|.. .++..||+|+++.... .....+.+|+++++.++||||+++++++.+.+
T Consensus 20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 99 (314)
T 2ivs_A 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDG 99 (314)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred cchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCC
Confidence 3456788899999999999999975 2457899999975432 23456889999999999999999999999999
Q ss_pred ceEEEEeecCCCChHHHHhhccC--------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCC
Q 006907 373 ERLLVYPYMPNGSVADCLRDTRQ--------------------AKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDV 432 (626)
Q Consensus 373 ~~~lv~E~~~~gsL~~~l~~~~~--------------------~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dl 432 (626)
..++||||+++|+|.+++..... ....+++..+..++.|++.||.|||++ +|+||||
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~di 176 (314)
T 2ivs_A 100 PLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDL 176 (314)
T ss_dssp SCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred ceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCccccc
Confidence 99999999999999999986433 123489999999999999999999999 9999999
Q ss_pred CCCcEEeCCCCcEEEeeccCccccCCCCCce-eeeecccCCccCccccccCCCCccchhHHHHHHHHHHHh-CCCcCCCC
Q 006907 433 KAANILLDESFEAVVGDFGLAKLLDRRDSHV-TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVG 510 (626)
Q Consensus 433 kp~NILl~~~~~~ki~DfG~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~ellt-g~~p~~~~ 510 (626)
||+||++++++.+||+|||++.......... .....+|+.|+|||.+.+..++.++||||||+++|||++ |+.||...
T Consensus 177 kp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 256 (314)
T 2ivs_A 177 AARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 256 (314)
T ss_dssp SGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred chheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 9999999999999999999998765433322 223347889999999999889999999999999999999 99999754
Q ss_pred CcccccccHHHHHHHhhhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccc
Q 006907 511 NGQVQKGMILDCVRTLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEP 583 (626)
Q Consensus 511 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~ 583 (626)
.... +...... . .....+...+..+.+++.+||+.||++|||+.|+++.|++++..
T Consensus 257 ~~~~----~~~~~~~---~----------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 257 PPER----LFNLLKT---G----------HRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp CGGG----HHHHHHT---T----------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CHHH----HHHHhhc---C----------CcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 4321 2211111 1 01112233457899999999999999999999999999987653
No 46
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=2.2e-42 Score=371.27 Aligned_cols=264 Identities=19% Similarity=0.240 Sum_probs=214.1
Q ss_pred chHHHHHHhCCCCcCceeccCCCceEEEEEeCC-ccEEEEEEecCCCc---ccHHHHHHHHHHHHhccCCcccceeeeee
Q 006907 294 SFRELQIATGNFSPKNILGQGGYGVVYKGCLPN-RMVVAVKRLKDPNF---TGEVQFQTEVEMIGLALHRNLLRLYGFCM 369 (626)
Q Consensus 294 ~~~~~~~~~~~f~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~ 369 (626)
.+.++....++|++.++||+|+||+||+|...+ ++.||+|+++.... .....+.+|+.++..++||||+++++++.
T Consensus 65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 144 (437)
T 4aw2_A 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ 144 (437)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence 455667778899999999999999999998754 78899999964221 11234889999999999999999999999
Q ss_pred cCCceEEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEee
Q 006907 370 TPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGD 449 (626)
Q Consensus 370 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~D 449 (626)
+.+..++||||+++|+|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|
T Consensus 145 ~~~~~~lV~Ey~~gg~L~~~l~~~---~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~D 218 (437)
T 4aw2_A 145 DDNNLYLVMDYYVGGDLLTLLSKF---EDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLAD 218 (437)
T ss_dssp CSSEEEEEECCCTTCBHHHHHHTT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECC
T ss_pred eCCEEEEEEecCCCCcHHHHHHHc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcc
Confidence 999999999999999999999753 23599999999999999999999999 999999999999999999999999
Q ss_pred ccCccccCCCCCceeeeecccCCccCccccc-----cCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHH
Q 006907 450 FGLAKLLDRRDSHVTTAVRGTVGHIAPEYLS-----TGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVR 524 (626)
Q Consensus 450 fG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~ 524 (626)
||+++..............||+.|+|||++. ...++.++|||||||++|||++|+.||...+.......+..+..
T Consensus 219 FGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~ 298 (437)
T 4aw2_A 219 FGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKE 298 (437)
T ss_dssp CTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHH
T ss_pred hhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccc
Confidence 9999876655444445567999999999997 45689999999999999999999999986543332222221111
Q ss_pred HhhhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 006907 525 TLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNL--RPKMSEVLKV 576 (626)
Q Consensus 525 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~--RPs~~evl~~ 576 (626)
... . +. .....+.++.+|+.+||..+|++ ||+++|+++.
T Consensus 299 ~~~----~-----p~----~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 299 RFQ----F-----PT----QVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp HCC----C-----CS----SCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred ccc----C-----Cc----ccccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 100 0 00 01123467899999999988888 9999999884
No 47
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=4.1e-42 Score=357.56 Aligned_cols=248 Identities=23% Similarity=0.264 Sum_probs=205.6
Q ss_pred CCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCC---cccHHHHHHHHHHHHhccCCcccceeeeeecCCceEEEE
Q 006907 303 GNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPN---FTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVY 378 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 378 (626)
++|++.+.||+|+||.||++... +++.||+|+++... ......+.+|+++++.++||||+++++++.+.+..++||
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 84 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence 56888999999999999999864 58899999997532 223456889999999999999999999999999999999
Q ss_pred eecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccCC
Q 006907 379 PYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDR 458 (626)
Q Consensus 379 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~ 458 (626)
||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 85 E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 157 (337)
T 1o6l_A 85 EYANGGELFFHLSRER----VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS 157 (337)
T ss_dssp ECCTTCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred eCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhccc
Confidence 9999999999997532 489999999999999999999999 999999999999999999999999999986433
Q ss_pred CCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhcccccccccc
Q 006907 459 RDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDR 538 (626)
Q Consensus 459 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 538 (626)
.. .......||+.|+|||++.+..++.++|||||||++|||++|+.||...+... +. ...... .
T Consensus 158 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~----~~---~~i~~~-~------- 221 (337)
T 1o6l_A 158 DG-ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER----LF---ELILME-E------- 221 (337)
T ss_dssp TT-CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH----HH---HHHHHC-C-------
T ss_pred CC-CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHH----HH---HHHHcC-C-------
Confidence 22 22334569999999999999999999999999999999999999997543211 11 111111 0
Q ss_pred ccCCCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 006907 539 DLKGSFDPTELEKMVQLALQCTQSHPNLRP-----KMSEVLKV 576 (626)
Q Consensus 539 ~l~~~~~~~~~~~l~~l~~~cl~~~P~~RP-----s~~evl~~ 576 (626)
..++...+.++.+++.+||+.||++|| +++|+++.
T Consensus 222 ---~~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 222 ---IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp ---CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred ---CCCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 112333457889999999999999999 89999874
No 48
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=7.4e-43 Score=369.51 Aligned_cols=259 Identities=24% Similarity=0.364 Sum_probs=210.3
Q ss_pred HhCCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCCcc-cHHHHHHHHHHHHhccCCcccceeeeeecCCceEEEE
Q 006907 301 ATGNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNFT-GEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVY 378 (626)
Q Consensus 301 ~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 378 (626)
..++|.+.+.||+|+||.||+|.+. +++.||||+++..... ....+.+|+++++.++||||+++++++.+.+..++||
T Consensus 112 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 191 (377)
T 3cbl_A 112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVM 191 (377)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred chHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEE
Confidence 3456788899999999999999975 6889999999754322 2346889999999999999999999999999999999
Q ss_pred eecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccCC
Q 006907 379 PYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDR 458 (626)
Q Consensus 379 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~ 458 (626)
||+++|+|.++++... ..+++..+..++.|++.||+|||++ +|+||||||+|||+++++.+||+|||+++....
T Consensus 192 e~~~~g~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~ 265 (377)
T 3cbl_A 192 ELVQGGDFLTFLRTEG---ARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEAD 265 (377)
T ss_dssp ECCTTCBHHHHHHHHG---GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTT
T ss_pred EcCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCC
Confidence 9999999999997542 2489999999999999999999999 999999999999999999999999999986433
Q ss_pred CCCcee-eeecccCCccCccccccCCCCccchhHHHHHHHHHHHh-CCCcCCCCCcccccccHHHHHHHhhhcccccccc
Q 006907 459 RDSHVT-TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNGQVQKGMILDCVRTLHEERRLDVLI 536 (626)
Q Consensus 459 ~~~~~~-~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 536 (626)
...... ....+++.|+|||.+.+..++.++||||||+++|||++ |+.||....... ....+ ...
T Consensus 266 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~----~~~~~---~~~------- 331 (377)
T 3cbl_A 266 GVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ----TREFV---EKG------- 331 (377)
T ss_dssp SEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHH----HHHHH---HTT-------
T ss_pred CceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH----HHHHH---HcC-------
Confidence 211111 11225778999999998899999999999999999998 999997543211 11111 111
Q ss_pred ccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccc
Q 006907 537 DRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVE 582 (626)
Q Consensus 537 ~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~ 582 (626)
.....+...+..+.+++.+||+.||++|||++++++.|+.+.+
T Consensus 332 ---~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~ 374 (377)
T 3cbl_A 332 ---GRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374 (377)
T ss_dssp ---CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---CCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence 1112233345788999999999999999999999999988654
No 49
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.8e-42 Score=353.77 Aligned_cols=267 Identities=25% Similarity=0.399 Sum_probs=208.6
Q ss_pred hCCCCcCceeccCCCceEEEEEe-----CCccEEEEEEecCCCcccHHHHHHHHHHHHhccCCcccceeeeeecC--Cce
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCL-----PNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTP--EER 374 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~ 374 (626)
.++|++.+.||+|+||.||+|.+ .+++.||||+++.........+.+|++++++++||||+++++++... ...
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 88 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence 45688899999999999999984 35789999999876655556789999999999999999999998653 568
Q ss_pred EEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCcc
Q 006907 375 LLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAK 454 (626)
Q Consensus 375 ~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~ 454 (626)
++||||+++|+|.+++.... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 89 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~ 162 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQKHK---ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTK 162 (295)
T ss_dssp EEEEECCTTCBHHHHHHHCG---GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCSCC
T ss_pred EEEEEeCCCCCHHHHHHhcc---cccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCcccc
Confidence 99999999999999997642 2489999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCc--eeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCccc--------ccccHHHHHH
Q 006907 455 LLDRRDSH--VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQV--------QKGMILDCVR 524 (626)
Q Consensus 455 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~--------~~~~i~~~~~ 524 (626)
........ ......++..|+|||.+.+..++.++||||||+++|||++|..|+....... ..........
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (295)
T 3ugc_A 163 VLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 242 (295)
T ss_dssp -------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHH
T ss_pred cccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHH
Confidence 76543221 1223346778999999999999999999999999999999999986432110 0000000000
Q ss_pred HhhhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccc
Q 006907 525 TLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEP 583 (626)
Q Consensus 525 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~ 583 (626)
. ..........+...+.++.+++.+||+.||++|||+.|+++.|+.+.+.
T Consensus 243 ~---------~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~ 292 (295)
T 3ugc_A 243 E---------LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292 (295)
T ss_dssp H---------HHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred H---------HHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 0 0111112223344567899999999999999999999999999987654
No 50
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=2.4e-42 Score=374.30 Aligned_cols=261 Identities=28% Similarity=0.427 Sum_probs=209.8
Q ss_pred HHhCCCCcCceeccCCCceEEEEEeCCccEEEEEEecCCCcccHHHHHHHHHHHHhccCCcccceeeeeecCCceEEEEe
Q 006907 300 IATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYP 379 (626)
Q Consensus 300 ~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E 379 (626)
+..++|.+.+.||+|+||.||+|.+.++..||||+++... .....+.+|++++++++||||+++++++.+ +..++|||
T Consensus 181 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e 258 (452)
T 1fmk_A 181 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 258 (452)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred cChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEeh
Confidence 3455688889999999999999999888889999998654 345679999999999999999999999876 67899999
Q ss_pred ecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccCCC
Q 006907 380 YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRR 459 (626)
Q Consensus 380 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~ 459 (626)
|+++|+|.+++.... ...+++..+..++.|++.||+|||++ +|+||||||+|||+++++.+||+|||+++.....
T Consensus 259 ~~~~gsL~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 333 (452)
T 1fmk_A 259 YMSKGSLLDFLKGET--GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDN 333 (452)
T ss_dssp CCTTCBHHHHHSHHH--HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC-----
T ss_pred hhcCCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCCC
Confidence 999999999997532 23489999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHh-CCCcCCCCCcccccccHHHHHHHhhhcccccccccc
Q 006907 460 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDR 538 (626)
Q Consensus 460 ~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 538 (626)
.........+++.|+|||.+.+..++.++||||||+++|||++ |+.||....... + .......
T Consensus 334 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~----~---~~~i~~~--------- 397 (452)
T 1fmk_A 334 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE----V---LDQVERG--------- 397 (452)
T ss_dssp ---------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH----H---HHHHHTT---------
T ss_pred ceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHH----H---HHHHHcC---------
Confidence 3333334457889999999999999999999999999999999 999997543211 1 1111111
Q ss_pred ccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccch
Q 006907 539 DLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEPV 584 (626)
Q Consensus 539 ~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~~ 584 (626)
.....+...+..+.+++.+||+.||++|||++++++.|+.+....
T Consensus 398 -~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~ 442 (452)
T 1fmk_A 398 -YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 442 (452)
T ss_dssp -CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred -CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccC
Confidence 111223445678999999999999999999999999999987653
No 51
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=6.5e-42 Score=353.55 Aligned_cols=270 Identities=24% Similarity=0.327 Sum_probs=195.1
Q ss_pred hCCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCCc-ccHHHHHHHHHHHHhccCCcccceeeeeecCCceEEEEe
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNF-TGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYP 379 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E 379 (626)
.++|++.+.||+|+||.||+|... +++.||+|+++.... .....+.+|+++++.++||||+++++++.+++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 457899999999999999999864 588999999975432 234568899999999999999999999999999999999
Q ss_pred ecCCCChHHHHhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccC
Q 006907 380 YMPNGSVADCLRDTRQ--AKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLD 457 (626)
Q Consensus 380 ~~~~gsL~~~l~~~~~--~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~ 457 (626)
|++ |+|.+++..... ....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 998 599999876432 224589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCceeeeecccCCccCccccccC-CCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhcccccccc
Q 006907 458 RRDSHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLI 536 (626)
Q Consensus 458 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 536 (626)
.... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||...........+.+.........+.....
T Consensus 160 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 238 (317)
T 2pmi_A 160 IPVN-TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTK 238 (317)
T ss_dssp SCCC-CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGG
T ss_pred CCcc-cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhh
Confidence 3322 22334589999999999764 689999999999999999999999986554333222222221111111100000
Q ss_pred cccc----------------CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 537 DRDL----------------KGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 537 ~~~l----------------~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
.+.. ........+.++.+++.+||+.||++|||++|+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 239 LPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp CTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 0000 000011234678999999999999999999999874
No 52
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=3.4e-42 Score=349.24 Aligned_cols=259 Identities=21% Similarity=0.347 Sum_probs=199.9
Q ss_pred HhCCCCcCceeccCCCceEEEEEeCC----ccEEEEEEecCCCcc-cHHHHHHHHHHHHhccCCcccceeeeeecCCceE
Q 006907 301 ATGNFSPKNILGQGGYGVVYKGCLPN----RMVVAVKRLKDPNFT-GEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERL 375 (626)
Q Consensus 301 ~~~~f~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 375 (626)
..++|.+.+.||+|+||.||+|.... +..||+|+++..... ....+.+|+.++++++||||+++++++. .+..+
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 91 (281)
T 1mp8_A 13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW 91 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCE
T ss_pred ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccE
Confidence 34578889999999999999998643 457999998764322 3456889999999999999999999984 46789
Q ss_pred EEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccc
Q 006907 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKL 455 (626)
Q Consensus 376 lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~ 455 (626)
+||||+++|+|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 92 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 165 (281)
T 1mp8_A 92 IIMELCTLGELRSFLQVR---KYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRY 165 (281)
T ss_dssp EEEECCTTEEHHHHHHHT---TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC------
T ss_pred EEEecCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECccccccc
Confidence 999999999999999753 23589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHh-CCCcCCCCCcccccccHHHHHHHhhhcccccc
Q 006907 456 LDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNGQVQKGMILDCVRTLHEERRLDV 534 (626)
Q Consensus 456 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 534 (626)
.............+|+.|+|||.+.+..++.++||||||+++|||++ |+.||....... ....+ ....
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~----~~~~i---~~~~---- 234 (281)
T 1mp8_A 166 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND----VIGRI---ENGE---- 234 (281)
T ss_dssp -------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG----HHHHH---HTTC----
T ss_pred cCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH----HHHHH---HcCC----
Confidence 65543333334457889999999999999999999999999999997 999997544322 11111 1111
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccc
Q 006907 535 LIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEP 583 (626)
Q Consensus 535 ~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~ 583 (626)
....+...+..+.+++.+||+.||++|||+.|+++.|+.++..
T Consensus 235 ------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 277 (281)
T 1mp8_A 235 ------RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 277 (281)
T ss_dssp ------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ------CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 1112334457899999999999999999999999999988764
No 53
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.6e-42 Score=352.64 Aligned_cols=262 Identities=27% Similarity=0.431 Sum_probs=218.9
Q ss_pred HHHhCCCCcCceeccCCCceEEEEEeCC-ccEEEEEEecCCCcccHHHHHHHHHHHHhccCCcccceeeeeecCCceEEE
Q 006907 299 QIATGNFSPKNILGQGGYGVVYKGCLPN-RMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLV 377 (626)
Q Consensus 299 ~~~~~~f~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv 377 (626)
+...++|.+.+.||+|+||.||+|...+ +..||+|+++... .....+.+|+++++.++||||+++++++.+....++|
T Consensus 9 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v 87 (288)
T 3kfa_A 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 87 (288)
T ss_dssp BCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEE
T ss_pred cccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEE
Confidence 3456678889999999999999998754 7889999997543 3456789999999999999999999999999999999
Q ss_pred EeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccC
Q 006907 378 YPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLD 457 (626)
Q Consensus 378 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~ 457 (626)
|||+++++|.+++... ....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 88 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~ 162 (288)
T 3kfa_A 88 TEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT 162 (288)
T ss_dssp EECCTTEEHHHHHHHC--CTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSC
T ss_pred EEcCCCCcHHHHHHhc--ccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceecc
Confidence 9999999999999763 234689999999999999999999999 99999999999999999999999999998776
Q ss_pred CCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHh-CCCcCCCCCcccccccHHHHHHHhhhcccccccc
Q 006907 458 RRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNGQVQKGMILDCVRTLHEERRLDVLI 536 (626)
Q Consensus 458 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 536 (626)
...........+|+.|+|||.+.+..++.++||||||+++|+|++ |+.||...+... +......
T Consensus 163 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~----~~~~~~~----------- 227 (288)
T 3kfa_A 163 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ----VYELLEK----------- 227 (288)
T ss_dssp SSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG----HHHHHHT-----------
T ss_pred CCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH----HHHHHhc-----------
Confidence 554444444557889999999999999999999999999999999 999997544221 1111111
Q ss_pred ccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccc
Q 006907 537 DRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEP 583 (626)
Q Consensus 537 ~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~ 583 (626)
......+...+..+.+++.+|++.||++|||+.|+++.|+.+...
T Consensus 228 --~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~ 272 (288)
T 3kfa_A 228 --DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 272 (288)
T ss_dssp --TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --cCCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence 111122334457899999999999999999999999999987764
No 54
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.5e-42 Score=364.17 Aligned_cols=263 Identities=27% Similarity=0.396 Sum_probs=214.4
Q ss_pred HhCCCCcCceeccCCCceEEEEEeC--------CccEEEEEEecCCCcc-cHHHHHHHHHHHHhc-cCCcccceeeeeec
Q 006907 301 ATGNFSPKNILGQGGYGVVYKGCLP--------NRMVVAVKRLKDPNFT-GEVQFQTEVEMIGLA-LHRNLLRLYGFCMT 370 (626)
Q Consensus 301 ~~~~f~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~ 370 (626)
..++|.+.+.||+|+||.||+|... .+..||||+++..... ....+.+|+++++.+ +||||+++++++.+
T Consensus 67 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 146 (382)
T 3tt0_A 67 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 146 (382)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred chhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence 3457888999999999999999752 2467999999765432 335688999999999 89999999999999
Q ss_pred CCceEEEEeecCCCChHHHHhhccC------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEE
Q 006907 371 PEERLLVYPYMPNGSVADCLRDTRQ------------AKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANIL 438 (626)
Q Consensus 371 ~~~~~lv~E~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIL 438 (626)
.+..++||||+++|+|.+++..... ....+++..+..++.|++.||+|||+. +|+||||||+|||
T Consensus 147 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIl 223 (382)
T 3tt0_A 147 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVL 223 (382)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEE
T ss_pred CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEE
Confidence 9999999999999999999986432 124599999999999999999999999 9999999999999
Q ss_pred eCCCCcEEEeeccCccccCCCCC-ceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHh-CCCcCCCCCccccc
Q 006907 439 LDESFEAVVGDFGLAKLLDRRDS-HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNGQVQK 516 (626)
Q Consensus 439 l~~~~~~ki~DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~ 516 (626)
+++++.+||+|||++........ .......+|+.|+|||++.+..++.++||||||+++|||++ |+.||......
T Consensus 224 l~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~--- 300 (382)
T 3tt0_A 224 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE--- 300 (382)
T ss_dssp ECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH---
T ss_pred EcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH---
Confidence 99999999999999987654332 22233447889999999999999999999999999999999 99999754321
Q ss_pred ccHHHHHHHhhhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccc
Q 006907 517 GMILDCVRTLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEP 583 (626)
Q Consensus 517 ~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~ 583 (626)
+......... ....+...+.++.+++.+||+.||++|||++|+++.|+.++..
T Consensus 301 ----~~~~~~~~~~----------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 353 (382)
T 3tt0_A 301 ----ELFKLLKEGH----------RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 353 (382)
T ss_dssp ----HHHHHHHTTC----------CCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHcCC----------CCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 1111111111 1112223457799999999999999999999999999988754
No 55
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=3.4e-42 Score=366.95 Aligned_cols=260 Identities=21% Similarity=0.275 Sum_probs=211.2
Q ss_pred hHHHHHHhCCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCC---cccHHHHHHHHHHHHhccCCcccceeeeeec
Q 006907 295 FRELQIATGNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPN---FTGEVQFQTEVEMIGLALHRNLLRLYGFCMT 370 (626)
Q Consensus 295 ~~~~~~~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~ 370 (626)
+.+++...++|.+.++||+|+||+||+|... +++.||+|+++... ......+.+|+.+++.++||||+++++++.+
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 4456667789999999999999999999865 57899999986422 1123357889999999999999999999999
Q ss_pred CCceEEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeec
Q 006907 371 PEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDF 450 (626)
Q Consensus 371 ~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~Df 450 (626)
+...++||||+++|+|.++++.. .+++..+..++.|++.||.|||++ +|+||||||+|||++.++++||+||
T Consensus 141 ~~~~~lV~E~~~gg~L~~~l~~~-----~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DF 212 (410)
T 3v8s_A 141 DRYLYMVMEYMPGGDLVNLMSNY-----DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADF 212 (410)
T ss_dssp SSEEEEEECCCTTEEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred CCEEEEEEeCCCCCcHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEecc
Confidence 99999999999999999999742 389999999999999999999999 9999999999999999999999999
Q ss_pred cCccccCCCCCceeeeecccCCccCccccccCC----CCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHh
Q 006907 451 GLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQ----SSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTL 526 (626)
Q Consensus 451 G~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~ 526 (626)
|++...............||+.|+|||++.+.. ++.++|||||||++|||++|+.||...+.......+.......
T Consensus 213 G~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~ 292 (410)
T 3v8s_A 213 GTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSL 292 (410)
T ss_dssp TTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHC
T ss_pred ceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccccc
Confidence 999876554433344567999999999997665 7899999999999999999999998654332222221111000
Q ss_pred hhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 006907 527 HEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNL--RPKMSEVLKV 576 (626)
Q Consensus 527 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~--RPs~~evl~~ 576 (626)
........+.++.+|+.+||+.+|++ ||+++||++.
T Consensus 293 --------------~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 293 --------------TFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp --------------CCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred --------------cCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 00001123477899999999999988 9999999984
No 56
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=6.1e-42 Score=350.53 Aligned_cols=261 Identities=25% Similarity=0.367 Sum_probs=202.0
Q ss_pred hCCCCcCceeccCCCceEEEEEeCCccEEEEEEecCCCcccHHHHHHHHHHHHh--ccCCcccceeeeeecC----CceE
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGL--ALHRNLLRLYGFCMTP----EERL 375 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~nIv~l~~~~~~~----~~~~ 375 (626)
.++|.+.+.||+|+||+||+|.. +++.||||++... ....+..|.+++.. ++||||+++++++... ...+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 45788999999999999999987 5788999998642 34456667777666 7899999999986543 4578
Q ss_pred EEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCeEecCCCCCcEEeCCCCcEEE
Q 006907 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLH--------EQCNPKIIHRDVKAANILLDESFEAVV 447 (626)
Q Consensus 376 lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH--------~~~~~~ivH~Dlkp~NILl~~~~~~ki 447 (626)
+||||+++|+|.++++. ..+++..+..++.|++.||+||| +. +|+||||||+|||++.++.+||
T Consensus 83 lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~kl 154 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQL-----TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCCI 154 (301)
T ss_dssp EEECCCTTCBHHHHHTT-----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEEE
T ss_pred EehhhccCCCHHHHHhh-----cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEEE
Confidence 99999999999999953 25899999999999999999999 77 9999999999999999999999
Q ss_pred eeccCccccCCCCCce---eeeecccCCccCccccccC------CCCccchhHHHHHHHHHHHhC----------CCcCC
Q 006907 448 GDFGLAKLLDRRDSHV---TTAVRGTVGHIAPEYLSTG------QSSEKTDVFGFGVLLLELITG----------QKALD 508 (626)
Q Consensus 448 ~DfG~a~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~t~~~DvwSlGvil~elltg----------~~p~~ 508 (626)
+|||++.......... .....||+.|+|||.+.+. .++.++||||||+++|||++| +.||.
T Consensus 155 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~ 234 (301)
T 3q4u_A 155 ADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFY 234 (301)
T ss_dssp CCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTT
T ss_pred eeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccccccc
Confidence 9999998765443332 1233689999999999876 445799999999999999999 77876
Q ss_pred CCCcccccccHHHHHHHhhhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 006907 509 VGNGQVQKGMILDCVRTLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVL 580 (626)
Q Consensus 509 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l 580 (626)
........ ................. ....++...+..+.+++.+||+.||++|||+.||++.|+++
T Consensus 235 ~~~~~~~~--~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 235 DVVPNDPS--FEDMRKVVCVDQQRPNI----PNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp TTSCSSCC--HHHHHHHHTTSCCCCCC----CGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred ccCCCCcc--hhhhhHHHhccCCCCCC----ChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 43322211 11111111111110000 00112345678999999999999999999999999999864
No 57
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=2.1e-42 Score=357.94 Aligned_cols=268 Identities=26% Similarity=0.389 Sum_probs=200.5
Q ss_pred HHHHhCCCCcCceeccCCCceEEEEEeCCc----cEEEEEEecCCC--cccHHHHHHHHHHHHhccCCcccceeeeeecC
Q 006907 298 LQIATGNFSPKNILGQGGYGVVYKGCLPNR----MVVAVKRLKDPN--FTGEVQFQTEVEMIGLALHRNLLRLYGFCMTP 371 (626)
Q Consensus 298 ~~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~----~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~ 371 (626)
..+..++|.+.+.||+|+||.||+|..... ..||||+++... ......+.+|+++++.++||||+++++++...
T Consensus 18 ~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 97 (323)
T 3qup_A 18 VLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRS 97 (323)
T ss_dssp TBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC
T ss_pred cccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecc
Confidence 344567899999999999999999986543 279999997653 23345789999999999999999999999877
Q ss_pred Cce------EEEEeecCCCChHHHHhhccC--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCC
Q 006907 372 EER------LLVYPYMPNGSVADCLRDTRQ--AKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESF 443 (626)
Q Consensus 372 ~~~------~lv~E~~~~gsL~~~l~~~~~--~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~ 443 (626)
... ++||||+++|+|.+++..... ....+++..+..++.|++.||.|||++ +|+||||||+||++++++
T Consensus 98 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~ 174 (323)
T 3qup_A 98 RAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDM 174 (323)
T ss_dssp -------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTS
T ss_pred ccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCC
Confidence 655 999999999999999975432 223589999999999999999999999 999999999999999999
Q ss_pred cEEEeeccCccccCCCCCc-eeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHh-CCCcCCCCCcccccccHHH
Q 006907 444 EAVVGDFGLAKLLDRRDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNGQVQKGMILD 521 (626)
Q Consensus 444 ~~ki~DfG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~i~~ 521 (626)
.+||+|||++......... ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||....... +..
T Consensus 175 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~----~~~ 250 (323)
T 3qup_A 175 TVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE----IYN 250 (323)
T ss_dssp CEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG----HHH
T ss_pred CEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH----HHH
Confidence 9999999999876443322 2223446789999999999999999999999999999999 899997544322 111
Q ss_pred HHHHhhhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccchh
Q 006907 522 CVRTLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEPVT 585 (626)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~~~ 585 (626)
. ..... ....+...+..+.+++.+||+.||++|||+.|+++.|++++...+
T Consensus 251 ~---~~~~~----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~ 301 (323)
T 3qup_A 251 Y---LIGGN----------RLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLS 301 (323)
T ss_dssp H---HHTTC----------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC--
T ss_pred H---HhcCC----------CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhh
Confidence 1 11111 111223445789999999999999999999999999999877544
No 58
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.3e-42 Score=358.18 Aligned_cols=271 Identities=24% Similarity=0.370 Sum_probs=212.8
Q ss_pred HHHhCCCCcCceeccCCCceEEEEEe------CCccEEEEEEecCCC-cccHHHHHHHHHHHHhc-cCCcccceeeeeec
Q 006907 299 QIATGNFSPKNILGQGGYGVVYKGCL------PNRMVVAVKRLKDPN-FTGEVQFQTEVEMIGLA-LHRNLLRLYGFCMT 370 (626)
Q Consensus 299 ~~~~~~f~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~ 370 (626)
+...++|.+.+.||+|+||.||+|.. .++..||+|+++... ......+.+|+.+++++ +||||+++++++..
T Consensus 41 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 120 (344)
T 1rjb_A 41 EFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTL 120 (344)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred ccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEee
Confidence 34567889999999999999999985 245689999997543 22345789999999999 89999999999999
Q ss_pred CCceEEEEeecCCCChHHHHhhccCC-------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecC
Q 006907 371 PEERLLVYPYMPNGSVADCLRDTRQA-------------------KPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRD 431 (626)
Q Consensus 371 ~~~~~lv~E~~~~gsL~~~l~~~~~~-------------------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~D 431 (626)
.+..++||||+++|+|.+++...... ...+++..+..++.|++.||.|||++ +|+|||
T Consensus 121 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~D 197 (344)
T 1rjb_A 121 SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRD 197 (344)
T ss_dssp SSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETT
T ss_pred CCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCC
Confidence 99999999999999999999764321 13489999999999999999999999 999999
Q ss_pred CCCCcEEeCCCCcEEEeeccCccccCCCCCc-eeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHh-CCCcCCC
Q 006907 432 VKAANILLDESFEAVVGDFGLAKLLDRRDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDV 509 (626)
Q Consensus 432 lkp~NILl~~~~~~ki~DfG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~ellt-g~~p~~~ 509 (626)
|||+||+++.++.+||+|||++......... ......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||..
T Consensus 198 ikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~ 277 (344)
T 1rjb_A 198 LAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPG 277 (344)
T ss_dssp CSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred CChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCccc
Confidence 9999999999999999999999876544332 2233457889999999999999999999999999999998 9999975
Q ss_pred CCcccccccHHHHHHHhhhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccchhhhh
Q 006907 510 GNGQVQKGMILDCVRTLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEPVTEEM 588 (626)
Q Consensus 510 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~~~~~~ 588 (626)
...... ...... . ......+...+..+.+++.+||+.||++|||+.|+++.|+.++....++.
T Consensus 278 ~~~~~~---~~~~~~---~----------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~~ 340 (344)
T 1rjb_A 278 IPVDAN---FYKLIQ---N----------GFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAEEAM 340 (344)
T ss_dssp CCCSHH---HHHHHH---T----------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-------
T ss_pred CCcHHH---HHHHHh---c----------CCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHHHHH
Confidence 442211 111111 1 11111223345789999999999999999999999999999888765553
No 59
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.4e-42 Score=364.12 Aligned_cols=262 Identities=29% Similarity=0.414 Sum_probs=210.9
Q ss_pred hCCCCcCceeccCCCceEEEEEeC------CccEEEEEEecCCC-cccHHHHHHHHHHHHhccCCcccceeeeeecCCce
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCLP------NRMVVAVKRLKDPN-FTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEER 374 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 374 (626)
.++|.+.+.||+|+||.||+|.+. ++..||||+++... ......+.+|+.++++++||||+++++++.+....
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 149 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 149 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 346788999999999999999853 35689999997543 33345688999999999999999999999999999
Q ss_pred EEEEeecCCCChHHHHhhccC---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCC---cEEEe
Q 006907 375 LLVYPYMPNGSVADCLRDTRQ---AKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESF---EAVVG 448 (626)
Q Consensus 375 ~lv~E~~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~---~~ki~ 448 (626)
++||||+++|+|.+++..... ....+++..+..++.|++.||+|||++ +|+||||||+|||++.++ .+||+
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL~ 226 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 226 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEEC
Confidence 999999999999999987542 234589999999999999999999999 999999999999999554 59999
Q ss_pred eccCccccCCCC-CceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHh-CCCcCCCCCcccccccHHHHHHHh
Q 006907 449 DFGLAKLLDRRD-SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNGQVQKGMILDCVRTL 526 (626)
Q Consensus 449 DfG~a~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~i~~~~~~~ 526 (626)
|||+++...... ........||+.|+|||++.+..++.++|||||||++|||++ |+.||....... +. ...
T Consensus 227 DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~----~~---~~i 299 (367)
T 3l9p_A 227 DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE----VL---EFV 299 (367)
T ss_dssp CCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH----HH---HHH
T ss_pred CCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH----HH---HHH
Confidence 999997543221 122233457899999999999999999999999999999998 999997543221 11 111
Q ss_pred hhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccc
Q 006907 527 HEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEP 583 (626)
Q Consensus 527 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~ 583 (626)
.... ....+...+..+.+++.+||+.||++|||+.||++.|+.+...
T Consensus 300 ~~~~----------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~ 346 (367)
T 3l9p_A 300 TSGG----------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 346 (367)
T ss_dssp HTTC----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HcCC----------CCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhC
Confidence 1111 1112233456789999999999999999999999999887554
No 60
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=3e-42 Score=360.94 Aligned_cols=250 Identities=25% Similarity=0.341 Sum_probs=200.6
Q ss_pred HHhCCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCC---cccHHHHHHHHHHHHhc-cCCcccceeeeeecCCce
Q 006907 300 IATGNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPN---FTGEVQFQTEVEMIGLA-LHRNLLRLYGFCMTPEER 374 (626)
Q Consensus 300 ~~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~ 374 (626)
...++|++.++||+|+||.||+|... +++.||+|+++... ......+..|.+++..+ +||||+++++++.+.+..
T Consensus 20 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~ 99 (353)
T 3txo_A 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRL 99 (353)
T ss_dssp ---CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred CchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEE
Confidence 34568999999999999999999864 58899999997532 12334578899999987 699999999999999999
Q ss_pred EEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCcc
Q 006907 375 LLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAK 454 (626)
Q Consensus 375 ~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~ 454 (626)
++||||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++++||+|||+++
T Consensus 100 ~lv~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~ 172 (353)
T 3txo_A 100 FFVMEFVNGGDLMFHIQKSR----RFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCK 172 (353)
T ss_dssp EEEEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred EEEEeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEcccccee
Confidence 99999999999999997642 489999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhcccccc
Q 006907 455 LLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDV 534 (626)
Q Consensus 455 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 534 (626)
..... ........||+.|+|||++.+..++.++|||||||++|||++|+.||...+..... ......
T Consensus 173 ~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~-------~~i~~~----- 239 (353)
T 3txo_A 173 EGICN-GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLF-------EAILND----- 239 (353)
T ss_dssp CSCC----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-------HHHHHC-----
T ss_pred ecccC-CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHH-------HHHHcC-----
Confidence 54322 22334456999999999999888999999999999999999999999765432211 111111
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCH------HHHHH
Q 006907 535 LIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKM------SEVLK 575 (626)
Q Consensus 535 ~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~------~evl~ 575 (626)
...++...+..+.+++.+||+.||++||++ .|+++
T Consensus 240 ------~~~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 240 ------EVVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp ------CCCCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred ------CCCCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 011223345778999999999999999998 67766
No 61
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=3.8e-41 Score=346.20 Aligned_cols=264 Identities=30% Similarity=0.439 Sum_probs=205.5
Q ss_pred HHhCCCCcCceeccCCCceEEEEEeCCccEEEEEEecCCCcc--cHHHHHHHHHHHHhccCCcccceeeeeecCCceEEE
Q 006907 300 IATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFT--GEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLV 377 (626)
Q Consensus 300 ~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv 377 (626)
+..++|.+.+.||+|+||.||+|...+ .+|+|+++..... ....+.+|++++++++||||+++++++. .+..++|
T Consensus 33 i~~~~~~~~~~lG~G~~g~Vy~~~~~~--~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv 109 (307)
T 3lb7_A 33 IEASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIV 109 (307)
T ss_dssp CCTTSCCEEEEEEECSSCEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred ecccceEEEeEecCCCCeEEEEEEECC--EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEE
Confidence 345678999999999999999998654 4889988754332 3356899999999999999999999875 4668999
Q ss_pred EeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccC
Q 006907 378 YPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLD 457 (626)
Q Consensus 378 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~ 457 (626)
|||+++++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||++....
T Consensus 110 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~ 183 (307)
T 3lb7_A 110 TQWCEGSSLYKHLHVQ---ETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKS 183 (307)
T ss_dssp EECCSSCBHHHHHHTS---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC--
T ss_pred EecCCCCcHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceecc
Confidence 9999999999999743 34599999999999999999999999 99999999999999999999999999998654
Q ss_pred CC-CCceeeeecccCCccCccccc---cCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccccc
Q 006907 458 RR-DSHVTTAVRGTVGHIAPEYLS---TGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLD 533 (626)
Q Consensus 458 ~~-~~~~~~~~~gt~~y~aPE~~~---~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~ 533 (626)
.. .........||+.|+|||++. +..++.++||||||+++|||++|+.||........ +..........
T Consensus 184 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~---~~~~~~~~~~~---- 256 (307)
T 3lb7_A 184 RWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ---IIFMVGRGYAS---- 256 (307)
T ss_dssp ----------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH---HHHHHHHTCCC----
T ss_pred cccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHH---HHHHHhcCCCC----
Confidence 32 122233446999999999996 56789999999999999999999999975443221 11111111000
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccch
Q 006907 534 VLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEPV 584 (626)
Q Consensus 534 ~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~~ 584 (626)
+.+ .......++.+.+++.+||+.+|++|||+.|+++.|+.+...+
T Consensus 257 ----~~~-~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~ 302 (307)
T 3lb7_A 257 ----PDL-SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp ----CCS-TTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred ----cch-hhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhc
Confidence 000 1112234578999999999999999999999999999876654
No 62
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3.8e-42 Score=345.76 Aligned_cols=257 Identities=26% Similarity=0.435 Sum_probs=212.5
Q ss_pred hCCCCcCceeccCCCceEEEEEeCCccEEEEEEecCCCcccHHHHHHHHHHHHhccCCcccceeeeeecCCceEEEEeec
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPYM 381 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E~~ 381 (626)
.++|.+.+.||+|+||.||+|...++..||+|+++.... ....+.+|+++++.++||||+++++++.+.+..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM 85 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence 356788899999999999999988888999999986543 3567899999999999999999999999999999999999
Q ss_pred CCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccCCCCC
Q 006907 382 PNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDS 461 (626)
Q Consensus 382 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~~ 461 (626)
++++|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 86 ~~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 159 (267)
T 3t9t_A 86 EHGCLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 159 (267)
T ss_dssp TTCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHH
T ss_pred CCCcHHHHHhhC---cccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEcccccccccccccc
Confidence 999999999753 23589999999999999999999999 999999999999999999999999999986543221
Q ss_pred ceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHh-CCCcCCCCCcccccccHHHHHHHhhhcccccccccccc
Q 006907 462 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDRDL 540 (626)
Q Consensus 462 ~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l 540 (626)
.......+++.|+|||.+.+..++.++||||||+++|||++ |+.||....... .........
T Consensus 160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-------~~~~i~~~~---------- 222 (267)
T 3t9t_A 160 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE-------VVEDISTGF---------- 222 (267)
T ss_dssp HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-------HHHHHHTTC----------
T ss_pred cccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHH-------HHHHHhcCC----------
Confidence 22223346788999999998999999999999999999999 899997543211 111111110
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccc
Q 006907 541 KGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVE 582 (626)
Q Consensus 541 ~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~ 582 (626)
....+...+..+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 223 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 223 RLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCCCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 011122235678999999999999999999999999998764
No 63
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=7.1e-42 Score=352.05 Aligned_cols=265 Identities=24% Similarity=0.393 Sum_probs=215.5
Q ss_pred HHhCCCCcCceeccCCCceEEEEEe------CCccEEEEEEecCCCc-ccHHHHHHHHHHHHhc-cCCcccceeeeeecC
Q 006907 300 IATGNFSPKNILGQGGYGVVYKGCL------PNRMVVAVKRLKDPNF-TGEVQFQTEVEMIGLA-LHRNLLRLYGFCMTP 371 (626)
Q Consensus 300 ~~~~~f~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~ 371 (626)
...++|.+.+.||+|+||.||+|.. .+++.||+|+++.... .....+.+|+++++++ +||||+++++++.++
T Consensus 20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 99 (313)
T 1t46_A 20 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIG 99 (313)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred cChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecC
Confidence 3446788899999999999999974 3468899999986543 3345789999999999 899999999999999
Q ss_pred CceEEEEeecCCCChHHHHhhccC--------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcE
Q 006907 372 EERLLVYPYMPNGSVADCLRDTRQ--------------AKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANI 437 (626)
Q Consensus 372 ~~~~lv~E~~~~gsL~~~l~~~~~--------------~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NI 437 (626)
+..++||||+++|+|.+++..... ....+++..+..++.|++.||.|||++ +|+||||||+||
T Consensus 100 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Ni 176 (313)
T 1t46_A 100 GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNI 176 (313)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGE
T ss_pred CCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceE
Confidence 999999999999999999986432 123589999999999999999999999 999999999999
Q ss_pred EeCCCCcEEEeeccCccccCCCCCce-eeeecccCCccCccccccCCCCccchhHHHHHHHHHHHh-CCCcCCCCCcccc
Q 006907 438 LLDESFEAVVGDFGLAKLLDRRDSHV-TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNGQVQ 515 (626)
Q Consensus 438 Ll~~~~~~ki~DfG~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~ellt-g~~p~~~~~~~~~ 515 (626)
+++.++.+||+|||++.......... .....+|+.|+|||.+.+..++.++||||||+++|||++ |+.||........
T Consensus 177 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~ 256 (313)
T 1t46_A 177 LLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK 256 (313)
T ss_dssp EEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH
T ss_pred EEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhH
Confidence 99999999999999998765543322 223447889999999999999999999999999999999 9999975442211
Q ss_pred cccHHHHHHHhhhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccc
Q 006907 516 KGMILDCVRTLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEP 583 (626)
Q Consensus 516 ~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~ 583 (626)
....... . .....+...+..+.+++.+||+.||++|||+.|+++.|++++..
T Consensus 257 ---~~~~~~~---~----------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 308 (313)
T 1t46_A 257 ---FYKMIKE---G----------FRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 308 (313)
T ss_dssp ---HHHHHHH---T----------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---HHHHhcc---C----------CCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 1111111 0 11111223457789999999999999999999999999987764
No 64
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=2.9e-41 Score=350.69 Aligned_cols=262 Identities=17% Similarity=0.170 Sum_probs=210.3
Q ss_pred hCCCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCCcccHHHHHHHHHHHHhc-cCCcccceeeeeecCCceEEEEe
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLA-LHRNLLRLYGFCMTPEERLLVYP 379 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv~E 379 (626)
.++|.+.+.||+|+||.||+|.. .+++.||||++..... ...+..|+++++.+ +||||+++++++......++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 85 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE 85 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence 35788999999999999999985 5688999999875432 33688999999999 89999999999999999999999
Q ss_pred ecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCc-----EEEeeccCcc
Q 006907 380 YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFE-----AVVGDFGLAK 454 (626)
Q Consensus 380 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~-----~ki~DfG~a~ 454 (626)
|+ +++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+|||++.
T Consensus 86 ~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~ 158 (330)
T 2izr_A 86 LL-GPSLEDLFDLC---DRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAK 158 (330)
T ss_dssp CC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCE
T ss_pred eC-CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcccce
Confidence 99 99999999764 23699999999999999999999999 9999999999999998887 9999999998
Q ss_pred ccCCCCCce------eeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhh
Q 006907 455 LLDRRDSHV------TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHE 528 (626)
Q Consensus 455 ~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~ 528 (626)
.+....... .....||+.|+|||++.+..++.++||||||+++|||++|+.||.................. ..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~-~~ 237 (330)
T 2izr_A 159 EYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDT-KR 237 (330)
T ss_dssp ESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHH-HH
T ss_pred eeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhh-hc
Confidence 765433221 23456999999999999999999999999999999999999999865433221111111111 00
Q ss_pred ccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccc
Q 006907 529 ERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEP 583 (626)
Q Consensus 529 ~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~ 583 (626)
.... ..+. ...+ ++.+++.+|++.||.+||++++|++.|+++...
T Consensus 238 ~~~~-----~~~~----~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~ 282 (330)
T 2izr_A 238 ATPI-----EVLC----ENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDR 282 (330)
T ss_dssp HSCH-----HHHT----TTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred cCCH-----HHHh----ccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHH
Confidence 0000 0000 0122 799999999999999999999999999876553
No 65
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=5.9e-42 Score=355.49 Aligned_cols=257 Identities=24% Similarity=0.415 Sum_probs=203.8
Q ss_pred CCCCcCceeccCCCceEEEEEeC-Ccc----EEEEEEecCCC-cccHHHHHHHHHHHHhccCCcccceeeeeecCCceEE
Q 006907 303 GNFSPKNILGQGGYGVVYKGCLP-NRM----VVAVKRLKDPN-FTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLL 376 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 376 (626)
++|++.++||+|+||+||+|.+. +++ .||+|.++... ......+.+|+.++++++||||+++++++.++ ..++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~ 93 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 93 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS-SEEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-CeEE
Confidence 45788899999999999999853 333 46888886433 33456799999999999999999999999875 4789
Q ss_pred EEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCcccc
Q 006907 377 VYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL 456 (626)
Q Consensus 377 v~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~ 456 (626)
|+||+++|+|.+++.... ..+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 94 v~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 167 (327)
T 3poz_A 94 ITQLMPFGCLLDYVREHK---DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167 (327)
T ss_dssp EEECCTTCBHHHHHHHST---TSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHHH
T ss_pred EEEecCCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeEc
Confidence 999999999999997642 3589999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCc-eeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHh-CCCcCCCCCcccccccHHHHHHHhhhcccccc
Q 006907 457 DRRDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNGQVQKGMILDCVRTLHEERRLDV 534 (626)
Q Consensus 457 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 534 (626)
...... ......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||....... +...+..
T Consensus 168 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~----~~~~~~~--------- 234 (327)
T 3poz_A 168 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE----ISSILEK--------- 234 (327)
T ss_dssp TTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG----HHHHHHT---------
T ss_pred cCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH----HHHHHHc---------
Confidence 544332 2233446889999999999999999999999999999999 999997544322 1111111
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccc
Q 006907 535 LIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEP 583 (626)
Q Consensus 535 ~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~ 583 (626)
......+...+..+.+++.+||+.||++|||+.|+++.|+.+...
T Consensus 235 ----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 235 ----GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp ----TCCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred ----CCCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 111122334457799999999999999999999999999987664
No 66
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=1.8e-41 Score=367.20 Aligned_cols=254 Identities=26% Similarity=0.359 Sum_probs=209.4
Q ss_pred HHhCCCCcCceeccCCCceEEEEEeCCccEEEEEEecCCCcccHHHHHHHHHHHHhccCCcccceeeeeecCC-ceEEEE
Q 006907 300 IATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPE-ERLLVY 378 (626)
Q Consensus 300 ~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~-~~~lv~ 378 (626)
+..++|.+.+.||+|+||.||+|.+. ++.||||+++... ....+.+|++++++++||||+++++++.+.. ..++||
T Consensus 190 i~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~ 266 (450)
T 1k9a_A 190 LNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 266 (450)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEE
T ss_pred cChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEE
Confidence 34567888999999999999999875 6689999998654 3467899999999999999999999987665 789999
Q ss_pred eecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccCC
Q 006907 379 PYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDR 458 (626)
Q Consensus 379 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~ 458 (626)
||+++|+|.+++.... ...+++..+..++.|++.||+|||++ +|+||||||+|||+++++.+||+|||+++....
T Consensus 267 e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 341 (450)
T 1k9a_A 267 EYMAKGSLVDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 341 (450)
T ss_dssp ECCTTCBHHHHHHHHC--TTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC-
T ss_pred EecCCCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCcccccc
Confidence 9999999999998642 23479999999999999999999999 999999999999999999999999999985432
Q ss_pred CCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHh-CCCcCCCCCcccccccHHHHHHHhhhccccccccc
Q 006907 459 RDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNGQVQKGMILDCVRTLHEERRLDVLID 537 (626)
Q Consensus 459 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 537 (626)
.. ....+++.|+|||.+.+..++.++||||||+++|||++ |+.||....... +...+ ..
T Consensus 342 ~~----~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~----~~~~i---~~--------- 401 (450)
T 1k9a_A 342 TQ----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD----VVPRV---EK--------- 401 (450)
T ss_dssp ---------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT----HHHHH---HT---------
T ss_pred cc----cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH----HHHHH---Hc---------
Confidence 21 12247889999999999999999999999999999998 999997544321 11111 11
Q ss_pred cccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccc
Q 006907 538 RDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVE 582 (626)
Q Consensus 538 ~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~ 582 (626)
......+..++..+.+++.+||+.||++|||+.++++.|+.+..
T Consensus 402 -~~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~ 445 (450)
T 1k9a_A 402 -GYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRT 445 (450)
T ss_dssp -TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -CCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 11122334456789999999999999999999999999988654
No 67
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=3.5e-42 Score=348.57 Aligned_cols=260 Identities=28% Similarity=0.468 Sum_probs=213.1
Q ss_pred HHhCCCCcCceeccCCCceEEEEEeCCccEEEEEEecCCCcccHHHHHHHHHHHHhccCCcccceeeeeecCCceEEEEe
Q 006907 300 IATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYP 379 (626)
Q Consensus 300 ~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E 379 (626)
+..++|.+.+.||+|+||.||+|...++..||+|+++... .....+.+|+++++.++||||+++++++.+ +..++|||
T Consensus 10 v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e 87 (279)
T 1qpc_A 10 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITE 87 (279)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred cCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEe
Confidence 3446788899999999999999998888889999997644 345678999999999999999999999864 56899999
Q ss_pred ecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccCCC
Q 006907 380 YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRR 459 (626)
Q Consensus 380 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~ 459 (626)
|+++++|.+++.... ...+++..+..++.|++.||.|||++ +|+||||||+||++++++.+||+|||++......
T Consensus 88 ~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 162 (279)
T 1qpc_A 88 YMENGSLVDFLKTPS--GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDN 162 (279)
T ss_dssp CCTTCBHHHHTTSHH--HHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSS
T ss_pred cCCCCCHHHHHhcCC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCc
Confidence 999999999997532 12489999999999999999999999 9999999999999999999999999999876544
Q ss_pred CCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHh-CCCcCCCCCcccccccHHHHHHHhhhcccccccccc
Q 006907 460 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDR 538 (626)
Q Consensus 460 ~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 538 (626)
.........+++.|+|||.+.+..++.++||||||+++|||++ |+.||....... + .......
T Consensus 163 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~----~---~~~~~~~--------- 226 (279)
T 1qpc_A 163 EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE----V---IQNLERG--------- 226 (279)
T ss_dssp CEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH----H---HHHHHTT---------
T ss_pred ccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHH----H---HHHHhcc---------
Confidence 3333333446789999999998889999999999999999999 899997543211 1 1111111
Q ss_pred ccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccc
Q 006907 539 DLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEP 583 (626)
Q Consensus 539 ~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~ 583 (626)
.....+...+..+.+++.+|++.||++|||+.++++.|+.+...
T Consensus 227 -~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 270 (279)
T 1qpc_A 227 -YRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270 (279)
T ss_dssp -CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -cCCCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHh
Confidence 01112223457899999999999999999999999999988665
No 68
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=3.6e-41 Score=353.73 Aligned_cols=248 Identities=22% Similarity=0.285 Sum_probs=205.7
Q ss_pred hCCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCCcc------cHHHHHHHHHHHHhccCCcccceeeeeecCCce
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNFT------GEVQFQTEVEMIGLALHRNLLRLYGFCMTPEER 374 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 374 (626)
.+.|.+.+.||+|+||.||++... +++.||+|+++..... ....+.+|+.+++.++||||+++++++.+....
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 456888999999999999999864 5889999999754322 245789999999999999999999999999999
Q ss_pred EEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCC----cEEEeec
Q 006907 375 LLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESF----EAVVGDF 450 (626)
Q Consensus 375 ~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~----~~ki~Df 450 (626)
++||||+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||++++++ .+||+||
T Consensus 91 ~lv~e~~~gg~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DF 163 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQ----KESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (361)
T ss_dssp EEEEECCCSCBHHHHHTT----CSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred EEEEEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEec
Confidence 999999999999999964 23599999999999999999999999 999999999999998776 7999999
Q ss_pred cCccccCCCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhcc
Q 006907 451 GLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEER 530 (626)
Q Consensus 451 G~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~ 530 (626)
|++....... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||........ .......
T Consensus 164 G~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~-------~~~i~~~- 233 (361)
T 2yab_A 164 GLAHEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET-------LANITAV- 233 (361)
T ss_dssp SSCEECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHH-------HHHHHTT-
T ss_pred CCceEcCCCC--ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHH-------HHHHHhc-
Confidence 9998765432 22345699999999999998999999999999999999999999975442211 1111110
Q ss_pred ccccccccccCCCCCH----HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 531 RLDVLIDRDLKGSFDP----TELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 531 ~~~~~~~~~l~~~~~~----~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
...++. ..+..+.+++.+||..||++|||+.|+++.
T Consensus 234 ----------~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 273 (361)
T 2yab_A 234 ----------SYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (361)
T ss_dssp ----------CCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ----------CCCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 001111 224678999999999999999999999873
No 69
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=9e-42 Score=343.92 Aligned_cols=254 Identities=27% Similarity=0.434 Sum_probs=196.1
Q ss_pred hCCCCcCceeccCCCceEEEEEeCCccEEEEEEecCCCcc----cHHHHHHHHHHHHhccCCcccceeeeeecCCceEEE
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFT----GEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLV 377 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv 377 (626)
.++|++.+.||+|+||.||+|.+. ++.||||+++..... ....+.+|+++++.++||||+++++++.+++..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 357888999999999999999875 778999998754322 235688999999999999999999999999999999
Q ss_pred EeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC--------CCcEEEee
Q 006907 378 YPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDE--------SFEAVVGD 449 (626)
Q Consensus 378 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~--------~~~~ki~D 449 (626)
|||+++++|.+++.. ..+++..+..++.|++.||.|||++...+|+||||||+||+++. ++.+||+|
T Consensus 85 ~e~~~~~~L~~~~~~-----~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~D 159 (271)
T 3dtc_A 85 MEFARGGPLNRVLSG-----KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITD 159 (271)
T ss_dssp EECCTTEEHHHHHTS-----SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECC
T ss_pred EEcCCCCCHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEcc
Confidence 999999999999853 25899999999999999999999992122999999999999986 77899999
Q ss_pred ccCccccCCCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhc
Q 006907 450 FGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEE 529 (626)
Q Consensus 450 fG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~ 529 (626)
||++........ ....||+.|+|||.+.+..++.++||||||+++|||++|+.||........ ......
T Consensus 160 fg~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-------~~~~~~- 228 (271)
T 3dtc_A 160 FGLAREWHRTTK---MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAV-------AYGVAM- 228 (271)
T ss_dssp CCC----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHH-------HHHHHT-
T ss_pred CCcccccccccc---cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-------HHhhhc-
Confidence 999986543322 234589999999999999999999999999999999999999975432111 111111
Q ss_pred cccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 006907 530 RRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVL 580 (626)
Q Consensus 530 ~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l 580 (626)
.......+...+..+.+++.+||+.||++|||+.|+++.|+.+
T Consensus 229 --------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 229 --------NKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp --------SCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred --------CCCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 1111122334457899999999999999999999999999764
No 70
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.2e-42 Score=353.79 Aligned_cols=252 Identities=20% Similarity=0.273 Sum_probs=206.3
Q ss_pred hCCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCCcccHHHHHHHHHHHHhccCCcccceeeeeecCCceEEEEee
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPY 380 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E~ 380 (626)
.++|.+.+.||+|+||.||++... +++.||+|.++... .....+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 357888999999999999999864 57889999987543 3345688999999999999999999999999999999999
Q ss_pred cCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC--CCcEEEeeccCccccCC
Q 006907 381 MPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDE--SFEAVVGDFGLAKLLDR 458 (626)
Q Consensus 381 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~--~~~~ki~DfG~a~~~~~ 458 (626)
+++|+|.+++... ...+++..+..++.|++.||.|||++ +|+||||||+|||++. ++.+||+|||++.....
T Consensus 83 ~~g~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~ 156 (321)
T 1tki_A 83 ISGLDIFERINTS---AFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP 156 (321)
T ss_dssp CCCCBHHHHHTSS---SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCT
T ss_pred CCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCC
Confidence 9999999999642 33589999999999999999999999 9999999999999987 78999999999987654
Q ss_pred CCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhcccccccccc
Q 006907 459 RDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDR 538 (626)
Q Consensus 459 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 538 (626)
.. ......||+.|+|||++.+..++.++||||||+++|+|++|+.||....... +. ........ . .+.
T Consensus 157 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~----~~---~~i~~~~~-~--~~~ 224 (321)
T 1tki_A 157 GD--NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQ----II---ENIMNAEY-T--FDE 224 (321)
T ss_dssp TC--EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHH----HH---HHHHHTCC-C--CCH
T ss_pred CC--ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHH----HH---HHHHcCCC-C--CCh
Confidence 32 2344569999999999998889999999999999999999999997544221 11 11111100 0 000
Q ss_pred ccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 539 DLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 539 ~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
... ...+.++.+++.+||+.||++|||+.|+++.
T Consensus 225 ~~~----~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 225 EAF----KEISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp HHH----TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred hhh----ccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 000 1234678999999999999999999999984
No 71
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=3.4e-41 Score=344.49 Aligned_cols=263 Identities=17% Similarity=0.200 Sum_probs=212.1
Q ss_pred hCCCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCCcccHHHHHHHHHHHHhc-cCCcccceeeeeecCCceEEEEe
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLA-LHRNLLRLYGFCMTPEERLLVYP 379 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv~E 379 (626)
.++|.+.+.||+|+||.||+|.. .+++.||+|++.... ....+.+|+++++.+ +|+|++++++++.+....++|||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e 86 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID 86 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence 45788999999999999999985 568899999987543 234578899999998 79999999999999999999999
Q ss_pred ecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCc-----EEEeeccCcc
Q 006907 380 YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFE-----AVVGDFGLAK 454 (626)
Q Consensus 380 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~-----~ki~DfG~a~ 454 (626)
|+ +++|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++. +||+|||++.
T Consensus 87 ~~-~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~ 159 (298)
T 1csn_A 87 LL-GPSLEDLLDLC---GRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK 159 (298)
T ss_dssp CC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCE
T ss_pred ec-CCCHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECcccc
Confidence 99 99999999753 23589999999999999999999999 9999999999999987776 9999999998
Q ss_pred ccCCCCCc------eeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhh
Q 006907 455 LLDRRDSH------VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHE 528 (626)
Q Consensus 455 ~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~ 528 (626)
........ ......||+.|+|||.+.+..++.++||||||+++|||++|+.||...........+........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~- 238 (298)
T 1csn_A 160 FYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQ- 238 (298)
T ss_dssp ESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHH-
T ss_pred ccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhcc-
Confidence 76544321 22345699999999999999999999999999999999999999986543322211111111110
Q ss_pred ccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccc
Q 006907 529 ERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEP 583 (626)
Q Consensus 529 ~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~ 583 (626)
.... +.. ....+..+.+++.+||+.||++|||+++|++.|+++...
T Consensus 239 ~~~~-----~~~----~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~ 284 (298)
T 1csn_A 239 STPL-----REL----CAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLER 284 (298)
T ss_dssp HSCH-----HHH----TTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred CccH-----HHH----HhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHh
Confidence 0000 000 112347789999999999999999999999999988764
No 72
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=2.3e-41 Score=358.62 Aligned_cols=256 Identities=23% Similarity=0.274 Sum_probs=203.1
Q ss_pred hCCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCCcc---cHHHHHHHHHHHHhc-cCCcccceeeeeecCCceEE
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNFT---GEVQFQTEVEMIGLA-LHRNLLRLYGFCMTPEERLL 376 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~l 376 (626)
.++|.+.++||+|+||+||++... +++.||+|+++..... ....+..|..++.++ +||||+++++++.+.+..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 457889999999999999999865 5788999999754322 223578899999877 89999999999999999999
Q ss_pred EEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCcccc
Q 006907 377 VYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL 456 (626)
Q Consensus 377 v~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~ 456 (626)
||||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++++||+|||+++..
T Consensus 131 V~E~~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~ 203 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQR----KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 203 (396)
T ss_dssp EEECCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEcCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeec
Confidence 999999999999997642 489999999999999999999999 9999999999999999999999999999853
Q ss_pred CCCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCccccc-ccHHHHHHHhhhccccccc
Q 006907 457 DRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQK-GMILDCVRTLHEERRLDVL 535 (626)
Q Consensus 457 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~ 535 (626)
... ........||+.|+|||++.+..++.++|||||||++|||++|+.||......... ....+.........
T Consensus 204 ~~~-~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~----- 277 (396)
T 4dc2_A 204 LRP-GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK----- 277 (396)
T ss_dssp CCT-TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHC-----
T ss_pred ccC-CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcc-----
Confidence 322 22334556999999999999999999999999999999999999999743322111 10111111111111
Q ss_pred cccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCH------HHHHH
Q 006907 536 IDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKM------SEVLK 575 (626)
Q Consensus 536 ~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~------~evl~ 575 (626)
...++...+.++.+++.+||+.||++||++ +|+++
T Consensus 278 -----~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~ 318 (396)
T 4dc2_A 278 -----QIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG 318 (396)
T ss_dssp -----CCCCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHH
T ss_pred -----ccCCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhc
Confidence 112333445778999999999999999985 56655
No 73
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=3.2e-41 Score=342.98 Aligned_cols=253 Identities=29% Similarity=0.518 Sum_probs=203.8
Q ss_pred hCCCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCCcccH-------HHHHHHHHHHHhccCCcccceeeeeecCCc
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPNFTGE-------VQFQTEVEMIGLALHRNLLRLYGFCMTPEE 373 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~-------~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 373 (626)
.++|.+.+.||+|+||.||+|.. .+++.||+|++........ ..+.+|+++++.++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 35788899999999999999986 4688999999875433221 56889999999999999999999986654
Q ss_pred eEEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCcEEeCCCCc-----EE
Q 006907 374 RLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPK--IIHRDVKAANILLDESFE-----AV 446 (626)
Q Consensus 374 ~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~--ivH~Dlkp~NILl~~~~~-----~k 446 (626)
++||||+++|+|.+++... ...+++..+..++.|++.||+|||++ + |+||||||+||+++.++. +|
T Consensus 97 -~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~k 169 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDK---AHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAK 169 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCT---TSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEE
T ss_pred -eEEEEecCCCCHHHHHhcc---cCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEE
Confidence 7999999999999988643 34699999999999999999999998 7 999999999999988776 99
Q ss_pred EeeccCccccCCCCCceeeeecccCCccCccccc--cCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHH
Q 006907 447 VGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLS--TGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVR 524 (626)
Q Consensus 447 i~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~ 524 (626)
|+|||++..... ......||+.|+|||.+. ...++.++||||||+++|||++|+.||........ ....
T Consensus 170 l~Dfg~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-----~~~~ 240 (287)
T 4f0f_A 170 VADFGLSQQSVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI-----KFIN 240 (287)
T ss_dssp ECCCTTCBCCSS----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHH-----HHHH
T ss_pred eCCCCccccccc----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHH-----HHHH
Confidence 999999975432 233456899999999994 45578999999999999999999999975432211 1111
Q ss_pred HhhhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 006907 525 TLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVL 580 (626)
Q Consensus 525 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l 580 (626)
.... .......+...+..+.+++.+||+.||++|||++|+++.|+++
T Consensus 241 ~~~~---------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 241 MIRE---------EGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp HHHH---------SCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred HHhc---------cCCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 1111 1112223344557899999999999999999999999999864
No 74
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.4e-41 Score=362.54 Aligned_cols=264 Identities=20% Similarity=0.232 Sum_probs=212.0
Q ss_pred cchHHHHHHhCCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCCc---ccHHHHHHHHHHHHhccCCcccceeeee
Q 006907 293 FSFRELQIATGNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNF---TGEVQFQTEVEMIGLALHRNLLRLYGFC 368 (626)
Q Consensus 293 ~~~~~~~~~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~ 368 (626)
+.+++.....++|++.++||+|+||.||++... +++.||+|++++... .....+.+|..++..++||||+++++++
T Consensus 51 ~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~ 130 (412)
T 2vd5_A 51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF 130 (412)
T ss_dssp HHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred hhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence 345566677889999999999999999999864 689999999964321 1223478899999999999999999999
Q ss_pred ecCCceEEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEe
Q 006907 369 MTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVG 448 (626)
Q Consensus 369 ~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~ 448 (626)
.+.+..++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++++||+
T Consensus 131 ~~~~~~~lVmE~~~gg~L~~~l~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~ 204 (412)
T 2vd5_A 131 QDENYLYLVMEYYVGGDLLTLLSKFG---ERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLA 204 (412)
T ss_dssp ECSSEEEEEECCCCSCBHHHHHHHHS---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEEC
T ss_pred eeCCEEEEEEcCCCCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEe
Confidence 99999999999999999999997642 2589999999999999999999999 99999999999999999999999
Q ss_pred eccCccccCCCCCceeeeecccCCccCccccc-------cCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHH
Q 006907 449 DFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLS-------TGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILD 521 (626)
Q Consensus 449 DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~ 521 (626)
|||++...............||+.|+|||++. +..++.++|||||||++|||++|+.||...+.......+..
T Consensus 205 DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~ 284 (412)
T 2vd5_A 205 DFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVH 284 (412)
T ss_dssp CCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT
T ss_pred echhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence 99999877654443344457999999999997 35689999999999999999999999986543322222221
Q ss_pred HHHHhhhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCC---CCHHHHHHH
Q 006907 522 CVRTLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLR---PKMSEVLKV 576 (626)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~R---Ps~~evl~~ 576 (626)
+.... .. + ..+...+.++.+++.+||. +|++| |+++|+++.
T Consensus 285 ~~~~~----~~-----p----~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 285 YKEHL----SL-----P----LVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp HHHHC----CC-----C--------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred cccCc----CC-----C----ccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 11000 00 0 0112345788999999999 99998 589999873
No 75
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=1.8e-41 Score=341.21 Aligned_cols=252 Identities=22% Similarity=0.353 Sum_probs=205.5
Q ss_pred CCCCcCceeccCCCceEEEEEeCCccEEEEEEecCCCcc--cHHHHHHHHHHHHhccCCcccceeeeeecC--CceEEEE
Q 006907 303 GNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFT--GEVQFQTEVEMIGLALHRNLLRLYGFCMTP--EERLLVY 378 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~lv~ 378 (626)
++|.+.+.||+|+||.||+|... ++.||+|+++..... ....+.+|+.++++++||||+++++++.+. ...++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 46888999999999999999885 778999999865432 345689999999999999999999999887 7789999
Q ss_pred eecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCcEEeCCCCcEEEeeccCcccc
Q 006907 379 PYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPK--IIHRDVKAANILLDESFEAVVGDFGLAKLL 456 (626)
Q Consensus 379 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~--ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~ 456 (626)
||+++|+|.+++... ....+++..+..++.|++.||.|||+. + |+||||||+||++++++.++|+|||++...
T Consensus 89 e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~ 163 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEG--TNFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKFSF 163 (271)
T ss_dssp ECCTTCBHHHHHHSC--SSCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTT
T ss_pred cccCCCcHHHHHhhc--ccCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccceeee
Confidence 999999999999753 233689999999999999999999998 7 999999999999999999999999987643
Q ss_pred CCCCCceeeeecccCCccCccccccCCCCc---cchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccccc
Q 006907 457 DRRDSHVTTAVRGTVGHIAPEYLSTGQSSE---KTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLD 533 (626)
Q Consensus 457 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~---~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~ 533 (626)
... ...||+.|+|||.+.+..++. ++||||||+++|||++|+.||........ ......
T Consensus 164 ~~~------~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-------~~~~~~----- 225 (271)
T 3kmu_A 164 QSP------GRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEI-------GMKVAL----- 225 (271)
T ss_dssp SCT------TCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHH-------HHHHHH-----
T ss_pred ccc------CccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHH-------HHHHHh-----
Confidence 322 234899999999998765444 89999999999999999999975432111 111111
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccc
Q 006907 534 VLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVE 582 (626)
Q Consensus 534 ~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~ 582 (626)
.......+...+..+.+++.+||+.||++|||++|+++.|+.+.+
T Consensus 226 ----~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 226 ----EGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp ----SCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred ----cCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 111112233445789999999999999999999999999988754
No 76
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=6.3e-41 Score=344.56 Aligned_cols=260 Identities=28% Similarity=0.463 Sum_probs=201.8
Q ss_pred CCCCcCceeccCCCceEEEEEeCCccEEEEEEecCCCcccHHHHHHHHHHHHhccCCcccceeeeeecCCceEEEEeecC
Q 006907 303 GNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPYMP 382 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E~~~ 382 (626)
++|++.+.||+|+||.||+|.+. ++.||+|++... .....+.+|++++++++||||+++++++.+ ..++||||++
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~ 82 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAE 82 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCT
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCC
Confidence 46778899999999999999875 677999998653 234578999999999999999999998874 4799999999
Q ss_pred CCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCc-EEEeeccCccccCCCCC
Q 006907 383 NGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFE-AVVGDFGLAKLLDRRDS 461 (626)
Q Consensus 383 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~-~ki~DfG~a~~~~~~~~ 461 (626)
+|+|.+++.... ....+++..+..++.|+++||+|||+.+..+|+||||||+||+++.++. +||+|||++......
T Consensus 83 ~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~-- 159 (307)
T 2eva_A 83 GGSLYNVLHGAE-PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH-- 159 (307)
T ss_dssp TCBHHHHHHCSS-SEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC---------
T ss_pred CCCHHHHHhccC-CCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc--
Confidence 999999997532 2235789999999999999999999932238999999999999998876 799999999755432
Q ss_pred ceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccccccccccccC
Q 006907 462 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDRDLK 541 (626)
Q Consensus 462 ~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~ 541 (626)
.....||+.|+|||.+.+..++.++||||||+++|||++|+.||....... ............
T Consensus 160 --~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-----~~~~~~~~~~~~---------- 222 (307)
T 2eva_A 160 --MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA-----FRIMWAVHNGTR---------- 222 (307)
T ss_dssp -------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSH-----HHHHHHHHTTCC----------
T ss_pred --cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccH-----HHHHHHHhcCCC----------
Confidence 123358999999999999999999999999999999999999997533211 111111111111
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccchhhh
Q 006907 542 GSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEPVTEE 587 (626)
Q Consensus 542 ~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~~~~~ 587 (626)
.......+..+.+++.+||+.||++|||++|+++.|+.+.......
T Consensus 223 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~ 268 (307)
T 2eva_A 223 PPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGA 268 (307)
T ss_dssp CCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCCT
T ss_pred CCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhccCC
Confidence 1112233467899999999999999999999999999887665443
No 77
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=1e-41 Score=353.07 Aligned_cols=252 Identities=23% Similarity=0.318 Sum_probs=202.4
Q ss_pred CCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCCcc-cHHHHHHHHHHHHhccCCcccceeeeeecCCceEEEEee
Q 006907 303 GNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNFT-GEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPY 380 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E~ 380 (626)
++|++.+.||+|+||.||+|... +++.||+|++...... ....+.+|+.+++.++||||+++++++.+++..++||||
T Consensus 7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 86 (323)
T 3tki_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86 (323)
T ss_dssp TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEc
Confidence 57889999999999999999865 6889999998754322 245688999999999999999999999999999999999
Q ss_pred cCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccCCCC
Q 006907 381 MPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRD 460 (626)
Q Consensus 381 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~ 460 (626)
+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++..+....
T Consensus 87 ~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 159 (323)
T 3tki_A 87 CSGGELFDRIEP----DIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 159 (323)
T ss_dssp CTTEEGGGGSBT----TTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETT
T ss_pred CCCCcHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceeccCC
Confidence 999999999864 23589999999999999999999999 99999999999999999999999999998654322
Q ss_pred C-ceeeeecccCCccCccccccCCC-CccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhcccccccccc
Q 006907 461 S-HVTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDR 538 (626)
Q Consensus 461 ~-~~~~~~~gt~~y~aPE~~~~~~~-t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 538 (626)
. .......||+.|+|||++.+..+ +.++||||||+++|||++|+.||........ ....+. ....
T Consensus 160 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~--~~~~~~----~~~~------- 226 (323)
T 3tki_A 160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ--EYSDWK----EKKT------- 226 (323)
T ss_dssp EECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSH--HHHHHH----TTCT-------
T ss_pred cccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHH--HHHHHh----cccc-------
Confidence 2 12234569999999999987765 7899999999999999999999975443211 111111 0000
Q ss_pred ccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 539 DLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 539 ~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
........+..+.+++.+||+.||++|||+.|+++.
T Consensus 227 --~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 227 --YLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp --TSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred --cCCccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 000012234678899999999999999999999874
No 78
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=7.3e-42 Score=350.27 Aligned_cols=263 Identities=24% Similarity=0.381 Sum_probs=207.9
Q ss_pred CCCCcCceeccCCCceEEEEEe-----CCccEEEEEEecCCC-cccHHHHHHHHHHHHhccCCcccceeeeeecC--Cce
Q 006907 303 GNFSPKNILGQGGYGVVYKGCL-----PNRMVVAVKRLKDPN-FTGEVQFQTEVEMIGLALHRNLLRLYGFCMTP--EER 374 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~ 374 (626)
..|++.+.||+|+||.||+|.+ .+++.||+|+++... ......+.+|+++++.++||||+++++++.+. ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 3477889999999999999984 357899999997543 23346789999999999999999999999876 668
Q ss_pred EEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCcc
Q 006907 375 LLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAK 454 (626)
Q Consensus 375 ~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~ 454 (626)
++||||+++|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.
T Consensus 101 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 174 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKNK---NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTK 174 (302)
T ss_dssp EEEEECCTTCBHHHHHHHHT---TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred EEEEEeCCCCcHHHHHHhcc---ccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECcccccc
Confidence 99999999999999996543 3489999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCc--eeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcc--------cccccHHHHHH
Q 006907 455 LLDRRDSH--VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQ--------VQKGMILDCVR 524 (626)
Q Consensus 455 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~--------~~~~~i~~~~~ 524 (626)
........ ......||..|+|||.+.+..++.++||||||+++|||++|+.|+...... ...........
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (302)
T 4e5w_A 175 AIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVN 254 (302)
T ss_dssp ECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHH
T ss_pred cccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHH
Confidence 77554332 122345788899999999999999999999999999999999987532100 00000011111
Q ss_pred HhhhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcc
Q 006907 525 TLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLV 581 (626)
Q Consensus 525 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~ 581 (626)
... .......+...+..+.+++.+||+.||++|||+.|+++.|+.++
T Consensus 255 ~~~----------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 255 TLK----------EGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHH----------TTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHh----------ccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 111 11122233445678999999999999999999999999999875
No 79
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=5.9e-42 Score=356.19 Aligned_cols=269 Identities=23% Similarity=0.362 Sum_probs=216.0
Q ss_pred HHHHHhCCCCcCceeccCCCceEEEEEeCC------ccEEEEEEecCCCcc-cHHHHHHHHHHHHhc-cCCcccceeeee
Q 006907 297 ELQIATGNFSPKNILGQGGYGVVYKGCLPN------RMVVAVKRLKDPNFT-GEVQFQTEVEMIGLA-LHRNLLRLYGFC 368 (626)
Q Consensus 297 ~~~~~~~~f~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~nIv~l~~~~ 368 (626)
+++...++|.+.+.||+|+||.||+|.... ...||+|.++..... ....+.+|+++++.+ +||||+++++++
T Consensus 40 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 119 (333)
T 2i1m_A 40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGAC 119 (333)
T ss_dssp GGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred cccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 345567789999999999999999998642 247999999765432 345689999999999 899999999999
Q ss_pred ecCCceEEEEeecCCCChHHHHhhccC----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEE
Q 006907 369 MTPEERLLVYPYMPNGSVADCLRDTRQ----------AKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANIL 438 (626)
Q Consensus 369 ~~~~~~~lv~E~~~~gsL~~~l~~~~~----------~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIL 438 (626)
.+.+..++||||+++|+|.+++..... ....+++..+..++.|++.||.|||++ +|+||||||+||+
T Consensus 120 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl 196 (333)
T 2i1m_A 120 THGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVL 196 (333)
T ss_dssp CSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCE
T ss_pred ecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEE
Confidence 999999999999999999999975421 134589999999999999999999999 9999999999999
Q ss_pred eCCCCcEEEeeccCccccCCCCCc-eeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHh-CCCcCCCCCccccc
Q 006907 439 LDESFEAVVGDFGLAKLLDRRDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNGQVQK 516 (626)
Q Consensus 439 l~~~~~~ki~DfG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~ 516 (626)
++.++.+||+|||++......... ......+|+.|+|||.+.+..++.++||||||+++|||++ |..||........
T Consensus 197 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~- 275 (333)
T 2i1m_A 197 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK- 275 (333)
T ss_dssp EEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHH-
T ss_pred ECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHH-
Confidence 999999999999999866443322 2233447889999999999999999999999999999999 9999975432211
Q ss_pred ccHHHHHHHhhhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccch
Q 006907 517 GMILDCVRTLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEPV 584 (626)
Q Consensus 517 ~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~~ 584 (626)
........ .....+...+..+.+++.+||+.||.+|||+.|+++.|+.+....
T Consensus 276 --~~~~~~~~-------------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 328 (333)
T 2i1m_A 276 --FYKLVKDG-------------YQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 328 (333)
T ss_dssp --HHHHHHHT-------------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred --HHHHHhcC-------------CCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhh
Confidence 11111110 111112223477899999999999999999999999999876543
No 80
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=2.1e-41 Score=343.28 Aligned_cols=259 Identities=22% Similarity=0.374 Sum_probs=206.7
Q ss_pred HhCCCCcCceeccCCCceEEEEEeCC----ccEEEEEEecCCC-cccHHHHHHHHHHHHhccCCcccceeeeeecCCceE
Q 006907 301 ATGNFSPKNILGQGGYGVVYKGCLPN----RMVVAVKRLKDPN-FTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERL 375 (626)
Q Consensus 301 ~~~~f~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 375 (626)
..++|.+.+.||+|+||.||+|.+.+ +..||+|.++... ......+.+|+++++.++||||+++++++.+ +..+
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~ 88 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTW 88 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCE
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCE
Confidence 34578889999999999999998532 3469999987653 2345678999999999999999999999865 4568
Q ss_pred EEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccc
Q 006907 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKL 455 (626)
Q Consensus 376 lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~ 455 (626)
+||||+++++|.+++.... ..+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||++..
T Consensus 89 ~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 162 (281)
T 3cc6_A 89 IIMELYPYGELGHYLERNK---NSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRY 162 (281)
T ss_dssp EEEECCTTCBHHHHHHHHT---TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGC
T ss_pred EEEecCCCCCHHHHHHhcc---ccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCcc
Confidence 9999999999999997642 3589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHh-CCCcCCCCCcccccccHHHHHHHhhhcccccc
Q 006907 456 LDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNGQVQKGMILDCVRTLHEERRLDV 534 (626)
Q Consensus 456 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 534 (626)
.............+|+.|+|||.+.+..++.++||||||+++|||++ |+.||....... ...... ....
T Consensus 163 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~----~~~~~~---~~~~--- 232 (281)
T 3cc6_A 163 IEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD----VIGVLE---KGDR--- 232 (281)
T ss_dssp C---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG----HHHHHH---HTCC---
T ss_pred cccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH----HHHHHh---cCCC---
Confidence 65543333344457889999999999999999999999999999998 999997543322 111111 1111
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccc
Q 006907 535 LIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEP 583 (626)
Q Consensus 535 ~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~ 583 (626)
...+...++.+.+++.+||+.||++|||+.|+++.|+.+...
T Consensus 233 -------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 274 (281)
T 3cc6_A 233 -------LPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM 274 (281)
T ss_dssp -------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -------CCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHh
Confidence 111223346789999999999999999999999999987654
No 81
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=4.3e-41 Score=343.10 Aligned_cols=266 Identities=21% Similarity=0.266 Sum_probs=203.4
Q ss_pred CCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCCcc--cHHHHHHHHHHHHhccCCcccceeeeeecCCceEEEEe
Q 006907 303 GNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNFT--GEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYP 379 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E 379 (626)
++|++.+.||+|+||+||+|... +++.||+|+++..... ....+.+|++++++++||||+++++++.+++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 46888999999999999999864 5889999999754432 23568899999999999999999999999999999999
Q ss_pred ecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccCCC
Q 006907 380 YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRR 459 (626)
Q Consensus 380 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~ 459 (626)
|+++ ++.+++... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++......
T Consensus 82 ~~~~-~l~~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 154 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSC---NGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIP 154 (292)
T ss_dssp CCSE-EHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSC
T ss_pred cCCC-CHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCc
Confidence 9976 666666542 23599999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCceeeeecccCCccCccccccCC-CCccchhHHHHHHHHHHHhCCCcCCCCCcc-cccccHHHHHHHhhhcccccccc-
Q 006907 460 DSHVTTAVRGTVGHIAPEYLSTGQ-SSEKTDVFGFGVLLLELITGQKALDVGNGQ-VQKGMILDCVRTLHEERRLDVLI- 536 (626)
Q Consensus 460 ~~~~~~~~~gt~~y~aPE~~~~~~-~t~~~DvwSlGvil~elltg~~p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~- 536 (626)
.. ......||+.|+|||++.+.. ++.++||||||+++|||++|+.||...... .....+...........+.....
T Consensus 155 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 233 (292)
T 3o0g_A 155 VR-CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKL 233 (292)
T ss_dssp CS-CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGS
T ss_pred cc-cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccc
Confidence 22 223445899999999998766 799999999999999999998886543321 11111111111111111110000
Q ss_pred -c---------cccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 537 -D---------RDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 537 -~---------~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
+ ........+..+..+.+++.+||+.||++|||++|+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 234 PDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp TTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0 000111223455788999999999999999999999874
No 82
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.7e-41 Score=352.69 Aligned_cols=246 Identities=20% Similarity=0.327 Sum_probs=203.3
Q ss_pred CCCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCC---cccHHHHHHHHHHHHhccCCcccceeeeeecCCceEEEE
Q 006907 303 GNFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPN---FTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVY 378 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 378 (626)
++|.+.+.||+|+||.||+|.. .+++.||+|++.... ......+.+|+.+++.++||||+++++++.++...++||
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 88 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI 88 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5788899999999999999986 568899999986432 112346889999999999999999999999999999999
Q ss_pred eecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccCC
Q 006907 379 PYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDR 458 (626)
Q Consensus 379 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~ 458 (626)
||+ +|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+|||+++++.+||+|||++.....
T Consensus 89 E~~-~g~l~~~l~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~ 160 (336)
T 3h4j_B 89 EYA-GGELFDYIVEKK----RMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTD 160 (336)
T ss_dssp CCC-CEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTT
T ss_pred ECC-CCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccC
Confidence 999 789999987642 489999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCceeeeecccCCccCccccccCCC-CccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccccccccc
Q 006907 459 RDSHVTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLID 537 (626)
Q Consensus 459 ~~~~~~~~~~gt~~y~aPE~~~~~~~-t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 537 (626)
.. ......||+.|+|||++.+..+ +.++||||||+++|+|++|+.||...........+ .
T Consensus 161 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i----------------~- 221 (336)
T 3h4j_B 161 GN--FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKV----------------N- 221 (336)
T ss_dssp SB--TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCC----------------C-
T ss_pred Cc--ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHH----------------H-
Confidence 32 2234469999999999988775 78999999999999999999999754322211100 0
Q ss_pred cccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 538 RDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 538 ~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
......+...+..+.+++.+||+.||++|||++|+++.
T Consensus 222 -~~~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 222 -SCVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp -SSCCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred -cCCCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 00112233345778999999999999999999999884
No 83
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=4.3e-41 Score=352.45 Aligned_cols=254 Identities=20% Similarity=0.257 Sum_probs=204.9
Q ss_pred CCCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCC-----cccHHHHHHHHHHHHhccCCcccceeeeeecCCceEE
Q 006907 303 GNFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPN-----FTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLL 376 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 376 (626)
+.|.+.+.||+|+||.||+|.. .+++.||+|++.... ......+.+|+++++.++||||+++++++.+.+..++
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 103 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM 103 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 4688899999999999999986 458899999985321 1235678999999999999999999999999999999
Q ss_pred EEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCc---EEEeeccCc
Q 006907 377 VYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFE---AVVGDFGLA 453 (626)
Q Consensus 377 v~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~---~ki~DfG~a 453 (626)
||||+++|+|.+++.........+++..+..++.|++.||.|||++ +|+||||||+|||++.++. +||+|||++
T Consensus 104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a 180 (351)
T 3c0i_A 104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVA 180 (351)
T ss_dssp EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcce
Confidence 9999999999998876544455689999999999999999999999 9999999999999986554 999999999
Q ss_pred cccCCCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccccc
Q 006907 454 KLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLD 533 (626)
Q Consensus 454 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~ 533 (626)
........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+.. ...... ..
T Consensus 181 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-----~~~~---~i~~~~-~~ 250 (351)
T 3c0i_A 181 IQLGESGL-VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE-----RLFE---GIIKGK-YK 250 (351)
T ss_dssp EECCTTSC-BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH-----HHHH---HHHHTC-CC
T ss_pred eEecCCCe-eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH-----HHHH---HHHcCC-CC
Confidence 87654322 23344699999999999998999999999999999999999999975321 1111 111100 00
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006907 534 VLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLK 575 (626)
Q Consensus 534 ~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 575 (626)
..+... ...+..+.+++.+||+.||++|||+.|+++
T Consensus 251 --~~~~~~----~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 251 --MNPRQW----SHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp --CCHHHH----TTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred --CCcccc----ccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 000000 112467899999999999999999999987
No 84
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=2e-41 Score=351.18 Aligned_cols=259 Identities=24% Similarity=0.393 Sum_probs=205.3
Q ss_pred CCCCcCceeccCCCceEEEEEeC-Ccc----EEEEEEecCCC-cccHHHHHHHHHHHHhccCCcccceeeeeecCCceEE
Q 006907 303 GNFSPKNILGQGGYGVVYKGCLP-NRM----VVAVKRLKDPN-FTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLL 376 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 376 (626)
++|.+.++||+|+||.||+|.+. +++ .||+|.+.... ......+.+|+.+++.++||||+++++++. .+..++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 46788899999999999999854 343 38888886543 222346788999999999999999999986 467899
Q ss_pred EEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCcccc
Q 006907 377 VYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL 456 (626)
Q Consensus 377 v~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~ 456 (626)
||||+++|+|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++...
T Consensus 92 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~ 165 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQH---RGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLL 165 (325)
T ss_dssp EEECCTTCBSHHHHHSS---GGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGGS
T ss_pred EEEeCCCCCHHHHHHHc---cccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCccccc
Confidence 99999999999999753 23588999999999999999999999 9999999999999999999999999999877
Q ss_pred CCCCCc-eeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHh-CCCcCCCCCcccccccHHHHHHHhhhcccccc
Q 006907 457 DRRDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNGQVQKGMILDCVRTLHEERRLDV 534 (626)
Q Consensus 457 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 534 (626)
...... ......+|..|+|||.+.+..++.++||||||+++|||++ |+.||....... +...... ...
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~----~~~~~~~---~~~--- 235 (325)
T 3kex_A 166 PPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE----VPDLLEK---GER--- 235 (325)
T ss_dssp CCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTH----HHHHHHT---TCB---
T ss_pred CcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHH----HHHHHHc---CCC---
Confidence 544332 2334557889999999999999999999999999999999 999997544221 1111111 111
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccchh
Q 006907 535 LIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEPVT 585 (626)
Q Consensus 535 ~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~~~ 585 (626)
...+...+..+.+++.+||+.||++|||+.|+++.|+.+.....
T Consensus 236 -------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~~~ 279 (325)
T 3kex_A 236 -------LAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARDPP 279 (325)
T ss_dssp -------CCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTSHH
T ss_pred -------CCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcch
Confidence 11112233457899999999999999999999999999876543
No 85
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=2.3e-41 Score=350.97 Aligned_cols=249 Identities=22% Similarity=0.284 Sum_probs=196.2
Q ss_pred hCCCCcCceeccCCCceEEEEEe----CCccEEEEEEecCCCc----ccHHHHHHHHHHHHhccCCcccceeeeeecCCc
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCL----PNRMVVAVKRLKDPNF----TGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEE 373 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 373 (626)
.++|.+.+.||+|+||.||++.. .+++.||+|+++.... .....+.+|+++++.++||||+++++++.+.+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 45688899999999999999986 4688999999986532 223457889999999999999999999999999
Q ss_pred eEEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCc
Q 006907 374 RLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLA 453 (626)
Q Consensus 374 ~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a 453 (626)
.++||||+++|+|.+++.... .+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||++
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~ 168 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREG----IFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLC 168 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC
T ss_pred EEEEEeCCCCCcHHHHHHhCC----CCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCcc
Confidence 999999999999999997632 488999999999999999999999 9999999999999999999999999998
Q ss_pred cccCCCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccccc
Q 006907 454 KLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLD 533 (626)
Q Consensus 454 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~ 533 (626)
....... .......||+.|+|||++.+..++.++||||||+++|||++|+.||...+.... .......
T Consensus 169 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-------~~~i~~~---- 236 (327)
T 3a62_A 169 KESIHDG-TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKT-------IDKILKC---- 236 (327)
T ss_dssp -----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-------HHHHHHT----
T ss_pred cccccCC-ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHH-------HHHHHhC----
Confidence 7543322 222344689999999999999999999999999999999999999975442211 1111110
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 006907 534 VLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRP-----KMSEVLKV 576 (626)
Q Consensus 534 ~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RP-----s~~evl~~ 576 (626)
...++...+..+.+++.+||+.||++|| ++.|+++.
T Consensus 237 -------~~~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 237 -------KLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp -------CCCCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred -------CCCCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 0112233457789999999999999999 77788774
No 86
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=1.7e-41 Score=350.86 Aligned_cols=274 Identities=25% Similarity=0.403 Sum_probs=220.1
Q ss_pred hHHHHHHhCCCCcCceeccCCCceEEEEEeC------CccEEEEEEecCCCc-ccHHHHHHHHHHHHhccCCcccceeee
Q 006907 295 FRELQIATGNFSPKNILGQGGYGVVYKGCLP------NRMVVAVKRLKDPNF-TGEVQFQTEVEMIGLALHRNLLRLYGF 367 (626)
Q Consensus 295 ~~~~~~~~~~f~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~ 367 (626)
.+++++..++|.+.+.||+|+||.||+|... .+..||+|.+..... .....+.+|+++++.++||||++++++
T Consensus 17 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~ 96 (322)
T 1p4o_A 17 PDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGV 96 (322)
T ss_dssp CCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEE
T ss_pred hhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEE
Confidence 3445566788999999999999999999754 367899999975543 234468899999999999999999999
Q ss_pred eecCCceEEEEeecCCCChHHHHhhccC------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC
Q 006907 368 CMTPEERLLVYPYMPNGSVADCLRDTRQ------AKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDE 441 (626)
Q Consensus 368 ~~~~~~~~lv~E~~~~gsL~~~l~~~~~------~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~ 441 (626)
+.+.+..++||||+++|+|.+++..... ....+++..+..++.|++.||.|||++ +|+||||||+||+++.
T Consensus 97 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~ 173 (322)
T 1p4o_A 97 VSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAE 173 (322)
T ss_dssp ECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECT
T ss_pred EccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcC
Confidence 9999999999999999999999975321 124579999999999999999999999 9999999999999999
Q ss_pred CCcEEEeeccCccccCCCCCce-eeeecccCCccCccccccCCCCccchhHHHHHHHHHHHh-CCCcCCCCCcccccccH
Q 006907 442 SFEAVVGDFGLAKLLDRRDSHV-TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNGQVQKGMI 519 (626)
Q Consensus 442 ~~~~ki~DfG~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~i 519 (626)
++.+||+|||++.......... .....+|+.|+|||.+.+..++.++||||||+++|||++ |+.||.......
T Consensus 174 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~----- 248 (322)
T 1p4o_A 174 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ----- 248 (322)
T ss_dssp TCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHH-----
T ss_pred CCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHH-----
Confidence 9999999999998654332211 122346889999999999999999999999999999999 889987543211
Q ss_pred HHHHHHhhhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccchhhhh
Q 006907 520 LDCVRTLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEPVTEEM 588 (626)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~~~~~~ 588 (626)
.......... ...+...+..+.+++.+||+.||++|||+.|+++.|++.+.+...+.
T Consensus 249 --~~~~~~~~~~----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~~~~~~ 305 (322)
T 1p4o_A 249 --VLRFVMEGGL----------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV 305 (322)
T ss_dssp --HHHHHHTTCC----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTHHHH
T ss_pred --HHHHHHcCCc----------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhccCCccc
Confidence 1111111111 11223345778999999999999999999999999999888765553
No 87
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1.2e-41 Score=355.04 Aligned_cols=251 Identities=24% Similarity=0.352 Sum_probs=204.4
Q ss_pred HHHhCCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCC---cccHHHHHHHHHHHHhc-cCCcccceeeeeecCCc
Q 006907 299 QIATGNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPN---FTGEVQFQTEVEMIGLA-LHRNLLRLYGFCMTPEE 373 (626)
Q Consensus 299 ~~~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~ 373 (626)
....++|.+.++||+|+||.||+|... +++.||+|+++... ......+..|.+++..+ +||||+++++++.+.+.
T Consensus 13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~ 92 (345)
T 1xjd_A 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN 92 (345)
T ss_dssp ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence 455678999999999999999999864 58899999997532 12344577899999876 89999999999999999
Q ss_pred eEEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCc
Q 006907 374 RLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLA 453 (626)
Q Consensus 374 ~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a 453 (626)
.++||||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++
T Consensus 93 ~~lv~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a 165 (345)
T 1xjd_A 93 LFFVMEYLNGGDLMYHIQSCH----KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMC 165 (345)
T ss_dssp EEEEEECCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred EEEEEeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhh
Confidence 999999999999999997632 489999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccccc
Q 006907 454 KLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLD 533 (626)
Q Consensus 454 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~ 533 (626)
+...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...+... +.... ... .
T Consensus 166 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~----~~~~i---~~~-~-- 234 (345)
T 1xjd_A 166 KENMLGD-AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE----LFHSI---RMD-N-- 234 (345)
T ss_dssp BCCCCTT-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHH---HHC-C--
T ss_pred hhcccCC-CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHH----HHHHH---HhC-C--
Confidence 8643322 22344569999999999999999999999999999999999999997544221 11111 111 0
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHH-HHHH
Q 006907 534 VLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMS-EVLK 575 (626)
Q Consensus 534 ~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~-evl~ 575 (626)
..++...+.++.+++.+||+.||++||++. |+++
T Consensus 235 --------~~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~ 269 (345)
T 1xjd_A 235 --------PFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ 269 (345)
T ss_dssp --------CCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred --------CCCCcccCHHHHHHHHHHhcCCHhHcCCChHHHHc
Confidence 112223457789999999999999999997 6654
No 88
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=2e-41 Score=351.23 Aligned_cols=251 Identities=21% Similarity=0.294 Sum_probs=204.6
Q ss_pred CCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCCcc------cHHHHHHHHHHHHhccCCcccceeeeeecCCceE
Q 006907 303 GNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNFT------GEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERL 375 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 375 (626)
+.|.+.+.||+|+||.||++... ++..||+|+++..... ....+.+|+.+++.++||||+++++++.+....+
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 90 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 45888999999999999999864 5889999998754322 3567899999999999999999999999999999
Q ss_pred EEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCC----cEEEeecc
Q 006907 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESF----EAVVGDFG 451 (626)
Q Consensus 376 lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~----~~ki~DfG 451 (626)
+||||+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++ .+||+|||
T Consensus 91 lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg 163 (326)
T 2y0a_A 91 LILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163 (326)
T ss_dssp EEEECCCSCBHHHHHTT----SSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEEcCCCCCHHHHHHh----cCCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECC
Confidence 99999999999999964 23589999999999999999999999 999999999999999887 89999999
Q ss_pred CccccCCCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccc
Q 006907 452 LAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERR 531 (626)
Q Consensus 452 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~ 531 (626)
++........ .....||+.|+|||++.+..++.++||||||+++|+|++|+.||........ ........ ..
T Consensus 164 ~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~----~~~~~~~~--~~ 235 (326)
T 2y0a_A 164 LAHKIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET----LANVSAVN--YE 235 (326)
T ss_dssp TCEECCTTSC--CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHH----HHHHHHTC--CC
T ss_pred CCeECCCCCc--cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH----HHHHHhcC--CC
Confidence 9987653322 2334599999999999989999999999999999999999999975432211 11111100 00
Q ss_pred cccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 532 LDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 532 ~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
. .... ....+..+.+++.+||+.||++|||+.|+++.
T Consensus 236 ~----~~~~----~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 236 F----EDEY----FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp C----CHHH----HTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred c----Cccc----cccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0 0000 01224678899999999999999999999984
No 89
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=6.7e-41 Score=344.38 Aligned_cols=269 Identities=26% Similarity=0.328 Sum_probs=204.2
Q ss_pred HHhCCCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCCc-----ccHHHHHHHHHHHHhcc---CCcccceeeeeec
Q 006907 300 IATGNFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPNF-----TGEVQFQTEVEMIGLAL---HRNLLRLYGFCMT 370 (626)
Q Consensus 300 ~~~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~---h~nIv~l~~~~~~ 370 (626)
...++|++.+.||+|+||+||+|.. .+++.||+|+++.... .....+.+|+++++.++ ||||+++++++..
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~ 85 (308)
T 3g33_A 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCAT 85 (308)
T ss_dssp ----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEE
T ss_pred ccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeec
Confidence 4567899999999999999999985 5688999999863321 12345677888777665 9999999999987
Q ss_pred CC-----ceEEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcE
Q 006907 371 PE-----ERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEA 445 (626)
Q Consensus 371 ~~-----~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ 445 (626)
.. ..++||||+. ++|.+++.... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 86 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~ 159 (308)
T 3g33_A 86 SRTDREIKVTLVFEHVD-QDLRTYLDKAP--PPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTV 159 (308)
T ss_dssp CCSSSEEEEEEEEECCC-CBHHHHHHTCC--TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCE
T ss_pred cCCCCceeEEEEehhhh-cCHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCE
Confidence 65 4789999997 59999997532 33489999999999999999999999 99999999999999999999
Q ss_pred EEeeccCccccCCCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHH
Q 006907 446 VVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525 (626)
Q Consensus 446 ki~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~ 525 (626)
||+|||++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...........+.+....
T Consensus 160 kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~ 237 (308)
T 3g33_A 160 KLADFGLARIYSYQM--ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGL 237 (308)
T ss_dssp EECSCSCTTTSTTCC--CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCC
T ss_pred EEeeCccccccCCCc--ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence 999999998664332 223456899999999999999999999999999999999999999865543333333222222
Q ss_pred hhhcccccccccc--ccC--CC-----CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 526 LHEERRLDVLIDR--DLK--GS-----FDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 526 ~~~~~~~~~~~~~--~l~--~~-----~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
.....+......+ ... .. ..++.+..+.+++.+||+.||++|||+.|+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 238 PPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp CCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 2221111110000 000 00 011234788999999999999999999999874
No 90
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=3.2e-41 Score=348.21 Aligned_cols=245 Identities=25% Similarity=0.331 Sum_probs=204.4
Q ss_pred CCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCC---cccHHHHHHHHHHHHhccCCcccceeeeeecCCceEEEE
Q 006907 303 GNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPN---FTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVY 378 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 378 (626)
++|++.+.||+|+||.||++... +++.||+|+++... ......+.+|+.+++.++||||+++++++.+....++||
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~ 85 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 85 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence 46888999999999999999864 68899999997532 123456788999999999999999999999999999999
Q ss_pred eecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccCC
Q 006907 379 PYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDR 458 (626)
Q Consensus 379 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~ 458 (626)
||+++|+|.+++... ..+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||++.....
T Consensus 86 e~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~ 158 (318)
T 1fot_A 86 DYIEGGELFSLLRKS----QRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPD 158 (318)
T ss_dssp CCCCSCBHHHHHHHT----SSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSS
T ss_pred eCCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCC
Confidence 999999999999753 3489999999999999999999999 999999999999999999999999999986543
Q ss_pred CCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhcccccccccc
Q 006907 459 RDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDR 538 (626)
Q Consensus 459 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 538 (626)
. .....||+.|+|||++.+..++.++|||||||++|||++|+.||...+.... .......
T Consensus 159 ~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-------~~~i~~~--------- 218 (318)
T 1fot_A 159 V----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKT-------YEKILNA--------- 218 (318)
T ss_dssp C----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH-------HHHHHHC---------
T ss_pred c----cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHH-------HHHHHhC---------
Confidence 2 2345699999999999999999999999999999999999999975432211 1111111
Q ss_pred ccCCCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 006907 539 DLKGSFDPTELEKMVQLALQCTQSHPNLRP-----KMSEVLKV 576 (626)
Q Consensus 539 ~l~~~~~~~~~~~l~~l~~~cl~~~P~~RP-----s~~evl~~ 576 (626)
. ..++...+.++.+++.+|++.||++|| +++|+++.
T Consensus 219 ~--~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 219 E--LRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp C--CCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred C--CCCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence 0 112233457789999999999999999 88998863
No 91
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=7e-42 Score=354.85 Aligned_cols=274 Identities=27% Similarity=0.372 Sum_probs=212.4
Q ss_pred CCCCcCceeccCCCceEEEEEe-----CCccEEEEEEecCCCcccHHHHHHHHHHHHhccCCcccceeeeee--cCCceE
Q 006907 303 GNFSPKNILGQGGYGVVYKGCL-----PNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCM--TPEERL 375 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~--~~~~~~ 375 (626)
++|++.+.||+|+||.||++.+ .++..||||++..........+.+|++++++++||||+++++++. +....+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 102 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR 102 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence 4678889999999999999984 357899999998766555667999999999999999999999886 445688
Q ss_pred EEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccc
Q 006907 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKL 455 (626)
Q Consensus 376 lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~ 455 (626)
+||||+++++|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 103 lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 176 (327)
T 3lxl_A 103 LVMEYLPSGCLRDFLQRHRA---RLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKL 176 (327)
T ss_dssp EEEECCTTCBHHHHHHHHGG---GCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGCEE
T ss_pred EEEeecCCCCHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEccccccee
Confidence 99999999999999976432 489999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCce--eeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccccc
Q 006907 456 LDRRDSHV--TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLD 533 (626)
Q Consensus 456 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~ 533 (626)
........ .....+|+.|+|||.+.+..++.++||||||+++|+|++|+.||............ +...........
T Consensus 177 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~--~~~~~~~~~~~~ 254 (327)
T 3lxl_A 177 LPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMG--CERDVPALSRLL 254 (327)
T ss_dssp CCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC------CCHHHHHH
T ss_pred cccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcc--cccccccHHHHH
Confidence 65443321 22344788899999999988999999999999999999999998643211000000 000000000000
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccch
Q 006907 534 VLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEPV 584 (626)
Q Consensus 534 ~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~~ 584 (626)
...........+...+..+.+++.+||+.||++|||+.|+++.|+.+....
T Consensus 255 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 305 (327)
T 3lxl_A 255 ELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGS 305 (327)
T ss_dssp HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC----
T ss_pred HHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 111112222334455688999999999999999999999999999886653
No 92
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=4.9e-41 Score=361.95 Aligned_cols=254 Identities=19% Similarity=0.261 Sum_probs=205.3
Q ss_pred HhCCCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCCcc--cHHHHHHHHHHHHhccCCcccceeeeeecCCceEEE
Q 006907 301 ATGNFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPNFT--GEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLV 377 (626)
Q Consensus 301 ~~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv 377 (626)
..++|.+.+.||+|+||.||++.. .+++.+|+|++...... ....+.+|+++++.++||||+++++++.+++..++|
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 345788999999999999999975 56889999999765433 234688999999999999999999999999999999
Q ss_pred EeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeC---CCCcEEEeeccCcc
Q 006907 378 YPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLD---ESFEAVVGDFGLAK 454 (626)
Q Consensus 378 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~---~~~~~ki~DfG~a~ 454 (626)
|||+++|+|.+++... ..+++..+..++.|++.||.|||++ +|+||||||+|||++ +++.+||+|||++.
T Consensus 89 ~E~~~gg~L~~~i~~~----~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~ 161 (444)
T 3soa_A 89 FDLVTGGELFEDIVAR----EYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAI 161 (444)
T ss_dssp ECCCBCCBHHHHHHHC----SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCB
T ss_pred EEeCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeE
Confidence 9999999999999753 3589999999999999999999999 999999999999998 56789999999998
Q ss_pred ccCCCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhcccccc
Q 006907 455 LLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDV 534 (626)
Q Consensus 455 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 534 (626)
....... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||...+... +.... .... ..
T Consensus 162 ~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~----~~~~i---~~~~-~~- 231 (444)
T 3soa_A 162 EVEGEQQ-AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHR----LYQQI---KAGA-YD- 231 (444)
T ss_dssp CCCTTCC-BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH----HHHHH---HHTC-CC-
T ss_pred EecCCCc-eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHH----HHHHH---HhCC-CC-
Confidence 7654332 2234569999999999999899999999999999999999999997543211 11111 1110 00
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 535 LIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 535 ~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
.........++++.+++.+||+.||++|||+.|+++.
T Consensus 232 -----~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 232 -----FPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp -----CCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred -----CCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 0000112335778999999999999999999999984
No 93
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.7e-41 Score=345.68 Aligned_cols=250 Identities=24% Similarity=0.342 Sum_probs=196.8
Q ss_pred hCCCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCCcc--------------------------cHHHHHHHHHHHH
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPNFT--------------------------GEVQFQTEVEMIG 354 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------------------------~~~~~~~E~~~l~ 354 (626)
.++|.+.+.||+|+||.||+|.. .+++.||||++...... ....+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 35788899999999999999985 45889999998754321 1245889999999
Q ss_pred hccCCcccceeeeeec--CCceEEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCC
Q 006907 355 LALHRNLLRLYGFCMT--PEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDV 432 (626)
Q Consensus 355 ~l~h~nIv~l~~~~~~--~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dl 432 (626)
.++||||+++++++.+ ....++||||+++++|.+++. ...+++..+..++.|++.||+|||++ +|+||||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dl 163 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT-----LKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDI 163 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC-----SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCC
Confidence 9999999999999986 567899999999999987653 23599999999999999999999999 9999999
Q ss_pred CCCcEEeCCCCcEEEeeccCccccCCCCCceeeeecccCCccCccccccCC---CCccchhHHHHHHHHHHHhCCCcCCC
Q 006907 433 KAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQ---SSEKTDVFGFGVLLLELITGQKALDV 509 (626)
Q Consensus 433 kp~NILl~~~~~~ki~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~t~~~DvwSlGvil~elltg~~p~~~ 509 (626)
||+||+++.++.+||+|||++........ ......||+.|+|||.+.+.. ++.++||||||+++|||++|+.||..
T Consensus 164 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~ 242 (298)
T 2zv2_A 164 KPSNLLVGEDGHIKIADFGVSNEFKGSDA-LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMD 242 (298)
T ss_dssp CGGGEEECTTSCEEECCCTTCEECSSSSC-EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CHHHEEECCCCCEEEecCCCccccccccc-cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence 99999999999999999999987654332 233456999999999997765 37889999999999999999999975
Q ss_pred CCcccccccHHHHHHHhhhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 510 GNGQVQKGMILDCVRTLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 510 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
.... ......... ... .......+..+.+++.+||+.||++|||+.|+++.
T Consensus 243 ~~~~-------~~~~~~~~~-~~~--------~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~h 293 (298)
T 2zv2_A 243 ERIM-------CLHSKIKSQ-ALE--------FPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLH 293 (298)
T ss_dssp SSHH-------HHHHHHHHC-CCC--------CCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred ccHH-------HHHHHHhcc-cCC--------CCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence 4311 111111111 000 00112234678999999999999999999999763
No 94
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=3e-41 Score=351.19 Aligned_cols=265 Identities=27% Similarity=0.419 Sum_probs=213.6
Q ss_pred HhCCCCcCceeccCCCceEEEEEeC--------CccEEEEEEecCCCc-ccHHHHHHHHHHHHhc-cCCcccceeeeeec
Q 006907 301 ATGNFSPKNILGQGGYGVVYKGCLP--------NRMVVAVKRLKDPNF-TGEVQFQTEVEMIGLA-LHRNLLRLYGFCMT 370 (626)
Q Consensus 301 ~~~~f~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~ 370 (626)
..++|.+.+.||+|+||.||+|... ++..||+|+++.... .....+.+|+++++++ +||||+++++++.+
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 4567889999999999999999863 467899999976543 2345688999999999 89999999999999
Q ss_pred CCceEEEEeecCCCChHHHHhhccCC------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEE
Q 006907 371 PEERLLVYPYMPNGSVADCLRDTRQA------------KPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANIL 438 (626)
Q Consensus 371 ~~~~~lv~E~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NIL 438 (626)
.+..++||||+++|+|.+++...... ...+++..+..++.|++.||.|||+. +|+||||||+||+
T Consensus 113 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIl 189 (334)
T 2pvf_A 113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVL 189 (334)
T ss_dssp SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceEE
Confidence 99999999999999999999864321 23489999999999999999999999 9999999999999
Q ss_pred eCCCCcEEEeeccCccccCCCCCce-eeeecccCCccCccccccCCCCccchhHHHHHHHHHHHh-CCCcCCCCCccccc
Q 006907 439 LDESFEAVVGDFGLAKLLDRRDSHV-TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNGQVQK 516 (626)
Q Consensus 439 l~~~~~~ki~DfG~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~ 516 (626)
++.++.+||+|||++.......... .....+|+.|+|||++.+..++.++||||||+++|||++ |+.||.......
T Consensus 190 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-- 267 (334)
T 2pvf_A 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE-- 267 (334)
T ss_dssp ECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--
T ss_pred EcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHH--
Confidence 9999999999999998765433221 223346889999999998889999999999999999999 999997543211
Q ss_pred ccHHHHHHHhhhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccchh
Q 006907 517 GMILDCVRTLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEPVT 585 (626)
Q Consensus 517 ~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~~~ 585 (626)
+. ....... ....+...+..+.+++.+||+.||++|||+.|+++.|+.++....
T Consensus 268 --~~---~~~~~~~----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~ 321 (334)
T 2pvf_A 268 --LF---KLLKEGH----------RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 321 (334)
T ss_dssp --HH---HHHHHTC----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred --HH---HHHhcCC----------CCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccc
Confidence 11 1111111 111223345778999999999999999999999999999876533
No 95
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=1.5e-41 Score=350.52 Aligned_cols=266 Identities=26% Similarity=0.345 Sum_probs=209.3
Q ss_pred hCCCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCCcccHHHHHHHHHHHHhccCCcccceeeeee----cCCceEE
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCM----TPEERLL 376 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~----~~~~~~l 376 (626)
.++|.+.+.||+|+||.||++.. .+++.||+|++..........+.+|+++++.++||||+++++++. .....++
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 107 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence 45688899999999999999986 568899999987655555667899999999999999999999987 3347789
Q ss_pred EEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCcccc
Q 006907 377 VYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL 456 (626)
Q Consensus 377 v~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~ 456 (626)
||||+++|+|.+++.........+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~ 184 (317)
T 2buj_A 108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184 (317)
T ss_dssp EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence 9999999999999987655566799999999999999999999999 9999999999999999999999999998754
Q ss_pred CCCCCc--------eeeeecccCCccCccccccCC---CCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHH
Q 006907 457 DRRDSH--------VTTAVRGTVGHIAPEYLSTGQ---SSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525 (626)
Q Consensus 457 ~~~~~~--------~~~~~~gt~~y~aPE~~~~~~---~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~ 525 (626)
...... ......||+.|+|||.+.+.. ++.++||||||+++|||++|+.||....... ..+......
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~--~~~~~~~~~ 262 (317)
T 2buj_A 185 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKG--DSVALAVQN 262 (317)
T ss_dssp CEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTT--SCHHHHHHC
T ss_pred ccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhccc--chhhHHhhc
Confidence 321110 011234799999999997554 6899999999999999999999996321110 011111100
Q ss_pred hhhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccchh
Q 006907 526 LHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEPVT 585 (626)
Q Consensus 526 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~~~ 585 (626)
..........+..+.+++.+||+.||++|||+.|+++.|+.+..+.+
T Consensus 263 -------------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~ 309 (317)
T 2buj_A 263 -------------QLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAP 309 (317)
T ss_dssp -------------C--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCC
T ss_pred -------------cCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCC
Confidence 01111122345779999999999999999999999999998876543
No 96
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=2.3e-41 Score=348.56 Aligned_cols=270 Identities=26% Similarity=0.405 Sum_probs=204.5
Q ss_pred HHHHHHhCCCCcCceeccCCCceEEEEEeC----CccEEEEEEecCCCcc--cHHHHHHHHHHHHhccCCcccceeeeee
Q 006907 296 RELQIATGNFSPKNILGQGGYGVVYKGCLP----NRMVVAVKRLKDPNFT--GEVQFQTEVEMIGLALHRNLLRLYGFCM 369 (626)
Q Consensus 296 ~~~~~~~~~f~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~ 369 (626)
.++.+..++|.+.+.||+|+||.||+|... .+..||+|+++..... ....+.+|++++++++||||+++++++.
T Consensus 27 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 106 (313)
T 3brb_A 27 EDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCI 106 (313)
T ss_dssp TTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEE
T ss_pred HhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEe
Confidence 344456678889999999999999999753 3458999998755322 2356889999999999999999999998
Q ss_pred cCCc-----eEEEEeecCCCChHHHHhhcc--CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCC
Q 006907 370 TPEE-----RLLVYPYMPNGSVADCLRDTR--QAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDES 442 (626)
Q Consensus 370 ~~~~-----~~lv~E~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~ 442 (626)
+... .++||||+++|+|.+++.... .....+++..+..++.|++.||.|||++ +|+||||||+||+++.+
T Consensus 107 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~ 183 (313)
T 3brb_A 107 EMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDD 183 (313)
T ss_dssp C-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTT
T ss_pred eccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCC
Confidence 7653 499999999999999995432 2345699999999999999999999999 99999999999999999
Q ss_pred CcEEEeeccCccccCCCCCc-eeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHh-CCCcCCCCCcccccccHH
Q 006907 443 FEAVVGDFGLAKLLDRRDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNGQVQKGMIL 520 (626)
Q Consensus 443 ~~~ki~DfG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~i~ 520 (626)
+.+||+|||++......... ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||....... +.
T Consensus 184 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~----~~ 259 (313)
T 3brb_A 184 MTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE----MY 259 (313)
T ss_dssp SCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG----HH
T ss_pred CcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHH----HH
Confidence 99999999999866443221 2223447889999999999999999999999999999999 888987544321 11
Q ss_pred HHHHHhhhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccchh
Q 006907 521 DCVRTLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEPVT 585 (626)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~~~ 585 (626)
... .... ....+...+..+.+++.+||+.||++|||+.++++.|+.++..++
T Consensus 260 ~~~---~~~~----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~lp 311 (313)
T 3brb_A 260 DYL---LHGH----------RLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLP 311 (313)
T ss_dssp HHH---HTTC----------CCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred HHH---HcCC----------CCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence 111 1111 111223345789999999999999999999999999999876543
No 97
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=2.9e-42 Score=381.10 Aligned_cols=263 Identities=28% Similarity=0.425 Sum_probs=215.6
Q ss_pred HHHHhCCCCcCceeccCCCceEEEEEeCCccEEEEEEecCCCcccHHHHHHHHHHHHhccCCcccceeeeeecCCceEEE
Q 006907 298 LQIATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLV 377 (626)
Q Consensus 298 ~~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv 377 (626)
+++..++|.+.+.||+|+||.||+|.+.++..||||+++... ....+|.+|++++++++||||+++++++.+ +..++|
T Consensus 262 ~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv 339 (535)
T 2h8h_A 262 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 339 (535)
T ss_dssp SBCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEE
T ss_pred eecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEe
Confidence 445566788899999999999999999888889999998654 345679999999999999999999999876 678999
Q ss_pred EeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccC
Q 006907 378 YPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLD 457 (626)
Q Consensus 378 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~ 457 (626)
|||+++|+|.+++.... ...+++..+..++.|++.||+|||++ +|+||||||+|||+++++.+||+|||+++...
T Consensus 340 ~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 414 (535)
T 2h8h_A 340 TEYMSKGSLLDFLKGET--GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIE 414 (535)
T ss_dssp ECCCTTEEHHHHHSHHH--HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCC
T ss_pred eehhcCCcHHHHHhhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecC
Confidence 99999999999997532 23489999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHh-CCCcCCCCCcccccccHHHHHHHhhhcccccccc
Q 006907 458 RRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNGQVQKGMILDCVRTLHEERRLDVLI 536 (626)
Q Consensus 458 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 536 (626)
...........++..|+|||++.+..++.++|||||||++|||++ |+.||....... + .......
T Consensus 415 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~----~---~~~i~~~------- 480 (535)
T 2h8h_A 415 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE----V---LDQVERG------- 480 (535)
T ss_dssp CHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHH----H---HHHHHTT-------
T ss_pred CCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH----H---HHHHHcC-------
Confidence 321111223346789999999999999999999999999999999 999997543211 1 1111111
Q ss_pred ccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccch
Q 006907 537 DRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEPV 584 (626)
Q Consensus 537 ~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~~ 584 (626)
.....+..++..+.+++.+||+.||++|||+++|++.|+.+....
T Consensus 481 ---~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~ 525 (535)
T 2h8h_A 481 ---YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 525 (535)
T ss_dssp ---CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCC
T ss_pred ---CCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhcc
Confidence 111223345578999999999999999999999999999987653
No 98
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=7.6e-42 Score=347.84 Aligned_cols=255 Identities=21% Similarity=0.362 Sum_probs=204.0
Q ss_pred hCCCCcCceeccCCCceEEEEEeCC-c-------cEEEEEEecCCCcccHHHHHHHHHHHHhccCCcccceeeeeecCCc
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCLPN-R-------MVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEE 373 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 373 (626)
.++|.+.+.||+|+||.||+|.... + ..||+|++..........+.+|+++++.++||||+++++++.+++.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE 86 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence 3467888999999999999997543 2 5799999976655566789999999999999999999999999999
Q ss_pred eEEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCc--------E
Q 006907 374 RLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFE--------A 445 (626)
Q Consensus 374 ~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~--------~ 445 (626)
.++||||+++|+|.+++.... ..+++..+..++.|++.||.|||++ +|+||||||+||+++.++. +
T Consensus 87 ~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~ 160 (289)
T 4fvq_A 87 NILVQEFVKFGSLDTYLKKNK---NCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFI 160 (289)
T ss_dssp CEEEEECCTTCBHHHHHHHTG---GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCEE
T ss_pred CEEEEECCCCCCHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCccccccccee
Confidence 999999999999999997632 2489999999999999999999999 9999999999999998887 9
Q ss_pred EEeeccCccccCCCCCceeeeecccCCccCcccccc-CCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHH
Q 006907 446 VVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVR 524 (626)
Q Consensus 446 ki~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~ 524 (626)
||+|||++...... ....||+.|+|||.+.+ ..++.++||||||+++|||++|..|+........ .. .
T Consensus 161 kl~Dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~---~~---~ 229 (289)
T 4fvq_A 161 KLSDPGISITVLPK-----DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQR---KL---Q 229 (289)
T ss_dssp EECCCCSCTTTSCH-----HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH---HH---H
T ss_pred eeccCcccccccCc-----cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHH---HH---H
Confidence 99999998754321 23348899999999987 6789999999999999999996655543221111 11 1
Q ss_pred HhhhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccchh
Q 006907 525 TLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEPVT 585 (626)
Q Consensus 525 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~~~ 585 (626)
....... .+...+.++.+++.+||+.||++|||+.|+++.|+.++.|.-
T Consensus 230 ~~~~~~~------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~ 278 (289)
T 4fvq_A 230 FYEDRHQ------------LPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDL 278 (289)
T ss_dssp HHHTTCC------------CCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC----
T ss_pred HhhccCC------------CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCC
Confidence 1111111 111113458899999999999999999999999999988733
No 99
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=4e-41 Score=356.53 Aligned_cols=253 Identities=19% Similarity=0.278 Sum_probs=208.1
Q ss_pred hCCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCCcccHHHHHHHHHHHHhccCCcccceeeeeecCCceEEEEee
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPY 380 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E~ 380 (626)
.+.|.+.+.||+|+||.||+|... +++.||+|++..........+.+|+++++.++||||+++++++.+....++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 357889999999999999999864 5889999999876555566789999999999999999999999999999999999
Q ss_pred cCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeC--CCCcEEEeeccCccccCC
Q 006907 381 MPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLD--ESFEAVVGDFGLAKLLDR 458 (626)
Q Consensus 381 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~--~~~~~ki~DfG~a~~~~~ 458 (626)
+++|+|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+|||++ .++.+||+|||++.....
T Consensus 130 ~~gg~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~ 203 (387)
T 1kob_A 130 LSGGELFDRIAAE---DYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP 203 (387)
T ss_dssp CCCCBHHHHTTCT---TCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCT
T ss_pred CCCCcHHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceecCC
Confidence 9999999998642 33589999999999999999999999 999999999999997 457899999999987654
Q ss_pred CCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhcccccccccc
Q 006907 459 RDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDR 538 (626)
Q Consensus 459 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 538 (626)
.. ......||+.|+|||++.+..++.++|||||||++|||++|+.||...+... .......... ..+.
T Consensus 204 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~-------~~~~i~~~~~---~~~~ 271 (387)
T 1kob_A 204 DE--IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLE-------TLQNVKRCDW---EFDE 271 (387)
T ss_dssp TS--CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH-------HHHHHHHCCC---CCCS
T ss_pred Cc--ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHH-------HHHHHHhCCC---CCCc
Confidence 32 2334469999999999999999999999999999999999999997543211 1111111100 0011
Q ss_pred ccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 539 DLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 539 ~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
......+.++.+++.+||+.||++|||+.|+++.
T Consensus 272 ----~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 272 ----DAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp ----STTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred ----cccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 1112345778999999999999999999999984
No 100
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1.1e-41 Score=351.89 Aligned_cols=272 Identities=26% Similarity=0.386 Sum_probs=211.0
Q ss_pred CCcCceeccCCCceEEEEEeC-----CccEEEEEEecCCCc-ccHHHHHHHHHHHHhccCCcccceeeeeecC--CceEE
Q 006907 305 FSPKNILGQGGYGVVYKGCLP-----NRMVVAVKRLKDPNF-TGEVQFQTEVEMIGLALHRNLLRLYGFCMTP--EERLL 376 (626)
Q Consensus 305 f~~~~~lG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~l 376 (626)
|.+.+.||+|+||.||++++. +++.||||+++.... .....+.+|+++++.++||||+++++++.+. ...++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 478899999999999998753 578899999986543 2345689999999999999999999999874 56789
Q ss_pred EEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCcccc
Q 006907 377 VYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL 456 (626)
Q Consensus 377 v~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~ 456 (626)
||||+++|+|.+++... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 113 v~e~~~~~~L~~~l~~~-----~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~ 184 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRH-----SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAV 184 (318)
T ss_dssp EECCCTTCBHHHHGGGS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEecccCCcHHHHHhhC-----CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCccccccc
Confidence 99999999999999753 389999999999999999999999 9999999999999999999999999999877
Q ss_pred CCCCCc--eeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhcccccc
Q 006907 457 DRRDSH--VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDV 534 (626)
Q Consensus 457 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 534 (626)
...... ......+|..|+|||.+.+..++.++||||||+++|||++|+.||........ ....+............
T Consensus 185 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~ 262 (318)
T 3lxp_A 185 PEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFL--ELIGIAQGQMTVLRLTE 262 (318)
T ss_dssp CTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHH--HHHCSCCHHHHHHHHHH
T ss_pred cccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhh--hhhcccccchhHHHHHH
Confidence 654332 12334478889999999998999999999999999999999999974321100 00000000000000111
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccchhh
Q 006907 535 LIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEPVTE 586 (626)
Q Consensus 535 ~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~~~~ 586 (626)
..........+...+..+.+++.+||+.||++|||+.|+++.|+.+...+..
T Consensus 263 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~ 314 (318)
T 3lxp_A 263 LLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQG 314 (318)
T ss_dssp HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC
T ss_pred HHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhcc
Confidence 1112222233444567899999999999999999999999999988776543
No 101
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1.5e-41 Score=346.28 Aligned_cols=265 Identities=26% Similarity=0.334 Sum_probs=212.0
Q ss_pred HhCCCCcCc-eeccCCCceEEEEEe---CCccEEEEEEecCCCcc--cHHHHHHHHHHHHhccCCcccceeeeeecCCce
Q 006907 301 ATGNFSPKN-ILGQGGYGVVYKGCL---PNRMVVAVKRLKDPNFT--GEVQFQTEVEMIGLALHRNLLRLYGFCMTPEER 374 (626)
Q Consensus 301 ~~~~f~~~~-~lG~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 374 (626)
..++|.+.+ .||+|+||.||+|.+ ..+..||||+++..... ....+.+|+++++.++||||+++++++ ..+..
T Consensus 14 ~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~ 92 (291)
T 1xbb_A 14 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESW 92 (291)
T ss_dssp CGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSE
T ss_pred cchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCc
Confidence 345677777 999999999999964 34688999999765422 245789999999999999999999999 56778
Q ss_pred EEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCcc
Q 006907 375 LLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAK 454 (626)
Q Consensus 375 ~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~ 454 (626)
++||||+++++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 93 ~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 165 (291)
T 1xbb_A 93 MLVMEMAELGPLNKYLQQN----RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSK 165 (291)
T ss_dssp EEEEECCTTEEHHHHHHHC----TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred EEEEEeCCCCCHHHHHHhC----cCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcce
Confidence 9999999999999999763 3489999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCcee--eeecccCCccCccccccCCCCccchhHHHHHHHHHHHh-CCCcCCCCCcccccccHHHHHHHhhhccc
Q 006907 455 LLDRRDSHVT--TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNGQVQKGMILDCVRTLHEERR 531 (626)
Q Consensus 455 ~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~ 531 (626)
.......... ....+++.|+|||.+.+..++.++||||||+++|||++ |+.||....... +... .....
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~----~~~~---~~~~~- 237 (291)
T 1xbb_A 166 ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE----VTAM---LEKGE- 237 (291)
T ss_dssp ECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH----HHHH---HHTTC-
T ss_pred eeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHH----HHHH---HHcCC-
Confidence 7655433222 22336788999999998889999999999999999999 999997544211 1111 11111
Q ss_pred cccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccchhhhhcC
Q 006907 532 LDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEPVTEEMQG 590 (626)
Q Consensus 532 ~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~~~~~~~~ 590 (626)
....+...+..+.+++.+||+.||++|||+.|+++.|+.++.+...+...
T Consensus 238 ---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~~~~ 287 (291)
T 1xbb_A 238 ---------RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVNEGHH 287 (291)
T ss_dssp ---------CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHHHHHHC
T ss_pred ---------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhhcccc
Confidence 11223344578999999999999999999999999999998887665543
No 102
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=1.6e-41 Score=349.87 Aligned_cols=272 Identities=26% Similarity=0.376 Sum_probs=217.7
Q ss_pred cchHHHHHHhCCCCcCceeccCCCceEEEEEe------CCccEEEEEEecCCCcc-cHHHHHHHHHHHHhc-cCCcccce
Q 006907 293 FSFRELQIATGNFSPKNILGQGGYGVVYKGCL------PNRMVVAVKRLKDPNFT-GEVQFQTEVEMIGLA-LHRNLLRL 364 (626)
Q Consensus 293 ~~~~~~~~~~~~f~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~nIv~l 364 (626)
+...++....++|.+.+.||+|+||.||+|.. .+++.||||+++..... ....+.+|++++.++ +||||+++
T Consensus 17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 96 (316)
T 2xir_A 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96 (316)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence 34455666778899999999999999999974 34688999999865433 345688999999999 69999999
Q ss_pred eeeeecCC-ceEEEEeecCCCChHHHHhhccCC------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecC
Q 006907 365 YGFCMTPE-ERLLVYPYMPNGSVADCLRDTRQA------------KPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRD 431 (626)
Q Consensus 365 ~~~~~~~~-~~~lv~E~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~D 431 (626)
++++...+ ..++||||+++|+|.+++...... ...+++..+..++.|++.||.|||+. +|+|||
T Consensus 97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~d 173 (316)
T 2xir_A 97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRD 173 (316)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSC
T ss_pred EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---Cccccc
Confidence 99987755 489999999999999999864321 22388999999999999999999999 999999
Q ss_pred CCCCcEEeCCCCcEEEeeccCccccCCCCCc-eeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHh-CCCcCCC
Q 006907 432 VKAANILLDESFEAVVGDFGLAKLLDRRDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDV 509 (626)
Q Consensus 432 lkp~NILl~~~~~~ki~DfG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~ellt-g~~p~~~ 509 (626)
|||+||+++.++.+||+|||++......... ......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||..
T Consensus 174 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~ 253 (316)
T 2xir_A 174 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253 (316)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred CccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcc
Confidence 9999999999999999999999876543332 2234457899999999999999999999999999999998 9999975
Q ss_pred CCcccccccHHHHHHHhhhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccc
Q 006907 510 GNGQVQKGMILDCVRTLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEP 583 (626)
Q Consensus 510 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~ 583 (626)
..... ..... ...... ...+...+..+.+++.+||+.||++|||+.|+++.|+.++..
T Consensus 254 ~~~~~---~~~~~---~~~~~~----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 311 (316)
T 2xir_A 254 VKIDE---EFCRR---LKEGTR----------MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 311 (316)
T ss_dssp CCCSH---HHHHH---HHHTCC----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cchhH---HHHHH---hccCcc----------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence 43221 11111 111111 111222346789999999999999999999999999988764
No 103
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.1e-41 Score=353.07 Aligned_cols=266 Identities=24% Similarity=0.321 Sum_probs=199.1
Q ss_pred CCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCCccc-HHHHHHHHHHHHhccCCcccceeeeeecCCceEEEEee
Q 006907 303 GNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNFTG-EVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPY 380 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E~ 380 (626)
++|.+.+.||+|+||.||+|... +++.||+|+++...... ...+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 46888999999999999999865 68899999997543221 12455799999999999999999999999999999999
Q ss_pred cCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccCCCC
Q 006907 381 MPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRD 460 (626)
Q Consensus 381 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~ 460 (626)
++ |+|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 82 ~~-~~l~~~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 154 (324)
T 3mtl_A 82 LD-KDLKQYLDDC---GNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPT 154 (324)
T ss_dssp CS-EEHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC----
T ss_pred cc-cCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCCc
Confidence 97 5999998754 23589999999999999999999999 99999999999999999999999999998654332
Q ss_pred CceeeeecccCCccCcccccc-CCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhcccccccccc-
Q 006907 461 SHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDR- 538 (626)
Q Consensus 461 ~~~~~~~~gt~~y~aPE~~~~-~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~- 538 (626)
. ......||+.|+|||++.+ ..++.++||||||+++|||++|+.||...........+...........+.......
T Consensus 155 ~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 233 (324)
T 3mtl_A 155 K-TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEE 233 (324)
T ss_dssp ---------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHH
T ss_pred c-ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchh
Confidence 2 2233458999999999976 568999999999999999999999998655433322222222221111111110000
Q ss_pred -------ccCC----CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 539 -------DLKG----SFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 539 -------~l~~----~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
.... ...+..+..+.+++.+||+.||++|||++|+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 282 (324)
T 3mtl_A 234 FKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH 282 (324)
T ss_dssp HHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 0000 0011234678899999999999999999999984
No 104
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=3.4e-41 Score=346.80 Aligned_cols=268 Identities=18% Similarity=0.327 Sum_probs=203.8
Q ss_pred CCCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCCc---ccHHHHHHHHHHHHhccCCcccceeeeeecCCceEEEE
Q 006907 303 GNFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPNF---TGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVY 378 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 378 (626)
++|.+.+.||+|+||.||+|.. .+++.||+|+++.... .....+.+|+++++.++||||+++++++.+.+..++||
T Consensus 32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 111 (310)
T 2wqm_A 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 111 (310)
T ss_dssp GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEE
Confidence 4688899999999999999985 5688999999975432 23456889999999999999999999999999999999
Q ss_pred eecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccCC
Q 006907 379 PYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDR 458 (626)
Q Consensus 379 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~ 458 (626)
||+++++|.+++.........+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~ 188 (310)
T 2wqm_A 112 ELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 188 (310)
T ss_dssp ECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC--------
T ss_pred ecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeeecC
Confidence 99999999999986544456799999999999999999999999 999999999999999999999999999986644
Q ss_pred CCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhcccccccccc
Q 006907 459 RDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDR 538 (626)
Q Consensus 459 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 538 (626)
... ......|++.|+|||.+.+..++.++||||||+++|||++|+.||...... .............. .
T Consensus 189 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-----~~~~~~~~~~~~~~-~---- 257 (310)
T 2wqm_A 189 KTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-----LYSLCKKIEQCDYP-P---- 257 (310)
T ss_dssp -----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CC-----HHHHHHHHHTTCSC-C----
T ss_pred CCc-cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchh-----HHHHHHHhhcccCC-C----
Confidence 322 223345899999999999999999999999999999999999999743321 11111211111110 0
Q ss_pred ccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccchhhhh
Q 006907 539 DLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEPVTEEM 588 (626)
Q Consensus 539 ~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~~~~~~ 588 (626)
......+.++.+++.+||+.||++|||+.++++.|+.+....+++.
T Consensus 258 ----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~~~ 303 (310)
T 2wqm_A 258 ----LPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASSL 303 (310)
T ss_dssp ----CCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC---
T ss_pred ----CcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhhhh
Confidence 0112234678999999999999999999999999999877655443
No 105
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=4.9e-41 Score=351.44 Aligned_cols=245 Identities=21% Similarity=0.230 Sum_probs=204.8
Q ss_pred CCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCC---cccHHHHHHHHHHHHhccCCcccceeeeeecCCceEEEE
Q 006907 303 GNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPN---FTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVY 378 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 378 (626)
++|.+.+.||+|+||.||++... +++.||+|+++... ......+.+|+++++.++||||+++++++.+....++||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 46888999999999999999864 58899999986432 123456888999999999999999999999999999999
Q ss_pred eecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccCC
Q 006907 379 PYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDR 458 (626)
Q Consensus 379 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~ 458 (626)
||+++|+|.+++.... .+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||++.....
T Consensus 121 e~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~ 193 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193 (350)
T ss_dssp ECCTTCBHHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred cCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccC
Confidence 9999999999997642 489999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhcccccccccc
Q 006907 459 RDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDR 538 (626)
Q Consensus 459 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 538 (626)
. .....||+.|+|||++.+..++.++|||||||++|||++|+.||...+... ........ .
T Consensus 194 ~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-------~~~~i~~~-~------- 254 (350)
T 1rdq_E 194 R----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ-------IYEKIVSG-K------- 254 (350)
T ss_dssp C----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-------HHHHHHHC-C-------
T ss_pred C----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHH-------HHHHHHcC-C-------
Confidence 2 223468999999999999999999999999999999999999997543211 11111111 0
Q ss_pred ccCCCCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 006907 539 DLKGSFDPTELEKMVQLALQCTQSHPNLRPK-----MSEVLKV 576 (626)
Q Consensus 539 ~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs-----~~evl~~ 576 (626)
..++...+..+.+++.+||+.||++||+ ++|+++.
T Consensus 255 ---~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 255 ---VRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp ---CCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred ---CCCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence 1122334577899999999999999998 8888773
No 106
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=3.4e-41 Score=355.10 Aligned_cols=269 Identities=15% Similarity=0.184 Sum_probs=204.8
Q ss_pred HhCCCCcCceeccCCCceEEEEEeCC------ccEEEEEEecCCCcccH-----------HHHHHHHHHHHhccCCcccc
Q 006907 301 ATGNFSPKNILGQGGYGVVYKGCLPN------RMVVAVKRLKDPNFTGE-----------VQFQTEVEMIGLALHRNLLR 363 (626)
Q Consensus 301 ~~~~f~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~-----------~~~~~E~~~l~~l~h~nIv~ 363 (626)
..++|.+.+.||+|+||.||+|.+.. ++.||||++........ ..+..|+..++.++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 34578899999999999999998754 36799999876542111 12334555667778999999
Q ss_pred eeeeeecC----CceEEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe
Q 006907 364 LYGFCMTP----EERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILL 439 (626)
Q Consensus 364 l~~~~~~~----~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl 439 (626)
+++++... ...++||||+ +++|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+|||+
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~---~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill 185 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN---AKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLL 185 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEE
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEE
Confidence 99998765 3479999999 99999999763 24599999999999999999999999 99999999999999
Q ss_pred C--CCCcEEEeeccCccccCCCCCce------eeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCC
Q 006907 440 D--ESFEAVVGDFGLAKLLDRRDSHV------TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGN 511 (626)
Q Consensus 440 ~--~~~~~ki~DfG~a~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~ 511 (626)
+ .++.+||+|||+++.+....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 186 ~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~ 265 (364)
T 3op5_A 186 NYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNL 265 (364)
T ss_dssp ESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGT
T ss_pred ecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccc
Confidence 9 88999999999998764332211 123449999999999999999999999999999999999999998532
Q ss_pred cccccccHHHHHHHhhhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccc
Q 006907 512 GQVQKGMILDCVRTLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEP 583 (626)
Q Consensus 512 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~ 583 (626)
.... ......... ...+..+.++.+. ....+.++.+++..||+.+|++||++.+|++.|+.++..
T Consensus 266 ~~~~---~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~ 330 (364)
T 3op5_A 266 KDPK---YVRDSKIRY-RENIASLMDKCFP---AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKA 330 (364)
T ss_dssp TCHH---HHHHHHHHH-HHCHHHHHHHHSC---TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred cCHH---HHHHHHHHh-hhhHHHHHHHhcc---cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Confidence 2211 111111111 0111122222211 012246789999999999999999999999999988764
No 107
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=4.1e-41 Score=353.79 Aligned_cols=278 Identities=21% Similarity=0.270 Sum_probs=214.3
Q ss_pred CcccccchHHHHHHhCCCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCCcccHHHHHHHHHHHHhcc-----CCcc
Q 006907 288 GHLKRFSFRELQIATGNFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLAL-----HRNL 361 (626)
Q Consensus 288 ~~~~~~~~~~~~~~~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h~nI 361 (626)
.....+++++.....++|.+.++||+|+||.||+|.. .+++.||||+++... .....+..|+++++.+. ||||
T Consensus 20 ~~~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~h~~i 98 (360)
T 3llt_A 20 DEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK-KYTRSAKIEADILKKIQNDDINNNNI 98 (360)
T ss_dssp CGGGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH-HHHHHHHHHHHHHHHTCCCSTTGGGB
T ss_pred ccceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccch-hhhhhhHHHHHHHHHhcccCCCCCCe
Confidence 3456677777788889999999999999999999986 468899999997432 33446778999999886 9999
Q ss_pred cceeeeeecCCceEEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC
Q 006907 362 LRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDE 441 (626)
Q Consensus 362 v~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~ 441 (626)
+++++++...+..++||||+ +++|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.
T Consensus 99 v~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~ 172 (360)
T 3llt_A 99 VKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNN--YNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDD 172 (360)
T ss_dssp CCEEEEEEETTEEEEEECCC-CCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESC
T ss_pred ecccceeeECCeeEEEEcCC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEcc
Confidence 99999999999999999999 899999998643 33589999999999999999999999 9999999999999975
Q ss_pred -------------------------CCcEEEeeccCccccCCCCCceeeeecccCCccCccccccCCCCccchhHHHHHH
Q 006907 442 -------------------------SFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVL 496 (626)
Q Consensus 442 -------------------------~~~~ki~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvi 496 (626)
++.+||+|||++....... ....||+.|+|||++.+..++.++|||||||+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i 248 (360)
T 3llt_A 173 PYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH----GSIINTRQYRAPEVILNLGWDVSSDMWSFGCV 248 (360)
T ss_dssp TTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCC----CSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHH
T ss_pred ccccccccchhcccccccccccccCCCCEEEEeccCceecCCCC----cCccCcccccCcHHHcCCCCCCccchHHHHHH
Confidence 7899999999998654322 23458999999999999999999999999999
Q ss_pred HHHHHhCCCcCCCCCcccccccHHHHHH--------HhhhccccccccccccCCCCC--------------------HHH
Q 006907 497 LLELITGQKALDVGNGQVQKGMILDCVR--------TLHEERRLDVLIDRDLKGSFD--------------------PTE 548 (626)
Q Consensus 497 l~elltg~~p~~~~~~~~~~~~i~~~~~--------~~~~~~~~~~~~~~~l~~~~~--------------------~~~ 548 (626)
+|||++|+.||...........+..... ...................++ ...
T Consensus 249 l~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 328 (360)
T 3llt_A 249 LAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIK 328 (360)
T ss_dssp HHHHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCC
T ss_pred HHHHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccch
Confidence 9999999999986543322211111100 000000000000000000000 001
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 549 LEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 549 ~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
.+.+.+++.+||+.||++|||++|+++.
T Consensus 329 ~~~l~~li~~~L~~dP~~Rpta~elL~h 356 (360)
T 3llt_A 329 HELFCDFLYSILQIDPTLRPSPAELLKH 356 (360)
T ss_dssp CHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred HHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 2678899999999999999999999863
No 108
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.3e-41 Score=340.99 Aligned_cols=262 Identities=24% Similarity=0.372 Sum_probs=211.9
Q ss_pred CCCCcCc-eeccCCCceEEEEEeC---CccEEEEEEecCCCc-ccHHHHHHHHHHHHhccCCcccceeeeeecCCceEEE
Q 006907 303 GNFSPKN-ILGQGGYGVVYKGCLP---NRMVVAVKRLKDPNF-TGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLV 377 (626)
Q Consensus 303 ~~f~~~~-~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv 377 (626)
++|.+.+ .||+|+||.||+|.+. ++..||+|+++.... .....+.+|+++++.++||||+++++++ ..+..++|
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv 87 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV 87 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence 3455555 8999999999999753 577899999986532 3345689999999999999999999999 45678999
Q ss_pred EeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccC
Q 006907 378 YPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLD 457 (626)
Q Consensus 378 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~ 457 (626)
|||+++++|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 88 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~ 161 (287)
T 1u59_A 88 MEMAGGGPLHKFLVGK---REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALG 161 (287)
T ss_dssp EECCTTEEHHHHHTTC---TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECT
T ss_pred EEeCCCCCHHHHHHhC---CccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeeec
Confidence 9999999999999642 34589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCcee--eeecccCCccCccccccCCCCccchhHHHHHHHHHHHh-CCCcCCCCCcccccccHHHHHHHhhhcccccc
Q 006907 458 RRDSHVT--TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNGQVQKGMILDCVRTLHEERRLDV 534 (626)
Q Consensus 458 ~~~~~~~--~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 534 (626)
....... ....+|+.|+|||.+.+..++.++||||||+++|||++ |+.||....... +... .....
T Consensus 162 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~----~~~~---i~~~~---- 230 (287)
T 1u59_A 162 ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE----VMAF---IEQGK---- 230 (287)
T ss_dssp TCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH----HHHH---HHTTC----
T ss_pred cCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH----HHHH---HhcCC----
Confidence 4333221 22336889999999998889999999999999999998 999997544221 1111 11111
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccchhhhh
Q 006907 535 LIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEPVTEEM 588 (626)
Q Consensus 535 ~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~~~~~~ 588 (626)
....+...+..+.+++.+||+.||++||++.|+++.|+.++.......
T Consensus 231 ------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~~ 278 (287)
T 1u59_A 231 ------RMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKV 278 (287)
T ss_dssp ------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTTC
T ss_pred ------cCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCcc
Confidence 112333456789999999999999999999999999999877655443
No 109
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=1.2e-40 Score=347.82 Aligned_cols=255 Identities=24% Similarity=0.278 Sum_probs=202.5
Q ss_pred CCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCCcc---cHHHHHHHHHHHHhc-cCCcccceeeeeecCCceEEE
Q 006907 303 GNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNFT---GEVQFQTEVEMIGLA-LHRNLLRLYGFCMTPEERLLV 377 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv 377 (626)
++|.+.+.||+|+||.||++... +++.||+|+++..... ....+..|..++.++ +||||+++++++.+....++|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 46888999999999999999864 5889999999754322 234578899999887 899999999999999999999
Q ss_pred EeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccC
Q 006907 378 YPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLD 457 (626)
Q Consensus 378 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~ 457 (626)
|||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++++||+|||+++...
T Consensus 89 ~e~~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~ 161 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQR----KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 161 (345)
T ss_dssp ECCCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSC
T ss_pred EeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEecccccccc
Confidence 99999999999997642 489999999999999999999999 99999999999999999999999999998643
Q ss_pred CCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccc-cHHHHHHHhhhcccccccc
Q 006907 458 RRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKG-MILDCVRTLHEERRLDVLI 536 (626)
Q Consensus 458 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~ 536 (626)
... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.......... ..............
T Consensus 162 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~----- 235 (345)
T 3a8x_A 162 RPG-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ----- 235 (345)
T ss_dssp CTT-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCC-----
T ss_pred CCC-CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCC-----
Confidence 222 22344569999999999999999999999999999999999999997532211100 00111111111111
Q ss_pred ccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCH------HHHHH
Q 006907 537 DRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKM------SEVLK 575 (626)
Q Consensus 537 ~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~------~evl~ 575 (626)
..++...+..+.+++.+||+.||++||++ .|+++
T Consensus 236 -----~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~ 275 (345)
T 3a8x_A 236 -----IRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG 275 (345)
T ss_dssp -----CCCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHT
T ss_pred -----CCCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhc
Confidence 11233445778999999999999999996 56655
No 110
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=4.3e-41 Score=352.04 Aligned_cols=251 Identities=23% Similarity=0.296 Sum_probs=204.3
Q ss_pred HHhCCCCcCceeccCCCceEEEEEeCC-ccEEEEEEecCCC---cccHHHHHHHHHHHHhc-cCCcccceeeeeecCCce
Q 006907 300 IATGNFSPKNILGQGGYGVVYKGCLPN-RMVVAVKRLKDPN---FTGEVQFQTEVEMIGLA-LHRNLLRLYGFCMTPEER 374 (626)
Q Consensus 300 ~~~~~f~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~ 374 (626)
...++|.+.++||+|+||.||+|.... ++.||+|+++... ......+..|..++..+ +||||+++++++.+.+..
T Consensus 17 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~ 96 (353)
T 2i0e_A 17 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL 96 (353)
T ss_dssp --CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEE
T ss_pred CchHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEE
Confidence 345679999999999999999998754 7889999997532 12345678899999887 799999999999999999
Q ss_pred EEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCcc
Q 006907 375 LLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAK 454 (626)
Q Consensus 375 ~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~ 454 (626)
++||||+++|+|.+++.... .+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||++.
T Consensus 97 ~lv~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~ 169 (353)
T 2i0e_A 97 YFVMEYVNGGDLMYHIQQVG----RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCK 169 (353)
T ss_dssp EEEEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred EEEEeCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCccc
Confidence 99999999999999997642 489999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhcccccc
Q 006907 455 LLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDV 534 (626)
Q Consensus 455 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 534 (626)
...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...+.... .......
T Consensus 170 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~-------~~~i~~~----- 236 (353)
T 2i0e_A 170 ENIWDG-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL-------FQSIMEH----- 236 (353)
T ss_dssp CCCCTT-CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-------HHHHHHC-----
T ss_pred ccccCC-cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHH-------HHHHHhC-----
Confidence 643222 223445699999999999999999999999999999999999999975442211 1111111
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 006907 535 LIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPK-----MSEVLKV 576 (626)
Q Consensus 535 ~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs-----~~evl~~ 576 (626)
...++...+.++.+++.+||+.||++||+ ++|+++.
T Consensus 237 ------~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 237 ------NVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp ------CCCCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred ------CCCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 01123344578999999999999999995 4677653
No 111
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=3.5e-41 Score=349.62 Aligned_cols=251 Identities=21% Similarity=0.365 Sum_probs=198.7
Q ss_pred CCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCCc-ccHHHHHHHHHHHHhccCCcccceeeeeecCCc-------
Q 006907 303 GNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNF-TGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEE------- 373 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~------- 373 (626)
++|++.+.||+|+||.||+|... +++.||||+++.... .....+.+|++++++++||||+++++++.+...
T Consensus 6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 85 (332)
T 3qd2_B 6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEM 85 (332)
T ss_dssp HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHH
T ss_pred hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhh
Confidence 46888999999999999999875 688999999975443 334678999999999999999999999865432
Q ss_pred --------------------------------------------------eEEEEeecCCCChHHHHhhccCCCCCCCHH
Q 006907 374 --------------------------------------------------RLLVYPYMPNGSVADCLRDTRQAKPPLDWN 403 (626)
Q Consensus 374 --------------------------------------------------~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~ 403 (626)
.++||||+++|+|.+++.... .....++.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~ 164 (332)
T 3qd2_B 86 DEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRC-SLEDREHG 164 (332)
T ss_dssp HC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCC-SGGGSCHH
T ss_pred hhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhccc-CccchhhH
Confidence 789999999999999998643 23446788
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccCCCCCc-----------eeeeecccCC
Q 006907 404 RRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSH-----------VTTAVRGTVG 472 (626)
Q Consensus 404 ~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~~~-----------~~~~~~gt~~ 472 (626)
.+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++......... ......||+.
T Consensus 165 ~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 241 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL 241 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred HHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence 8999999999999999999 9999999999999999999999999999877554221 1233458999
Q ss_pred ccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccccccccccccCCCCCHHHHHHH
Q 006907 473 HIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDRDLKGSFDPTELEKM 552 (626)
Q Consensus 473 y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l 552 (626)
|+|||.+.+..++.++||||||+++|||++|..|+... .......... . .........+.+
T Consensus 242 y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~---------~~~~~~~~~~-~---------~~~~~~~~~~~~ 302 (332)
T 3qd2_B 242 YMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER---------VRIITDVRNL-K---------FPLLFTQKYPQE 302 (332)
T ss_dssp GSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH---------HHHHHHHHTT-C---------CCHHHHHHCHHH
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH---------HHHHHHhhcc-C---------CCcccccCChhH
Confidence 99999999999999999999999999999987665310 0011111100 0 000113345678
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHH
Q 006907 553 VQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 553 ~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
.+++.+||+.||++|||++|+++.
T Consensus 303 ~~li~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 303 HMMVQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHHHHHHCSSGGGSCCHHHHHHS
T ss_pred HHHHHHHccCCCCcCCCHHHHhhc
Confidence 899999999999999999999874
No 112
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=3e-41 Score=354.96 Aligned_cols=253 Identities=21% Similarity=0.289 Sum_probs=205.1
Q ss_pred HhCCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCCcc--cHHHHHHHHHHHHhccCCcccceeeeeecCCceEEE
Q 006907 301 ATGNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNFT--GEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLV 377 (626)
Q Consensus 301 ~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv 377 (626)
..++|.+.+.||+|+||.||++... ++..||+|+++..... ....+.+|+++++.++||||+++++++.+.+..++|
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 106 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 106 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 3457899999999999999999864 5889999999765432 335688999999999999999999999999999999
Q ss_pred EeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCC---CcEEEeeccCcc
Q 006907 378 YPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDES---FEAVVGDFGLAK 454 (626)
Q Consensus 378 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~---~~~ki~DfG~a~ 454 (626)
|||+++|+|.+++... ..+++..+..++.|++.||.|||++ +|+||||||+|||++.+ +.+||+|||++.
T Consensus 107 ~e~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~ 179 (362)
T 2bdw_A 107 FDLVTGGELFEDIVAR----EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAI 179 (362)
T ss_dssp ECCCCSCBHHHHHTTC----SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCB
T ss_pred EecCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcce
Confidence 9999999999998642 3589999999999999999999999 99999999999999864 459999999998
Q ss_pred ccCCCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhcccccc
Q 006907 455 LLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDV 534 (626)
Q Consensus 455 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 534 (626)
...... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||...+... +...+. .. ...
T Consensus 180 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~----~~~~i~---~~-~~~- 248 (362)
T 2bdw_A 180 EVNDSE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR----LYAQIK---AG-AYD- 248 (362)
T ss_dssp CCTTCC--SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHHH---HT-CCC-
T ss_pred EecCCc--ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH----HHHHHH---hC-CCC-
Confidence 765432 2234569999999999999899999999999999999999999997543211 111111 11 000
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 535 LIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 535 ~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
.........+.++.+++.+||+.||++|||+.|+++.
T Consensus 249 -----~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 249 -----YPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp -----CCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred -----CCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0000011234678999999999999999999999874
No 113
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1.6e-40 Score=338.46 Aligned_cols=263 Identities=32% Similarity=0.489 Sum_probs=199.1
Q ss_pred HHHhCCCCcCceeccCCCceEEEEEeCCccEEEEEEecCCCcc--cHHHHHHHHHHHHhccCCcccceeeeeecCCceEE
Q 006907 299 QIATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFT--GEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLL 376 (626)
Q Consensus 299 ~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 376 (626)
++..++|.+.+.||+|+||.||+|...+ .||+|+++..... ....+.+|+++++.++||||+++++++ .....++
T Consensus 20 ei~~~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~l 96 (289)
T 3og7_A 20 EIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAI 96 (289)
T ss_dssp BCCTTSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEE
T ss_pred ccCccceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEE
Confidence 3456789999999999999999998654 4999999755432 335689999999999999999999965 5567899
Q ss_pred EEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCcccc
Q 006907 377 VYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL 456 (626)
Q Consensus 377 v~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~ 456 (626)
||||+++++|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 97 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 170 (289)
T 3og7_A 97 VTQWCEGSSLYHHLHAS---ETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEK 170 (289)
T ss_dssp EEECCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC-----
T ss_pred EEEecCCCcHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceecccc
Confidence 99999999999999643 34589999999999999999999999 9999999999999999999999999999765
Q ss_pred CCCC-CceeeeecccCCccCccccc---cCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhcccc
Q 006907 457 DRRD-SHVTTAVRGTVGHIAPEYLS---TGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRL 532 (626)
Q Consensus 457 ~~~~-~~~~~~~~gt~~y~aPE~~~---~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~ 532 (626)
.... ........||+.|+|||.+. +..++.++||||||+++|||++|+.||....... .+....... ..
T Consensus 171 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~---~~~~~~~~~----~~ 243 (289)
T 3og7_A 171 SRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD---QIIEMVGRG----SL 243 (289)
T ss_dssp -------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHH---HHHHHHHHT----SC
T ss_pred ccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHH---HHHHHhccc----cc
Confidence 4322 22223455899999999996 5678899999999999999999999997543221 111111111 10
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccc
Q 006907 533 DVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVE 582 (626)
Q Consensus 533 ~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~ 582 (626)
. +.. .......+..+.+++.+||+.+|++|||+.|+++.|+++..
T Consensus 244 ~----~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 244 S----PDL-SKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp C----CCT-TSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred C----cch-hhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 0 000 11122345789999999999999999999999999998764
No 114
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.4e-40 Score=340.54 Aligned_cols=264 Identities=19% Similarity=0.249 Sum_probs=201.3
Q ss_pred hCCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCCccc---HHHHHHHHHHHHhccCCcccceeeeeecCCceEEE
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNFTG---EVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLV 377 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv 377 (626)
-++|.+.+.||+|+||.||+|... +++.||+|++....... ...+.+|+.+++.++||||+++++++..++..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 467899999999999999999864 68899999997543322 35688999999999999999999999999999999
Q ss_pred EeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccC
Q 006907 378 YPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLD 457 (626)
Q Consensus 378 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~ 457 (626)
|||+++++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 113 ~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 185 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQ----GPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATT 185 (309)
T ss_dssp EECCCCEEHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC-----
T ss_pred EEecCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCcccc
Confidence 9999999999999764 2489999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccccccccc
Q 006907 458 RRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLID 537 (626)
Q Consensus 458 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 537 (626)
...........|++.|+|||.+.+..++.++||||||+++|||++|+.||...... .+... ........
T Consensus 186 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~~~---~~~~~~~~---- 254 (309)
T 2h34_A 186 DEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS----VMGAH---INQAIPRP---- 254 (309)
T ss_dssp -----------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH----HHHHH---HHSCCCCG----
T ss_pred ccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH----HHHHH---hccCCCCc----
Confidence 44333334456899999999999989999999999999999999999999753321 11111 11100000
Q ss_pred cccCCCCCHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHHhhcccchhhh
Q 006907 538 RDLKGSFDPTELEKMVQLALQCTQSHPNLRP-KMSEVLKVLEVLVEPVTEE 587 (626)
Q Consensus 538 ~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RP-s~~evl~~L~~l~~~~~~~ 587 (626)
. ..+...+..+.+++.+||+.||++|| +++++++.|+.++.....+
T Consensus 255 ~----~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~~~ 301 (309)
T 2h34_A 255 S----TVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATADQD 301 (309)
T ss_dssp G----GTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC-----
T ss_pred c----ccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhccc
Confidence 0 11223346789999999999999999 9999999999988765443
No 115
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1.3e-40 Score=350.12 Aligned_cols=253 Identities=21% Similarity=0.252 Sum_probs=195.1
Q ss_pred hCCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCCcccHHHHHHHHHHHHhccCCcccceeeeeecCCceEEEEee
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPY 380 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E~ 380 (626)
.++|.+.+.||+|+||.||++... +++.||+|++...... ...+.+|+.+++.++||||+++++++.+....++||||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 97 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAI-DENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY 97 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTS-CHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccc-cHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence 457889999999999999999865 6889999999764432 35688999999999999999999999999999999999
Q ss_pred cCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCc--EEEeeccCccccCC
Q 006907 381 MPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFE--AVVGDFGLAKLLDR 458 (626)
Q Consensus 381 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~--~ki~DfG~a~~~~~ 458 (626)
+++|+|.+++.... .+++..+..++.|++.||.|||++ +|+||||||+||+++.++. +||+|||+++....
T Consensus 98 ~~~~~L~~~l~~~~----~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~ 170 (361)
T 3uc3_A 98 ASGGELYERICNAG----RFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL 170 (361)
T ss_dssp CCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC-----
T ss_pred CCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCccccccc
Confidence 99999999997532 489999999999999999999999 9999999999999987765 99999999974332
Q ss_pred CCCceeeeecccCCccCccccccCCCCcc-chhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccccccccc
Q 006907 459 RDSHVTTAVRGTVGHIAPEYLSTGQSSEK-TDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLID 537 (626)
Q Consensus 459 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~~-~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 537 (626)
.. ......||+.|+|||++.+..++.+ +||||||+++|||++|+.||...........+. ......
T Consensus 171 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~---~~~~~~-------- 237 (361)
T 3uc3_A 171 HS--QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTI---QRILSV-------- 237 (361)
T ss_dssp ------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHH---HHHHTT--------
T ss_pred cC--CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHH---HHHhcC--------
Confidence 21 2233459999999999988877655 899999999999999999998654332222211 111110
Q ss_pred cccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 538 RDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 538 ~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
..........+..+.+|+.+||+.||++|||+.|+++.
T Consensus 238 -~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 238 -KYSIPDDIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp -CCCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred -CCCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 00001111234678999999999999999999999984
No 116
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=7.5e-41 Score=356.50 Aligned_cols=275 Identities=17% Similarity=0.235 Sum_probs=216.0
Q ss_pred CCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCCc-ccHHHHHHHHHHHHhccCCcccceeeeeecCC--ceEEEE
Q 006907 303 GNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNF-TGEVQFQTEVEMIGLALHRNLLRLYGFCMTPE--ERLLVY 378 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~--~~~lv~ 378 (626)
++|.+.++||+|+||.||+|... +++.||||+++.... .....+.+|++++++++||||+++++++.... ..++||
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 46888999999999999999865 488999999975432 33456789999999999999999999998765 679999
Q ss_pred eecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe----CCCCcEEEeeccCcc
Q 006907 379 PYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILL----DESFEAVVGDFGLAK 454 (626)
Q Consensus 379 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl----~~~~~~ki~DfG~a~ 454 (626)
||+++|+|.+++..... ...+++..+..++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||++.
T Consensus 89 e~~~~g~L~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~ 164 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPSN-AYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (396)
T ss_dssp CCCTTEEHHHHTTSGGG-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred ecCCCCCHHHHHHhhhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence 99999999999976432 23489999999999999999999999 99999999999999 788889999999998
Q ss_pred ccCCCCCceeeeecccCCccCcccccc--------CCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHh
Q 006907 455 LLDRRDSHVTTAVRGTVGHIAPEYLST--------GQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTL 526 (626)
Q Consensus 455 ~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~ 526 (626)
...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...........+.......
T Consensus 165 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~ 242 (396)
T 4eut_A 165 ELEDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG 242 (396)
T ss_dssp ECCCGG--GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHS
T ss_pred EccCCC--ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcC
Confidence 765432 2233458999999999865 467889999999999999999999997544333222222211111
Q ss_pred hhccccccc---------cc--cccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccc
Q 006907 527 HEERRLDVL---------ID--RDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEP 583 (626)
Q Consensus 527 ~~~~~~~~~---------~~--~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~ 583 (626)
.+....... .. .......+......+.+++.+||+.||++||+++|+++.+++++..
T Consensus 243 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred CCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 111111100 00 1112234578889999999999999999999999999999987664
No 117
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=2.6e-41 Score=356.80 Aligned_cols=247 Identities=23% Similarity=0.294 Sum_probs=198.4
Q ss_pred CceeccCCCceEEEEEe-CCccEEEEEEecCCCcccHHHHHHHHHHHHhccCCcccceeeeeecCCceEEEEeecCCCCh
Q 006907 308 KNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPNGSV 386 (626)
Q Consensus 308 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E~~~~gsL 386 (626)
.++||+|+||.||+|.. .+++.||+|+++.........+.+|++++++++||||+++++++.+.+..++||||+++|+|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 56899999999999985 46889999999876655667899999999999999999999999999999999999999999
Q ss_pred HHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe--CCCCcEEEeeccCccccCCCCCcee
Q 006907 387 ADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILL--DESFEAVVGDFGLAKLLDRRDSHVT 464 (626)
Q Consensus 387 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl--~~~~~~ki~DfG~a~~~~~~~~~~~ 464 (626)
.+++... ...+++..+..++.|++.||.|||+. +|+||||||+|||+ ++++.+||+|||++........ .
T Consensus 174 ~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~--~ 245 (373)
T 2x4f_A 174 FDRIIDE---SYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK--L 245 (373)
T ss_dssp HHHHHHT---GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB--C
T ss_pred HHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc--c
Confidence 9998653 23489999999999999999999999 99999999999999 6778999999999987654332 2
Q ss_pred eeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccccccccccccCCCC
Q 006907 465 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDRDLKGSF 544 (626)
Q Consensus 465 ~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~ 544 (626)
....||+.|+|||++.+..++.++|||||||++|||++|+.||......... ......... .....
T Consensus 246 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~-------~~i~~~~~~---~~~~~---- 311 (373)
T 2x4f_A 246 KVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETL-------NNILACRWD---LEDEE---- 311 (373)
T ss_dssp CCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH-------HHHHHTCCC---SCSGG----
T ss_pred ccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHH-------HHHHhccCC---CChhh----
Confidence 2345999999999999889999999999999999999999999765432211 111111100 00000
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 545 DPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 545 ~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
....+.++.+++.+||+.||++|||+.|+++.
T Consensus 312 ~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~h 343 (373)
T 2x4f_A 312 FQDISEEAKEFISKLLIKEKSWRISASEALKH 343 (373)
T ss_dssp GTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred hccCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 11234678999999999999999999999983
No 118
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=6.6e-41 Score=344.99 Aligned_cols=258 Identities=22% Similarity=0.316 Sum_probs=196.8
Q ss_pred hCCCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCCccc---HHHHHHHHHHHHhccCCcccceeeeeecCCce---
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPNFTG---EVQFQTEVEMIGLALHRNLLRLYGFCMTPEER--- 374 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~--- 374 (626)
.++|.+.+.||+|+||.||+|.. .+++.||||+++...... ...+.+|++++++++||||+++++++......
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 35788899999999999999985 568899999998654333 24688999999999999999999998766544
Q ss_pred -EEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCc
Q 006907 375 -LLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLA 453 (626)
Q Consensus 375 -~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a 453 (626)
++||||+++++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a 163 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEG----PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIA 163 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC
T ss_pred cEEEEecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCc
Confidence 99999999999999997532 489999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCc--eeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccc
Q 006907 454 KLLDRRDSH--VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERR 531 (626)
Q Consensus 454 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~ 531 (626)
......... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||....... ..........
T Consensus 164 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~-------~~~~~~~~~~ 236 (311)
T 3ork_A 164 RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS-------VAYQHVREDP 236 (311)
T ss_dssp ------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH-------HHHHHHHCCC
T ss_pred ccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH-------HHHHHhcCCC
Confidence 876543222 2233458999999999999999999999999999999999999997543211 1111111110
Q ss_pred cccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH-HHhhc
Q 006907 532 LDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLK-VLEVL 580 (626)
Q Consensus 532 ~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~-~L~~l 580 (626)
.. .... ....+.++.+++.+||+.||++||++.++++ .+...
T Consensus 237 ~~---~~~~----~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 279 (311)
T 3ork_A 237 IP---PSAR----HEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279 (311)
T ss_dssp CC---HHHH----STTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred CC---cccc----cCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence 00 0000 0123467899999999999999997776665 44443
No 119
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=8.1e-41 Score=346.87 Aligned_cols=259 Identities=24% Similarity=0.406 Sum_probs=203.3
Q ss_pred hCCCCcCceeccCCCceEEEEEeC-Ccc----EEEEEEecCCC-cccHHHHHHHHHHHHhccCCcccceeeeeecCCceE
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCLP-NRM----VVAVKRLKDPN-FTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERL 375 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 375 (626)
.++|.+.++||+|+||.||+|.+. +++ .||+|.+.... ......+.+|+.+++.++||||+++++++..+. .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 356888999999999999999853 333 46888876443 344667899999999999999999999998754 78
Q ss_pred EEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccc
Q 006907 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKL 455 (626)
Q Consensus 376 lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~ 455 (626)
+|+||+++|+|.+++... ...+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||++..
T Consensus 93 ~v~~~~~~g~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~ 166 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp EEECCCSSCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC---
T ss_pred EEEEecCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeE
Confidence 999999999999999764 23589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCc-eeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHh-CCCcCCCCCcccccccHHHHHHHhhhccccc
Q 006907 456 LDRRDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNGQVQKGMILDCVRTLHEERRLD 533 (626)
Q Consensus 456 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~ 533 (626)
....... ......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||....... +..... .
T Consensus 167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~----~~~~~~---~----- 234 (327)
T 3lzb_A 167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE----ISSILE---K----- 234 (327)
T ss_dssp -------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG----HHHHHH---T-----
T ss_pred ccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH----HHHHHH---c-----
Confidence 6543222 2223346789999999999999999999999999999999 999997654322 111111 1
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccch
Q 006907 534 VLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEPV 584 (626)
Q Consensus 534 ~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~~ 584 (626)
......+...+..+.+++.+||+.||++|||+.|+++.|+.+....
T Consensus 235 -----~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 280 (327)
T 3lzb_A 235 -----GERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDP 280 (327)
T ss_dssp -----TCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTSH
T ss_pred -----CCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhCc
Confidence 1111223334567999999999999999999999999999987653
No 120
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=2.9e-40 Score=337.13 Aligned_cols=264 Identities=17% Similarity=0.194 Sum_probs=206.9
Q ss_pred HhCCCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCCcccHHHHHHHHHHHHhccCCcccceeeee-ecCCceEEEE
Q 006907 301 ATGNFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFC-MTPEERLLVY 378 (626)
Q Consensus 301 ~~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~-~~~~~~~lv~ 378 (626)
..++|.+.+.||+|+||.||+|.. .+++.||+|++..... ..++..|+++++.++|++++..++++ ...+..++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence 356899999999999999999985 5688999998765432 23578899999999988877777766 5667779999
Q ss_pred eecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe---CCCCcEEEeeccCccc
Q 006907 379 PYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILL---DESFEAVVGDFGLAKL 455 (626)
Q Consensus 379 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl---~~~~~~ki~DfG~a~~ 455 (626)
||+ +++|.+++... ...+++..+..++.|++.||.|||++ +|+||||||+||++ ++++.+||+|||++..
T Consensus 85 e~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~ 157 (296)
T 4hgt_A 85 ELL-GPSLEDLFNFC---SRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK 157 (296)
T ss_dssp ECC-CCBHHHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred Ecc-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCcccee
Confidence 999 99999999753 23589999999999999999999999 99999999999999 7889999999999987
Q ss_pred cCCCCCc------eeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhc
Q 006907 456 LDRRDSH------VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEE 529 (626)
Q Consensus 456 ~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~ 529 (626)
....... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||...........+..........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 237 (296)
T 4hgt_A 158 YRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST 237 (296)
T ss_dssp CBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHS
T ss_pred ccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccc
Confidence 6544321 1234468999999999999999999999999999999999999998655443333332222111110
Q ss_pred cccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccc
Q 006907 530 RRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEP 583 (626)
Q Consensus 530 ~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~ 583 (626)
. . +... ...+..+.+++.+||+.||++|||++++++.|+.+...
T Consensus 238 ~-~-----~~~~----~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~ 281 (296)
T 4hgt_A 238 P-I-----EVLC----KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 281 (296)
T ss_dssp C-H-----HHHT----TTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHH
T ss_pred h-h-----hhhh----ccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHH
Confidence 0 0 0000 11246799999999999999999999999999987764
No 121
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=4e-41 Score=346.67 Aligned_cols=246 Identities=24% Similarity=0.272 Sum_probs=194.3
Q ss_pred hCCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCCcc--cHHHHHHHHHHHHhc-cCCcccceeeeeecCCceEEE
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNFT--GEVQFQTEVEMIGLA-LHRNLLRLYGFCMTPEERLLV 377 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv 377 (626)
.++|++.++||+|+||+||+|... +++.||||++...... ....+..|+..+..+ +||||+++++++.+++..++|
T Consensus 56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv 135 (311)
T 3p1a_A 56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQ 135 (311)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEE
Confidence 357999999999999999999875 6899999998754332 233455566555555 899999999999999999999
Q ss_pred EeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccC
Q 006907 378 YPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLD 457 (626)
Q Consensus 378 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~ 457 (626)
|||+ +++|.+++.... ..++|..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++....
T Consensus 136 ~e~~-~~~L~~~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~ 208 (311)
T 3p1a_A 136 TELC-GPSLQQHCEAWG---ASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELG 208 (311)
T ss_dssp EECC-CCBHHHHHHHHC---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC
T ss_pred Eecc-CCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeecc
Confidence 9999 679999987642 3599999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccccccccc
Q 006907 458 RRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLID 537 (626)
Q Consensus 458 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 537 (626)
... ......||++|+|||++.+ .++.++|||||||++|||++|..|+..... + ....... . .
T Consensus 209 ~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~---------~-~~~~~~~-~----~ 270 (311)
T 3p1a_A 209 TAG--AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG---------W-QQLRQGY-L----P 270 (311)
T ss_dssp --------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH---------H-HHHTTTC-C----C
T ss_pred cCC--CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH---------H-HHHhccC-C----C
Confidence 332 2334458999999999876 789999999999999999999877653211 0 1111100 0 0
Q ss_pred cccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 538 RDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 538 ~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
+. ++...+.++.+++.+||+.||++|||++|+++.
T Consensus 271 ~~----~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 271 PE----FTAGLSSELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp HH----HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cc----cccCCCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 00 111234779999999999999999999999874
No 122
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=8.6e-41 Score=343.87 Aligned_cols=266 Identities=22% Similarity=0.257 Sum_probs=201.4
Q ss_pred CCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCCccc--HHHHHHHHHHHHhccCCcccceeeeeecCCceEEEEe
Q 006907 303 GNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNFTG--EVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYP 379 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E 379 (626)
++|.+.+.||+|+||.||+|... +++.||+|++....... ...+.+|++++++++||||+++++++.+.+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 56888999999999999999865 48899999987654332 3467889999999999999999999999999999999
Q ss_pred ecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccCCC
Q 006907 380 YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRR 459 (626)
Q Consensus 380 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~ 459 (626)
|+++++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 83 ~~~~~~l~~~~~~~----~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 155 (311)
T 4agu_A 83 YCDHTVLHELDRYQ----RGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGP 155 (311)
T ss_dssp CCSEEHHHHHHHTS----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC--
T ss_pred eCCCchHHHHHhhh----cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCc
Confidence 99999999988642 3489999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCceeeeecccCCccCcccccc-CCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHH--------hhhcc
Q 006907 460 DSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT--------LHEER 530 (626)
Q Consensus 460 ~~~~~~~~~gt~~y~aPE~~~~-~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~--------~~~~~ 530 (626)
... .....||+.|+|||.+.+ ..++.++||||||+++|+|++|+.||...........+...... .....
T Consensus 156 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (311)
T 4agu_A 156 SDY-YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQ 234 (311)
T ss_dssp -----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCG
T ss_pred ccc-cCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccccc
Confidence 222 233458999999999976 56899999999999999999999999865543322222211110 00000
Q ss_pred ccccccccccCCCCC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 531 RLDVLIDRDLKGSFD-----PTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 531 ~~~~~~~~~l~~~~~-----~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
.......+......+ +..+..+.+++.+||+.||++|||++|+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 235 YFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp GGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred ccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 000000000000000 1235678999999999999999999999984
No 123
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-40 Score=346.03 Aligned_cols=259 Identities=26% Similarity=0.467 Sum_probs=204.2
Q ss_pred hCCCCcCceeccCCCceEEEEEeCC-----ccEEEEEEecCCCcc-cHHHHHHHHHHHHhccCCcccceeeeeecCCceE
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCLPN-----RMVVAVKRLKDPNFT-GEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERL 375 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 375 (626)
..+|...+.||+|+||.||+|.... +..||+|+++..... ....+.+|+++++.++||||+++++++.+.+..+
T Consensus 43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 122 (333)
T 1mqb_A 43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM 122 (333)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcE
Confidence 3456778999999999999997542 346999999765432 3446889999999999999999999999999999
Q ss_pred EEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccc
Q 006907 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKL 455 (626)
Q Consensus 376 lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~ 455 (626)
+||||+++|+|.+++... ...+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||++..
T Consensus 123 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 196 (333)
T 1mqb_A 123 IITEYMENGALDKFLREK---DGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRV 196 (333)
T ss_dssp EEEECCTTEEHHHHHHHT---TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred EEEeCCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchh
Confidence 999999999999999753 23589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCc--eeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHh-CCCcCCCCCcccccccHHHHHHHhhhcccc
Q 006907 456 LDRRDSH--VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNGQVQKGMILDCVRTLHEERRL 532 (626)
Q Consensus 456 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~ 532 (626)
....... ......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||....... + ........
T Consensus 197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~----~---~~~~~~~~-- 267 (333)
T 1mqb_A 197 LEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE----V---MKAINDGF-- 267 (333)
T ss_dssp --------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH----H---HHHHHTTC--
T ss_pred hccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHH----H---HHHHHCCC--
Confidence 6543221 1222336788999999999999999999999999999999 999997543211 1 11111111
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccc
Q 006907 533 DVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEP 583 (626)
Q Consensus 533 ~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~ 583 (626)
....+...+..+.+++.+||+.||++||++.|+++.|+.+...
T Consensus 268 --------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 310 (333)
T 1mqb_A 268 --------RLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA 310 (333)
T ss_dssp --------CCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred --------cCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 1112233457789999999999999999999999999987764
No 124
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=6.1e-41 Score=350.24 Aligned_cols=251 Identities=21% Similarity=0.294 Sum_probs=197.6
Q ss_pred hCCCCcCceeccCCCceEEEEEeCCccEEEEEEecCCCcc--cHHHHHHHHHHHHhccC--CcccceeeeeecCCceEEE
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFT--GEVQFQTEVEMIGLALH--RNLLRLYGFCMTPEERLLV 377 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h--~nIv~l~~~~~~~~~~~lv 377 (626)
.+.|.+.+.||+|+||.||++...+++.||||++...... ....+.+|++++..++| |||+++++++.++...++|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 4568889999999999999999888999999999755432 23568899999999986 9999999999999999999
Q ss_pred EeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccC
Q 006907 378 YPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLD 457 (626)
Q Consensus 378 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~ 457 (626)
|| +.+++|.+++... ..+++..+..++.|++.||.|||++ +|+||||||+|||++ ++.+||+|||++....
T Consensus 88 ~e-~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~ 158 (343)
T 3dbq_A 88 ME-CGNIDLNSWLKKK----KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 158 (343)
T ss_dssp EC-CCSEEHHHHHHHS----CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-
T ss_pred Ee-CCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccC
Confidence 99 4588999999763 3589999999999999999999999 999999999999997 5789999999998765
Q ss_pred CCCCc-eeeeecccCCccCcccccc-----------CCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHH
Q 006907 458 RRDSH-VTTAVRGTVGHIAPEYLST-----------GQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525 (626)
Q Consensus 458 ~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~ 525 (626)
..... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... +......
T Consensus 159 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-----~~~~~~~ 233 (343)
T 3dbq_A 159 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ-----ISKLHAI 233 (343)
T ss_dssp -----------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSH-----HHHHHHH
T ss_pred cccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhH-----HHHHHHH
Confidence 43322 2234569999999999965 67899999999999999999999999743211 1111111
Q ss_pred hhhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 526 LHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 526 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
.++.....++...+..+.+++.+||+.||++|||+.|+++.
T Consensus 234 ----------~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 234 ----------IDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp ----------HCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ----------hcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 11111122222334678999999999999999999999984
No 125
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.3e-40 Score=373.36 Aligned_cols=257 Identities=24% Similarity=0.364 Sum_probs=205.6
Q ss_pred CCCcCc-eeccCCCceEEEEEeC---CccEEEEEEecCCCc-ccHHHHHHHHHHHHhccCCcccceeeeeecCCceEEEE
Q 006907 304 NFSPKN-ILGQGGYGVVYKGCLP---NRMVVAVKRLKDPNF-TGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVY 378 (626)
Q Consensus 304 ~f~~~~-~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 378 (626)
++.+.+ .||+|+||.||+|.+. ++..||||+++.... ....++.+|+++++.++|||||++++++.. +..++||
T Consensus 336 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~ 414 (613)
T 2ozo_A 336 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVM 414 (613)
T ss_dssp SEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEE
T ss_pred ceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEE
Confidence 333444 7999999999999763 467899999986532 345679999999999999999999999976 5689999
Q ss_pred eecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccCC
Q 006907 379 PYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDR 458 (626)
Q Consensus 379 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~ 458 (626)
||+++|+|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+|||+++++.+||+|||+++....
T Consensus 415 E~~~~g~L~~~l~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~ 488 (613)
T 2ozo_A 415 EMAGGGPLHKFLVGK---REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGA 488 (613)
T ss_dssp ECCTTCBHHHHHTTC---TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-
T ss_pred EeCCCCcHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccC
Confidence 999999999999643 34599999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCcee--eeecccCCccCccccccCCCCccchhHHHHHHHHHHHh-CCCcCCCCCcccccccHHHHHHHhhhccccccc
Q 006907 459 RDSHVT--TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNGQVQKGMILDCVRTLHEERRLDVL 535 (626)
Q Consensus 459 ~~~~~~--~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 535 (626)
...... ....+|+.|+|||++.+..++.++|||||||++|||++ |+.||....... +... ....
T Consensus 489 ~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~----~~~~---i~~~------ 555 (613)
T 2ozo_A 489 DDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE----VMAF---IEQG------ 555 (613)
T ss_dssp -------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH----HHHH---HHTT------
T ss_pred CCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH----HHHH---HHcC------
Confidence 332222 22235689999999999999999999999999999998 999998654321 1111 1111
Q ss_pred cccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccch
Q 006907 536 IDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEPV 584 (626)
Q Consensus 536 ~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~~ 584 (626)
.....+..++.++.+++.+||+.+|++||++.+|++.|+.+....
T Consensus 556 ----~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~ 600 (613)
T 2ozo_A 556 ----KRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL 600 (613)
T ss_dssp ----CCCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred ----CCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 112233445688999999999999999999999999999876653
No 126
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=7.7e-41 Score=338.78 Aligned_cols=247 Identities=28% Similarity=0.429 Sum_probs=201.7
Q ss_pred hCCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCC---cccHHHHHHHHHHHHhccCCcccceeeeeecCCceEEE
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPN---FTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLV 377 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv 377 (626)
.++|.+.+.||+|+||.||+|... ++..||+|++.... ......+.+|+.+++.++||||+++++++.+....++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 456888999999999999999864 47789999986432 12245688999999999999999999999999999999
Q ss_pred EeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccC
Q 006907 378 YPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLD 457 (626)
Q Consensus 378 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~ 457 (626)
|||+++|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.++|+|||++....
T Consensus 88 ~e~~~~~~l~~~l~~~~----~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~ 160 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKLS----KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP 160 (279)
T ss_dssp ECCCTTEEHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC-
T ss_pred EecCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCC
Confidence 99999999999997642 489999999999999999999999 99999999999999999999999999986543
Q ss_pred CCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccccccccc
Q 006907 458 RRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLID 537 (626)
Q Consensus 458 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 537 (626)
.. ......||+.|+|||.+.+..++.++||||||+++|+|++|+.||........ ......
T Consensus 161 ~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-------~~~~~~--------- 221 (279)
T 3fdn_A 161 SS---RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET-------YKRISR--------- 221 (279)
T ss_dssp ----------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH-------HHHHHH---------
T ss_pred cc---cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHH-------HHHHHh---------
Confidence 22 22344589999999999999999999999999999999999999975432211 111111
Q ss_pred cccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 538 RDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 538 ~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
....++...+..+.+++.+||+.||++|||+.|+++.
T Consensus 222 --~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 222 --VEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp --TCCCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred --CCCCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0111223345778899999999999999999999985
No 127
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.8e-41 Score=353.99 Aligned_cols=261 Identities=30% Similarity=0.450 Sum_probs=198.2
Q ss_pred CCCcCceeccCCCceEEEEEeC--C--ccEEEEEEecCCCc-ccHHHHHHHHHHHHhccCCcccceeeeeec-CCceEEE
Q 006907 304 NFSPKNILGQGGYGVVYKGCLP--N--RMVVAVKRLKDPNF-TGEVQFQTEVEMIGLALHRNLLRLYGFCMT-PEERLLV 377 (626)
Q Consensus 304 ~f~~~~~lG~G~~g~Vy~~~~~--~--~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~-~~~~~lv 377 (626)
.|.+.++||+|+||.||+|.+. + +..||+|.++.... .....+.+|+.++++++||||+++++++.. .+..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 3556789999999999999853 2 24689999875432 334678999999999999999999998754 4578999
Q ss_pred EeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccC
Q 006907 378 YPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLD 457 (626)
Q Consensus 378 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~ 457 (626)
|||+++|+|.+++... ...+++..+..++.|++.||.|||++ +|+||||||+|||+++++.+||+|||+++...
T Consensus 170 ~e~~~~g~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~ 243 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMY 243 (373)
T ss_dssp EECCTTCBHHHHHHCT---TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred EECCCCCCHHHHHhhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeecccccccc
Confidence 9999999999999743 33588999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCc---eeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHh-CCCcCCCCCcccccccHHHHHHHhhhccccc
Q 006907 458 RRDSH---VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNGQVQKGMILDCVRTLHEERRLD 533 (626)
Q Consensus 458 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~ 533 (626)
..... ......+|+.|+|||.+.+..++.++||||||+++|||++ |.+||....... +.... .....
T Consensus 244 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~----~~~~~---~~~~~-- 314 (373)
T 3c1x_A 244 DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD----ITVYL---LQGRR-- 314 (373)
T ss_dssp --------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC----HHHHH---HTTCC--
T ss_pred ccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH----HHHHH---HcCCC--
Confidence 33211 1223447789999999999999999999999999999999 667776443221 11111 11111
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccchhhh
Q 006907 534 VLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEPVTEE 587 (626)
Q Consensus 534 ~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~~~~~ 587 (626)
...+...+..+.+++.+||+.||++|||+.|+++.|+.+...+..+
T Consensus 315 --------~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~ 360 (373)
T 3c1x_A 315 --------LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 360 (373)
T ss_dssp --------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSC
T ss_pred --------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcccc
Confidence 1112234567899999999999999999999999999988765543
No 128
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=4.7e-41 Score=354.23 Aligned_cols=247 Identities=24% Similarity=0.272 Sum_probs=194.0
Q ss_pred CCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCCcc---cHHHHHHHHHH-HHhccCCcccceeeeeecCCceEEE
Q 006907 303 GNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNFT---GEVQFQTEVEM-IGLALHRNLLRLYGFCMTPEERLLV 377 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~-l~~l~h~nIv~l~~~~~~~~~~~lv 377 (626)
++|++.++||+|+||.||++... +++.||+|+++..... ....+..|..+ ++.++||||+++++++.+.+..++|
T Consensus 38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv 117 (373)
T 2r5t_A 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV 117 (373)
T ss_dssp GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence 46888999999999999999865 5788999999754322 23345667666 5678999999999999999999999
Q ss_pred EeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccC
Q 006907 378 YPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLD 457 (626)
Q Consensus 378 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~ 457 (626)
|||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++++||+|||+++...
T Consensus 118 ~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~~ 190 (373)
T 2r5t_A 118 LDYINGGELFYHLQRER----CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENI 190 (373)
T ss_dssp EECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGGB
T ss_pred EeCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccccccc
Confidence 99999999999997632 488999999999999999999999 99999999999999999999999999998643
Q ss_pred CCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccccccccc
Q 006907 458 RRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLID 537 (626)
Q Consensus 458 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 537 (626)
... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...+..... ...... .
T Consensus 191 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~-------~~i~~~-~------ 255 (373)
T 2r5t_A 191 EHN-STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMY-------DNILNK-P------ 255 (373)
T ss_dssp CCC-CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHH-------HHHHHS-C------
T ss_pred cCC-CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHH-------HHHHhc-c------
Confidence 322 2234456999999999999999999999999999999999999999754422111 111110 0
Q ss_pred cccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006907 538 RDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLK 575 (626)
Q Consensus 538 ~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 575 (626)
..++...+..+.+++.+||+.||++||++.+.++
T Consensus 256 ----~~~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~ 289 (373)
T 2r5t_A 256 ----LQLKPNITNSARHLLEGLLQKDRTKRLGAKDDFM 289 (373)
T ss_dssp ----CCCCSSSCHHHHHHHHHHTCSSGGGSTTTTTTHH
T ss_pred ----cCCCCCCCHHHHHHHHHHcccCHHhCCCCCCCHH
Confidence 0122234477899999999999999999864433
No 129
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=1.1e-40 Score=345.48 Aligned_cols=251 Identities=20% Similarity=0.286 Sum_probs=182.4
Q ss_pred CceeccCCCceEEEEEeC-CccEEEEEEecCCCcccHHHHHHHHHHHHhcc-CCcccceeeeeecCCceEEEEeecCCCC
Q 006907 308 KNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNFTGEVQFQTEVEMIGLAL-HRNLLRLYGFCMTPEERLLVYPYMPNGS 385 (626)
Q Consensus 308 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lv~E~~~~gs 385 (626)
.+.||+|+||.||++... +++.||||++... ....+.+|+.+++.+. ||||+++++++.+....++||||+++|+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence 478999999999999864 5889999998642 3457788999999997 9999999999999999999999999999
Q ss_pred hHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCC---cEEEeeccCccccCCCCCc
Q 006907 386 VADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESF---EAVVGDFGLAKLLDRRDSH 462 (626)
Q Consensus 386 L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~---~~ki~DfG~a~~~~~~~~~ 462 (626)
|.+++... ..+++..+..++.|++.||.|||++ +|+||||||+||+++.++ .+||+|||++........
T Consensus 93 L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~- 164 (325)
T 3kn6_A 93 LFERIKKK----KHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ- 164 (325)
T ss_dssp HHHHHHHC----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC----
T ss_pred HHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC-
Confidence 99999763 3599999999999999999999999 999999999999997665 899999999986654322
Q ss_pred eeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccccccccccccCC
Q 006907 463 VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDRDLKG 542 (626)
Q Consensus 463 ~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~ 542 (626)
......||+.|+|||++.+..++.++||||||+++|||++|+.||...+.........+........... ...
T Consensus 165 ~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~-------~~~ 237 (325)
T 3kn6_A 165 PLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFS-------FEG 237 (325)
T ss_dssp -------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCC-------CCS
T ss_pred cccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCC-------CCc
Confidence 2234458999999999999999999999999999999999999998654432222233332222211100 000
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 543 SFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 543 ~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
......+.++.+++.+||+.||++|||++|+++.
T Consensus 238 ~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 238 EAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp HHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred ccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 0002235789999999999999999999998764
No 130
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=4.9e-40 Score=335.55 Aligned_cols=263 Identities=17% Similarity=0.195 Sum_probs=209.0
Q ss_pred hCCCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCCcccHHHHHHHHHHHHhccCCcccceeeee-ecCCceEEEEe
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFC-MTPEERLLVYP 379 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~-~~~~~~~lv~E 379 (626)
.++|.+.+.||+|+||.||+|.. .+++.||+|++..... ..++.+|+.+++.++|++++..++++ ......++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence 46788999999999999999985 6788999999875432 23688999999999998877777666 55667799999
Q ss_pred ecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe---CCCCcEEEeeccCcccc
Q 006907 380 YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILL---DESFEAVVGDFGLAKLL 456 (626)
Q Consensus 380 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl---~~~~~~ki~DfG~a~~~ 456 (626)
|+ +++|.+++... ...+++..+..++.|++.||.|||++ +|+||||||+||++ ++++.+||+|||++...
T Consensus 86 ~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~ 158 (296)
T 3uzp_A 86 LL-GPSLEDLFNFC---SRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY 158 (296)
T ss_dssp CC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred ec-CCCHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccc
Confidence 99 89999999743 23599999999999999999999999 99999999999999 48889999999999876
Q ss_pred CCCCCc------eeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhcc
Q 006907 457 DRRDSH------VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEER 530 (626)
Q Consensus 457 ~~~~~~------~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~ 530 (626)
...... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||...........+..........
T Consensus 159 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~- 237 (296)
T 3uzp_A 159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST- 237 (296)
T ss_dssp BCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHS-
T ss_pred cccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCC-
Confidence 554331 1234468999999999999999999999999999999999999998654333322222221111110
Q ss_pred ccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccc
Q 006907 531 RLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEP 583 (626)
Q Consensus 531 ~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~ 583 (626)
.. +.+ ....+..+.+++.+||+.||++|||+.++++.|+.+...
T Consensus 238 ~~-----~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 281 (296)
T 3uzp_A 238 PI-----EVL----CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 281 (296)
T ss_dssp CH-----HHH----TTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHH
T ss_pred ch-----HHH----HhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHh
Confidence 00 000 012246789999999999999999999999999987654
No 131
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=3.8e-42 Score=352.27 Aligned_cols=258 Identities=24% Similarity=0.325 Sum_probs=189.6
Q ss_pred hCCCCcCceeccCCCceEEEEEeCCccEEEEEEecCCCcccHHHHHHHHHHHHh--ccCCcccceeeeeecCC----ceE
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGL--ALHRNLLRLYGFCMTPE----ERL 375 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~nIv~l~~~~~~~~----~~~ 375 (626)
.++|.+.+.||+|+||.||+|... ++.||||+++.. ....+..|.+++.. ++||||+++++++.... ..+
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 77 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEE
T ss_pred cceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeE
Confidence 357899999999999999999875 778999998643 34567778888876 78999999999998776 679
Q ss_pred EEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCeEecCCCCCcEEeCCCCcEEE
Q 006907 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLH--------EQCNPKIIHRDVKAANILLDESFEAVV 447 (626)
Q Consensus 376 lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH--------~~~~~~ivH~Dlkp~NILl~~~~~~ki 447 (626)
+||||+++|+|.++++.. .+++..+..++.|++.||.||| +. +|+||||||+|||++.++.+||
T Consensus 78 lv~e~~~~g~L~~~l~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~kl 149 (303)
T 3gxj_A 78 LVSDYHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCI 149 (303)
T ss_dssp EEEECCTTCCHHHHHHHC-----CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-B
T ss_pred EEEeccCCCCHHHHHhcc-----CcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCEEE
Confidence 999999999999999653 4788889999999999999999 77 9999999999999999999999
Q ss_pred eeccCccccCCCCCce---eeeecccCCccCccccccC------CCCccchhHHHHHHHHHHHhC----------CCcCC
Q 006907 448 GDFGLAKLLDRRDSHV---TTAVRGTVGHIAPEYLSTG------QSSEKTDVFGFGVLLLELITG----------QKALD 508 (626)
Q Consensus 448 ~DfG~a~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~t~~~DvwSlGvil~elltg----------~~p~~ 508 (626)
+|||++.......... .....||+.|+|||++.+. .++.++||||||+++|||++| +.||.
T Consensus 150 ~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~ 229 (303)
T 3gxj_A 150 ADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYY 229 (303)
T ss_dssp CCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTT
T ss_pred eecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeecccc
Confidence 9999997765443322 1233599999999999776 344689999999999999999 55554
Q ss_pred CCCcccc-cccHHHHHHHhhhccccccccccccCCCCC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccc
Q 006907 509 VGNGQVQ-KGMILDCVRTLHEERRLDVLIDRDLKGSFD-----PTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVE 582 (626)
Q Consensus 509 ~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~ 582 (626)
....... ...+... ..........+ ...+..+.+++.+||+.||++|||+.|+++.|+.+..
T Consensus 230 ~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~ 297 (303)
T 3gxj_A 230 DLVPSDPSVEEMRKV------------VCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp TTCC-CCCCC-CHHH------------HTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CC
T ss_pred ccCCCCccHHHHHHH------------HHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhh
Confidence 3221111 0111111 11111122222 2667889999999999999999999999999998876
Q ss_pred c
Q 006907 583 P 583 (626)
Q Consensus 583 ~ 583 (626)
.
T Consensus 298 ~ 298 (303)
T 3gxj_A 298 Q 298 (303)
T ss_dssp C
T ss_pred h
Confidence 4
No 132
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=3.6e-41 Score=364.71 Aligned_cols=249 Identities=22% Similarity=0.255 Sum_probs=196.4
Q ss_pred hCCCCcCceeccCCCceEEEEEe-CCccEEEEEEecCC---CcccHHHHHHHHHHHHhccCCcccceeeeeecCCceEEE
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDP---NFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLV 377 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv 377 (626)
.++|++.++||+|+||.||+|.. .+++.||+|+++.. .......+.+|+++++.++||||+++++++.+.+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 35688899999999999999985 46889999998743 122234577899999999999999999999999999999
Q ss_pred EeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEecCCCCCcEEeCCCCcEEEeeccCcccc
Q 006907 378 YPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHE-QCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL 456 (626)
Q Consensus 378 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~-~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~ 456 (626)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+ . +|+||||||+|||++.++.+||+|||++...
T Consensus 227 ~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 299 (446)
T 4ejn_A 227 MEYANGGELFFHLSRER----VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEG 299 (446)
T ss_dssp ECCCSSCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTT
T ss_pred EeeCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceec
Confidence 99999999999997642 48999999999999999999998 7 9999999999999999999999999999764
Q ss_pred CCCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhcccccccc
Q 006907 457 DRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLI 536 (626)
Q Consensus 457 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 536 (626)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...+.... . ...... .
T Consensus 300 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~----~---~~i~~~-~----- 365 (446)
T 4ejn_A 300 IKDG-ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL----F---ELILME-E----- 365 (446)
T ss_dssp CC------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----H---HHHHHC-C-----
T ss_pred cCCC-cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHH----H---HHHHhC-C-----
Confidence 3322 223345699999999999999999999999999999999999999975442211 1 111111 0
Q ss_pred ccccCCCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 006907 537 DRDLKGSFDPTELEKMVQLALQCTQSHPNLRP-----KMSEVLKV 576 (626)
Q Consensus 537 ~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RP-----s~~evl~~ 576 (626)
..++...+.++.+++.+||+.||++|| +++|+++.
T Consensus 366 -----~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h 405 (446)
T 4ejn_A 366 -----IRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 405 (446)
T ss_dssp -----CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred -----CCCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence 112233457889999999999999999 99999874
No 133
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1.7e-40 Score=352.93 Aligned_cols=270 Identities=19% Similarity=0.233 Sum_probs=203.8
Q ss_pred hCCCCcCceeccC--CCceEEEEEeC-CccEEEEEEecCCCcc--cHHHHHHHHHHHHhccCCcccceeeeeecCCceEE
Q 006907 302 TGNFSPKNILGQG--GYGVVYKGCLP-NRMVVAVKRLKDPNFT--GEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLL 376 (626)
Q Consensus 302 ~~~f~~~~~lG~G--~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 376 (626)
.++|++.++||+| +||.||+|... +++.||||+++..... ....+.+|+++++.++||||+++++++.+++..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 4578899999999 99999999865 6899999999754322 23467889999999999999999999999999999
Q ss_pred EEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCcccc
Q 006907 377 VYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL 456 (626)
Q Consensus 377 v~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~ 456 (626)
||||+++|+|.+++.... ...+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||.+...
T Consensus 104 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~ 178 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHF--MDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSM 178 (389)
T ss_dssp EEECCTTCBHHHHHHHTC--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEEccCCCCHHHHHhhhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceee
Confidence 999999999999997642 23589999999999999999999999 9999999999999999999999999988654
Q ss_pred CCCCC------ceeeeecccCCccCcccccc--CCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHH-HHHHhh
Q 006907 457 DRRDS------HVTTAVRGTVGHIAPEYLST--GQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILD-CVRTLH 527 (626)
Q Consensus 457 ~~~~~------~~~~~~~gt~~y~aPE~~~~--~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~-~~~~~~ 527 (626)
..... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...........+.. ......
T Consensus 179 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 258 (389)
T 3gni_B 179 ISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLL 258 (389)
T ss_dssp EETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC---------
T ss_pred ccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccc
Confidence 32111 11122358899999999987 5789999999999999999999999976443222111110 000000
Q ss_pred h-----ccc-------------cccccc---------cccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 528 E-----ERR-------------LDVLID---------RDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 528 ~-----~~~-------------~~~~~~---------~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
. ... ...... ......++...+..+.+|+.+||+.||++|||+.|+++.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 259 DTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp -----------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred cccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 0 000 000000 000001223345779999999999999999999999874
No 134
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.7e-40 Score=341.46 Aligned_cols=268 Identities=26% Similarity=0.355 Sum_probs=204.3
Q ss_pred HHHHHHhCCCCcCceeccCCCceEEEEEeCCccEEEEEEecCCCcccHHHHHHHHHHHHh--ccCCcccceeeeeecC--
Q 006907 296 RELQIATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGL--ALHRNLLRLYGFCMTP-- 371 (626)
Q Consensus 296 ~~~~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~nIv~l~~~~~~~-- 371 (626)
.......++|.+.+.||+|+||.||+|... ++.||||++... ....+..|.+++.. ++||||+++++++...
T Consensus 30 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~ 105 (337)
T 3mdy_A 30 LVQRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTG 105 (337)
T ss_dssp HHHTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCG
T ss_pred ccccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCC
Confidence 334445678999999999999999999875 788999998642 23445556666554 4899999999999877
Q ss_pred --CceEEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-----CCCeEecCCCCCcEEeCCCCc
Q 006907 372 --EERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQC-----NPKIIHRDVKAANILLDESFE 444 (626)
Q Consensus 372 --~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~-----~~~ivH~Dlkp~NILl~~~~~ 444 (626)
...++||||+++|+|.++++.. .+++..+..++.|++.||.|||+.+ +++|+||||||+||+++.++.
T Consensus 106 ~~~~~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~ 180 (337)
T 3mdy_A 106 SWTQLYLITDYHENGSLYDYLKST-----TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGT 180 (337)
T ss_dssp GGCEEEEEECCCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSC
T ss_pred CCCceEEEEeccCCCcHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCC
Confidence 6789999999999999999752 4899999999999999999999752 448999999999999999999
Q ss_pred EEEeeccCccccCCCCCcee---eeecccCCccCccccccCCCCcc------chhHHHHHHHHHHHhC----------CC
Q 006907 445 AVVGDFGLAKLLDRRDSHVT---TAVRGTVGHIAPEYLSTGQSSEK------TDVFGFGVLLLELITG----------QK 505 (626)
Q Consensus 445 ~ki~DfG~a~~~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~t~~------~DvwSlGvil~elltg----------~~ 505 (626)
+||+|||++........... ....||+.|+|||++.+...+.+ +|||||||++|||++| +.
T Consensus 181 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~ 260 (337)
T 3mdy_A 181 CCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQL 260 (337)
T ss_dssp EEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCC
T ss_pred EEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccc
Confidence 99999999976654332211 23458999999999987766655 9999999999999999 55
Q ss_pred cCCCCCcccccccHHHHHHHhhhccccccccccccCCCC-----CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhc
Q 006907 506 ALDVGNGQVQKGMILDCVRTLHEERRLDVLIDRDLKGSF-----DPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVL 580 (626)
Q Consensus 506 p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l 580 (626)
||......... .... ...... ....... ....+.++.+++.+||+.||++|||+.|+++.|+.+
T Consensus 261 p~~~~~~~~~~--~~~~-~~~~~~--------~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l 329 (337)
T 3mdy_A 261 PYHDLVPSDPS--YEDM-REIVCI--------KKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKM 329 (337)
T ss_dssp TTTTTSCSSCC--HHHH-HHHHTT--------SCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred cHhhhcCCCCc--hhhh-HHHHhh--------hccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHH
Confidence 55433222111 1111 111111 1111112 236788899999999999999999999999999987
Q ss_pred ccc
Q 006907 581 VEP 583 (626)
Q Consensus 581 ~~~ 583 (626)
...
T Consensus 330 ~~~ 332 (337)
T 3mdy_A 330 SES 332 (337)
T ss_dssp HHT
T ss_pred Hhh
Confidence 654
No 135
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=1.5e-40 Score=339.98 Aligned_cols=260 Identities=29% Similarity=0.444 Sum_probs=203.7
Q ss_pred CCCCcCceeccCCCceEEEEEeCC----ccEEEEEEecCCCc-ccHHHHHHHHHHHHhccCCcccceeeeee-cCCceEE
Q 006907 303 GNFSPKNILGQGGYGVVYKGCLPN----RMVVAVKRLKDPNF-TGEVQFQTEVEMIGLALHRNLLRLYGFCM-TPEERLL 376 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~-~~~~~~l 376 (626)
.+|.+.++||+|+||.||+|...+ +..+|+|.++.... .....+.+|+.++++++||||+++++++. .+...++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 357778999999999999998542 23689999876443 23456899999999999999999999864 4567899
Q ss_pred EEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCcccc
Q 006907 377 VYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL 456 (626)
Q Consensus 377 v~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~ 456 (626)
||||+++|+|.+++... ...+++..+..++.|++.||.|||++ +|+||||||+||++++++.+||+|||++...
T Consensus 105 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~ 178 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDM 178 (298)
T ss_dssp EEECCTTCBHHHHHHCT---TCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCCC
T ss_pred EEeCCCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECcccccccc
Confidence 99999999999999742 34589999999999999999999999 9999999999999999999999999999866
Q ss_pred CCCCC---ceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhC-CCcCCCCCcccccccHHHHHHHhhhcccc
Q 006907 457 DRRDS---HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITG-QKALDVGNGQVQKGMILDCVRTLHEERRL 532 (626)
Q Consensus 457 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg-~~p~~~~~~~~~~~~i~~~~~~~~~~~~~ 532 (626)
..... .......+|+.|+|||.+.+..++.++||||||+++|||++| .+||....... ..... ....
T Consensus 179 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~----~~~~~---~~~~-- 249 (298)
T 3f66_A 179 YDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD----ITVYL---LQGR-- 249 (298)
T ss_dssp SCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTT----HHHHH---HTTC--
T ss_pred cccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHH----HHHHH---hcCC--
Confidence 43321 122334478899999999999999999999999999999995 55554332211 11111 1110
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccchh
Q 006907 533 DVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEPVT 585 (626)
Q Consensus 533 ~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~~~ 585 (626)
....+...+..+.+++.+||+.||++|||+.|+++.|+++...+.
T Consensus 250 --------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~ 294 (298)
T 3f66_A 250 --------RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 294 (298)
T ss_dssp --------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSC
T ss_pred --------CCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence 011122234678999999999999999999999999999877543
No 136
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.8e-40 Score=339.03 Aligned_cols=260 Identities=30% Similarity=0.419 Sum_probs=205.9
Q ss_pred CCcCceeccCCCceEEEEEeCC----ccEEEEEEecCCCcc-cHHHHHHHHHHHHhccCCcccceeeeeecCCce-EEEE
Q 006907 305 FSPKNILGQGGYGVVYKGCLPN----RMVVAVKRLKDPNFT-GEVQFQTEVEMIGLALHRNLLRLYGFCMTPEER-LLVY 378 (626)
Q Consensus 305 f~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~-~lv~ 378 (626)
|...++||+|+||.||+|.+.+ +..||+|+++..... ....+.+|+.+++.++||||+++++++.+.+.. ++|+
T Consensus 23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~ 102 (298)
T 3pls_A 23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL 102 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEE
Confidence 4556899999999999997532 347999999764432 345688999999999999999999999876665 9999
Q ss_pred eecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccCC
Q 006907 379 PYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDR 458 (626)
Q Consensus 379 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~ 458 (626)
||+.+|+|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+||++++++.+||+|||++.....
T Consensus 103 e~~~~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 176 (298)
T 3pls_A 103 PYMCHGDLLQFIRSP---QRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILD 176 (298)
T ss_dssp CCCTTCBHHHHHHCT---TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTTT
T ss_pred ecccCCCHHHHHhcc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcccccC
Confidence 999999999999752 34589999999999999999999999 999999999999999999999999999976543
Q ss_pred CC---CceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccccccc
Q 006907 459 RD---SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVL 535 (626)
Q Consensus 459 ~~---~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 535 (626)
.. ........+|+.|+|||.+.+..++.++||||||+++|||++|+.|+....... .+...... ..
T Consensus 177 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~---~~~~~~~~---~~----- 245 (298)
T 3pls_A 177 REYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPF---DLTHFLAQ---GR----- 245 (298)
T ss_dssp GGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGG---GHHHHHHT---TC-----
T ss_pred CcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHH---HHHHHhhc---CC-----
Confidence 22 112223457889999999999999999999999999999999666654332211 11111111 10
Q ss_pred cccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccchhh
Q 006907 536 IDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEPVTE 586 (626)
Q Consensus 536 ~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~~~~ 586 (626)
....+...+..+.+++.+||+.||.+|||+.|+++.|+.+...+..
T Consensus 246 -----~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~ 291 (298)
T 3pls_A 246 -----RLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLG 291 (298)
T ss_dssp -----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCS
T ss_pred -----CCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhc
Confidence 1112223346799999999999999999999999999998776443
No 137
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.8e-40 Score=335.33 Aligned_cols=246 Identities=21% Similarity=0.329 Sum_probs=182.5
Q ss_pred CCCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCCc---ccHHHHHHHHHHHHhccCCcccceeeeeecCCceEEEE
Q 006907 303 GNFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPNF---TGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVY 378 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 378 (626)
++|++.+.||+|+||.||+|.. .+++.||+|++..... .....+.+|+++++.++||||+++++++.+.+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 4789999999999999999985 4688999999976532 23457889999999999999999999999999999999
Q ss_pred eecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccCC
Q 006907 379 PYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDR 458 (626)
Q Consensus 379 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~ 458 (626)
||+ +++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||++++++.+||+|||++.....
T Consensus 93 e~~-~~~l~~~~~~~----~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 164 (275)
T 2eue_A 93 EYA-GNELFDYIVQR----DKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp ECC-CEEHHHHHHTS----SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC-----
T ss_pred hhc-CCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccC
Confidence 999 67888888653 3489999999999999999999999 999999999999999999999999999976544
Q ss_pred CCCceeeeecccCCccCccccccCCC-CccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccccccccc
Q 006907 459 RDSHVTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLID 537 (626)
Q Consensus 459 ~~~~~~~~~~gt~~y~aPE~~~~~~~-t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 537 (626)
.. ......||+.|+|||.+.+..+ +.++||||||+++|||++|+.||....... ........ .
T Consensus 165 ~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-------~~~~~~~~-~------ 228 (275)
T 2eue_A 165 GN--FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV-------LFKNISNG-V------ 228 (275)
T ss_dssp ------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHH-------HHHHHHHT-C------
T ss_pred cc--cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH-------HHHHHHhC-C------
Confidence 32 2233458999999999987765 789999999999999999999997543211 11111111 0
Q ss_pred cccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 538 RDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 538 ~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
...+...+..+.+++.+||+.||++|||++|+++.
T Consensus 229 ----~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 229 ----YTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp ----CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred ----CCCCccCCHHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 11222345678999999999999999999999874
No 138
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=4.9e-41 Score=349.64 Aligned_cols=276 Identities=25% Similarity=0.366 Sum_probs=202.6
Q ss_pred HhCCCCcCceeccCCCceEEEEEeCCccEEEEEEecCCCcccHHHHHHHHHH--HHhccCCcccceeeeee-----cCCc
Q 006907 301 ATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEM--IGLALHRNLLRLYGFCM-----TPEE 373 (626)
Q Consensus 301 ~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~--l~~l~h~nIv~l~~~~~-----~~~~ 373 (626)
..++|.+.+.||+|+||.||+|.. +++.||||+++.. ....+..|.++ +..++||||+++++.+. ....
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 86 (336)
T 3g2f_A 11 DLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFA---NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME 86 (336)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEE
T ss_pred ChHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeecc---chhhHHHHHHHHHHHhccCcchhhheecccccccCCCce
Confidence 346788899999999999999976 5788999998643 23344444444 44589999999998553 2235
Q ss_pred eEEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcC------CCCeEecCCCCCcEEeCCCCcEEE
Q 006907 374 RLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQC------NPKIIHRDVKAANILLDESFEAVV 447 (626)
Q Consensus 374 ~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~------~~~ivH~Dlkp~NILl~~~~~~ki 447 (626)
.++||||+++|+|.+++... ..++..+..++.|++.||.|||+.+ .++|+||||||+|||++.++.+||
T Consensus 87 ~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL 161 (336)
T 3g2f_A 87 YLLVMEYYPNGSLXKYLSLH-----TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVI 161 (336)
T ss_dssp EEEEECCCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEE
T ss_pred EEEEEecCCCCcHHHHHhhc-----ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEE
Confidence 68999999999999999753 2589999999999999999999863 348999999999999999999999
Q ss_pred eeccCccccCCCCC-------ceeeeecccCCccCcccccc-------CCCCccchhHHHHHHHHHHHhCCCcCCCCCcc
Q 006907 448 GDFGLAKLLDRRDS-------HVTTAVRGTVGHIAPEYLST-------GQSSEKTDVFGFGVLLLELITGQKALDVGNGQ 513 (626)
Q Consensus 448 ~DfG~a~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~-------~~~t~~~DvwSlGvil~elltg~~p~~~~~~~ 513 (626)
+|||++..+..... .......||+.|+|||++.+ ..++.++||||||+++|||++|+.||......
T Consensus 162 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~ 241 (336)
T 3g2f_A 162 SDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESV 241 (336)
T ss_dssp CCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCC
T ss_pred eeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccch
Confidence 99999987653221 11223458999999999976 35677899999999999999998887644332
Q ss_pred cccccHHH----------HHHHhhhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccc
Q 006907 514 VQKGMILD----------CVRTLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEP 583 (626)
Q Consensus 514 ~~~~~i~~----------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~ 583 (626)
........ .................. .......++.+.+++.+||+.||++|||++|+++.|+.++.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~ 319 (336)
T 3g2f_A 242 PEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEA--WKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMI 319 (336)
T ss_dssp CCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTT--CCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred hHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcc--cccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHH
Confidence 22111110 000100000000000000 011234677899999999999999999999999999999887
Q ss_pred hhhh
Q 006907 584 VTEE 587 (626)
Q Consensus 584 ~~~~ 587 (626)
+...
T Consensus 320 ~~~~ 323 (336)
T 3g2f_A 320 WERN 323 (336)
T ss_dssp CCC-
T ss_pred HHhc
Confidence 6544
No 139
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=9.2e-41 Score=354.92 Aligned_cols=268 Identities=24% Similarity=0.316 Sum_probs=195.4
Q ss_pred HHhCCCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCC--cccHHHHHHHHHHHHhcc-CCcccceeeeeecCC--c
Q 006907 300 IATGNFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPN--FTGEVQFQTEVEMIGLAL-HRNLLRLYGFCMTPE--E 373 (626)
Q Consensus 300 ~~~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~--~ 373 (626)
...++|.+.+.||+|+||.||+|.. .+++.||||++.... ......+.+|+.+++.+. ||||+++++++...+ .
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~ 85 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD 85 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence 3456899999999999999999985 468899999986543 233456788999999997 999999999997544 6
Q ss_pred eEEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCc
Q 006907 374 RLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLA 453 (626)
Q Consensus 374 ~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a 453 (626)
.++||||++ ++|.+++... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 86 ~~lv~e~~~-~~L~~~~~~~-----~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a 156 (388)
T 3oz6_A 86 VYLVFDYME-TDLHAVIRAN-----ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLS 156 (388)
T ss_dssp EEEEEECCS-EEHHHHHHHT-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEecccC-cCHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCccc
Confidence 799999997 5999999752 489999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCC--------------------CceeeeecccCCccCcccccc-CCCCccchhHHHHHHHHHHHhCCCcCCCCCc
Q 006907 454 KLLDRRD--------------------SHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGVLLLELITGQKALDVGNG 512 (626)
Q Consensus 454 ~~~~~~~--------------------~~~~~~~~gt~~y~aPE~~~~-~~~t~~~DvwSlGvil~elltg~~p~~~~~~ 512 (626)
+...... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+.+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~ 236 (388)
T 3oz6_A 157 RSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSST 236 (388)
T ss_dssp EESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred ccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 8653311 112234569999999999976 6789999999999999999999999987654
Q ss_pred ccccccHHHHHHHhhhcccc-------ccc----------cccccCCCC------------CHHHHHHHHHHHHHccCCC
Q 006907 513 QVQKGMILDCVRTLHEERRL-------DVL----------IDRDLKGSF------------DPTELEKMVQLALQCTQSH 563 (626)
Q Consensus 513 ~~~~~~i~~~~~~~~~~~~~-------~~~----------~~~~l~~~~------------~~~~~~~l~~l~~~cl~~~ 563 (626)
..+...+.........+... ... ........+ ....++++.+|+.+||+.|
T Consensus 237 ~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~d 316 (388)
T 3oz6_A 237 MNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFN 316 (388)
T ss_dssp HHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSS
T ss_pred HHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccC
Confidence 44333333221111100000 000 000000000 0123467899999999999
Q ss_pred CCCCCCHHHHHHH
Q 006907 564 PNLRPKMSEVLKV 576 (626)
Q Consensus 564 P~~RPs~~evl~~ 576 (626)
|++|||++|+++.
T Consensus 317 P~~R~t~~e~l~H 329 (388)
T 3oz6_A 317 PNKRISANDALKH 329 (388)
T ss_dssp GGGSCCHHHHTTS
T ss_pred cccCCCHHHHhCC
Confidence 9999999999985
No 140
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=4.3e-40 Score=334.59 Aligned_cols=253 Identities=21% Similarity=0.287 Sum_probs=199.4
Q ss_pred CCCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCC-cccHHHHHHHHHHHHhccCCcccceeeeeecCCceEEEEee
Q 006907 303 GNFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPN-FTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPY 380 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E~ 380 (626)
++|.+.+.||+|+||.||++.. .++..||+|++.... ......+.+|+++++.++||||+++++++.+....++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 4688899999999999999986 457899999987543 33456789999999999999999999999999999999999
Q ss_pred cCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe---CCCCcEEEeeccCccccC
Q 006907 381 MPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILL---DESFEAVVGDFGLAKLLD 457 (626)
Q Consensus 381 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl---~~~~~~ki~DfG~a~~~~ 457 (626)
+++|+|.+++.........+++..+..++.|++.||.|||+. +|+||||||+||++ +.++.+||+|||++....
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~ 178 (285)
T 3is5_A 102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK 178 (285)
T ss_dssp CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence 999999999976443345699999999999999999999999 99999999999999 456889999999998654
Q ss_pred CCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccccccccc
Q 006907 458 RRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLID 537 (626)
Q Consensus 458 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 537 (626)
... ......||+.|+|||.+. ..++.++||||||+++|||++|+.||....... ..... ..... ....
T Consensus 179 ~~~--~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~----~~~~~---~~~~~-~~~~- 246 (285)
T 3is5_A 179 SDE--HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEE----VQQKA---TYKEP-NYAV- 246 (285)
T ss_dssp ----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHH---HHCCC-CCCC-
T ss_pred Ccc--cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHH----HHhhh---ccCCc-cccc-
Confidence 332 223445899999999985 568999999999999999999999997543211 11111 10000 0000
Q ss_pred cccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 538 RDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 538 ~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
. ....++.+.+++.+||+.||++|||+.|+++.
T Consensus 247 -~-----~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 279 (285)
T 3is5_A 247 -E-----CRPLTPQAVDLLKQMLTKDPERRPSAAQVLHH 279 (285)
T ss_dssp --------CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred -c-----cCcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 00124678899999999999999999999874
No 141
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=6.8e-41 Score=347.77 Aligned_cols=267 Identities=21% Similarity=0.256 Sum_probs=196.5
Q ss_pred HhCCCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCCccc--HHHHHHHHHHHHhccCCcccceeeeeecCCceEEE
Q 006907 301 ATGNFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPNFTG--EVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLV 377 (626)
Q Consensus 301 ~~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv 377 (626)
..++|.+.+.||+|+||+||+|.. .+++.||+|+++...... ...+.+|+++++.++||||+++++++.+....++|
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 111 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI 111 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence 445788999999999999999985 468899999997554322 34577899999999999999999999999999999
Q ss_pred EeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe-----CCCCcEEEeeccC
Q 006907 378 YPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILL-----DESFEAVVGDFGL 452 (626)
Q Consensus 378 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl-----~~~~~~ki~DfG~ 452 (626)
|||+++ +|.+++... ..+++..+..++.|++.||.|||++ +|+||||||+|||+ ++++.+||+|||+
T Consensus 112 ~e~~~~-~L~~~~~~~----~~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~ 183 (329)
T 3gbz_A 112 FEYAEN-DLKKYMDKN----PDVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGL 183 (329)
T ss_dssp EECCSE-EHHHHHHHC----TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTH
T ss_pred EecCCC-CHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCC
Confidence 999974 999999753 2489999999999999999999999 99999999999999 4556699999999
Q ss_pred ccccCCCCCceeeeecccCCccCccccccC-CCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccc
Q 006907 453 AKLLDRRDSHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERR 531 (626)
Q Consensus 453 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~ 531 (626)
+........ ......||+.|+|||++.+. .++.++|||||||++|||++|+.||...........+...........+
T Consensus 184 a~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 262 (329)
T 3gbz_A 184 ARAFGIPIR-QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTW 262 (329)
T ss_dssp HHHHC------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTS
T ss_pred ccccCCccc-ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhh
Confidence 987653322 22334589999999999875 4899999999999999999999999765433222222221111111111
Q ss_pred ccccccccc-------CCC-----CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 532 LDVLIDRDL-------KGS-----FDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 532 ~~~~~~~~l-------~~~-----~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
......+.. ... .+.....++.+++.+||+.||++|||++|+++.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 319 (329)
T 3gbz_A 263 PGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH 319 (329)
T ss_dssp TTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence 000000000 000 001134678999999999999999999999874
No 142
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.4e-41 Score=351.67 Aligned_cols=254 Identities=24% Similarity=0.305 Sum_probs=205.2
Q ss_pred CCCCcCceeccCCCceEEEEEe----CCccEEEEEEecCCCc----ccHHHHHHHHHHHHhc-cCCcccceeeeeecCCc
Q 006907 303 GNFSPKNILGQGGYGVVYKGCL----PNRMVVAVKRLKDPNF----TGEVQFQTEVEMIGLA-LHRNLLRLYGFCMTPEE 373 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~ 373 (626)
++|.+.++||+|+||.||++.. .+++.||||+++.... .....+.+|+++++.+ +||||+++++++.....
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 133 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 133 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence 5688899999999999999986 3688999999875321 2234577899999999 59999999999999999
Q ss_pred eEEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCc
Q 006907 374 RLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLA 453 (626)
Q Consensus 374 ~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a 453 (626)
.++||||+++|+|.+++.... .+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||++
T Consensus 134 ~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a 206 (355)
T 1vzo_A 134 LHLILDYINGGELFTHLSQRE----RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLS 206 (355)
T ss_dssp EEEEECCCCSCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEE
T ss_pred EEEEeecCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCC
Confidence 999999999999999997642 489999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCceeeeecccCCccCccccccC--CCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccc
Q 006907 454 KLLDRRDSHVTTAVRGTVGHIAPEYLSTG--QSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERR 531 (626)
Q Consensus 454 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~ 531 (626)
...............||+.|+|||++.+. .++.++|||||||++|||++|+.||...........+. ......
T Consensus 207 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~---~~~~~~-- 281 (355)
T 1vzo_A 207 KEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEIS---RRILKS-- 281 (355)
T ss_dssp EECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHH---HHHHHC--
T ss_pred eecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHH---HHHhcc--
Confidence 87654333334445699999999999863 47899999999999999999999997544322222221 111110
Q ss_pred cccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHHH
Q 006907 532 LDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRP-----KMSEVLKVL 577 (626)
Q Consensus 532 ~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RP-----s~~evl~~L 577 (626)
...++...+..+.+++.+||+.||++|| +++|+++..
T Consensus 282 ---------~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 282 ---------EPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp ---------CCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred ---------CCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 1122334457789999999999999999 999998854
No 143
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=3.3e-40 Score=333.70 Aligned_cols=247 Identities=19% Similarity=0.269 Sum_probs=204.7
Q ss_pred hCCCCcCceeccCCCceEEEEEeCC-ccEEEEEEecCCCcccHHHHHHHHHHHHhccCCcccceeeeeecCCceEEEEee
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCLPN-RMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPY 380 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E~ 380 (626)
.++|.+.+.||+|+||.||+|.... +..||+|++..........+.+|+++++.++||||+++++++.+....++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL 87 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence 3468889999999999999998654 678999999766555667899999999999999999999999999999999999
Q ss_pred cCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe---CCCCcEEEeeccCccccC
Q 006907 381 MPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILL---DESFEAVVGDFGLAKLLD 457 (626)
Q Consensus 381 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl---~~~~~~ki~DfG~a~~~~ 457 (626)
+++++|.+++... ..+++..+..++.|++.||.|||++ +|+||||||+||++ +.++.+||+|||++....
T Consensus 88 ~~~~~L~~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~ 160 (277)
T 3f3z_A 88 CTGGELFERVVHK----RVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK 160 (277)
T ss_dssp CCSCBHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred cCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccceecc
Confidence 9999999998763 2489999999999999999999999 99999999999999 788999999999998765
Q ss_pred CCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccccccccc
Q 006907 458 RRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLID 537 (626)
Q Consensus 458 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 537 (626)
... ......||+.|+|||.+.+ .++.++||||||+++|||++|+.||........ ........
T Consensus 161 ~~~--~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-------~~~~~~~~------- 223 (277)
T 3f3z_A 161 PGK--MMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEV-------MLKIREGT------- 223 (277)
T ss_dssp TTS--CBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH-------HHHHHHCC-------
T ss_pred Ccc--chhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHH-------HHHHHhCC-------
Confidence 433 2233458999999999865 489999999999999999999999975442211 11111110
Q ss_pred cccCCCCCH----HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 538 RDLKGSFDP----TELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 538 ~~l~~~~~~----~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
...+. ..+..+.+++.+||+.||++|||+.|+++.
T Consensus 224 ----~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 224 ----FTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp ----CCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred ----CCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 01111 234678999999999999999999999873
No 144
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=2.6e-40 Score=362.92 Aligned_cols=256 Identities=23% Similarity=0.316 Sum_probs=209.3
Q ss_pred hCCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCCc---ccHHHHHHHHHHHHhccCCcccceeeeeecCCceEEE
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNF---TGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLV 377 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv 377 (626)
.++|...++||+|+||.||++... +++.||+|+++.... .....+..|+++++.++||||+++++++.+....++|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 356888899999999999999874 589999999964321 2345688999999999999999999999999999999
Q ss_pred EeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccC
Q 006907 378 YPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLD 457 (626)
Q Consensus 378 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~ 457 (626)
|||+++|+|.+++.........+++..+..++.||+.||.|||++ +|+||||||+|||++.++++||+|||++....
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 999999999999986554456799999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccccccccc
Q 006907 458 RRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLID 537 (626)
Q Consensus 458 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 537 (626)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...........+... ....
T Consensus 341 ~~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~---i~~~-------- 408 (543)
T 3c4z_A 341 AGQT-KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQR---VLEQ-------- 408 (543)
T ss_dssp TTCC-CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHH---HHHC--------
T ss_pred CCCc-ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHH---Hhhc--------
Confidence 4332 223446999999999999999999999999999999999999999865422221112111 1110
Q ss_pred cccCCCCCHHHHHHHHHHHHHccCCCCCCCCCH-----HHHHH
Q 006907 538 RDLKGSFDPTELEKMVQLALQCTQSHPNLRPKM-----SEVLK 575 (626)
Q Consensus 538 ~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~-----~evl~ 575 (626)
...++...+..+.+++.+||+.||++||++ +++++
T Consensus 409 ---~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 409 ---AVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp ---CCCCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred ---ccCCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 012233445788999999999999999975 56664
No 145
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=5.2e-41 Score=339.82 Aligned_cols=256 Identities=22% Similarity=0.339 Sum_probs=205.9
Q ss_pred CCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCCcc--cHHHHHHHHHHHHhccCCcccceeeeee--cCCceEEE
Q 006907 303 GNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNFT--GEVQFQTEVEMIGLALHRNLLRLYGFCM--TPEERLLV 377 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~--~~~~~~lv 377 (626)
++|++.+.||+|+||.||++... +++.||+|.+...... ....+.+|++++++++||||+++++++. .....++|
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 85 (279)
T 2w5a_A 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV 85 (279)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEE
T ss_pred hheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEE
Confidence 56888999999999999999864 6889999999765432 3456889999999999999999999874 45678999
Q ss_pred EeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC-----eEecCCCCCcEEeCCCCcEEEeeccC
Q 006907 378 YPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPK-----IIHRDVKAANILLDESFEAVVGDFGL 452 (626)
Q Consensus 378 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~-----ivH~Dlkp~NILl~~~~~~ki~DfG~ 452 (626)
|||+++++|.+++.........+++..+..++.|++.||.|||+. + |+||||||+||++++++.+||+|||+
T Consensus 86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~ 162 (279)
T 2w5a_A 86 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGL 162 (279)
T ss_dssp EECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCCCH
T ss_pred EeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecCch
Confidence 999999999999987555556699999999999999999999998 7 99999999999999999999999999
Q ss_pred ccccCCCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhcccc
Q 006907 453 AKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRL 532 (626)
Q Consensus 453 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~ 532 (626)
+........ ......||+.|+|||.+.+..++.++||||||+++|||++|+.||....... +. ....... .
T Consensus 163 ~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----~~---~~i~~~~-~ 233 (279)
T 2w5a_A 163 ARILNHDTS-FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE----LA---GKIREGK-F 233 (279)
T ss_dssp HHHC---CH-HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HH---HHHHHTC-C
T ss_pred heeeccccc-cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHH----HH---HHHhhcc-c
Confidence 987654322 1223458999999999999899999999999999999999999997543211 11 1111111 1
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhh
Q 006907 533 DVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEV 579 (626)
Q Consensus 533 ~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~ 579 (626)
...+...+.++.+++.+||+.||++|||+.|+++.+..
T Consensus 234 ---------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~ 271 (279)
T 2w5a_A 234 ---------RRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 271 (279)
T ss_dssp ---------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred ---------ccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhh
Confidence 11222345789999999999999999999999987543
No 146
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.4e-40 Score=347.66 Aligned_cols=267 Identities=16% Similarity=0.181 Sum_probs=199.6
Q ss_pred hCCCCcCceeccCCCceEEEEEeC----CccEEEEEEecCCCcc-----------cHHHHHHHHHHHHhccCCcccceee
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCLP----NRMVVAVKRLKDPNFT-----------GEVQFQTEVEMIGLALHRNLLRLYG 366 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~nIv~l~~ 366 (626)
.++|.+.+.||+|+||.||+|... .+..+|+|++...... ....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 356888999999999999999875 5678999998765321 1123567888889999999999999
Q ss_pred eeec----CCceEEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCC
Q 006907 367 FCMT----PEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDES 442 (626)
Q Consensus 367 ~~~~----~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~ 442 (626)
++.. ....++||||+ +++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.+
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~ 187 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG----TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYK 187 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG----BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESS
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccC
Confidence 9987 67889999999 999999997543 589999999999999999999999 99999999999999887
Q ss_pred C--cEEEeeccCccccCCCCCc------eeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCccc
Q 006907 443 F--EAVVGDFGLAKLLDRRDSH------VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQV 514 (626)
Q Consensus 443 ~--~~ki~DfG~a~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~ 514 (626)
+ .+||+|||+++.+...... ......||+.|+|||++.+..++.++||||||+++|||++|+.||.......
T Consensus 188 ~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~ 267 (345)
T 2v62_A 188 NPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDP 267 (345)
T ss_dssp STTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCH
T ss_pred CCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccccccc
Confidence 7 9999999999876432211 1133458999999999999999999999999999999999999996422111
Q ss_pred ccccHHHHHHHhhhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccc
Q 006907 515 QKGMILDCVRTLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEP 583 (626)
Q Consensus 515 ~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~ 583 (626)
. ........... .. ......... ....+.++.+++.+||+.||++|||+++|++.|+.+..+
T Consensus 268 ~--~~~~~~~~~~~-~~-~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~ 329 (345)
T 2v62_A 268 V--AVQTAKTNLLD-EL-PQSVLKWAP---SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGIP 329 (345)
T ss_dssp H--HHHHHHHHHHH-TT-THHHHHHSC---TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCCC
T ss_pred H--HHHHHHHhhcc-cc-cHHHHhhcc---ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCCc
Confidence 1 11111111110 00 000000000 012346799999999999999999999999999986554
No 147
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=3.9e-40 Score=347.09 Aligned_cols=257 Identities=16% Similarity=0.199 Sum_probs=207.8
Q ss_pred HHHhCCCCcCceeccCCCceEEEEE------eCCccEEEEEEecCCCcccHHHHHHHHHHHHhcc---CCcccceeeeee
Q 006907 299 QIATGNFSPKNILGQGGYGVVYKGC------LPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLAL---HRNLLRLYGFCM 369 (626)
Q Consensus 299 ~~~~~~f~~~~~lG~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~nIv~l~~~~~ 369 (626)
+...++|.+.++||+|+||.||+|. ..+++.||+|+++... ..++..|+++++.++ |+||+++++++.
T Consensus 61 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~ 137 (365)
T 3e7e_A 61 QLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHL 137 (365)
T ss_dssp ECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEE
T ss_pred EECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeee
Confidence 3455678899999999999999994 4457889999997543 456777888887776 999999999999
Q ss_pred cCCceEEEEeecCCCChHHHHhhccC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC-------
Q 006907 370 TPEERLLVYPYMPNGSVADCLRDTRQ-AKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDE------- 441 (626)
Q Consensus 370 ~~~~~~lv~E~~~~gsL~~~l~~~~~-~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~------- 441 (626)
..+..++||||+++|+|.+++..... ....+++..+..++.|++.||+|||++ +|+||||||+|||++.
T Consensus 138 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~ 214 (365)
T 3e7e_A 138 FQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDD 214 (365)
T ss_dssp CSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC--
T ss_pred cCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCccc
Confidence 99999999999999999999976432 345699999999999999999999999 9999999999999998
Q ss_pred ----CCcEEEeeccCccccCC-CCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCccccc
Q 006907 442 ----SFEAVVGDFGLAKLLDR-RDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQK 516 (626)
Q Consensus 442 ----~~~~ki~DfG~a~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~ 516 (626)
++.+||+|||+++.+.. ..........||+.|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 215 ~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~- 293 (365)
T 3e7e_A 215 EDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC- 293 (365)
T ss_dssp ----CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE-
T ss_pred cccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCce-
Confidence 89999999999976542 223334456699999999999999999999999999999999999999964322110
Q ss_pred ccHHHHHHHhhhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCC-CCHHHHHHHHhhcccc
Q 006907 517 GMILDCVRTLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLR-PKMSEVLKVLEVLVEP 583 (626)
Q Consensus 517 ~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~R-Ps~~evl~~L~~l~~~ 583 (626)
.......... ..+.+.+++..|++.+|.+| |+++++.+.|++++..
T Consensus 294 ------------------~~~~~~~~~~---~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~ 340 (365)
T 3e7e_A 294 ------------------KPEGLFRRLP---HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ 340 (365)
T ss_dssp ------------------EECSCCTTCS---SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred ------------------eechhccccC---cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence 0001111111 24567788999999999998 5788888888887765
No 148
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=6.6e-41 Score=355.36 Aligned_cols=268 Identities=21% Similarity=0.275 Sum_probs=203.5
Q ss_pred HHHhCCCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCCcccHHHHHHHHHHHHhccCCcccceeeeeecC------
Q 006907 299 QIATGNFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTP------ 371 (626)
Q Consensus 299 ~~~~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~------ 371 (626)
+...++|.+.+.||+|+||.||+|.. .+++.||+|++..... ...+|+++++.++||||+++++++...
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 45667899999999999999999985 5689999999865432 234799999999999999999998543
Q ss_pred --------------------------------CceEEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHH
Q 006907 372 --------------------------------EERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYL 419 (626)
Q Consensus 372 --------------------------------~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yL 419 (626)
...++||||++ |+|.+.+.........+++..+..++.|++.||.||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L 157 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI 157 (383)
T ss_dssp -------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 23789999998 588888876444556799999999999999999999
Q ss_pred HhcCCCCeEecCCCCCcEEeC-CCCcEEEeeccCccccCCCCCceeeeecccCCccCccccccC-CCCccchhHHHHHHH
Q 006907 420 HEQCNPKIIHRDVKAANILLD-ESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGVLL 497 (626)
Q Consensus 420 H~~~~~~ivH~Dlkp~NILl~-~~~~~ki~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~~~DvwSlGvil 497 (626)
|+. +|+||||||+||+++ +++.+||+|||++........ .....||+.|+|||.+.+. .++.++||||+||++
T Consensus 158 H~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il 232 (383)
T 3eb0_A 158 HSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP--SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVF 232 (383)
T ss_dssp HTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC--CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHH
T ss_pred HHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC--CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHH
Confidence 999 999999999999998 688999999999987654332 2334589999999998775 489999999999999
Q ss_pred HHHHhCCCcCCCCCcccccccHHHHHHHhhhcc-----------ccccccccccCCCCCHHHHHHHHHHHHHccCCCCCC
Q 006907 498 LELITGQKALDVGNGQVQKGMILDCVRTLHEER-----------RLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNL 566 (626)
Q Consensus 498 ~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~-----------~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~ 566 (626)
|||++|+.||......+....+.........+. .........+...++...+..+.+|+.+||+.||++
T Consensus 233 ~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~ 312 (383)
T 3eb0_A 233 GELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDL 312 (383)
T ss_dssp HHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGG
T ss_pred HHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhh
Confidence 999999999987654443333332211111100 000000011111123334577999999999999999
Q ss_pred CCCHHHHHHH
Q 006907 567 RPKMSEVLKV 576 (626)
Q Consensus 567 RPs~~evl~~ 576 (626)
|||+.|+++.
T Consensus 313 R~t~~e~l~h 322 (383)
T 3eb0_A 313 RINPYEAMAH 322 (383)
T ss_dssp SCCHHHHHTS
T ss_pred CCCHHHHhcC
Confidence 9999999873
No 149
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1e-40 Score=348.55 Aligned_cols=261 Identities=25% Similarity=0.244 Sum_probs=201.7
Q ss_pred HHHhCCCCcCceeccCCCceEEEEEe-CCccEEEEEEecCC-----CcccHHHHHHHHHHHHhccCCcccceeeeeecCC
Q 006907 299 QIATGNFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDP-----NFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPE 372 (626)
Q Consensus 299 ~~~~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~ 372 (626)
....++|.+.+.||+|+||.||+|.. .++..||+|++... .......+.+|+++++.++||||+++++++.+.+
T Consensus 22 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 101 (345)
T 3hko_A 22 LELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQ 101 (345)
T ss_dssp HHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCC
Confidence 34566799999999999999999986 45788999998643 2233457899999999999999999999999999
Q ss_pred ceEEEEeecCCCChHHHHhhccCC------------------------------------CCCCCHHHHHHHHHHHHHHH
Q 006907 373 ERLLVYPYMPNGSVADCLRDTRQA------------------------------------KPPLDWNRRMHIALGTARGL 416 (626)
Q Consensus 373 ~~~lv~E~~~~gsL~~~l~~~~~~------------------------------------~~~l~~~~~~~i~~~i~~~l 416 (626)
..++||||+++|+|.+++...... ...+++..+..++.|++.||
T Consensus 102 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l 181 (345)
T 3hko_A 102 YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSAL 181 (345)
T ss_dssp EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHH
Confidence 999999999999999998631111 11245778889999999999
Q ss_pred HHHHhcCCCCeEecCCCCCcEEeCCCC--cEEEeeccCccccCCCCCc---eeeeecccCCccCcccccc--CCCCccch
Q 006907 417 LYLHEQCNPKIIHRDVKAANILLDESF--EAVVGDFGLAKLLDRRDSH---VTTAVRGTVGHIAPEYLST--GQSSEKTD 489 (626)
Q Consensus 417 ~yLH~~~~~~ivH~Dlkp~NILl~~~~--~~ki~DfG~a~~~~~~~~~---~~~~~~gt~~y~aPE~~~~--~~~t~~~D 489 (626)
+|||+. +|+||||||+||+++.++ .+||+|||++..+...... ......||+.|+|||.+.+ ..++.++|
T Consensus 182 ~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~D 258 (345)
T 3hko_A 182 HYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCD 258 (345)
T ss_dssp HHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHH
T ss_pred HHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHH
Confidence 999999 999999999999998766 8999999999865432221 2334569999999999975 67899999
Q ss_pred hHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCC
Q 006907 490 VFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPK 569 (626)
Q Consensus 490 vwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs 569 (626)
|||||+++|||++|+.||........ .......... ...+ .....+..+.+++.+||+.||++|||
T Consensus 259 iwslG~il~el~~g~~pf~~~~~~~~-------~~~~~~~~~~--~~~~-----~~~~~~~~~~~li~~~l~~~p~~Rps 324 (345)
T 3hko_A 259 AWSAGVLLHLLLMGAVPFPGVNDADT-------ISQVLNKKLC--FENP-----NYNVLSPLARDLLSNLLNRNVDERFD 324 (345)
T ss_dssp HHHHHHHHHHHHHSSCSSCCSSHHHH-------HHHHHHCCCC--TTSG-----GGGGSCHHHHHHHHHHSCSCTTTSCC
T ss_pred HHHHHHHHHHHHHCCCCCCCCChHHH-------HHHHHhcccc--cCCc-----ccccCCHHHHHHHHHHcCCChhHCCC
Confidence 99999999999999999975442211 1111111000 0000 01123467899999999999999999
Q ss_pred HHHHHHH
Q 006907 570 MSEVLKV 576 (626)
Q Consensus 570 ~~evl~~ 576 (626)
+.|+++.
T Consensus 325 ~~~~l~h 331 (345)
T 3hko_A 325 AMRALQH 331 (345)
T ss_dssp HHHHHHS
T ss_pred HHHHhcC
Confidence 9999884
No 150
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=1.1e-40 Score=345.71 Aligned_cols=259 Identities=27% Similarity=0.440 Sum_probs=207.0
Q ss_pred CCCCcCceeccCCCceEEEEEeC-CccE--EEEEEecCCC-cccHHHHHHHHHHHHhc-cCCcccceeeeeecCCceEEE
Q 006907 303 GNFSPKNILGQGGYGVVYKGCLP-NRMV--VAVKRLKDPN-FTGEVQFQTEVEMIGLA-LHRNLLRLYGFCMTPEERLLV 377 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~--vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv 377 (626)
++|.+.+.||+|+||.||+|... ++.. +|+|.++... ......+.+|+++++++ +||||+++++++.+.+..++|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 56888999999999999999854 4543 5999987543 23345689999999999 899999999999999999999
Q ss_pred EeecCCCChHHHHhhcc------------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcE
Q 006907 378 YPYMPNGSVADCLRDTR------------QAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEA 445 (626)
Q Consensus 378 ~E~~~~gsL~~~l~~~~------------~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ 445 (626)
|||+++|+|.+++.... .....+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVA 181 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCE
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCCeE
Confidence 99999999999997643 2234699999999999999999999999 99999999999999999999
Q ss_pred EEeeccCccccCCCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHh-CCCcCCCCCcccccccHHHHHH
Q 006907 446 VVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNGQVQKGMILDCVR 524 (626)
Q Consensus 446 ki~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~i~~~~~ 524 (626)
||+|||++....... ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... +...
T Consensus 182 kL~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~-------~~~~ 252 (327)
T 1fvr_A 182 KIADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-------ELYE 252 (327)
T ss_dssp EECCTTCEESSCEEC--CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-------HHHH
T ss_pred EEcccCcCccccccc--cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH-------HHHH
Confidence 999999987432211 1222347889999999998889999999999999999998 99999754321 1111
Q ss_pred HhhhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccc
Q 006907 525 TLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEP 583 (626)
Q Consensus 525 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~ 583 (626)
..... .....+...+..+.+++.+||+.||++|||+.|+++.|+.++..
T Consensus 253 ~~~~~----------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 301 (327)
T 1fvr_A 253 KLPQG----------YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 301 (327)
T ss_dssp HGGGT----------CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred HhhcC----------CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 11111 11112233457899999999999999999999999999987765
No 151
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.4e-40 Score=336.58 Aligned_cols=249 Identities=25% Similarity=0.382 Sum_probs=184.1
Q ss_pred CCCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCCc---ccHHHHHHHHHHHHhccCCcccceeeeeecCCceEEEE
Q 006907 303 GNFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPNF---TGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVY 378 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 378 (626)
++|.+.+.||+|+||.||+|.. .+++.||+|++..... .....+.+|+++++.++||||+++++++.+.+..++||
T Consensus 11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (278)
T 3cok_A 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVL 90 (278)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEE
Confidence 4688889999999999999986 5688999999864321 12356889999999999999999999999999999999
Q ss_pred eecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccCC
Q 006907 379 PYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDR 458 (626)
Q Consensus 379 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~ 458 (626)
||+++++|.+++... ...+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||++.....
T Consensus 91 e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~ 164 (278)
T 3cok_A 91 EMCHNGEMNRYLKNR---VKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKM 164 (278)
T ss_dssp ECCTTEEHHHHHHTC---SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred ecCCCCcHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeeccC
Confidence 999999999999753 24589999999999999999999999 999999999999999999999999999987653
Q ss_pred CCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhcccccccccc
Q 006907 459 RDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDR 538 (626)
Q Consensus 459 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 538 (626)
... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||.......... . ....
T Consensus 165 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-------~---------~~~~ 227 (278)
T 3cok_A 165 PHE-KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLN-------K---------VVLA 227 (278)
T ss_dssp ----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC---------------------CCSS
T ss_pred CCC-cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHH-------H---------Hhhc
Confidence 322 2223458999999999998889999999999999999999999997544221100 0 0000
Q ss_pred ccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 539 DLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 539 ~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
. ...+...+.++.+++.+||+.||++|||++|+++.
T Consensus 228 ~--~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 228 D--YEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp C--CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred c--cCCccccCHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence 0 01222345678999999999999999999999874
No 152
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=2e-40 Score=343.81 Aligned_cols=267 Identities=24% Similarity=0.390 Sum_probs=211.2
Q ss_pred hCCCCcCceeccCCCceEEEEEe-----CCccEEEEEEecCCCcccHHHHHHHHHHHHhccCCcccceeeeeecCC--ce
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCL-----PNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPE--ER 374 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~--~~ 374 (626)
.++|.+.+.||+|+||.||++.+ .+++.||+|++..........+.+|+++++.++||||+++++++...+ ..
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 34578889999999999999984 357899999998765555667999999999999999999999987654 77
Q ss_pred EEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCcc
Q 006907 375 LLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAK 454 (626)
Q Consensus 375 ~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~ 454 (626)
++||||+++++|.+++.... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 120 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~~ 193 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQKHK---ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTK 193 (326)
T ss_dssp EEEECCCTTCBHHHHHHHST---TSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred EEEEECCCCCCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcchh
Confidence 99999999999999997642 3589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCce--eeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCccc--------ccccHHHHHH
Q 006907 455 LLDRRDSHV--TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQV--------QKGMILDCVR 524 (626)
Q Consensus 455 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~--------~~~~i~~~~~ 524 (626)
......... .....++..|+|||.+.+..++.++||||||+++|||++|+.|+....... ..........
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (326)
T 2w1i_A 194 VLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 273 (326)
T ss_dssp ECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHH
T ss_pred hccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHH
Confidence 765443321 122346778999999998889999999999999999999999986321100 0000000000
Q ss_pred HhhhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccc
Q 006907 525 TLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEP 583 (626)
Q Consensus 525 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~ 583 (626)
. .+........+...+.++.+++.+||+.||++|||+.|+++.|+.+.+.
T Consensus 274 ~---------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~ 323 (326)
T 2w1i_A 274 E---------LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323 (326)
T ss_dssp H---------HHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred H---------HhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 0 1111111122334557899999999999999999999999999987654
No 153
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=1.8e-40 Score=365.14 Aligned_cols=255 Identities=24% Similarity=0.315 Sum_probs=209.6
Q ss_pred HhCCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCC---cccHHHHHHHHHHHHhccCCcccceeeeeecCCceEE
Q 006907 301 ATGNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPN---FTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLL 376 (626)
Q Consensus 301 ~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 376 (626)
..++|.+.++||+|+||.||+|... +++.||+|++.... ......+.+|+++++.++||||+++++++.+.+..++
T Consensus 182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 261 (576)
T 2acx_A 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL 261 (576)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence 3456888999999999999999864 68999999986432 2234568899999999999999999999999999999
Q ss_pred EEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCcccc
Q 006907 377 VYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL 456 (626)
Q Consensus 377 v~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~ 456 (626)
||||+++|+|.+++.... ...+++..+..++.||+.||.|||++ +|+||||||+|||++.++++||+|||++...
T Consensus 262 VmEy~~gg~L~~~l~~~~--~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~ 336 (576)
T 2acx_A 262 VLTLMNGGDLKFHIYHMG--QAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHV 336 (576)
T ss_dssp EECCCCSCBHHHHHHSSS--SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEcCCCCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceec
Confidence 999999999999997532 33589999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhcccccccc
Q 006907 457 DRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLI 536 (626)
Q Consensus 457 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 536 (626)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...........+.......
T Consensus 337 ~~~~--~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~---------- 404 (576)
T 2acx_A 337 PEGQ--TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV---------- 404 (576)
T ss_dssp CTTC--CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHC----------
T ss_pred ccCc--cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcc----------
Confidence 5432 2233469999999999999889999999999999999999999998654322222222222111
Q ss_pred ccccCCCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 006907 537 DRDLKGSFDPTELEKMVQLALQCTQSHPNLRP-----KMSEVLKV 576 (626)
Q Consensus 537 ~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RP-----s~~evl~~ 576 (626)
...++...+.++.+|+.+||+.||++|| +++|+++.
T Consensus 405 ----~~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 405 ----PEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp ----CCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred ----cccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 1112233457889999999999999999 78888874
No 154
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=6e-40 Score=343.42 Aligned_cols=251 Identities=22% Similarity=0.301 Sum_probs=190.4
Q ss_pred hCCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCCcccHHHHHHHHHHHHhccCCcccceeeeeecCCceEEEEee
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPY 380 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E~ 380 (626)
.+.|.+.+.||+|+||.||+|... +++.||||+++... ....+.+|++++++++||||+++++++.++...++||||
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 129 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLEL 129 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEe
Confidence 457888999999999999999875 47889999997643 345678899999999999999999999999999999999
Q ss_pred cCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC---CCcEEEeeccCccccC
Q 006907 381 MPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDE---SFEAVVGDFGLAKLLD 457 (626)
Q Consensus 381 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~---~~~~ki~DfG~a~~~~ 457 (626)
+++|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++. ++.+||+|||++....
T Consensus 130 ~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~ 202 (349)
T 2w4o_A 130 VTGGELFDRIVEK----GYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVE 202 (349)
T ss_dssp CCSCBHHHHHTTC----SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC------
T ss_pred CCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccccccC
Confidence 9999999999642 3589999999999999999999999 9999999999999975 8899999999998654
Q ss_pred CCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccccccccc
Q 006907 458 RRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLID 537 (626)
Q Consensus 458 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 537 (626)
... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ .. ........
T Consensus 203 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~---~~---~~i~~~~~------ 268 (349)
T 2w4o_A 203 HQV--LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQF---MF---RRILNCEY------ 268 (349)
T ss_dssp ------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHH---HH---HHHHTTCC------
T ss_pred ccc--ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHH---HH---HHHHhCCC------
Confidence 322 22345589999999999999999999999999999999999999975432210 11 11111100
Q ss_pred cccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 538 RDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 538 ~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
..........+..+.+++.+||+.||++|||+.|+++.
T Consensus 269 -~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 269 -YFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp -CCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred -ccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00011112345778999999999999999999999884
No 155
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.1e-40 Score=346.59 Aligned_cols=268 Identities=25% Similarity=0.281 Sum_probs=201.7
Q ss_pred HhCCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCCccc-----HHHHHHHHHHHHhccCCcccceeeeeecCCce
Q 006907 301 ATGNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNFTG-----EVQFQTEVEMIGLALHRNLLRLYGFCMTPEER 374 (626)
Q Consensus 301 ~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-----~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 374 (626)
..++|.+.+.||+|+||.||+|... +++.||+|+++...... ...+.+|+++++.++||||+++++++.+....
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI 87 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence 3567999999999999999999864 58899999987543221 23578999999999999999999999999999
Q ss_pred EEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCcc
Q 006907 375 LLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAK 454 (626)
Q Consensus 375 ~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~ 454 (626)
++||||+++ +|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 88 ~lv~e~~~~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (346)
T 1ua2_A 88 SLVFDFMET-DLEVIIKDN---SLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAK 160 (346)
T ss_dssp EEEEECCSE-EHHHHHTTC---CSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGS
T ss_pred EEEEEcCCC-CHHHHHHhc---CcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccce
Confidence 999999986 899888643 34588899999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCceeeeecccCCccCccccccC-CCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccccc
Q 006907 455 LLDRRDSHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLD 533 (626)
Q Consensus 455 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~ 533 (626)
....... ......||+.|+|||.+.+. .++.++||||||+++|||++|..||...........+...........+..
T Consensus 161 ~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 239 (346)
T 1ua2_A 161 SFGSPNR-AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPD 239 (346)
T ss_dssp TTTSCCC-CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSS
T ss_pred eccCCcc-cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhh
Confidence 7654332 22334589999999999764 489999999999999999999999976553332222222221111111111
Q ss_pred cccccc-----cCCCCC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 534 VLIDRD-----LKGSFD-----PTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 534 ~~~~~~-----l~~~~~-----~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
....+. .....+ ...+..+.+++.+||+.||++|||+.|+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 240 MCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp TTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred hccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 100000 000111 2234789999999999999999999999985
No 156
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=2.6e-40 Score=358.70 Aligned_cols=246 Identities=23% Similarity=0.374 Sum_probs=204.0
Q ss_pred CCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCCc---ccHHHHHHHHHHHHhccCCcccceeeeeecCCceEEEE
Q 006907 303 GNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNF---TGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVY 378 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 378 (626)
++|.+.+.||+|+||.||+|... +++.||||+++.... .....+.+|+++++.++||||+++++++.+.+..++||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 56888999999999999999865 689999999964321 22346889999999999999999999999999999999
Q ss_pred eecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccCC
Q 006907 379 PYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDR 458 (626)
Q Consensus 379 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~ 458 (626)
||+++|+|.+++.. ...+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||++.....
T Consensus 96 E~~~gg~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~ 168 (476)
T 2y94_A 96 EYVSGGELFDYICK----NGRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 168 (476)
T ss_dssp ECCSSEEHHHHTTS----SSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCT
T ss_pred eCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhccc
Confidence 99999999999964 23589999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCceeeeecccCCccCccccccCCC-CccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccccccccc
Q 006907 459 RDSHVTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLID 537 (626)
Q Consensus 459 ~~~~~~~~~~gt~~y~aPE~~~~~~~-t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 537 (626)
.. ......||+.|+|||++.+..+ +.++|||||||++|||++|+.||....... + ........
T Consensus 169 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~----~---~~~i~~~~------- 232 (476)
T 2y94_A 169 GE--FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPT----L---FKKICDGI------- 232 (476)
T ss_dssp TC--CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHH----H---HHHHHTTC-------
T ss_pred cc--cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHH----H---HHHHhcCC-------
Confidence 32 2234469999999999988765 789999999999999999999997543221 1 11111110
Q ss_pred cccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006907 538 RDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLK 575 (626)
Q Consensus 538 ~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 575 (626)
...+...+.++.+++.+||+.||++|||++|+++
T Consensus 233 ----~~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 233 ----FYTPQYLNPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp ----CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ----cCCCccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 0112223467899999999999999999999998
No 157
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.5e-40 Score=336.56 Aligned_cols=252 Identities=25% Similarity=0.362 Sum_probs=200.1
Q ss_pred hCCCCcCceeccCCCceEEEEEeCCccEEEEEEecCCCcccHHHHHHHHHHHHhccCCcccceeeeeecC-CceEEEEee
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTP-EERLLVYPY 380 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-~~~~lv~E~ 380 (626)
.++|.+.+.||+|+||.||+|... ++.||+|+++... ....+.+|+++++.++||||+++++++.+. +..++||||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 96 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 96 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence 456888999999999999999875 7789999997543 345789999999999999999999997654 478999999
Q ss_pred cCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccCCCC
Q 006907 381 MPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRD 460 (626)
Q Consensus 381 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~ 460 (626)
+++++|.+++.... ...+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||++.......
T Consensus 97 ~~~~~L~~~l~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 171 (278)
T 1byg_A 97 MAKGSLVDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ 171 (278)
T ss_dssp CTTEEHHHHHHHHH--HHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC--------
T ss_pred CCCCCHHHHHHhcc--cccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeeccccccccccc
Confidence 99999999997532 12378999999999999999999999 99999999999999999999999999987654321
Q ss_pred CceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHh-CCCcCCCCCcccccccHHHHHHHhhhccccccccccc
Q 006907 461 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDRD 539 (626)
Q Consensus 461 ~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 539 (626)
....+++.|+|||.+.+..++.++||||||+++|||++ |+.||....... +.. .....
T Consensus 172 ----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~----~~~---~~~~~---------- 230 (278)
T 1byg_A 172 ----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD----VVP---RVEKG---------- 230 (278)
T ss_dssp --------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG----HHH---HHTTT----------
T ss_pred ----cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH----HHH---HHhcC----------
Confidence 22347889999999999999999999999999999998 999997543221 111 11111
Q ss_pred cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccc
Q 006907 540 LKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVE 582 (626)
Q Consensus 540 l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~ 582 (626)
.....+...+..+.+++.+||+.||++|||+.|+++.|+.+..
T Consensus 231 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~ 273 (278)
T 1byg_A 231 YKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 273 (278)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHh
Confidence 1112233445789999999999999999999999999988644
No 158
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=3.2e-40 Score=358.23 Aligned_cols=263 Identities=21% Similarity=0.241 Sum_probs=199.3
Q ss_pred hCCCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCC--cccHHHHHHHHHHHHhccCCcccceeeeeecCC------
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPN--FTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPE------ 372 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~------ 372 (626)
.++|++.++||+|+||.||+|.. .+++.||||++.... ......+.+|+.+++.++||||+++++++....
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 45788999999999999999985 458899999997542 223456889999999999999999999996553
Q ss_pred ceEEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccC
Q 006907 373 ERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGL 452 (626)
Q Consensus 373 ~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~ 452 (626)
..++||||+++ +|.+.+.. .+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~------~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~ 210 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 210 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCC
T ss_pred eEEEEEeCCCC-CHHHHHhh------cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEe
Confidence 46999999976 57666642 389999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccc-
Q 006907 453 AKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERR- 531 (626)
Q Consensus 453 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~- 531 (626)
++..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+...+...+.+..+...++..
T Consensus 211 a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~ 288 (464)
T 3ttj_A 211 ARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMK 288 (464)
T ss_dssp C-----C--CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHT
T ss_pred eeecCCC--cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 9876532 2234456999999999999999999999999999999999999999876644443333332221111000
Q ss_pred -c--------------c-----cccccccCCC---CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 532 -L--------------D-----VLIDRDLKGS---FDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 532 -~--------------~-----~~~~~~l~~~---~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
. . .......... .......++.+|+.+||+.||++|||++|+++.
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 289 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp TSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0 0 0000000000 011236789999999999999999999999984
No 159
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=7.1e-40 Score=341.61 Aligned_cols=272 Identities=23% Similarity=0.302 Sum_probs=212.8
Q ss_pred cchHHHHHHhCCCCcCceeccCCCceEEEEEeCCccEEEEEEecCCCcccHHHHHHHHHHHHh--ccCCcccceeeeeec
Q 006907 293 FSFRELQIATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGL--ALHRNLLRLYGFCMT 370 (626)
Q Consensus 293 ~~~~~~~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~nIv~l~~~~~~ 370 (626)
.++.......++|.+.+.||+|+||.||+|.. +++.||||++.. .....+..|.+++.. ++||||+++++++..
T Consensus 32 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~---~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~ 107 (342)
T 1b6c_B 32 LPLLVQRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSS---REERSWFREAEIYQTVMLRHENILGFIAADNK 107 (342)
T ss_dssp SCHHHHHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECG---GGHHHHHHHHHHHHHSCCCCTTBCCEEEEEEC
T ss_pred CceeecccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCc---hhHHHHHHHHHHHHHhhcCCCcEEEEEeeecc
Confidence 34444556677899999999999999999987 478899999864 234567888888887 789999999999988
Q ss_pred CC----ceEEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCeEecCCCCCcEE
Q 006907 371 PE----ERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLH--------EQCNPKIIHRDVKAANIL 438 (626)
Q Consensus 371 ~~----~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH--------~~~~~~ivH~Dlkp~NIL 438 (626)
.. ..++||||+++|+|.+++... .+++..+..++.|++.||.||| +. +|+||||||+||+
T Consensus 108 ~~~~~~~~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIl 179 (342)
T 1b6c_B 108 DNGTWTQLWLVSDYHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNIL 179 (342)
T ss_dssp CCSSCCCEEEEECCCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEE
T ss_pred cCCccceeEEEEeecCCCcHHHHHhcc-----CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEE
Confidence 76 789999999999999999752 4899999999999999999999 66 9999999999999
Q ss_pred eCCCCcEEEeeccCccccCCCCCce---eeeecccCCccCccccccCC------CCccchhHHHHHHHHHHHhC------
Q 006907 439 LDESFEAVVGDFGLAKLLDRRDSHV---TTAVRGTVGHIAPEYLSTGQ------SSEKTDVFGFGVLLLELITG------ 503 (626)
Q Consensus 439 l~~~~~~ki~DfG~a~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~------~t~~~DvwSlGvil~elltg------ 503 (626)
++.++.+||+|||++.......... .....||+.|+|||.+.+.. ++.++||||||+++|||++|
T Consensus 180 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~ 259 (342)
T 1b6c_B 180 VKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGI 259 (342)
T ss_dssp ECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTB
T ss_pred ECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCc
Confidence 9999999999999998765543321 23345899999999997653 34789999999999999999
Q ss_pred ----CCcCCCCCcccccccHHHHHHHhhhccccccccccccCC-CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 006907 504 ----QKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDRDLKG-SFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLE 578 (626)
Q Consensus 504 ----~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~ 578 (626)
+.||........ ....+......... .+.... ....+.+..+.+++.+||+.||++|||+.||++.|+
T Consensus 260 ~~~~~~p~~~~~~~~~--~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 332 (342)
T 1b6c_B 260 HEDYQLPYYDLVPSDP--SVEEMRKVVCEQKL-----RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLS 332 (342)
T ss_dssp CCCCCCTTTTTSCSSC--CHHHHHHHHTTSCC-----CCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHH
T ss_pred ccccccCccccCcCcc--cHHHHHHHHHHHHh-----CCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHH
Confidence 677764332211 11122222111110 011100 012467788999999999999999999999999999
Q ss_pred hcccc
Q 006907 579 VLVEP 583 (626)
Q Consensus 579 ~l~~~ 583 (626)
.+...
T Consensus 333 ~i~~~ 337 (342)
T 1b6c_B 333 QLSQQ 337 (342)
T ss_dssp HHHHT
T ss_pred HHHHH
Confidence 87654
No 160
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=2e-40 Score=352.29 Aligned_cols=250 Identities=20% Similarity=0.305 Sum_probs=197.1
Q ss_pred CCCCcCceeccCCCceEEEEEeCCccEEEEEEecCCCc--ccHHHHHHHHHHHHhcc--CCcccceeeeeecCCceEEEE
Q 006907 303 GNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNF--TGEVQFQTEVEMIGLAL--HRNLLRLYGFCMTPEERLLVY 378 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~--h~nIv~l~~~~~~~~~~~lv~ 378 (626)
..|.+.+.||+|+||.||++...+++.||||++..... .....+.+|+++++.++ ||||+++++++...+..++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 45888999999999999999988899999999975432 23456899999999996 599999999999999999999
Q ss_pred eecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccCC
Q 006907 379 PYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDR 458 (626)
Q Consensus 379 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~ 458 (626)
| +.+++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+|||++ ++.+||+|||++.....
T Consensus 136 E-~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~ 206 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKK----KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQP 206 (390)
T ss_dssp E-CCSEEHHHHHHHC----SSCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC--
T ss_pred e-cCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccccC
Confidence 9 5688999999763 2588999999999999999999999 999999999999996 57999999999987654
Q ss_pred CCCc-eeeeecccCCccCcccccc-----------CCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHh
Q 006907 459 RDSH-VTTAVRGTVGHIAPEYLST-----------GQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTL 526 (626)
Q Consensus 459 ~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~ 526 (626)
.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... . ......
T Consensus 207 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~-----~-~~~~~~ 280 (390)
T 2zmd_A 207 DTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ-----I-SKLHAI 280 (390)
T ss_dssp -------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCH-----H-HHHHHH
T ss_pred CCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHH-----H-HHHHHH
Confidence 3322 2234569999999999965 36899999999999999999999999743211 1 111111
Q ss_pred hhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 527 HEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 527 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
.+......++...+..+.+++.+||+.||++|||+.|+++.
T Consensus 281 ---------~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 281 ---------IDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp ---------HCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ---------hCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 11111111222224678999999999999999999999974
No 161
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.5e-40 Score=344.30 Aligned_cols=242 Identities=22% Similarity=0.287 Sum_probs=202.3
Q ss_pred hCCCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCCcc--------cHHHHHHHHHHHHhccCCcccceeeeeecCC
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPNFT--------GEVQFQTEVEMIGLALHRNLLRLYGFCMTPE 372 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~ 372 (626)
.++|.+.+.||+|+||.||+|.. .+++.||||+++..... ....+.+|+++++.++||||+++++++.+.+
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~ 102 (335)
T 3dls_A 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG 102 (335)
T ss_dssp HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence 45789999999999999999985 56889999999765421 2235778999999999999999999999999
Q ss_pred ceEEEEeecCCC-ChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeecc
Q 006907 373 ERLLVYPYMPNG-SVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFG 451 (626)
Q Consensus 373 ~~~lv~E~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG 451 (626)
..++||||+.+| +|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||
T Consensus 103 ~~~lv~e~~~~g~~l~~~~~~~----~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg 175 (335)
T 3dls_A 103 FFQLVMEKHGSGLDLFAFIDRH----PRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFG 175 (335)
T ss_dssp EEEEEEECCTTSCBHHHHHHTC----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCT
T ss_pred EEEEEEEeCCCCccHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeecc
Confidence 999999999777 999999753 3589999999999999999999999 99999999999999999999999999
Q ss_pred CccccCCCCCceeeeecccCCccCccccccCCC-CccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhcc
Q 006907 452 LAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEER 530 (626)
Q Consensus 452 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~ 530 (626)
++........ .....||+.|+|||++.+..+ +.++||||||+++|||++|+.||.......
T Consensus 176 ~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~---------------- 237 (335)
T 3dls_A 176 SAAYLERGKL--FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETV---------------- 237 (335)
T ss_dssp TCEECCTTCC--BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGT----------------
T ss_pred cceECCCCCc--eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHHH----------------
Confidence 9987654332 234569999999999988776 889999999999999999999996421100
Q ss_pred ccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 531 RLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 531 ~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
. ... ..+...+.++.+++.+||+.||++|||+.|+++.
T Consensus 238 --~----~~~--~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 238 --E----AAI--HPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp --T----TCC--CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred --h----hcc--CCCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 000 0111234678999999999999999999999985
No 162
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=1.9e-40 Score=372.82 Aligned_cols=250 Identities=26% Similarity=0.346 Sum_probs=201.2
Q ss_pred ceeccCCCceEEEEEeC---CccEEEEEEecCCCc--ccHHHHHHHHHHHHhccCCcccceeeeeecCCceEEEEeecCC
Q 006907 309 NILGQGGYGVVYKGCLP---NRMVVAVKRLKDPNF--TGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPYMPN 383 (626)
Q Consensus 309 ~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E~~~~ 383 (626)
+.||+|+||.||+|.+. .++.||||+++.... ....++.+|++++++++|||||++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999653 467899999975432 234679999999999999999999999964 568899999999
Q ss_pred CChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccCCCCCc-
Q 006907 384 GSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSH- 462 (626)
Q Consensus 384 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~~~- 462 (626)
|+|.+++... ..+++..+..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+++........
T Consensus 454 g~L~~~l~~~----~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 526 (635)
T 4fl3_A 454 GPLNKYLQQN----RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 526 (635)
T ss_dssp EEHHHHHHHC----TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-----
T ss_pred CCHHHHHhhC----CCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccc
Confidence 9999999753 3589999999999999999999999 9999999999999999999999999999876543322
Q ss_pred -eeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHh-CCCcCCCCCcccccccHHHHHHHhhhcccccccccccc
Q 006907 463 -VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDRDL 540 (626)
Q Consensus 463 -~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l 540 (626)
......+|+.|+|||++.+..++.++|||||||++|||++ |+.||....... +. ...... .
T Consensus 527 ~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~----~~---~~i~~~----------~ 589 (635)
T 4fl3_A 527 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE----VT---AMLEKG----------E 589 (635)
T ss_dssp --------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH----HH---HHHHTT----------C
T ss_pred ccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH----HH---HHHHcC----------C
Confidence 2223346789999999999999999999999999999998 999997544321 11 111111 1
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccc
Q 006907 541 KGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEP 583 (626)
Q Consensus 541 ~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~ 583 (626)
....+...+.++.+++.+||+.||++|||+++|++.|+++...
T Consensus 590 ~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~ 632 (635)
T 4fl3_A 590 RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD 632 (635)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence 1122334567899999999999999999999999999987654
No 163
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=1.2e-40 Score=350.43 Aligned_cols=275 Identities=21% Similarity=0.247 Sum_probs=203.6
Q ss_pred cchHHHHHHhCCCCcCceeccCCCceEEEEEeCCccEEEEEEecCCCccc-----------HHHHHHHHHHHHhccCCcc
Q 006907 293 FSFRELQIATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTG-----------EVQFQTEVEMIGLALHRNL 361 (626)
Q Consensus 293 ~~~~~~~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~h~nI 361 (626)
....++....++|.+.+.||+|+||.||+|...++..||||++....... ...+.+|+++++.++||||
T Consensus 12 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 91 (362)
T 3pg1_A 12 DLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI 91 (362)
T ss_dssp HHHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred HHHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCc
Confidence 34677888999999999999999999999998889999999986432211 2568999999999999999
Q ss_pred cceeeeeecC-----CceEEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCc
Q 006907 362 LRLYGFCMTP-----EERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAAN 436 (626)
Q Consensus 362 v~l~~~~~~~-----~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~N 436 (626)
+++++++... ...++||||++ |+|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+|
T Consensus 92 v~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~N 164 (362)
T 3pg1_A 92 LGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQ---RIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGN 164 (362)
T ss_dssp CCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCT---TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGG
T ss_pred cceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHH
Confidence 9999998543 35799999997 6888888642 34689999999999999999999999 99999999999
Q ss_pred EEeCCCCcEEEeeccCccccCCCCCceeeeecccCCccCcccccc-CCCCccchhHHHHHHHHHHHhCCCcCCCCCcccc
Q 006907 437 ILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQ 515 (626)
Q Consensus 437 ILl~~~~~~ki~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~ 515 (626)
|+++.++.+||+|||++....... ......||+.|+|||++.+ ..++.++||||||+++|+|++|+.||........
T Consensus 165 Il~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~ 242 (362)
T 3pg1_A 165 ILLADNNDITICDFNLAREDTADA--NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQ 242 (362)
T ss_dssp EEECTTCCEEECCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred EEEcCCCCEEEEecCccccccccc--ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHH
Confidence 999999999999999997543322 2233458999999999977 6789999999999999999999999986553332
Q ss_pred cccHHHHHHHhhhcc-------ccccccccccC-------CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 516 KGMILDCVRTLHEER-------RLDVLIDRDLK-------GSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 516 ~~~i~~~~~~~~~~~-------~~~~~~~~~l~-------~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
...+........... ........... ....+...+.+.+++.+||+.||++|||+.|+++.
T Consensus 243 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 243 LNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 222222111100000 00000000000 00112234678999999999999999999999984
No 164
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=5.6e-40 Score=335.74 Aligned_cols=267 Identities=24% Similarity=0.281 Sum_probs=202.4
Q ss_pred CCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCCcc--cHHHHHHHHHHHHhccCCcccceeeeeecCCceEEEEe
Q 006907 303 GNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNFT--GEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYP 379 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E 379 (626)
++|++.+.||+|+||.||+|... +++.||+|+++..... ....+.+|++++++++||||+++++++.+++..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 46888999999999999999865 6889999998754322 23568899999999999999999999999999999999
Q ss_pred ecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccCCC
Q 006907 380 YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRR 459 (626)
Q Consensus 380 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~ 459 (626)
|++ ++|.+++.... ...+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||++......
T Consensus 83 ~~~-~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 156 (299)
T 2r3i_A 83 FLH-QDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156 (299)
T ss_dssp CCS-EEHHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCC
T ss_pred ccc-CCHHHHHHhhh--ccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccCC
Confidence 997 59999997642 23589999999999999999999999 9999999999999999999999999999876433
Q ss_pred CCceeeeecccCCccCccccccCC-CCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhcccccccccc
Q 006907 460 DSHVTTAVRGTVGHIAPEYLSTGQ-SSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDR 538 (626)
Q Consensus 460 ~~~~~~~~~gt~~y~aPE~~~~~~-~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 538 (626)
.. ......+|+.|+|||.+.+.. ++.++||||||+++|||++|+.||...........+...........+......+
T Consensus 157 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (299)
T 2r3i_A 157 VR-TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 235 (299)
T ss_dssp SB-CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGST
T ss_pred cc-ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCc
Confidence 22 122345899999999998765 7999999999999999999999998654322221111111110000000000000
Q ss_pred ccCCCC-----------CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 539 DLKGSF-----------DPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 539 ~l~~~~-----------~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
.....+ .+..+.++.+++.+||+.||++|||+.|+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~h 284 (299)
T 2r3i_A 236 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 284 (299)
T ss_dssp TCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 000000 01234678999999999999999999999883
No 165
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=2.2e-40 Score=336.24 Aligned_cols=247 Identities=21% Similarity=0.334 Sum_probs=201.4
Q ss_pred hCCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCC--cccHHHHHHHHHHHHhc-cCCcccceeeeeecCCceEEE
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPN--FTGEVQFQTEVEMIGLA-LHRNLLRLYGFCMTPEERLLV 377 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv 377 (626)
.++|.+.+.||+|+||.||+|... +++.||+|+++... .....++.+|+..+..+ +||||+++++++.+++..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 456888999999999999999865 68899999998643 23355688899999988 899999999999999999999
Q ss_pred EeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC----------------
Q 006907 378 YPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDE---------------- 441 (626)
Q Consensus 378 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~---------------- 441 (626)
|||+++++|.+++.........+++..+..++.|++.||.|||++ +|+||||||+||+++.
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC-----------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 999999999999987544345689999999999999999999999 9999999999999984
Q ss_pred ---CCcEEEeeccCccccCCCCCceeeeecccCCccCccccccC-CCCccchhHHHHHHHHHHHhCCCcCCCCCcccccc
Q 006907 442 ---SFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKG 517 (626)
Q Consensus 442 ---~~~~ki~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~ 517 (626)
...+||+|||.+....... ...||+.|+|||.+.+. .++.++||||||+++|||++|.+++.....
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~----- 236 (289)
T 1x8b_A 167 ASNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ----- 236 (289)
T ss_dssp ---CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHH-----
T ss_pred cCCceEEEEcccccccccCCcc-----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhH-----
Confidence 4479999999998765432 22489999999999776 567899999999999999999987643210
Q ss_pred cHHHHHHHhhhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 518 MILDCVRTLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 518 ~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
. ...... . ....+...+..+.+++.+||+.||++|||+.|+++.
T Consensus 237 --~---~~~~~~-~---------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 237 --W---HEIRQG-R---------LPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp --H---HHHHTT-C---------CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred --H---HHHHcC-C---------CCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 0 111111 1 111222344778999999999999999999999875
No 166
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=7.7e-40 Score=332.14 Aligned_cols=252 Identities=21% Similarity=0.294 Sum_probs=204.3
Q ss_pred hCCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCCcc--cHHHHHHHHHHHHhccCCcccceeeeeecCCceEEEE
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNFT--GEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVY 378 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 378 (626)
.++|.+.+.||+|+||.||+|... +++.||+|++...... ....+.+|++++++++||||+++++++.++...++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 467889999999999999999864 5889999998754322 2356889999999999999999999999999999999
Q ss_pred eecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCc---EEEeeccCccc
Q 006907 379 PYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFE---AVVGDFGLAKL 455 (626)
Q Consensus 379 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~---~ki~DfG~a~~ 455 (626)
||+++++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++. +||+|||++..
T Consensus 85 e~~~~~~l~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~ 157 (284)
T 3kk8_A 85 DLVTGGELFEDIVAR----EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 157 (284)
T ss_dssp CCCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred ecCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEE
Confidence 999999999998764 2489999999999999999999999 9999999999999986655 99999999986
Q ss_pred cCCCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccccccc
Q 006907 456 LDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVL 535 (626)
Q Consensus 456 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 535 (626)
...... .....||+.|+|||.+.+..++.++||||||+++|+|++|+.||....... ..... .... ..
T Consensus 158 ~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~----~~~~~---~~~~-~~-- 225 (284)
T 3kk8_A 158 VNDSEA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR----LYAQI---KAGA-YD-- 225 (284)
T ss_dssp CCSSCB--CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHH---HHTC-CC--
T ss_pred cccCcc--ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhH----HHHHH---Hhcc-cc--
Confidence 654322 233558999999999999999999999999999999999999997543221 11111 1110 00
Q ss_pred cccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 536 IDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 536 ~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
.........++.+.+++.+||+.||++|||+.|+++.
T Consensus 226 ----~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 226 ----YPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp ----CCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred ----CCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 0000112234678999999999999999999999884
No 167
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=2e-40 Score=347.50 Aligned_cols=264 Identities=16% Similarity=0.201 Sum_probs=206.1
Q ss_pred CCCCcCceeccCCCceEEEEEeCC---------ccEEEEEEecCCCcccHHHHHHHHHHHHhccCCcccc----------
Q 006907 303 GNFSPKNILGQGGYGVVYKGCLPN---------RMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLR---------- 363 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~---------- 363 (626)
++|.+.+.||+|+||.||+|.... ++.||+|++... ..+.+|++++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 578889999999999999998653 788999998754 36789999999999999998
Q ss_pred -----eeeeeec-CCceEEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcE
Q 006907 364 -----LYGFCMT-PEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANI 437 (626)
Q Consensus 364 -----l~~~~~~-~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NI 437 (626)
+++++.. ....++||||+ +++|.+++.... ...+++..+..++.|++.||.|||++ +|+||||||+||
T Consensus 117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NI 190 (352)
T 2jii_A 117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP--KHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAENI 190 (352)
T ss_dssp CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG--GGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGGE
T ss_pred cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC--cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHE
Confidence 5666665 67789999999 999999998632 24599999999999999999999999 999999999999
Q ss_pred EeCCCC--cEEEeeccCccccCCCCCc------eeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCC
Q 006907 438 LLDESF--EAVVGDFGLAKLLDRRDSH------VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDV 509 (626)
Q Consensus 438 Ll~~~~--~~ki~DfG~a~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~ 509 (626)
+++.++ .+||+|||++..+...... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||..
T Consensus 191 l~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 270 (352)
T 2jii_A 191 FVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTN 270 (352)
T ss_dssp EEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGG
T ss_pred EEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 999988 9999999999876533211 11234689999999999999999999999999999999999999975
Q ss_pred CCcccccccHHHHHHHhhhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccch
Q 006907 510 GNGQVQKGMILDCVRTLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEPV 584 (626)
Q Consensus 510 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~~ 584 (626)
..... ..+.......... .......... ....+..+.+++.+||+.||++|||++|+++.|+.++...
T Consensus 271 ~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~ 338 (352)
T 2jii_A 271 CLPNT--EDIMKQKQKFVDK--PGPFVGPCGH---WIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDL 338 (352)
T ss_dssp GTTCH--HHHHHHHHHHHHS--CCCEECTTSC---EECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred CCcCH--HHHHHHHHhccCC--hhhhhhhccc---cCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhc
Confidence 43111 1122222111111 1111111000 0112377999999999999999999999999999987653
No 168
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=2.7e-40 Score=335.17 Aligned_cols=251 Identities=24% Similarity=0.375 Sum_probs=205.2
Q ss_pred HhCCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCCcccHHHHHHHHHHHHhccCCcccceeeeeec---------
Q 006907 301 ATGNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMT--------- 370 (626)
Q Consensus 301 ~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~--------- 370 (626)
..++|++.+.||+|+||.||+|... +++.||+|+++... ..+.+|+++++.++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 3456888999999999999999875 68899999997543 356789999999999999999998854
Q ss_pred -------CCceEEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCC
Q 006907 371 -------PEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESF 443 (626)
Q Consensus 371 -------~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~ 443 (626)
....++||||+++|+|.+++.... ...+++..+..++.|++.||.|||+. +|+||||||+||++++++
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~ 159 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR--GEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTK 159 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHGG--GSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETT
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCC
Confidence 345789999999999999997643 23589999999999999999999999 999999999999999999
Q ss_pred cEEEeeccCccccCCCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHH
Q 006907 444 EAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCV 523 (626)
Q Consensus 444 ~~ki~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~ 523 (626)
.+||+|||++........ .....||+.|+|||.+.+..++.++||||||+++|||++|..|+.... ...
T Consensus 160 ~~kl~Dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~---------~~~ 228 (284)
T 2a19_B 160 QVKIGDFGLVTSLKNDGK--RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS---------KFF 228 (284)
T ss_dssp EEEECCCTTCEESSCCSC--CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH---------HHH
T ss_pred CEEECcchhheecccccc--ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH---------HHH
Confidence 999999999987654322 233458999999999999999999999999999999999998874210 111
Q ss_pred HHhhhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccch
Q 006907 524 RTLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEPV 584 (626)
Q Consensus 524 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~~ 584 (626)
..... . . .+...+..+.+++.+||+.||++|||+.|+++.|+.+....
T Consensus 229 ~~~~~-~--------~----~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~ 276 (284)
T 2a19_B 229 TDLRD-G--------I----ISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSP 276 (284)
T ss_dssp HHHHT-T--------C----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC--
T ss_pred HHhhc-c--------c----ccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCC
Confidence 11111 0 1 11122356889999999999999999999999999876653
No 169
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=3e-40 Score=345.46 Aligned_cols=245 Identities=30% Similarity=0.396 Sum_probs=200.0
Q ss_pred CCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCCccc---HHHHHHHHHHHHhccCCcccceeeeeecCCceEEEEe
Q 006907 304 NFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPNFTG---EVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYP 379 (626)
Q Consensus 304 ~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E 379 (626)
.|...+.||+|+||.||+|.. .+++.||||++....... ...+.+|+++++.++||||+++++++.+++..++|||
T Consensus 55 ~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 134 (348)
T 1u5q_A 55 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME 134 (348)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred heeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEe
Confidence 477889999999999999985 578899999997543322 2468899999999999999999999999999999999
Q ss_pred ecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccCCC
Q 006907 380 YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRR 459 (626)
Q Consensus 380 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~ 459 (626)
|++ |+|.+++.... ..+++..+..++.|++.||.|||++ +|+||||||+|||+++++.+||+|||++......
T Consensus 135 ~~~-g~l~~~l~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~ 207 (348)
T 1u5q_A 135 YCL-GSASDLLEVHK---KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA 207 (348)
T ss_dssp CCS-EEHHHHHHHHT---SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB
T ss_pred cCC-CCHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCCC
Confidence 997 68888886432 3589999999999999999999999 9999999999999999999999999999865432
Q ss_pred CCceeeeecccCCccCccccc---cCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhcccccccc
Q 006907 460 DSHVTTAVRGTVGHIAPEYLS---TGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLI 536 (626)
Q Consensus 460 ~~~~~~~~~gt~~y~aPE~~~---~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 536 (626)
....||+.|+|||++. +..++.++|||||||++|||++|+.||....... ...........
T Consensus 208 -----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~-------~~~~~~~~~~~---- 271 (348)
T 1u5q_A 208 -----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-------ALYHIAQNESP---- 271 (348)
T ss_dssp -----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-------HHHHHHHSCCC----
T ss_pred -----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-------HHHHHHhcCCC----
Confidence 2345899999999984 5678999999999999999999999997543211 11111111110
Q ss_pred ccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 537 DRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 537 ~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
.. .+...+..+.+++.+||+.||++|||++|+++.
T Consensus 272 --~~---~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 272 --AL---QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp --CC---CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred --CC---CCCCCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 00 112234678899999999999999999999874
No 170
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=1.3e-39 Score=346.96 Aligned_cols=251 Identities=21% Similarity=0.263 Sum_probs=192.5
Q ss_pred CCCcC-ceeccCCCceEEEEEeC-CccEEEEEEecCCCcccHHHHHHHHHHHH-hccCCcccceeeeeec----CCceEE
Q 006907 304 NFSPK-NILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNFTGEVQFQTEVEMIG-LALHRNLLRLYGFCMT----PEERLL 376 (626)
Q Consensus 304 ~f~~~-~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~-~l~h~nIv~l~~~~~~----~~~~~l 376 (626)
+|.+. ++||+|+||+||++... +++.||||+++. ...+.+|++++. ..+||||+++++++.. ....++
T Consensus 62 ~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~l 136 (400)
T 1nxk_A 62 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI 136 (400)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred cceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEE
Confidence 45554 68999999999999864 588999999864 235678888874 4589999999998865 556899
Q ss_pred EEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC---CCcEEEeeccCc
Q 006907 377 VYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDE---SFEAVVGDFGLA 453 (626)
Q Consensus 377 v~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~---~~~~ki~DfG~a 453 (626)
||||+++|+|.+++... ....+++..+..++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||++
T Consensus 137 v~E~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a 211 (400)
T 1nxk_A 137 VMECLDGGELFSRIQDR--GDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFA 211 (400)
T ss_dssp EEECCCSEEHHHHHHCC-----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEeCCCCcHHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEecccc
Confidence 99999999999999753 234599999999999999999999999 9999999999999997 789999999999
Q ss_pred cccCCCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccccc
Q 006907 454 KLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLD 533 (626)
Q Consensus 454 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~ 533 (626)
....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...............+... ...
T Consensus 212 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~----~~~ 285 (400)
T 1nxk_A 212 KETTSHN--SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG----QYE 285 (400)
T ss_dssp EECC-------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHT----CCC
T ss_pred cccCCCC--ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcC----ccc
Confidence 8654322 2234568999999999999999999999999999999999999998655433222222221110 000
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 534 VLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 534 ~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
.........+.++.+|+.+||+.||++|||+.|+++.
T Consensus 286 ------~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 286 ------FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp ------CCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ------CCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0000012345778999999999999999999999984
No 171
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=1.8e-39 Score=335.75 Aligned_cols=252 Identities=21% Similarity=0.276 Sum_probs=205.3
Q ss_pred hCCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCCcc------cHHHHHHHHHHHHhccCCcccceeeeeecCCce
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNFT------GEVQFQTEVEMIGLALHRNLLRLYGFCMTPEER 374 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 374 (626)
.++|.+.+.||+|+||.||+|... +++.||+|+++..... ....+.+|+.+++.++||||+++++++.+....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 346888999999999999999864 5889999998754322 356789999999999999999999999999999
Q ss_pred EEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCC----cEEEeec
Q 006907 375 LLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESF----EAVVGDF 450 (626)
Q Consensus 375 ~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~----~~ki~Df 450 (626)
++||||+++++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++ .+||+||
T Consensus 91 ~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Df 163 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQK----ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (321)
T ss_dssp EEEECCCCSCBHHHHHHTC----SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred EEEEEcCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccC
Confidence 9999999999999999752 3589999999999999999999999 999999999999999887 7999999
Q ss_pred cCccccCCCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhcc
Q 006907 451 GLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEER 530 (626)
Q Consensus 451 G~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~ 530 (626)
|++........ .....||+.|+|||.+.+..++.++||||||+++|+|++|+.||....... .........
T Consensus 164 g~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-------~~~~i~~~~ 234 (321)
T 2a2a_A 164 GLAHEIEDGVE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE-------TLANITSVS 234 (321)
T ss_dssp TTCEECCTTCC--CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH-------HHHHHHTTC
T ss_pred ccceecCcccc--ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHH-------HHHHHHhcc
Confidence 99987654322 233458999999999999999999999999999999999999997543221 111111100
Q ss_pred ccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 531 RLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 531 ~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
...++... ...+..+.+++.+||+.||++|||+.|+++.
T Consensus 235 ---~~~~~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 235 ---YDFDEEFF----SHTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp ---CCCCHHHH----TTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred ---cccChhhh----cccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00000000 1224678999999999999999999999984
No 172
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=2.9e-40 Score=344.62 Aligned_cols=252 Identities=23% Similarity=0.322 Sum_probs=200.7
Q ss_pred hCCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCCcccHHHHHHHHHHHHhc-cCCcccceeeeeecCCceEEEEe
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNFTGEVQFQTEVEMIGLA-LHRNLLRLYGFCMTPEERLLVYP 379 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv~E 379 (626)
.++|.+.+.||+|+||.||++... +++.||+|+++.... ...+|++++.++ +||||+++++++.++...++|||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E 96 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE 96 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEe
Confidence 456889999999999999999864 588999999976542 235688888877 79999999999999999999999
Q ss_pred ecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCC----CcEEEeeccCccc
Q 006907 380 YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDES----FEAVVGDFGLAKL 455 (626)
Q Consensus 380 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~----~~~ki~DfG~a~~ 455 (626)
|+++|+|.+++... ..+++..+..++.|++.||.|||++ +|+||||||+|||+.++ +.+||+|||++..
T Consensus 97 ~~~gg~L~~~i~~~----~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~ 169 (342)
T 2qr7_A 97 LMKGGELLDKILRQ----KFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQ 169 (342)
T ss_dssp CCCSCBHHHHHHTC----TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTCEE
T ss_pred CCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCccc
Confidence 99999999999753 3589999999999999999999999 99999999999998533 3599999999987
Q ss_pred cCCCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccccccc
Q 006907 456 LDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVL 535 (626)
Q Consensus 456 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 535 (626)
...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ...+... ..... .
T Consensus 170 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-~~~~~~~---i~~~~-~--- 240 (342)
T 2qr7_A 170 LRAENG-LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDT-PEEILAR---IGSGK-F--- 240 (342)
T ss_dssp CBCTTC-CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSC-HHHHHHH---HHHCC-C---
T ss_pred CcCCCC-ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCC-HHHHHHH---HccCC-c---
Confidence 654332 2234468999999999988889999999999999999999999997543221 1112111 11111 0
Q ss_pred cccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 536 IDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 536 ~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
..........+.++.+++.+||+.||++|||+.|+++.
T Consensus 241 ---~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 241 ---SLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp ---CCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred ---ccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 01111123345788999999999999999999999873
No 173
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=2.4e-39 Score=333.90 Aligned_cols=256 Identities=21% Similarity=0.241 Sum_probs=198.5
Q ss_pred CCCCcC-ceeccCCCceEEEEEe-CCccEEEEEEecCCCcccHHHHHHHHHHHHhc-cCCcccceeeeeecCCceEEEEe
Q 006907 303 GNFSPK-NILGQGGYGVVYKGCL-PNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLA-LHRNLLRLYGFCMTPEERLLVYP 379 (626)
Q Consensus 303 ~~f~~~-~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv~E 379 (626)
+.|.+. ++||+|+||.||+|.. .+++.||||+++.........+.+|++++.++ +||||+++++++.+.+..++|||
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 91 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE 91 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence 456664 7899999999999985 46889999999876555567889999999885 79999999999999999999999
Q ss_pred ecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCc---EEEeeccCcccc
Q 006907 380 YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFE---AVVGDFGLAKLL 456 (626)
Q Consensus 380 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~---~ki~DfG~a~~~ 456 (626)
|+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++. +||+|||++...
T Consensus 92 ~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~ 164 (316)
T 2ac3_A 92 KMRGGSILSHIHKRR----HFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGI 164 (316)
T ss_dssp CCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC--
T ss_pred cCCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCcccc
Confidence 999999999997642 489999999999999999999999 9999999999999998766 999999998765
Q ss_pred CCCCC------ceeeeecccCCccCcccccc-----CCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccH------
Q 006907 457 DRRDS------HVTTAVRGTVGHIAPEYLST-----GQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMI------ 519 (626)
Q Consensus 457 ~~~~~------~~~~~~~gt~~y~aPE~~~~-----~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i------ 519 (626)
..... .......||+.|+|||++.+ ..++.++||||||+++|||++|+.||............
T Consensus 165 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 244 (316)
T 2ac3_A 165 KLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPA 244 (316)
T ss_dssp -----------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHH
T ss_pred ccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchh
Confidence 42211 11123458999999999975 45789999999999999999999999865432211000
Q ss_pred --HHHHHHhhhccccccccccccCCCCCH----HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 520 --LDCVRTLHEERRLDVLIDRDLKGSFDP----TELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 520 --~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
......... .. ..++. ..+..+.+++.+||+.||++|||++|+++.
T Consensus 245 ~~~~~~~~i~~-~~----------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 245 CQNMLFESIQE-GK----------YEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp HHHHHHHHHHH-CC----------CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHHHHhc-cC----------cccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 000111110 00 01121 134678999999999999999999999885
No 174
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=3.8e-40 Score=341.77 Aligned_cols=263 Identities=29% Similarity=0.423 Sum_probs=207.1
Q ss_pred HhCCCCcCceeccCCCceEEEEEeC------CccEEEEEEecCCC-cccHHHHHHHHHHHHhccCCcccceeeeeecCCc
Q 006907 301 ATGNFSPKNILGQGGYGVVYKGCLP------NRMVVAVKRLKDPN-FTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEE 373 (626)
Q Consensus 301 ~~~~f~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 373 (626)
..++|.+.+.||+|+||.||+|.+. ++..||||++.... .....++.+|+.++++++||||+++++++.+...
T Consensus 28 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 107 (327)
T 2yfx_A 28 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 107 (327)
T ss_dssp CGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred ChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCC
Confidence 3457889999999999999999842 46789999997543 2344578899999999999999999999999999
Q ss_pred eEEEEeecCCCChHHHHhhccC---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC---CCcEEE
Q 006907 374 RLLVYPYMPNGSVADCLRDTRQ---AKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDE---SFEAVV 447 (626)
Q Consensus 374 ~~lv~E~~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~---~~~~ki 447 (626)
.++||||+++|+|.+++..... ....+++..+..++.|++.||.|||+. +|+||||||+||+++. +..+||
T Consensus 108 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~kl 184 (327)
T 2yfx_A 108 RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKI 184 (327)
T ss_dssp CEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred cEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEEE
Confidence 9999999999999999986432 124589999999999999999999999 9999999999999984 456999
Q ss_pred eeccCccccCCCCC-ceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHh-CCCcCCCCCcccccccHHHHHHH
Q 006907 448 GDFGLAKLLDRRDS-HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNGQVQKGMILDCVRT 525 (626)
Q Consensus 448 ~DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~i~~~~~~ 525 (626)
+|||++........ .......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||...... .+...
T Consensus 185 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~----~~~~~--- 257 (327)
T 2yfx_A 185 GDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ----EVLEF--- 257 (327)
T ss_dssp CCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH----HHHHH---
T ss_pred CccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH----HHHHH---
Confidence 99999876543222 12233457899999999999999999999999999999998 99999754321 11111
Q ss_pred hhhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccc
Q 006907 526 LHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEP 583 (626)
Q Consensus 526 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~ 583 (626)
...... ...+...+..+.+++.+||+.||++|||+.|+++.|+.+...
T Consensus 258 ~~~~~~----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~ 305 (327)
T 2yfx_A 258 VTSGGR----------MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 305 (327)
T ss_dssp HHTTCC----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HhcCCC----------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcC
Confidence 111111 112233456789999999999999999999999999987554
No 175
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=1.4e-40 Score=345.63 Aligned_cols=266 Identities=24% Similarity=0.354 Sum_probs=201.5
Q ss_pred CCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCCccc--HHHHHHHHHHHHhccCCcccceeeeeecCCceEEEEe
Q 006907 303 GNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNFTG--EVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYP 379 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E 379 (626)
++|.+.+.||+|+||.||+|... +++.||+|++....... ...+.+|+++++.++||||+++++++.+....++|||
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 104 (331)
T 4aaa_A 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE 104 (331)
T ss_dssp GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence 35788899999999999999865 48899999987554332 3457889999999999999999999999999999999
Q ss_pred ecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccCCC
Q 006907 380 YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRR 459 (626)
Q Consensus 380 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~ 459 (626)
|+++++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 105 ~~~~~~l~~~~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 177 (331)
T 4aaa_A 105 FVDHTILDDLELFP----NGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP 177 (331)
T ss_dssp CCSEEHHHHHHHST----TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC------
T ss_pred cCCcchHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecCC
Confidence 99999998886532 3489999999999999999999999 9999999999999999999999999999865443
Q ss_pred CCceeeeecccCCccCccccccC-CCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHH--------hhhcc
Q 006907 460 DSHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT--------LHEER 530 (626)
Q Consensus 460 ~~~~~~~~~gt~~y~aPE~~~~~-~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~--------~~~~~ 530 (626)
.. ......||+.|+|||.+.+. .++.++||||||+++|||++|+.||...........+...... .....
T Consensus 178 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (331)
T 4aaa_A 178 GE-VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNP 256 (331)
T ss_dssp -------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCG
T ss_pred cc-ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcc
Confidence 22 22334589999999999875 6899999999999999999999999865543322222211110 00111
Q ss_pred ccccccccccCCCCC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 531 RLDVLIDRDLKGSFD-----PTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 531 ~~~~~~~~~l~~~~~-----~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
.......+......+ +..+..+.+++.+||+.||++|||++|+++.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 257 VFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp GGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 111111111111111 1235789999999999999999999999883
No 176
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.2e-40 Score=347.83 Aligned_cols=261 Identities=25% Similarity=0.316 Sum_probs=198.4
Q ss_pred hCCCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCCcc--cHHHHHHHHHHHHhccCCcccceeeeeecCC------
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPNFT--GEVQFQTEVEMIGLALHRNLLRLYGFCMTPE------ 372 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~------ 372 (626)
.++|.+.+.||+|+||.||+|.. .+++.||||++...... ....+.+|+++++.++||||+++++++....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 35688899999999999999986 46889999999654322 2356889999999999999999999997653
Q ss_pred ceEEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccC
Q 006907 373 ERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGL 452 (626)
Q Consensus 373 ~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~ 452 (626)
..++||||+ +++|.+++.. ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 174 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKH-----EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGL 174 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred eEEEEEecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeec
Confidence 459999999 7899999975 2489999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCceeeeecccCCccCcccccc-CCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhcc-
Q 006907 453 AKLLDRRDSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEER- 530 (626)
Q Consensus 453 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~- 530 (626)
++..... .....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.+...+...+.........+.
T Consensus 175 a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~ 250 (367)
T 1cm8_A 175 ARQADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFV 250 (367)
T ss_dssp CEECCSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHH
T ss_pred ccccccc----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHH
Confidence 9875432 233458999999999977 6799999999999999999999999986654433333322211110000
Q ss_pred -------------ccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 531 -------------RLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 531 -------------~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
.........+. ......+..+.+|+.+||+.||++|||++|+++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 251 QRLQSDEAKNYMKGLPELEKKDFA-SILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp HTCSCHHHHHHHHHSCCCCCCCGG-GTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHhhhHHHHHHHHhCCCCCCCCHH-HHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 00000000000 1112345778999999999999999999999984
No 177
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=1.6e-39 Score=331.58 Aligned_cols=253 Identities=22% Similarity=0.354 Sum_probs=200.9
Q ss_pred CCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCCcccHHHHHHHHHHHHhccCCcccceeeeeecCCceEEEEeecC
Q 006907 304 NFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPYMP 382 (626)
Q Consensus 304 ~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E~~~ 382 (626)
+|....+||+|+||.||+|.. .++..||+|.++.........+.+|+.+++.++||||+++++++.+.+..++||||++
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 102 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP 102 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence 345567999999999999985 4578999999987655556678999999999999999999999999999999999999
Q ss_pred CCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC-CCcEEEeeccCccccCCCCC
Q 006907 383 NGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDE-SFEAVVGDFGLAKLLDRRDS 461 (626)
Q Consensus 383 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~-~~~~ki~DfG~a~~~~~~~~ 461 (626)
+++|.+++.... ....+++..+..++.|++.||.|||+. +|+||||||+||+++. ++.+||+|||++........
T Consensus 103 ~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~ 178 (295)
T 2clq_A 103 GGSLSALLRSKW-GPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP 178 (295)
T ss_dssp EEEHHHHHHHTT-CCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC---
T ss_pred CCCHHHHHHhhc-cCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCCCC
Confidence 999999997642 234578999999999999999999999 9999999999999987 89999999999987643222
Q ss_pred ceeeeecccCCccCccccccCC--CCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccccccccccc
Q 006907 462 HVTTAVRGTVGHIAPEYLSTGQ--SSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDRD 539 (626)
Q Consensus 462 ~~~~~~~gt~~y~aPE~~~~~~--~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 539 (626)
......||+.|+|||++.+.. ++.++||||||+++|||++|+.||........ ........ .
T Consensus 179 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-----~~~~~~~~----------~ 242 (295)
T 2clq_A 179 -CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQA-----AMFKVGMF----------K 242 (295)
T ss_dssp ---CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHH-----HHHHHHHH----------C
T ss_pred -cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhH-----HHHhhccc----------c
Confidence 223345899999999997653 88999999999999999999999964321110 00000000 0
Q ss_pred cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 540 LKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 540 l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
.....+...+.++.+++.+||+.||++|||+.|+++.
T Consensus 243 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 243 VHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp CCCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred ccccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1112233445788999999999999999999999874
No 178
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=8.5e-40 Score=335.50 Aligned_cols=251 Identities=21% Similarity=0.327 Sum_probs=203.0
Q ss_pred hCCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCCcccHHHHHHHHHHHHhccCCcccceeeeeecCCceEEEEee
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPY 380 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E~ 380 (626)
.++|.+.+.||+|+||.||++... +++.||+|+++.........+.+|+++++.++||||+++++++.+....++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL 87 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence 346888999999999999999864 6889999999865544556789999999999999999999999999999999999
Q ss_pred cCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe---CCCCcEEEeeccCccccC
Q 006907 381 MPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILL---DESFEAVVGDFGLAKLLD 457 (626)
Q Consensus 381 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl---~~~~~~ki~DfG~a~~~~ 457 (626)
+++++|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||++ ++++.+||+|||++....
T Consensus 88 ~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~ 160 (304)
T 2jam_A 88 VSGGELFDRILERG----VYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQ 160 (304)
T ss_dssp CCSCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCC
T ss_pred CCCccHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcceecC
Confidence 99999999997542 489999999999999999999999 99999999999999 788999999999987543
Q ss_pred CCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccccccccc
Q 006907 458 RRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLID 537 (626)
Q Consensus 458 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 537 (626)
.. ......||+.|+|||.+.+..++.++||||||+++|||++|+.||....... +. ....... .
T Consensus 161 ~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~---~~i~~~~-~----- 224 (304)
T 2jam_A 161 NG---IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESK----LF---EKIKEGY-Y----- 224 (304)
T ss_dssp CB---TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHH----HH---HHHHHCC-C-----
T ss_pred CC---ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH----HH---HHHHcCC-C-----
Confidence 22 1223458999999999999999999999999999999999999997543211 11 1111110 0
Q ss_pred cccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 538 RDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 538 ~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
..........+..+.+++.+||+.||++|||+.|+++.
T Consensus 225 -~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 225 -EFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp -CCCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred -CCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 00111122345789999999999999999999999873
No 179
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=5.9e-41 Score=354.98 Aligned_cols=243 Identities=13% Similarity=0.111 Sum_probs=189.8
Q ss_pred hCCCCcCceeccCCCceEEEEEe-CCccEEEEEEecCC---CcccHHHHHHHH---HHHHhccCCccccee-------ee
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDP---NFTGEVQFQTEV---EMIGLALHRNLLRLY-------GF 367 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~---~~l~~l~h~nIv~l~-------~~ 367 (626)
.++|.+.+.||+|+||.||+|.. .+++.||||++... .......+.+|+ +.++.++|||||+++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 45688889999999999999985 56899999999743 223346788999 455566799999998 55
Q ss_pred eecCC-----------------ceEEEEeecCCCChHHHHhhccCC---CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 006907 368 CMTPE-----------------ERLLVYPYMPNGSVADCLRDTRQA---KPPLDWNRRMHIALGTARGLLYLHEQCNPKI 427 (626)
Q Consensus 368 ~~~~~-----------------~~~lv~E~~~~gsL~~~l~~~~~~---~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~i 427 (626)
+.+++ ..++||||+ +|+|.+++...... ...+++..+..++.|++.||+|||++ +|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 55443 278999999 68999999864211 12345688899999999999999999 99
Q ss_pred EecCCCCCcEEeCCCCcEEEeeccCccccCCCCCceeeeecccCCccCccccccC-----------CCCccchhHHHHHH
Q 006907 428 IHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTG-----------QSSEKTDVFGFGVL 496 (626)
Q Consensus 428 vH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~t~~~DvwSlGvi 496 (626)
+||||||+|||++.++.+||+|||++..... ......| +.|+|||++.+. .++.++|||||||+
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~i 302 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLV 302 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHH
Confidence 9999999999999999999999999985332 3334457 999999999887 89999999999999
Q ss_pred HHHHHhCCCcCCCCCcccccccHHHHHHHhhhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006907 497 LLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLK 575 (626)
Q Consensus 497 l~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 575 (626)
+|||++|+.||...........+ .. . ....+..+.+++.+||+.||++|||+.|+++
T Consensus 303 l~elltg~~Pf~~~~~~~~~~~~----------------~~-~-----~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 303 IYWIWCADLPITKDAALGGSEWI----------------FR-S-----CKNIPQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp HHHHHHSSCCC------CCSGGG----------------GS-S-----CCCCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred HHHHHHCCCCCcccccccchhhh----------------hh-h-----ccCCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 99999999999754322211110 00 0 0122467899999999999999999999987
No 180
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=9.5e-40 Score=342.21 Aligned_cols=266 Identities=23% Similarity=0.293 Sum_probs=202.8
Q ss_pred CCCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCCcc--cHHHHHHHHHHHHhccCCcccceeeeeecC--------
Q 006907 303 GNFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPNFT--GEVQFQTEVEMIGLALHRNLLRLYGFCMTP-------- 371 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-------- 371 (626)
++|.+.+.||+|+||.||+|.. .+++.||+|++...... ....+.+|+++++.++||||+++++++...
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 4688899999999999999986 56889999998654322 244678999999999999999999999774
Q ss_pred CceEEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeecc
Q 006907 372 EERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFG 451 (626)
Q Consensus 372 ~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG 451 (626)
+..++||||+++ +|.+.+... ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||
T Consensus 97 ~~~~lv~e~~~~-~l~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg 169 (351)
T 3mi9_A 97 GSIYLVFDFCEH-DLAGLLSNV---LVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFG 169 (351)
T ss_dssp CEEEEEEECCSE-EHHHHHHCT---TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred ceEEEEEeccCC-CHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccch
Confidence 457999999975 788777643 23599999999999999999999999 99999999999999999999999999
Q ss_pred CccccCCCCC---ceeeeecccCCccCcccccc-CCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhh
Q 006907 452 LAKLLDRRDS---HVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLH 527 (626)
Q Consensus 452 ~a~~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~ 527 (626)
++........ .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...........+........
T Consensus 170 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~ 249 (351)
T 3mi9_A 170 LARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT 249 (351)
T ss_dssp TCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred hcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Confidence 9987653221 12234458999999999976 4589999999999999999999999986554333322222222111
Q ss_pred hccccccccccc----c---C-CCCC-HH------HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 528 EERRLDVLIDRD----L---K-GSFD-PT------ELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 528 ~~~~~~~~~~~~----l---~-~~~~-~~------~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
...+.. ..... . . .... .+ ..+.+.+|+.+||+.||++|||++|+++.
T Consensus 250 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 250 PEVWPN-VDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp TTTSTT-GGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhhccc-cccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 111100 00000 0 0 0000 01 13568899999999999999999999985
No 181
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=6.7e-40 Score=334.51 Aligned_cols=248 Identities=22% Similarity=0.336 Sum_probs=204.7
Q ss_pred CCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCCc---ccHHHHHHHHHHHHhccCCcccceeeeeecCCceEEEE
Q 006907 303 GNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNF---TGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVY 378 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 378 (626)
++|.+.+.||+|+||.||++... +++.||+|++..... .....+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 94 (294)
T 2rku_A 15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 94 (294)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEE
Confidence 46788899999999999999865 478899999865432 23456888999999999999999999999999999999
Q ss_pred eecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccCC
Q 006907 379 PYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDR 458 (626)
Q Consensus 379 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~ 458 (626)
||+++++|.+++... ..+++..+..++.|++.||.|||++ +|+||||||+||++++++.+||+|||++.....
T Consensus 95 e~~~~~~L~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 167 (294)
T 2rku_A 95 ELCRRRSLLELHKRR----KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY 167 (294)
T ss_dssp ECCTTCBHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred ecCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceeccc
Confidence 999999999998753 2589999999999999999999999 999999999999999999999999999987653
Q ss_pred CCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhcccccccccc
Q 006907 459 RDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDR 538 (626)
Q Consensus 459 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 538 (626)
... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||....... .........
T Consensus 168 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-------~~~~~~~~~-------- 231 (294)
T 2rku_A 168 DGE-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE-------TYLRIKKNE-------- 231 (294)
T ss_dssp TTC-CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-------HHHHHHTTC--------
T ss_pred Ccc-ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-------HHHHHhhcc--------
Confidence 322 2233458999999999998889999999999999999999999997543211 111111110
Q ss_pred ccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 539 DLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 539 ~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
...+...+..+.+++.+||+.||++|||++|+++.
T Consensus 232 ---~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 232 ---YSIPKHINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp ---CCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ---CCCccccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 01122334678999999999999999999999984
No 182
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=2.7e-39 Score=327.99 Aligned_cols=251 Identities=20% Similarity=0.293 Sum_probs=201.6
Q ss_pred CCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCCcc------cHHHHHHHHHHHHhccCCcccceeeeeecCCceE
Q 006907 303 GNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNFT------GEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERL 375 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 375 (626)
++|.+.+.||+|+||.||++... +++.||+|.++..... ....+.+|+++++.++||||+++++++.+....+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 46888999999999999999875 5889999998754321 3567899999999999999999999999999999
Q ss_pred EEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCC----cEEEeecc
Q 006907 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESF----EAVVGDFG 451 (626)
Q Consensus 376 lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~----~~ki~DfG 451 (626)
+||||+++++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++ .+||+|||
T Consensus 85 lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg 157 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEK----ESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFG 157 (283)
T ss_dssp EEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEeecCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEecc
Confidence 999999999999999753 2489999999999999999999999 999999999999999877 89999999
Q ss_pred CccccCCCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccc
Q 006907 452 LAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERR 531 (626)
Q Consensus 452 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~ 531 (626)
++........ .....||+.|+|||.+.+..++.++||||||+++|+|++|+.||....... .........
T Consensus 158 ~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-------~~~~~~~~~- 227 (283)
T 3bhy_A 158 IAHKIEAGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE-------TLTNISAVN- 227 (283)
T ss_dssp TCEECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-------HHHHHHTTC-
T ss_pred cceeccCCCc--ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHH-------HHHHhHhcc-
Confidence 9987644322 233458999999999999999999999999999999999999997543211 111111000
Q ss_pred cccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 532 LDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 532 ~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
. ...... ....+..+.+++.+||+.||++|||+.|+++.
T Consensus 228 ~--~~~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 266 (283)
T 3bhy_A 228 Y--DFDEEY----FSNTSELAKDFIRRLLVKDPKRRMTIAQSLEH 266 (283)
T ss_dssp C--CCCHHH----HTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHC
T ss_pred c--CCcchh----cccCCHHHHHHHHHHccCCHhHCcCHHHHHhC
Confidence 0 000000 01224678999999999999999999999983
No 183
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=9.1e-40 Score=340.16 Aligned_cols=248 Identities=22% Similarity=0.336 Sum_probs=204.5
Q ss_pred CCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCCc---ccHHHHHHHHHHHHhccCCcccceeeeeecCCceEEEE
Q 006907 303 GNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNF---TGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVY 378 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 378 (626)
++|.+.+.||+|+||.||++... +++.||+|++..... .....+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 41 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 120 (335)
T 2owb_A 41 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 120 (335)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence 45778899999999999999865 478899999875422 23456889999999999999999999999999999999
Q ss_pred eecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccCC
Q 006907 379 PYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDR 458 (626)
Q Consensus 379 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~ 458 (626)
||+++++|.+++... ..+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||++.....
T Consensus 121 e~~~~~~L~~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 193 (335)
T 2owb_A 121 ELCRRRSLLELHKRR----KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY 193 (335)
T ss_dssp CCCTTCBHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred ecCCCCCHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceeccc
Confidence 999999999998753 2489999999999999999999999 999999999999999999999999999987653
Q ss_pred CCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhcccccccccc
Q 006907 459 RDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDR 538 (626)
Q Consensus 459 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 538 (626)
... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||....... .........
T Consensus 194 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-------~~~~~~~~~-------- 257 (335)
T 2owb_A 194 DGE-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE-------TYLRIKKNE-------- 257 (335)
T ss_dssp TTC-CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-------HHHHHHHTC--------
T ss_pred Ccc-cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHH-------HHHHHhcCC--------
Confidence 322 2234458999999999999899999999999999999999999997543211 111111110
Q ss_pred ccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 539 DLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 539 ~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
...+......+.+++.+||+.||++|||++|+++.
T Consensus 258 ---~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 258 ---YSIPKHINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp ---CCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ---CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 01122334678899999999999999999999983
No 184
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=3.9e-40 Score=342.39 Aligned_cols=257 Identities=24% Similarity=0.300 Sum_probs=189.5
Q ss_pred hCCCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCCcccHHHHHHHHHHHHhcc-CCcccceeeeee--------cC
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLAL-HRNLLRLYGFCM--------TP 371 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~--------~~ 371 (626)
..+|.+.++||+|+||.||+|.. .+++.||+|++..........+.+|+.++.++. ||||+++++++. ..
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 34688899999999999999986 468899999987655555667899999999996 999999999984 33
Q ss_pred CceEEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCcEEeCCCCcEEEee
Q 006907 372 EERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPK--IIHRDVKAANILLDESFEAVVGD 449 (626)
Q Consensus 372 ~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~--ivH~Dlkp~NILl~~~~~~ki~D 449 (626)
...++||||+. |+|.+++..... ...+++..+..++.|++.||.|||+. + |+||||||+|||++.++.+||+|
T Consensus 107 ~~~~lv~e~~~-g~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl~D 181 (337)
T 3ll6_A 107 AEFLLLTELCK-GQLVEFLKKMES-RGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKLCD 181 (337)
T ss_dssp EEEEEEEECCS-EEHHHHHHHHHT-TCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEBCC
T ss_pred ceEEEEEEecC-CCHHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEEec
Confidence 34789999995 799999875332 34699999999999999999999998 7 99999999999999999999999
Q ss_pred ccCccccCCCCCce-----------eeeecccCCccCcccc---ccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccc
Q 006907 450 FGLAKLLDRRDSHV-----------TTAVRGTVGHIAPEYL---STGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQ 515 (626)
Q Consensus 450 fG~a~~~~~~~~~~-----------~~~~~gt~~y~aPE~~---~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~ 515 (626)
||++.......... .....||+.|+|||++ .+..++.++||||||+++|||++|+.||.......
T Consensus 182 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~- 260 (337)
T 3ll6_A 182 FGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR- 260 (337)
T ss_dssp CTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--------
T ss_pred CccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH-
Confidence 99998765432211 1133489999999998 56678999999999999999999999997432111
Q ss_pred cccHHHHHHHhhhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccc
Q 006907 516 KGMILDCVRTLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEP 583 (626)
Q Consensus 516 ~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~ 583 (626)
+ .. ..............+.+++.+||+.||++|||+.|+++.|+.+...
T Consensus 261 ---~---~~-------------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~ 309 (337)
T 3ll6_A 261 ---I---VN-------------GKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAA 309 (337)
T ss_dssp ------------------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---h---hc-------------CcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 0 00 0000011111224578999999999999999999999999987653
No 185
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=3.6e-40 Score=335.65 Aligned_cols=258 Identities=30% Similarity=0.409 Sum_probs=197.7
Q ss_pred CCCCcCceeccCCCceEEEEEeC--Cc--cEEEEEEecCCCc---ccHHHHHHHHHHHHhccCCcccceeeeeecCCceE
Q 006907 303 GNFSPKNILGQGGYGVVYKGCLP--NR--MVVAVKRLKDPNF---TGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERL 375 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~~--~~--~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 375 (626)
++|++.+.||+|+||.||+|.+. ++ ..||+|+++.... .....+.+|++++++++||||+++++++.++. .+
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~ 96 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK 96 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence 46888899999999999999853 23 3689999875432 23456889999999999999999999998754 88
Q ss_pred EEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccc
Q 006907 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKL 455 (626)
Q Consensus 376 lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~ 455 (626)
+|+||+++++|.+++.... ..+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||++..
T Consensus 97 ~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 170 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRKHQ---GHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRA 170 (291)
T ss_dssp EEEECCTTCBHHHHHHHHG---GGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred eeEecccCCCHHHHHHhcc---CCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEcccccccc
Confidence 9999999999999997642 3489999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCce--eeeecccCCccCccccccCCCCccchhHHHHHHHHHHHh-CCCcCCCCCcccccccHHHHHHHhhhcccc
Q 006907 456 LDRRDSHV--TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNGQVQKGMILDCVRTLHEERRL 532 (626)
Q Consensus 456 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~ 532 (626)
........ .....+|+.|+|||.+.+..++.++||||||+++|||++ |+.||....... .........
T Consensus 171 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-------~~~~~~~~~-- 241 (291)
T 1u46_A 171 LPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ-------ILHKIDKEG-- 241 (291)
T ss_dssp CCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-------HHHHHHTSC--
T ss_pred ccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHH-------HHHHHHccC--
Confidence 65443322 223347889999999998889999999999999999999 999997544211 111111111
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccc
Q 006907 533 DVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEP 583 (626)
Q Consensus 533 ~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~ 583 (626)
.....+...+..+.+++.+||+.||++|||+.++++.|+++...
T Consensus 242 -------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 285 (291)
T 1u46_A 242 -------ERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPT 285 (291)
T ss_dssp -------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred -------CCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence 01112233457899999999999999999999999999987654
No 186
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=8e-40 Score=332.19 Aligned_cols=246 Identities=26% Similarity=0.386 Sum_probs=204.2
Q ss_pred CCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCC---cccHHHHHHHHHHHHhccCCcccceeeeeecCCceEEEE
Q 006907 303 GNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPN---FTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVY 378 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 378 (626)
++|.+.+.||+|+||.||+|... ++..||+|++.... ......+.+|+++++.++||||+++++++.+.+..++||
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46888999999999999999865 57889999986432 122456889999999999999999999999999999999
Q ss_pred eecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccCC
Q 006907 379 PYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDR 458 (626)
Q Consensus 379 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~ 458 (626)
||+++|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 94 e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~ 166 (284)
T 2vgo_A 94 EFAPRGELYKELQKHG----RFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPS 166 (284)
T ss_dssp CCCTTEEHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECSS
T ss_pred EeCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCcc
Confidence 9999999999997642 489999999999999999999999 999999999999999999999999999876543
Q ss_pred CCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhcccccccccc
Q 006907 459 RDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDR 538 (626)
Q Consensus 459 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 538 (626)
.. .....|++.|+|||.+.+..++.++||||||+++|||++|+.||........ .......
T Consensus 167 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-------~~~~~~~--------- 227 (284)
T 2vgo_A 167 LR---RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTET-------HRRIVNV--------- 227 (284)
T ss_dssp SC---BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH-------HHHHHTT---------
T ss_pred cc---cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHH-------HHHHhcc---------
Confidence 22 2334589999999999999999999999999999999999999975432211 1111110
Q ss_pred ccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 539 DLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 539 ~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
...++...+..+.+++.+|++.||++|||++|+++.
T Consensus 228 --~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 228 --DLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp --CCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred --ccCCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 011223345778999999999999999999999874
No 187
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1.3e-39 Score=353.65 Aligned_cols=265 Identities=22% Similarity=0.290 Sum_probs=185.2
Q ss_pred CCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCCc--ccHHHHHHHHHHHHhccCCcccceeeeeecC-----Cce
Q 006907 303 GNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNF--TGEVQFQTEVEMIGLALHRNLLRLYGFCMTP-----EER 374 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-----~~~ 374 (626)
++|.+.++||+|+||.||+|... +++.||||++..... .....+.+|+++++.++||||+++++++... ...
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 57889999999999999999854 688999999975432 2345688999999999999999999998443 568
Q ss_pred EEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCcc
Q 006907 375 LLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAK 454 (626)
Q Consensus 375 ~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~ 454 (626)
|+||||+ +++|.+++... ..+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 133 ~lv~e~~-~~~L~~~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla~ 204 (458)
T 3rp9_A 133 YVVLEIA-DSDFKKLFRTP----VYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLAR 204 (458)
T ss_dssp EEEECCC-SEEHHHHHHSS----CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCB
T ss_pred EEEEecc-ccchhhhcccC----CCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccch
Confidence 9999998 56999998642 3599999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCC--------------------------ceeeeecccCCccCcccc-ccCCCCccchhHHHHHHHHHHHh-----
Q 006907 455 LLDRRDS--------------------------HVTTAVRGTVGHIAPEYL-STGQSSEKTDVFGFGVLLLELIT----- 502 (626)
Q Consensus 455 ~~~~~~~--------------------------~~~~~~~gt~~y~aPE~~-~~~~~t~~~DvwSlGvil~ellt----- 502 (626)
....... .......||+.|+|||++ ....++.++|||||||++|||++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~ 284 (458)
T 3rp9_A 205 TVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKEN 284 (458)
T ss_dssp CTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTT
T ss_pred hccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcccc
Confidence 7643221 112344689999999986 45679999999999999999999
Q ss_pred ------CCCcCCCCCcc--------------------cccccHHHHHHHhhhcc--------------ccccccccccCC
Q 006907 503 ------GQKALDVGNGQ--------------------VQKGMILDCVRTLHEER--------------RLDVLIDRDLKG 542 (626)
Q Consensus 503 ------g~~p~~~~~~~--------------------~~~~~i~~~~~~~~~~~--------------~~~~~~~~~l~~ 542 (626)
|+++|.+.... .+...+.+..+....+. .........+.
T Consensus 285 ~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 363 (458)
T 3rp9_A 285 VAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLA- 363 (458)
T ss_dssp CSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGG-
T ss_pred ccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHH-
Confidence 55555433210 00000111100000000 00000000000
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 543 SFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 543 ~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
...+..+.++.+|+.+||+.||++|||++|+++.
T Consensus 364 ~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~H 397 (458)
T 3rp9_A 364 ERFPASSADAIHLLKRMLVFNPNKRITINECLAH 397 (458)
T ss_dssp GGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHCCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 0012235778999999999999999999999984
No 188
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=2.1e-39 Score=332.00 Aligned_cols=253 Identities=19% Similarity=0.268 Sum_probs=199.8
Q ss_pred hCCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCCcccHHHHHHHHHHHHhccCCcccceeeeeecCCceEEEEee
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPY 380 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E~ 380 (626)
.++|++.+.||+|+||.||+|... ++..||+|++..........+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 97 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEF 97 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEEC
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEe
Confidence 357888999999999999999875 4889999999876656667889999999999999999999999999999999999
Q ss_pred cCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccCCCC
Q 006907 381 MPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRD 460 (626)
Q Consensus 381 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~ 460 (626)
+++++|.+++.... ..+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++.......
T Consensus 98 ~~~~~l~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 171 (302)
T 2j7t_A 98 CPGGAVDAIMLELD---RGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL 171 (302)
T ss_dssp CTTEEHHHHHHHHT---SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHH
T ss_pred CCCCcHHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCccccccc
Confidence 99999999987532 3489999999999999999999999 99999999999999999999999999875432111
Q ss_pred CceeeeecccCCccCccccc-----cCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccccccc
Q 006907 461 SHVTTAVRGTVGHIAPEYLS-----TGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVL 535 (626)
Q Consensus 461 ~~~~~~~~gt~~y~aPE~~~-----~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 535 (626)
.......||+.|+|||.+. +..++.++||||||+++|||++|+.||...+... .............
T Consensus 172 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-------~~~~~~~~~~~~~- 242 (302)
T 2j7t_A 172 -QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR-------VLLKIAKSDPPTL- 242 (302)
T ss_dssp -HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-------HHHHHHHSCCCCC-
T ss_pred -cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHH-------HHHHHhccCCccc-
Confidence 1112345899999999983 6678999999999999999999999997543211 1111111111100
Q ss_pred cccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 536 IDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 536 ~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
..+...+..+.+++.+||+.||++|||+.|+++.
T Consensus 243 -------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 243 -------LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp -------SSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred -------CCccccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 1122334678999999999999999999999873
No 189
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=6.8e-40 Score=330.98 Aligned_cols=252 Identities=23% Similarity=0.320 Sum_probs=203.5
Q ss_pred CCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCC-cccHHHHHHHHHHHHhccCCcccceeeeeecCCceEEEEee
Q 006907 303 GNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPN-FTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPY 380 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E~ 380 (626)
++|++.+.||+|+||.||+|... +++.||+|++.... ......+.+|+.+++.++||||+++++++.+....++||||
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 86 (276)
T 2yex_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86 (276)
T ss_dssp HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEe
Confidence 46888999999999999999865 68899999986443 23345789999999999999999999999999999999999
Q ss_pred cCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccCCCC
Q 006907 381 MPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRD 460 (626)
Q Consensus 381 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~ 460 (626)
+++++|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||.+.......
T Consensus 87 ~~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 159 (276)
T 2yex_A 87 CSGGELFDRIEP----DIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 159 (276)
T ss_dssp CTTEEGGGGSBT----TTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETT
T ss_pred cCCCcHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCCCc
Confidence 999999998864 23589999999999999999999999 99999999999999999999999999998654322
Q ss_pred C-ceeeeecccCCccCccccccCCC-CccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhcccccccccc
Q 006907 461 S-HVTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDR 538 (626)
Q Consensus 461 ~-~~~~~~~gt~~y~aPE~~~~~~~-t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 538 (626)
. .......||+.|+|||.+.+..+ +.++||||||+++|||++|+.||........ ....+.. ....
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~~~~~~----~~~~------ 227 (276)
T 2yex_A 160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ--EYSDWKE----KKTY------ 227 (276)
T ss_dssp EECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSH--HHHHHHT----TCTT------
T ss_pred chhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHH--HHHHhhh----cccc------
Confidence 1 12234458999999999987665 7899999999999999999999975443211 1111111 0000
Q ss_pred ccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 539 DLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 539 ~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
.......+..+.+++.+||+.||++|||++|+++.
T Consensus 228 ---~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 228 ---LNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp ---STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ---cCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 00012234678899999999999999999999874
No 190
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=3.9e-40 Score=346.38 Aligned_cols=266 Identities=22% Similarity=0.297 Sum_probs=203.9
Q ss_pred hCCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCCc-ccHHHHHHHHHHHHhccCCcccceeeeeecCCceEEEEe
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNF-TGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYP 379 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E 379 (626)
.++|.+.+.||+|+||.||+|... ++..||+|+++.... .....+.+|+++++.++||||+++++++.+++..++|||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 111 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 111 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence 456888999999999999999865 588999999976532 234568999999999999999999999999999999999
Q ss_pred ecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccCCC
Q 006907 380 YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRR 459 (626)
Q Consensus 380 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~ 459 (626)
|+++++|.+++.... .+++..+..++.|++.||.|||+.+ +|+||||||+||+++.++.+||+|||++......
T Consensus 112 ~~~~~~L~~~l~~~~----~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 185 (360)
T 3eqc_A 112 HMDGGSLDQVLKKAG----RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 185 (360)
T ss_dssp CCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH
T ss_pred CCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCcccccc
Confidence 999999999997643 4899999999999999999999832 7999999999999999999999999998755322
Q ss_pred CCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHH-Hhh-----------
Q 006907 460 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVR-TLH----------- 527 (626)
Q Consensus 460 ~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~-~~~----------- 527 (626)
......||+.|+|||++.+..++.++||||||+++|||++|+.||...+.......+..... ...
T Consensus 186 ---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (360)
T 3eqc_A 186 ---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGR 262 (360)
T ss_dssp ---C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC-------------------
T ss_pred ---cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCC
Confidence 12234589999999999999999999999999999999999999976443211100000000 000
Q ss_pred ----------hccc----cccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 528 ----------EERR----LDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 528 ----------~~~~----~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
.... ...+.............+.++.+++.+||+.||++|||++|+++.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 325 (360)
T 3eqc_A 263 PLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 325 (360)
T ss_dssp -----------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred cccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 0000 000000000001111235679999999999999999999999984
No 191
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=4.3e-39 Score=346.81 Aligned_cols=199 Identities=24% Similarity=0.332 Sum_probs=165.8
Q ss_pred hCCCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCCc--ccHHHHHHHHHHHHhccCCcccceeeeeecC-----Cc
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPNF--TGEVQFQTEVEMIGLALHRNLLRLYGFCMTP-----EE 373 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-----~~ 373 (626)
.++|.+.+.||+|+||.||+|.. .+++.||||+++.... .....+.+|+++++.++||||+++++++... ..
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 45788999999999999999986 4578899999975432 2345788999999999999999999999766 56
Q ss_pred eEEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCc
Q 006907 374 RLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLA 453 (626)
Q Consensus 374 ~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a 453 (626)
.++||||++ |+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 105 ~~lv~e~~~-~~L~~~~~~----~~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla 176 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKT----PIFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLA 176 (432)
T ss_dssp EEEEEECCS-EEHHHHHHS----SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEecCC-cCHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCc
Confidence 899999996 599999975 23589999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCc---------------------eeeeecccCCccCcccc-ccCCCCccchhHHHHHHHHHHHhCCCcCC
Q 006907 454 KLLDRRDSH---------------------VTTAVRGTVGHIAPEYL-STGQSSEKTDVFGFGVLLLELITGQKALD 508 (626)
Q Consensus 454 ~~~~~~~~~---------------------~~~~~~gt~~y~aPE~~-~~~~~t~~~DvwSlGvil~elltg~~p~~ 508 (626)
+........ ......||+.|+|||++ ....++.++|||||||++|||++|..||.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 177 RTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp EEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 876543211 12445689999999986 55679999999999999999998655543
No 192
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=1.4e-39 Score=333.55 Aligned_cols=248 Identities=26% Similarity=0.406 Sum_probs=205.3
Q ss_pred CCCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCCc-ccHHHHHHHHHHHHhccCCcccceeeeeecCCceEEEEee
Q 006907 303 GNFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPNF-TGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYPY 380 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E~ 380 (626)
+.|...+.||+|+||.||+|.. .+++.||+|++..... .....+.+|+.+++.++||||+++++++.+....++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 101 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 101 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEe
Confidence 4578889999999999999985 4588999999975542 3456789999999999999999999999999999999999
Q ss_pred cCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccCCCC
Q 006907 381 MPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRD 460 (626)
Q Consensus 381 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~ 460 (626)
+++++|.+++.. ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 102 ~~~~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~ 173 (303)
T 3a7i_A 102 LGGGSALDLLEP-----GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ 173 (303)
T ss_dssp CTTEEHHHHHTT-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB
T ss_pred CCCCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCccc
Confidence 999999999863 3589999999999999999999999 99999999999999999999999999998765432
Q ss_pred CceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhcccccccccccc
Q 006907 461 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDRDL 540 (626)
Q Consensus 461 ~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l 540 (626)
. ......||+.|+|||.+.+..++.++||||||+++|||++|+.||....... . ....... ..
T Consensus 174 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----~---~~~~~~~-~~-------- 236 (303)
T 3a7i_A 174 I-KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMK----V---LFLIPKN-NP-------- 236 (303)
T ss_dssp C-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH----H---HHHHHHS-CC--------
T ss_pred c-ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHH----H---HHHhhcC-CC--------
Confidence 2 2234458999999999999999999999999999999999999997543211 1 1111111 10
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 541 KGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 541 ~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
...+...+..+.+++.+||+.||++|||+.|+++.
T Consensus 237 -~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 237 -PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp -CCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred -CCCccccCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 11122234678999999999999999999999884
No 193
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=7.3e-40 Score=333.20 Aligned_cols=256 Identities=21% Similarity=0.284 Sum_probs=189.8
Q ss_pred HhCCCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCCccc-HH-HHHHHHHHHHhccCCcccceeeeeecCCceEEE
Q 006907 301 ATGNFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPNFTG-EV-QFQTEVEMIGLALHRNLLRLYGFCMTPEERLLV 377 (626)
Q Consensus 301 ~~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~~-~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv 377 (626)
..++|++.+.||+|+||.||+|.. .+++.||+|+++...... .. .+.++...++.++||||+++++++.+++..++|
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 84 (290)
T 3fme_A 5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 84 (290)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEE
T ss_pred cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEE
Confidence 346788899999999999999986 568899999997653222 22 344455557888999999999999999999999
Q ss_pred EeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccC
Q 006907 378 YPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLD 457 (626)
Q Consensus 378 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~ 457 (626)
|||++ |+|.+++.........+++..+..++.|++.||.|||+++ +|+||||||+||+++.++.+||+|||++....
T Consensus 85 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T 3fme_A 85 MELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLV 161 (290)
T ss_dssp EECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred Eehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 99997 5998888764444567999999999999999999999853 89999999999999999999999999998665
Q ss_pred CCCCceeeeecccCCccCcccc----ccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccccc
Q 006907 458 RRDSHVTTAVRGTVGHIAPEYL----STGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLD 533 (626)
Q Consensus 458 ~~~~~~~~~~~gt~~y~aPE~~----~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~ 533 (626)
.... .....||+.|+|||.+ .+..++.++||||||+++|||++|+.||....... .............
T Consensus 162 ~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------~~~~~~~~~~~~~ 233 (290)
T 3fme_A 162 DDVA--KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPF------QQLKQVVEEPSPQ 233 (290)
T ss_dssp ----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHH------HHHHHHHHSCCCC
T ss_pred cccc--ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchH------HHHHHHhccCCCC
Confidence 4322 2233589999999996 55678999999999999999999999997432211 1111111111100
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 534 VLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 534 ~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
......+..+.+++.+||+.||++|||+.|+++.
T Consensus 234 ---------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~h 267 (290)
T 3fme_A 234 ---------LPADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 267 (290)
T ss_dssp ---------CCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred ---------cccccCCHHHHHHHHHHhhcChhhCcCHHHHHhC
Confidence 0112234678999999999999999999999873
No 194
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=4.9e-40 Score=349.85 Aligned_cols=263 Identities=24% Similarity=0.316 Sum_probs=197.5
Q ss_pred CCCcCceeccCCCceEEEEEeCCccEEEEEEecCCCcccHHHHHHHHHHHHhccCCcccceeeeeecCCc------eEEE
Q 006907 304 NFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEE------RLLV 377 (626)
Q Consensus 304 ~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~------~~lv 377 (626)
+|.+.++||+|+||.||+|...++..||+|++..... ...+|+++++.++||||+++++++..... .++|
T Consensus 41 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv 116 (394)
T 4e7w_A 41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLV 116 (394)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEE
T ss_pred eEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEE
Confidence 5788899999999999999987766688888754322 22469999999999999999999865433 7899
Q ss_pred EeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeC-CCCcEEEeeccCcccc
Q 006907 378 YPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLD-ESFEAVVGDFGLAKLL 456 (626)
Q Consensus 378 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~-~~~~~ki~DfG~a~~~ 456 (626)
|||++++ +...+.........+++..+..++.|++.||.|||++ +|+||||||+|||++ .++.+||+|||+++..
T Consensus 117 ~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~ 192 (394)
T 4e7w_A 117 LEYVPET-VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL 192 (394)
T ss_dssp EECCSEE-HHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred eeccCcc-HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCcccc
Confidence 9999874 4444443333345699999999999999999999999 999999999999999 7999999999999876
Q ss_pred CCCCCceeeeecccCCccCccccccC-CCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhc------
Q 006907 457 DRRDSHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEE------ 529 (626)
Q Consensus 457 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~------ 529 (626)
..... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||...+...+...+.........+
T Consensus 193 ~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~ 270 (394)
T 4e7w_A 193 IAGEP--NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMN 270 (394)
T ss_dssp CTTCC--CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHC
T ss_pred cCCCC--CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhC
Confidence 44332 2334589999999999765 58999999999999999999999998765444333333221111100
Q ss_pred -----cccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 530 -----RRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 530 -----~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
..........+...+....+.++.+|+.+||+.||++|||+.|+++.
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 271 PNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp GGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred hhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 00000000000001222345789999999999999999999999874
No 195
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=1.7e-39 Score=328.20 Aligned_cols=248 Identities=22% Similarity=0.358 Sum_probs=196.4
Q ss_pred hCCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCC---cccHHHHHHHHHHHHhccCCcccceeeeeecCCceEEE
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPN---FTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLV 377 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv 377 (626)
.++|.+.+.||+|+||.||+|... +++.||+|++.... ......+.+|+++++.++||||+++++++.+.+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 357888999999999999999875 68899999986432 12345688999999999999999999999999999999
Q ss_pred EeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccC
Q 006907 378 YPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLD 457 (626)
Q Consensus 378 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~ 457 (626)
|||+++++|.+++.... .+++..+..++.|++.||.|||+. +|+|+||||+||+++.++.+||+|||++....
T Consensus 90 ~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~ 162 (276)
T 2h6d_A 90 MEYVSGGELFDYICKHG----RVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMS 162 (276)
T ss_dssp EECCCSCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCC
T ss_pred EeccCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccC
Confidence 99999999999997642 489999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCceeeeecccCCccCccccccCCC-CccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhcccccccc
Q 006907 458 RRDSHVTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLI 536 (626)
Q Consensus 458 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 536 (626)
... ......||+.|+|||.+.+..+ +.++||||||+++|+|++|+.||....... +. ...... .
T Consensus 163 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~----~~---~~~~~~-~----- 227 (276)
T 2h6d_A 163 DGE--FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPT----LF---KKIRGG-V----- 227 (276)
T ss_dssp C---------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HH---HHHHHC-C-----
T ss_pred CCc--ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH----HH---HHhhcC-c-----
Confidence 432 2233458999999999987765 689999999999999999999997543211 11 111111 0
Q ss_pred ccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 537 DRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 537 ~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
...+...+..+.+++.+||+.||++|||+.|+++.
T Consensus 228 -----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 228 -----FYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp -----CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred -----ccCchhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 01122234678999999999999999999999984
No 196
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=5e-40 Score=336.52 Aligned_cols=268 Identities=26% Similarity=0.365 Sum_probs=189.2
Q ss_pred HHHHhCCCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCC-cccHHHHHHHHHHHHhccCCcccceeeeeecCCceE
Q 006907 298 LQIATGNFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPN-FTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERL 375 (626)
Q Consensus 298 ~~~~~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 375 (626)
..+..++|.+.+.||+|+||.||+|.. .+++.||||++.... .....++.+|+.+++.++||||+++++++...+..+
T Consensus 10 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 89 (303)
T 2vwi_A 10 WSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELW 89 (303)
T ss_dssp ---CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEE
T ss_pred cccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcE
Confidence 345667899999999999999999985 467899999987543 233456889999999999999999999999999999
Q ss_pred EEEeecCCCChHHHHhhcc----CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeecc
Q 006907 376 LVYPYMPNGSVADCLRDTR----QAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFG 451 (626)
Q Consensus 376 lv~E~~~~gsL~~~l~~~~----~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG 451 (626)
+||||+++++|.+++.... .....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||
T Consensus 90 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg 166 (303)
T 2vwi_A 90 LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFG 166 (303)
T ss_dssp EEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCH
T ss_pred EEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEecc
Confidence 9999999999999997421 1234589999999999999999999999 99999999999999999999999999
Q ss_pred CccccCCCCC----ceeeeecccCCccCcccccc-CCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHh
Q 006907 452 LAKLLDRRDS----HVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTL 526 (626)
Q Consensus 452 ~a~~~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~ 526 (626)
++........ .......||+.|+|||.+.+ ..++.++||||||+++|||++|+.||........ ... ..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----~~~--~~ 240 (303)
T 2vwi_A 167 VSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV----LML--TL 240 (303)
T ss_dssp HHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGH----HHH--HH
T ss_pred chheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhH----HHH--Hh
Confidence 9876543221 11233458999999999976 5689999999999999999999999975442211 100 11
Q ss_pred hhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 527 HEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 527 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
.. ..................+..+.+++.+||+.||++|||+.|+++.
T Consensus 241 -~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 241 -QN-DPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp -TS-SCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred -cc-CCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 00 0000000000001112234678999999999999999999999874
No 197
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=1.8e-39 Score=367.37 Aligned_cols=251 Identities=23% Similarity=0.302 Sum_probs=205.3
Q ss_pred HHHhCCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCC---cccHHHHHHHHHHHHhc-cCCcccceeeeeecCCc
Q 006907 299 QIATGNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPN---FTGEVQFQTEVEMIGLA-LHRNLLRLYGFCMTPEE 373 (626)
Q Consensus 299 ~~~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~ 373 (626)
....++|.+.++||+|+||.||+|... +++.||||+++... ......+..|..++..+ +||+|+++++++.+.+.
T Consensus 337 ~~~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~ 416 (674)
T 3pfq_A 337 RMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDR 416 (674)
T ss_dssp ---CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSE
T ss_pred cccccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCE
Confidence 345568999999999999999999864 57889999997432 12234577899999877 69999999999999999
Q ss_pred eEEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCc
Q 006907 374 RLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLA 453 (626)
Q Consensus 374 ~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a 453 (626)
.|+||||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++++||+|||++
T Consensus 417 ~~lV~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla 489 (674)
T 3pfq_A 417 LYFVMEYVNGGDLMYHIQQVG----RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMC 489 (674)
T ss_dssp EEEEEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTC
T ss_pred EEEEEeCcCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeeccee
Confidence 999999999999999998642 489999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccccc
Q 006907 454 KLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLD 533 (626)
Q Consensus 454 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~ 533 (626)
+...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...+.... .......
T Consensus 490 ~~~~~~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~-------~~~i~~~---- 557 (674)
T 3pfq_A 490 KENIWDG-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL-------FQSIMEH---- 557 (674)
T ss_dssp EECCCTT-CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-------HHHHHSS----
T ss_pred eccccCC-cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHH-------HHHHHhC----
Confidence 8643322 233455699999999999999999999999999999999999999986442211 1111110
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCH-----HHHHH
Q 006907 534 VLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKM-----SEVLK 575 (626)
Q Consensus 534 ~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~-----~evl~ 575 (626)
...++...+.++.+|+.+||+.||++||++ +||++
T Consensus 558 -------~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 558 -------NVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp -------CCCCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred -------CCCCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 112334456789999999999999999997 67665
No 198
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=5.8e-40 Score=352.17 Aligned_cols=263 Identities=26% Similarity=0.325 Sum_probs=198.2
Q ss_pred CCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCCcccHHHHHHHHHHHHhccCCcccceeeeeecC----C--ceEE
Q 006907 304 NFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTP----E--ERLL 376 (626)
Q Consensus 304 ~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~----~--~~~l 376 (626)
+|.+.++||+|+||.||+|... +++.||||++.... ....+|+++++.++||||+++++++... + ..++
T Consensus 55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~l 130 (420)
T 1j1b_A 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 130 (420)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEE
T ss_pred eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEe
Confidence 4777899999999999999874 58999999986532 2234699999999999999999988542 1 2578
Q ss_pred EEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCC-CcEEEeeccCccc
Q 006907 377 VYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDES-FEAVVGDFGLAKL 455 (626)
Q Consensus 377 v~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~-~~~ki~DfG~a~~ 455 (626)
||||+++ +|.+.+.........+++..+..++.|+++||.|||++ +|+||||||+|||++.+ +.+||+|||+++.
T Consensus 131 v~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~ 206 (420)
T 1j1b_A 131 VLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 206 (420)
T ss_dssp EEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred ehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhhhh
Confidence 9999976 77777665434456799999999999999999999999 99999999999999954 6789999999987
Q ss_pred cCCCCCceeeeecccCCccCccccccC-CCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhc-----
Q 006907 456 LDRRDSHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEE----- 529 (626)
Q Consensus 456 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~----- 529 (626)
...... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||...+..++...+.........+
T Consensus 207 ~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~ 284 (420)
T 1j1b_A 207 LVRGEP--NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM 284 (420)
T ss_dssp CCTTCC--CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHH
T ss_pred cccCCC--ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhh
Confidence 654322 2334589999999999765 78999999999999999999999998665433333332221111000
Q ss_pred -cccccccccccCC-----CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 530 -RRLDVLIDRDLKG-----SFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 530 -~~~~~~~~~~l~~-----~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
........+.... .++...+.++.+|+.+||+.||++|||+.|+++.
T Consensus 285 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 285 NPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp CSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 0000000011100 1223345789999999999999999999999873
No 199
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=7.4e-39 Score=337.23 Aligned_cols=266 Identities=21% Similarity=0.307 Sum_probs=203.9
Q ss_pred hCCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCCcc-cHHHHHHHHHHHHhccCCcccceeeeeecC-----Cce
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNFT-GEVQFQTEVEMIGLALHRNLLRLYGFCMTP-----EER 374 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-----~~~ 374 (626)
.++|.+.+.||+|+||.||+|... ++..||+|++...... ....+.+|++++++++||||+++++++... ...
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 457889999999999999999854 6788999999754322 235688999999999999999999998765 367
Q ss_pred EEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCcc
Q 006907 375 LLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAK 454 (626)
Q Consensus 375 ~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~ 454 (626)
++||||++ |+|.+++... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 106 ~iv~e~~~-~~L~~~l~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~ 176 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKTQ-----HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLAR 176 (364)
T ss_dssp EEEEECCS-EEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEcccC-cCHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceE
Confidence 99999997 5999998742 489999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCce--eeeecccCCccCcccccc-CCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccc
Q 006907 455 LLDRRDSHV--TTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERR 531 (626)
Q Consensus 455 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~ 531 (626)
......... .....||+.|+|||++.+ ..++.++||||||+++|||++|+.||...........+.........+..
T Consensus 177 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 256 (364)
T 3qyz_A 177 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 256 (364)
T ss_dssp ECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHH
T ss_pred ecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Confidence 765332211 233468999999998754 45899999999999999999999999876544443333322211111000
Q ss_pred cc--------cccccccCCCC-----CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 532 LD--------VLIDRDLKGSF-----DPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 532 ~~--------~~~~~~l~~~~-----~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
.. ........... .+..+.++.+++.+||+.||++|||+.|+++.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 257 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp HTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00 00000000000 11234678999999999999999999999984
No 200
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=5e-39 Score=338.54 Aligned_cols=258 Identities=22% Similarity=0.325 Sum_probs=205.8
Q ss_pred HHHHHHhCCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCCcc--------cHHHHHHHHHHHHhc-cCCccccee
Q 006907 296 RELQIATGNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNFT--------GEVQFQTEVEMIGLA-LHRNLLRLY 365 (626)
Q Consensus 296 ~~~~~~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l-~h~nIv~l~ 365 (626)
.......++|.+.+.||+|+||.||+|... +|+.||||+++..... ....+.+|+.+++.+ +||||++++
T Consensus 87 ~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 166 (365)
T 2y7j_A 87 AAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLI 166 (365)
T ss_dssp HHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEE
T ss_pred hhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEE
Confidence 344455677999999999999999999875 6899999998754311 123578899999999 799999999
Q ss_pred eeeecCCceEEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcE
Q 006907 366 GFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEA 445 (626)
Q Consensus 366 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ 445 (626)
+++......++||||+++++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+
T Consensus 167 ~~~~~~~~~~lv~e~~~g~~L~~~l~~~----~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~i 239 (365)
T 2y7j_A 167 DSYESSSFMFLVFDLMRKGELFDYLTEK----VALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQI 239 (365)
T ss_dssp EEEEBSSEEEEEECCCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCE
T ss_pred EEEeeCCEEEEEEEeCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCE
Confidence 9999999999999999999999999753 2489999999999999999999999 99999999999999999999
Q ss_pred EEeeccCccccCCCCCceeeeecccCCccCcccccc------CCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccH
Q 006907 446 VVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLST------GQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMI 519 (626)
Q Consensus 446 ki~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i 519 (626)
||+|||++........ .....||+.|+|||++.+ ..++.++||||||+++|||++|+.||.......
T Consensus 240 kl~DfG~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~----- 312 (365)
T 2y7j_A 240 RLSDFGFSCHLEPGEK--LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQIL----- 312 (365)
T ss_dssp EECCCTTCEECCTTCC--BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-----
T ss_pred EEEecCcccccCCCcc--cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHH-----
Confidence 9999999987654332 234569999999999863 357899999999999999999999997543211
Q ss_pred HHHHHHhhhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 520 LDCVRTLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
......... ... ..+.. ...+..+.+++.+||+.||++|||+.|+++.
T Consensus 313 --~~~~i~~~~-~~~-~~~~~-----~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 313 --MLRMIMEGQ-YQF-SSPEW-----DDRSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp --HHHHHHHTC-CCC-CHHHH-----SSSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred --HHHHHHhCC-CCC-CCccc-----ccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 111111110 000 00000 0123678999999999999999999999874
No 201
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=3.6e-39 Score=338.78 Aligned_cols=274 Identities=21% Similarity=0.247 Sum_probs=196.4
Q ss_pred HHHHHHhCCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCCcccHHHHHHHHHHHHhccCCcccceeeeeecCCc-
Q 006907 296 RELQIATGNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEE- 373 (626)
Q Consensus 296 ~~~~~~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~- 373 (626)
.......++|.+.+.||+|+||.||+|... +++.||||++...... ...+.+|++.++.++||||+++++++.....
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF-RNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTC-CCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccc-cHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 445667789999999999999999999864 5889999998654322 2355678888889999999999999965443
Q ss_pred ------eEEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHH--hcCCCCeEecCCCCCcEEeCC-CCc
Q 006907 374 ------RLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLH--EQCNPKIIHRDVKAANILLDE-SFE 444 (626)
Q Consensus 374 ------~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH--~~~~~~ivH~Dlkp~NILl~~-~~~ 444 (626)
.++||||+++ +|...+.........+++..+..++.|++.||.||| +. +|+||||||+|||++. ++.
T Consensus 95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~~ 170 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADGT 170 (360)
T ss_dssp CTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTTE
T ss_pred cccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCCc
Confidence 7899999976 666655544444567899999999999999999999 77 9999999999999996 899
Q ss_pred EEEeeccCccccCCCCCceeeeecccCCccCccccccCC-CCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHH
Q 006907 445 AVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQ-SSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCV 523 (626)
Q Consensus 445 ~ki~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~ 523 (626)
+||+|||++........ .....||+.|+|||++.+.. ++.++||||||+++|||++|+.||...........+....
T Consensus 171 ~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~ 248 (360)
T 3e3p_A 171 LKLCDFGSAKKLSPSEP--NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVL 248 (360)
T ss_dssp EEECCCTTCBCCCTTSC--CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHH
T ss_pred EEEeeCCCceecCCCCC--cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHc
Confidence 99999999987654332 23345899999999996654 8999999999999999999999998655433322222211
Q ss_pred H--------Hhhhccccccccc------cccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 524 R--------TLHEERRLDVLID------RDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 524 ~--------~~~~~~~~~~~~~------~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
. ............+ ...........+..+.+++.+||+.||++|||+.|+++.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 249 GCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp CCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 1 1100000000000 001111222356789999999999999999999999874
No 202
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=7.1e-39 Score=332.43 Aligned_cols=257 Identities=18% Similarity=0.227 Sum_probs=200.8
Q ss_pred CCCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCCcccHHHHHHHHHHHHhcc-CCcccceeeeeec--CCceEEEE
Q 006907 303 GNFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLAL-HRNLLRLYGFCMT--PEERLLVY 378 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~--~~~~~lv~ 378 (626)
++|++.+.||+|+||.||+|.. .+++.||+|+++.. ....+.+|+++++.++ ||||+++++++.+ ....++||
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~ 112 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 112 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence 5688899999999999999985 56889999999743 3567899999999997 9999999999987 56789999
Q ss_pred eecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCC-cEEEeeccCccccC
Q 006907 379 PYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESF-EAVVGDFGLAKLLD 457 (626)
Q Consensus 379 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~-~~ki~DfG~a~~~~ 457 (626)
||+++++|.+++.. +++..+..++.|++.||+|||++ +|+||||||+|||++.++ .+||+|||++....
T Consensus 113 e~~~~~~l~~~~~~-------~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~ 182 (330)
T 3nsz_A 113 EHVNNTDFKQLYQT-------LTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 182 (330)
T ss_dssp ECCCCCCHHHHGGG-------CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred eccCchhHHHHHHh-------CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcC
Confidence 99999999999853 88999999999999999999999 999999999999999666 89999999998765
Q ss_pred CCCCceeeeecccCCccCcccccc-CCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhc-------
Q 006907 458 RRDSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEE------- 529 (626)
Q Consensus 458 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~------- 529 (626)
.... .....||..|+|||.+.+ ..++.++||||||+++|||++|+.||....... ..+..........
T Consensus 183 ~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~--~~l~~~~~~~~~~~~~~~~~ 258 (330)
T 3nsz_A 183 PGQE--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY--DQLVRIAKVLGTEDLYDYID 258 (330)
T ss_dssp TTCC--CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHH--HHHHHHHHHHCHHHHHHHHH
T ss_pred CCCc--cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchH--HHHHHHHHhcCCchhhhHHH
Confidence 4332 233458999999999977 678999999999999999999999996443221 1111111100000
Q ss_pred -cc--------------cccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 530 -RR--------------LDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 530 -~~--------------~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
.. .................+.++.+++.+||+.||++|||++|+++.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 259 KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp HTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred HhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 00 000000011111122246789999999999999999999999984
No 203
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.2e-39 Score=338.18 Aligned_cols=262 Identities=19% Similarity=0.256 Sum_probs=206.2
Q ss_pred chHHHHHHhCCCCcC-ceeccCCCceEEEEEeC-CccEEEEEEecCCCc--ccHHHHHHHHHHHHhcc-CCcccceeeee
Q 006907 294 SFRELQIATGNFSPK-NILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNF--TGEVQFQTEVEMIGLAL-HRNLLRLYGFC 368 (626)
Q Consensus 294 ~~~~~~~~~~~f~~~-~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~-h~nIv~l~~~~ 368 (626)
.++..+...+.|.+. +.||+|+||.||+|... +++.||+|+++.... .....+.+|+.++..+. ||||+++++++
T Consensus 19 ~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~ 98 (327)
T 3lm5_A 19 YFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVY 98 (327)
T ss_dssp CSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEE
T ss_pred HHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEE
Confidence 344445556677776 89999999999999865 588999999875432 33567899999999985 69999999999
Q ss_pred ecCCceEEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC---CCcE
Q 006907 369 MTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDE---SFEA 445 (626)
Q Consensus 369 ~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~---~~~~ 445 (626)
.+....++||||+++|+|.+++... ....+++..+..++.|++.||+|||++ +|+||||||+||+++. ++.+
T Consensus 99 ~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~ 173 (327)
T 3lm5_A 99 ENTSEIILILEYAAGGEIFSLCLPE--LAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDI 173 (327)
T ss_dssp ECSSEEEEEEECCTTEEGGGGGSSC--C-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCE
T ss_pred EeCCeEEEEEEecCCCcHHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcE
Confidence 9999999999999999999998642 234699999999999999999999999 9999999999999997 7899
Q ss_pred EEeeccCccccCCCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHH
Q 006907 446 VVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRT 525 (626)
Q Consensus 446 ki~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~ 525 (626)
||+|||++........ .....||+.|+|||++.+..++.++||||||+++|||++|+.||.......... ....
T Consensus 174 kL~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~----~i~~ 247 (327)
T 3lm5_A 174 KIVDFGMSRKIGHACE--LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYL----NISQ 247 (327)
T ss_dssp EECCGGGCEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH----HHHH
T ss_pred EEeeCccccccCCccc--cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHH----HHHh
Confidence 9999999987653322 233469999999999999999999999999999999999999997544221110 1110
Q ss_pred hhhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 526 LHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 526 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
. . ...........+..+.+++.+||+.||++|||++|+++.
T Consensus 248 ~--~--------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 248 V--N--------VDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp T--C--------CCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred c--c--------cccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 0 0 001111122345778999999999999999999999874
No 204
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.6e-38 Score=327.38 Aligned_cols=252 Identities=24% Similarity=0.349 Sum_probs=200.5
Q ss_pred HHhCCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCCcccHHHHHHHHHHHHhccCCcccceeeeeecCCceEEEE
Q 006907 300 IATGNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVY 378 (626)
Q Consensus 300 ~~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 378 (626)
...++|.+.+.||+|+||.||+|... +++.||+|.+.... ....+.+|+.+++.++||||+++++++.+....++||
T Consensus 26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 103 (314)
T 3com_A 26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVM 103 (314)
T ss_dssp ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEe
Confidence 34567899999999999999999865 48899999997643 3456889999999999999999999999999999999
Q ss_pred eecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccCC
Q 006907 379 PYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDR 458 (626)
Q Consensus 379 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~ 458 (626)
||+++++|.+++... ...+++..+..++.|++.||.|||+. +|+|+||||+||+++.++.+||+|||++.....
T Consensus 104 e~~~~~~L~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 177 (314)
T 3com_A 104 EYCGAGSVSDIIRLR---NKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTD 177 (314)
T ss_dssp ECCTTEEHHHHHHHH---TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECBT
T ss_pred ecCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhhh
Confidence 999999999999743 23589999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhcccccccccc
Q 006907 459 RDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDR 538 (626)
Q Consensus 459 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 538 (626)
... ......||+.|+|||.+.+..++.++||||||+++|+|++|+.||....... .......... ...
T Consensus 178 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-------~~~~~~~~~~-~~~--- 245 (314)
T 3com_A 178 TMA-KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMR-------AIFMIPTNPP-PTF--- 245 (314)
T ss_dssp TBS-CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH-------HHHHHHHSCC-CCC---
T ss_pred hcc-ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHH-------HHHHHhcCCC-ccc---
Confidence 322 2233458999999999999899999999999999999999999997543211 1111111100 000
Q ss_pred ccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006907 539 DLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLK 575 (626)
Q Consensus 539 ~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 575 (626)
..+...+..+.+++.+||+.||++|||+.|+++
T Consensus 246 ----~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 246 ----RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp ----SSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ----CCcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 111223467899999999999999999999987
No 205
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=2e-39 Score=347.83 Aligned_cols=254 Identities=23% Similarity=0.327 Sum_probs=193.0
Q ss_pred HHhCCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCCc--------ccHHHHHHHHHHHHhccCCcccceeeeeec
Q 006907 300 IATGNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNF--------TGEVQFQTEVEMIGLALHRNLLRLYGFCMT 370 (626)
Q Consensus 300 ~~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~ 370 (626)
...++|.+.+.||+|+||.||+|... +++.||+|++..... .....+.+|++++++++||||+++++++..
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 34678999999999999999999864 578999999864321 112247899999999999999999999854
Q ss_pred CCceEEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCC---CcEEE
Q 006907 371 PEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDES---FEAVV 447 (626)
Q Consensus 371 ~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~---~~~ki 447 (626)
+..++||||+++|+|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.+ ..+||
T Consensus 212 -~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl 283 (419)
T 3i6u_A 212 -EDYYIVLELMEGGELFDKVVG----NKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKI 283 (419)
T ss_dssp -SEEEEEEECCTTCBGGGGTSS----SCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEE
T ss_pred -CceEEEEEcCCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEE
Confidence 557999999999999998864 23589999999999999999999999 99999999999999754 45999
Q ss_pred eeccCccccCCCCCceeeeecccCCccCcccccc---CCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHH
Q 006907 448 GDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLST---GQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVR 524 (626)
Q Consensus 448 ~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~ 524 (626)
+|||++...... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ +.....
T Consensus 284 ~DFG~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~---~~~~i~ 358 (419)
T 3i6u_A 284 TDFGHSKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS---LKDQIT 358 (419)
T ss_dssp CCSSTTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCC---HHHHHH
T ss_pred eecccceecCCC--ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHH---HHHHHh
Confidence 999999876532 22334569999999999853 5688999999999999999999999975432211 111111
Q ss_pred HhhhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 525 TLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 525 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
. ..... .+.. ....+..+.+++.+||+.||++|||++|+++.
T Consensus 359 ~----~~~~~--~~~~----~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 359 S----GKYNF--IPEV----WAEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp T----TCCCC--CHHH----HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred c----CCCCC--Cchh----hcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 1 00000 0000 01134678999999999999999999999985
No 206
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=2e-39 Score=365.89 Aligned_cols=262 Identities=22% Similarity=0.355 Sum_probs=208.5
Q ss_pred HHHHhCCCCcCceeccCCCceEEEEEeCC----ccEEEEEEecCCCcc-cHHHHHHHHHHHHhccCCcccceeeeeecCC
Q 006907 298 LQIATGNFSPKNILGQGGYGVVYKGCLPN----RMVVAVKRLKDPNFT-GEVQFQTEVEMIGLALHRNLLRLYGFCMTPE 372 (626)
Q Consensus 298 ~~~~~~~f~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~ 372 (626)
.++..++|.+.+.||+|+||.||+|.+.. +..||+|+++..... ....+.+|+.++++++||||+++++++. .+
T Consensus 385 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~ 463 (656)
T 2j0j_A 385 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-EN 463 (656)
T ss_dssp TBCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SS
T ss_pred cccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cC
Confidence 33445678889999999999999998642 467999998754322 3357899999999999999999999985 46
Q ss_pred ceEEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccC
Q 006907 373 ERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGL 452 (626)
Q Consensus 373 ~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~ 452 (626)
..++||||+++|+|.+++... ...+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+
T Consensus 464 ~~~lv~E~~~~g~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~ 537 (656)
T 2j0j_A 464 PVWIIMELCTLGELRSFLQVR---KFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGL 537 (656)
T ss_dssp SCEEEEECCTTCBHHHHHHHT---TTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCC
T ss_pred ceEEEEEcCCCCcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCC
Confidence 689999999999999999753 23589999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHh-CCCcCCCCCcccccccHHHHHHHhhhccc
Q 006907 453 AKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT-GQKALDVGNGQVQKGMILDCVRTLHEERR 531 (626)
Q Consensus 453 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~ 531 (626)
+...............+|+.|+|||.+.+..++.++||||||+++|||++ |..||....... + .........
T Consensus 538 a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~----~---~~~i~~~~~ 610 (656)
T 2j0j_A 538 SRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND----V---IGRIENGER 610 (656)
T ss_dssp CCSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH----H---HHHHHHTCC
T ss_pred CeecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHH----H---HHHHHcCCC
Confidence 98765544333334457889999999999999999999999999999997 999997543221 1 111111111
Q ss_pred cccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccc
Q 006907 532 LDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEP 583 (626)
Q Consensus 532 ~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~ 583 (626)
...+...+..+.+++.+||+.||++|||+.|+++.|+.++..
T Consensus 611 ----------~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~ 652 (656)
T 2j0j_A 611 ----------LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 652 (656)
T ss_dssp ----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ----------CCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 112334457899999999999999999999999999987653
No 207
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=2.6e-39 Score=335.06 Aligned_cols=268 Identities=24% Similarity=0.310 Sum_probs=204.3
Q ss_pred HhCCCCcCceeccCCCceEEEEEe--CCccEEEEEEecCCCc--ccHHHHHHHHHHHHhc---cCCcccceeeeee----
Q 006907 301 ATGNFSPKNILGQGGYGVVYKGCL--PNRMVVAVKRLKDPNF--TGEVQFQTEVEMIGLA---LHRNLLRLYGFCM---- 369 (626)
Q Consensus 301 ~~~~f~~~~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~nIv~l~~~~~---- 369 (626)
..++|.+.+.||+|+||.||+|.. .+++.||+|+++.... .....+.+|+.+++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 456799999999999999999987 4678999999864321 1223566788777766 7999999999987
Q ss_pred -cCCceEEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEe
Q 006907 370 -TPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVG 448 (626)
Q Consensus 370 -~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~ 448 (626)
.....++||||++ |+|.+++.... ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~ 162 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVP--EPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLA 162 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSC--TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEe
Confidence 5567899999997 69999997643 33589999999999999999999999 99999999999999999999999
Q ss_pred eccCccccCCCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhh
Q 006907 449 DFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHE 528 (626)
Q Consensus 449 DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~ 528 (626)
|||++....... ......||+.|+|||++.+..++.++||||||+++|||++|+.||...........+.........
T Consensus 163 Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~ 240 (326)
T 1blx_A 163 DFGLARIYSFQM--ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGE 240 (326)
T ss_dssp SCCSCCCCCGGG--GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCG
T ss_pred cCcccccccCCC--CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCc
Confidence 999997654322 223345899999999999999999999999999999999999999865533322222222111111
Q ss_pred cccccccccc---------ccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 529 ERRLDVLIDR---------DLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 529 ~~~~~~~~~~---------~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
..+......+ .....+....+..+.+++.+||+.||++|||+.|+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 241 EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp GGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 1111100000 00001123345778999999999999999999999863
No 208
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=2e-39 Score=348.83 Aligned_cols=264 Identities=19% Similarity=0.253 Sum_probs=202.5
Q ss_pred hCCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCCcccHHHHHHHHHHHHhc------cCCcccceeeeeecCCce
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNFTGEVQFQTEVEMIGLA------LHRNLLRLYGFCMTPEER 374 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~h~nIv~l~~~~~~~~~~ 374 (626)
..+|.+.++||+|+||.||+|... +++.||||+++... ....++.+|+++++.+ +|+||+++++++......
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 174 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence 346888999999999999999754 58899999997532 2234677888888877 467999999999999999
Q ss_pred EEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCc--EEEeeccC
Q 006907 375 LLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFE--AVVGDFGL 452 (626)
Q Consensus 375 ~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~--~ki~DfG~ 452 (626)
++||||+. ++|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+|||+
T Consensus 175 ~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG~ 248 (429)
T 3kvw_A 175 CMTFELLS-MNLYELIKKNK--FQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGS 248 (429)
T ss_dssp EEEECCCC-CBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCTT
T ss_pred EEEEeccC-CCHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeeccc
Confidence 99999996 69999997643 33589999999999999999999999 9999999999999999887 99999999
Q ss_pred ccccCCCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhc---
Q 006907 453 AKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEE--- 529 (626)
Q Consensus 453 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~--- 529 (626)
+...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...+.......+.+........
T Consensus 249 a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~ 324 (429)
T 3kvw_A 249 SCYEHQR----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLD 324 (429)
T ss_dssp CEETTCC----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHH
T ss_pred ceecCCc----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHH
Confidence 9765432 223458999999999999999999999999999999999999998665433322222211100000
Q ss_pred --cccccccccc---------------------------cCC-----C----CCHHHHHHHHHHHHHccCCCCCCCCCHH
Q 006907 530 --RRLDVLIDRD---------------------------LKG-----S----FDPTELEKMVQLALQCTQSHPNLRPKMS 571 (626)
Q Consensus 530 --~~~~~~~~~~---------------------------l~~-----~----~~~~~~~~l~~l~~~cl~~~P~~RPs~~ 571 (626)
.+....++.. ... . ......+.+.+|+.+||+.||++|||++
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~ 404 (429)
T 3kvw_A 325 ASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPG 404 (429)
T ss_dssp TBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred hhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHH
Confidence 0000000000 000 0 0011246789999999999999999999
Q ss_pred HHHHH
Q 006907 572 EVLKV 576 (626)
Q Consensus 572 evl~~ 576 (626)
|+++.
T Consensus 405 e~L~H 409 (429)
T 3kvw_A 405 QALRH 409 (429)
T ss_dssp HHHTS
T ss_pred HHhCC
Confidence 99984
No 209
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.5e-38 Score=345.51 Aligned_cols=262 Identities=17% Similarity=0.217 Sum_probs=207.5
Q ss_pred hCCCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCCcccHHHHHHHHHHHHhccC-CcccceeeeeecCCceEEEEe
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALH-RNLLRLYGFCMTPEERLLVYP 379 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~nIv~l~~~~~~~~~~~lv~E 379 (626)
.++|.+.++||+|+||.||+|.. .+++.||||+++.... ..++..|+++++.++| +++..+..++...+..++|||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme 83 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD 83 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence 46789999999999999999985 5688999999875432 2357889999999986 556666666677888899999
Q ss_pred ecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe---CCCCcEEEeeccCcccc
Q 006907 380 YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILL---DESFEAVVGDFGLAKLL 456 (626)
Q Consensus 380 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl---~~~~~~ki~DfG~a~~~ 456 (626)
|+ +++|.+++... ...+++..++.++.||+.||.|||++ +|+||||||+|||+ +.++.+||+|||+++.+
T Consensus 84 ~~-g~sL~~ll~~~---~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~ 156 (483)
T 3sv0_A 84 LL-GPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKY 156 (483)
T ss_dssp CC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred CC-CCCHHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcceec
Confidence 99 99999999753 23599999999999999999999999 99999999999999 68899999999999876
Q ss_pred CCCCCce------eeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhcc
Q 006907 457 DRRDSHV------TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEER 530 (626)
Q Consensus 457 ~~~~~~~------~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~ 530 (626)
....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...........+......... .
T Consensus 157 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~-~ 235 (483)
T 3sv0_A 157 RDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVA-T 235 (483)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHH-S
T ss_pred cCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhcccc-c
Confidence 5543221 12456999999999999999999999999999999999999999865443322222221111110 0
Q ss_pred ccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhccc
Q 006907 531 RLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVE 582 (626)
Q Consensus 531 ~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~ 582 (626)
... .+. ...+.++.+++..||+.+|++||++.+|++.|+.++.
T Consensus 236 ~~~-----~l~----~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~ 278 (483)
T 3sv0_A 236 SIE-----ALC----RGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFI 278 (483)
T ss_dssp CHH-----HHH----TTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred cHH-----HHh----cCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 000 000 1124678999999999999999999999999998754
No 210
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=6.7e-40 Score=343.44 Aligned_cols=266 Identities=23% Similarity=0.324 Sum_probs=200.4
Q ss_pred hCCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCCcc-cHHHHHHHHHHHHhccCCcccceeeeeecC-----Cce
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNFT-GEVQFQTEVEMIGLALHRNLLRLYGFCMTP-----EER 374 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-----~~~ 374 (626)
.++|.+.+.||+|+||.||+|... +++.||||+++..... ....+.+|+++++.++||||+++++++... ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 457889999999999999999865 5889999999754322 344678999999999999999999988654 678
Q ss_pred EEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCcc
Q 006907 375 LLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAK 454 (626)
Q Consensus 375 ~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~ 454 (626)
++||||++ |+|.+++.. ..+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||++.
T Consensus 90 ~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVIST-----QMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLAR 160 (353)
T ss_dssp EEEECCCS-EEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEeccC-ccHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccccc
Confidence 99999997 599999875 2489999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCce---------eeeecccCCccCcccccc-CCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHH
Q 006907 455 LLDRRDSHV---------TTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVR 524 (626)
Q Consensus 455 ~~~~~~~~~---------~~~~~gt~~y~aPE~~~~-~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~ 524 (626)
......... .....||+.|+|||++.+ ..++.++||||||+++|||++|+.||...+.......+.....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 240 (353)
T 2b9h_A 161 IIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIG 240 (353)
T ss_dssp ECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHC
T ss_pred ccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhC
Confidence 765332111 122458999999998765 6789999999999999999999999986543222111111111
Q ss_pred Hhhhcccccccccc-------cc--CCC-----CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 525 TLHEERRLDVLIDR-------DL--KGS-----FDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 525 ~~~~~~~~~~~~~~-------~l--~~~-----~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
.............. .+ ... ..+..+.++.+++.+||+.||++|||++|+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 241 TPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp CCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 10000000000000 00 000 011335678999999999999999999999984
No 211
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=8.2e-40 Score=345.43 Aligned_cols=253 Identities=11% Similarity=-0.001 Sum_probs=182.1
Q ss_pred CCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCCcc---cHHHHHHHHHHHHhc--cCCccccee-------eeee
Q 006907 303 GNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNFT---GEVQFQTEVEMIGLA--LHRNLLRLY-------GFCM 369 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l--~h~nIv~l~-------~~~~ 369 (626)
.+|.+.+.||+|+||.||+|... +++.||+|+++..... ....+.+|+.+++.+ +||||++++ +++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 34778899999999999999864 6889999999876532 234577785555544 699988755 3333
Q ss_pred cC-----------------CceEEEEeecCCCChHHHHhhccCCCCCCCHHHH------HHHHHHHHHHHHHHHhcCCCC
Q 006907 370 TP-----------------EERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRR------MHIALGTARGLLYLHEQCNPK 426 (626)
Q Consensus 370 ~~-----------------~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~------~~i~~~i~~~l~yLH~~~~~~ 426 (626)
.+ ...++||||++ |+|.+++..... .+++..+ ..++.|++.||+|||++ +
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~---~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~ 214 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF---VYVFRGDEGILALHILTAQLIRLAANLQSK---G 214 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH---SCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc---ccchhhhhhhhhHHHHHHHHHHHHHHHHHC---C
Confidence 22 23799999998 899999986422 2455556 78889999999999999 9
Q ss_pred eEecCCCCCcEEeCCCCcEEEeeccCccccCCCCCceeeeecccCCccCcccccc--CCCCccchhHHHHHHHHHHHhCC
Q 006907 427 IIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLST--GQSSEKTDVFGFGVLLLELITGQ 504 (626)
Q Consensus 427 ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~t~~~DvwSlGvil~elltg~ 504 (626)
|+||||||+|||++.++.+||+|||++..... ......+|+.|+|||++.+ ..++.++|||||||++|||++|+
T Consensus 215 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~ 290 (371)
T 3q60_A 215 LVHGHFTPDNLFIMPDGRLMLGDVSALWKVGT----RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLF 290 (371)
T ss_dssp EEETTCSGGGEEECTTSCEEECCGGGEEETTC----EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSS
T ss_pred CccCcCCHHHEEECCCCCEEEEecceeeecCC----CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999986532 2223457799999999987 67999999999999999999999
Q ss_pred CcCCCCCcccccccHHHHHHHhhhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006907 505 KALDVGNGQVQKGMILDCVRTLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLK 575 (626)
Q Consensus 505 ~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 575 (626)
.||.......... ......................+..+.+++.+||+.||++|||+.|+++
T Consensus 291 ~Pf~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 291 LPFGLVTPGIKGS---------WKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp CSTTBCCTTCTTC---------CCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCCCCcCcccccc---------hhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 9998653221100 0000000000111111112244678999999999999999999999987
No 212
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=1.5e-39 Score=342.51 Aligned_cols=261 Identities=23% Similarity=0.298 Sum_probs=186.7
Q ss_pred hCCCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCCc--ccHHHHHHHHHHHHhccCCcccceeeeeecC------C
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPNF--TGEVQFQTEVEMIGLALHRNLLRLYGFCMTP------E 372 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~------~ 372 (626)
.++|.+.+.||+|+||.||+|.. .+++.||||++..... .....+.+|+++++.++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 35788899999999999999985 5688999999975432 2345688999999999999999999998654 5
Q ss_pred ceEEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccC
Q 006907 373 ERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGL 452 (626)
Q Consensus 373 ~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~ 452 (626)
..++|+||+ +++|.+++.. ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~ 178 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGL 178 (367)
T ss_dssp CCEEEEECC-CEECC----------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC---
T ss_pred eEEEEeccc-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeeccc
Confidence 679999999 7899998864 3589999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCceeeeecccCCccCcccccc-CCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccc
Q 006907 453 AKLLDRRDSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERR 531 (626)
Q Consensus 453 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~ 531 (626)
++..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+.+...+...+....+....+.
T Consensus 179 a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~- 253 (367)
T 2fst_X 179 ARHTADE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL- 253 (367)
T ss_dssp ----------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHH-
T ss_pred ccccccc----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHH-
Confidence 9865432 233468999999999977 6789999999999999999999999987654433333332221111100
Q ss_pred cccccc-------ccc--CCCCC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 532 LDVLID-------RDL--KGSFD-----PTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 532 ~~~~~~-------~~l--~~~~~-----~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
...+.. ..+ ....+ ...++.+.+|+.+||+.||++|||+.|+++.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 254 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 000000 000 00000 1224678999999999999999999999984
No 213
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=2.2e-39 Score=355.20 Aligned_cols=250 Identities=25% Similarity=0.344 Sum_probs=198.0
Q ss_pred CCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCC--cccHHHHHHHHHHHHhccCCcccceeeeeecCCceEEEEe
Q 006907 303 GNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPN--FTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYP 379 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E 379 (626)
+.|.+.+.||+|+||.||+|... ++..||+|+++... ......+.+|+.+++.++||||+++++++.+....++|||
T Consensus 37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 116 (494)
T 3lij_A 37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME 116 (494)
T ss_dssp HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence 35888999999999999999864 57899999997653 2234578999999999999999999999999999999999
Q ss_pred ecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC---CCcEEEeeccCcccc
Q 006907 380 YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDE---SFEAVVGDFGLAKLL 456 (626)
Q Consensus 380 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~---~~~~ki~DfG~a~~~ 456 (626)
|+++|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||++...
T Consensus 117 ~~~~g~L~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~ 189 (494)
T 3lij_A 117 CYKGGELFDEIIHR----MKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF 189 (494)
T ss_dssp CCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred cCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeEC
Confidence 99999999998754 2489999999999999999999999 9999999999999975 455999999999876
Q ss_pred CCCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhcccccccc
Q 006907 457 DRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLI 536 (626)
Q Consensus 457 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 536 (626)
.... ......||+.|+|||++. ..++.++||||+||++|+|++|+.||....... +. ........ . ..
T Consensus 190 ~~~~--~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~----~~---~~i~~~~~-~-~~ 257 (494)
T 3lij_A 190 ENQK--KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQE----IL---RKVEKGKY-T-FD 257 (494)
T ss_dssp BTTB--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HH---HHHHHTCC-C-CC
T ss_pred CCCc--cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHH----HH---HHHHhCCC-C-CC
Confidence 5432 223456999999999986 568999999999999999999999997544221 11 11111100 0 00
Q ss_pred ccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 537 DRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 537 ~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
.+. ....+..+.+++.+||+.||++|||+.|+++.
T Consensus 258 ~~~-----~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 258 SPE-----WKNVSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp SGG-----GTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred chh-----cccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 000 01234678999999999999999999999874
No 214
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=1.5e-39 Score=339.09 Aligned_cols=256 Identities=21% Similarity=0.317 Sum_probs=200.6
Q ss_pred HhCCCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCCcc-cHHHHHHHHHH-HHhccCCcccceeeeeecCCceEEE
Q 006907 301 ATGNFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPNFT-GEVQFQTEVEM-IGLALHRNLLRLYGFCMTPEERLLV 377 (626)
Q Consensus 301 ~~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~-l~~l~h~nIv~l~~~~~~~~~~~lv 377 (626)
..++|.+.+.||+|+||.||+|.. .+++.||||+++..... ...++..|..+ ++.++||||+++++++.+.+..++|
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 128 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 128 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEE
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEE
Confidence 456788889999999999999986 56889999999765332 33445556555 6778999999999999999999999
Q ss_pred EeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccC
Q 006907 378 YPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLD 457 (626)
Q Consensus 378 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~ 457 (626)
|||+++ +|.+++.........+++..+..++.|++.||.|||++. +|+||||||+||+++.++.+||+|||++....
T Consensus 129 ~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 205 (340)
T 3an0_A 129 MELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLV 205 (340)
T ss_dssp ECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCSHHHHHS
T ss_pred HHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCCCceecc
Confidence 999975 999998764444567999999999999999999999742 89999999999999999999999999998764
Q ss_pred CCCCceeeeecccCCccCccccc----cCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccccc
Q 006907 458 RRDSHVTTAVRGTVGHIAPEYLS----TGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLD 533 (626)
Q Consensus 458 ~~~~~~~~~~~gt~~y~aPE~~~----~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~ 533 (626)
.. .......||+.|+|||++. ...++.++||||||+++|||++|+.||....... .............
T Consensus 206 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~------~~~~~~~~~~~~~ 277 (340)
T 3an0_A 206 DS--VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPF------QQLKQVVEEPSPQ 277 (340)
T ss_dssp CH--HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHH------HHHHHHHHSCCCC
T ss_pred cc--cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchH------HHHHHHhcCCCCC
Confidence 32 1122345899999999974 3468999999999999999999999997532211 1111111111100
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 534 VLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 534 ~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
......+.++.+++.+||+.||++|||+.|+++.
T Consensus 278 ---------~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 311 (340)
T 3an0_A 278 ---------LPADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 311 (340)
T ss_dssp ---------CCGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred ---------CCcccCCHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 0011235779999999999999999999999873
No 215
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=9.7e-40 Score=338.34 Aligned_cols=259 Identities=27% Similarity=0.401 Sum_probs=200.0
Q ss_pred chHHHHHHhCCCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCCcccHHHHHHHHHHHHhc-cCCcccceeeeeec-
Q 006907 294 SFRELQIATGNFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLA-LHRNLLRLYGFCMT- 370 (626)
Q Consensus 294 ~~~~~~~~~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~- 370 (626)
.+.++....++|.+.+.||+|+||.||+|.. .+++.||+|++.... .....+.+|+.+++++ +||||+++++++..
T Consensus 15 ~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 93 (326)
T 2x7f_A 15 DLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKK 93 (326)
T ss_dssp -CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEEC
T ss_pred cchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeec
Confidence 3344445677899999999999999999986 468899999987543 3346788999999998 79999999999976
Q ss_pred -----CCceEEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcE
Q 006907 371 -----PEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEA 445 (626)
Q Consensus 371 -----~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ 445 (626)
....++||||+++|+|.+++.... ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+
T Consensus 94 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~ 168 (326)
T 2x7f_A 94 NPPGMDDQLWLVMEFCGAGSVTDLIKNTK--GNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEV 168 (326)
T ss_dssp C--CCCCEEEEEEECCTTEEHHHHHHHSG--GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCE
T ss_pred cCccccceEEEEEEcCCCCcHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCE
Confidence 467899999999999999997642 23589999999999999999999999 99999999999999999999
Q ss_pred EEeeccCccccCCCCCceeeeecccCCccCccccc-----cCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHH
Q 006907 446 VVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLS-----TGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMIL 520 (626)
Q Consensus 446 ki~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~ 520 (626)
||+|||++........ ......||+.|+|||.+. +..++.++||||||+++|+|++|+.||.......
T Consensus 169 kl~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------ 241 (326)
T 2x7f_A 169 KLVDFGVSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR------ 241 (326)
T ss_dssp EECCCTTTC--------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH------
T ss_pred EEeeCcCceecCcCcc-ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH------
Confidence 9999999986643222 223345899999999997 5678999999999999999999999997543211
Q ss_pred HHHHHhhhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006907 521 DCVRTLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLK 575 (626)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 575 (626)
.......... ... .....+..+.+++.+||+.||++|||+.|+++
T Consensus 242 -~~~~~~~~~~-~~~--------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 242 -ALFLIPRNPA-PRL--------KSKKWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp -HHHHHHHSCC-CCC--------SCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred -HHHHhhcCcc-ccC--------CccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 1111111110 000 11123467899999999999999999999988
No 216
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=1.9e-39 Score=339.35 Aligned_cols=259 Identities=19% Similarity=0.281 Sum_probs=204.2
Q ss_pred hCCCCcCceeccCCCceEEEEEeCCccEEEEEEecCCCccc-----------------HHHHHHHHHHHHhccCCcccce
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTG-----------------EVQFQTEVEMIGLALHRNLLRL 364 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~E~~~l~~l~h~nIv~l 364 (626)
.++|.+.+.||+|+||.||+|.. +++.||+|++....... ...+.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 45788999999999999999998 88999999986432111 1678999999999999999999
Q ss_pred eeeeecCCceEEEEeecCCCChHHH------HhhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEecCCCCCcE
Q 006907 365 YGFCMTPEERLLVYPYMPNGSVADC------LRDTRQAKPPLDWNRRMHIALGTARGLLYLHE-QCNPKIIHRDVKAANI 437 (626)
Q Consensus 365 ~~~~~~~~~~~lv~E~~~~gsL~~~------l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~-~~~~~ivH~Dlkp~NI 437 (626)
++++.+.+..++||||+++|+|.++ +.. .....+++..+..++.|++.||.|||+ . +|+||||||+||
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Ni 183 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDK--NYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNI 183 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCS--SSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhh--ccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhE
Confidence 9999999999999999999999998 432 224569999999999999999999999 8 999999999999
Q ss_pred EeCCCCcEEEeeccCccccCCCCCceeeeecccCCccCccccccC-CCCc-cchhHHHHHHHHHHHhCCCcCCCCCcccc
Q 006907 438 LLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTG-QSSE-KTDVFGFGVLLLELITGQKALDVGNGQVQ 515 (626)
Q Consensus 438 Ll~~~~~~ki~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~-~~DvwSlGvil~elltg~~p~~~~~~~~~ 515 (626)
+++.++.+||+|||.+...... ......||+.|+|||.+.+. .++. ++||||||+++|||++|+.||......
T Consensus 184 l~~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-- 258 (348)
T 2pml_X 184 LMDKNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL-- 258 (348)
T ss_dssp EECTTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS--
T ss_pred EEcCCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH--
Confidence 9999999999999999876432 33445689999999999877 5666 999999999999999999999854431
Q ss_pred cccHHHHHHHhhhccccccccc------c---ccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 516 KGMILDCVRTLHEERRLDVLID------R---DLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 516 ~~~i~~~~~~~~~~~~~~~~~~------~---~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
..+... .... ......+ + ..........+..+.+++.+||+.||.+|||+.|+++.
T Consensus 259 -~~~~~~---i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 259 -VELFNN---IRTK-NIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp -HHHHHH---HTSC-CCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred -HHHHHH---Hhcc-CcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 111111 1111 0000000 0 00000113345788999999999999999999999984
No 217
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=2.4e-38 Score=322.31 Aligned_cols=247 Identities=25% Similarity=0.396 Sum_probs=196.9
Q ss_pred CCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCCc--ccHHHHHHHHHHHHhccCCcccceeeeeec----CCceEE
Q 006907 304 NFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPNF--TGEVQFQTEVEMIGLALHRNLLRLYGFCMT----PEERLL 376 (626)
Q Consensus 304 ~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~----~~~~~l 376 (626)
.|.+.+.||+|+||.||+|.. .++..||+|.+..... .....+.+|+.+++.++||||+++++++.. ....++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 366778999999999999986 4578899999875432 234568899999999999999999998865 345799
Q ss_pred EEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCcEEeC-CCCcEEEeeccCc
Q 006907 377 VYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPK--IIHRDVKAANILLD-ESFEAVVGDFGLA 453 (626)
Q Consensus 377 v~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~--ivH~Dlkp~NILl~-~~~~~ki~DfG~a 453 (626)
||||+++|+|.+++... ..+++..+..++.|++.||.|||+. + |+||||||+||+++ +++.+||+|||++
T Consensus 107 v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~ 179 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKRF----KVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLA 179 (290)
T ss_dssp EEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTGG
T ss_pred EEEecCCCCHHHHHHHc----cCCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCCc
Confidence 99999999999999764 2489999999999999999999998 7 99999999999998 7899999999999
Q ss_pred cccCCCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccccc
Q 006907 454 KLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLD 533 (626)
Q Consensus 454 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~ 533 (626)
...... ......||+.|+|||.+. +.++.++||||||+++|+|++|+.||....... .............
T Consensus 180 ~~~~~~---~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~------~~~~~~~~~~~~~ 249 (290)
T 1t4h_A 180 TLKRAS---FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAA------QIYRRVTSGVKPA 249 (290)
T ss_dssp GGCCTT---SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHH------HHHHHHTTTCCCG
T ss_pred cccccc---ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHH------HHHHHHhccCCcc
Confidence 754432 223445899999999886 458999999999999999999999997543211 1111111111100
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 534 VLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 534 ~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
. ++...++++.+++.+||+.||++|||+.|+++.
T Consensus 250 -----~----~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 250 -----S----FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp -----G----GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred -----c----cCCCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 0 111123578999999999999999999999874
No 218
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=4.5e-39 Score=339.76 Aligned_cols=269 Identities=22% Similarity=0.276 Sum_probs=196.2
Q ss_pred CCCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCCc--ccHHHHHHHHHHHHhccCCcccceeeeeecCC------c
Q 006907 303 GNFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPNF--TGEVQFQTEVEMIGLALHRNLLRLYGFCMTPE------E 373 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~------~ 373 (626)
++|.+.+.||+|+||.||+|.. .+++.||||++..... .....+.+|+.+++.++||||+++++++.... .
T Consensus 25 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 104 (371)
T 2xrw_A 25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD 104 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCE
T ss_pred hheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccc
Confidence 5788899999999999999985 4588999999975432 22346889999999999999999999997665 6
Q ss_pred eEEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCc
Q 006907 374 RLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLA 453 (626)
Q Consensus 374 ~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a 453 (626)
.++||||+++ +|.+++.. .+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||++
T Consensus 105 ~~lv~e~~~~-~l~~~~~~------~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 174 (371)
T 2xrw_A 105 VYIVMELMDA-NLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLA 174 (371)
T ss_dssp EEEEEECCSE-EHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC-
T ss_pred eEEEEEcCCC-CHHHHHhh------ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeecc
Confidence 7999999975 78888852 388999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHH-----------
Q 006907 454 KLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDC----------- 522 (626)
Q Consensus 454 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~----------- 522 (626)
....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...+.......+...
T Consensus 175 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 252 (371)
T 2xrw_A 175 RTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKK 252 (371)
T ss_dssp -----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTT
T ss_pred ccccccc--ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHH
Confidence 8654321 223456899999999999999999999999999999999999999865432221111100
Q ss_pred ----HHHhhhccc------cccccccccCCC---CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHhhcccc
Q 006907 523 ----VRTLHEERR------LDVLIDRDLKGS---FDPTELEKMVQLALQCTQSHPNLRPKMSEVLK--VLEVLVEP 583 (626)
Q Consensus 523 ----~~~~~~~~~------~~~~~~~~l~~~---~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~--~L~~l~~~ 583 (626)
......... ............ .....+..+.+|+.+||+.||++|||++|+++ .+..+..+
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~~~ 328 (371)
T 2xrw_A 253 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDP 328 (371)
T ss_dssp SCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTTCCH
T ss_pred hhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhhhcCc
Confidence 000000000 000000000000 11234678999999999999999999999998 44444433
No 219
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=3.2e-39 Score=354.83 Aligned_cols=251 Identities=24% Similarity=0.320 Sum_probs=200.2
Q ss_pred hCCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCCc-------------ccHHHHHHHHHHHHhccCCcccceeee
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNF-------------TGEVQFQTEVEMIGLALHRNLLRLYGF 367 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~h~nIv~l~~~ 367 (626)
.++|.+.++||+|+||+||+|... ++..||+|+++.... .....+.+|+.+++.++||||++++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 457889999999999999999864 578999999975432 224568899999999999999999999
Q ss_pred eecCCceEEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCC---c
Q 006907 368 CMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESF---E 444 (626)
Q Consensus 368 ~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~---~ 444 (626)
+.+....++||||+++|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++ .
T Consensus 115 ~~~~~~~~lv~e~~~gg~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~ 187 (504)
T 3q5i_A 115 FEDKKYFYLVTEFYEGGELFEQIINRH----KFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLN 187 (504)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSS
T ss_pred EEcCCEEEEEEecCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCcc
Confidence 999999999999999999999997642 489999999999999999999999 999999999999998765 6
Q ss_pred EEEeeccCccccCCCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHH
Q 006907 445 AVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVR 524 (626)
Q Consensus 445 ~ki~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~ 524 (626)
+||+|||++....... ......||+.|+|||++. +.++.++||||+||++|+|++|+.||....... +. .
T Consensus 188 ~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~----~~---~ 257 (504)
T 3q5i_A 188 IKIVDFGLSSFFSKDY--KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQD----II---K 257 (504)
T ss_dssp EEECCCTTCEECCTTS--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HH---H
T ss_pred EEEEECCCCEEcCCCC--ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH----HH---H
Confidence 9999999998765432 223445999999999986 468999999999999999999999997644221 11 1
Q ss_pred HhhhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 525 TLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 525 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
....... . ...... ...+.++.+++.+||+.||++|||++|+++.
T Consensus 258 ~i~~~~~-~--~~~~~~----~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 258 KVEKGKY-Y--FDFNDW----KNISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp HHHHCCC-C--CCHHHH----TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHcCCC-C--CCcccc----CCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 1111100 0 000000 1124678999999999999999999999874
No 220
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=2.5e-39 Score=354.18 Aligned_cols=251 Identities=24% Similarity=0.317 Sum_probs=201.9
Q ss_pred hCCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCC--cccHHHHHHHHHHHHhccCCcccceeeeeecCCceEEEE
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPN--FTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVY 378 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 378 (626)
.++|.+.++||+|+||+||++... +++.||||++.... ......+.+|++++++++||||+++++++.+....++||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 346889999999999999999864 68899999986432 233567899999999999999999999999999999999
Q ss_pred eecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeC---CCCcEEEeeccCccc
Q 006907 379 PYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLD---ESFEAVVGDFGLAKL 455 (626)
Q Consensus 379 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~---~~~~~ki~DfG~a~~ 455 (626)
||+++|+|.+++.... .+++..+..++.|++.||.|||++ +|+||||||+|||++ .++.+||+|||++..
T Consensus 101 e~~~~~~L~~~~~~~~----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 173 (486)
T 3mwu_A 101 ELYTGGELFDEIIKRK----RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173 (486)
T ss_dssp CCCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTT
T ss_pred EcCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCeE
Confidence 9999999999987642 489999999999999999999999 999999999999995 566799999999987
Q ss_pred cCCCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccccccc
Q 006907 456 LDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVL 535 (626)
Q Consensus 456 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 535 (626)
..... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||....... +. ...........
T Consensus 174 ~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~----~~---~~i~~~~~~~~- 242 (486)
T 3mwu_A 174 FQQNT--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD----IL---KRVETGKYAFD- 242 (486)
T ss_dssp BCCC------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HH---HHHHHTCCCSC-
T ss_pred CCCCC--ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH----HH---HHHHhCCCCCC-
Confidence 65432 2234469999999999975 58999999999999999999999997544221 11 11111110000
Q ss_pred cccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 536 IDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 536 ~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
.......+..+.+++.+||+.||++|||+.|+++.
T Consensus 243 ------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 243 ------LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp ------SGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred ------CcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00012234678999999999999999999999984
No 221
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=1e-38 Score=327.40 Aligned_cols=251 Identities=21% Similarity=0.284 Sum_probs=199.2
Q ss_pred hCCCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCC----cccHHHHHHHHHHHHhccCCcccceeeeee--cCCce
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPN----FTGEVQFQTEVEMIGLALHRNLLRLYGFCM--TPEER 374 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~--~~~~~ 374 (626)
.++|.+.+.||+|+||.||++.. .++..||+|+++... ......+.+|+++++.++||||+++++++. +....
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 36799999999999999999986 457899999997532 223467899999999999999999999984 45678
Q ss_pred EEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCcc
Q 006907 375 LLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAK 454 (626)
Q Consensus 375 ~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~ 454 (626)
++||||++++ |.+++.... ...+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||++.
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~ 157 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVP--EKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAE 157 (305)
T ss_dssp EEEEECCSEE-HHHHHHHST--TCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEEehhccCC-HHHHHHhCc--ccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeecccccc
Confidence 9999999876 777776532 34689999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCC-ceeeeecccCCccCccccccCC--CCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccc
Q 006907 455 LLDRRDS-HVTTAVRGTVGHIAPEYLSTGQ--SSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERR 531 (626)
Q Consensus 455 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~--~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~ 531 (626)
....... .......||+.|+|||++.+.. ++.++||||||+++|||++|+.||...... ..........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------~~~~~i~~~~- 229 (305)
T 2wtk_C 158 ALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIY-------KLFENIGKGS- 229 (305)
T ss_dssp ECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHH-------HHHHHHHHCC-
T ss_pred ccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHH-------HHHHHHhcCC-
Confidence 7653322 2223445899999999997654 378999999999999999999999754321 1111111110
Q ss_pred cccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 532 LDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 532 ~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
...+...+..+.+++.+||+.||++|||+.|+++.
T Consensus 230 ----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 230 ----------YAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp ----------CCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred ----------CCCCCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 01222344678899999999999999999999984
No 222
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=1.1e-38 Score=339.24 Aligned_cols=265 Identities=19% Similarity=0.227 Sum_probs=203.4
Q ss_pred hCCCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCCcccHHHHHHHHHHHHhcc--------CCcccceeeeee---
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLAL--------HRNLLRLYGFCM--- 369 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------h~nIv~l~~~~~--- 369 (626)
.++|.+.++||+|+||+||+|.. .+++.||||+++... .....+.+|+++++.++ |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE-HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCC-cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 46789999999999999999985 558899999997532 23456889999999886 788999999987
Q ss_pred -cCCceEEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCC-----
Q 006907 370 -TPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESF----- 443 (626)
Q Consensus 370 -~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~----- 443 (626)
+....++||||+ +++|.+++... ....+++..+..++.|++.||.|||+++ +|+||||||+|||++.++
T Consensus 115 ~~~~~~~lv~e~~-~~~l~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~~~ 189 (397)
T 1wak_A 115 VNGTHICMVFEVL-GHHLLKWIIKS--NYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIRR 189 (397)
T ss_dssp TTEEEEEEEECCC-CCBHHHHHHHT--TTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHHHH
T ss_pred CCCceEEEEEecc-CccHHHHHHhc--ccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhhhh
Confidence 556789999999 56777776543 2245899999999999999999999864 799999999999999775
Q ss_pred --------------------------------------------cEEEeeccCccccCCCCCceeeeecccCCccCcccc
Q 006907 444 --------------------------------------------EAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYL 479 (626)
Q Consensus 444 --------------------------------------------~~ki~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~ 479 (626)
.+||+|||++...... .....||+.|+|||++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~y~aPE~~ 265 (397)
T 1wak_A 190 LAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQYRSLEVL 265 (397)
T ss_dssp HHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGGGCCHHHH
T ss_pred hhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCCCcccCChhh
Confidence 7999999999876432 2234589999999999
Q ss_pred ccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHH--HHHHhhh---------cccccccccc--------c-
Q 006907 480 STGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILD--CVRTLHE---------ERRLDVLIDR--------D- 539 (626)
Q Consensus 480 ~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~--~~~~~~~---------~~~~~~~~~~--------~- 539 (626)
.+..++.++|||||||++|||++|+.||.............. ....... .......... .
T Consensus 266 ~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (397)
T 1wak_A 266 IGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKL 345 (397)
T ss_dssp HTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCC
T ss_pred cCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcccccccccc
Confidence 999999999999999999999999999986554322111111 0000000 0000000000 0
Q ss_pred ----------cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 540 ----------LKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 540 ----------l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
-....+...+..+.+|+.+||+.||++|||++|+++.
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 346 KPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp CCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred CCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 0113457778899999999999999999999999874
No 223
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=1.3e-39 Score=356.37 Aligned_cols=251 Identities=24% Similarity=0.308 Sum_probs=204.7
Q ss_pred hCCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCC---cccHHHHHHHHHHHHhccCCcccceeeeeecCCceEEE
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPN---FTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLV 377 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv 377 (626)
.++|.+.++||+|+||.||++... +++.||||++.... ......+.+|++++++++||||+++++++.+....++|
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 346888999999999999999865 68899999996543 23456789999999999999999999999999999999
Q ss_pred EeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe---CCCCcEEEeeccCcc
Q 006907 378 YPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILL---DESFEAVVGDFGLAK 454 (626)
Q Consensus 378 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl---~~~~~~ki~DfG~a~ 454 (626)
|||+++|+|.+++... ..+++..+..++.|++.||.|||++ +|+||||||+|||+ +.++.+||+|||++.
T Consensus 105 ~e~~~~~~L~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 177 (484)
T 3nyv_A 105 GEVYTGGELFDEIISR----KRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLST 177 (484)
T ss_dssp ECCCCSCBHHHHHHTC----SCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHH
T ss_pred EecCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeE
Confidence 9999999999999753 3589999999999999999999999 99999999999999 567899999999998
Q ss_pred ccCCCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhcccccc
Q 006907 455 LLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDV 534 (626)
Q Consensus 455 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 534 (626)
....... .....||+.|+|||++.+ .++.++||||+||++|+|++|+.||....... +. ...........
T Consensus 178 ~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~----~~---~~i~~~~~~~~ 247 (484)
T 3nyv_A 178 HFEASKK--MKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYD----IL---KKVEKGKYTFE 247 (484)
T ss_dssp HBCCCCS--HHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HH---HHHHHCCCCCC
T ss_pred Ecccccc--cccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHH----HH---HHHHcCCCCCC
Confidence 7654332 233459999999999966 68999999999999999999999997544221 11 11111110000
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 535 LIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 535 ~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
.......++.+.+++.+||+.||++|||+.|+++.
T Consensus 248 -------~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 248 -------LPQWKKVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp -------SGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred -------CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 00012235778999999999999999999999984
No 224
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=1.3e-38 Score=325.48 Aligned_cols=252 Identities=24% Similarity=0.296 Sum_probs=203.2
Q ss_pred hCCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCCc---------ccHHHHHHHHHHHHhcc-CCcccceeeeeec
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNF---------TGEVQFQTEVEMIGLAL-HRNLLRLYGFCMT 370 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---------~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~ 370 (626)
.++|.+.+.||+|+||.||+|... +++.||+|+++.... .....+.+|+++++++. ||||+++++++.+
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 467889999999999999999864 578999999975431 11245788999999996 9999999999999
Q ss_pred CCceEEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeec
Q 006907 371 PEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDF 450 (626)
Q Consensus 371 ~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~Df 450 (626)
....++||||+++++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+||
T Consensus 96 ~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~df 168 (298)
T 1phk_A 96 NTFFFLVFDLMKKGELFDYLTEK----VTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDF 168 (298)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCC
T ss_pred CCeEEEEEeccCCCcHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEecc
Confidence 99999999999999999999763 3489999999999999999999999 9999999999999999999999999
Q ss_pred cCccccCCCCCceeeeecccCCccCccccc------cCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHH
Q 006907 451 GLAKLLDRRDSHVTTAVRGTVGHIAPEYLS------TGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVR 524 (626)
Q Consensus 451 G~a~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~ 524 (626)
|++........ .....||+.|+|||++. ...++.++||||||+++|||++|+.||....... ...
T Consensus 169 g~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-------~~~ 239 (298)
T 1phk_A 169 GFSCQLDPGEK--LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML-------MLR 239 (298)
T ss_dssp TTCEECCTTCC--BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-------HHH
T ss_pred cchhhcCCCcc--cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHH-------HHH
Confidence 99987654322 23345899999999985 4568899999999999999999999997543211 111
Q ss_pred HhhhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 525 TLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 525 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
....... . .........+..+.+++.+||+.||++|||+.|+++.
T Consensus 240 ~~~~~~~-~------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (298)
T 1phk_A 240 MIMSGNY-Q------FGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH 284 (298)
T ss_dssp HHHHTCC-C------CCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred HHhcCCc-c------cCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhC
Confidence 1111110 0 0001112345779999999999999999999999873
No 225
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=7.4e-40 Score=338.04 Aligned_cols=263 Identities=24% Similarity=0.379 Sum_probs=202.1
Q ss_pred HHHHHHhCCCCcCceeccCCCceEEEEEeCCccEEEEEEecCCCc--ccHHHHHHHHHHHHhccCCcccceeeeeecCCc
Q 006907 296 RELQIATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNF--TGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEE 373 (626)
Q Consensus 296 ~~~~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 373 (626)
++..+..++|.+.+.||+|+||.||+|...+ .+|+|+++.... .....+.+|+.++++++||||+++++++.+...
T Consensus 26 ~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 103 (319)
T 2y4i_B 26 QEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPH 103 (319)
T ss_dssp GGSSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSC
T ss_pred ccccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCc
Confidence 3344456788999999999999999998754 389999875432 223457889999999999999999999999999
Q ss_pred eEEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCc
Q 006907 374 RLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLA 453 (626)
Q Consensus 374 ~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a 453 (626)
.++||||+++++|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+||+++ ++.+||+|||++
T Consensus 104 ~~iv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~ 176 (319)
T 2y4i_B 104 LAIITSLCKGRTLYSVVRDA---KIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLF 176 (319)
T ss_dssp EEEECBCCCSEEHHHHTTSS---CCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCC
T ss_pred eEEEeecccCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCc
Confidence 99999999999999999753 34589999999999999999999999 999999999999998 679999999998
Q ss_pred cccCCCC----CceeeeecccCCccCcccccc---------CCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHH
Q 006907 454 KLLDRRD----SHVTTAVRGTVGHIAPEYLST---------GQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMIL 520 (626)
Q Consensus 454 ~~~~~~~----~~~~~~~~gt~~y~aPE~~~~---------~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~ 520 (626)
....... ........||+.|+|||.+.+ ..++.++||||||+++|||++|+.||.......
T Consensus 177 ~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~------ 250 (319)
T 2y4i_B 177 SISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEA------ 250 (319)
T ss_dssp C----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHH------
T ss_pred cccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH------
Confidence 7543211 111223448999999999964 357899999999999999999999997543211
Q ss_pred HHHHHhhhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccc
Q 006907 521 DCVRTLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEP 583 (626)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~ 583 (626)
.......... .... ....+..+.+++.+||+.||++|||+.++++.|+.+...
T Consensus 251 -~~~~~~~~~~-~~~~--------~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~ 303 (319)
T 2y4i_B 251 -IIWQMGTGMK-PNLS--------QIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKR 303 (319)
T ss_dssp -HHHHHHTTCC-CCCC--------CSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC---
T ss_pred -HHHHhccCCC-CCCC--------cCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence 1111111111 0000 011235688999999999999999999999999998765
No 226
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=1.1e-38 Score=331.51 Aligned_cols=264 Identities=20% Similarity=0.264 Sum_probs=204.7
Q ss_pred hCCCCcCceeccCCCceEEEEEe--CCccEEEEEEecCCCcccHHHHHHHHHHHHhccCCc------ccceeeeeecCCc
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCL--PNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRN------LLRLYGFCMTPEE 373 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------Iv~l~~~~~~~~~ 373 (626)
.++|.+.+.||+|+||.||+|.. .+++.||+|+++... .....+.+|+++++.++|++ ++++++++.+.+.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 45788999999999999999985 367899999997532 23456888999999888765 9999999999999
Q ss_pred eEEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC------------
Q 006907 374 RLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDE------------ 441 (626)
Q Consensus 374 ~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~------------ 441 (626)
.++||||+ +++|.+++.... ..++++..+..++.|++.||+|||++ +|+||||||+||+++.
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~~~ 165 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKENG--FLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIK 165 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC----
T ss_pred EEEEEcCC-CCCHHHHHHhcC--CCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCccc
Confidence 99999999 889999997632 34589999999999999999999999 9999999999999987
Q ss_pred -------CCcEEEeeccCccccCCCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCccc
Q 006907 442 -------SFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQV 514 (626)
Q Consensus 442 -------~~~~ki~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~ 514 (626)
++.+||+|||++....... ....||+.|+|||++.+..++.++||||||+++|||++|+.||...+...
T Consensus 166 ~~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~ 241 (339)
T 1z57_A 166 RDERTLINPDIKVVDFGSATYDDEHH----STLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKE 241 (339)
T ss_dssp CEEEEESCCCEEECCCSSCEETTSCC----CSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHH
T ss_pred cccccccCCCceEeeCcccccCcccc----ccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHH
Confidence 6789999999998654322 23458999999999999999999999999999999999999998654332
Q ss_pred ccccHHHHHHHhhhc----ccccccc---------------------cc-ccCCCCCHHHHHHHHHHHHHccCCCCCCCC
Q 006907 515 QKGMILDCVRTLHEE----RRLDVLI---------------------DR-DLKGSFDPTELEKMVQLALQCTQSHPNLRP 568 (626)
Q Consensus 515 ~~~~i~~~~~~~~~~----~~~~~~~---------------------~~-~l~~~~~~~~~~~l~~l~~~cl~~~P~~RP 568 (626)
....+.......... ....... .+ .-........+..+.+++.+||+.||++||
T Consensus 242 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rp 321 (339)
T 1z57_A 242 HLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRI 321 (339)
T ss_dssp HHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSC
T ss_pred HHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCccccc
Confidence 221111111100000 0000000 00 000112345678899999999999999999
Q ss_pred CHHHHHHH
Q 006907 569 KMSEVLKV 576 (626)
Q Consensus 569 s~~evl~~ 576 (626)
|++|+++.
T Consensus 322 t~~ell~h 329 (339)
T 1z57_A 322 TLREALKH 329 (339)
T ss_dssp CHHHHTTS
T ss_pred CHHHHhcC
Confidence 99999874
No 227
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.9e-39 Score=334.79 Aligned_cols=266 Identities=24% Similarity=0.360 Sum_probs=194.8
Q ss_pred hCCCCcCceeccCCCceEEEEEeCC-ccEEEEEEecCCCcccHHHHHHHHHHHHhccCCcccceeeeee-----------
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCLPN-RMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCM----------- 369 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~----------- 369 (626)
.++|.+.+.||+|+||.||+|.... ++.||+|++..........+.+|+++++.++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 3578889999999999999998754 8899999998665555567899999999999999999999874
Q ss_pred ---cCCceEEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeC-CCCcE
Q 006907 370 ---TPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLD-ESFEA 445 (626)
Q Consensus 370 ---~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~-~~~~~ 445 (626)
+....++||||++ |+|.+++.. ..+++..+..++.|++.||+|||++ +|+||||||+||+++ +++.+
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~ 160 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQ-----GPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVL 160 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEE
T ss_pred cccccCceeEEeeccC-CCHHHHhhc-----CCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeE
Confidence 3456799999997 699999863 3589999999999999999999999 999999999999997 67799
Q ss_pred EEeeccCccccCCCCCc--eeeeecccCCccCcccccc-CCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHH
Q 006907 446 VVGDFGLAKLLDRRDSH--VTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDC 522 (626)
Q Consensus 446 ki~DfG~a~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~ 522 (626)
||+|||++......... ......+|..|+|||.+.+ ..++.++||||||+++|||++|+.||...........+...
T Consensus 161 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~ 240 (320)
T 2i6l_A 161 KIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILES 240 (320)
T ss_dssp EECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHH
T ss_pred EEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 99999999876432211 1223447899999998865 67899999999999999999999999865432221111111
Q ss_pred HHHhhhc------cccccccccccC-CC-----CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 523 VRTLHEE------RRLDVLIDRDLK-GS-----FDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 523 ~~~~~~~------~~~~~~~~~~l~-~~-----~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
......+ ............ .. ..+..+.++.+++.+||+.||++|||++|+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 241 IPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp SCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred cCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 0000000 000000000000 00 011235789999999999999999999999883
No 228
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=2.5e-39 Score=333.44 Aligned_cols=256 Identities=20% Similarity=0.299 Sum_probs=198.8
Q ss_pred HHHHHhCCCCcCceeccCCCceEEEEEeCCccEEEEEEecCCCcc--cHHHHHHHHHHHHhcc--CCcccceeeeeecCC
Q 006907 297 ELQIATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFT--GEVQFQTEVEMIGLAL--HRNLLRLYGFCMTPE 372 (626)
Q Consensus 297 ~~~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~--h~nIv~l~~~~~~~~ 372 (626)
.+....++|.+.+.||+|+||.||++...+++.||+|++...... ....+.+|++++.+++ ||||+++++++.+..
T Consensus 22 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~ 101 (313)
T 3cek_A 22 SMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ 101 (313)
T ss_dssp EEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSS
T ss_pred eeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCC
Confidence 334455678899999999999999999888999999999754322 3456899999999997 599999999999999
Q ss_pred ceEEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccC
Q 006907 373 ERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGL 452 (626)
Q Consensus 373 ~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~ 452 (626)
..++||| +.+++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||++++ +.+||+|||+
T Consensus 102 ~~~lv~e-~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~ 172 (313)
T 3cek_A 102 YIYMVME-CGNIDLNSWLKKK----KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGI 172 (313)
T ss_dssp EEEEEEC-CCSEEHHHHHHHC----SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSS
T ss_pred EEEEEEe-cCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeeccc
Confidence 9999999 5688999999763 3589999999999999999999999 9999999999999965 7999999999
Q ss_pred ccccCCCCCc-eeeeecccCCccCcccccc-----------CCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHH
Q 006907 453 AKLLDRRDSH-VTTAVRGTVGHIAPEYLST-----------GQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMIL 520 (626)
Q Consensus 453 a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~ 520 (626)
+......... ......||+.|+|||.+.+ ..++.++||||||+++|||++|+.||...... ..
T Consensus 173 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-----~~ 247 (313)
T 3cek_A 173 ANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ-----IS 247 (313)
T ss_dssp SCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSH-----HH
T ss_pred cccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHH-----HH
Confidence 9876543222 2234458999999999975 46889999999999999999999999743321 11
Q ss_pred HHHHHhhhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 521 DCVRTLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
...... +......++...+..+.+++.+||+.||++|||+.|+++.
T Consensus 248 -~~~~~~---------~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 248 -KLHAII---------DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp -HHHHHH---------CTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred -HHHHHH---------hcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 111111 1111112222234678999999999999999999999984
No 229
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=1.1e-38 Score=329.95 Aligned_cols=251 Identities=24% Similarity=0.339 Sum_probs=196.2
Q ss_pred hCCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCCc--------ccHHHHHHHHHHHHhccCCcccceeeeeecCC
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNF--------TGEVQFQTEVEMIGLALHRNLLRLYGFCMTPE 372 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~ 372 (626)
.++|.+.+.||+|+||.||+|... +++.||||++..... .....+.+|+++++.++||||+++++++....
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 456889999999999999999864 578999999875432 11235889999999999999999999987654
Q ss_pred ceEEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCc---EEEee
Q 006907 373 ERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFE---AVVGD 449 (626)
Q Consensus 373 ~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~---~ki~D 449 (626)
.++||||+++++|.+++.. ...+++..+..++.|++.||.|||++ +|+||||||+||+++.++. +||+|
T Consensus 89 -~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~D 160 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVVG----NKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITD 160 (322)
T ss_dssp -EEEEEECCTTEETHHHHST----TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECC
T ss_pred -eEEEEecCCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEcc
Confidence 8999999999999999864 23589999999999999999999999 9999999999999987654 99999
Q ss_pred ccCccccCCCCCceeeeecccCCccCccccc---cCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHh
Q 006907 450 FGLAKLLDRRDSHVTTAVRGTVGHIAPEYLS---TGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTL 526 (626)
Q Consensus 450 fG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~ 526 (626)
||++...... .......||+.|+|||++. +..++.++||||||+++|||++|+.||........ +......
T Consensus 161 fg~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~---~~~~~~~- 234 (322)
T 2ycf_A 161 FGHSKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS---LKDQITS- 234 (322)
T ss_dssp CTTCEECCCC--HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSC---HHHHHHH-
T ss_pred Cccceecccc--cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHH---HHHHHHh-
Confidence 9999876432 1223345899999999974 46789999999999999999999999975443221 1111111
Q ss_pred hhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006907 527 HEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLK 575 (626)
Q Consensus 527 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 575 (626)
..... .+... ...+..+.+++.+||+.||++|||+.|+++
T Consensus 235 ---~~~~~--~~~~~----~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 235 ---GKYNF--IPEVW----AEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp ---TCCCC--CHHHH----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ---Ccccc--Cchhh----hhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 00000 00000 112467899999999999999999999986
No 230
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=7.9e-38 Score=330.23 Aligned_cols=259 Identities=21% Similarity=0.294 Sum_probs=197.3
Q ss_pred CCCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCCccc--HHHHHHHHHHHHhccCCcccceeeeeecCCce-----
Q 006907 303 GNFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPNFTG--EVQFQTEVEMIGLALHRNLLRLYGFCMTPEER----- 374 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~----- 374 (626)
++|.+.+.||+|+||.||+|.. .+++.||+|++....... ...+.+|+.+++.++||||+++++++...+..
T Consensus 42 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 121 (371)
T 4exu_A 42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 121 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCC
T ss_pred ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccccee
Confidence 4688889999999999999985 458899999997654332 35688999999999999999999999877654
Q ss_pred -EEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCc
Q 006907 375 -LLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLA 453 (626)
Q Consensus 375 -~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a 453 (626)
++||||+. ++|.+++.. .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 122 ~~lv~e~~~-~~l~~~~~~------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~a 191 (371)
T 4exu_A 122 FYLVMPFMQ-TDLQKIMGM------EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLA 191 (371)
T ss_dssp CEEEEECCC-EEHHHHTTS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTCC
T ss_pred EEEEEcccc-ccHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCcc
Confidence 99999997 588887742 389999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCceeeeecccCCccCcccccc-CCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhcccc
Q 006907 454 KLLDRRDSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRL 532 (626)
Q Consensus 454 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~ 532 (626)
...... .....||+.|+|||++.+ ..++.++||||||+++|||++|+.||...+.......+.........+ ..
T Consensus 192 ~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~-~~ 266 (371)
T 4exu_A 192 RHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTE-FV 266 (371)
T ss_dssp ------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHH-HH
T ss_pred cccccC----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHH-HH
Confidence 865432 233458999999999987 678999999999999999999999998655333222222111100000 00
Q ss_pred ccc-----------cccccCCC---CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 533 DVL-----------IDRDLKGS---FDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 533 ~~~-----------~~~~l~~~---~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
..+ ........ ..+..+..+.+|+.+||+.||++|||++|+++.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 267 QKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp TTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 000 00000000 011235789999999999999999999999984
No 231
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=3.4e-38 Score=337.08 Aligned_cols=266 Identities=20% Similarity=0.284 Sum_probs=183.6
Q ss_pred CCc-CceeccCCCceEEEEEeC---CccEEEEEEecCCCcccHHHHHHHHHHHHhccCCcccceeeeee--cCCceEEEE
Q 006907 305 FSP-KNILGQGGYGVVYKGCLP---NRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCM--TPEERLLVY 378 (626)
Q Consensus 305 f~~-~~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~--~~~~~~lv~ 378 (626)
|.+ .++||+|+||.||+|... ++..||+|++..... ...+.+|+++++.++||||+++++++. .....++||
T Consensus 22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~ 99 (405)
T 3rgf_A 22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLF 99 (405)
T ss_dssp EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC--CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEE
T ss_pred hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC--CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEE
Confidence 444 468999999999999865 467899999975432 346789999999999999999999995 467789999
Q ss_pred eecCCCChHHHHhhcc-----CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe----CCCCcEEEee
Q 006907 379 PYMPNGSVADCLRDTR-----QAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILL----DESFEAVVGD 449 (626)
Q Consensus 379 E~~~~gsL~~~l~~~~-----~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl----~~~~~~ki~D 449 (626)
||++ |+|.+++.... .....+++..+..++.|++.||.|||+. +|+||||||+|||+ +.++.+||+|
T Consensus 100 e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~D 175 (405)
T 3rgf_A 100 DYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIAD 175 (405)
T ss_dssp ECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEEECC
T ss_pred eCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEEEEE
Confidence 9996 48888876432 1223589999999999999999999999 99999999999999 7789999999
Q ss_pred ccCccccCCCCC--ceeeeecccCCccCccccccC-CCCccchhHHHHHHHHHHHhCCCcCCCCCccc---------ccc
Q 006907 450 FGLAKLLDRRDS--HVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGVLLLELITGQKALDVGNGQV---------QKG 517 (626)
Q Consensus 450 fG~a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~t~~~DvwSlGvil~elltg~~p~~~~~~~~---------~~~ 517 (626)
||++........ .......||+.|+|||++.+. .++.++|||||||++|||++|+.||....... +..
T Consensus 176 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~ 255 (405)
T 3rgf_A 176 MGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLD 255 (405)
T ss_dssp TTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHH
T ss_pred CCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHH
Confidence 999987653221 222345689999999999874 58999999999999999999999997544321 111
Q ss_pred cHHHHHHHhhhccccccc-----------cccccCCCCC---------HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 518 MILDCVRTLHEERRLDVL-----------IDRDLKGSFD---------PTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 518 ~i~~~~~~~~~~~~~~~~-----------~~~~l~~~~~---------~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
.+...........+.... .......... ......+.+|+.+||+.||++|||++|+++.
T Consensus 256 ~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~h 334 (405)
T 3rgf_A 256 RIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD 334 (405)
T ss_dssp HHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 111111111110000000 0000000000 0114568899999999999999999999985
No 232
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=2.2e-38 Score=335.89 Aligned_cols=269 Identities=23% Similarity=0.260 Sum_probs=204.3
Q ss_pred HHHhCCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCCcccHHHHHHHHHHHHhcc-CC-----cccceeeeeecC
Q 006907 299 QIATGNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNFTGEVQFQTEVEMIGLAL-HR-----NLLRLYGFCMTP 371 (626)
Q Consensus 299 ~~~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~-----nIv~l~~~~~~~ 371 (626)
....++|.+.+.||+|+||+||+|... +++.||||+++... ....++..|+++++.++ |+ +|+++++++...
T Consensus 50 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~ 128 (382)
T 2vx3_A 50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFR 128 (382)
T ss_dssp CEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEET
T ss_pred CEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccC
Confidence 344678999999999999999999864 57889999997532 22346778888888875 44 499999999999
Q ss_pred CceEEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeC--CCCcEEEee
Q 006907 372 EERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLD--ESFEAVVGD 449 (626)
Q Consensus 372 ~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~--~~~~~ki~D 449 (626)
+..++||||++ |+|.+++.... ...+++..+..++.|++.||.|||++ +.+|+||||||+|||++ .++.+||+|
T Consensus 129 ~~~~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~D 204 (382)
T 2vx3_A 129 NHLCLVFEMLS-YNLYDLLRNTN--FRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVD 204 (382)
T ss_dssp TEEEEEEECCC-CBHHHHHHHTT--TSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECC
T ss_pred CceEEEEecCC-CCHHHHHhhcC--cCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEe
Confidence 99999999996 59999997642 23589999999999999999999952 22899999999999994 578899999
Q ss_pred ccCccccCCCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhc
Q 006907 450 FGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEE 529 (626)
Q Consensus 450 fG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~ 529 (626)
||++...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...+.......+..........
T Consensus 205 FG~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~ 280 (382)
T 2vx3_A 205 FGSSCQLGQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAH 280 (382)
T ss_dssp CTTCEETTCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHH
T ss_pred ccCceecccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHH
Confidence 9999876432 223458999999999999999999999999999999999999998655433332222221110000
Q ss_pred -----cc----cccccccc-------------------------------------cCCCCCHHHHHHHHHHHHHccCCC
Q 006907 530 -----RR----LDVLIDRD-------------------------------------LKGSFDPTELEKMVQLALQCTQSH 563 (626)
Q Consensus 530 -----~~----~~~~~~~~-------------------------------------l~~~~~~~~~~~l~~l~~~cl~~~ 563 (626)
.. ...+.+.. -...........+.+|+.+||+.|
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~d 360 (382)
T 2vx3_A 281 ILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYD 360 (382)
T ss_dssp HHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSC
T ss_pred HHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCC
Confidence 00 00000000 000122345568999999999999
Q ss_pred CCCCCCHHHHHHH
Q 006907 564 PNLRPKMSEVLKV 576 (626)
Q Consensus 564 P~~RPs~~evl~~ 576 (626)
|++|||++|+++.
T Consensus 361 P~~Rpta~e~L~h 373 (382)
T 2vx3_A 361 PKTRIQPYYALQH 373 (382)
T ss_dssp TTTSCCHHHHTTS
T ss_pred hhhCCCHHHHhcC
Confidence 9999999999874
No 233
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=9.1e-38 Score=329.66 Aligned_cols=265 Identities=19% Similarity=0.257 Sum_probs=200.5
Q ss_pred hCCCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCCcccHHHHHHHHHHHHhcc-----------CCcccceeeeee
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLAL-----------HRNLLRLYGFCM 369 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~nIv~l~~~~~ 369 (626)
.++|.+.+.||+|+||.||+|.. .+++.||||+++... .....+.+|++++++++ ||||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 35788999999999999999985 568899999997532 23456788999998876 899999999987
Q ss_pred cCC----ceEEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeC-----
Q 006907 370 TPE----ERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLD----- 440 (626)
Q Consensus 370 ~~~----~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~----- 440 (626)
..+ ..++||||+ +++|.+++.... ...+++..+..++.|++.||+|||+++ +|+||||||+|||++
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~~ 171 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKYE--HRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSP 171 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHTT--TSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETT
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHhh--ccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCCC
Confidence 654 679999999 889999997643 335899999999999999999999853 799999999999994
Q ss_pred -CCCcEEEeeccCccccCCCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccc--
Q 006907 441 -ESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKG-- 517 (626)
Q Consensus 441 -~~~~~ki~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~-- 517 (626)
..+.+||+|||++....... ....||+.|+|||++.+..++.++||||||+++|||++|+.||..........
T Consensus 172 ~~~~~~kl~Dfg~a~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 247 (373)
T 1q8y_A 172 ENLIQIKIADLGNACWYDEHY----TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDD 247 (373)
T ss_dssp TTEEEEEECCCTTCEETTBCC----CSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHH
T ss_pred cCcceEEEcccccccccCCCC----CCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChH
Confidence 44589999999998765432 23358999999999999999999999999999999999999998554322111
Q ss_pred -cHHHHHHHhh---h-----c----------ccccccccc---------ccCCCCCHHHHHHHHHHHHHccCCCCCCCCC
Q 006907 518 -MILDCVRTLH---E-----E----------RRLDVLIDR---------DLKGSFDPTELEKMVQLALQCTQSHPNLRPK 569 (626)
Q Consensus 518 -~i~~~~~~~~---~-----~----------~~~~~~~~~---------~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs 569 (626)
.+........ . . .....+... .....++...+.++.+|+.+||+.||++|||
T Consensus 248 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt 327 (373)
T 1q8y_A 248 DHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRAD 327 (373)
T ss_dssp HHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBC
T ss_pred HHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCC
Confidence 1111111000 0 0 000000000 0112356788899999999999999999999
Q ss_pred HHHHHHH
Q 006907 570 MSEVLKV 576 (626)
Q Consensus 570 ~~evl~~ 576 (626)
++|+++.
T Consensus 328 ~~ell~h 334 (373)
T 1q8y_A 328 AGGLVNH 334 (373)
T ss_dssp HHHHHTC
T ss_pred HHHHhhC
Confidence 9999884
No 234
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=2.6e-38 Score=331.65 Aligned_cols=259 Identities=21% Similarity=0.289 Sum_probs=197.7
Q ss_pred CCCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCCcc--cHHHHHHHHHHHHhccCCcccceeeeeecCCc------
Q 006907 303 GNFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPNFT--GEVQFQTEVEMIGLALHRNLLRLYGFCMTPEE------ 373 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~------ 373 (626)
++|.+.+.||+|+||.||+|.. .+++.||||++...... ....+.+|+.+++.++||||+++++++.....
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 5688899999999999999986 46889999999764332 23468899999999999999999999987654
Q ss_pred eEEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCc
Q 006907 374 RLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLA 453 (626)
Q Consensus 374 ~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a 453 (626)
.++||||++ ++|.+++.. .+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 104 ~~lv~e~~~-~~l~~~~~~------~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~ 173 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMGL------KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLA 173 (353)
T ss_dssp CEEEEECCS-EEGGGTTTS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCT
T ss_pred EEEEecccc-CCHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecccc
Confidence 499999997 588887642 389999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCceeeeecccCCccCcccccc-CCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhc---
Q 006907 454 KLLDRRDSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEE--- 529 (626)
Q Consensus 454 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~--- 529 (626)
...... .....+|+.|+|||++.+ ..++.++||||||+++|||++|+.||...+.......+.........+
T Consensus 174 ~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 249 (353)
T 3coi_A 174 RHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQ 249 (353)
T ss_dssp TC------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHT
T ss_pred cCCCCC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 865432 233458999999999977 678999999999999999999999998655332222221111000000
Q ss_pred -----------cccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 530 -----------RRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 530 -----------~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
........... .......+..+.+++.+||+.||++|||++|+++.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 250 KLNDKAAKSYIQSLPQTPRKDF-TQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp TCSCHHHHHHHHTSCBCSSCCT-TTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHhhHHHHHHHHhCcCCCCccH-HHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00000000000 11223456789999999999999999999999874
No 235
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=6.7e-38 Score=337.58 Aligned_cols=251 Identities=25% Similarity=0.318 Sum_probs=188.0
Q ss_pred CCcCceeccCCCceEEEEEeCCccEEEEEEecCCCcccHHHHHHHHHHHHhc-cCCcccceeeeeecCCceEEEEeecCC
Q 006907 305 FSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLA-LHRNLLRLYGFCMTPEERLLVYPYMPN 383 (626)
Q Consensus 305 f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv~E~~~~ 383 (626)
|...++||+|+||+||.+...+|+.||||++... ....+.+|+++++.+ +||||+++++++.+....++||||+.
T Consensus 17 ~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~- 92 (434)
T 2rio_A 17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN- 92 (434)
T ss_dssp EEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-
T ss_pred eeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-
Confidence 4456889999999998776677899999998642 234578899999876 89999999999999999999999995
Q ss_pred CChHHHHhhccCCCCC---CCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCC-------------CcEEE
Q 006907 384 GSVADCLRDTRQAKPP---LDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDES-------------FEAVV 447 (626)
Q Consensus 384 gsL~~~l~~~~~~~~~---l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~-------------~~~ki 447 (626)
|+|.+++......... .++..+..++.|++.||+|||++ +|+||||||+|||++.+ +.+||
T Consensus 93 gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL 169 (434)
T 2rio_A 93 LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILI 169 (434)
T ss_dssp EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEE
T ss_pred CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceEEEE
Confidence 6999999764322111 13334678999999999999999 99999999999999654 48999
Q ss_pred eeccCccccCCCCCc---eeeeecccCCccCcccccc-------CCCCccchhHHHHHHHHHHHh-CCCcCCCCCccccc
Q 006907 448 GDFGLAKLLDRRDSH---VTTAVRGTVGHIAPEYLST-------GQSSEKTDVFGFGVLLLELIT-GQKALDVGNGQVQK 516 (626)
Q Consensus 448 ~DfG~a~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-------~~~t~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~ 516 (626)
+|||++......... ......||+.|+|||++.+ ..++.++|||||||++|||++ |+.||.......
T Consensus 170 ~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~-- 247 (434)
T 2rio_A 170 SDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE-- 247 (434)
T ss_dssp CCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH--
T ss_pred cccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH--
Confidence 999999877543322 1223469999999999975 568999999999999999999 999996433211
Q ss_pred ccHHHHHHHhhhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006907 517 GMILDCVRTLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLK 575 (626)
Q Consensus 517 ~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 575 (626)
....... ... +..........+.++.+++.+||+.||++|||+.|+++
T Consensus 248 ---~~i~~~~---~~~-----~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 248 ---SNIIRGI---FSL-----DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp ---HHHHHTC---CCC-----CCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ---HHHhcCC---CCc-----ccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 1111110 000 11122234567789999999999999999999999987
No 236
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=4e-38 Score=322.06 Aligned_cols=252 Identities=25% Similarity=0.416 Sum_probs=192.7
Q ss_pred hCCCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCCcccHHHHHHHHHHHHhccCCcccceeeeeec----------
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMT---------- 370 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~---------- 370 (626)
.++|++.+.||+|+||.||+|.. .+++.||+|+++.. ......+.+|+.+++.++||||+++++++.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 45688899999999999999986 46889999998642 2234568899999999999999999998865
Q ss_pred ---CCceEEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEE
Q 006907 371 ---PEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVV 447 (626)
Q Consensus 371 ---~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki 447 (626)
....++||||+++|+|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~kl 157 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHSE---NLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKI 157 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHHS---CGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEE
T ss_pred cccCCceEEEEecCCCCCHHHhhhcc---ccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEEE
Confidence 34678999999999999999753 23578899999999999999999999 9999999999999999999999
Q ss_pred eeccCccccCCCC-------------CceeeeecccCCccCccccccC-CCCccchhHHHHHHHHHHHhCCCcCCCCCcc
Q 006907 448 GDFGLAKLLDRRD-------------SHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGVLLLELITGQKALDVGNGQ 513 (626)
Q Consensus 448 ~DfG~a~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~t~~~DvwSlGvil~elltg~~p~~~~~~~ 513 (626)
+|||++....... ........||+.|+|||.+.+. .++.++||||||+++|||++ ||....
T Consensus 158 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~-- 232 (303)
T 1zy4_A 158 GDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM-- 232 (303)
T ss_dssp CCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH--
T ss_pred eeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch--
Confidence 9999998654321 1122334589999999999764 68999999999999999998 543211
Q ss_pred cccccHHHHHHHhhhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 514 VQKGMILDCVRTLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 514 ~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
.. .......... .......++...+..+.+++.+||+.||++|||+.|+++.
T Consensus 233 -~~---~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 233 -ER---VNILKKLRSV-------SIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp -HH---HHHHHHHHST-------TCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred -hH---HHHHHhcccc-------ccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 00 1111111110 0111122334455778999999999999999999999984
No 237
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=2.7e-37 Score=314.10 Aligned_cols=252 Identities=24% Similarity=0.314 Sum_probs=202.2
Q ss_pred HhCCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCC--cccHHHHHHHHHHHHhccCCcccceeeeeecCCceEEE
Q 006907 301 ATGNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPN--FTGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLV 377 (626)
Q Consensus 301 ~~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv 377 (626)
..++|.+.+.||+|+||.||+|... +++.||+|++.... ......+.+|++++++++||||+++++++.+....++|
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 99 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence 3457999999999999999999865 68899999986433 23456789999999999999999999999999999999
Q ss_pred EeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCC---CcEEEeeccCcc
Q 006907 378 YPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDES---FEAVVGDFGLAK 454 (626)
Q Consensus 378 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~---~~~ki~DfG~a~ 454 (626)
+||+++++|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||+++.+ +.+||+|||++.
T Consensus 100 ~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~ 172 (287)
T 2wei_A 100 GELYTGGELFDEIIKRK----RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLST 172 (287)
T ss_dssp ECCCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGGG
T ss_pred EEccCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCcce
Confidence 99999999999987542 489999999999999999999999 99999999999999754 479999999998
Q ss_pred ccCCCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhcccccc
Q 006907 455 LLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDV 534 (626)
Q Consensus 455 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 534 (626)
....... .....+|+.|+|||.+.+ .++.++||||||+++|+|++|+.||....... + ............
T Consensus 173 ~~~~~~~--~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~----~---~~~~~~~~~~~~ 242 (287)
T 2wei_A 173 CFQQNTK--MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD----I---LKRVETGKYAFD 242 (287)
T ss_dssp TBCCCSS--CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----H---HHHHHHCCCCCC
T ss_pred eecCCCc--cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHH----H---HHHHHcCCCCCC
Confidence 6654322 223348899999999865 48999999999999999999999997543211 1 111111110000
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 535 LIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 535 ~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
... ....+..+.+++.+||+.||++|||+.|+++.
T Consensus 243 ---~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 243 ---LPQ----WRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp ---SGG----GTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred ---chh----hhhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 000 01234678999999999999999999999984
No 238
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.6e-38 Score=325.56 Aligned_cols=245 Identities=25% Similarity=0.390 Sum_probs=192.8
Q ss_pred HHHHhCCCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCCcc------cHHHHHHHHHHHHhc----cCCcccceee
Q 006907 298 LQIATGNFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPNFT------GEVQFQTEVEMIGLA----LHRNLLRLYG 366 (626)
Q Consensus 298 ~~~~~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l----~h~nIv~l~~ 366 (626)
.+...++|.+.+.||+|+||.||+|.. .+++.||+|+++..... ....+..|+.++.++ +||||+++++
T Consensus 26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~ 105 (312)
T 2iwi_A 26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD 105 (312)
T ss_dssp -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence 345567899999999999999999985 46889999999754332 223466799999988 8999999999
Q ss_pred eeecCCceEEEEee-cCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeC-CCCc
Q 006907 367 FCMTPEERLLVYPY-MPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLD-ESFE 444 (626)
Q Consensus 367 ~~~~~~~~~lv~E~-~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~-~~~~ 444 (626)
++.+.+..++|+|| +++++|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||+++ +++.
T Consensus 106 ~~~~~~~~~~v~e~~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~ 178 (312)
T 2iwi_A 106 WFETQEGFMLVLERPLPAQDLFDYITEKG----PLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGC 178 (312)
T ss_dssp EC-----CEEEEECCSSEEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTE
T ss_pred EEecCCeEEEEEEecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCe
Confidence 99999999999999 78999999997632 489999999999999999999999 999999999999999 8899
Q ss_pred EEEeeccCccccCCCCCceeeeecccCCccCccccccCCC-CccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHH
Q 006907 445 AVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCV 523 (626)
Q Consensus 445 ~ki~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~ 523 (626)
+||+|||++....... .....||..|+|||++.+..+ +.++||||||+++|||++|+.||.... .+ .
T Consensus 179 ~kl~dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~---~ 246 (312)
T 2iwi_A 179 AKLIDFGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ------EI---L 246 (312)
T ss_dssp EEECCCSSCEECCSSC---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------HH---H
T ss_pred EEEEEcchhhhcccCc---ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH------HH---h
Confidence 9999999998765432 233458999999999987766 458999999999999999999996321 00 0
Q ss_pred HHhhhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 524 RTLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 524 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
. . ...++...+..+.+++.+||+.||++|||++|+++.
T Consensus 247 ~-----~----------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 247 E-----A----------ELHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp H-----T----------CCCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred h-----h----------ccCCcccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 0 001222345678999999999999999999999974
No 239
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=1.1e-37 Score=326.30 Aligned_cols=264 Identities=18% Similarity=0.244 Sum_probs=201.9
Q ss_pred hCCCCcCceeccCCCceEEEEEeC-C-ccEEEEEEecCCCcccHHHHHHHHHHHHhccCCc------ccceeeeeecCCc
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCLP-N-RMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRN------LLRLYGFCMTPEE 373 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~~-~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------Iv~l~~~~~~~~~ 373 (626)
.++|.+.+.||+|+||.||+|... + +..||+|+++... .....+..|+++++.++|++ ++.+++++.....
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 457889999999999999999864 3 4789999997532 33456788999999998766 8999999999999
Q ss_pred eEEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe--------------
Q 006907 374 RLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILL-------------- 439 (626)
Q Consensus 374 ~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl-------------- 439 (626)
.++||||+ ++++.+++.... ...+++..+..++.|++.||.|||++ +|+||||||+|||+
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~~--~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~ 170 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKENN--FQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKS 170 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC-C
T ss_pred EEEEEecc-CCChHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeccccccccccccc
Confidence 99999999 667877776532 34589999999999999999999999 99999999999999
Q ss_pred -----CCCCcEEEeeccCccccCCCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCccc
Q 006907 440 -----DESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQV 514 (626)
Q Consensus 440 -----~~~~~~ki~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~ 514 (626)
+.++.+||+|||++....... ....||+.|+|||++.+..++.++||||||+++|||++|+.||.......
T Consensus 171 ~~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~ 246 (355)
T 2eu9_A 171 CEEKSVKNTSIRVADFGSATFDHEHH----TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE 246 (355)
T ss_dssp CCEEEESCCCEEECCCTTCEETTSCC----CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred ccccccCCCcEEEeecCccccccccc----cCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 567899999999998654322 23458999999999999999999999999999999999999998654332
Q ss_pred ccccHHHHHHHhhh-----cccccccccc---------------------ccCCCCCHHHHHHHHHHHHHccCCCCCCCC
Q 006907 515 QKGMILDCVRTLHE-----ERRLDVLIDR---------------------DLKGSFDPTELEKMVQLALQCTQSHPNLRP 568 (626)
Q Consensus 515 ~~~~i~~~~~~~~~-----~~~~~~~~~~---------------------~l~~~~~~~~~~~l~~l~~~cl~~~P~~RP 568 (626)
....+......... .......... .............+.+++.+||+.||++||
T Consensus 247 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rp 326 (355)
T 2eu9_A 247 HLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRI 326 (355)
T ss_dssp HHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSC
T ss_pred HHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCc
Confidence 22111111100000 0000000000 000112234567899999999999999999
Q ss_pred CHHHHHHH
Q 006907 569 KMSEVLKV 576 (626)
Q Consensus 569 s~~evl~~ 576 (626)
|+.|+++.
T Consensus 327 t~~e~l~h 334 (355)
T 2eu9_A 327 TLAEALLH 334 (355)
T ss_dssp CHHHHTTS
T ss_pred CHHHHhcC
Confidence 99999874
No 240
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=4.9e-38 Score=325.78 Aligned_cols=258 Identities=24% Similarity=0.301 Sum_probs=180.0
Q ss_pred hCCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCCcc-cHHHHHHHHH-HHHhccCCcccceeeeeecCCceEEEE
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNFT-GEVQFQTEVE-MIGLALHRNLLRLYGFCMTPEERLLVY 378 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~-~l~~l~h~nIv~l~~~~~~~~~~~lv~ 378 (626)
.++|.+.+.||+|+||.||+|... +++.||||+++..... ...++..|+. +++.++||||+++++++.+++..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 357888999999999999999864 6889999999765432 2334555665 677789999999999999999999999
Q ss_pred eecCCCChHHHHhhcc-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccC
Q 006907 379 PYMPNGSVADCLRDTR-QAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLD 457 (626)
Q Consensus 379 E~~~~gsL~~~l~~~~-~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~ 457 (626)
||+++ +|.+++.... .....+++..+..++.|++.||.|||+.. +|+||||||+||+++.++.+||+|||++....
T Consensus 101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 177 (327)
T 3aln_A 101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLV 177 (327)
T ss_dssp CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCSSSCC--
T ss_pred eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCCCceecc
Confidence 99975 8888876421 22456899999999999999999999852 79999999999999999999999999998664
Q ss_pred CCCCceeeeecccCCccCcccc----ccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccccc
Q 006907 458 RRDSHVTTAVRGTVGHIAPEYL----STGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLD 533 (626)
Q Consensus 458 ~~~~~~~~~~~gt~~y~aPE~~----~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~ 533 (626)
... ......||+.|+|||++ .+..++.++||||||+++|||++|+.||........ .......
T Consensus 178 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~------~~~~~~~----- 244 (327)
T 3aln_A 178 DSI--AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD------QLTQVVK----- 244 (327)
T ss_dssp ------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------------CCCCC-----
T ss_pred ccc--ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH------HHHHHhc-----
Confidence 332 12233589999999999 456789999999999999999999999975331100 0000000
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 534 VLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 534 ~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
...+.+........+..+.+++.+||+.||++|||+.|+++.
T Consensus 245 -~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 245 -GDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp -SCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred -CCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 000111111112345789999999999999999999999873
No 241
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=8.2e-38 Score=325.54 Aligned_cols=253 Identities=19% Similarity=0.221 Sum_probs=173.2
Q ss_pred hCCCCcC-ceeccCCCceEEEEEeC-CccEEEEEEecCCCcccHHHHHHHHHHHHhccCCcccceeeeeec----CCceE
Q 006907 302 TGNFSPK-NILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNLLRLYGFCMT----PEERL 375 (626)
Q Consensus 302 ~~~f~~~-~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~----~~~~~ 375 (626)
.++|.+. ++||+|+||.||+|... +++.||+|++... .....+....++.+.||||+++++++.. ....+
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 102 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS----PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLL 102 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc----HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEE
Confidence 4567774 46999999999999865 6889999998653 2222233334567789999999999876 34579
Q ss_pred EEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC---CCcEEEeeccC
Q 006907 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDE---SFEAVVGDFGL 452 (626)
Q Consensus 376 lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~---~~~~ki~DfG~ 452 (626)
+||||+++|+|.+++.... ...+++..+..++.|++.||.|||+. +|+||||||+||+++. ++.+||+|||+
T Consensus 103 lv~e~~~gg~L~~~l~~~~--~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~ 177 (336)
T 3fhr_A 103 IIMECMEGGELFSRIQERG--DQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGF 177 (336)
T ss_dssp EEEECCTTEEHHHHHHTC---CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred EEEeccCCCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEecccc
Confidence 9999999999999997532 34699999999999999999999999 9999999999999986 45599999999
Q ss_pred ccccCCCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhcccc
Q 006907 453 AKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRL 532 (626)
Q Consensus 453 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~ 532 (626)
+...... ......||+.|+|||++.+..++.++||||||+++|+|++|+.||.................. .
T Consensus 178 ~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~----~-- 248 (336)
T 3fhr_A 178 AKETTQN---ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRL----G-- 248 (336)
T ss_dssp CEEC-------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-------------------------
T ss_pred ceecccc---ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhc----c--
Confidence 9865432 223345899999999998888999999999999999999999999754432211111100000 0
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 533 DVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 533 ~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
............+..+.+++.+||+.||++|||+.|+++.
T Consensus 249 ----~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 249 ----QYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp ------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred ----ccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0000001112345778999999999999999999999984
No 242
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=4.5e-39 Score=332.72 Aligned_cols=246 Identities=22% Similarity=0.354 Sum_probs=199.9
Q ss_pred HHHHHhCCCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCCcc------cHHHHHHHHHHHHhcc--CCcccceeee
Q 006907 297 ELQIATGNFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPNFT------GEVQFQTEVEMIGLAL--HRNLLRLYGF 367 (626)
Q Consensus 297 ~~~~~~~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~--h~nIv~l~~~ 367 (626)
+.+...++|.+.+.||+|+||.||+|.. .+++.||||+++..... ....+..|+.++++++ ||||++++++
T Consensus 37 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~ 116 (320)
T 3a99_A 37 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW 116 (320)
T ss_dssp ---CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEE
T ss_pred ccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEE
Confidence 3344567899999999999999999985 56889999999754321 1235678999999996 5999999999
Q ss_pred eecCCceEEEEeecCC-CChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeC-CCCcE
Q 006907 368 CMTPEERLLVYPYMPN-GSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLD-ESFEA 445 (626)
Q Consensus 368 ~~~~~~~~lv~E~~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~-~~~~~ 445 (626)
+.+++..++|+|++.+ ++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++ +++.+
T Consensus 117 ~~~~~~~~lv~e~~~~~~~L~~~l~~~----~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~ 189 (320)
T 3a99_A 117 FERPDSFVLILERPEPVQDLFDFITER----GALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGEL 189 (320)
T ss_dssp EECSSEEEEEEECCSSEEEHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEE
T ss_pred EecCCcEEEEEEcCCCCccHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCE
Confidence 9999999999999976 8999999763 3589999999999999999999999 999999999999999 78999
Q ss_pred EEeeccCccccCCCCCceeeeecccCCccCccccccCCC-CccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHH
Q 006907 446 VVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVR 524 (626)
Q Consensus 446 ki~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~ 524 (626)
||+|||++....... .....||+.|+|||++.+..+ +.++||||||+++|||++|+.||..... ...
T Consensus 190 kL~Dfg~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~---------~~~ 257 (320)
T 3a99_A 190 KLIDFGSGALLKDTV---YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE---------IIR 257 (320)
T ss_dssp EECCCTTCEECCSSC---BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH---------HHH
T ss_pred EEeeCcccccccccc---ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh---------hhc
Confidence 999999998765322 233458999999999987765 7889999999999999999999963210 000
Q ss_pred HhhhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 525 TLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 525 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
. . ..++...+.++.+++.+||+.||++|||++|+++.
T Consensus 258 ----~-~----------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 258 ----G-Q----------VFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp ----C-C----------CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ----c-c----------ccccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 0 00112234678999999999999999999999883
No 243
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=7.9e-37 Score=315.08 Aligned_cols=250 Identities=21% Similarity=0.311 Sum_probs=179.0
Q ss_pred CCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCCccc-HH-HHHHHHHHHHhccCCcccceeeeeecCCceEEEEe
Q 006907 303 GNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNFTG-EV-QFQTEVEMIGLALHRNLLRLYGFCMTPEERLLVYP 379 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~-~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E 379 (626)
++|.+.+.||+|+||.||+|... +++.||||++....... .. .+.++..+++.++||||+++++++.+++..++|||
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e 104 (318)
T 2dyl_A 25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAME 104 (318)
T ss_dssp GGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEe
Confidence 46778899999999999999874 68899999997654322 22 34445556788899999999999999999999999
Q ss_pred ecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccCC
Q 006907 380 YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHE-QCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDR 458 (626)
Q Consensus 380 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~-~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~ 458 (626)
|+ ++.+..+.... ...+++..+..++.|++.||.|||+ . +|+||||||+||+++.++.+||+|||++.....
T Consensus 105 ~~-~~~~~~l~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 177 (318)
T 2dyl_A 105 LM-GTCAEKLKKRM---QGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRLVD 177 (318)
T ss_dssp CC-SEEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred cc-CCcHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhccC
Confidence 99 55565555432 2358999999999999999999998 6 899999999999999999999999999976543
Q ss_pred CCCceeeeecccCCccCccccc-----cCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccccc
Q 006907 459 RDSHVTTAVRGTVGHIAPEYLS-----TGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLD 533 (626)
Q Consensus 459 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~ 533 (626)
.. ......||+.|+|||.+. ...++.++||||||+++|||++|+.||...... ..............
T Consensus 178 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~~~~~~~~~~~~ 249 (318)
T 2dyl_A 178 DK--AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTD------FEVLTKVLQEEPPL 249 (318)
T ss_dssp -----------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSH------HHHHHHHHHSCCCC
T ss_pred Cc--cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCcc------HHHHHHHhccCCCC
Confidence 22 223345899999999994 456889999999999999999999999753221 11111111111100
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006907 534 VLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLK 575 (626)
Q Consensus 534 ~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 575 (626)
. ......+..+.+++.+||+.||.+|||++|+++
T Consensus 250 -~-------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 250 -L-------PGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp -C-------CSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred -C-------CccCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 0 001123467899999999999999999999987
No 244
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.3e-37 Score=331.47 Aligned_cols=249 Identities=26% Similarity=0.345 Sum_probs=186.8
Q ss_pred hCCCCcCceeccCCCceEEEEEeCCccEEEEEEecCCCcccHHHHHHHHHHHHhc-cCCcccceeeeeecCCceEEEEee
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLA-LHRNLLRLYGFCMTPEERLLVYPY 380 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv~E~ 380 (626)
..+|...++||+|+||+||.....+++.||||++...... .+.+|+++++.+ +|||||++++++.+....++||||
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~---~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~ 99 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS---FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIEL 99 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEE---ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH---HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEEC
Confidence 3457788999999999976555667889999999754332 356899999998 799999999999999999999999
Q ss_pred cCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC-----CCcEEEeeccCccc
Q 006907 381 MPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDE-----SFEAVVGDFGLAKL 455 (626)
Q Consensus 381 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~-----~~~~ki~DfG~a~~ 455 (626)
++ |+|.+++..... ...+..+..++.|++.||.|||+. +|+||||||+|||++. ...+||+|||++..
T Consensus 100 ~~-g~L~~~l~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~ 172 (432)
T 3p23_A 100 CA-ATLQEYVEQKDF---AHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKK 172 (432)
T ss_dssp CS-EEHHHHHHSSSC---CCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEEC
T ss_pred CC-CCHHHHHHhcCC---CccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccceee
Confidence 96 599999975432 344455678999999999999999 9999999999999953 34688999999987
Q ss_pred cCCCCC--ceeeeecccCCccCccccc---cCCCCccchhHHHHHHHHHHHh-CCCcCCCCCcccccccHHHHHHHhhhc
Q 006907 456 LDRRDS--HVTTAVRGTVGHIAPEYLS---TGQSSEKTDVFGFGVLLLELIT-GQKALDVGNGQVQKGMILDCVRTLHEE 529 (626)
Q Consensus 456 ~~~~~~--~~~~~~~gt~~y~aPE~~~---~~~~t~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~~i~~~~~~~~~~ 529 (626)
...... .......||+.|+|||++. ...++.++|||||||++|||++ |+.||....... .......
T Consensus 173 ~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~--------~~~~~~~ 244 (432)
T 3p23_A 173 LAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQ--------ANILLGA 244 (432)
T ss_dssp C------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHH--------HHHHTTC
T ss_pred ccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHH--------HHHHhcc
Confidence 654322 1233456999999999997 4567889999999999999999 898885332110 0111110
Q ss_pred cccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006907 530 RRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLK 575 (626)
Q Consensus 530 ~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 575 (626)
.... . ..........+.+++.+||+.||++|||+.|+++
T Consensus 245 ~~~~-----~--~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 245 CSLD-----C--LHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp CCCT-----T--SCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCcc-----c--cCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 0000 0 0112344567889999999999999999999996
No 245
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=2.5e-37 Score=343.41 Aligned_cols=267 Identities=23% Similarity=0.292 Sum_probs=202.6
Q ss_pred CCCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCC-cccHHHHHHHHHHHHhccCCcccceeeeeec------CCce
Q 006907 303 GNFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPN-FTGEVQFQTEVEMIGLALHRNLLRLYGFCMT------PEER 374 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~------~~~~ 374 (626)
++|.+.++||+|+||.||+|.. .+++.||||+++... ......+.+|+++++.++||||+++++++.. .+..
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~ 93 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP 93 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence 6799999999999999999986 458889999987643 2334568999999999999999999998765 6678
Q ss_pred EEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCc---EEEeecc
Q 006907 375 LLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFE---AVVGDFG 451 (626)
Q Consensus 375 ~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~---~ki~DfG 451 (626)
++||||+++|+|.+++.... ....+++..+..++.|++.||.|||+. +|+||||||+||+++.++. +||+|||
T Consensus 94 ~LVmEy~~ggsL~~~L~~~~-~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 94 LLAMEYCEGGDLRKYLNQFE-NCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp CCEEECCSSCBHHHHHHSSS-CTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred EEEEEeCCCCCHHHHHHhcc-cCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEcccc
Confidence 99999999999999998643 234588999999999999999999999 9999999999999997665 9999999
Q ss_pred CccccCCCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccc
Q 006907 452 LAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERR 531 (626)
Q Consensus 452 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~ 531 (626)
++........ .....||+.|+|||.+.+..++.++||||||+++|||++|+.||....... .|.........
T Consensus 170 ~a~~~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~------~~~~~i~~~~~ 241 (676)
T 3qa8_A 170 YAKELDQGEL--CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPV------QWHGKVREKSN 241 (676)
T ss_dssp CCCBTTSCCC--CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHH------HSSTTCC----
T ss_pred cccccccccc--cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchh------hhhhhhhcccc
Confidence 9987654332 234568999999999999999999999999999999999999997543211 11100000000
Q ss_pred cccccc----------c--ccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHH-----HHHHHhhcc
Q 006907 532 LDVLID----------R--DLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSE-----VLKVLEVLV 581 (626)
Q Consensus 532 ~~~~~~----------~--~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~e-----vl~~L~~l~ 581 (626)
...... . ..........+..+.+++.+||+.||++|||+.| +.+.++.++
T Consensus 242 ~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL 308 (676)
T 3qa8_A 242 EHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSIL 308 (676)
T ss_dssp --CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHH
T ss_pred hhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHH
Confidence 000000 0 0112244567889999999999999999999988 444555443
No 246
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.6e-36 Score=345.13 Aligned_cols=243 Identities=20% Similarity=0.276 Sum_probs=195.8
Q ss_pred hCCCCcCceeccCCCceEEEEEeC--CccEEEEEEecCCCc-ccHHHHHHHHHHHHhccCCcccceeeeeecCCc-----
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCLP--NRMVVAVKRLKDPNF-TGEVQFQTEVEMIGLALHRNLLRLYGFCMTPEE----- 373 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~~--~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~----- 373 (626)
.++|.+.++||+|+||.||+|... +++.||||++..... .....+.+|+++++.++||||+++++++...+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 367899999999999999999864 578999999875432 234468899999999999999999999987665
Q ss_pred eEEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCc
Q 006907 374 RLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLA 453 (626)
Q Consensus 374 ~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a 453 (626)
.|+||||+++++|.+++.. .+++..+..++.|++.||.|||++ +|+||||||+|||++.+ .+||+|||++
T Consensus 159 ~~lv~E~~~g~~L~~~~~~------~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a 228 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQ------KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAV 228 (681)
T ss_dssp EEEEEECCCCEECC----C------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTC
T ss_pred eEEEEEeCCCCcHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccc
Confidence 6999999999999987743 589999999999999999999999 99999999999999986 9999999999
Q ss_pred cccCCCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccccc
Q 006907 454 KLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLD 533 (626)
Q Consensus 454 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~ 533 (626)
...... ....||++|+|||++.+.. +.++|||||||++|+|++|..||.........
T Consensus 229 ~~~~~~-----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~~----------------- 285 (681)
T 2pzi_A 229 SRINSF-----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDGLP----------------- 285 (681)
T ss_dssp EETTCC-----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSSCC-----------------
T ss_pred hhcccC-----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccccccc-----------------
Confidence 876543 3345999999999997654 89999999999999999999888642111000
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHHhhcccch
Q 006907 534 VLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRP-KMSEVLKVLEVLVEPV 584 (626)
Q Consensus 534 ~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RP-s~~evl~~L~~l~~~~ 584 (626)
...........+.+++.+||+.||++|| +++++.+.|..++...
T Consensus 286 -------~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~~ 330 (681)
T 2pzi_A 286 -------EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLREV 330 (681)
T ss_dssp -------TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHHHH
T ss_pred -------ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHHHh
Confidence 0000112346789999999999999999 5666777777665443
No 247
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=5.9e-36 Score=304.17 Aligned_cols=231 Identities=11% Similarity=0.054 Sum_probs=184.4
Q ss_pred hCCCCcCceeccCCCceEEEEEeC-CccEEEEEEecCCCccc---HHHHHHHHHHHHhccCCcccceeeeeecCCceEEE
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNFTG---EVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLV 377 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv 377 (626)
.++|.+.+.||+|+||.||+|... +++.||+|+++...... ...+.+|+..++.++||||+++++++.+.+..++|
T Consensus 30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 109 (286)
T 3uqc_A 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV 109 (286)
T ss_dssp TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence 357889999999999999999875 48899999998654332 25689999999999999999999999999999999
Q ss_pred EeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccC
Q 006907 378 YPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLD 457 (626)
Q Consensus 378 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~ 457 (626)
|||+++++|.++++.. .....+..++.|++.||+|||++ +|+||||||+|||+++++.+||+++|
T Consensus 110 ~e~~~g~~L~~~l~~~------~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~------ 174 (286)
T 3uqc_A 110 AEWIRGGSLQEVADTS------PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA------ 174 (286)
T ss_dssp EECCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC------
T ss_pred EEecCCCCHHHHHhcC------CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc------
Confidence 9999999999999531 35557889999999999999999 99999999999999999999998543
Q ss_pred CCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhccccccccc
Q 006907 458 RRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLID 537 (626)
Q Consensus 458 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 537 (626)
|++ .++.++||||||+++|||++|+.||............ .....
T Consensus 175 ---------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~-------------~~~~~ 219 (286)
T 3uqc_A 175 ---------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPA-------------ERDTA 219 (286)
T ss_dssp ---------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEEC-------------CBCTT
T ss_pred ---------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHH-------------HHHhc
Confidence 333 3688999999999999999999999865432211000 00000
Q ss_pred cccC--CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhhcccc
Q 006907 538 RDLK--GSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLKVLEVLVEP 583 (626)
Q Consensus 538 ~~l~--~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~l~~~ 583 (626)
.... .......+.++.+++.+||+.||++| |+.|+++.|+.+...
T Consensus 220 ~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~ 266 (286)
T 3uqc_A 220 GQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAV 266 (286)
T ss_dssp SCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC-
T ss_pred cCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhcc
Confidence 0000 00112234678999999999999999 999999999987654
No 248
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=2.2e-36 Score=323.58 Aligned_cols=242 Identities=14% Similarity=0.080 Sum_probs=180.8
Q ss_pred CCCCcCceeccCCCceEEEEEe-CCccEEEEEEecCCCcc---cHHHHHHHHHHHHhccC-Ccccceeee----------
Q 006907 303 GNFSPKNILGQGGYGVVYKGCL-PNRMVVAVKRLKDPNFT---GEVQFQTEVEMIGLALH-RNLLRLYGF---------- 367 (626)
Q Consensus 303 ~~f~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h-~nIv~l~~~---------- 367 (626)
.+|...++||+|+||.||+|.. .+++.||||+++..... ..+.+.+|+.+++.++| +|......+
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 3466778999999999999984 56889999999843322 24578999999999877 322211111
Q ss_pred -----------eec-----CCceEEEEeecCCCChHHHHhhc---cCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeE
Q 006907 368 -----------CMT-----PEERLLVYPYMPNGSVADCLRDT---RQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKII 428 (626)
Q Consensus 368 -----------~~~-----~~~~~lv~E~~~~gsL~~~l~~~---~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~iv 428 (626)
+.. ....+++|+++ +++|.++++.. ......+++..+..++.|++.||+|||++ +|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---Ccc
Confidence 111 12346677765 67999988532 22344588899999999999999999999 999
Q ss_pred ecCCCCCcEEeCCCCcEEEeeccCccccCCCCCceeeeecccCCccCcccc----------ccCCCCccchhHHHHHHHH
Q 006907 429 HRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYL----------STGQSSEKTDVFGFGVLLL 498 (626)
Q Consensus 429 H~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~t~~~DvwSlGvil~ 498 (626)
||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ .+..++.++|||||||++|
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ 308 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIY 308 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHH
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHH
Confidence 9999999999999999999999998764432 334457 999999999 5556889999999999999
Q ss_pred HHHhCCCcCCCCCcccccccHHHHHHHhhhccccccccccccCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 006907 499 ELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDRDLKGSFDPTELEKMVQLALQCTQSHPNLRPKMSEVLK 575 (626)
Q Consensus 499 elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 575 (626)
||++|+.||........... +.... . ..+..+.+++.+||+.||++|||+.|+++
T Consensus 309 elltg~~Pf~~~~~~~~~~~----------------~~~~~--~----~~~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 309 WIWCADLPNTDDAALGGSEW----------------IFRSC--K----NIPQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp HHHHSSCCCCTTGGGSCSGG----------------GGSSC--C----CCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHCCCCCCCcchhhhHHH----------------HHhhc--c----cCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 99999999975442221111 11100 1 12367999999999999999999877754
No 249
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=4.2e-35 Score=299.85 Aligned_cols=227 Identities=20% Similarity=0.271 Sum_probs=178.1
Q ss_pred CCCCcC-ceeccCCCceEEEEEe-CCccEEEEEEecCCCcccHHHHHHHHHHH-HhccCCcccceeeeeec----CCceE
Q 006907 303 GNFSPK-NILGQGGYGVVYKGCL-PNRMVVAVKRLKDPNFTGEVQFQTEVEMI-GLALHRNLLRLYGFCMT----PEERL 375 (626)
Q Consensus 303 ~~f~~~-~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~h~nIv~l~~~~~~----~~~~~ 375 (626)
++|.+. ++||+|+||.||++.. .+++.||+|+++. ...+.+|++++ +..+||||+++++++.. ....+
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 91 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 91 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence 345565 7899999999999986 5688999999864 24567888887 55689999999999876 66789
Q ss_pred EEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC---CCcEEEeeccC
Q 006907 376 LVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDE---SFEAVVGDFGL 452 (626)
Q Consensus 376 lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~---~~~~ki~DfG~ 452 (626)
+||||+++|+|.+++.... ...+++..+..++.|++.||.|||+. +|+||||||+||+++. ++.+||+|||+
T Consensus 92 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~ 166 (299)
T 3m2w_A 92 IVMECLDGGELFSRIQDRG--DQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGF 166 (299)
T ss_dssp EEECCCCSCBHHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTT
T ss_pred EEEeecCCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEecccc
Confidence 9999999999999998632 34699999999999999999999999 9999999999999997 78999999999
Q ss_pred ccccCCCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCCCCCcccccccHHHHHHHhhhcccc
Q 006907 453 AKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALDVGNGQVQKGMILDCVRTLHEERRL 532 (626)
Q Consensus 453 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~ 532 (626)
+.... +..++.++||||||+++|||++|+.||........... ..
T Consensus 167 a~~~~-----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~------------~~ 211 (299)
T 3m2w_A 167 AKETT-----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPG------------MK 211 (299)
T ss_dssp CEECT-----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CC------------SC
T ss_pred ccccc-----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHH------------HH
Confidence 86432 23467799999999999999999999975432211000 00
Q ss_pred ccccccccCCCCC----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 006907 533 DVLIDRDLKGSFD----PTELEKMVQLALQCTQSHPNLRPKMSEVLKV 576 (626)
Q Consensus 533 ~~~~~~~l~~~~~----~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 576 (626)
...... ....+ ...+.++.+++.+||+.||++|||+.|+++.
T Consensus 212 ~~~~~~--~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 212 TRIRMG--QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp CSSCTT--CCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHhhc--cccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 000000 01112 1235789999999999999999999999984
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=4.2e-36 Score=312.62 Aligned_cols=242 Identities=12% Similarity=0.097 Sum_probs=182.5
Q ss_pred hCCCCcCceeccCCCceEEEEEeCCccEEEEEEecCCCc--------ccHHHHHHHHHHHHhcc----------------
Q 006907 302 TGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNF--------TGEVQFQTEVEMIGLAL---------------- 357 (626)
Q Consensus 302 ~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~---------------- 357 (626)
.++|.+.+.||+|+||+||+|.. +++.||||+++.... .....+.+|+++++.++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 35678899999999999999987 678999999975431 22367889999998886
Q ss_pred ----------CCcccceeeeeec-------------CCceEEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHH
Q 006907 358 ----------HRNLLRLYGFCMT-------------PEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTAR 414 (626)
Q Consensus 358 ----------h~nIv~l~~~~~~-------------~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~ 414 (626)
||||+++++++.+ ....++||||+++|++.+.+.. ..+++..+..++.|++.
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-----~~~~~~~~~~i~~qi~~ 172 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-----KLSSLATAKSILHQLTA 172 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-----TCCCHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-----cCCCHHHHHHHHHHHHH
Confidence 4555555555544 6789999999999977666642 34899999999999999
Q ss_pred HHHHHH-hcCCCCeEecCCCCCcEEeCCCC--------------------cEEEeeccCccccCCCCCceeeeecccCCc
Q 006907 415 GLLYLH-EQCNPKIIHRDVKAANILLDESF--------------------EAVVGDFGLAKLLDRRDSHVTTAVRGTVGH 473 (626)
Q Consensus 415 ~l~yLH-~~~~~~ivH~Dlkp~NILl~~~~--------------------~~ki~DfG~a~~~~~~~~~~~~~~~gt~~y 473 (626)
||+||| +. +|+||||||+|||++.++ .+||+|||+++..... ...||+.|
T Consensus 173 aL~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~y 243 (336)
T 2vuw_A 173 SLAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDVS 243 (336)
T ss_dssp HHHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCCT
T ss_pred HHHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeecc
Confidence 999999 88 999999999999999887 8999999999876532 23599999
Q ss_pred cCccccccCCCCccchhHHHHHH-HHHHHhCCCcCCCCCcccccccHHHHHHHhhhccccccccccccCCCCCHHHHHHH
Q 006907 474 IAPEYLSTGQSSEKTDVFGFGVL-LLELITGQKALDVGNGQVQKGMILDCVRTLHEERRLDVLIDRDLKGSFDPTELEKM 552 (626)
Q Consensus 474 ~aPE~~~~~~~t~~~DvwSlGvi-l~elltg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l 552 (626)
+|||++.+.. +.++||||+|++ .+++++|..||... .|..........................++++
T Consensus 244 ~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 312 (336)
T 2vuw_A 244 MDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNV----------LWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKI 312 (336)
T ss_dssp TCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHH----------HHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHH
T ss_pred cChhhhcCCC-ccceehhhhhCCCCcccccccCCCcch----------hhhhHHHHhhhhhhccCcccchhhhhhcCHHH
Confidence 9999998766 899999998777 78888999988421 11111100000000000111111234678899
Q ss_pred HHHHHHccCCCCCCCCCHHHHH
Q 006907 553 VQLALQCTQSHPNLRPKMSEVL 574 (626)
Q Consensus 553 ~~l~~~cl~~~P~~RPs~~evl 574 (626)
.+|+.+||+.| |++|++
T Consensus 313 ~dli~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 313 QEFHRTMLNFS-----SATDLL 329 (336)
T ss_dssp HHHHHHGGGSS-----SHHHHH
T ss_pred HHHHHHHhccC-----CHHHHH
Confidence 99999999976 999988
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=1.6e-29 Score=280.07 Aligned_cols=185 Identities=16% Similarity=0.050 Sum_probs=128.9
Q ss_pred eccCCCceEEEEE-eCCccEEEEEEecCCCc----------ccHHHHHHHHHHHHhc-cCCcccceeeeeecCCceEEEE
Q 006907 311 LGQGGYGVVYKGC-LPNRMVVAVKRLKDPNF----------TGEVQFQTEVEMIGLA-LHRNLLRLYGFCMTPEERLLVY 378 (626)
Q Consensus 311 lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~----------~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv~ 378 (626)
.+.|+.|.+..++ ..-|+.+|+|++..... ...++|.+|+++|+++ .|+||+++++++.++...||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 4556666555543 33477799999975421 1124589999999999 6999999999999999999999
Q ss_pred eecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccCC
Q 006907 379 PYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDR 458 (626)
Q Consensus 379 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~ 458 (626)
||++|++|.++|... .+++.. +|+.||+.||+|+|++ +||||||||+|||+++++++||+|||+|+....
T Consensus 322 Eyv~G~~L~d~i~~~----~~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~ 391 (569)
T 4azs_A 322 EKLPGRLLSDMLAAG----EEIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQ 391 (569)
T ss_dssp ECCCSEEHHHHHHTT----CCCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC-
T ss_pred ecCCCCcHHHHHHhC----CCCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCC
Confidence 999999999999753 346653 5889999999999999 999999999999999999999999999987654
Q ss_pred CCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcC
Q 006907 459 RDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKAL 507 (626)
Q Consensus 459 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~ 507 (626)
... ......||++|||||++.+ .+..++|+||+|++++++.++..++
T Consensus 392 ~~~-~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 392 DCS-WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp --C-CSHHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred CCc-cccCceechhhccHHHhCC-CCCCcccccccccchhhhccccchh
Confidence 322 2334569999999999965 5677899999999998887765544
No 252
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.94 E-value=7.2e-27 Score=240.33 Aligned_cols=163 Identities=26% Similarity=0.456 Sum_probs=153.0
Q ss_pred CCchHHHHHHHHHHHHccCCCCCCCCCCCCCCCCcc--ceeeeeCCC---CcEEEEEeCCCCCcc--cCCccccCCcccc
Q 006907 40 KGVNYEVAALMALKIKMRDDLHVMDGWDINSVDPCT--WNMVACSAE---GFVVSLEMASMGLSG--TLSPSIGNLTHLR 112 (626)
Q Consensus 40 ~~~~~~~~al~~~k~~~~~~~~~l~sW~~~~~~~C~--w~gv~C~~~---~~v~~l~L~~~~l~~--~~~~~~~~l~~L~ 112 (626)
.|.+.|++||++||+++.+|. .+++|.. +.|||. |.||+|+.. ++|+.|+|++|+++| .+|..|+++++|+
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~-~l~~W~~-~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~ 79 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPT-TLSSWLP-TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLN 79 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCG-GGTTCCT-TSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCS
T ss_pred CCCHHHHHHHHHHHHhcCCcc-cccCCCC-CCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCC
Confidence 488899999999999998876 7899975 579998 999999854 799999999999999 9999999999999
Q ss_pred eeeecc-CCCCCCCCcccCCccccceEecccccccCCCCchhhccccccceeeccccccCCchhhhhcCCCCccccCCCC
Q 006907 113 TMLLHN-NQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRLNNNKLSGQIPTLVANLTSLSFLDLSFN 191 (626)
Q Consensus 113 ~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N 191 (626)
+|+|++ |.+.+.+|..|+++++|++|+|++|++++.+|..|..+++|++|+|++|++++.+|..+.++++|++|++++|
T Consensus 80 ~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 159 (313)
T 1ogq_A 80 FLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGN 159 (313)
T ss_dssp EEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSS
T ss_pred eeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCC
Confidence 999995 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccCC
Q 006907 192 NLSGPTPKVLANG 204 (626)
Q Consensus 192 ~l~~~~p~~~~~~ 204 (626)
+++|.+|..+.+.
T Consensus 160 ~l~~~~p~~l~~l 172 (313)
T 1ogq_A 160 RISGAIPDSYGSF 172 (313)
T ss_dssp CCEEECCGGGGCC
T ss_pred cccCcCCHHHhhh
Confidence 9999999887653
No 253
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.93 E-value=1.1e-26 Score=255.76 Aligned_cols=185 Identities=17% Similarity=0.269 Sum_probs=146.1
Q ss_pred CcCceeccCCCceEEEEEeCCccEEEEEEecCCCccc--------HHHHHHHHHHHHhccCCcccceeeeeecCCceEEE
Q 006907 306 SPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTG--------EVQFQTEVEMIGLALHRNLLRLYGFCMTPEERLLV 377 (626)
Q Consensus 306 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--------~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv 377 (626)
...++||+|+||.||+|.. .+..+++|+........ .+.+.+|++++++++||||+++..++...+..++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 4467899999999999954 45678888765433221 23478999999999999999777777788888999
Q ss_pred EeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccC
Q 006907 378 YPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLD 457 (626)
Q Consensus 378 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~ 457 (626)
|||+++++|.+++.. +..++.|+++||.|||++ +|+||||||+|||+++ ++||+|||+++...
T Consensus 418 mE~~~ggsL~~~l~~------------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~ 480 (540)
T 3en9_A 418 MSYINGKLAKDVIED------------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISN 480 (540)
T ss_dssp EECCCSEEHHHHSTT------------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECC
T ss_pred EECCCCCCHHHHHHH------------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECC
Confidence 999999999999864 468999999999999999 9999999999999999 99999999999775
Q ss_pred CCCCce------eeeecccCCccCcccccc--CCCCccchhHHHHHHHHHHHhCCCcCC
Q 006907 458 RRDSHV------TTAVRGTVGHIAPEYLST--GQSSEKTDVFGFGVLLLELITGQKALD 508 (626)
Q Consensus 458 ~~~~~~------~~~~~gt~~y~aPE~~~~--~~~t~~~DvwSlGvil~elltg~~p~~ 508 (626)
...... .....||+.|||||++.. ..|+..+|+||..+-..+-+.++.+|.
T Consensus 481 ~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 481 LDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp CHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred CccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 432211 124569999999999976 567888999999999999888777663
No 254
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.88 E-value=2.9e-23 Score=209.73 Aligned_cols=154 Identities=13% Similarity=0.039 Sum_probs=124.0
Q ss_pred hHHHHHHhCCCCcCceeccCCCceEEEEEeCCccEEEEEEecCCCc------------------ccHHHHHHHHHHHHhc
Q 006907 295 FRELQIATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNF------------------TGEVQFQTEVEMIGLA 356 (626)
Q Consensus 295 ~~~~~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~E~~~l~~l 356 (626)
...+......|.+.+.||+|+||.||+|...+++.||+|.++.... .....+.+|+++++.+
T Consensus 82 l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l 161 (282)
T 1zar_A 82 LHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL 161 (282)
T ss_dssp HHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhc
Confidence 3445555666778899999999999999987789999999964321 1234688999999999
Q ss_pred cCCcccceeeeeecCCceEEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCc
Q 006907 357 LHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAAN 436 (626)
Q Consensus 357 ~h~nIv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~N 436 (626)
+ | +++.+++.. +..++||||+++|+|.+ +.. .....++.|++.||.|||+. +|+||||||+|
T Consensus 162 ~--~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~----------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~N 223 (282)
T 1zar_A 162 Q--G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV----------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYN 223 (282)
T ss_dssp T--T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC----------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTS
T ss_pred c--C-CCcCeEEec-cceEEEEEecCCCcHHH-cch----------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHH
Confidence 8 5 677775543 56799999999999998 521 12457999999999999999 99999999999
Q ss_pred EEeCCCCcEEEeeccCccccCCCCCceeeeecccCCccCcccccc
Q 006907 437 ILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLST 481 (626)
Q Consensus 437 ILl~~~~~~ki~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 481 (626)
||++ ++.+||+|||++. .+..|+|||++.+
T Consensus 224 ILl~-~~~vkl~DFG~a~--------------~~~~~~a~e~l~r 253 (282)
T 1zar_A 224 VLVS-EEGIWIIDFPQSV--------------EVGEEGWREILER 253 (282)
T ss_dssp EEEE-TTEEEECCCTTCE--------------ETTSTTHHHHHHH
T ss_pred EEEE-CCcEEEEECCCCe--------------ECCCCCHHHHHHH
Confidence 9999 9999999999986 3446789998853
No 255
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.88 E-value=1.4e-23 Score=241.81 Aligned_cols=161 Identities=22% Similarity=0.297 Sum_probs=144.1
Q ss_pred CCCCchHHHHHHHHHHHHccCCCCCCCCCCCCC----CCC--ccc------------eeeeeCCCCcEEEEEeCCCCCcc
Q 006907 38 SPKGVNYEVAALMALKIKMRDDLHVMDGWDINS----VDP--CTW------------NMVACSAEGFVVSLEMASMGLSG 99 (626)
Q Consensus 38 ~~~~~~~~~~al~~~k~~~~~~~~~l~sW~~~~----~~~--C~w------------~gv~C~~~~~v~~l~L~~~~l~~ 99 (626)
...+...|++||++||+++.+| +|+.++ .+| |.| .||+|+..++|+.|+|++++|.|
T Consensus 263 ~~~~~~~d~~ALl~~k~~l~~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G 337 (876)
T 4ecn_A 263 ETAEYIKDYKALKAIWEALDGK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKG 337 (876)
T ss_dssp CCCHHHHHHHHHHHHHHHTTGG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEE
T ss_pred ccccchHHHHHHHHHHHHcCCC-----CCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCCCCC
Confidence 3345568999999999999876 797654 467 999 99999988999999999999999
Q ss_pred cCCccccCCcccceeee-ccCCCCCC------------------------------------------------------
Q 006907 100 TLSPSIGNLTHLRTMLL-HNNQLSGP------------------------------------------------------ 124 (626)
Q Consensus 100 ~~~~~~~~l~~L~~L~L-~~N~l~~~------------------------------------------------------ 124 (626)
.+|+.|++|++|++|+| ++|.++|.
T Consensus 338 ~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i 417 (876)
T 4ecn_A 338 RVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPI 417 (876)
T ss_dssp EECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCC
T ss_pred cCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcccccc
Confidence 99999999999999999 77765544
Q ss_pred ----------------------CCcccCCccccceEecccccccC-----------------CCCchhh--cccccccee
Q 006907 125 ----------------------IPVEFGMLSELQTLDLSNNQLVG-----------------EIPSSLG--FLTHLTYLR 163 (626)
Q Consensus 125 ----------------------~p~~~~~l~~L~~L~L~~N~l~g-----------------~~p~~~~--~l~~L~~L~ 163 (626)
+|..|++|++|+.|+|++|+|+| .+|..++ ++++|+.|+
T Consensus 418 ~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~ 497 (876)
T 4ecn_A 418 KKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVE 497 (876)
T ss_dssp CCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEE
T ss_pred ccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEE
Confidence 88999999999999999999998 3999987 999999999
Q ss_pred eccccccCCchhhhhcCCCCccccCCCCC-CCC-CCCccccC
Q 006907 164 LNNNKLSGQIPTLVANLTSLSFLDLSFNN-LSG-PTPKVLAN 203 (626)
Q Consensus 164 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~-l~~-~~p~~~~~ 203 (626)
|++|++.|.+|..|.++++|+.|+|++|+ ++| .+|..+++
T Consensus 498 Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~ 539 (876)
T 4ecn_A 498 LYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTR 539 (876)
T ss_dssp EESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHH
T ss_pred CcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHh
Confidence 99999999999999999999999999998 998 88876553
No 256
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.87 E-value=3e-23 Score=239.19 Aligned_cols=156 Identities=28% Similarity=0.362 Sum_probs=114.6
Q ss_pred CchHHHHHHHHHHHHccCCCCCCCCCCCCCCCCccceeeeeCCCCcEEEEEeCCCCCccc---CCc--------------
Q 006907 41 GVNYEVAALMALKIKMRDDLHVMDGWDINSVDPCTWNMVACSAEGFVVSLEMASMGLSGT---LSP-------------- 103 (626)
Q Consensus 41 ~~~~~~~al~~~k~~~~~~~~~l~sW~~~~~~~C~w~gv~C~~~~~v~~l~L~~~~l~~~---~~~-------------- 103 (626)
+.+.|++||++||+++.||. .+++|.. ++|||.|.||+|+ .++|+.|+|+++++.|. +|+
T Consensus 9 ~~~~~~~all~~k~~~~~~~-~l~~W~~-~~~~C~w~gv~C~-~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l~~~ 85 (768)
T 3rgz_A 9 SLYREIHQLISFKDVLPDKN-LLPDWSS-NKNPCTFDGVTCR-DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLS 85 (768)
T ss_dssp CHHHHHHHHHHHHTTCSCTT-SSTTCCT-TSCGGGSTTEEEE-TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEEECT
T ss_pred CCHHHHHHHHHHHhhCCCcc-cccCCCC-CCCCcCCcceEEC-CCcEEEEECCCCCcCCccCccChhHhccCcccccCCc
Confidence 35689999999999999888 8999984 5799999999999 78999999999999987 554
Q ss_pred ---------cccCCcccceeeeccCCCCCCCCc--ccCCccccceEecccccccCCCCchh-hccccccceeeccccccC
Q 006907 104 ---------SIGNLTHLRTMLLHNNQLSGPIPV--EFGMLSELQTLDLSNNQLVGEIPSSL-GFLTHLTYLRLNNNKLSG 171 (626)
Q Consensus 104 ---------~~~~l~~L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~g~~p~~~-~~l~~L~~L~l~~N~l~~ 171 (626)
.|+++++|++|+|++|.++|.+|. .++++++|++|+|++|.+++.+|..+ .++++|++|+|++|++++
T Consensus 86 ~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~ 165 (768)
T 3rgz_A 86 NSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISG 165 (768)
T ss_dssp TSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEE
T ss_pred CCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccCC
Confidence 555666666666666666666665 66666666666666666666666554 566666666666666666
Q ss_pred Cchhh---hhcCCCCccccCCCCCCCCCCCc
Q 006907 172 QIPTL---VANLTSLSFLDLSFNNLSGPTPK 199 (626)
Q Consensus 172 ~~p~~---~~~l~~L~~L~l~~N~l~~~~p~ 199 (626)
..|.. +.++++|+.|++++|.+++.+|.
T Consensus 166 ~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~ 196 (768)
T 3rgz_A 166 ANVVGWVLSDGCGELKHLAISGNKISGDVDV 196 (768)
T ss_dssp ETHHHHHHTTCCTTCCEEECCSSEEESCCBC
T ss_pred cCChhhhhhccCCCCCEEECCCCcccccCCc
Confidence 65555 56666666666666666665553
No 257
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.87 E-value=5.5e-23 Score=231.78 Aligned_cols=161 Identities=20% Similarity=0.314 Sum_probs=144.2
Q ss_pred CchHHHHHHHHHHHHccCCCC--------CCCCCCCCCCCCccc---eeeeeCCCCcEEEEEeCCCCCcccCCccccCCc
Q 006907 41 GVNYEVAALMALKIKMRDDLH--------VMDGWDINSVDPCTW---NMVACSAEGFVVSLEMASMGLSGTLSPSIGNLT 109 (626)
Q Consensus 41 ~~~~~~~al~~~k~~~~~~~~--------~l~sW~~~~~~~C~w---~gv~C~~~~~v~~l~L~~~~l~~~~~~~~~~l~ 109 (626)
....|++||.+|+.++.++.- ...+|+. +.|||.| .||+|+..++|+.|+|++++++|.+|+.|++|+
T Consensus 27 ~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~-~~~~c~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp~~l~~L~ 105 (636)
T 4eco_A 27 EYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNF-NKELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQLT 105 (636)
T ss_dssp HHHHHHHHHHHHHHHTTGGGCCCCC------CCCCC-SSCGGGTTCCTTEEECTTCCEEEEECTTSCCEEEECGGGGGCT
T ss_pred hHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCC-CCCcccccCCCCeEEcCCCCEEEEEecCcccCCcCChHHhcCc
Confidence 345799999999999876532 2347986 4799999 999998879999999999999999999999999
Q ss_pred ccceeeeccCC---------------------------------------------------------------------
Q 006907 110 HLRTMLLHNNQ--------------------------------------------------------------------- 120 (626)
Q Consensus 110 ~L~~L~L~~N~--------------------------------------------------------------------- 120 (626)
+|++|+|++|.
T Consensus 106 ~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~ 185 (636)
T 4eco_A 106 ELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKD 185 (636)
T ss_dssp TCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCT
T ss_pred cceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchhh
Confidence 99999999984
Q ss_pred ---------CCCCCCcccCCccccceEecccccccCC-----------------CCchhh--ccccccceeeccccccCC
Q 006907 121 ---------LSGPIPVEFGMLSELQTLDLSNNQLVGE-----------------IPSSLG--FLTHLTYLRLNNNKLSGQ 172 (626)
Q Consensus 121 ---------l~~~~p~~~~~l~~L~~L~L~~N~l~g~-----------------~p~~~~--~l~~L~~L~l~~N~l~~~ 172 (626)
++| +|..|+++++|++|+|++|+|+|. +|..++ ++++|++|+|++|++.|.
T Consensus 186 l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~ 264 (636)
T 4eco_A 186 TQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTK 264 (636)
T ss_dssp TTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSS
T ss_pred hhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCcc
Confidence 445 899999999999999999999986 999999 999999999999999999
Q ss_pred chhhhhcCCCCccccCCCCC-CCC-CCCccccC
Q 006907 173 IPTLVANLTSLSFLDLSFNN-LSG-PTPKVLAN 203 (626)
Q Consensus 173 ~p~~~~~l~~L~~L~l~~N~-l~~-~~p~~~~~ 203 (626)
+|..+.++++|+.|++++|+ ++| .+|..+++
T Consensus 265 ~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~ 297 (636)
T 4eco_A 265 LPTFLKALPEMQLINVACNRGISGEQLKDDWQA 297 (636)
T ss_dssp CCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHH
T ss_pred ChHHHhcCCCCCEEECcCCCCCccccchHHHHh
Confidence 99999999999999999999 999 88876653
No 258
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.83 E-value=2.4e-21 Score=200.39 Aligned_cols=165 Identities=22% Similarity=0.279 Sum_probs=142.2
Q ss_pred ccCCCCCchHHHHHHHHHHHHcc-CCCCCCCCCC---CCCCCCccceeeeeC---------CCCcEEEEEeCCCCCcccC
Q 006907 35 SLLSPKGVNYEVAALMALKIKMR-DDLHVMDGWD---INSVDPCTWNMVACS---------AEGFVVSLEMASMGLSGTL 101 (626)
Q Consensus 35 ~~~~~~~~~~~~~al~~~k~~~~-~~~~~l~sW~---~~~~~~C~w~gv~C~---------~~~~v~~l~L~~~~l~~~~ 101 (626)
......+...|++||++||+++. ++.+.+.+|. ....++|.|.|++|. ...+|+.|+|++|+++ .+
T Consensus 18 ~~~~~~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~l 96 (328)
T 4fcg_A 18 YFQGSTALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QF 96 (328)
T ss_dssp CCC--CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SC
T ss_pred eeeccccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hc
Confidence 33445567789999999999994 6667778893 335789999999995 2368999999999998 78
Q ss_pred CccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhccccccceeeccccccCCchhhhhc--
Q 006907 102 SPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRLNNNKLSGQIPTLVAN-- 179 (626)
Q Consensus 102 ~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-- 179 (626)
|+.++++++|++|+|++|+++ .+|..++++++|++|+|++|+++ .+|..+..+++|+.|+|++|++.+.+|..+..
T Consensus 97 p~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~ 174 (328)
T 4fcg_A 97 PDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTD 174 (328)
T ss_dssp CSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC
T ss_pred ChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhcc
Confidence 888999999999999999999 89999999999999999999999 88999999999999999999999899987765
Q ss_pred -------CCCCccccCCCCCCCCCCCccccC
Q 006907 180 -------LTSLSFLDLSFNNLSGPTPKVLAN 203 (626)
Q Consensus 180 -------l~~L~~L~l~~N~l~~~~p~~~~~ 203 (626)
+++|+.|+|++|+|+ .+|..+.+
T Consensus 175 ~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~ 204 (328)
T 4fcg_A 175 ASGEHQGLVNLQSLRLEWTGIR-SLPASIAN 204 (328)
T ss_dssp -CCCEEESTTCCEEEEEEECCC-CCCGGGGG
T ss_pred chhhhccCCCCCEEECcCCCcC-cchHhhcC
Confidence 899999999999998 77776654
No 259
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.82 E-value=4e-20 Score=180.97 Aligned_cols=147 Identities=26% Similarity=0.309 Sum_probs=130.7
Q ss_pred CCCCccceeeeeCCC----------CcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEe
Q 006907 70 SVDPCTWNMVACSAE----------GFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLD 139 (626)
Q Consensus 70 ~~~~C~w~gv~C~~~----------~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 139 (626)
+.+.|+|.+|.|+.. ..++.|+|++|.|++..|..|.++++|++|+|++|+|+...+..|.++++|++|+
T Consensus 15 ~~~~Cs~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~ 94 (229)
T 3e6j_A 15 SQCSCSGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLD 94 (229)
T ss_dssp TTCEEETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCEEeCCEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEE
Confidence 468899999999742 3689999999999999999999999999999999999866667789999999999
Q ss_pred cccccccCCCCchhhccccccceeeccccccCCchhhhhcCCCCccccCCCCCCCCCCCccccCC-----ccccCCcccc
Q 006907 140 LSNNQLVGEIPSSLGFLTHLTYLRLNNNKLSGQIPTLVANLTSLSFLDLSFNNLSGPTPKVLANG-----YSFTGNSFLC 214 (626)
Q Consensus 140 L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~-----~~~~~n~~lc 214 (626)
|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+.++++|+.|+|++|+|++.++..+... +.+.+|++.|
T Consensus 95 Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 95 LGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDC 173 (229)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCT
T ss_pred CCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccC
Confidence 9999999777777899999999999999999 889999999999999999999998887766543 4578999887
Q ss_pred cCC
Q 006907 215 TSS 217 (626)
Q Consensus 215 ~~~ 217 (626)
.+.
T Consensus 174 ~c~ 176 (229)
T 3e6j_A 174 ECR 176 (229)
T ss_dssp TBG
T ss_pred Ccc
Confidence 653
No 260
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.79 E-value=2.1e-19 Score=174.63 Aligned_cols=144 Identities=24% Similarity=0.312 Sum_probs=129.9
Q ss_pred ccceeeeeCCC----------CcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccc
Q 006907 74 CTWNMVACSAE----------GFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNN 143 (626)
Q Consensus 74 C~w~gv~C~~~----------~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 143 (626)
|.|..|.|+.. ..++.|+|++|+|++..+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 11 C~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 11 CSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp EETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred ECCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 78999999742 26899999999999888889999999999999999999888999999999999999999
Q ss_pred cccCCCCchhhccccccceeeccccccCCchhhhhcCCCCccccCCCCCCCCCCCccccCC-----ccccCCcccccCC
Q 006907 144 QLVGEIPSSLGFLTHLTYLRLNNNKLSGQIPTLVANLTSLSFLDLSFNNLSGPTPKVLANG-----YSFTGNSFLCTSS 217 (626)
Q Consensus 144 ~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~-----~~~~~n~~lc~~~ 217 (626)
+|++..+..|..+++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++.++..+... +.+.+|++.|.+.
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 169 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCH 169 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCCc
Confidence 9996656668999999999999999998889999999999999999999999988877643 4678999988754
No 261
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.78 E-value=4.1e-19 Score=177.01 Aligned_cols=136 Identities=16% Similarity=0.143 Sum_probs=106.7
Q ss_pred CCcCceeccCCCceEEEEEe-CCccE--EEEEEecCCCcc------------------------cHHHHHHHHHHHHhcc
Q 006907 305 FSPKNILGQGGYGVVYKGCL-PNRMV--VAVKRLKDPNFT------------------------GEVQFQTEVEMIGLAL 357 (626)
Q Consensus 305 f~~~~~lG~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l~ 357 (626)
|.+.+.||+|+||.||+|.. .+|+. ||||+++..... ....+..|++.+..++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 56778999999999999987 67888 999987643211 0125788999999999
Q ss_pred CCcc--cceeeeeecCCceEEEEeecCC-C----ChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHH-hcCCCCeEe
Q 006907 358 HRNL--LRLYGFCMTPEERLLVYPYMPN-G----SVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLH-EQCNPKIIH 429 (626)
Q Consensus 358 h~nI--v~l~~~~~~~~~~~lv~E~~~~-g----sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH-~~~~~~ivH 429 (626)
|+++ ..++++ ...++||||+.+ | +|.++... .++..+..++.|++.||.||| +. +|+|
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-------~~~~~~~~i~~qi~~~l~~lH~~~---givH 194 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-------LKELDVEGIFNDVVENVKRLYQEA---ELVH 194 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-------GGGSCHHHHHHHHHHHHHHHHHTS---CEEC
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-------cChHHHHHHHHHHHHHHHHHHHHC---CEEe
Confidence 8864 333332 467899999942 4 67766532 224456789999999999999 88 9999
Q ss_pred cCCCCCcEEeCCCCcEEEeeccCcccc
Q 006907 430 RDVKAANILLDESFEAVVGDFGLAKLL 456 (626)
Q Consensus 430 ~Dlkp~NILl~~~~~~ki~DfG~a~~~ 456 (626)
|||||+|||+++ .++|+|||++...
T Consensus 195 rDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 195 ADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp SSCSTTSEEESS--SEEECCCTTCEET
T ss_pred CCCCHHHEEEcC--cEEEEECcccccC
Confidence 999999999998 9999999999754
No 262
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.77 E-value=5.2e-19 Score=171.86 Aligned_cols=144 Identities=20% Similarity=0.267 Sum_probs=129.0
Q ss_pred ccceeeeeCCC----------CcEEEEEeCCCCCcccCC-ccccCCcccceeeeccCCCCCCCCcccCCccccceEeccc
Q 006907 74 CTWNMVACSAE----------GFVVSLEMASMGLSGTLS-PSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSN 142 (626)
Q Consensus 74 C~w~gv~C~~~----------~~v~~l~L~~~~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 142 (626)
|.|..+.|+.. ..++.|+|++|.|++..+ ..|.++++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 C~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 11 CEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ECCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 68999999742 257899999999998865 4689999999999999999987778999999999999999
Q ss_pred ccccCCCCchhhccccccceeeccccccCCchhhhhcCCCCccccCCCCCCCCCCCccccCC-----ccccCCcccccCC
Q 006907 143 NQLVGEIPSSLGFLTHLTYLRLNNNKLSGQIPTLVANLTSLSFLDLSFNNLSGPTPKVLANG-----YSFTGNSFLCTSS 217 (626)
Q Consensus 143 N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~-----~~~~~n~~lc~~~ 217 (626)
|+|++..|..|..+++|++|+|++|+|++..|..|.++++|+.|+|++|+|++.+|..+... +.+.+|++.|.+.
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 99998888889999999999999999998889999999999999999999999999887753 4578999988754
No 263
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.76 E-value=1.8e-18 Score=166.50 Aligned_cols=145 Identities=27% Similarity=0.308 Sum_probs=126.3
Q ss_pred CccceeeeeCCC----------CcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEeccc
Q 006907 73 PCTWNMVACSAE----------GFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSN 142 (626)
Q Consensus 73 ~C~w~gv~C~~~----------~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 142 (626)
.|.|.+|.|+.. .+++.|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++
T Consensus 6 ~C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~ 85 (208)
T 2o6s_A 6 SCSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLST 85 (208)
T ss_dssp EEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred EECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCC
Confidence 378999999742 2689999999999988888899999999999999999976666789999999999999
Q ss_pred ccccCCCCchhhccccccceeeccccccCCchhhhhcCCCCccccCCCCCCCCCCCccccCC-----ccccCCcccccCC
Q 006907 143 NQLVGEIPSSLGFLTHLTYLRLNNNKLSGQIPTLVANLTSLSFLDLSFNNLSGPTPKVLANG-----YSFTGNSFLCTSS 217 (626)
Q Consensus 143 N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~-----~~~~~n~~lc~~~ 217 (626)
|++++..+..|..+++|++|+|++|+|++..+..+.++++|+.|++++|++++.++..+... +.+.+|++.|..+
T Consensus 86 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 165 (208)
T 2o6s_A 86 NQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 165 (208)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTT
T ss_pred CcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecCCC
Confidence 99997777778999999999999999997777778999999999999999998887766543 3567888876644
No 264
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.73 E-value=3.6e-18 Score=162.20 Aligned_cols=125 Identities=28% Similarity=0.338 Sum_probs=110.7
Q ss_pred ccceeeeeCCC----------CcEEEEEeCCCCCcccCCc-cccCCcccceeeeccCCCCCCCCcccCCccccceEeccc
Q 006907 74 CTWNMVACSAE----------GFVVSLEMASMGLSGTLSP-SIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSN 142 (626)
Q Consensus 74 C~w~gv~C~~~----------~~v~~l~L~~~~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 142 (626)
|.|..|.|+.. ..++.|+|++|.|++..+. .|+++++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 8 C~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 8 CEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred ECCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 78999999742 2688999999999877765 488999999999999999988899999999999999999
Q ss_pred ccccCCCCchhhccccccceeeccccccCCchhhhhcCCCCccccCCCCCCCCCCC
Q 006907 143 NQLVGEIPSSLGFLTHLTYLRLNNNKLSGQIPTLVANLTSLSFLDLSFNNLSGPTP 198 (626)
Q Consensus 143 N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 198 (626)
|+|++..|..|..+++|++|+|++|+|++.+|..+..+++|+.|+|++|++++..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 99998888889999999999999999998889999999999999999999988765
No 265
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.72 E-value=2.6e-18 Score=197.92 Aligned_cols=135 Identities=36% Similarity=0.517 Sum_probs=123.7
Q ss_pred EEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhccccccceeecccc
Q 006907 89 SLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRLNNNK 168 (626)
Q Consensus 89 ~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~ 168 (626)
.+++..|.+.|.+|..++++++|++|||++|+++|.+|.+|+++++|+.|+|++|+|+|.+|..|+++++|+.|||++|+
T Consensus 612 ~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~ 691 (768)
T 3rgz_A 612 PCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNK 691 (768)
T ss_dssp CSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSC
T ss_pred ccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCc
Confidence 34566688899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCchhhhhcCCCCccccCCCCCCCCCCCccc--c--CCccccCCcccccCCCCCccc
Q 006907 169 LSGQIPTLVANLTSLSFLDLSFNNLSGPTPKVL--A--NGYSFTGNSFLCTSSEHSCTG 223 (626)
Q Consensus 169 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~--~--~~~~~~~n~~lc~~~~~~c~~ 223 (626)
++|.+|..+.++++|+.|++++|+|+|.+|..- . ...++.||+.+|+.+...|..
T Consensus 692 l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~~C~~ 750 (768)
T 3rgz_A 692 LDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLPRCDP 750 (768)
T ss_dssp CEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSCCCCS
T ss_pred ccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCCcCCCC
Confidence 999999999999999999999999999999752 2 235688999999988767753
No 266
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.71 E-value=1.5e-17 Score=155.63 Aligned_cols=125 Identities=26% Similarity=0.301 Sum_probs=109.9
Q ss_pred ccceeeeeCCC----------CcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccc
Q 006907 74 CTWNMVACSAE----------GFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNN 143 (626)
Q Consensus 74 C~w~gv~C~~~----------~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 143 (626)
|.|.+|.|+.. ..++.|+|++|++++..+..|+++++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 7 C~~~~l~~~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 7 CSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp EETTEEECCSSCCSSCCTTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred eCCCEEEecCCCCccCCCCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 78999999742 36899999999999877778899999999999999999766677899999999999999
Q ss_pred cccCCCCchhhccccccceeeccccccCCchhhhhcCCCCccccCCCCCCCCCCC
Q 006907 144 QLVGEIPSSLGFLTHLTYLRLNNNKLSGQIPTLVANLTSLSFLDLSFNNLSGPTP 198 (626)
Q Consensus 144 ~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 198 (626)
+|++..+..+..+++|+.|+|++|+|++..+..+..+++|+.|+|++|++++..|
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 9997777778999999999999999996666667889999999999999998776
No 267
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.70 E-value=2.2e-17 Score=163.74 Aligned_cols=118 Identities=31% Similarity=0.303 Sum_probs=103.4
Q ss_pred cEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhccccccceeec
Q 006907 86 FVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRLN 165 (626)
Q Consensus 86 ~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~ 165 (626)
.++.|+|++|++++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|+
T Consensus 36 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 115 (251)
T 3m19_A 36 DTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLG 115 (251)
T ss_dssp TCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcC
Confidence 57889999999998888889999999999999999998888889999999999999999997777788899999999999
Q ss_pred cccccCCchhhhhcCCCCccccCCCCCCCCCCCccccC
Q 006907 166 NNKLSGQIPTLVANLTSLSFLDLSFNNLSGPTPKVLAN 203 (626)
Q Consensus 166 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~ 203 (626)
+|+|++..+..|.++++|+.|+|++|+|++.+|..+..
T Consensus 116 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 153 (251)
T 3m19_A 116 GNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDK 153 (251)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred CCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCc
Confidence 99999766667888999999999999999887766654
No 268
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.69 E-value=1.3e-18 Score=189.56 Aligned_cols=138 Identities=20% Similarity=0.209 Sum_probs=104.1
Q ss_pred ccceeeeeCCCCcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccC-CccccceEecccccccCCCCch
Q 006907 74 CTWNMVACSAEGFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFG-MLSELQTLDLSNNQLVGEIPSS 152 (626)
Q Consensus 74 C~w~gv~C~~~~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~g~~p~~ 152 (626)
|.+.++.|.....++.|+|++|.|++..|..|+++++|++|+|++|.|++.+|..+. ++++|+.|+|++|.|++..+
T Consensus 109 N~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~-- 186 (487)
T 3oja_A 109 NNISRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKG-- 186 (487)
T ss_dssp SCCCCEEECCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEEC--
T ss_pred CcCCCCCccccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccccc--
Confidence 456667776666788888888888888888888888888888888888887787776 78888888888888886522
Q ss_pred hhccccccceeeccccccCCchhhhhcCCCCccccCCCCCCCCCCCccccC-----CccccCCccccc
Q 006907 153 LGFLTHLTYLRLNNNKLSGQIPTLVANLTSLSFLDLSFNNLSGPTPKVLAN-----GYSFTGNSFLCT 215 (626)
Q Consensus 153 ~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-----~~~~~~n~~lc~ 215 (626)
+..+++|+.|+|++|+|++ +|..+..+++|+.|+|++|+|++ +|..+.. .+.+.+|++.|+
T Consensus 187 ~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~ 252 (487)
T 3oja_A 187 QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCG 252 (487)
T ss_dssp CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHH
T ss_pred cccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCc
Confidence 3358888888888888885 44458888888888888888886 4444433 234566666554
No 269
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.67 E-value=1.6e-16 Score=157.50 Aligned_cols=131 Identities=31% Similarity=0.305 Sum_probs=118.7
Q ss_pred CcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhccccccceee
Q 006907 85 GFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRL 164 (626)
Q Consensus 85 ~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 164 (626)
..++.|+|++|.|++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|
T Consensus 59 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 138 (251)
T 3m19_A 59 TKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRL 138 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred ccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEEC
Confidence 47999999999999999999999999999999999999877788999999999999999999777777899999999999
Q ss_pred ccccccCCchhhhhcCCCCccccCCCCCCCCCCCccccCC-----ccccCCccccc
Q 006907 165 NNNKLSGQIPTLVANLTSLSFLDLSFNNLSGPTPKVLANG-----YSFTGNSFLCT 215 (626)
Q Consensus 165 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~-----~~~~~n~~lc~ 215 (626)
++|+|++..+..|..+++|+.|+|++|+|++.+|..+... +.+.+|++.|.
T Consensus 139 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 139 NTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred cCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 9999997777789999999999999999999888777643 45788988776
No 270
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.66 E-value=1.9e-16 Score=158.77 Aligned_cols=115 Identities=30% Similarity=0.393 Sum_probs=64.7
Q ss_pred EEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhccccccceeecc
Q 006907 87 VVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRLNN 166 (626)
Q Consensus 87 v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~ 166 (626)
++.|+|++|++++..+..|.++++|++|+|++|+++...+..|.++++|++|+|++|++++..+..|..+++|+.|+|++
T Consensus 39 l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 118 (270)
T 2o6q_A 39 TKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDR 118 (270)
T ss_dssp CSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCS
T ss_pred CCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCC
Confidence 45555555555555445555666666666666666543333445566666666666666544444455556666666666
Q ss_pred ccccCCchhhhhcCCCCccccCCCCCCCCCCCccc
Q 006907 167 NKLSGQIPTLVANLTSLSFLDLSFNNLSGPTPKVL 201 (626)
Q Consensus 167 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~ 201 (626)
|++++..|..|.++++|+.|+|++|+|++.++..+
T Consensus 119 n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~ 153 (270)
T 2o6q_A 119 NQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVF 153 (270)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTT
T ss_pred CccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHc
Confidence 66655445555556666666666666655544433
No 271
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.66 E-value=3.1e-17 Score=168.23 Aligned_cols=133 Identities=32% Similarity=0.519 Sum_probs=87.0
Q ss_pred cEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhccccccceeec
Q 006907 86 FVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRLN 165 (626)
Q Consensus 86 ~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~ 165 (626)
.++.|+|++|.+++.+|..+..++ |++|+|++|++++.+|..|.++++|+.|+|++|.+++.+|. +..+++|++|+|+
T Consensus 175 ~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls 252 (313)
T 1ogq_A 175 LFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLR 252 (313)
T ss_dssp TCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECC
T ss_pred cCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECc
Confidence 344455555555555555555444 55555555555555556666666666666666666655544 6667777777777
Q ss_pred cccccCCchhhhhcCCCCccccCCCCCCCCCCCccccC-----CccccCCcccccCCCCCc
Q 006907 166 NNKLSGQIPTLVANLTSLSFLDLSFNNLSGPTPKVLAN-----GYSFTGNSFLCTSSEHSC 221 (626)
Q Consensus 166 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-----~~~~~~n~~lc~~~~~~c 221 (626)
+|++++.+|..+.++++|+.|+|++|+++|.+|.. .+ ...+.+|+++|+.+...|
T Consensus 253 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~~lc~~p~~~C 312 (313)
T 1ogq_A 253 NNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNKCLCGSPLPAC 312 (313)
T ss_dssp SSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSSEEESTTSSCC
T ss_pred CCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCCCccCCCCCCC
Confidence 77777777888888888888888888888777765 22 345778888888765555
No 272
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.66 E-value=1.9e-16 Score=150.44 Aligned_cols=124 Identities=26% Similarity=0.369 Sum_probs=79.0
Q ss_pred EEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhccccccceeeccccc
Q 006907 90 LEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRLNNNKL 169 (626)
Q Consensus 90 l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l 169 (626)
+++++|+|+ .+|..+. ++|++|+|++|+|+ .+|..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|+|
T Consensus 15 l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l 90 (193)
T 2wfh_A 15 VRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRL 90 (193)
T ss_dssp EECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCcc
Confidence 444555555 3444432 46677777777776 5666677777777777777777766566677777777777777777
Q ss_pred cCCchhhhhcCCCCccccCCCCCCCCCCCccccC-----CccccCCcccccCC
Q 006907 170 SGQIPTLVANLTSLSFLDLSFNNLSGPTPKVLAN-----GYSFTGNSFLCTSS 217 (626)
Q Consensus 170 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-----~~~~~~n~~lc~~~ 217 (626)
++..|..|..+++|+.|+|++|+|++.++..+.. .+.+.+|++.|.+.
T Consensus 91 ~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~ 143 (193)
T 2wfh_A 91 RCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCN 143 (193)
T ss_dssp CBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred CEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCc
Confidence 7665666777777777777777777655554443 23456677766543
No 273
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.65 E-value=1.8e-16 Score=178.24 Aligned_cols=156 Identities=19% Similarity=0.180 Sum_probs=120.3
Q ss_pred cCCCCCCCCCCC---CCCCCccce----eeeeCCC----------CcEEEEEeCCCCCcccCCccccCCcccceeeeccC
Q 006907 57 RDDLHVMDGWDI---NSVDPCTWN----MVACSAE----------GFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNN 119 (626)
Q Consensus 57 ~~~~~~l~sW~~---~~~~~C~w~----gv~C~~~----------~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N 119 (626)
.|+...+++|.. ...+||.+. .|.|+.. ..++.|||++|.|++..+.+|.++++|++|+|++|
T Consensus 7 ~~~~~~~~~~~~~~p~~~~~c~~~~~~~~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N 86 (635)
T 4g8a_A 7 KDDDDKLAAANSSIPESWEPCVEVVPNITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRC 86 (635)
T ss_dssp ------------------CCSEEEETTTEEECTTSCCSSCCSSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTC
T ss_pred CCCcchhhcccCCCCCCCCCccccCCCCEEECCCCCcCccCCCCCcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCC
Confidence 344445666642 223567543 4789632 36899999999999888899999999999999999
Q ss_pred CCCCCCCcccCCccccceEecccccccCCCCchhhccccccceeeccccccCCchhhhhcCCCCccccCCCCCCCCC-CC
Q 006907 120 QLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRLNNNKLSGQIPTLVANLTSLSFLDLSFNNLSGP-TP 198 (626)
Q Consensus 120 ~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~-~p 198 (626)
+|++..|..|.+|++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|+++++|+.|+|++|.+++. +|
T Consensus 87 ~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~ 166 (635)
T 4g8a_A 87 EIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLP 166 (635)
T ss_dssp CCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCC
T ss_pred cCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCc
Confidence 99977778899999999999999999977777899999999999999999976667899999999999999999874 56
Q ss_pred ccccCC-----ccccCCcc
Q 006907 199 KVLANG-----YSFTGNSF 212 (626)
Q Consensus 199 ~~~~~~-----~~~~~n~~ 212 (626)
..+... ..+.+|..
T Consensus 167 ~~~~~l~~L~~L~L~~N~l 185 (635)
T 4g8a_A 167 EYFSNLTNLEHLDLSSNKI 185 (635)
T ss_dssp GGGGGCTTCCEEECCSSCC
T ss_pred hhhccchhhhhhcccCccc
Confidence 666543 24556654
No 274
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.64 E-value=1.7e-16 Score=164.69 Aligned_cols=148 Identities=12% Similarity=0.082 Sum_probs=100.8
Q ss_pred HHHHHhCCCCcCceeccCCCceEEEEEeCCccEEEEEEecCCCc-----c---------cHHHHHHHHHHHHhccCCccc
Q 006907 297 ELQIATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNF-----T---------GEVQFQTEVEMIGLALHRNLL 362 (626)
Q Consensus 297 ~~~~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-----~---------~~~~~~~E~~~l~~l~h~nIv 362 (626)
.+.....-|++.+.||+|++|.||+|...+|+.||||+++.... . .......+.++.....|+|++
T Consensus 89 ~L~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~ 168 (397)
T 4gyi_A 89 THAARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMK 168 (397)
T ss_dssp HHHHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHH
Confidence 33333344888999999999999999988999999998763210 0 011122222222222344444
Q ss_pred ceeeeeec------CCceEEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCc
Q 006907 363 RLYGFCMT------PEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAAN 436 (626)
Q Consensus 363 ~l~~~~~~------~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~N 436 (626)
+++..... ....+|||||+++++|..+.. . +....++.|++.+|.|||+. +||||||||.|
T Consensus 169 rL~~~gv~vp~p~~~~~~~LVME~i~G~~L~~l~~--------~--~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~N 235 (397)
T 4gyi_A 169 ALYEEGFPVPEPIAQSRHTIVMSLVDALPMRQVSS--------V--PDPASLYADLIALILRLAKH---GLIHGDFNEFN 235 (397)
T ss_dssp HHHHTTCSCCCEEEEETTEEEEECCSCEEGGGCCC--------C--SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTS
T ss_pred HHHhcCCCCCeeeeccCceEEEEecCCccHhhhcc--------c--HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHH
Confidence 33322111 123479999999988865432 1 12356789999999999999 99999999999
Q ss_pred EEeCCCC----------cEEEeeccCccccC
Q 006907 437 ILLDESF----------EAVVGDFGLAKLLD 457 (626)
Q Consensus 437 ILl~~~~----------~~ki~DfG~a~~~~ 457 (626)
||+++++ .+.|+||+-+....
T Consensus 236 ILl~~dgd~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 236 ILIREEKDAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp EEEEEEECSSCTTSEEEEEEECCCTTCEETT
T ss_pred EEEeCCCCcccccccccceEEEEeCCcccCC
Confidence 9998776 38999999876543
No 275
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.64 E-value=4.6e-16 Score=156.13 Aligned_cols=133 Identities=27% Similarity=0.269 Sum_probs=100.7
Q ss_pred CcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhccccccceee
Q 006907 85 GFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRL 164 (626)
Q Consensus 85 ~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 164 (626)
..++.|+|++|.+++..+..|+++++|++|+|++|++++..|..|+++++|++|+|++|++++..|..+..+++|+.|+|
T Consensus 85 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 164 (272)
T 3rfs_A 85 TNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDL 164 (272)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEEC
Confidence 46778888888888777777788888888888888888666666788888888888888888666666778888888888
Q ss_pred ccccccCCchhhhhcCCCCccccCCCCCCCCCCCccccCC-----ccccCCcccccCC
Q 006907 165 NNNKLSGQIPTLVANLTSLSFLDLSFNNLSGPTPKVLANG-----YSFTGNSFLCTSS 217 (626)
Q Consensus 165 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~-----~~~~~n~~lc~~~ 217 (626)
++|++++..+..+.++++|+.|++++|++++.+|..+... ..+.+|++.|.++
T Consensus 165 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 222 (272)
T 3rfs_A 165 SYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 222 (272)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCc
Confidence 8888886666667788888888888888887777665542 3466777766543
No 276
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.63 E-value=3.3e-16 Score=148.64 Aligned_cols=127 Identities=27% Similarity=0.394 Sum_probs=112.0
Q ss_pred EEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCc-ccCCccccceEecccccccCCCCchhhccccccceeecc
Q 006907 88 VSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPV-EFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRLNN 166 (626)
Q Consensus 88 ~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~ 166 (626)
+.|++++|+|+ .+|..+.. +|++|+|++|+|++..|. .|+++++|++|+|++|+|++..|..|..+++|+.|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 57999999995 67776654 999999999999966554 489999999999999999999999999999999999999
Q ss_pred ccccCCchhhhhcCCCCccccCCCCCCCCCCCccccCC-----ccccCCcccccCC
Q 006907 167 NKLSGQIPTLVANLTSLSFLDLSFNNLSGPTPKVLANG-----YSFTGNSFLCTSS 217 (626)
Q Consensus 167 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~-----~~~~~n~~lc~~~ 217 (626)
|+|++..|..|.++++|+.|+|++|+|++.+|..+... +.+.+|++.|.+.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 99998888889999999999999999999999887653 4578999887644
No 277
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.63 E-value=2.3e-16 Score=165.17 Aligned_cols=128 Identities=27% Similarity=0.295 Sum_probs=102.4
Q ss_pred ccceeeeeCCC----------CcEEEEEeCCCCCcccCCcccc-CCcccceeeeccCCCCCCCCcccCCccccceEeccc
Q 006907 74 CTWNMVACSAE----------GFVVSLEMASMGLSGTLSPSIG-NLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSN 142 (626)
Q Consensus 74 C~w~gv~C~~~----------~~v~~l~L~~~~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 142 (626)
|.|..|.|+.. ..++.|+|++|.|++..+..|. ++++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 18 C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 18 CASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp EETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 67888888631 2477889999998888777777 888888888888888876667788888888888888
Q ss_pred ccccCCCCchhhccccccceeeccccccCCchhhhhcCCCCccccCCCCCCCCCCCccc
Q 006907 143 NQLVGEIPSSLGFLTHLTYLRLNNNKLSGQIPTLVANLTSLSFLDLSFNNLSGPTPKVL 201 (626)
Q Consensus 143 N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~ 201 (626)
|+|++..+..|..+++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++.++..+
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~ 156 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELI 156 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGT
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHh
Confidence 88887666678888888888888888887667788888888888888888887655543
No 278
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.63 E-value=7.4e-16 Score=146.29 Aligned_cols=122 Identities=28% Similarity=0.321 Sum_probs=111.3
Q ss_pred ccceeeeeCCC----------CcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccc
Q 006907 74 CTWNMVACSAE----------GFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNN 143 (626)
Q Consensus 74 C~w~gv~C~~~----------~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 143 (626)
|.|..|.|+.. ..++.|+|++|.|+ .+|..|.++++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 10 C~~~~l~~~~~~l~~ip~~~~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 10 CLDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred eCCCEEEcCCCCCCcCCCCCCCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 67889999642 36899999999998 77899999999999999999999888889999999999999999
Q ss_pred cccCCCCchhhccccccceeeccccccCCchhhhhcCCCCccccCCCCCCCCC
Q 006907 144 QLVGEIPSSLGFLTHLTYLRLNNNKLSGQIPTLVANLTSLSFLDLSFNNLSGP 196 (626)
Q Consensus 144 ~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 196 (626)
+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++...
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCD 141 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecC
Confidence 99988888999999999999999999966666799999999999999999754
No 279
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.61 E-value=1.6e-15 Score=151.99 Aligned_cols=129 Identities=27% Similarity=0.279 Sum_probs=62.4
Q ss_pred EEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhccccccceeecc
Q 006907 87 VVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRLNN 166 (626)
Q Consensus 87 v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~ 166 (626)
++.|+|++|.+++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|.|++..+..|..+++|+.|+|++
T Consensus 87 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 166 (270)
T 2o6q_A 87 LETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYN 166 (270)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecC
Confidence 44444554444444444444455555555555555544444445555555555555555533333345555555555555
Q ss_pred ccccCCchhhhhcCCCCccccCCCCCCCCCCCccccC-----CccccCCccccc
Q 006907 167 NKLSGQIPTLVANLTSLSFLDLSFNNLSGPTPKVLAN-----GYSFTGNSFLCT 215 (626)
Q Consensus 167 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-----~~~~~~n~~lc~ 215 (626)
|++++..+..|.++++|+.|+|++|+|++.++..+.. .+.+.+|++.|.
T Consensus 167 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 220 (270)
T 2o6q_A 167 NQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCT 220 (270)
T ss_dssp SCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCS
T ss_pred CcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCC
Confidence 5555433344555555555555555555444433332 123445555444
No 280
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.61 E-value=6e-16 Score=150.14 Aligned_cols=114 Identities=21% Similarity=0.209 Sum_probs=108.3
Q ss_pred CcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhccccccceee
Q 006907 85 GFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRL 164 (626)
Q Consensus 85 ~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 164 (626)
..++.|+|++|.|++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|+.|+|
T Consensus 57 ~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 136 (220)
T 2v70_A 57 PQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSL 136 (220)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEEC
T ss_pred CCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEEC
Confidence 46999999999999998889999999999999999999888888999999999999999999988999999999999999
Q ss_pred ccccccCCchhhhhcCCCCccccCCCCCCCCCCC
Q 006907 165 NNNKLSGQIPTLVANLTSLSFLDLSFNNLSGPTP 198 (626)
Q Consensus 165 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 198 (626)
++|+|++..|..|..+++|+.|+|++|++++..+
T Consensus 137 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 137 YDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp TTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 9999998889999999999999999999997655
No 281
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.60 E-value=2e-15 Score=152.91 Aligned_cols=131 Identities=27% Similarity=0.258 Sum_probs=97.5
Q ss_pred CcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhccccccceee
Q 006907 85 GFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRL 164 (626)
Q Consensus 85 ~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 164 (626)
..++.|+|++|.|+ .+|..+..+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|
T Consensus 77 ~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 155 (290)
T 1p9a_G 77 PVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSL 155 (290)
T ss_dssp TTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEEC
Confidence 45777788888776 56777788888888888888888666677888888888888888888666666778888888888
Q ss_pred ccccccCCchhhhhcCCCCccccCCCCCCCCCCCccccC-----CccccCCcccccCC
Q 006907 165 NNNKLSGQIPTLVANLTSLSFLDLSFNNLSGPTPKVLAN-----GYSFTGNSFLCTSS 217 (626)
Q Consensus 165 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-----~~~~~~n~~lc~~~ 217 (626)
++|+|++..+..|.++++|+.|+|++|+|+. +|..+.. ...+.+|++.|.+.
T Consensus 156 ~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~-ip~~~~~~~~L~~l~L~~Np~~C~c~ 212 (290)
T 1p9a_G 156 ANNNLTELPAGLLNGLENLDTLLLQENSLYT-IPKGFFGSHLLPFAFLHGNPWLCNCE 212 (290)
T ss_dssp TTSCCSCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCCCSEEECCSCCBCCSGG
T ss_pred CCCcCCccCHHHhcCcCCCCEEECCCCcCCc-cChhhcccccCCeEEeCCCCccCcCc
Confidence 8888885555566778888888888888884 4444332 23467888877643
No 282
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.60 E-value=6.4e-16 Score=140.09 Aligned_cols=112 Identities=22% Similarity=0.232 Sum_probs=103.5
Q ss_pred CcEEEEEeCCCCCc-ccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhcccccccee
Q 006907 85 GFVVSLEMASMGLS-GTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLR 163 (626)
Q Consensus 85 ~~v~~l~L~~~~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 163 (626)
.+++.|+|++|.++ +.+|..+..+++|++|+|++|++++. ..++++++|++|+|++|.+++.+|..+..+++|+.|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 46899999999999 88999999999999999999999965 7899999999999999999988999899999999999
Q ss_pred eccccccCC-chhhhhcCCCCccccCCCCCCCCCCC
Q 006907 164 LNNNKLSGQ-IPTLVANLTSLSFLDLSFNNLSGPTP 198 (626)
Q Consensus 164 l~~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~p 198 (626)
|++|++++. .|..+..+++|+.|++++|++++.++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 130 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLND 130 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTT
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHH
Confidence 999999963 34889999999999999999998776
No 283
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.59 E-value=1.6e-15 Score=156.58 Aligned_cols=118 Identities=17% Similarity=0.198 Sum_probs=100.2
Q ss_pred CcEEEEEeCCCCCcccCCccccC---------CcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhc
Q 006907 85 GFVVSLEMASMGLSGTLSPSIGN---------LTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGF 155 (626)
Q Consensus 85 ~~v~~l~L~~~~l~~~~~~~~~~---------l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~ 155 (626)
.+++.|+|++|++.+.+|..++. +++|++|+|++|+|+ .+|..++++++|++|+|++|+++ .+|..+..
T Consensus 150 ~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~-~l~~~l~~ 227 (328)
T 4fcg_A 150 NRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIHH 227 (328)
T ss_dssp TTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC-CCCGGGGG
T ss_pred cCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC-cCchhhcc
Confidence 46888999998888888887664 888999999999888 78888888888999999988888 46777888
Q ss_pred cccccceeeccccccCCchhhhhcCCCCccccCCCCCCCCCCCccccCC
Q 006907 156 LTHLTYLRLNNNKLSGQIPTLVANLTSLSFLDLSFNNLSGPTPKVLANG 204 (626)
Q Consensus 156 l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~ 204 (626)
+++|+.|+|++|++.+.+|..+.++++|+.|+|++|++.+.+|..+.+.
T Consensus 228 l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l 276 (328)
T 4fcg_A 228 LPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRL 276 (328)
T ss_dssp CTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGC
T ss_pred CCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcC
Confidence 8888888888888888888888888888888888888888888777653
No 284
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.59 E-value=1.2e-15 Score=154.12 Aligned_cols=117 Identities=26% Similarity=0.248 Sum_probs=64.2
Q ss_pred cEEEEEeCCCC-CcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhccccccceee
Q 006907 86 FVVSLEMASMG-LSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRL 164 (626)
Q Consensus 86 ~v~~l~L~~~~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 164 (626)
.++.|+|++|. +....|..|..+++|++|+|++|++++..|..|.++++|++|+|++|++++..+..|..+++|+.|+|
T Consensus 81 ~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 160 (285)
T 1ozn_A 81 LLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFL 160 (285)
T ss_dssp TCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEEC
Confidence 45556666554 44444555555555666666655555555555555555555555555555444444555555555555
Q ss_pred ccccccCCchhhhhcCCCCccccCCCCCCCCCCCcccc
Q 006907 165 NNNKLSGQIPTLVANLTSLSFLDLSFNNLSGPTPKVLA 202 (626)
Q Consensus 165 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~ 202 (626)
++|++++..+..+..+++|+.|++++|++++.+|..+.
T Consensus 161 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 198 (285)
T 1ozn_A 161 HGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFR 198 (285)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTT
T ss_pred CCCcccccCHHHhcCccccCEEECCCCcccccCHhHcc
Confidence 55555543333455555555555555555555554443
No 285
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.59 E-value=2.7e-15 Score=138.90 Aligned_cols=112 Identities=24% Similarity=0.258 Sum_probs=102.5
Q ss_pred CcEEEEEeCCCCCc-ccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhcccccccee
Q 006907 85 GFVVSLEMASMGLS-GTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLR 163 (626)
Q Consensus 85 ~~v~~l~L~~~~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 163 (626)
..++.|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|+.|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 45899999999998 88999999999999999999999965 7899999999999999999988999888999999999
Q ss_pred eccccccCCc-hhhhhcCCCCccccCCCCCCCCCCC
Q 006907 164 LNNNKLSGQI-PTLVANLTSLSFLDLSFNNLSGPTP 198 (626)
Q Consensus 164 l~~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~~p 198 (626)
|++|++++.. +..+..+++|+.|++++|++++.++
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~ 137 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLND 137 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTT
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHH
Confidence 9999999532 2789999999999999999998776
No 286
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.58 E-value=4.6e-16 Score=177.32 Aligned_cols=156 Identities=28% Similarity=0.361 Sum_probs=80.3
Q ss_pred chHHHHHHHHHHHHccCCC-CCCCCCCCCCCCCccceeeeeCCC------------------------------------
Q 006907 42 VNYEVAALMALKIKMRDDL-HVMDGWDINSVDPCTWNMVACSAE------------------------------------ 84 (626)
Q Consensus 42 ~~~~~~al~~~k~~~~~~~-~~l~sW~~~~~~~C~w~gv~C~~~------------------------------------ 84 (626)
...++++|+++..+...+. ..-.+|....+..+.|.+++++..
T Consensus 130 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~L~~n~~~~~~~~~l~~l~Ls~~~i~~~~~~ 209 (727)
T 4b8c_D 130 VDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVSTPLTPKIELFANGKDEANQALLQHKKLSQYSIDEDDDI 209 (727)
T ss_dssp --CCCHHHHHHHHHHHHHHTTC----------------------------------------------------------
T ss_pred cccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecCCccceEEeeCCCCCcchhhHhhcCccCcccccCcccc
Confidence 4456789999987764322 233456444444566777665431
Q ss_pred --------------CcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCC
Q 006907 85 --------------GFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIP 150 (626)
Q Consensus 85 --------------~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p 150 (626)
..++.|+|++|.|. .+|..+.++++|++|+|++|+|+ .+|..|++|++|++|+|++|+|+ .+|
T Consensus 210 ~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp 286 (727)
T 4b8c_D 210 ENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLP 286 (727)
T ss_dssp ------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCC
T ss_pred ccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccC
Confidence 12334555555555 45555556666666666666666 56666666666666666666666 556
Q ss_pred chhhccccccceeeccccccCCchhhhhcCCCCccccCCCCCCCCCCCccc
Q 006907 151 SSLGFLTHLTYLRLNNNKLSGQIPTLVANLTSLSFLDLSFNNLSGPTPKVL 201 (626)
Q Consensus 151 ~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~ 201 (626)
..|+.|++|++|+|++|.|+ .+|..|.+|++|+.|+|++|+|++.+|..+
T Consensus 287 ~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~ 336 (727)
T 4b8c_D 287 AELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKIL 336 (727)
T ss_dssp SSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHH
T ss_pred hhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHH
Confidence 66666666666666666665 555556666666666666666666665554
No 287
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.57 E-value=2.2e-15 Score=162.66 Aligned_cols=133 Identities=20% Similarity=0.204 Sum_probs=122.1
Q ss_pred CcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhccccccceee
Q 006907 85 GFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRL 164 (626)
Q Consensus 85 ~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 164 (626)
..++.|+|++|.+++.+|..|+++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|..+++|+.|+|
T Consensus 275 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 354 (455)
T 3v47_A 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDL 354 (455)
T ss_dssp SCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEEC
T ss_pred cCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEEC
Confidence 36899999999999999999999999999999999999888999999999999999999999888999999999999999
Q ss_pred ccccccCCchhhhhcCCCCccccCCCCCCCCCCCccccC-----CccccCCcccccCC
Q 006907 165 NNNKLSGQIPTLVANLTSLSFLDLSFNNLSGPTPKVLAN-----GYSFTGNSFLCTSS 217 (626)
Q Consensus 165 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-----~~~~~~n~~lc~~~ 217 (626)
++|++++..|..|..+++|+.|+|++|+|++.++..+.. ...+.+|++.|.++
T Consensus 355 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 355 SYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 999999888999999999999999999999988776654 34578999988765
No 288
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.57 E-value=3.3e-15 Score=144.93 Aligned_cols=112 Identities=20% Similarity=0.194 Sum_probs=104.4
Q ss_pred CcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhccccccceee
Q 006907 85 GFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRL 164 (626)
Q Consensus 85 ~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 164 (626)
..++.|+|++|.|++..|..|.++++|++|+|++|+|+...+..|.++++|++|+|++|+|++..|..|..+++|+.|+|
T Consensus 56 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 135 (220)
T 2v9t_B 56 KKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSL 135 (220)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEEC
Confidence 47999999999999999999999999999999999999665566899999999999999999988999999999999999
Q ss_pred ccccccCCchhhhhcCCCCccccCCCCCCCCC
Q 006907 165 NNNKLSGQIPTLVANLTSLSFLDLSFNNLSGP 196 (626)
Q Consensus 165 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 196 (626)
++|+|++..+..|..+++|+.|+|++|++...
T Consensus 136 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 167 (220)
T 2v9t_B 136 YDNKLQTIAKGTFSPLRAIQTMHLAQNPFICD 167 (220)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CCCcCCEECHHHHhCCCCCCEEEeCCCCcCCC
Confidence 99999987778899999999999999999753
No 289
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.57 E-value=2.9e-15 Score=161.60 Aligned_cols=132 Identities=23% Similarity=0.260 Sum_probs=117.3
Q ss_pred CCcccee--eeeCCC---------CcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCC-CcccCCccccceEe
Q 006907 72 DPCTWNM--VACSAE---------GFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPI-PVEFGMLSELQTLD 139 (626)
Q Consensus 72 ~~C~w~g--v~C~~~---------~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~ 139 (626)
+.|.|.+ |.|+.. .+++.|+|++|.+++..|..|+++++|++|+|++|.+.+.+ |..|.++++|++|+
T Consensus 6 ~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~ 85 (455)
T 3v47_A 6 SECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILK 85 (455)
T ss_dssp -CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEE
T ss_pred ceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEe
Confidence 4577666 889742 36999999999999999999999999999999999998766 56799999999999
Q ss_pred cccccccCCCCchhhccccccceeeccccccCCchhh--hhcCCCCccccCCCCCCCCCCCcc-ccC
Q 006907 140 LSNNQLVGEIPSSLGFLTHLTYLRLNNNKLSGQIPTL--VANLTSLSFLDLSFNNLSGPTPKV-LAN 203 (626)
Q Consensus 140 L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~l~~L~~L~l~~N~l~~~~p~~-~~~ 203 (626)
|++|++++..|..|.++++|++|+|++|++++.+|.. +.++++|+.|+|++|++++..|.. +.+
T Consensus 86 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~ 152 (455)
T 3v47_A 86 LDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLN 152 (455)
T ss_dssp CTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGG
T ss_pred CCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCC
Confidence 9999999888999999999999999999999877765 999999999999999999998875 443
No 290
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.57 E-value=3.9e-15 Score=166.77 Aligned_cols=134 Identities=21% Similarity=0.220 Sum_probs=116.1
Q ss_pred CCCccce----eeeeCC----------CCcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccc
Q 006907 71 VDPCTWN----MVACSA----------EGFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQ 136 (626)
Q Consensus 71 ~~~C~w~----gv~C~~----------~~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 136 (626)
.+||.|. .|.|+. ..+++.|+|++|.+++..+..|.++++|++|+|++|++++..|..|+++++|+
T Consensus 4 ~~~c~~~~~~~~~~c~~~~l~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~ 83 (606)
T 3vq2_A 4 LNPCIEVVPNITYQCMDQKLSKVPDDIPSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLS 83 (606)
T ss_dssp --CCEEEETTTEEECTTSCCSSCCTTSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCC
T ss_pred CCCceecCCCCceEccCCCcccCCCCCCCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcC
Confidence 4677663 588863 24689999999999998888999999999999999999988888999999999
Q ss_pred eEecccccccCCCCchhhccccccceeeccccccCCchhhhhcCCCCccccCCCCCCCC-CCCccccCC
Q 006907 137 TLDLSNNQLVGEIPSSLGFLTHLTYLRLNNNKLSGQIPTLVANLTSLSFLDLSFNNLSG-PTPKVLANG 204 (626)
Q Consensus 137 ~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~p~~~~~~ 204 (626)
+|+|++|++++..|..|+++++|++|+|++|++++..|..+.++++|++|++++|++++ .+|..+++.
T Consensus 84 ~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l 152 (606)
T 3vq2_A 84 NLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNL 152 (606)
T ss_dssp EEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTC
T ss_pred EeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhc
Confidence 99999999998889999999999999999999997776889999999999999999986 678877654
No 291
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.56 E-value=2.6e-15 Score=153.18 Aligned_cols=115 Identities=23% Similarity=0.297 Sum_probs=55.8
Q ss_pred EEEEEeCCCCCcccCCccccCCcccceeeeccCCCCC-CCCcccCCccccceEecccccccCCCCchhhccccccceeec
Q 006907 87 VVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSG-PIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRLN 165 (626)
Q Consensus 87 v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~ 165 (626)
++.|+|++|.+.+..+..|.++++|++|+|++|++++ .+|..+..+++|++|+|++|++++..|..|..+++|+.|+|+
T Consensus 128 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 207 (306)
T 2z66_A 128 LIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMS 207 (306)
T ss_dssp CCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECT
T ss_pred CCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECC
Confidence 4444444444444444444444455555555554443 244444455555555555555554444445555555555555
Q ss_pred cccccCCchhhhhcCCCCccccCCCCCCCCCCCccc
Q 006907 166 NNKLSGQIPTLVANLTSLSFLDLSFNNLSGPTPKVL 201 (626)
Q Consensus 166 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~ 201 (626)
+|++++..+..+..+++|+.|++++|++++.+|..+
T Consensus 208 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 243 (306)
T 2z66_A 208 HNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQEL 243 (306)
T ss_dssp TSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSC
T ss_pred CCccCccChhhccCcccCCEeECCCCCCcccCHHHH
Confidence 555544333444445555555555555554444433
No 292
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.56 E-value=8.1e-15 Score=136.05 Aligned_cols=108 Identities=30% Similarity=0.332 Sum_probs=95.8
Q ss_pred EEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhccccccceeeccc
Q 006907 88 VSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRLNNN 167 (626)
Q Consensus 88 ~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N 167 (626)
+.|++++|+|+. +|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|
T Consensus 12 ~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 356777788874 666553 89999999999999888999999999999999999999777777899999999999999
Q ss_pred cccCCchhhhhcCCCCccccCCCCCCCCCCC
Q 006907 168 KLSGQIPTLVANLTSLSFLDLSFNNLSGPTP 198 (626)
Q Consensus 168 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 198 (626)
+|++..+..|.++++|+.|+|++|+++...+
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 9997777789999999999999999997765
No 293
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.56 E-value=7e-15 Score=147.71 Aligned_cols=119 Identities=19% Similarity=0.146 Sum_probs=107.2
Q ss_pred cEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhccccccceeec
Q 006907 86 FVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRLN 165 (626)
Q Consensus 86 ~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~ 165 (626)
.++.|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..|..|..+++|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 58999999999998888899999999999999999997777789999999999999999998888899999999999999
Q ss_pred cccccCCchhhhhcCCCCccccCCCCCCCCC-CCccccCC
Q 006907 166 NNKLSGQIPTLVANLTSLSFLDLSFNNLSGP-TPKVLANG 204 (626)
Q Consensus 166 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~-~p~~~~~~ 204 (626)
+|++++..+..+.++++|+.|++++|++++. +|..+.+.
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l 148 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNL 148 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGC
T ss_pred CCCccccCchhcccCCCCCEEECcCCccceecCchhhccC
Confidence 9999977666899999999999999999874 57776653
No 294
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.55 E-value=9.7e-15 Score=140.16 Aligned_cols=115 Identities=28% Similarity=0.266 Sum_probs=104.9
Q ss_pred CcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhccccccceee
Q 006907 85 GFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRL 164 (626)
Q Consensus 85 ~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 164 (626)
.+++.|+|++|.+++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|+|++..+..|..+++|+.|+|
T Consensus 52 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 131 (208)
T 2o6s_A 52 TSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRL 131 (208)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred ccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEEC
Confidence 46999999999999887778899999999999999999776777899999999999999999777777899999999999
Q ss_pred ccccccCCchhhhhcCCCCccccCCCCCCCCCCCc
Q 006907 165 NNNKLSGQIPTLVANLTSLSFLDLSFNNLSGPTPK 199 (626)
Q Consensus 165 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 199 (626)
++|++++..+..+.++++|+.|++++|++.+..|.
T Consensus 132 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 166 (208)
T 2o6s_A 132 YQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPG 166 (208)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTTT
T ss_pred CCCccceeCHHHhccCCCccEEEecCCCeecCCCC
Confidence 99999977777789999999999999999988774
No 295
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.55 E-value=2.5e-15 Score=166.16 Aligned_cols=130 Identities=24% Similarity=0.296 Sum_probs=113.9
Q ss_pred CccceeeeeCCC------------CcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEec
Q 006907 73 PCTWNMVACSAE------------GFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDL 140 (626)
Q Consensus 73 ~C~w~gv~C~~~------------~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 140 (626)
.|.|.|| |+.. .+++.|+|++|.+++..|..|.++++|++|+|++|++++..|..|+++++|++|+|
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 81 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDL 81 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEEC
Confidence 5899998 8632 36999999999999999999999999999999999999888889999999999999
Q ss_pred ccccccCCCCchhhccccccceeeccccccC-CchhhhhcCCCCccccCCCCCCCCCCC-ccccC
Q 006907 141 SNNQLVGEIPSSLGFLTHLTYLRLNNNKLSG-QIPTLVANLTSLSFLDLSFNNLSGPTP-KVLAN 203 (626)
Q Consensus 141 ~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~ 203 (626)
++|++++..|..|+.+++|++|+|++|++++ .+|..+.++++|+.|++++|++.+.+| ..+.+
T Consensus 82 s~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~ 146 (549)
T 2z81_A 82 SDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAG 146 (549)
T ss_dssp TTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTT
T ss_pred CCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhc
Confidence 9999998777779999999999999999996 467789999999999999999655555 45554
No 296
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.54 E-value=1e-14 Score=135.83 Aligned_cols=108 Identities=28% Similarity=0.306 Sum_probs=96.4
Q ss_pred EEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhccccccceeeccc
Q 006907 88 VSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRLNNN 167 (626)
Q Consensus 88 ~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N 167 (626)
+.+++++|+|+ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 57899999996 6777664 89999999999999888999999999999999999999766666899999999999999
Q ss_pred cccCCchhhhhcCCCCccccCCCCCCCCCCC
Q 006907 168 KLSGQIPTLVANLTSLSFLDLSFNNLSGPTP 198 (626)
Q Consensus 168 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 198 (626)
+|++..+..|..+++|+.|+|++|++....+
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 9997666679999999999999999986554
No 297
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.54 E-value=2.3e-14 Score=133.88 Aligned_cols=127 Identities=26% Similarity=0.300 Sum_probs=107.5
Q ss_pred EEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhccccccceeecc
Q 006907 87 VVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRLNN 166 (626)
Q Consensus 87 v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~ 166 (626)
.+.+++++++++. +|..+ .++|++|+|++|++++..+..|.++++|++|+|++|+|++..+..|..+++|+.|+|++
T Consensus 9 ~~~l~~~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLTS-VPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCSS-CCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCcc-CCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 3578999999984 45444 37999999999999977777789999999999999999977777789999999999999
Q ss_pred ccccCCchhhhhcCCCCccccCCCCCCCCCCCccccC-----CccccCCcccccC
Q 006907 167 NKLSGQIPTLVANLTSLSFLDLSFNNLSGPTPKVLAN-----GYSFTGNSFLCTS 216 (626)
Q Consensus 167 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-----~~~~~~n~~lc~~ 216 (626)
|+|++..+..+.++++|+.|++++|+|++.++..+.. .+.+.+|++.|..
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccC
Confidence 9999777778899999999999999999887766553 2356788876653
No 298
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.54 E-value=1.3e-14 Score=141.55 Aligned_cols=113 Identities=28% Similarity=0.243 Sum_probs=104.8
Q ss_pred CcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhccccccceee
Q 006907 85 GFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRL 164 (626)
Q Consensus 85 ~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 164 (626)
..++.|+|++|.|++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+|+ .+|..+..+++|+.|+|
T Consensus 64 ~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L 142 (229)
T 3e6j_A 64 INLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLAL 142 (229)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEEC
T ss_pred cCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEEC
Confidence 46999999999998777778899999999999999999777777899999999999999999 89999999999999999
Q ss_pred ccccccCCchhhhhcCCCCccccCCCCCCCCCCC
Q 006907 165 NNNKLSGQIPTLVANLTSLSFLDLSFNNLSGPTP 198 (626)
Q Consensus 165 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 198 (626)
++|+|++..+..|..+++|+.|+|++|+++...+
T Consensus 143 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 143 DQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred CCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 9999997767789999999999999999998765
No 299
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.54 E-value=1.4e-14 Score=146.18 Aligned_cols=119 Identities=25% Similarity=0.265 Sum_probs=108.8
Q ss_pred CcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEeccccc-ccCCCCchhhcccccccee
Q 006907 85 GFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQ-LVGEIPSSLGFLTHLTYLR 163 (626)
Q Consensus 85 ~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~g~~p~~~~~l~~L~~L~ 163 (626)
..++.|+|++|.+++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|. ++...|..|..+++|++|+
T Consensus 32 ~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~ 111 (285)
T 1ozn_A 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (285)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEE
Confidence 368999999999998888899999999999999999998889999999999999999997 8866688999999999999
Q ss_pred eccccccCCchhhhhcCCCCccccCCCCCCCCCCCccccC
Q 006907 164 LNNNKLSGQIPTLVANLTSLSFLDLSFNNLSGPTPKVLAN 203 (626)
Q Consensus 164 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~ 203 (626)
|++|++++..|..+.++++|+.|++++|++++.++..+..
T Consensus 112 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 151 (285)
T 1ozn_A 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRD 151 (285)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred CCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhcc
Confidence 9999999888889999999999999999999888776654
No 300
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.53 E-value=5.9e-15 Score=165.02 Aligned_cols=142 Identities=15% Similarity=0.109 Sum_probs=104.1
Q ss_pred CCCCCCCCCCCCCcc----ceeeeeCC-----------------CCcEEEEEeCCCCCcccCCccccCCcccceeeeccC
Q 006907 61 HVMDGWDINSVDPCT----WNMVACSA-----------------EGFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNN 119 (626)
Q Consensus 61 ~~l~sW~~~~~~~C~----w~gv~C~~-----------------~~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N 119 (626)
..+++|.+ +.+||. |.++.|+. ...++.|++++|.+....+..|.++++|++|+|++|
T Consensus 7 ~~l~~~~~-~~~C~~~~~~~~c~~~~~~i~~~~~~~~~~~~~l~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n 85 (597)
T 3oja_B 7 YNVKPRQP-EYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDL 85 (597)
T ss_dssp ----CCCS-EECCCCC--CCSEEECSCEECSSCCCCEESCSSGGGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTS
T ss_pred ccccCCCC-CCcCcccCcCceeEecCceecccccccccCcccccCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCC
Confidence 35678975 456763 76665541 024567788888887666666778888888888888
Q ss_pred CCCCCCCcccCCccccceEecccccccCCCCchhhccccccceeeccccccCCchhhhhcCCCCccccCCCCCCCCCCCc
Q 006907 120 QLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRLNNNKLSGQIPTLVANLTSLSFLDLSFNNLSGPTPK 199 (626)
Q Consensus 120 ~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 199 (626)
.|++..|..|+++++|++|+|++|.|++..|..|+++++|++|+|++|.|++..+..|.++++|+.|+|++|.|++.+|.
T Consensus 86 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 165 (597)
T 3oja_B 86 QIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDD 165 (597)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTT
T ss_pred CCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChh
Confidence 88877777888888888888888888877777778888888888888888855555567888888888888888887777
Q ss_pred cccC
Q 006907 200 VLAN 203 (626)
Q Consensus 200 ~~~~ 203 (626)
.+.+
T Consensus 166 ~~~~ 169 (597)
T 3oja_B 166 TFQA 169 (597)
T ss_dssp TTTT
T ss_pred hhhc
Confidence 6654
No 301
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.53 E-value=1.8e-14 Score=144.42 Aligned_cols=115 Identities=30% Similarity=0.271 Sum_probs=107.7
Q ss_pred CcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhccccccceee
Q 006907 85 GFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRL 164 (626)
Q Consensus 85 ~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 164 (626)
..++.|+|++|.+++..+..|+++++|++|+|++|++++..|..|+++++|+.|+|++|++++..|..+..+++|+.|+|
T Consensus 109 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 188 (272)
T 3rfs_A 109 TNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRL 188 (272)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEEC
Confidence 47999999999999888888999999999999999999877778899999999999999999887888899999999999
Q ss_pred ccccccCCchhhhhcCCCCccccCCCCCCCCCCCc
Q 006907 165 NNNKLSGQIPTLVANLTSLSFLDLSFNNLSGPTPK 199 (626)
Q Consensus 165 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 199 (626)
++|++++..|..+.++++|+.|++++|++.+..|.
T Consensus 189 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 223 (272)
T 3rfs_A 189 YQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPG 223 (272)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred CCCcCCccCHHHHhCCcCCCEEEccCCCccccCcH
Confidence 99999988888899999999999999999998874
No 302
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.53 E-value=7.4e-15 Score=164.98 Aligned_cols=134 Identities=24% Similarity=0.310 Sum_probs=121.6
Q ss_pred CcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCC-CCCCcccCCccccceEecccccccCCCCchhhcccccccee
Q 006907 85 GFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLS-GPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLR 163 (626)
Q Consensus 85 ~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 163 (626)
..+..++++.|.+.+..+..+..+++|+.|+|++|++. +.+|..|..+++|++|+|++|+|++..|..|.++++|++|+
T Consensus 445 ~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~ 524 (635)
T 4g8a_A 445 RNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLN 524 (635)
T ss_dssp TTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred cccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEE
Confidence 35788999999999999999999999999999999754 45788999999999999999999999999999999999999
Q ss_pred eccccccCCchhhhhcCCCCccccCCCCCCCCCCCccccCC------ccccCCcccccCCC
Q 006907 164 LNNNKLSGQIPTLVANLTSLSFLDLSFNNLSGPTPKVLANG------YSFTGNSFLCTSSE 218 (626)
Q Consensus 164 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~------~~~~~n~~lc~~~~ 218 (626)
|++|+|++..|..|.++++|+.|+|++|+|++.+|..+... ..+.+|++.|.+..
T Consensus 525 Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~~ 585 (635)
T 4g8a_A 525 MSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEH 585 (635)
T ss_dssp CTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGGG
T ss_pred CCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCCc
Confidence 99999998888999999999999999999999999887643 46889999998663
No 303
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.53 E-value=4.8e-15 Score=154.55 Aligned_cols=132 Identities=24% Similarity=0.298 Sum_probs=111.4
Q ss_pred CCCccceeeeeCC------------CCcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceE
Q 006907 71 VDPCTWNMVACSA------------EGFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTL 138 (626)
Q Consensus 71 ~~~C~w~gv~C~~------------~~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 138 (626)
..+|.|.|+ |+. ...++.|+|++|++++..+..|.++++|++|+|++|++++..|..|.++++|++|
T Consensus 27 ~~~C~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (353)
T 2z80_A 27 SLSCDRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHL 105 (353)
T ss_dssp CCEECTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCCCeE-eeCCCCCcccccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEE
Confidence 477999987 642 1368999999999998777799999999999999999998778889999999999
Q ss_pred ecccccccCCCCchhhccccccceeeccccccCCchh--hhhcCCCCccccCCCCC-CCCCCCccccCC
Q 006907 139 DLSNNQLVGEIPSSLGFLTHLTYLRLNNNKLSGQIPT--LVANLTSLSFLDLSFNN-LSGPTPKVLANG 204 (626)
Q Consensus 139 ~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~--~~~~l~~L~~L~l~~N~-l~~~~p~~~~~~ 204 (626)
+|++|++++..+..|..+++|++|+|++|+++ .+|. .+.++++|+.|++++|+ +++.+|..+.+.
T Consensus 106 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l 173 (353)
T 2z80_A 106 DLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGL 173 (353)
T ss_dssp ECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTC
T ss_pred ECCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcEEECCCCccccccCHHHccCC
Confidence 99999999544455899999999999999999 4554 78899999999999994 666666666543
No 304
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.52 E-value=1.3e-14 Score=157.58 Aligned_cols=130 Identities=22% Similarity=0.222 Sum_probs=117.2
Q ss_pred cceeeeeCCC----------CcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEeccccc
Q 006907 75 TWNMVACSAE----------GFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQ 144 (626)
Q Consensus 75 ~w~gv~C~~~----------~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 144 (626)
.|..|.|+.. ..++.|+|++|+|++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|+
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 91 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCc
Confidence 3788999632 368999999999999999999999999999999999998889999999999999999999
Q ss_pred ccCCCCchhhccccccceeeccccccCCchhhhhcCCCCccccCCCCCCCCCCCccccCC
Q 006907 145 LVGEIPSSLGFLTHLTYLRLNNNKLSGQIPTLVANLTSLSFLDLSFNNLSGPTPKVLANG 204 (626)
Q Consensus 145 l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~ 204 (626)
+++..+..|.++++|++|+|++|++++..|..|.++++|+.|++++|++++..|..+.+.
T Consensus 92 l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 151 (477)
T 2id5_A 92 LKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGL 151 (477)
T ss_dssp CCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTC
T ss_pred CCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCC
Confidence 996666678999999999999999998888999999999999999999998888777653
No 305
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.51 E-value=1.1e-14 Score=163.08 Aligned_cols=131 Identities=25% Similarity=0.275 Sum_probs=89.9
Q ss_pred cEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCC-CCCcccCCccccceEecccccccCCCCchhhccccccceee
Q 006907 86 FVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSG-PIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRL 164 (626)
Q Consensus 86 ~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 164 (626)
.++.|+|++|.+.+.+|..++++++|++|+|++|++++ .+|..|+++++|+.|+|++|++++..|..|..+++|+.|+|
T Consensus 425 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 504 (606)
T 3vq2_A 425 KLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNM 504 (606)
T ss_dssp TCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEEC
Confidence 46666666666666666667777777777777777765 35666777777777777777777766777777777777777
Q ss_pred ccccccCCchhhhhcCCCCccccCCCCCCCCCCCccccCC------ccccCCcccccCC
Q 006907 165 NNNKLSGQIPTLVANLTSLSFLDLSFNNLSGPTPKVLANG------YSFTGNSFLCTSS 217 (626)
Q Consensus 165 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~------~~~~~n~~lc~~~ 217 (626)
++|++++.+|..+.++++|+.|++++|+|+. +|..+... ..+.+|++.|.+.
T Consensus 505 s~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~-~p~~~~~l~~~L~~l~l~~N~~~c~c~ 562 (606)
T 3vq2_A 505 SHNNLLFLDSSHYNQLYSLSTLDCSFNRIET-SKGILQHFPKSLAFFNLTNNSVACICE 562 (606)
T ss_dssp CSSCCSCEEGGGTTTCTTCCEEECTTSCCCC-EESCGGGSCTTCCEEECCSCCCCCSST
T ss_pred CCCcCCCcCHHHccCCCcCCEEECCCCcCcc-cCHhHhhhcccCcEEEccCCCcccCCc
Confidence 7777776667777777777777777777773 44434322 2466777776654
No 306
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.51 E-value=2.8e-14 Score=143.24 Aligned_cols=117 Identities=26% Similarity=0.310 Sum_probs=73.8
Q ss_pred CcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhccccccceee
Q 006907 85 GFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRL 164 (626)
Q Consensus 85 ~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 164 (626)
.+++.|+|++|.+++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|.+++..+..+..+++|++|+|
T Consensus 52 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 131 (276)
T 2z62_A 52 PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNV 131 (276)
T ss_dssp TTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEEC
T ss_pred cCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEEC
Confidence 34666666666666655556666666666666666666555566666666666666666666555545666666666666
Q ss_pred ccccccC-CchhhhhcCCCCccccCCCCCCCCCCCccc
Q 006907 165 NNNKLSG-QIPTLVANLTSLSFLDLSFNNLSGPTPKVL 201 (626)
Q Consensus 165 ~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~ 201 (626)
++|++++ .+|..+.++++|+.|++++|++++.++..+
T Consensus 132 ~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 169 (276)
T 2z62_A 132 AHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDL 169 (276)
T ss_dssp CSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGG
T ss_pred cCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHh
Confidence 6666664 246666666666666666666665555443
No 307
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.51 E-value=7.1e-15 Score=149.97 Aligned_cols=129 Identities=22% Similarity=0.257 Sum_probs=111.9
Q ss_pred ccceeeeeCCC----------CcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCC--CCCcccCCccccceEecc
Q 006907 74 CTWNMVACSAE----------GFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSG--PIPVEFGMLSELQTLDLS 141 (626)
Q Consensus 74 C~w~gv~C~~~----------~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~ 141 (626)
|.|.+|.|+.. ..++.|+|++|+++...+..|.++++|++|+|++|+++. .+|..+..+++|++|+|+
T Consensus 7 C~~~~l~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls 86 (306)
T 2z66_A 7 CSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS 86 (306)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECC
T ss_pred eCCCEEEcCCCCcccCCCCCCCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECC
Confidence 78999999742 379999999999996666678999999999999999983 336778889999999999
Q ss_pred cccccCCCCchhhccccccceeeccccccCCch-hhhhcCCCCccccCCCCCCCCCCCccccC
Q 006907 142 NNQLVGEIPSSLGFLTHLTYLRLNNNKLSGQIP-TLVANLTSLSFLDLSFNNLSGPTPKVLAN 203 (626)
Q Consensus 142 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~ 203 (626)
+|.++ .+|..+..+++|++|+|++|++++..+ ..+.++++|+.|++++|++++.+|..+.+
T Consensus 87 ~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 148 (306)
T 2z66_A 87 FNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNG 148 (306)
T ss_dssp SCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTT
T ss_pred CCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhccc
Confidence 99999 678889999999999999999996554 57899999999999999999888877654
No 308
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.50 E-value=1.4e-14 Score=153.22 Aligned_cols=141 Identities=16% Similarity=0.117 Sum_probs=111.3
Q ss_pred CCCCCCCCCCCcc----ceeeeeCC-----------------CCcEEEEEeCCCCCcccCCccccCCcccceeeeccCCC
Q 006907 63 MDGWDINSVDPCT----WNMVACSA-----------------EGFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQL 121 (626)
Q Consensus 63 l~sW~~~~~~~C~----w~gv~C~~-----------------~~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l 121 (626)
+++|.. +.+||. |.++.|+. ...++.|+++++.++...+..|.++++|++|+|++|++
T Consensus 3 ~~~~~~-~~~C~~~~~~~~c~~~~~~i~~~~~~~~~~~~~~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i 81 (390)
T 3o6n_A 3 VKPRQP-EYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQI 81 (390)
T ss_dssp ----CC-EECBCC------EEEESCEECSSCCCCEESCSSGGGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCC
T ss_pred cCCCCC-ccceehhhhhhccceeeeeeecccccccccccccccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcc
Confidence 567875 467774 55544431 13578899999998876666688999999999999999
Q ss_pred CCCCCcccCCccccceEecccccccCCCCchhhccccccceeeccccccCCchhhhhcCCCCccccCCCCCCCCCCCccc
Q 006907 122 SGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRLNNNKLSGQIPTLVANLTSLSFLDLSFNNLSGPTPKVL 201 (626)
Q Consensus 122 ~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~ 201 (626)
++..|..|.++++|++|+|++|.+++..|..|..+++|++|+|++|+++...+..|.++++|+.|++++|++++.+|..+
T Consensus 82 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 161 (390)
T 3o6n_A 82 EEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTF 161 (390)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTT
T ss_pred cccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhc
Confidence 97777799999999999999999998888889999999999999999995444457899999999999999998888777
Q ss_pred cCC
Q 006907 202 ANG 204 (626)
Q Consensus 202 ~~~ 204 (626)
...
T Consensus 162 ~~l 164 (390)
T 3o6n_A 162 QAT 164 (390)
T ss_dssp SSC
T ss_pred cCC
Confidence 653
No 309
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.50 E-value=1.1e-14 Score=142.96 Aligned_cols=118 Identities=19% Similarity=0.225 Sum_probs=105.1
Q ss_pred CcEEEEEeCCCCCcccCCccccCCcccceeeeccCC-CCCCCCcccCCccccceEeccc-ccccCCCCchhhccccccce
Q 006907 85 GFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQ-LSGPIPVEFGMLSELQTLDLSN-NQLVGEIPSSLGFLTHLTYL 162 (626)
Q Consensus 85 ~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~-N~l~g~~p~~~~~l~~L~~L 162 (626)
..++.|+|++|++++..+..|.++++|++|+|++|+ +++..+..|.++++|++|+|++ |++++..+..|..+++|+.|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 369999999999998888899999999999999997 8866666899999999999999 99997777889999999999
Q ss_pred eeccccccCCchhhhhcCCCCc---cccCCCC-CCCCCCCccccCC
Q 006907 163 RLNNNKLSGQIPTLVANLTSLS---FLDLSFN-NLSGPTPKVLANG 204 (626)
Q Consensus 163 ~l~~N~l~~~~p~~~~~l~~L~---~L~l~~N-~l~~~~p~~~~~~ 204 (626)
+|++|++++ +|. +..+++|+ .|++++| ++++.++..+.+.
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l 154 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGL 154 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTT
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccch
Confidence 999999995 776 88888888 9999999 9988777766543
No 310
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.50 E-value=1.7e-14 Score=159.43 Aligned_cols=109 Identities=26% Similarity=0.287 Sum_probs=102.0
Q ss_pred cEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhccccccceeec
Q 006907 86 FVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRLN 165 (626)
Q Consensus 86 ~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~ 165 (626)
.++.|+|++|.|++ +|. |+++++|+.|+|++|+|+ .+|..|+++++|+.|+|++|+|++ +| .|+.+++|+.|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 47889999999997 565 999999999999999999 899999999999999999999996 77 89999999999999
Q ss_pred cccccCCc-hhhhhcCCCCccccCCCCCCCCCCCc
Q 006907 166 NNKLSGQI-PTLVANLTSLSFLDLSFNNLSGPTPK 199 (626)
Q Consensus 166 ~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~~p~ 199 (626)
+|+|++.. |..+..+++|+.|+|++|+|++.+|.
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 551 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGI 551 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSC
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccH
Confidence 99999876 99999999999999999999988774
No 311
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.49 E-value=3.2e-14 Score=153.47 Aligned_cols=128 Identities=21% Similarity=0.227 Sum_probs=110.9
Q ss_pred ceeeeeCCC----------CcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccc
Q 006907 76 WNMVACSAE----------GFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQL 145 (626)
Q Consensus 76 w~gv~C~~~----------~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 145 (626)
|..|.|... ..++.|+|++|+|++..|..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|
T Consensus 56 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l 135 (452)
T 3zyi_A 56 FSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWL 135 (452)
T ss_dssp SCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CcEEEECCCCcCccCCCCCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcC
Confidence 678888642 3689999999999999999999999999999999999988889999999999999999999
Q ss_pred cCCCCchhhccccccceeeccccccCCchhhhhcCCCCccccCCCCCCCCCCCc-cccC
Q 006907 146 VGEIPSSLGFLTHLTYLRLNNNKLSGQIPTLVANLTSLSFLDLSFNNLSGPTPK-VLAN 203 (626)
Q Consensus 146 ~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~ 203 (626)
++..+..|..+++|++|+|++|+|++..+..|.++++|+.|++++|+..+.+|. .+.+
T Consensus 136 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~ 194 (452)
T 3zyi_A 136 TVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEG 194 (452)
T ss_dssp SBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTT
T ss_pred CccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccC
Confidence 977777799999999999999999966667899999999999999554444443 4443
No 312
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.49 E-value=3.7e-14 Score=152.43 Aligned_cols=131 Identities=25% Similarity=0.280 Sum_probs=102.4
Q ss_pred cEEEEEeCCCCCcccCCc-------------------------cccCCcccceeeeccCCCCCCCCcccCCccccceEec
Q 006907 86 FVVSLEMASMGLSGTLSP-------------------------SIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDL 140 (626)
Q Consensus 86 ~v~~l~L~~~~l~~~~~~-------------------------~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 140 (626)
.++.|+|++|.|++..+. .|.++++|++|+|++|+|+ .+| .+..+++|+.|+|
T Consensus 137 ~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~L 214 (440)
T 3zyj_A 137 KLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDL 214 (440)
T ss_dssp SCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEEC
T ss_pred cCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-ccCCCcccCEEEC
Confidence 567777777766644433 4556667777777777777 455 4777888888888
Q ss_pred ccccccCCCCchhhccccccceeeccccccCCchhhhhcCCCCccccCCCCCCCCCCCccccC-----CccccCCccccc
Q 006907 141 SNNQLVGEIPSSLGFLTHLTYLRLNNNKLSGQIPTLVANLTSLSFLDLSFNNLSGPTPKVLAN-----GYSFTGNSFLCT 215 (626)
Q Consensus 141 ~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-----~~~~~~n~~lc~ 215 (626)
++|+|++..|..|..+++|+.|+|++|++++..|..|.++++|+.|+|++|+|++.++..+.. .+.+.+|++.|.
T Consensus 215 s~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~Cd 294 (440)
T 3zyj_A 215 SGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCN 294 (440)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECS
T ss_pred CCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCC
Confidence 888888877888999999999999999999888888999999999999999999888877654 346789999998
Q ss_pred CCC
Q 006907 216 SSE 218 (626)
Q Consensus 216 ~~~ 218 (626)
+..
T Consensus 295 C~l 297 (440)
T 3zyj_A 295 CDI 297 (440)
T ss_dssp STT
T ss_pred CCc
Confidence 653
No 313
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.48 E-value=5e-14 Score=160.00 Aligned_cols=130 Identities=22% Similarity=0.242 Sum_probs=113.9
Q ss_pred ccceeeeeCC----------CCcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccc
Q 006907 74 CTWNMVACSA----------EGFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNN 143 (626)
Q Consensus 74 C~w~gv~C~~----------~~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 143 (626)
|.++.|.|+. ..+++.|+|++|++++..+..|+++++|++|+|++|++++..|..|+++++|++|+|++|
T Consensus 4 ~~~~~~~cs~~~L~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 83 (680)
T 1ziw_A 4 VSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHN 83 (680)
T ss_dssp CBSSEEECCSSCCSSCCSCSCTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSS
T ss_pred eECCeeECCCCCccccccccCCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCC
Confidence 3455577753 147999999999999988889999999999999999999988999999999999999999
Q ss_pred cccCCCCchhhccccccceeeccccccCCchhhhhcCCCCccccCCCCCCCCCCCccccC
Q 006907 144 QLVGEIPSSLGFLTHLTYLRLNNNKLSGQIPTLVANLTSLSFLDLSFNNLSGPTPKVLAN 203 (626)
Q Consensus 144 ~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~ 203 (626)
.+++..+..|.++++|++|+|++|++++..|..|.++++|++|++++|.+++.+|..+.+
T Consensus 84 ~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 143 (680)
T 1ziw_A 84 ELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQ 143 (680)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSC
T ss_pred ccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcc
Confidence 999655557999999999999999999777788999999999999999999988887654
No 314
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.48 E-value=7.4e-14 Score=141.36 Aligned_cols=113 Identities=29% Similarity=0.275 Sum_probs=60.1
Q ss_pred cEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhccccccceeec
Q 006907 86 FVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRLN 165 (626)
Q Consensus 86 ~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~ 165 (626)
.++.|+|++|.|++..+..|.++++|++|+|++|+|++ +|.. +.+++|++|+|++|+|+ .+|..+..+++|+.|+|+
T Consensus 32 ~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~-~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~ 108 (290)
T 1p9a_G 32 DTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVS 108 (290)
T ss_dssp TCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EECC-SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECC
T ss_pred CCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCc-ccCC-CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECC
Confidence 45566666666665555556666666666655555553 2221 44555555555555555 445555555555555555
Q ss_pred cccccCCchhhhhcCCCCccccCCCCCCCCCCCccc
Q 006907 166 NNKLSGQIPTLVANLTSLSFLDLSFNNLSGPTPKVL 201 (626)
Q Consensus 166 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~ 201 (626)
+|+|++..|..|.++++|+.|+|++|+|++.+|..+
T Consensus 109 ~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 144 (290)
T 1p9a_G 109 FNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLL 144 (290)
T ss_dssp SSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTT
T ss_pred CCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhc
Confidence 555554444445555555555555555554444433
No 315
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.48 E-value=4.1e-14 Score=147.07 Aligned_cols=109 Identities=24% Similarity=0.236 Sum_probs=95.5
Q ss_pred ccceeeeeCCCCcEEEEEeCCC-CCcccCCccccCCcccceeeecc-CCCCCCCCcccCCccccceEecccccccCCCCc
Q 006907 74 CTWNMVACSAEGFVVSLEMASM-GLSGTLSPSIGNLTHLRTMLLHN-NQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPS 151 (626)
Q Consensus 74 C~w~gv~C~~~~~v~~l~L~~~-~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~ 151 (626)
|.|.+|.|++ + +|++ +|. |..+++|++|+|++ |+|++..|..|++|++|+.|+|++|+|++..|.
T Consensus 8 C~~~~v~~~~-----------~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 74 (347)
T 2ifg_A 8 HGSSGLRCTR-----------DGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPD 74 (347)
T ss_dssp SSSSCEECCS-----------SCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTT
T ss_pred ccCCEEEcCC-----------CCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHH
Confidence 7887777753 4 6664 777 99999999999996 999987778999999999999999999999999
Q ss_pred hhhccccccceeeccccccCCchhhhhcCCCCccccCCCCCCCCC
Q 006907 152 SLGFLTHLTYLRLNNNKLSGQIPTLVANLTSLSFLDLSFNNLSGP 196 (626)
Q Consensus 152 ~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 196 (626)
.|.+|++|+.|+|++|+|++..+..+..++ |+.|+|++|+|...
T Consensus 75 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 75 AFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHCS 118 (347)
T ss_dssp GGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCCC
T ss_pred HhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccCC
Confidence 999999999999999999966666666665 99999999999854
No 316
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.48 E-value=3.4e-14 Score=165.34 Aligned_cols=129 Identities=24% Similarity=0.201 Sum_probs=97.2
Q ss_pred ccceeeeeCCCCcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCC-CcccCCccccceEecccccccCCCCch
Q 006907 74 CTWNMVACSAEGFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPI-PVEFGMLSELQTLDLSNNQLVGEIPSS 152 (626)
Q Consensus 74 C~w~gv~C~~~~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~g~~p~~ 152 (626)
|.|..|.+ -..+++.|+|++|.|++..|..|.++++|++|+|++|.+.+.+ |..|+++++|++|+|++|.+++..|..
T Consensus 14 ~~L~~vP~-lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~ 92 (844)
T 3j0a_A 14 CNLTQVPQ-VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDA 92 (844)
T ss_dssp CCSSCCCS-SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTS
T ss_pred CCCCCCCC-CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhH
Confidence 45777777 4567888999998888888888888888888888888666565 667788888888888888888777777
Q ss_pred hhccccccceeeccccccCCchhh--hhcCCCCccccCCCCCCCCCCC-ccccC
Q 006907 153 LGFLTHLTYLRLNNNKLSGQIPTL--VANLTSLSFLDLSFNNLSGPTP-KVLAN 203 (626)
Q Consensus 153 ~~~l~~L~~L~l~~N~l~~~~p~~--~~~l~~L~~L~l~~N~l~~~~p-~~~~~ 203 (626)
|.++++|++|+|++|.+++.+|.. +.++++|+.|+|++|.+++..| ..+++
T Consensus 93 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~ 146 (844)
T 3j0a_A 93 FQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGK 146 (844)
T ss_dssp SCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGT
T ss_pred ccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhh
Confidence 888888888888888877766554 7777777777777777777654 34443
No 317
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.47 E-value=4e-14 Score=158.53 Aligned_cols=130 Identities=20% Similarity=0.259 Sum_probs=71.5
Q ss_pred cEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCC---CCCcccCCccccceEecccccccCCCCchhhccccccce
Q 006907 86 FVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSG---PIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYL 162 (626)
Q Consensus 86 ~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~---~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L 162 (626)
.++.|+|++|.+++..|..++++++|++|+|++|++++ ..+..+..+++|++|+|++|++++..|..|..+++|+.|
T Consensus 426 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 505 (606)
T 3t6q_A 426 LLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHV 505 (606)
T ss_dssp TCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred cCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEE
Confidence 34555555555555555555555555555555555554 122345555555555555555555555555566666666
Q ss_pred eeccccccCCchhhhhcCCCCccccCCCCCCCCCCCccccC-----CccccCCcccccC
Q 006907 163 RLNNNKLSGQIPTLVANLTSLSFLDLSFNNLSGPTPKVLAN-----GYSFTGNSFLCTS 216 (626)
Q Consensus 163 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-----~~~~~~n~~lc~~ 216 (626)
+|++|++++..|..+.++++| .|++++|++++.+|..+.. ...+.+|++.|.+
T Consensus 506 ~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 563 (606)
T 3t6q_A 506 DLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTC 563 (606)
T ss_dssp ECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSG
T ss_pred ECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccC
Confidence 666666665555566666666 6666666666555554432 2345566666543
No 318
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.47 E-value=5.6e-14 Score=157.37 Aligned_cols=125 Identities=22% Similarity=0.116 Sum_probs=113.8
Q ss_pred ceeeeeCCC----------CcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccc
Q 006907 76 WNMVACSAE----------GFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQL 145 (626)
Q Consensus 76 w~gv~C~~~----------~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 145 (626)
+..|.|... ..++.|+|++|.|++..|..|+++++|++|+|++|++++..|..|+++++|++|+|++|++
T Consensus 14 ~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 93 (606)
T 3t6q_A 14 NKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPL 93 (606)
T ss_dssp TTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred CceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcc
Confidence 456889642 3699999999999999999999999999999999999988899999999999999999999
Q ss_pred cCCCCchhhccccccceeeccccccCCchhhhhcCCCCccccCCCCCCCCCC-Ccc
Q 006907 146 VGEIPSSLGFLTHLTYLRLNNNKLSGQIPTLVANLTSLSFLDLSFNNLSGPT-PKV 200 (626)
Q Consensus 146 ~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~-p~~ 200 (626)
++..|..|+.+++|++|+|++|++++..|..+.++++|++|++++|++++.. |..
T Consensus 94 ~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 149 (606)
T 3t6q_A 94 IFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKG 149 (606)
T ss_dssp SEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTT
T ss_pred cccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccc
Confidence 9999999999999999999999999766888999999999999999999854 443
No 319
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.47 E-value=9.2e-14 Score=143.48 Aligned_cols=127 Identities=28% Similarity=0.422 Sum_probs=112.8
Q ss_pred ccceeeeeCCC----------CcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccc
Q 006907 74 CTWNMVACSAE----------GFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNN 143 (626)
Q Consensus 74 C~w~gv~C~~~----------~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 143 (626)
|.|+.+.|+.. ..++.|+|++|.+++..|..|.++++|++|+|++|++++..|..|+++++|++|+|++|
T Consensus 33 c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 112 (332)
T 2ft3_A 33 CHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKN 112 (332)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSS
T ss_pred ccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCC
Confidence 78999999742 36899999999999888889999999999999999999888999999999999999999
Q ss_pred cccCCCCchhhccccccceeeccccccCCchhhhhcCCCCccccCCCCCCC--CCCCccccC
Q 006907 144 QLVGEIPSSLGFLTHLTYLRLNNNKLSGQIPTLVANLTSLSFLDLSFNNLS--GPTPKVLAN 203 (626)
Q Consensus 144 ~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~--~~~p~~~~~ 203 (626)
+++ .+|..+. ++|++|++++|++++..+..+.++++|+.|++++|+++ +..|..+..
T Consensus 113 ~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~ 171 (332)
T 2ft3_A 113 HLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDG 171 (332)
T ss_dssp CCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCS
T ss_pred cCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccC
Confidence 999 7777765 89999999999999766678999999999999999996 366665553
No 320
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.46 E-value=7e-14 Score=150.83 Aligned_cols=132 Identities=22% Similarity=0.245 Sum_probs=103.6
Q ss_pred CcEEEEEeCCCCCcccCCc-------------------------cccCCcccceeeeccCCCCCCCCcccCCccccceEe
Q 006907 85 GFVVSLEMASMGLSGTLSP-------------------------SIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLD 139 (626)
Q Consensus 85 ~~v~~l~L~~~~l~~~~~~-------------------------~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 139 (626)
..++.|+|++|.|++..+. .|.++++|++|+|++|++++ +| .+..+++|+.|+
T Consensus 147 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~ 224 (452)
T 3zyi_A 147 SKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MP-NLTPLVGLEELE 224 (452)
T ss_dssp TTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CC-CCTTCTTCCEEE
T ss_pred CCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-cc-cccccccccEEE
Confidence 3678888888877754443 35566677777777777773 44 477788888888
Q ss_pred cccccccCCCCchhhccccccceeeccccccCCchhhhhcCCCCccccCCCCCCCCCCCccccC-----CccccCCcccc
Q 006907 140 LSNNQLVGEIPSSLGFLTHLTYLRLNNNKLSGQIPTLVANLTSLSFLDLSFNNLSGPTPKVLAN-----GYSFTGNSFLC 214 (626)
Q Consensus 140 L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-----~~~~~~n~~lc 214 (626)
|++|+|++..|..|.++++|+.|+|++|++++..|..|.++++|+.|+|++|+|++.++..+.. .+.+.+|++.|
T Consensus 225 Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 225 MSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNC 304 (452)
T ss_dssp CTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEEC
T ss_pred CcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCC
Confidence 8888888888888999999999999999999888888999999999999999999888776654 34678999998
Q ss_pred cCCC
Q 006907 215 TSSE 218 (626)
Q Consensus 215 ~~~~ 218 (626)
.+..
T Consensus 305 dC~~ 308 (452)
T 3zyi_A 305 DCDI 308 (452)
T ss_dssp STTT
T ss_pred CCCc
Confidence 8653
No 321
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.46 E-value=2.7e-14 Score=166.16 Aligned_cols=132 Identities=28% Similarity=0.309 Sum_probs=108.6
Q ss_pred CcEEEEEeCCCCCcccCCc-cccCCcccceeeeccCCCC-----CCCCcccCCccccceEecccccccCCCCchhhcccc
Q 006907 85 GFVVSLEMASMGLSGTLSP-SIGNLTHLRTMLLHNNQLS-----GPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTH 158 (626)
Q Consensus 85 ~~v~~l~L~~~~l~~~~~~-~~~~l~~L~~L~L~~N~l~-----~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~ 158 (626)
.+++.|+|++|.+++..+. .+..+++|++|+|++|.++ +..|..|.++++|+.|+|++|+|++..|..|..+++
T Consensus 426 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 505 (844)
T 3j0a_A 426 PHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTA 505 (844)
T ss_dssp TTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCS
T ss_pred CccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhh
Confidence 4577888888888765443 4566788888888888887 445567889999999999999999888888999999
Q ss_pred ccceeeccccccCCchhhhhcCCCCccccCCCCCCCCCCCccccCC--ccccCCcccccCCC
Q 006907 159 LTYLRLNNNKLSGQIPTLVANLTSLSFLDLSFNNLSGPTPKVLANG--YSFTGNSFLCTSSE 218 (626)
Q Consensus 159 L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~--~~~~~n~~lc~~~~ 218 (626)
|+.|+|++|+|++..|..+. ++|+.|+|++|+|++.+|..+.+. ..+.+|++.|.+..
T Consensus 506 L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~~L~~l~l~~Np~~C~c~~ 565 (844)
T 3j0a_A 506 LRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVFVSLSVLDITHNKFICECEL 565 (844)
T ss_dssp CSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCCSSCCEEEEEEECCCCSSSC
T ss_pred hheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHhCCcCEEEecCCCccccccc
Confidence 99999999999976666655 899999999999999999887653 46889999997653
No 322
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.46 E-value=2e-14 Score=161.92 Aligned_cols=137 Identities=17% Similarity=0.284 Sum_probs=119.5
Q ss_pred ccceeeeeC--CCCcEEEEEeCCCCCccc-----------------CCcccc--CCcccceeeeccCCCCCCCCcccCCc
Q 006907 74 CTWNMVACS--AEGFVVSLEMASMGLSGT-----------------LSPSIG--NLTHLRTMLLHNNQLSGPIPVEFGML 132 (626)
Q Consensus 74 C~w~gv~C~--~~~~v~~l~L~~~~l~~~-----------------~~~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l 132 (626)
+...|+.=. .-.+++.|+|++|.++|. +|..++ ++++|++|+|++|++.|.+|..|+++
T Consensus 193 n~l~~ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l 272 (636)
T 4eco_A 193 NNITFVSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKAL 272 (636)
T ss_dssp CEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTC
T ss_pred CCCccCCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcC
Confidence 345554321 235799999999999996 999999 99999999999999999999999999
Q ss_pred cccceEeccccc-ccC-CCCchhhcc------ccccceeeccccccCCchh--hhhcCCCCccccCCCCCCCCCCCcccc
Q 006907 133 SELQTLDLSNNQ-LVG-EIPSSLGFL------THLTYLRLNNNKLSGQIPT--LVANLTSLSFLDLSFNNLSGPTPKVLA 202 (626)
Q Consensus 133 ~~L~~L~L~~N~-l~g-~~p~~~~~l------~~L~~L~l~~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~p~~~~ 202 (626)
++|++|+|++|+ ++| .+|..++.+ ++|++|+|++|+++ .+|. .+.++++|+.|++++|+++|.+| .+.
T Consensus 273 ~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~ 350 (636)
T 4eco_A 273 PEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFG 350 (636)
T ss_dssp SSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCE
T ss_pred CCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhC
Confidence 999999999998 999 899999887 99999999999999 8998 99999999999999999999999 665
Q ss_pred CC-----ccccCCcc
Q 006907 203 NG-----YSFTGNSF 212 (626)
Q Consensus 203 ~~-----~~~~~n~~ 212 (626)
+. ..+.+|..
T Consensus 351 ~l~~L~~L~L~~N~l 365 (636)
T 4eco_A 351 SEIKLASLNLAYNQI 365 (636)
T ss_dssp EEEEESEEECCSSEE
T ss_pred CCCCCCEEECCCCcc
Confidence 42 34555554
No 323
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.46 E-value=5.5e-14 Score=147.01 Aligned_cols=133 Identities=26% Similarity=0.251 Sum_probs=116.1
Q ss_pred CcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhccccccceee
Q 006907 85 GFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRL 164 (626)
Q Consensus 85 ~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 164 (626)
.+++.|+|++|.|++..+..|.++++|++|+|++|+|++..+..|.++++|+.|+|++|+|++..|..|..+++|+.|+|
T Consensus 64 ~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L 143 (361)
T 2xot_A 64 TNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYL 143 (361)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred cccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEEC
Confidence 57999999999999988899999999999999999999777778999999999999999999888999999999999999
Q ss_pred ccccccCCchhhh---hcCCCCccccCCCCCCCCCCCccccC-------CccccCCcccccCC
Q 006907 165 NNNKLSGQIPTLV---ANLTSLSFLDLSFNNLSGPTPKVLAN-------GYSFTGNSFLCTSS 217 (626)
Q Consensus 165 ~~N~l~~~~p~~~---~~l~~L~~L~l~~N~l~~~~p~~~~~-------~~~~~~n~~lc~~~ 217 (626)
++|+|++..+..| ..+++|+.|+|++|+|++.++..+.. .+.+.+|++.|.+.
T Consensus 144 ~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~C~ 206 (361)
T 2xot_A 144 SQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECDCK 206 (361)
T ss_dssp CSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEECCHH
T ss_pred CCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccCCcC
Confidence 9999995444444 67999999999999999877655442 35789999998754
No 324
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.46 E-value=1.3e-13 Score=142.16 Aligned_cols=128 Identities=26% Similarity=0.384 Sum_probs=113.0
Q ss_pred CccceeeeeCCC----------CcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEeccc
Q 006907 73 PCTWNMVACSAE----------GFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSN 142 (626)
Q Consensus 73 ~C~w~gv~C~~~----------~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 142 (626)
.|.|+.+.|+.. ..++.|+|++|++++..+..|+++++|++|+|++|++++..|..|+++++|++|+|++
T Consensus 30 ~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 109 (330)
T 1xku_A 30 QCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSK 109 (330)
T ss_dssp EEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred cCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCC
Confidence 368999999732 3689999999999988888999999999999999999988899999999999999999
Q ss_pred ccccCCCCchhhccccccceeeccccccCCchhhhhcCCCCccccCCCCCCCC--CCCccccC
Q 006907 143 NQLVGEIPSSLGFLTHLTYLRLNNNKLSGQIPTLVANLTSLSFLDLSFNNLSG--PTPKVLAN 203 (626)
Q Consensus 143 N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~--~~p~~~~~ 203 (626)
|+++ .+|..+. ++|++|++++|++++..+..+.++++|+.|++++|+++. ..|..+.+
T Consensus 110 n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~ 169 (330)
T 1xku_A 110 NQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQG 169 (330)
T ss_dssp SCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGG
T ss_pred CcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccC
Confidence 9999 7777665 799999999999998888889999999999999999964 55655544
No 325
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.45 E-value=8.1e-14 Score=128.85 Aligned_cols=111 Identities=23% Similarity=0.238 Sum_probs=99.3
Q ss_pred CcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCC-Cchhhcccccccee
Q 006907 85 GFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEI-PSSLGFLTHLTYLR 163 (626)
Q Consensus 85 ~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~-p~~~~~l~~L~~L~ 163 (626)
..++.|+|++|.|++. ..+..+++|++|+|++|++++.+|..+.++++|++|+|++|++++.. +..+..+++|+.|+
T Consensus 49 ~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~ 126 (168)
T 2ell_A 49 VNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLD 126 (168)
T ss_dssp GGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCCSSGGGGGGSSCSCCCEEE
T ss_pred CCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEeccCCccCcchhHHHHhcCCCCCEEE
Confidence 4699999999999977 78999999999999999999888988888999999999999999532 27899999999999
Q ss_pred eccccccCCch---hhhhcCCCCccccCCCCCCCCCC
Q 006907 164 LNNNKLSGQIP---TLVANLTSLSFLDLSFNNLSGPT 197 (626)
Q Consensus 164 l~~N~l~~~~p---~~~~~l~~L~~L~l~~N~l~~~~ 197 (626)
|++|.+++..+ ..+..+++|+.|++++|.+...+
T Consensus 127 l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~ 163 (168)
T 2ell_A 127 LFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEAP 163 (168)
T ss_dssp CCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCBCC
T ss_pred eeCCcCcchHHHHHHHHHhCccCcEecCCCCChhhcc
Confidence 99999996555 48999999999999999987543
No 326
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.45 E-value=1.4e-13 Score=127.59 Aligned_cols=101 Identities=27% Similarity=0.274 Sum_probs=91.3
Q ss_pred ccceeeeeCCC----------CcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccc
Q 006907 74 CTWNMVACSAE----------GFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNN 143 (626)
Q Consensus 74 C~w~gv~C~~~----------~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 143 (626)
|.|+.|.|+.. ..++.|+|++|.|++..|..|.++++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 9 C~~~~l~~s~n~l~~ip~~~~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 9 CSGTTVDCSGKSLASVPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cCCCEEEeCCCCcCccCccCCCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 78999999742 36899999999999999999999999999999999999777777899999999999999
Q ss_pred cccCCCCchhhccccccceeeccccccCCch
Q 006907 144 QLVGEIPSSLGFLTHLTYLRLNNNKLSGQIP 174 (626)
Q Consensus 144 ~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p 174 (626)
+|++..|..|..+++|+.|+|++|.++...+
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 9997777789999999999999999986543
No 327
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.45 E-value=5.9e-14 Score=155.83 Aligned_cols=132 Identities=20% Similarity=0.270 Sum_probs=95.3
Q ss_pred cEEEEEeCCCCCcccCC-ccccCCcccceeeeccCCCCCCCCcccCCccccceEeccccccc-CCCCchhhcccccccee
Q 006907 86 FVVSLEMASMGLSGTLS-PSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLV-GEIPSSLGFLTHLTYLR 163 (626)
Q Consensus 86 ~v~~l~L~~~~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-g~~p~~~~~l~~L~~L~ 163 (626)
.++.|+|++|.+.+..| ..+.++++|++|+|++|++.+.+|..|.++++|+.|+|++|.++ +.+|..+..+++|+.|+
T Consensus 397 ~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~ 476 (570)
T 2z63_A 397 QLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLD 476 (570)
T ss_dssp TCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEE
T ss_pred CCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEE
Confidence 45556666666665544 45677777777777777777777777777777888888888776 56777777788888888
Q ss_pred eccccccCCchhhhhcCCCCccccCCCCCCCCCCCccccCC-----ccccCCcccccCC
Q 006907 164 LNNNKLSGQIPTLVANLTSLSFLDLSFNNLSGPTPKVLANG-----YSFTGNSFLCTSS 217 (626)
Q Consensus 164 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~-----~~~~~n~~lc~~~ 217 (626)
|++|++++..|..+.++++|+.|++++|++++.+|..+.+. ..+.+|++.|.++
T Consensus 477 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 535 (570)
T 2z63_A 477 LSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 535 (570)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCc
Confidence 88888887667777788888888888888887777666542 3466777776654
No 328
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.43 E-value=2.2e-13 Score=151.21 Aligned_cols=118 Identities=19% Similarity=0.169 Sum_probs=94.4
Q ss_pred cEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhccccccceeec
Q 006907 86 FVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRLN 165 (626)
Q Consensus 86 ~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~ 165 (626)
+++.|+|++|.+++..+..|.++++|++|+|++|++++..|..|+++++|++|+|++|++++..|..|..+++|++|+|+
T Consensus 29 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 108 (570)
T 2z63_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (570)
T ss_dssp SCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred cccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccccc
Confidence 57888888888888777788888888888888888887667778888888888888888887777788888888888888
Q ss_pred cccccCCchhhhhcCCCCccccCCCCCCCC-CCCccccC
Q 006907 166 NNKLSGQIPTLVANLTSLSFLDLSFNNLSG-PTPKVLAN 203 (626)
Q Consensus 166 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~p~~~~~ 203 (626)
+|++++..+..++++++|++|++++|.+++ .+|..+++
T Consensus 109 ~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~ 147 (570)
T 2z63_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSN 147 (570)
T ss_dssp TSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGG
T ss_pred ccccccCCCccccccccccEEecCCCccceecChhhhcc
Confidence 888885444467888888888888888877 46776654
No 329
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.42 E-value=2.2e-13 Score=152.31 Aligned_cols=119 Identities=20% Similarity=0.162 Sum_probs=109.2
Q ss_pred CcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhccccccceee
Q 006907 85 GFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRL 164 (626)
Q Consensus 85 ~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 164 (626)
..++.|+|++|.|++..|..|+++++|++|+|++|.|++..|..|+++++|++|+|++|.|++..+..|+++++|+.|+|
T Consensus 75 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 154 (597)
T 3oja_B 75 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 154 (597)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEe
Confidence 46999999999999999999999999999999999999988888999999999999999999655566799999999999
Q ss_pred ccccccCCchhhhhcCCCCccccCCCCCCCCCCCccccC
Q 006907 165 NNNKLSGQIPTLVANLTSLSFLDLSFNNLSGPTPKVLAN 203 (626)
Q Consensus 165 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~ 203 (626)
++|.+++..|..|.++++|+.|+|++|.+++..+..+.+
T Consensus 155 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~ 193 (597)
T 3oja_B 155 SNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPS 193 (597)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGCTT
T ss_pred eCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChhhhhh
Confidence 999999988889999999999999999999876665554
No 330
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.42 E-value=1.8e-13 Score=147.17 Aligned_cols=128 Identities=22% Similarity=0.223 Sum_probs=109.6
Q ss_pred ceeeeeCCC----------CcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccc
Q 006907 76 WNMVACSAE----------GFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQL 145 (626)
Q Consensus 76 w~gv~C~~~----------~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 145 (626)
|..|.|... ..++.|+|++|+|++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|
T Consensus 45 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l 124 (440)
T 3zyj_A 45 FSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRL 124 (440)
T ss_dssp SCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCC
T ss_pred CCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcC
Confidence 678889642 3588999999999999999999999999999999999987788999999999999999999
Q ss_pred cCCCCchhhccccccceeeccccccCCchhhhhcCCCCccccCCCCCCCCCCCc-cccC
Q 006907 146 VGEIPSSLGFLTHLTYLRLNNNKLSGQIPTLVANLTSLSFLDLSFNNLSGPTPK-VLAN 203 (626)
Q Consensus 146 ~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~ 203 (626)
++..+..|..+++|++|+|++|++++..+..|.++++|+.|+|++|+..+.+|. .+.+
T Consensus 125 ~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~ 183 (440)
T 3zyj_A 125 TTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEG 183 (440)
T ss_dssp SSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTT
T ss_pred CeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhc
Confidence 976667899999999999999999976667899999999999999554444443 4443
No 331
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.42 E-value=1.7e-13 Score=155.60 Aligned_cols=132 Identities=23% Similarity=0.258 Sum_probs=95.3
Q ss_pred cEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCC----C----cccCCccccceEecccccccCCCCchhhccc
Q 006907 86 FVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPI----P----VEFGMLSELQTLDLSNNQLVGEIPSSLGFLT 157 (626)
Q Consensus 86 ~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~----p----~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~ 157 (626)
.++.|+|++|.|++..+..|.++++|++|+|++|++++.. | ..|.++++|+.|+|++|+++...+..|..++
T Consensus 481 ~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~ 560 (680)
T 1ziw_A 481 NLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLF 560 (680)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred CCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHccccc
Confidence 5677777777777666666777777777777777776431 1 2367777777888888877733334578888
Q ss_pred cccceeeccccccCCchhhhhcCCCCccccCCCCCCCCCCCcccc----C--CccccCCcccccCC
Q 006907 158 HLTYLRLNNNKLSGQIPTLVANLTSLSFLDLSFNNLSGPTPKVLA----N--GYSFTGNSFLCTSS 217 (626)
Q Consensus 158 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~----~--~~~~~~n~~lc~~~ 217 (626)
+|+.|+|++|++++..+..|.++++|+.|+|++|+|++.+|..+. + ...+.+|++.|.+.
T Consensus 561 ~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 561 ELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCE 626 (680)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCC
T ss_pred CcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCc
Confidence 888888888888865566677888888888888888887776543 1 34678999988865
No 332
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.42 E-value=1.4e-13 Score=130.95 Aligned_cols=110 Identities=16% Similarity=0.229 Sum_probs=98.2
Q ss_pred CcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhccccccceee
Q 006907 85 GFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRL 164 (626)
Q Consensus 85 ~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 164 (626)
..++.|+|++|.++ .++.+..+++|++|+|++|++++..|..|+++++|++|+|++|++++..|..+..+++|+.|+|
T Consensus 66 ~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L 143 (197)
T 4ezg_A 66 HNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDL 143 (197)
T ss_dssp TTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEEC
T ss_pred CCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEc
Confidence 46999999999665 3458899999999999999999888999999999999999999999888999999999999999
Q ss_pred ccccccCCchhhhhcCCCCccccCCCCCCCCCC
Q 006907 165 NNNKLSGQIPTLVANLTSLSFLDLSFNNLSGPT 197 (626)
Q Consensus 165 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 197 (626)
++|++.+.+| .+..+++|+.|++++|++++..
T Consensus 144 ~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~~~ 175 (197)
T 4ezg_A 144 SYNGAITDIM-PLKTLPELKSLNIQFDGVHDYR 175 (197)
T ss_dssp CSCTBCCCCG-GGGGCSSCCEEECTTBCCCCCT
T ss_pred cCCCCccccH-hhcCCCCCCEEECCCCCCcChH
Confidence 9998333677 6899999999999999999743
No 333
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.41 E-value=2.4e-13 Score=126.79 Aligned_cols=107 Identities=22% Similarity=0.266 Sum_probs=92.8
Q ss_pred cEEEEEeCCCCCcccCCccccCCc-ccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhccccccceee
Q 006907 86 FVVSLEMASMGLSGTLSPSIGNLT-HLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRL 164 (626)
Q Consensus 86 ~v~~l~L~~~~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 164 (626)
.++.|+|++|+++. +|. +..+. +|++|+|++|+|++. ..|+++++|++|+|++|+|++..|..+..+++|+.|+|
T Consensus 20 ~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 95 (176)
T 1a9n_A 20 RDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELIL 95 (176)
T ss_dssp SCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEEC
T ss_pred CceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEEC
Confidence 58999999999995 454 55555 999999999999964 68999999999999999999655566699999999999
Q ss_pred ccccccCCchh--hhhcCCCCccccCCCCCCCCCC
Q 006907 165 NNNKLSGQIPT--LVANLTSLSFLDLSFNNLSGPT 197 (626)
Q Consensus 165 ~~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~ 197 (626)
++|+|+ .+|. .+..+++|+.|++++|+++..+
T Consensus 96 ~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~~~ 129 (176)
T 1a9n_A 96 TNNSLV-ELGDLDPLASLKSLTYLCILRNPVTNKK 129 (176)
T ss_dssp CSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGGST
T ss_pred CCCcCC-cchhhHhhhcCCCCCEEEecCCCCCCcH
Confidence 999997 6776 8999999999999999998543
No 334
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.41 E-value=1.1e-13 Score=159.53 Aligned_cols=127 Identities=17% Similarity=0.220 Sum_probs=113.0
Q ss_pred ccceeeeeC--CCCcEEEEEeCCCCCcc-----------------cCCcccc--CCcccceeeeccCCCCCCCCcccCCc
Q 006907 74 CTWNMVACS--AEGFVVSLEMASMGLSG-----------------TLSPSIG--NLTHLRTMLLHNNQLSGPIPVEFGML 132 (626)
Q Consensus 74 C~w~gv~C~--~~~~v~~l~L~~~~l~~-----------------~~~~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l 132 (626)
+...|+.-. .-..++.|+|++|.|+| .+|+.++ +|++|++|+|++|++.+.+|..|+++
T Consensus 435 N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L 514 (876)
T 4ecn_A 435 NRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDL 514 (876)
T ss_dssp CEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGC
T ss_pred CcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCC
Confidence 345555422 23579999999999999 4999988 99999999999999999999999999
Q ss_pred cccceEeccccc-ccC-CCCchhhccc-------cccceeeccccccCCchh--hhhcCCCCccccCCCCCCCCCCCccc
Q 006907 133 SELQTLDLSNNQ-LVG-EIPSSLGFLT-------HLTYLRLNNNKLSGQIPT--LVANLTSLSFLDLSFNNLSGPTPKVL 201 (626)
Q Consensus 133 ~~L~~L~L~~N~-l~g-~~p~~~~~l~-------~L~~L~l~~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~p~~~ 201 (626)
++|+.|+|++|+ ++| .+|..++.++ +|+.|+|++|+++ .+|. .+.++++|+.|+|++|+++ .+| .+
T Consensus 515 ~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~ 591 (876)
T 4ecn_A 515 PELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AF 591 (876)
T ss_dssp SSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CC
T ss_pred CCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hh
Confidence 999999999998 998 8999998887 9999999999999 8998 9999999999999999999 777 56
Q ss_pred cC
Q 006907 202 AN 203 (626)
Q Consensus 202 ~~ 203 (626)
.+
T Consensus 592 ~~ 593 (876)
T 4ecn_A 592 GT 593 (876)
T ss_dssp CT
T ss_pred cC
Confidence 54
No 335
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.41 E-value=1e-13 Score=125.36 Aligned_cols=104 Identities=24% Similarity=0.277 Sum_probs=94.5
Q ss_pred CcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCC-CCchhhcccccccee
Q 006907 85 GFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGE-IPSSLGFLTHLTYLR 163 (626)
Q Consensus 85 ~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~-~p~~~~~l~~L~~L~ 163 (626)
.+++.|+|++|.+++. ..++++++|++|+|++|++++.+|..+.++++|++|+|++|.+++. .|..+..+++|+.|+
T Consensus 42 ~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~ 119 (149)
T 2je0_A 42 EELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLD 119 (149)
T ss_dssp TTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCEEE
T ss_pred CCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCEEe
Confidence 5799999999999977 7899999999999999999988998888999999999999999963 348899999999999
Q ss_pred eccccccCCch---hhhhcCCCCccccCCC
Q 006907 164 LNNNKLSGQIP---TLVANLTSLSFLDLSF 190 (626)
Q Consensus 164 l~~N~l~~~~p---~~~~~l~~L~~L~l~~ 190 (626)
+++|.+++..+ ..+..+++|+.|++++
T Consensus 120 l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 120 LFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp CTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 99999997655 5799999999999874
No 336
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.41 E-value=1.7e-13 Score=148.78 Aligned_cols=119 Identities=28% Similarity=0.243 Sum_probs=106.4
Q ss_pred CcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhccccccceee
Q 006907 85 GFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRL 164 (626)
Q Consensus 85 ~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 164 (626)
.+++.|+|++|.+++..|..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..|..|..+++|+.|+|
T Consensus 56 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l 135 (477)
T 2id5_A 56 PHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEV 135 (477)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEE
T ss_pred CCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEEC
Confidence 46999999999999988999999999999999999999665667899999999999999999888889999999999999
Q ss_pred ccccccCCchhhhhcCCCCccccCCCCCCCCCCCccccC
Q 006907 165 NNNKLSGQIPTLVANLTSLSFLDLSFNNLSGPTPKVLAN 203 (626)
Q Consensus 165 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~ 203 (626)
++|++++..|..|.++++|+.|+|++|++++.++..+.+
T Consensus 136 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~ 174 (477)
T 2id5_A 136 GDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSH 174 (477)
T ss_dssp CCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTT
T ss_pred CCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcc
Confidence 999999888888999999999999999999877665554
No 337
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.40 E-value=3.3e-13 Score=128.34 Aligned_cols=110 Identities=19% Similarity=0.270 Sum_probs=98.7
Q ss_pred CcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhccccccceee
Q 006907 85 GFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRL 164 (626)
Q Consensus 85 ~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 164 (626)
.+++.|+|++|.++ .+| .+..+++|++|+|++|.++ .+..+.++++|++|+|++|++++..|..+..+++|+.|+|
T Consensus 44 ~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L 119 (197)
T 4ezg_A 44 NSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDI 119 (197)
T ss_dssp HTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEEC
T ss_pred CCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEe
Confidence 35899999999998 556 6999999999999999876 3458999999999999999999888999999999999999
Q ss_pred ccccccCCchhhhhcCCCCccccCCCCCCCCCCC
Q 006907 165 NNNKLSGQIPTLVANLTSLSFLDLSFNNLSGPTP 198 (626)
Q Consensus 165 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 198 (626)
++|++++..|..+..+++|+.|++++|++.+.+|
T Consensus 120 s~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~ 153 (197)
T 4ezg_A 120 SHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM 153 (197)
T ss_dssp CSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG
T ss_pred cCCccCcHhHHHHhhCCCCCEEEccCCCCccccH
Confidence 9999998889999999999999999999444455
No 338
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.40 E-value=1.8e-13 Score=140.34 Aligned_cols=133 Identities=20% Similarity=0.235 Sum_probs=87.9
Q ss_pred eeeCCCCcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccC-CccccceEecccccccCCCCchhhccc
Q 006907 79 VACSAEGFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFG-MLSELQTLDLSNNQLVGEIPSSLGFLT 157 (626)
Q Consensus 79 v~C~~~~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~g~~p~~~~~l~ 157 (626)
+.+.....++.|+|++|.+++..+..++.+++|++|+|++|++++..|..+. .+++|++|+|++|.+++. |. ...++
T Consensus 114 ~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~ 191 (317)
T 3o53_A 114 VSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFA 191 (317)
T ss_dssp EEECCCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCT
T ss_pred cCccccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-cc-ccccc
Confidence 3333334567777777777776666777777777777777777766666653 677777777777777743 32 23477
Q ss_pred cccceeeccccccCCchhhhhcCCCCccccCCCCCCCCCCCccccC-----CccccCCccccc
Q 006907 158 HLTYLRLNNNKLSGQIPTLVANLTSLSFLDLSFNNLSGPTPKVLAN-----GYSFTGNSFLCT 215 (626)
Q Consensus 158 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-----~~~~~~n~~lc~ 215 (626)
+|+.|+|++|++++ +|..+..+++|+.|+|++|+|++ +|..+.. ...+.+|++.|.
T Consensus 192 ~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~~-l~~~~~~l~~L~~L~l~~N~~~~~ 252 (317)
T 3o53_A 192 KLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCG 252 (317)
T ss_dssp TCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCCBHH
T ss_pred cCCEEECCCCcCCc-chhhhcccCcccEEECcCCcccc-hhhHhhcCCCCCEEEccCCCccCc
Confidence 77778888887773 45557777788888888887774 4444433 234556666543
No 339
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.40 E-value=2.9e-13 Score=150.21 Aligned_cols=131 Identities=24% Similarity=0.328 Sum_probs=78.0
Q ss_pred CcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCC--CCCcccCCccccceEecccccccCCCCch-hhccccccc
Q 006907 85 GFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSG--PIPVEFGMLSELQTLDLSNNQLVGEIPSS-LGFLTHLTY 161 (626)
Q Consensus 85 ~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~g~~p~~-~~~l~~L~~ 161 (626)
..++.|+|++|.+++.+|..++++++|++|+|++|++++ .+|..|.++++|++|+|++|++++.+|.. +..+++|+.
T Consensus 353 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~ 432 (562)
T 3a79_B 353 SSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILV 432 (562)
T ss_dssp CCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCE
T ss_pred CCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCE
Confidence 457777777777777777777777777777777777775 23455677777777777777777645543 444444444
Q ss_pred eeeccccccC---------------------CchhhhhcCCCCccccCCCCCCCCCCCccccC-----CccccCCccccc
Q 006907 162 LRLNNNKLSG---------------------QIPTLVANLTSLSFLDLSFNNLSGPTPKVLAN-----GYSFTGNSFLCT 215 (626)
Q Consensus 162 L~l~~N~l~~---------------------~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-----~~~~~~n~~lc~ 215 (626)
|+|++|++++ .+|..+..+++|+.|+|++|+|++.++..+.. ...+.+|++.|.
T Consensus 433 L~l~~n~l~~~~~~~l~~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~ 512 (562)
T 3a79_B 433 LNLSSNMLTGSVFRCLPPKVKVLDLHNNRIMSIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT 512 (562)
T ss_dssp EECCSSCCCGGGGSSCCTTCSEEECCSSCCCCCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCCC
T ss_pred EECCCCCCCcchhhhhcCcCCEEECCCCcCcccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCCC
Confidence 4444444443 44444445556666666666665433322332 123455555554
No 340
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.39 E-value=1.4e-13 Score=140.93 Aligned_cols=108 Identities=17% Similarity=0.247 Sum_probs=70.6
Q ss_pred cEEEEEeCCCCCcccCCccc--cCCcccceeeeccCCCCCCCCcccCCc-----cccceEecccccccCCCCchhhcccc
Q 006907 86 FVVSLEMASMGLSGTLSPSI--GNLTHLRTMLLHNNQLSGPIPVEFGML-----SELQTLDLSNNQLVGEIPSSLGFLTH 158 (626)
Q Consensus 86 ~v~~l~L~~~~l~~~~~~~~--~~l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~g~~p~~~~~l~~ 158 (626)
+++.|+|++|.+++.+|..+ +.+++|++|+|++|++++. |..++.+ ++|++|+|++|++++..|..|+.+++
T Consensus 96 ~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~ 174 (312)
T 1wwl_A 96 GLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPA 174 (312)
T ss_dssp CCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSS
T ss_pred CccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCC
Confidence 46667777777766666655 6667777777777777654 6666665 66777777777776666566666677
Q ss_pred ccceeeccccccCC--chhhh--hcCCCCccccCCCCCCC
Q 006907 159 LTYLRLNNNKLSGQ--IPTLV--ANLTSLSFLDLSFNNLS 194 (626)
Q Consensus 159 L~~L~l~~N~l~~~--~p~~~--~~l~~L~~L~l~~N~l~ 194 (626)
|++|+|++|++.|. +|..+ .++++|+.|+|++|+|+
T Consensus 175 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~ 214 (312)
T 1wwl_A 175 LSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGME 214 (312)
T ss_dssp CCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCC
T ss_pred CCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCc
Confidence 77777777766654 23333 56666666666666666
No 341
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.39 E-value=5.6e-13 Score=140.80 Aligned_cols=119 Identities=20% Similarity=0.162 Sum_probs=106.7
Q ss_pred CcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhccccccceee
Q 006907 85 GFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRL 164 (626)
Q Consensus 85 ~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 164 (626)
..++.|+|++|.+++..+..|.++++|++|+|++|++++..|..|+++++|++|+|++|+++...+..|..+++|++|+|
T Consensus 69 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 148 (390)
T 3o6n_A 69 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 148 (390)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred ccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEEC
Confidence 46999999999999888889999999999999999999888888999999999999999999444445799999999999
Q ss_pred ccccccCCchhhhhcCCCCccccCCCCCCCCCCCccccC
Q 006907 165 NNNKLSGQIPTLVANLTSLSFLDLSFNNLSGPTPKVLAN 203 (626)
Q Consensus 165 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~ 203 (626)
++|++++..|..+.++++|+.|++++|++++.....+.+
T Consensus 149 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~ 187 (390)
T 3o6n_A 149 SNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPS 187 (390)
T ss_dssp CSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGCTT
T ss_pred CCCccCccChhhccCCCCCCEEECCCCcCCccccccccc
Confidence 999999888888999999999999999999875554443
No 342
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.38 E-value=2.9e-13 Score=148.63 Aligned_cols=108 Identities=26% Similarity=0.333 Sum_probs=69.6
Q ss_pred CcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCC--CCCcccCCccccceEecccccccCCCCch-hhccccccc
Q 006907 85 GFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSG--PIPVEFGMLSELQTLDLSNNQLVGEIPSS-LGFLTHLTY 161 (626)
Q Consensus 85 ~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~g~~p~~-~~~l~~L~~ 161 (626)
..++.|+|++|.+++.+|..++++++|++|+|++|++++ .+|..++++++|++|+|++|++++.+|.. +..+++|+.
T Consensus 324 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~ 403 (520)
T 2z7x_B 324 SPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLS 403 (520)
T ss_dssp CCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCE
T ss_pred CcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCE
Confidence 457777888887777777777777777777777777775 45566777777777777777777645543 555555555
Q ss_pred eeeccccccCCchhhhhcCCCCccccCCCCCCC
Q 006907 162 LRLNNNKLSGQIPTLVANLTSLSFLDLSFNNLS 194 (626)
Q Consensus 162 L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 194 (626)
|+|++|++++.+|..+. ++|+.|++++|+|+
T Consensus 404 L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~ 434 (520)
T 2z7x_B 404 LNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK 434 (520)
T ss_dssp EECCSSCCCGGGGGSCC--TTCCEEECCSSCCC
T ss_pred EECcCCCCCcchhhhhc--ccCCEEECCCCccc
Confidence 55555555544444332 34444444444444
No 343
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.38 E-value=7.1e-13 Score=123.36 Aligned_cols=102 Identities=27% Similarity=0.336 Sum_probs=89.6
Q ss_pred ceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhccccccceeeccccccCCchhhhhcCCCCccccCCCC
Q 006907 112 RTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRLNNNKLSGQIPTLVANLTSLSFLDLSFN 191 (626)
Q Consensus 112 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N 191 (626)
+.+++++|+|+ .+|..+. ++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|.++++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 68999999997 7888775 89999999999999888999999999999999999999766667899999999999999
Q ss_pred CCCCCCCccccCC-----ccccCCcccccC
Q 006907 192 NLSGPTPKVLANG-----YSFTGNSFLCTS 216 (626)
Q Consensus 192 ~l~~~~p~~~~~~-----~~~~~n~~lc~~ 216 (626)
+|++.++..+... +.+.+|++.|.+
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~ 121 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCEC 121 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTB
T ss_pred ccceeCHHHhccccCCCEEEeCCCCccccc
Confidence 9998887766543 457788887764
No 344
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.37 E-value=1.8e-13 Score=150.71 Aligned_cols=133 Identities=23% Similarity=0.410 Sum_probs=101.4
Q ss_pred CCCCCCCCCCCCc-----cceee-eeCCCCcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCcccc
Q 006907 62 VMDGWDINSVDPC-----TWNMV-ACSAEGFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSEL 135 (626)
Q Consensus 62 ~l~sW~~~~~~~C-----~w~gv-~C~~~~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 135 (626)
.+.+|.. +.+|| .|.|+ .|.. ++++.|+|++|+|++ +|..+. ++|++|+|++|+|+ .+| ..+++|
T Consensus 32 ~l~~W~~-~~~~~~~~~~~~~~l~~C~~-~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L 102 (571)
T 3cvr_A 32 AWDKWEK-QALPGENRNEAVSLLKECLI-NQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASL 102 (571)
T ss_dssp HHHHHHT-TCCTTCCHHHHHHHHHHHHH-TTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTC
T ss_pred HHHHHhc-cCCccccccchhhhcccccc-CCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCC
Confidence 3456754 45788 79999 7863 469999999999997 777663 78999999999999 678 457899
Q ss_pred ceEecccccccCCCCchhhccccccceeeccccccCCchhhhhcCCCCccccCCCCCCCCCCCccccC--CccccCCcc
Q 006907 136 QTLDLSNNQLVGEIPSSLGFLTHLTYLRLNNNKLSGQIPTLVANLTSLSFLDLSFNNLSGPTPKVLAN--GYSFTGNSF 212 (626)
Q Consensus 136 ~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~--~~~~~~n~~ 212 (626)
++|+|++|+|++ +|. +.. +|+.|+|++|+|++ +|. .+++|+.|+|++|+|++ +|..+.+ .+.+.+|..
T Consensus 103 ~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~~l~~L~~L~Ls~N~L 172 (571)
T 3cvr_A 103 EYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPELPTSLEVLSVRNNQL 172 (571)
T ss_dssp CEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCC
T ss_pred CEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCCcCCCcCEEECCCCCC
Confidence 999999999996 777 654 88999999999886 666 67888888888888887 4443333 234455543
No 345
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.37 E-value=4.6e-13 Score=148.57 Aligned_cols=111 Identities=26% Similarity=0.287 Sum_probs=99.5
Q ss_pred CcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhccccccceee
Q 006907 85 GFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRL 164 (626)
Q Consensus 85 ~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 164 (626)
.+++.|+|++|.+++..|..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|+ .+|.. .+++|++|+|
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 128 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDL 128 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEEC
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEEC
Confidence 57899999999999888889999999999999999999888899999999999999999999 67776 8999999999
Q ss_pred ccccccC-CchhhhhcCCCCccccCCCCCCCCCCC
Q 006907 165 NNNKLSG-QIPTLVANLTSLSFLDLSFNNLSGPTP 198 (626)
Q Consensus 165 ~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p 198 (626)
++|++++ .+|..|.++++|+.|++++|++++...
T Consensus 129 s~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~~~ 163 (562)
T 3a79_B 129 SFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQLDL 163 (562)
T ss_dssp CSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTTTT
T ss_pred CCCCccccCchHhhcccCcccEEecCCCccccCch
Confidence 9999996 456899999999999999999987433
No 346
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.37 E-value=5.1e-13 Score=137.85 Aligned_cols=116 Identities=28% Similarity=0.311 Sum_probs=66.4
Q ss_pred CcEEEEEeCCCCCc--ccCCccccCC--------------------cccceeeeccCCCCCCCCcccCCccccceEeccc
Q 006907 85 GFVVSLEMASMGLS--GTLSPSIGNL--------------------THLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSN 142 (626)
Q Consensus 85 ~~v~~l~L~~~~l~--~~~~~~~~~l--------------------~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 142 (626)
..++.|+|++|.++ +..+..+..+ ++|++|+|++|++++..|..|.++++|+.|+|++
T Consensus 147 ~~L~~L~l~~n~l~~~~~~~~~~~~l~L~~L~l~~n~l~~l~~~~~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~ 226 (332)
T 2ft3_A 147 RNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIPKDLPETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGH 226 (332)
T ss_dssp SSCCEEECCSCCCBGGGSCTTSSCSCCCSCCBCCSSBCSSCCSSSCSSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCS
T ss_pred ccCCEEECCCCccccCCCCcccccCCccCEEECcCCCCCccCccccCCCCEEECCCCcCCccCHHHhcCCCCCCEEECCC
Confidence 45778888888775 3556666655 3445555555555544445555555555555555
Q ss_pred ccccCCCCchhhccccccceeeccccccCCchhhhhcCCCCccccCCCCCCCCCCCccc
Q 006907 143 NQLVGEIPSSLGFLTHLTYLRLNNNKLSGQIPTLVANLTSLSFLDLSFNNLSGPTPKVL 201 (626)
Q Consensus 143 N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~ 201 (626)
|++++..|..+..+++|+.|+|++|+++ .+|..+..+++|+.|++++|+|++..+..+
T Consensus 227 N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~ 284 (332)
T 2ft3_A 227 NQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDF 284 (332)
T ss_dssp SCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSS
T ss_pred CcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHc
Confidence 5555544445555555555555555555 455555555555555555555555444443
No 347
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.37 E-value=1e-12 Score=135.41 Aligned_cols=114 Identities=24% Similarity=0.276 Sum_probs=77.0
Q ss_pred CcEEEEEeCCCCCcc--cCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhccccccce
Q 006907 85 GFVVSLEMASMGLSG--TLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYL 162 (626)
Q Consensus 85 ~~v~~l~L~~~~l~~--~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L 162 (626)
..++.|+|++|.+.. ..+..+.++++|++|++++|+++ .+|..+. ++|+.|+|++|++++..|..|..+++|+.|
T Consensus 145 ~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 221 (330)
T 1xku_A 145 NQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKL 221 (330)
T ss_dssp TTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEE
T ss_pred ccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEE
Confidence 457788888888753 66677777777777777777777 4555443 567777777777766666666667777777
Q ss_pred eeccccccCCchhhhhcCCCCccccCCCCCCCCCCCcccc
Q 006907 163 RLNNNKLSGQIPTLVANLTSLSFLDLSFNNLSGPTPKVLA 202 (626)
Q Consensus 163 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~ 202 (626)
+|++|++++..+..+..+++|+.|+|++|+++ .+|..+.
T Consensus 222 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~ 260 (330)
T 1xku_A 222 GLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLA 260 (330)
T ss_dssp ECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTT
T ss_pred ECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhc
Confidence 77777776555556666667777777777666 4444443
No 348
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.36 E-value=2.7e-13 Score=141.18 Aligned_cols=119 Identities=27% Similarity=0.247 Sum_probs=105.9
Q ss_pred CcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCc--hhhccccccce
Q 006907 85 GFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPS--SLGFLTHLTYL 162 (626)
Q Consensus 85 ~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~--~~~~l~~L~~L 162 (626)
..++.|+|++|.+++..|..|+++++|++|+|++|++++..+..|+++++|++|+|++|+++ .+|. .+..+++|+.|
T Consensus 76 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~L 154 (353)
T 2z80_A 76 VNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQIL 154 (353)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCEE
T ss_pred CCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcEE
Confidence 57999999999999988999999999999999999999655555999999999999999999 4555 79999999999
Q ss_pred eecccc-ccCCchhhhhcCCCCccccCCCCCCCCCCCccccCC
Q 006907 163 RLNNNK-LSGQIPTLVANLTSLSFLDLSFNNLSGPTPKVLANG 204 (626)
Q Consensus 163 ~l~~N~-l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~ 204 (626)
++++|+ +.+..|..+.++++|+.|++++|++++.+|..+.+.
T Consensus 155 ~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l 197 (353)
T 2z80_A 155 RVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSI 197 (353)
T ss_dssp EEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTC
T ss_pred ECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhcc
Confidence 999994 776667889999999999999999999888877653
No 349
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.36 E-value=2.7e-13 Score=138.69 Aligned_cols=113 Identities=24% Similarity=0.253 Sum_probs=98.5
Q ss_pred CcEEEEEeCCCCCcccCCccccCC-----cccceeeeccCCCCCCCCcccCCccccceEecccccccCC--CCchh--hc
Q 006907 85 GFVVSLEMASMGLSGTLSPSIGNL-----THLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGE--IPSSL--GF 155 (626)
Q Consensus 85 ~~v~~l~L~~~~l~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~--~p~~~--~~ 155 (626)
..++.|+|++|.+++. |..++.+ ++|++|+|++|++++..|..|+++++|++|+|++|++.|. +|..+ ..
T Consensus 121 ~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 199 (312)
T 1wwl_A 121 PDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLK 199 (312)
T ss_dssp CCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTS
T ss_pred CCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhcc
Confidence 4699999999999988 8888888 9999999999999988889999999999999999998876 34454 88
Q ss_pred cccccceeeccccccC--Cch-hhhhcCCCCccccCCCCCCCCCCC
Q 006907 156 LTHLTYLRLNNNKLSG--QIP-TLVANLTSLSFLDLSFNNLSGPTP 198 (626)
Q Consensus 156 l~~L~~L~l~~N~l~~--~~p-~~~~~l~~L~~L~l~~N~l~~~~p 198 (626)
+++|++|+|++|+|++ .++ ..+.++++|+.|+|++|++++.+|
T Consensus 200 l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 245 (312)
T 1wwl_A 200 FPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAG 245 (312)
T ss_dssp CTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCC
T ss_pred CCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccc
Confidence 9999999999999993 223 345688999999999999999875
No 350
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.36 E-value=2.6e-13 Score=149.98 Aligned_cols=120 Identities=27% Similarity=0.236 Sum_probs=109.4
Q ss_pred CcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccC-CCCchhhcccccccee
Q 006907 85 GFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVG-EIPSSLGFLTHLTYLR 163 (626)
Q Consensus 85 ~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g-~~p~~~~~l~~L~~L~ 163 (626)
.++++|+|++|.+++..|..|+++++|++|+|++|++++..|..|+++++|++|+|++|.+++ .+|..++++++|++|+
T Consensus 50 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~ 129 (549)
T 2z81_A 50 ANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLR 129 (549)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEE
T ss_pred CcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEE
Confidence 579999999999999999999999999999999999998777779999999999999999996 4678899999999999
Q ss_pred eccccccCCch-hhhhcCCCCccccCCCCCCCCCCCccccCC
Q 006907 164 LNNNKLSGQIP-TLVANLTSLSFLDLSFNNLSGPTPKVLANG 204 (626)
Q Consensus 164 l~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~ 204 (626)
|++|++.+.+| ..+.++++|+.|++++|++++.+|..+.+.
T Consensus 130 L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l 171 (549)
T 2z81_A 130 IGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSI 171 (549)
T ss_dssp EEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTC
T ss_pred CCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhcc
Confidence 99999665666 689999999999999999999999887653
No 351
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.35 E-value=4e-13 Score=137.32 Aligned_cols=117 Identities=20% Similarity=0.143 Sum_probs=81.8
Q ss_pred CcEEEEEeCCCCCcccCC----ccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCC--C--Cchhhcc
Q 006907 85 GFVVSLEMASMGLSGTLS----PSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGE--I--PSSLGFL 156 (626)
Q Consensus 85 ~~v~~l~L~~~~l~~~~~----~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~--~--p~~~~~l 156 (626)
..++.|+|++|.+++..+ ..+..+++|++|+|++|++++..|..|+++++|++|+|++|++.+. + +..+..+
T Consensus 117 ~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l 196 (310)
T 4glp_A 117 LALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKF 196 (310)
T ss_dssp BCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSS
T ss_pred CCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcC
Confidence 357778888888776554 3445677888888888888777777777888888888888877642 2 2234667
Q ss_pred ccccceeeccccccCCchh----hhhcCCCCccccCCCCCCCCCCCcccc
Q 006907 157 THLTYLRLNNNKLSGQIPT----LVANLTSLSFLDLSFNNLSGPTPKVLA 202 (626)
Q Consensus 157 ~~L~~L~l~~N~l~~~~p~----~~~~l~~L~~L~l~~N~l~~~~p~~~~ 202 (626)
++|++|+|++|+++ .+|. .+.++++|+.|+|++|+|++..|..+.
T Consensus 197 ~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~ 245 (310)
T 4glp_A 197 PAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAP 245 (310)
T ss_dssp CCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCS
T ss_pred CCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHH
Confidence 77888888888776 3443 246677788888888888777665544
No 352
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.34 E-value=3.6e-13 Score=125.57 Aligned_cols=105 Identities=24% Similarity=0.292 Sum_probs=94.2
Q ss_pred cEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCc--hhhcccccccee
Q 006907 86 FVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPS--SLGFLTHLTYLR 163 (626)
Q Consensus 86 ~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~--~~~~l~~L~~L~ 163 (626)
.++.|+|++|.|++. +.|+.+++|++|+|++|+|++..|..|..+++|++|+|++|+|+ .+|. .+..+++|+.|+
T Consensus 43 ~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~ 119 (176)
T 1a9n_A 43 QFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLC 119 (176)
T ss_dssp CCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEE
T ss_pred CCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEE
Confidence 699999999999986 68999999999999999999654455699999999999999997 6776 899999999999
Q ss_pred eccccccCCchhh----hhcCCCCccccCCCCCCC
Q 006907 164 LNNNKLSGQIPTL----VANLTSLSFLDLSFNNLS 194 (626)
Q Consensus 164 l~~N~l~~~~p~~----~~~l~~L~~L~l~~N~l~ 194 (626)
|++|.++ .+|.. +..+++|+.||+++|.+.
T Consensus 120 l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 120 ILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred ecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 9999999 56764 999999999999999865
No 353
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.34 E-value=6.8e-13 Score=130.13 Aligned_cols=115 Identities=18% Similarity=0.133 Sum_probs=100.6
Q ss_pred CcEEEEEeCCCC-CcccCCccccCCcccceeeecc-CCCCCCCCcccCCccccceEecccccccCCCCchhhcccccc--
Q 006907 85 GFVVSLEMASMG-LSGTLSPSIGNLTHLRTMLLHN-NQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLT-- 160 (626)
Q Consensus 85 ~~v~~l~L~~~~-l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~-- 160 (626)
.+++.|+|++|. +++..+..|.++++|++|+|++ |++++..+..|.++++|++|+|++|++++ +|. |..+++|+
T Consensus 55 ~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L 132 (239)
T 2xwt_C 55 PNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIF 132 (239)
T ss_dssp TTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSE
T ss_pred CCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccc
Confidence 479999999997 8877777999999999999998 99997666789999999999999999995 776 88889998
Q ss_pred -ceeeccc-cccCCchhhhhcCCCCc-cccCCCCCCCCCCCccc
Q 006907 161 -YLRLNNN-KLSGQIPTLVANLTSLS-FLDLSFNNLSGPTPKVL 201 (626)
Q Consensus 161 -~L~l~~N-~l~~~~p~~~~~l~~L~-~L~l~~N~l~~~~p~~~ 201 (626)
.|++++| ++++..+..|.++++|+ .|++++|+++..++..+
T Consensus 133 ~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~ 176 (239)
T 2xwt_C 133 FILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAF 176 (239)
T ss_dssp EEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTT
T ss_pred cEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhc
Confidence 9999999 99966667799999999 99999999984444333
No 354
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.34 E-value=9.5e-13 Score=149.98 Aligned_cols=109 Identities=23% Similarity=0.260 Sum_probs=93.6
Q ss_pred CCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhccccccceeeccccccCCchhhhhcC
Q 006907 101 LSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRLNNNKLSGQIPTLVANL 180 (626)
Q Consensus 101 ~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l 180 (626)
.+..+..+++|+.|+|++|++. .+|..+.++++|++|+|++|.|+ .+|..|++|++|+.|+|++|+|+ .+|..|.+|
T Consensus 216 ~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l 292 (727)
T 4b8c_D 216 PKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSC 292 (727)
T ss_dssp ------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGG
T ss_pred ChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCC
Confidence 3667889999999999999999 88988999999999999999999 99999999999999999999999 889999999
Q ss_pred CCCccccCCCCCCCCCCCccccCC-----ccccCCccc
Q 006907 181 TSLSFLDLSFNNLSGPTPKVLANG-----YSFTGNSFL 213 (626)
Q Consensus 181 ~~L~~L~l~~N~l~~~~p~~~~~~-----~~~~~n~~l 213 (626)
++|+.|+|++|.|+ .+|..|++. +.+.+|.+.
T Consensus 293 ~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~ 329 (727)
T 4b8c_D 293 FQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLE 329 (727)
T ss_dssp TTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCC
T ss_pred CCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccC
Confidence 99999999999997 667767653 345677654
No 355
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.32 E-value=9.2e-13 Score=144.61 Aligned_cols=114 Identities=23% Similarity=0.221 Sum_probs=72.6
Q ss_pred cEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccC--CCCchhhcccccccee
Q 006907 86 FVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVG--EIPSSLGFLTHLTYLR 163 (626)
Q Consensus 86 ~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g--~~p~~~~~l~~L~~L~ 163 (626)
.++.|++++|++.+.. .+..+++|++|+|++|++++.+|..++++++|++|+|++|++++ .+|..+..+++|+.|+
T Consensus 303 ~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~ 380 (520)
T 2z7x_B 303 NIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLD 380 (520)
T ss_dssp CCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEE
T ss_pred ceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEE
Confidence 3666666666665332 12466666777777777766666666667777777777776664 4455666667777777
Q ss_pred eccccccCCchhh-hhcCCCCccccCCCCCCCCCCCccc
Q 006907 164 LNNNKLSGQIPTL-VANLTSLSFLDLSFNNLSGPTPKVL 201 (626)
Q Consensus 164 l~~N~l~~~~p~~-~~~l~~L~~L~l~~N~l~~~~p~~~ 201 (626)
|++|++++.+|.. +..+++|+.|++++|++++.+|..+
T Consensus 381 Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l 419 (520)
T 2z7x_B 381 ISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCL 419 (520)
T ss_dssp CCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSC
T ss_pred CCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhh
Confidence 7777776545543 5666667777777777666655544
No 356
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.30 E-value=7.6e-13 Score=143.95 Aligned_cols=115 Identities=22% Similarity=0.244 Sum_probs=101.7
Q ss_pred CcEEEEEeCCCCCcccCCcccc-CCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhcccccccee
Q 006907 85 GFVVSLEMASMGLSGTLSPSIG-NLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLR 163 (626)
Q Consensus 85 ~~v~~l~L~~~~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 163 (626)
..++.|+|++|.|++.+|..+. .+++|++|+|++|.|++. | .+..+++|+.|+|++|.|++ +|..+..+++|+.|+
T Consensus 144 ~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~ 220 (487)
T 3oja_A 144 SRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWIS 220 (487)
T ss_dssp SSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEE
T ss_pred CCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-c-ccccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEE
Confidence 4799999999999999998886 899999999999999965 3 34569999999999999996 555699999999999
Q ss_pred eccccccCCchhhhhcCCCCccccCCCCCCC-CCCCccccC
Q 006907 164 LNNNKLSGQIPTLVANLTSLSFLDLSFNNLS-GPTPKVLAN 203 (626)
Q Consensus 164 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~-~~~p~~~~~ 203 (626)
|++|.|+ .+|..+..+++|+.|++++|++. +.+|..+..
T Consensus 221 Ls~N~l~-~lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~ 260 (487)
T 3oja_A 221 LRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSK 260 (487)
T ss_dssp CTTSCCC-EECTTCCCCTTCCEEECTTCCBCHHHHHHHHTT
T ss_pred ecCCcCc-ccchhhccCCCCCEEEcCCCCCcCcchHHHHHh
Confidence 9999999 48888999999999999999998 666665554
No 357
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.29 E-value=2.4e-12 Score=131.47 Aligned_cols=110 Identities=15% Similarity=0.169 Sum_probs=97.3
Q ss_pred cEEEEEeCCCCCcccCCccc--cCCcccceeeeccCCCCCCCC----cccCCccccceEecccccccCCCCchhhccccc
Q 006907 86 FVVSLEMASMGLSGTLSPSI--GNLTHLRTMLLHNNQLSGPIP----VEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHL 159 (626)
Q Consensus 86 ~v~~l~L~~~~l~~~~~~~~--~~l~~L~~L~L~~N~l~~~~p----~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L 159 (626)
++++|+|++|.+++..|..+ ..+++|++|+|++|++++..| ..+..+++|++|+|++|++++..|..|..+++|
T Consensus 92 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L 171 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPAL 171 (310)
T ss_dssp CCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTC
T ss_pred ceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCC
Confidence 49999999999999999988 999999999999999998766 455689999999999999998888999999999
Q ss_pred cceeeccccccCC--ch--hhhhcCCCCccccCCCCCCCC
Q 006907 160 TYLRLNNNKLSGQ--IP--TLVANLTSLSFLDLSFNNLSG 195 (626)
Q Consensus 160 ~~L~l~~N~l~~~--~p--~~~~~l~~L~~L~l~~N~l~~ 195 (626)
++|+|++|++.+. ++ ..+..+++|+.|+|++|+++.
T Consensus 172 ~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~ 211 (310)
T 4glp_A 172 TSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET 211 (310)
T ss_dssp CEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC
T ss_pred CEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc
Confidence 9999999998753 32 234789999999999999974
No 358
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.29 E-value=5.6e-14 Score=133.77 Aligned_cols=107 Identities=24% Similarity=0.256 Sum_probs=52.0
Q ss_pred cEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhccccccceeec
Q 006907 86 FVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRLN 165 (626)
Q Consensus 86 ~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~ 165 (626)
.++.|+|++|.+++ +| .+.++++|++|+|++|+++ .+|..+..+++|+.|+|++|++++ +| .+..+++|+.|+|+
T Consensus 49 ~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~ 123 (198)
T 1ds9_A 49 ACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMS 123 (198)
T ss_dssp TCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEES
T ss_pred CCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECC
Confidence 34555555555544 33 4555555555555555555 344444444555555555555553 33 34455555555555
Q ss_pred cccccCCch-hhhhcCCCCccccCCCCCCCCCC
Q 006907 166 NNKLSGQIP-TLVANLTSLSFLDLSFNNLSGPT 197 (626)
Q Consensus 166 ~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~ 197 (626)
+|++++..+ ..+..+++|+.|++++|++++.+
T Consensus 124 ~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~ 156 (198)
T 1ds9_A 124 NNKITNWGEIDKLAALDKLEDLLLAGNPLYNDY 156 (198)
T ss_dssp EEECCCHHHHHHHTTTTTCSEEEECSCHHHHHH
T ss_pred CCcCCchhHHHHHhcCCCCCEEEecCCcccccc
Confidence 555552111 24445555555555555554443
No 359
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.29 E-value=6.4e-12 Score=127.10 Aligned_cols=106 Identities=29% Similarity=0.402 Sum_probs=87.6
Q ss_pred CcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhccccccceee
Q 006907 85 GFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRL 164 (626)
Q Consensus 85 ~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 164 (626)
.+++.|+|++|.+++..+ +.++++|++|+|++|++++ +| .+.++++|++|+|++|++++ + ..+..+++|+.|+|
T Consensus 68 ~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~l 141 (291)
T 1h6t_A 68 PNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYL 141 (291)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEEC
T ss_pred CCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEEc
Confidence 468889999999887555 8889999999999999885 44 48888999999999999885 3 46888889999999
Q ss_pred ccccccCCchhhhhcCCCCccccCCCCCCCCCCC
Q 006907 165 NNNKLSGQIPTLVANLTSLSFLDLSFNNLSGPTP 198 (626)
Q Consensus 165 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 198 (626)
++|++++. ..+..+++|+.|++++|++++.+|
T Consensus 142 ~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~ 173 (291)
T 1h6t_A 142 GNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP 173 (291)
T ss_dssp CSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG
T ss_pred cCCcCCcc--hhhccCCCCCEEEccCCccccchh
Confidence 99998854 568888899999999999887665
No 360
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.28 E-value=1.3e-11 Score=122.72 Aligned_cols=145 Identities=12% Similarity=-0.015 Sum_probs=112.6
Q ss_pred HHhCCCCcCceeccCCCceEEEEEeCCccEEEEEEecCCCcccHHHHHHHHHHHHhcc-CCcccceeeeeecCCceEEEE
Q 006907 300 IATGNFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLAL-HRNLLRLYGFCMTPEERLLVY 378 (626)
Q Consensus 300 ~~~~~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lv~ 378 (626)
...+.|.....++.|+.+.||+.... +..+++|+...........+.+|+++++.+. +..+.++++++.+.+..++||
T Consensus 11 ~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~ 89 (263)
T 3tm0_A 11 KLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLM 89 (263)
T ss_dssp HHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEE
T ss_pred HHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEE
Confidence 34456877888888889999998754 5679999986422222346889999999885 677889999998888999999
Q ss_pred eecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-----------------------------------
Q 006907 379 PYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQC----------------------------------- 423 (626)
Q Consensus 379 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~----------------------------------- 423 (626)
||++|.+|.+.+.. ......++.++++++..||+..
T Consensus 90 e~i~G~~l~~~~~~---------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (263)
T 3tm0_A 90 SEADGVLCSEEYED---------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEE 160 (263)
T ss_dssp ECCSSEEHHHHCCT---------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGST
T ss_pred EecCCeehhhccCC---------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccc
Confidence 99999998876321 1223477889999999999810
Q ss_pred ---------------------CCCeEecCCCCCcEEeCCCCcEEEeeccCcc
Q 006907 424 ---------------------NPKIIHRDVKAANILLDESFEAVVGDFGLAK 454 (626)
Q Consensus 424 ---------------------~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~ 454 (626)
.+.++|+|++|.||+++++..+.|+||+.+.
T Consensus 161 ~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 161 DTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp TCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred cccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1358999999999999876566799999875
No 361
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.27 E-value=3.5e-12 Score=132.43 Aligned_cols=104 Identities=22% Similarity=0.230 Sum_probs=92.5
Q ss_pred ceeeeccC-CCCCCCCcccCCccccceEeccc-ccccCCCCchhhccccccceeeccccccCCchhhhhcCCCCccccCC
Q 006907 112 RTMLLHNN-QLSGPIPVEFGMLSELQTLDLSN-NQLVGEIPSSLGFLTHLTYLRLNNNKLSGQIPTLVANLTSLSFLDLS 189 (626)
Q Consensus 112 ~~L~L~~N-~l~~~~p~~~~~l~~L~~L~L~~-N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~ 189 (626)
..+++++| +|+ .+|. |..+++|+.|+|++ |+|++..|..|.+|++|+.|+|++|+|++..|..|.+|++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35689998 999 6898 99999999999996 99998888899999999999999999999889999999999999999
Q ss_pred CCCCCCCCCccccC----CccccCCcccccCC
Q 006907 190 FNNLSGPTPKVLAN----GYSFTGNSFLCTSS 217 (626)
Q Consensus 190 ~N~l~~~~p~~~~~----~~~~~~n~~lc~~~ 217 (626)
+|+|++.+|..+.. .+.+.+|++.|.+.
T Consensus 89 ~N~l~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 120 (347)
T 2ifg_A 89 FNALESLSWKTVQGLSLQELVLSGNPLHCSCA 120 (347)
T ss_dssp SSCCSCCCSTTTCSCCCCEEECCSSCCCCCGG
T ss_pred CCccceeCHHHcccCCceEEEeeCCCccCCCc
Confidence 99999888776654 34678999988754
No 362
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.25 E-value=1.2e-13 Score=131.56 Aligned_cols=125 Identities=22% Similarity=0.328 Sum_probs=104.6
Q ss_pred cEEEEEeCCCCCcccCCc------cccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhccccc
Q 006907 86 FVVSLEMASMGLSGTLSP------SIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHL 159 (626)
Q Consensus 86 ~v~~l~L~~~~l~~~~~~------~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L 159 (626)
+++.++|+.+.++|.+|. .+..+++|++|+|++|++++ +| .+.++++|++|+|++|.++ .+|..+..+++|
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L 95 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTL 95 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHC
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcC
Confidence 466677777777777776 89999999999999999996 78 9999999999999999999 789999999999
Q ss_pred cceeeccccccCCchhhhhcCCCCccccCCCCCCCCCCC-ccccC-----CccccCCccccc
Q 006907 160 TYLRLNNNKLSGQIPTLVANLTSLSFLDLSFNNLSGPTP-KVLAN-----GYSFTGNSFLCT 215 (626)
Q Consensus 160 ~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~-----~~~~~~n~~lc~ 215 (626)
+.|+|++|++++ +| .+.++++|+.|++++|++++..+ ..+.. ...+.+|+..+.
T Consensus 96 ~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~ 155 (198)
T 1ds9_A 96 EELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYND 155 (198)
T ss_dssp SEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHH
T ss_pred CEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccc
Confidence 999999999995 66 68999999999999999997443 33333 234567766544
No 363
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.25 E-value=1.5e-11 Score=122.52 Aligned_cols=103 Identities=28% Similarity=0.340 Sum_probs=68.1
Q ss_pred CcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhccccccceee
Q 006907 85 GFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRL 164 (626)
Q Consensus 85 ~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 164 (626)
..++.|+|++|.|++..+ +.++++|++|+|++|++++ +|.. .. ++|+.|+|++|++++ +| .+..+++|+.|+|
T Consensus 63 ~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~~-~~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~L 135 (263)
T 1xeu_A 63 TNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNGI-PS-ACLSRLFLDNNELRD-TD-SLIHLKNLEILSI 135 (263)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTTC-CC-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCcc-cc-CcccEEEccCCccCC-Ch-hhcCcccccEEEC
Confidence 356777777777765444 6777777777777777774 4432 22 677777777777774 33 4667777777777
Q ss_pred ccccccCCchhhhhcCCCCccccCCCCCCCCC
Q 006907 165 NNNKLSGQIPTLVANLTSLSFLDLSFNNLSGP 196 (626)
Q Consensus 165 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 196 (626)
++|++++ +| .+..+++|+.|+|++|++++.
T Consensus 136 s~N~i~~-~~-~l~~l~~L~~L~L~~N~i~~~ 165 (263)
T 1xeu_A 136 RNNKLKS-IV-MLGFLSKLEVLDLHGNEITNT 165 (263)
T ss_dssp TTSCCCB-CG-GGGGCTTCCEEECTTSCCCBC
T ss_pred CCCcCCC-Ch-HHccCCCCCEEECCCCcCcch
Confidence 7777774 33 566777777777777777665
No 364
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.24 E-value=1.8e-12 Score=132.84 Aligned_cols=115 Identities=22% Similarity=0.247 Sum_probs=101.0
Q ss_pred CcEEEEEeCCCCCcccCCccc-cCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhcccccccee
Q 006907 85 GFVVSLEMASMGLSGTLSPSI-GNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLR 163 (626)
Q Consensus 85 ~~v~~l~L~~~~l~~~~~~~~-~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 163 (626)
..++.|+|++|.+++..+..+ ..+++|++|+|++|++++. | ....+++|++|+|++|+++ .+|..+..+++|+.|+
T Consensus 144 ~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~ 220 (317)
T 3o53_A 144 SRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWIS 220 (317)
T ss_dssp SSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCC-EECGGGGGGTTCSEEE
T ss_pred CCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCC-cchhhhcccCcccEEE
Confidence 469999999999999888777 4799999999999999954 4 3445999999999999999 4666799999999999
Q ss_pred eccccccCCchhhhhcCCCCccccCCCCCCC-CCCCccccC
Q 006907 164 LNNNKLSGQIPTLVANLTSLSFLDLSFNNLS-GPTPKVLAN 203 (626)
Q Consensus 164 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~-~~~p~~~~~ 203 (626)
|++|+|+ .+|..+..+++|+.|++++|+++ +.+|..+..
T Consensus 221 L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~ 260 (317)
T 3o53_A 221 LRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSK 260 (317)
T ss_dssp CTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHT
T ss_pred CcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhc
Confidence 9999999 68889999999999999999999 666666554
No 365
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.24 E-value=1.4e-11 Score=125.76 Aligned_cols=106 Identities=27% Similarity=0.452 Sum_probs=71.6
Q ss_pred CcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhccccccceee
Q 006907 85 GFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRL 164 (626)
Q Consensus 85 ~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 164 (626)
.+++.|+|++|.+++..+ +.++++|++|+|++|++++ +| .+.++++|+.|+|++|++++ +|. +..+++|+.|+|
T Consensus 63 ~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l 136 (308)
T 1h6u_A 63 NNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYL 136 (308)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEEC
T ss_pred CCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEEC
Confidence 357777777777765444 7777777777777777774 33 57777777777777777774 333 677777777777
Q ss_pred ccccccCCchhhhhcCCCCccccCCCCCCCCCCC
Q 006907 165 NNNKLSGQIPTLVANLTSLSFLDLSFNNLSGPTP 198 (626)
Q Consensus 165 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 198 (626)
++|++++..+ +..+++|+.|++++|++++..+
T Consensus 137 ~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~ 168 (308)
T 1h6u_A 137 DLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP 168 (308)
T ss_dssp CSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG
T ss_pred CCCccCcCcc--ccCCCCccEEEccCCcCCCChh
Confidence 7777774332 6677777777777777765443
No 366
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.24 E-value=1.4e-11 Score=127.78 Aligned_cols=107 Identities=31% Similarity=0.400 Sum_probs=73.3
Q ss_pred cEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhccccccceeec
Q 006907 86 FVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRLN 165 (626)
Q Consensus 86 ~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~ 165 (626)
.++.|+|++|.+++..+ +..+++|++|+|++|.+++ + ..+..+++|++|+|++|++++ + +.+..+++|+.|+|+
T Consensus 222 ~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~L~ 295 (347)
T 4fmz_A 222 RLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNVGSNQISD-I-SVLNNLSQLNSLFLN 295 (347)
T ss_dssp TCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEECC
T ss_pred cCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEccCCccCC-C-hhhcCCCCCCEEECc
Confidence 46667777777665433 6677777777777777764 3 356677777777777777774 3 346677777777777
Q ss_pred cccccCCchhhhhcCCCCccccCCCCCCCCCCC
Q 006907 166 NNKLSGQIPTLVANLTSLSFLDLSFNNLSGPTP 198 (626)
Q Consensus 166 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 198 (626)
+|++++..|..+..+++|+.|++++|++++.+|
T Consensus 296 ~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~ 328 (347)
T 4fmz_A 296 NNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP 328 (347)
T ss_dssp SSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG
T ss_pred CCcCCCcChhHhhccccCCEEEccCCccccccC
Confidence 777776666777777777777777777776655
No 367
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.23 E-value=1.2e-11 Score=126.07 Aligned_cols=106 Identities=30% Similarity=0.428 Sum_probs=90.4
Q ss_pred CcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhccccccceee
Q 006907 85 GFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRL 164 (626)
Q Consensus 85 ~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 164 (626)
.+++.|+|++|.+++. +.+.++++|++|+|++|++++ +|. +..+++|++|+|++|++++. |. +..+++|+.|+|
T Consensus 85 ~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~l 158 (308)
T 1h6u_A 85 TKITELELSGNPLKNV--SAIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNI-SP-LAGLTNLQYLSI 158 (308)
T ss_dssp CSCCEEECCSCCCSCC--GGGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCC-GG-GGGCTTCCEEEC
T ss_pred CCCCEEEccCCcCCCc--hhhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcC-cc-ccCCCCccEEEc
Confidence 5799999999999864 368999999999999999995 453 89999999999999999954 43 889999999999
Q ss_pred ccccccCCchhhhhcCCCCccccCCCCCCCCCCC
Q 006907 165 NNNKLSGQIPTLVANLTSLSFLDLSFNNLSGPTP 198 (626)
Q Consensus 165 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 198 (626)
++|++++ ++. +.++++|+.|++++|++++..|
T Consensus 159 ~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~ 190 (308)
T 1h6u_A 159 GNAQVSD-LTP-LANLSKLTTLKADDNKISDISP 190 (308)
T ss_dssp CSSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG
T ss_pred cCCcCCC-Chh-hcCCCCCCEEECCCCccCcChh
Confidence 9999995 444 8899999999999999987655
No 368
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.23 E-value=7.4e-12 Score=130.19 Aligned_cols=126 Identities=17% Similarity=0.192 Sum_probs=84.2
Q ss_pred ccceeeeeCCC----------CcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCc-ccCCccccce-Eecc
Q 006907 74 CTWNMVACSAE----------GFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPV-EFGMLSELQT-LDLS 141 (626)
Q Consensus 74 C~w~gv~C~~~----------~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~-L~L~ 141 (626)
|.|..|.|+.. ..+++|+|++|+|+...+..|.+|++|++|+|++|++.+.+|. .|.++++|+. ++++
T Consensus 9 C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 9 CSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp EETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred eeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 68889999631 2467777777777755556677777777777777777655553 4667777654 5556
Q ss_pred cccccCCCCchhhccccccceeeccccccCCchhhhhcCCCCccccCCC-CCCCCCCCc
Q 006907 142 NNQLVGEIPSSLGFLTHLTYLRLNNNKLSGQIPTLVANLTSLSFLDLSF-NNLSGPTPK 199 (626)
Q Consensus 142 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~-N~l~~~~p~ 199 (626)
+|+|++..|..|..+++|+.|++++|++++..+..+....++..|++.+ |++....+.
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~ 147 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERN 147 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTT
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhcccccccccccc
Confidence 6777766667777777777777777777755555555556666666644 445444433
No 369
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.23 E-value=1.1e-11 Score=137.13 Aligned_cols=101 Identities=27% Similarity=0.300 Sum_probs=91.3
Q ss_pred CcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCC-Cchhhcccccccee
Q 006907 85 GFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEI-PSSLGFLTHLTYLR 163 (626)
Q Consensus 85 ~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~-p~~~~~l~~L~~L~ 163 (626)
..++.|+|++|.|+ .+|..|++|++|++|+|++|+|++ +| .|+++++|+.|+|++|+|++.+ |..|+.+++|+.|+
T Consensus 463 ~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~ 539 (567)
T 1dce_A 463 LLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLN 539 (567)
T ss_dssp TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEE
T ss_pred ccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEE
Confidence 46999999999999 889999999999999999999996 78 8999999999999999999877 99999999999999
Q ss_pred eccccccCCchh---hhhcCCCCccccC
Q 006907 164 LNNNKLSGQIPT---LVANLTSLSFLDL 188 (626)
Q Consensus 164 l~~N~l~~~~p~---~~~~l~~L~~L~l 188 (626)
|++|+|++.+|. .+..+++|+.|++
T Consensus 540 L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 540 LQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp CTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred ecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 999999976552 3455889998864
No 370
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.22 E-value=2.1e-11 Score=123.29 Aligned_cols=105 Identities=30% Similarity=0.363 Sum_probs=93.7
Q ss_pred CCcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhcccccccee
Q 006907 84 EGFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLR 163 (626)
Q Consensus 84 ~~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 163 (626)
..+++.|+|++|.+++. +.+..+++|++|+|++|++++ + ..+..+++|+.|+|++|++++. ..+..+++|+.|+
T Consensus 89 l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~ 162 (291)
T 1h6t_A 89 LKNLGWLFLDENKVKDL--SSLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLS 162 (291)
T ss_dssp CTTCCEEECCSSCCCCG--GGGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEE
T ss_pred CCCCCEEECCCCcCCCC--hhhccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEE
Confidence 35799999999999873 349999999999999999996 4 4799999999999999999964 6799999999999
Q ss_pred eccccccCCchhhhhcCCCCccccCCCCCCCCC
Q 006907 164 LNNNKLSGQIPTLVANLTSLSFLDLSFNNLSGP 196 (626)
Q Consensus 164 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 196 (626)
|++|++++..| +..+++|+.|++++|+|++.
T Consensus 163 L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~l 193 (291)
T 1h6t_A 163 LEDNQISDIVP--LAGLTKLQNLYLSKNHISDL 193 (291)
T ss_dssp CCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC
T ss_pred ccCCccccchh--hcCCCccCEEECCCCcCCCC
Confidence 99999996554 89999999999999999874
No 371
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.21 E-value=2.4e-11 Score=135.09 Aligned_cols=106 Identities=29% Similarity=0.401 Sum_probs=84.5
Q ss_pred CcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhccccccceee
Q 006907 85 GFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRL 164 (626)
Q Consensus 85 ~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 164 (626)
..++.|+|++|.|++..| +.+|++|+.|+|++|+|++ +| .+..+++|+.|+|++|+|++ + ..+..|++|+.|+|
T Consensus 65 ~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~L 138 (605)
T 1m9s_A 65 PNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYL 138 (605)
T ss_dssp TTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEEC
T ss_pred CCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEEC
Confidence 468888888888887655 8888888888888888884 44 68888888888888888884 3 45788888888888
Q ss_pred ccccccCCchhhhhcCCCCccccCCCCCCCCCCC
Q 006907 165 NNNKLSGQIPTLVANLTSLSFLDLSFNNLSGPTP 198 (626)
Q Consensus 165 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 198 (626)
++|+|++. ..+..+++|+.|+|++|+|++.+|
T Consensus 139 s~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~ 170 (605)
T 1m9s_A 139 GNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP 170 (605)
T ss_dssp CSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG
T ss_pred CCCccCCc--hhhcccCCCCEEECcCCcCCCchh
Confidence 88888854 567788888888888888887766
No 372
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.19 E-value=9.3e-12 Score=137.07 Aligned_cols=111 Identities=24% Similarity=0.301 Sum_probs=77.2
Q ss_pred cEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhccccccceeec
Q 006907 86 FVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRLN 165 (626)
Q Consensus 86 ~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~ 165 (626)
.++.|+|++|.|++ +|. .+++|++|+|++|+|++ +|. .+++|++|+|++|+|++ +|. |. ++|+.|+|+
T Consensus 121 ~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls 188 (571)
T 3cvr_A 121 SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVS 188 (571)
T ss_dssp TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECC
T ss_pred CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECc
Confidence 46666666666665 444 56778888888888885 665 56788888888888885 776 65 788888888
Q ss_pred cccccCCchhhhhcCCCC-------ccccCCCCCCCCCCCccccCC-----ccccCCccc
Q 006907 166 NNKLSGQIPTLVANLTSL-------SFLDLSFNNLSGPTPKVLANG-----YSFTGNSFL 213 (626)
Q Consensus 166 ~N~l~~~~p~~~~~l~~L-------~~L~l~~N~l~~~~p~~~~~~-----~~~~~n~~l 213 (626)
+|+|+ .+|. +.. +| +.|+|++|+|+. +|..+.+. +.+.+|+..
T Consensus 189 ~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~L~~N~l~ 243 (571)
T 3cvr_A 189 TNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRITH-IPENILSLDPTCTIILEDNPLS 243 (571)
T ss_dssp SSCCS-SCCC-CC----------CCEEEECCSSCCCC-CCGGGGGSCTTEEEECCSSSCC
T ss_pred CCCCC-chhh-HHH--hhhcccccceEEecCCCccee-cCHHHhcCCCCCEEEeeCCcCC
Confidence 88888 6666 544 66 888888888884 56554432 245566654
No 373
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.17 E-value=4.9e-11 Score=118.73 Aligned_cols=103 Identities=23% Similarity=0.305 Sum_probs=90.2
Q ss_pred CcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhccccccceee
Q 006907 85 GFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRL 164 (626)
Q Consensus 85 ~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 164 (626)
..++.|+|++|+++. ++ .+..+++|++|+|++|+|++. |. +.++++|++|+|++|++++ +|... . ++|+.|+|
T Consensus 41 ~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~-~~-l~~l~~L~~L~L~~N~l~~-l~~~~-~-~~L~~L~L 113 (263)
T 1xeu_A 41 SGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDL-SP-LKDLTKLEELSVNRNRLKN-LNGIP-S-ACLSRLFL 113 (263)
T ss_dssp TTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCSSCCEEECCSSCCSC-CTTCC-C-SSCCEEEC
T ss_pred CcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCC-hh-hccCCCCCEEECCCCccCC-cCccc-c-CcccEEEc
Confidence 468999999999984 45 799999999999999999965 44 9999999999999999995 55433 3 99999999
Q ss_pred ccccccCCchhhhhcCCCCccccCCCCCCCCC
Q 006907 165 NNNKLSGQIPTLVANLTSLSFLDLSFNNLSGP 196 (626)
Q Consensus 165 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 196 (626)
++|++++ +| .+.++++|+.|++++|+|++.
T Consensus 114 ~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~ 143 (263)
T 1xeu_A 114 DNNELRD-TD-SLIHLKNLEILSIRNNKLKSI 143 (263)
T ss_dssp CSSCCSB-SG-GGTTCTTCCEEECTTSCCCBC
T ss_pred cCCccCC-Ch-hhcCcccccEEECCCCcCCCC
Confidence 9999995 44 589999999999999999986
No 374
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.16 E-value=3e-11 Score=125.18 Aligned_cols=104 Identities=30% Similarity=0.361 Sum_probs=93.1
Q ss_pred CcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhccccccceee
Q 006907 85 GFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRL 164 (626)
Q Consensus 85 ~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 164 (626)
..++.|+|++|.+++. +.+..+++|++|+|++|++++. ..+..+++|+.|+|++|.+++..|..+..+++|+.|+|
T Consensus 243 ~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L 318 (347)
T 4fmz_A 243 SQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFL 318 (347)
T ss_dssp TTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEEC
T ss_pred CCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEc
Confidence 5799999999999874 5789999999999999999964 46899999999999999999989999999999999999
Q ss_pred ccccccCCchhhhhcCCCCccccCCCCCCC
Q 006907 165 NNNKLSGQIPTLVANLTSLSFLDLSFNNLS 194 (626)
Q Consensus 165 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 194 (626)
++|++++..| +..+++|+.|++++|+|+
T Consensus 319 ~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 319 SQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp CSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred cCCccccccC--hhhhhccceeehhhhccc
Confidence 9999997666 889999999999999986
No 375
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.16 E-value=3.8e-11 Score=133.53 Aligned_cols=104 Identities=31% Similarity=0.378 Sum_probs=92.2
Q ss_pred CcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhccccccceee
Q 006907 85 GFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRL 164 (626)
Q Consensus 85 ~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 164 (626)
.+++.|+|++|.|++. +.+..+++|+.|+|++|+|++ + ..+..|++|+.|+|++|+|++. ..+..|++|+.|+|
T Consensus 87 ~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~L 160 (605)
T 1m9s_A 87 KNLGWLFLDENKIKDL--SSLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSL 160 (605)
T ss_dssp TTCCEEECCSSCCCCC--TTSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEEC
T ss_pred CCCCEEECcCCCCCCC--hhhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEEC
Confidence 5699999999999863 378999999999999999995 4 4689999999999999999964 67899999999999
Q ss_pred ccccccCCchhhhhcCCCCccccCCCCCCCCC
Q 006907 165 NNNKLSGQIPTLVANLTSLSFLDLSFNNLSGP 196 (626)
Q Consensus 165 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 196 (626)
++|+|++..| +..+++|+.|+|++|+|++.
T Consensus 161 s~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l 190 (605)
T 1m9s_A 161 EDNQISDIVP--LAGLTKLQNLYLSKNHISDL 190 (605)
T ss_dssp CSSCCCCCGG--GTTCTTCCEEECCSSCCCBC
T ss_pred cCCcCCCchh--hccCCCCCEEECcCCCCCCC
Confidence 9999997666 89999999999999999875
No 376
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.15 E-value=9.3e-12 Score=138.68 Aligned_cols=118 Identities=26% Similarity=0.375 Sum_probs=84.8
Q ss_pred CCCCCCCCCCCCccceeeeeC------C-CCcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccc
Q 006907 62 VMDGWDINSVDPCTWNMVACS------A-EGFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSE 134 (626)
Q Consensus 62 ~l~sW~~~~~~~C~w~gv~C~------~-~~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 134 (626)
+.++|.. +.+||.|+|..|. . ...++.|++++|+|+ .+|..+. ++|++|+|++|+|+ .+|. .+++
T Consensus 11 ~w~~W~~-~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~ 82 (622)
T 3g06_A 11 VWSAWRR-AAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPE 82 (622)
T ss_dssp HHHHHHH-TCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTT
T ss_pred HHHHHHh-cCCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCC
Confidence 4566764 4678999774331 0 124788899988888 6676665 78888888888888 5665 5678
Q ss_pred cceEecccccccCCCCchhhccccccceeeccccccCCchhhhhcCCCCccccCCCCCCCC
Q 006907 135 LQTLDLSNNQLVGEIPSSLGFLTHLTYLRLNNNKLSGQIPTLVANLTSLSFLDLSFNNLSG 195 (626)
Q Consensus 135 L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 195 (626)
|++|+|++|+|+ .+|. .+++|++|+|++|+|++ +|. .+++|+.|++++|+|++
T Consensus 83 L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~ 135 (622)
T 3g06_A 83 LRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS 135 (622)
T ss_dssp CCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSC
T ss_pred CCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCc
Confidence 888888888888 5665 56788888888888874 444 45667777777777665
No 377
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.14 E-value=5.7e-11 Score=128.49 Aligned_cols=103 Identities=34% Similarity=0.425 Sum_probs=66.0
Q ss_pred cEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhccccccceeec
Q 006907 86 FVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRLN 165 (626)
Q Consensus 86 ~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~ 165 (626)
+++.|+|++|.+++..+ +..+++|++|+|++|++++..| +..+++|+.|+|++|++++..| +..+++|+.|+|+
T Consensus 244 ~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~ 317 (466)
T 1o6v_A 244 NLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLY 317 (466)
T ss_dssp TCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECC
T ss_pred CCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECc
Confidence 56777777777766544 6667777777777777764333 6666677777777776664333 5666666666666
Q ss_pred cccccCCchhhhhcCCCCccccCCCCCCCCC
Q 006907 166 NNKLSGQIPTLVANLTSLSFLDLSFNNLSGP 196 (626)
Q Consensus 166 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 196 (626)
+|++++..| +..+++|+.|++++|++++.
T Consensus 318 ~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~ 346 (466)
T 1o6v_A 318 FNNISDISP--VSSLTKLQRLFFYNNKVSDV 346 (466)
T ss_dssp SSCCSCCGG--GGGCTTCCEEECCSSCCCCC
T ss_pred CCcCCCchh--hccCccCCEeECCCCccCCc
Confidence 666665444 55666666666666666654
No 378
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.12 E-value=1.7e-10 Score=114.21 Aligned_cols=129 Identities=15% Similarity=0.075 Sum_probs=97.1
Q ss_pred ccCCCceEEEEEeCCccEEEEEEecCCCcccHHHHHHHHHHHHhccCCc--ccceeeeeecCCceEEEEeecCCCChHHH
Q 006907 312 GQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRN--LLRLYGFCMTPEERLLVYPYMPNGSVADC 389 (626)
Q Consensus 312 G~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--Iv~l~~~~~~~~~~~lv~E~~~~gsL~~~ 389 (626)
+.|..+.||+....+|..+++|..... ....+..|+++++.+.+.+ +.+++++...++..++||||++|.+|.
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~-- 103 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL-- 103 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--
Confidence 455569999998777778999997654 2245788999998886544 556888888878889999999998884
Q ss_pred HhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcC----------------------------------------------
Q 006907 390 LRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQC---------------------------------------------- 423 (626)
Q Consensus 390 l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~---------------------------------------------- 423 (626)
... .+ ...++.++++.+..||+..
T Consensus 104 ~~~-------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (264)
T 1nd4_A 104 SSH-------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFAR 173 (264)
T ss_dssp TSC-------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHH
T ss_pred cCc-------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHH
Confidence 211 11 2356777888888888642
Q ss_pred ---------CCCeEecCCCCCcEEeCCCCcEEEeeccCccc
Q 006907 424 ---------NPKIIHRDVKAANILLDESFEAVVGDFGLAKL 455 (626)
Q Consensus 424 ---------~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~ 455 (626)
.+.++|+|++|.||+++++..+.|+|||.+..
T Consensus 174 l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 174 LKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 11399999999999998876677999998753
No 379
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.10 E-value=1.2e-11 Score=133.14 Aligned_cols=48 Identities=15% Similarity=0.052 Sum_probs=17.4
Q ss_pred cEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccc
Q 006907 86 FVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSE 134 (626)
Q Consensus 86 ~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 134 (626)
++++|++++|++ |.+|.+|++|++|++|+|++|+++|.+|..++++++
T Consensus 12 ~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~ 59 (454)
T 1jl5_A 12 FLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQRE 59 (454)
T ss_dssp -----------------------CCHHHHHHHHHHHHHTSCTTSCCCHH
T ss_pred cchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchh
Confidence 466677777777 667777777777777777777776666666665543
No 380
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.09 E-value=9.1e-12 Score=131.29 Aligned_cols=117 Identities=21% Similarity=0.275 Sum_probs=97.2
Q ss_pred CcEEEEEeCCCCCc-ccCC---ccccCCcccceeeeccCCCC--C---CCCcccCCccccceEeccccccc----CCCCc
Q 006907 85 GFVVSLEMASMGLS-GTLS---PSIGNLTHLRTMLLHNNQLS--G---PIPVEFGMLSELQTLDLSNNQLV----GEIPS 151 (626)
Q Consensus 85 ~~v~~l~L~~~~l~-~~~~---~~~~~l~~L~~L~L~~N~l~--~---~~p~~~~~l~~L~~L~L~~N~l~----g~~p~ 151 (626)
..++.|+|++|.++ +.++ ..+..+++|++|+|++|+++ | .+|..+.++++|+.|+|++|.++ +.+|.
T Consensus 159 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~ 238 (386)
T 2ca6_A 159 PPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAI 238 (386)
T ss_dssp CCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHH
T ss_pred CCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHH
Confidence 57999999999997 4455 57778899999999999998 3 35558889999999999999996 67888
Q ss_pred hhhccccccceeeccccccCC----chhhhhc--CCCCccccCCCCCCCC----CCCccc
Q 006907 152 SLGFLTHLTYLRLNNNKLSGQ----IPTLVAN--LTSLSFLDLSFNNLSG----PTPKVL 201 (626)
Q Consensus 152 ~~~~l~~L~~L~l~~N~l~~~----~p~~~~~--l~~L~~L~l~~N~l~~----~~p~~~ 201 (626)
.+..+++|+.|+|++|.+++. +|..+.. +++|+.|+|++|++++ .+|..+
T Consensus 239 ~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l 298 (386)
T 2ca6_A 239 ALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVI 298 (386)
T ss_dssp HGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHH
T ss_pred HHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHH
Confidence 899999999999999999865 5677744 8999999999999998 466554
No 381
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.09 E-value=1.7e-10 Score=124.69 Aligned_cols=106 Identities=37% Similarity=0.512 Sum_probs=90.2
Q ss_pred CcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhccccccceee
Q 006907 85 GFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRL 164 (626)
Q Consensus 85 ~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 164 (626)
..++.|+|++|.+++. +.+..+++|++|+|++|++++..| +..+++|+.|+|++|.+++..| +..+++|+.|+|
T Consensus 221 ~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L 294 (466)
T 1o6v_A 221 TNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLEL 294 (466)
T ss_dssp TTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEEC
T ss_pred CCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEc
Confidence 4688999999998864 468889999999999999996554 8899999999999999995443 888999999999
Q ss_pred ccccccCCchhhhhcCCCCccccCCCCCCCCCCC
Q 006907 165 NNNKLSGQIPTLVANLTSLSFLDLSFNNLSGPTP 198 (626)
Q Consensus 165 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 198 (626)
++|++++..| +..+++|+.|++++|++++.+|
T Consensus 295 ~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~ 326 (466)
T 1o6v_A 295 NENQLEDISP--ISNLKNLTYLTLYFNNISDISP 326 (466)
T ss_dssp CSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG
T ss_pred CCCcccCchh--hcCCCCCCEEECcCCcCCCchh
Confidence 9999996544 7889999999999999998776
No 382
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.08 E-value=2.1e-10 Score=123.53 Aligned_cols=100 Identities=23% Similarity=0.252 Sum_probs=64.3
Q ss_pred CcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhccccccceee
Q 006907 85 GFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRL 164 (626)
Q Consensus 85 ~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 164 (626)
.+++.|+|++|.+++. + ++++++|++|++++|+..+.+ .++.+++|+.|+|++|++++ +| +..+++|+.|++
T Consensus 127 ~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l 198 (457)
T 3bz5_A 127 PLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNC 198 (457)
T ss_dssp TTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEEC
T ss_pred CcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce-ec--cccCCCCCEEEC
Confidence 4677888888888764 2 666777777777777555455 36666666666666666664 44 556666666666
Q ss_pred ccccccCCchhhhhcCCCCccccCCCCCCCC
Q 006907 165 NNNKLSGQIPTLVANLTSLSFLDLSFNNLSG 195 (626)
Q Consensus 165 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 195 (626)
++|++++. .+..+++|+.|++++|++++
T Consensus 199 ~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~ 226 (457)
T 3bz5_A 199 DTNNITKL---DLNQNIQLTFLDCSSNKLTE 226 (457)
T ss_dssp CSSCCSCC---CCTTCTTCSEEECCSSCCSC
T ss_pred cCCcCCee---ccccCCCCCEEECcCCcccc
Confidence 66666643 25566666666666666665
No 383
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.08 E-value=8.8e-12 Score=128.57 Aligned_cols=107 Identities=21% Similarity=0.233 Sum_probs=48.5
Q ss_pred EEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCC-CCcccCCccccceEecccccccCCCCchhhccccccceeec
Q 006907 87 VVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGP-IPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRLN 165 (626)
Q Consensus 87 v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~ 165 (626)
++.|+|++|.+.+..+. +.++++|++|+|++|.+++. +|..+.++++|++|+|++|.+++..|..+..+++|++|+|+
T Consensus 72 l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~ 150 (336)
T 2ast_B 72 VIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLS 150 (336)
T ss_dssp CSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECT
T ss_pred ceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECC
Confidence 44444444444443332 23344444444444444433 44444444444444444444444444444444444444444
Q ss_pred cc-cccCC-chhhhhcCCCCccccCCCC-CCC
Q 006907 166 NN-KLSGQ-IPTLVANLTSLSFLDLSFN-NLS 194 (626)
Q Consensus 166 ~N-~l~~~-~p~~~~~l~~L~~L~l~~N-~l~ 194 (626)
+| .+++. +|..+.++++|+.|++++| .++
T Consensus 151 ~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~ 182 (336)
T 2ast_B 151 GCSGFSEFALQTLLSSCSRLDELNLSWCFDFT 182 (336)
T ss_dssp TCBSCCHHHHHHHHHHCTTCCEEECCCCTTCC
T ss_pred CCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcC
Confidence 44 34431 3444444444444444444 444
No 384
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.07 E-value=1.8e-10 Score=124.04 Aligned_cols=105 Identities=23% Similarity=0.231 Sum_probs=79.9
Q ss_pred CcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhccccccceee
Q 006907 85 GFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRL 164 (626)
Q Consensus 85 ~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l 164 (626)
..++.|+|++|.+++ +| ++.+++|+.|+|++|++++. .++++++|+.|+|++|++++ +| +..+++|+.|++
T Consensus 170 ~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l 240 (457)
T 3bz5_A 170 TQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDC 240 (457)
T ss_dssp TTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEEC
T ss_pred CcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEe
Confidence 468888888888887 34 77888888888888888864 37888888888888888886 66 778888888888
Q ss_pred ccccccCCchhhhhcCC-------CCccccCCCCCCCCCCC
Q 006907 165 NNNKLSGQIPTLVANLT-------SLSFLDLSFNNLSGPTP 198 (626)
Q Consensus 165 ~~N~l~~~~p~~~~~l~-------~L~~L~l~~N~l~~~~p 198 (626)
++|++++..+..+.+|. +|+.|++++|++.|.+|
T Consensus 241 ~~N~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~ 281 (457)
T 3bz5_A 241 SVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ 281 (457)
T ss_dssp CSSCCSCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEE
T ss_pred eCCcCCCcCHHHCCCCCEEeccCCCCCEEECCCCccCCccc
Confidence 88888876555555554 55667777777666665
No 385
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.06 E-value=1.1e-11 Score=127.88 Aligned_cols=116 Identities=21% Similarity=0.238 Sum_probs=92.1
Q ss_pred CcEEEEEeCCCCCccc-CCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccc-cccCC-CCchhhccccccc
Q 006907 85 GFVVSLEMASMGLSGT-LSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNN-QLVGE-IPSSLGFLTHLTY 161 (626)
Q Consensus 85 ~~v~~l~L~~~~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~g~-~p~~~~~l~~L~~ 161 (626)
.+++.|+|++|.+++. ++..+.++++|++|+|++|++++..|..++++++|++|+|++| .+++. +|..+..+++|++
T Consensus 93 ~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~ 172 (336)
T 2ast_B 93 FRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDE 172 (336)
T ss_dssp BCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCE
T ss_pred CCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCE
Confidence 4688899998888866 7778888889999999988888778888888888899999888 67753 6667888888888
Q ss_pred eeeccc-cccCC-chhhhhcCC-CCccccCCCC--CCC-CCCCcc
Q 006907 162 LRLNNN-KLSGQ-IPTLVANLT-SLSFLDLSFN--NLS-GPTPKV 200 (626)
Q Consensus 162 L~l~~N-~l~~~-~p~~~~~l~-~L~~L~l~~N--~l~-~~~p~~ 200 (626)
|+|++| .+++. ++..+.+++ +|+.|++++| .++ +.+|..
T Consensus 173 L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~ 217 (336)
T 2ast_B 173 LNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTL 217 (336)
T ss_dssp EECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHH
T ss_pred EcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHH
Confidence 888888 88754 677788888 8888888888 454 334443
No 386
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.03 E-value=1.6e-10 Score=124.40 Aligned_cols=62 Identities=27% Similarity=0.455 Sum_probs=39.6
Q ss_pred cccceEecccccccCCCCchhhccccccceeeccccccCCchhhhhcCCCCccccCCCCCCCC--CCCcccc
Q 006907 133 SELQTLDLSNNQLVGEIPSSLGFLTHLTYLRLNNNKLSGQIPTLVANLTSLSFLDLSFNNLSG--PTPKVLA 202 (626)
Q Consensus 133 ~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~--~~p~~~~ 202 (626)
++|++|+|++|++++ +|.. +++|+.|+|++|+++ .+|. .+++|+.|++++|++++ .+|..+.
T Consensus 317 ~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~ 380 (454)
T 1jl5_A 317 PSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLREFPDIPESVE 380 (454)
T ss_dssp TTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSSCCCCCTTCC
T ss_pred CcCCEEECCCCcccc-cccc---CCcCCEEECCCCccc-cccc---hhhhccEEECCCCCCCcCCCChHHHH
Confidence 466677777777664 5543 466777777777776 4555 35667777777777776 5565543
No 387
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.02 E-value=4.5e-11 Score=124.79 Aligned_cols=114 Identities=22% Similarity=0.193 Sum_probs=76.3
Q ss_pred cEEEEEeCCCCCcccCC----ccccCCc-ccceeeeccCCCCCCCCcccCCc-----cccceEecccccccCCCCchhhc
Q 006907 86 FVVSLEMASMGLSGTLS----PSIGNLT-HLRTMLLHNNQLSGPIPVEFGML-----SELQTLDLSNNQLVGEIPSSLGF 155 (626)
Q Consensus 86 ~v~~l~L~~~~l~~~~~----~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~g~~p~~~~~ 155 (626)
.++.|+|++|.|++..+ ..|.+++ +|++|+|++|++++..+..+..+ ++|++|+|++|++++..+..+..
T Consensus 23 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~ 102 (362)
T 3goz_A 23 GVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVK 102 (362)
T ss_dssp TCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHH
T ss_pred CceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHH
Confidence 37777777777776655 5666676 77777777777776666666665 77777777777777666654444
Q ss_pred c-----ccccceeeccccccCCchhhhhc-----CCCCccccCCCCCCCCCCCc
Q 006907 156 L-----THLTYLRLNNNKLSGQIPTLVAN-----LTSLSFLDLSFNNLSGPTPK 199 (626)
Q Consensus 156 l-----~~L~~L~l~~N~l~~~~p~~~~~-----l~~L~~L~l~~N~l~~~~p~ 199 (626)
. ++|+.|+|++|++++..+..+.. .++|+.|+|++|++++..+.
T Consensus 103 ~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~ 156 (362)
T 3goz_A 103 TLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSD 156 (362)
T ss_dssp HHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHH
T ss_pred HHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHH
Confidence 3 67777777777777655544433 24777777777777754443
No 388
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.02 E-value=1.6e-10 Score=128.69 Aligned_cols=84 Identities=30% Similarity=0.463 Sum_probs=41.8
Q ss_pred cccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhccccccceeeccccccCCchhhhhcCCCCccccC
Q 006907 109 THLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRLNNNKLSGQIPTLVANLTSLSFLDL 188 (626)
Q Consensus 109 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 188 (626)
++|++|+|++|+|++ +| ..+++|+.|+|++|+|+ .+|. .+++|+.|+|++|+|+ .+|..+.++++|+.|+|
T Consensus 221 ~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L 291 (622)
T 3g06_A 221 SGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNL 291 (622)
T ss_dssp TTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEEC
T ss_pred CCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEe
Confidence 344444444444442 33 23344555555555555 3443 3445555555555555 44555555555555555
Q ss_pred CCCCCCCCCCccc
Q 006907 189 SFNNLSGPTPKVL 201 (626)
Q Consensus 189 ~~N~l~~~~p~~~ 201 (626)
++|++++.+|..+
T Consensus 292 ~~N~l~~~~~~~l 304 (622)
T 3g06_A 292 EGNPLSERTLQAL 304 (622)
T ss_dssp CSCCCCHHHHHHH
T ss_pred cCCCCCCcCHHHH
Confidence 5555555555443
No 389
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.02 E-value=4.3e-11 Score=125.01 Aligned_cols=116 Identities=23% Similarity=0.224 Sum_probs=81.3
Q ss_pred cEEEEEeCCCCCcccCCccccCC-----cccceeeeccCCCCCCCCcccCCc-----cccceEecccccccCCCCchhhc
Q 006907 86 FVVSLEMASMGLSGTLSPSIGNL-----THLRTMLLHNNQLSGPIPVEFGML-----SELQTLDLSNNQLVGEIPSSLGF 155 (626)
Q Consensus 86 ~v~~l~L~~~~l~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~g~~p~~~~~ 155 (626)
++++|+|++|.|++..+..+..+ ++|++|+|++|++++..+..+... ++|++|+|++|+|++..+..+..
T Consensus 52 ~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~ 131 (362)
T 3goz_A 52 SVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQ 131 (362)
T ss_dssp TCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHH
T ss_pred ceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHH
Confidence 57888888888877767666665 788888888888876666544443 77888888888887665555443
Q ss_pred -----cccccceeeccccccCC----chhhhhcCC-CCccccCCCCCCCCCCCccc
Q 006907 156 -----LTHLTYLRLNNNKLSGQ----IPTLVANLT-SLSFLDLSFNNLSGPTPKVL 201 (626)
Q Consensus 156 -----l~~L~~L~l~~N~l~~~----~p~~~~~l~-~L~~L~l~~N~l~~~~p~~~ 201 (626)
.++|++|+|++|++++. ++..+..++ +|+.|+|++|++++..+..+
T Consensus 132 ~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l 187 (362)
T 3goz_A 132 AFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAEL 187 (362)
T ss_dssp HHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHH
T ss_pred HHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHH
Confidence 25788888888888753 334445555 78888888888877666443
No 390
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.01 E-value=2.6e-10 Score=118.39 Aligned_cols=111 Identities=14% Similarity=0.128 Sum_probs=93.1
Q ss_pred EEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCc-hhhccccccc-eeecc
Q 006907 89 SLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPS-SLGFLTHLTY-LRLNN 166 (626)
Q Consensus 89 ~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~-~~~~l~~L~~-L~l~~ 166 (626)
+++-++++|+ .+|..+ .++|++|+|++|+|+...+..|.++++|++|+|++|++.+.+|. .|.++++|++ +.+++
T Consensus 13 ~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~ 89 (350)
T 4ay9_X 13 VFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 89 (350)
T ss_dssp EEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEE
T ss_pred EEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccC
Confidence 4678899998 667666 36899999999999954445799999999999999999877764 5788998875 66778
Q ss_pred ccccCCchhhhhcCCCCccccCCCCCCCCCCCcccc
Q 006907 167 NKLSGQIPTLVANLTSLSFLDLSFNNLSGPTPKVLA 202 (626)
Q Consensus 167 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~ 202 (626)
|++++..|..|.++++|+.|++++|+|++.++..+.
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~ 125 (350)
T 4ay9_X 90 NNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKI 125 (350)
T ss_dssp TTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTC
T ss_pred CcccccCchhhhhccccccccccccccccCCchhhc
Confidence 999977788999999999999999999987775543
No 391
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.99 E-value=1.9e-09 Score=112.25 Aligned_cols=142 Identities=14% Similarity=0.216 Sum_probs=106.2
Q ss_pred cCceeccCCCceEEEEEeCCccEEEEEEec--CCC-cccHHHHHHHHHHHHhcc--CCcccceeeeeecC---CceEEEE
Q 006907 307 PKNILGQGGYGVVYKGCLPNRMVVAVKRLK--DPN-FTGEVQFQTEVEMIGLAL--HRNLLRLYGFCMTP---EERLLVY 378 (626)
Q Consensus 307 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~--~~~-~~~~~~~~~E~~~l~~l~--h~nIv~l~~~~~~~---~~~~lv~ 378 (626)
..+.++.|.++.||+....+ ..+++|+.. ... ......+.+|+++++.+. +..+.++++++.+. +..++||
T Consensus 42 ~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred eEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 35678999999999988765 467888765 222 123446888999999887 45688889988776 4579999
Q ss_pred eecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-----------------------------------
Q 006907 379 PYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQC----------------------------------- 423 (626)
Q Consensus 379 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~----------------------------------- 423 (626)
||++|..+.+.. ...++...+..++.++++.|..||+..
T Consensus 121 e~v~G~~l~~~~------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (359)
T 3dxp_A 121 EFVSGRVLWDQS------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESI 194 (359)
T ss_dssp ECCCCBCCCCTT------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCC
T ss_pred EecCCeecCCCc------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCC
Confidence 999998775311 123678888999999999999999731
Q ss_pred --------------------CCCeEecCCCCCcEEeCCCCc--EEEeeccCccc
Q 006907 424 --------------------NPKIIHRDVKAANILLDESFE--AVVGDFGLAKL 455 (626)
Q Consensus 424 --------------------~~~ivH~Dlkp~NILl~~~~~--~ki~DfG~a~~ 455 (626)
.+.++|+|+++.||+++.++. +.|+||+.+..
T Consensus 195 ~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 195 PAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred hHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 247999999999999997653 68999998864
No 392
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=98.97 E-value=6.4e-11 Score=124.73 Aligned_cols=112 Identities=21% Similarity=0.315 Sum_probs=97.2
Q ss_pred CcEEEEEeCCCCCcc----cCCccccCC---------cccceeeeccCCCC-CCCC---cccCCccccceEeccccccc-
Q 006907 85 GFVVSLEMASMGLSG----TLSPSIGNL---------THLRTMLLHNNQLS-GPIP---VEFGMLSELQTLDLSNNQLV- 146 (626)
Q Consensus 85 ~~v~~l~L~~~~l~~----~~~~~~~~l---------~~L~~L~L~~N~l~-~~~p---~~~~~l~~L~~L~L~~N~l~- 146 (626)
..++.|+|++|.+++ .++..+..+ ++|++|+|++|+++ +.+| ..+..+++|+.|+|++|+++
T Consensus 122 ~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~ 201 (386)
T 2ca6_A 122 TPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRP 201 (386)
T ss_dssp TTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCH
T ss_pred CCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCH
Confidence 469999999999973 466777777 89999999999998 4555 46778999999999999998
Q ss_pred -C---CCCchhhccccccceeecccccc----CCchhhhhcCCCCccccCCCCCCCCC
Q 006907 147 -G---EIPSSLGFLTHLTYLRLNNNKLS----GQIPTLVANLTSLSFLDLSFNNLSGP 196 (626)
Q Consensus 147 -g---~~p~~~~~l~~L~~L~l~~N~l~----~~~p~~~~~l~~L~~L~l~~N~l~~~ 196 (626)
| .+|..+..+++|+.|+|++|.++ +.+|..+..+++|+.|+|++|+|++.
T Consensus 202 ~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~ 259 (386)
T 2ca6_A 202 EGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSAR 259 (386)
T ss_dssp HHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHH
T ss_pred hHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchh
Confidence 3 35558889999999999999996 67899999999999999999999876
No 393
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.93 E-value=8.4e-10 Score=112.18 Aligned_cols=187 Identities=20% Similarity=0.192 Sum_probs=122.7
Q ss_pred CceeccCCCceEEEEEeCCccEEEEEEecCCCcccHHHHHHHHHHHHhcc-CCc--ccceeeeeecCC---ceEEEEeec
Q 006907 308 KNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLAL-HRN--LLRLYGFCMTPE---ERLLVYPYM 381 (626)
Q Consensus 308 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~n--Iv~l~~~~~~~~---~~~lv~E~~ 381 (626)
.+.++.|.+..||+.. ..+++|+.... .....+..|.++++.+. +.. +.+++......+ ..|+|||++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 4568999999999852 34888886432 23456889999998874 333 344555443333 348899999
Q ss_pred CCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhc---------------------------------------
Q 006907 382 PNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQ--------------------------------------- 422 (626)
Q Consensus 382 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~--------------------------------------- 422 (626)
+|.++.+.... .++..++..++.++++.++.||+.
T Consensus 99 ~G~~l~~~~~~------~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (304)
T 3sg8_A 99 KGVPLTPLLLN------NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKK 172 (304)
T ss_dssp CCEECCHHHHH------TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHH
T ss_pred CCeECCccccc------cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHH
Confidence 99888754321 267778888889999999998861
Q ss_pred ----------------CCCCeEecCCCCCcEEeCC--CCcEEEeeccCccccCCCCCceeee-------------ecccC
Q 006907 423 ----------------CNPKIIHRDVKAANILLDE--SFEAVVGDFGLAKLLDRRDSHVTTA-------------VRGTV 471 (626)
Q Consensus 423 ----------------~~~~ivH~Dlkp~NILl~~--~~~~ki~DfG~a~~~~~~~~~~~~~-------------~~gt~ 471 (626)
..+.++|+|++|.||++++ +..+.|+||+.+...++........ .....
T Consensus 173 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y 252 (304)
T 3sg8_A 173 VDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHY 252 (304)
T ss_dssp HHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHc
Confidence 1245899999999999998 5567899999987543211000000 00001
Q ss_pred CccC-ccccccCCCCccchhHHHHHHHHHHHhCCCcCC
Q 006907 472 GHIA-PEYLSTGQSSEKTDVFGFGVLLLELITGQKALD 508 (626)
Q Consensus 472 ~y~a-PE~~~~~~~t~~~DvwSlGvil~elltg~~p~~ 508 (626)
++.. |+..... ....+.|++|.++|.+.+|..+|.
T Consensus 253 ~~~~~~~~~~r~--~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 253 KHKDIPTVLEKY--RMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp TCSCHHHHHHHH--HHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred CCCCcHHHHHHH--HHHHHHHHHHHHHHHHHcCCHHHH
Confidence 1122 2222111 123689999999999999998763
No 394
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.88 E-value=8.7e-11 Score=116.01 Aligned_cols=158 Identities=20% Similarity=0.173 Sum_probs=101.3
Q ss_pred CCCCchHHHHHHHHHHHHcc-CCCCCCCCCCCC-------------CCCCccceeeeeCCC-CcEEEEEeCC---CCCcc
Q 006907 38 SPKGVNYEVAALMALKIKMR-DDLHVMDGWDIN-------------SVDPCTWNMVACSAE-GFVVSLEMAS---MGLSG 99 (626)
Q Consensus 38 ~~~~~~~~~~al~~~k~~~~-~~~~~l~sW~~~-------------~~~~C~w~gv~C~~~-~~v~~l~L~~---~~l~~ 99 (626)
.+.+..+|.+-|+.+=...- .|- ..-.|... ....|+|.|+.|+.. .+|+.+...+ ..+.+
T Consensus 29 I~~g~ky~k~~ll~~i~~~~~~~f-~p~~~~~~~~~~~ffV~~~~~A~~l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~ 107 (267)
T 3rw6_A 29 IPYGRKYDKAWLLSMIQSKCSVPF-TPIEFHYENTRAQFFVEDASTASALKAVNYKILDRENRRISIIINSSAPPHTILN 107 (267)
T ss_dssp ETTGGGSCHHHHHHHHHHTCSSCC-CCEEEEEETTEEEEEESCHHHHHHHHHTTSSCBCTTSCBCCCEEEECCCCHHHHT
T ss_pred ecCccccCHHHHHHHHHHhCCCCc-EeEEEEEeCCEEEEEeCChHHHHHHHhcCcEEECCCCCEEEEEEecCCCcccccc
Confidence 45566777777766555443 221 11123200 113579999999854 3665555544 22233
Q ss_pred cCCc------------------------cccCCcccce--eeeccCCCCCCCCc----ccCCccccceEecccccccC--
Q 006907 100 TLSP------------------------SIGNLTHLRT--MLLHNNQLSGPIPV----EFGMLSELQTLDLSNNQLVG-- 147 (626)
Q Consensus 100 ~~~~------------------------~~~~l~~L~~--L~L~~N~l~~~~p~----~~~~l~~L~~L~L~~N~l~g-- 147 (626)
.+++ .|...+.|.. ++++.|+.. .++. ...++++|+.|+|++|+|++
T Consensus 108 ~l~~~~~~~Lk~~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~~~-~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~ 186 (267)
T 3rw6_A 108 ELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRRS-CMAATLRIIEENIPELLSLNLSNNRLYRLD 186 (267)
T ss_dssp SCCHHHHHHHHHHHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTSHH-HHHHHHHHHHHHCTTCCEEECTTSCCCCCG
T ss_pred cCCHHHHHHHHHHHHhccchhccccCHHHcCCCcchhhcCccccCCHHH-HHHHHHHHHHhhCCCCCEEECCCCCCCCCc
Confidence 3321 1333444554 666777543 3332 22468899999999999997
Q ss_pred CCCchhhccccccceeeccccccCCchhhhhcCC--CCccccCCCCCCCCCCCc
Q 006907 148 EIPSSLGFLTHLTYLRLNNNKLSGQIPTLVANLT--SLSFLDLSFNNLSGPTPK 199 (626)
Q Consensus 148 ~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~--~L~~L~l~~N~l~~~~p~ 199 (626)
.+|..+..+++|+.|+|++|+|++. ..+..+. +|+.|+|++|++++.+|.
T Consensus 187 ~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~ 238 (267)
T 3rw6_A 187 DMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRD 238 (267)
T ss_dssp GGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSS
T ss_pred cchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCc
Confidence 5677888999999999999999964 3455555 899999999999987763
No 395
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.74 E-value=2.3e-10 Score=123.22 Aligned_cols=115 Identities=18% Similarity=0.166 Sum_probs=81.2
Q ss_pred CcEEEEEeCCCCCcccC-----CccccCCcccceeeeccCCCCCC----CCcccCCccccceEecccccccCCCCchhhc
Q 006907 85 GFVVSLEMASMGLSGTL-----SPSIGNLTHLRTMLLHNNQLSGP----IPVEFGMLSELQTLDLSNNQLVGEIPSSLGF 155 (626)
Q Consensus 85 ~~v~~l~L~~~~l~~~~-----~~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~ 155 (626)
..++.|+|++|.+++.- +..+..+++|++|+|++|++++. +|..+.++++|++|+|++|.+++..+..+..
T Consensus 227 ~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~ 306 (461)
T 1z7x_W 227 ASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCE 306 (461)
T ss_dssp TTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHH
T ss_pred CCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHH
Confidence 45788888888876532 22233578888888888888753 5667777888888888888877544444443
Q ss_pred c-----ccccceeeccccccCC----chhhhhcCCCCccccCCCCCCCCCCCc
Q 006907 156 L-----THLTYLRLNNNKLSGQ----IPTLVANLTSLSFLDLSFNNLSGPTPK 199 (626)
Q Consensus 156 l-----~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~p~ 199 (626)
. ++|+.|+|++|.+++. +|..+..+++|+.|++++|++++..+.
T Consensus 307 ~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~ 359 (461)
T 1z7x_W 307 TLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVR 359 (461)
T ss_dssp HHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHH
T ss_pred HhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHH
Confidence 3 5788888888888755 566677778888888888887765444
No 396
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.74 E-value=5.8e-10 Score=120.10 Aligned_cols=118 Identities=18% Similarity=0.143 Sum_probs=93.6
Q ss_pred CcEEEEEeCCCCCccc----CCccccCCcccceeeeccCCCCCCCCcccCC-----ccccceEecccccccCC----CCc
Q 006907 85 GFVVSLEMASMGLSGT----LSPSIGNLTHLRTMLLHNNQLSGPIPVEFGM-----LSELQTLDLSNNQLVGE----IPS 151 (626)
Q Consensus 85 ~~v~~l~L~~~~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-----l~~L~~L~L~~N~l~g~----~p~ 151 (626)
..++.|+|++|.+++. ++..+.++++|++|+|++|.+++..+..+.. .++|+.|+|++|.+++. +|.
T Consensus 256 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~ 335 (461)
T 1z7x_W 256 SRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSS 335 (461)
T ss_dssp CCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHH
T ss_pred CCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHH
Confidence 5799999999999864 6778888999999999999997654444443 26899999999999865 567
Q ss_pred hhhccccccceeeccccccCCchhhhhc-----CCCCccccCCCCCCCC----CCCcccc
Q 006907 152 SLGFLTHLTYLRLNNNKLSGQIPTLVAN-----LTSLSFLDLSFNNLSG----PTPKVLA 202 (626)
Q Consensus 152 ~~~~l~~L~~L~l~~N~l~~~~p~~~~~-----l~~L~~L~l~~N~l~~----~~p~~~~ 202 (626)
.+..+++|+.|+|++|++++..+..+.. .++|+.|++++|++++ .+|..+.
T Consensus 336 ~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~ 395 (461)
T 1z7x_W 336 VLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLL 395 (461)
T ss_dssp HHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHH
T ss_pred HHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHH
Confidence 7788899999999999998665555543 6789999999999986 5665543
No 397
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.68 E-value=2.9e-09 Score=105.12 Aligned_cols=80 Identities=28% Similarity=0.348 Sum_probs=67.8
Q ss_pred cCCcccceeeeccCCCCC--CCCcccCCccccceEecccccccCCCCchhhccc--cccceeeccccccCCch-------
Q 006907 106 GNLTHLRTMLLHNNQLSG--PIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLT--HLTYLRLNNNKLSGQIP------- 174 (626)
Q Consensus 106 ~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~--~L~~L~l~~N~l~~~~p------- 174 (626)
.++++|++|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+++.+|
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 568999999999999998 4567788999999999999999964 4466666 99999999999998766
Q ss_pred hhhhcCCCCcccc
Q 006907 175 TLVANLTSLSFLD 187 (626)
Q Consensus 175 ~~~~~l~~L~~L~ 187 (626)
..+..+++|+.||
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 3477889999887
No 398
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.65 E-value=2.6e-09 Score=111.68 Aligned_cols=112 Identities=21% Similarity=0.193 Sum_probs=81.8
Q ss_pred CcEEEEEeCCCCCcccCCccc-cCCcccceeeeccCCCCCCCCccc-----CCccccceEecccccccC----CCCchhh
Q 006907 85 GFVVSLEMASMGLSGTLSPSI-GNLTHLRTMLLHNNQLSGPIPVEF-----GMLSELQTLDLSNNQLVG----EIPSSLG 154 (626)
Q Consensus 85 ~~v~~l~L~~~~l~~~~~~~~-~~l~~L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L~L~~N~l~g----~~p~~~~ 154 (626)
..++.|+|++|.|+..-...+ ..+++|++|+|++|+|+..-...+ ...++|+.|+|++|.|+. .++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 468999999998875433333 356788999999998875433333 245789999999998874 2445567
Q ss_pred ccccccceeeccccccCC----chhhhhcCCCCccccCCCCCCCCC
Q 006907 155 FLTHLTYLRLNNNKLSGQ----IPTLVANLTSLSFLDLSFNNLSGP 196 (626)
Q Consensus 155 ~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~ 196 (626)
.+++|++|+|++|.|++. ++..+...++|+.|+|++|.|+..
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~ 226 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDT 226 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHH
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHH
Confidence 788899999999988742 356677778899999999988753
No 399
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.54 E-value=6.8e-09 Score=108.48 Aligned_cols=110 Identities=23% Similarity=0.208 Sum_probs=66.0
Q ss_pred cEEEEEeCCCCCcccCCccccCC-----cccceeeeccCCCCCCCCccc-CCccccceEecccccccCCCCchhh-----
Q 006907 86 FVVSLEMASMGLSGTLSPSIGNL-----THLRTMLLHNNQLSGPIPVEF-GMLSELQTLDLSNNQLVGEIPSSLG----- 154 (626)
Q Consensus 86 ~v~~l~L~~~~l~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~g~~p~~~~----- 154 (626)
.++.|+|++|.|+......+..+ ++|++|+|++|.|+..-...+ ..+++|+.|+|++|.|+..-...+.
T Consensus 73 ~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~ 152 (372)
T 3un9_A 73 SLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLH 152 (372)
T ss_dssp TCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHS
T ss_pred hCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHh
Confidence 46777777777765433333322 577777777777764322222 2356677777777777643333332
Q ss_pred ccccccceeeccccccC----CchhhhhcCCCCccccCCCCCCCC
Q 006907 155 FLTHLTYLRLNNNKLSG----QIPTLVANLTSLSFLDLSFNNLSG 195 (626)
Q Consensus 155 ~l~~L~~L~l~~N~l~~----~~p~~~~~l~~L~~L~l~~N~l~~ 195 (626)
..++|+.|+|++|.|+. .++..+..+++|++|+|++|.|+.
T Consensus 153 ~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~ 197 (372)
T 3un9_A 153 DQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGD 197 (372)
T ss_dssp TTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHH
T ss_pred cCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCc
Confidence 24567777777777763 234445667777777777777764
No 400
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.53 E-value=5.2e-07 Score=92.11 Aligned_cols=137 Identities=18% Similarity=0.149 Sum_probs=100.8
Q ss_pred CCCcCceeccCCCceEEEEEeCCccEEEEEEecCCCcccHHHHHHHHHHHHhccC----CcccceeeeeecCCceEEEEe
Q 006907 304 NFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALH----RNLLRLYGFCMTPEERLLVYP 379 (626)
Q Consensus 304 ~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~nIv~l~~~~~~~~~~~lv~E 379 (626)
.....+.++.|....||+. +..+++|+.... .....+..|.++++.+.+ ..+.+++++ +..++|||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme 107 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMK 107 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEe
Confidence 4556778999999999997 455888876432 223458899999888865 223445554 56789999
Q ss_pred ecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC-----------------------------------
Q 006907 380 YMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCN----------------------------------- 424 (626)
Q Consensus 380 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~----------------------------------- 424 (626)
|++|.++...... .++...+..++.++++.+..||+...
T Consensus 108 ~i~G~~l~~~~~~------~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (320)
T 3r70_A 108 YIKGERITYEQYH------KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLL 181 (320)
T ss_dssp CCCCBCCCHHHHT------TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCC
T ss_pred ecCCccccccccc------cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccc
Confidence 9999988743321 25667777888888888888885421
Q ss_pred -------------------------CCeEecCCCCCcEEeCCCCcEEEeeccCcccc
Q 006907 425 -------------------------PKIIHRDVKAANILLDESFEAVVGDFGLAKLL 456 (626)
Q Consensus 425 -------------------------~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~ 456 (626)
+.++|+|++|.||+++++..+.|+||+.+...
T Consensus 182 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 182 TDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp CHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred cccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 23599999999999998766799999998653
No 401
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.43 E-value=1.9e-06 Score=86.46 Aligned_cols=142 Identities=20% Similarity=0.184 Sum_probs=94.1
Q ss_pred cCceeccCCCceEEEEEeCCccEEEEEEecCCCcccHHHHHHHHHHHHhccCC---cccceeeeeecCCceEEEEeecCC
Q 006907 307 PKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHR---NLLRLYGFCMTPEERLLVYPYMPN 383 (626)
Q Consensus 307 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---nIv~l~~~~~~~~~~~lv~E~~~~ 383 (626)
..+.|+.|.++.||++...+|..+++|+...........+..|++.++.+.+. .+.+++++. ..++||||+++
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g 94 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEeccc
Confidence 35679999999999998888989999997543333345789999999999865 577777763 46999999999
Q ss_pred CChH--------H---HHhhccCCC-----------------CCCCHHHHHH---H-----------------HHHHHHH
Q 006907 384 GSVA--------D---CLRDTRQAK-----------------PPLDWNRRMH---I-----------------ALGTARG 415 (626)
Q Consensus 384 gsL~--------~---~l~~~~~~~-----------------~~l~~~~~~~---i-----------------~~~i~~~ 415 (626)
+++. . .++...... ..-+|..... + ...+-+.
T Consensus 95 ~~~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~~~~~~~l 174 (288)
T 3d1u_A 95 RPPTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVRLVEKV 174 (288)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 8743 1 123221110 0124543221 0 1111122
Q ss_pred HHHHH----hcCCCCeEecCCCCCcEEeCCCCcEEEeeccCcc
Q 006907 416 LLYLH----EQCNPKIIHRDVKAANILLDESFEAVVGDFGLAK 454 (626)
Q Consensus 416 l~yLH----~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~ 454 (626)
+..+. ....+.++|+|+.+.||+++.+ .+.|.|| .+.
T Consensus 175 ~~~l~~~l~~~~~~~l~HgD~~~~N~l~~~~-~~~~iD~-~~~ 215 (288)
T 3d1u_A 175 LDALDHLAGDPEPPARIHGDLWNGNVLWQDD-GAVVIDP-AAH 215 (288)
T ss_dssp HHTHHHHTCSCCCCEEECSCCSGGGEEEETT-EEEECSC-CCE
T ss_pred HHHHHHHhcCCCCCcceECCCCcCcEEEeCC-CeEEEcC-CcC
Confidence 23332 2235689999999999999884 5889999 654
No 402
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.43 E-value=1.9e-08 Score=94.22 Aligned_cols=110 Identities=15% Similarity=0.251 Sum_probs=87.3
Q ss_pred CcEEEEEeCCC-CCcc----cCCccccCCcccceeeeccCCCCCC----CCcccCCccccceEecccccccCC----CCc
Q 006907 85 GFVVSLEMASM-GLSG----TLSPSIGNLTHLRTMLLHNNQLSGP----IPVEFGMLSELQTLDLSNNQLVGE----IPS 151 (626)
Q Consensus 85 ~~v~~l~L~~~-~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~g~----~p~ 151 (626)
..+++|+|++| .|.. .+...+...++|++|+|++|.|... +...+...++|++|+|++|.|+.. +..
T Consensus 36 ~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~ 115 (185)
T 1io0_A 36 PDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVE 115 (185)
T ss_dssp TTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHH
T ss_pred CCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHH
Confidence 46899999999 8874 2555677789999999999999742 344556668999999999999843 456
Q ss_pred hhhccccccceee--ccccccCC----chhhhhcCCCCccccCCCCCCC
Q 006907 152 SLGFLTHLTYLRL--NNNKLSGQ----IPTLVANLTSLSFLDLSFNNLS 194 (626)
Q Consensus 152 ~~~~l~~L~~L~l--~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~ 194 (626)
.+...++|++|+| ++|.|... +...+...++|+.|+|++|.+.
T Consensus 116 ~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 116 ALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp GGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 6777889999999 88999854 4455667789999999999875
No 403
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.41 E-value=1.8e-07 Score=96.04 Aligned_cols=92 Identities=11% Similarity=0.083 Sum_probs=45.4
Q ss_pred CcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhcccccc-ceeeccccccCCchhhhhcCCCCccc
Q 006907 108 LTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLT-YLRLNNNKLSGQIPTLVANLTSLSFL 186 (626)
Q Consensus 108 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~-~L~l~~N~l~~~~p~~~~~l~~L~~L 186 (626)
+++|++|+|++|+++..-+..|.++++|+.|+|++| ++..-+..|.+|++|+ .|+|.+ +++..-+.+|.++++|+.|
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 455555555555555332334555555555555555 4433334455555555 555555 4442333455555555555
Q ss_pred cCCCCCCCCCCCccc
Q 006907 187 DLSFNNLSGPTPKVL 201 (626)
Q Consensus 187 ~l~~N~l~~~~p~~~ 201 (626)
++++|+++...+..|
T Consensus 303 ~l~~n~i~~I~~~aF 317 (329)
T 3sb4_A 303 LATGDKITTLGDELF 317 (329)
T ss_dssp EECSSCCCEECTTTT
T ss_pred EeCCCccCccchhhh
Confidence 555555554444333
No 404
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.39 E-value=3.2e-07 Score=94.07 Aligned_cols=116 Identities=12% Similarity=0.152 Sum_probs=90.4
Q ss_pred CcEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccC----------------------------------
Q 006907 85 GFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFG---------------------------------- 130 (626)
Q Consensus 85 ~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~---------------------------------- 130 (626)
..++.|+|.+ +++..-+.+|.++++|+.|+|++|.+...-+..|.
T Consensus 101 ~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~ 179 (329)
T 3sb4_A 101 QTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLE 179 (329)
T ss_dssp TTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCE
T ss_pred CCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccc
Confidence 3588899998 88877778899999999999999986311111110
Q ss_pred --------------------------------------------CccccceEecccccccCCCCchhhccccccceeecc
Q 006907 131 --------------------------------------------MLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRLNN 166 (626)
Q Consensus 131 --------------------------------------------~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~ 166 (626)
.+++|+.|+|++|+++..-+..|.+|++|+.|+|.+
T Consensus 180 ~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~ 259 (329)
T 3sb4_A 180 TTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPH 259 (329)
T ss_dssp EEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCT
T ss_pred eeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCc
Confidence 267999999999999965666799999999999999
Q ss_pred ccccCCchhhhhcCCCCc-cccCCCCCCCCCCCccccC
Q 006907 167 NKLSGQIPTLVANLTSLS-FLDLSFNNLSGPTPKVLAN 203 (626)
Q Consensus 167 N~l~~~~p~~~~~l~~L~-~L~l~~N~l~~~~p~~~~~ 203 (626)
| ++..-+.+|.++++|+ .|++.+ .++...+..|.+
T Consensus 260 n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~ 295 (329)
T 3sb4_A 260 N-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMG 295 (329)
T ss_dssp T-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTT
T ss_pred c-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhC
Confidence 8 7755567899999999 999998 677655666654
No 405
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.33 E-value=4.3e-08 Score=108.98 Aligned_cols=110 Identities=14% Similarity=0.085 Sum_probs=65.1
Q ss_pred cEEEEEeCCCCCcccCCccccC-Ccccceeeec----cCCCCCC-----CCcccCCccccceEecccc--cccCCCCchh
Q 006907 86 FVVSLEMASMGLSGTLSPSIGN-LTHLRTMLLH----NNQLSGP-----IPVEFGMLSELQTLDLSNN--QLVGEIPSSL 153 (626)
Q Consensus 86 ~v~~l~L~~~~l~~~~~~~~~~-l~~L~~L~L~----~N~l~~~-----~p~~~~~l~~L~~L~L~~N--~l~g~~p~~~ 153 (626)
+++.|+|..|++++..+..++. +++|+.|+|+ .|++++. ++..+.++++|+.|+|+++ .+++..+..+
T Consensus 379 ~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~ 458 (592)
T 3ogk_B 379 ELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYI 458 (592)
T ss_dssp TCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHH
T ss_pred cCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHH
Confidence 5777777777777665555554 7777777775 5666643 2333555666666666532 3444444444
Q ss_pred hc-cccccceeeccccccC-CchhhhhcCCCCccccCCCCCCCC
Q 006907 154 GF-LTHLTYLRLNNNKLSG-QIPTLVANLTSLSFLDLSFNNLSG 195 (626)
Q Consensus 154 ~~-l~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~ 195 (626)
.. +++|+.|+|++|++++ .++..+..+++|+.|++++|++++
T Consensus 459 ~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~ 502 (592)
T 3ogk_B 459 GQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSE 502 (592)
T ss_dssp HHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBH
T ss_pred HHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcH
Confidence 33 5666666666666654 234445566666666666666543
No 406
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.32 E-value=3e-06 Score=84.03 Aligned_cols=135 Identities=19% Similarity=0.161 Sum_probs=97.4
Q ss_pred eeccCCCc-eEEEEEeC-CccEEEEEEecCCCcccHHHHHHHHHHHHhcc-CCcccceeeeeecCCceEEEEeecCCCCh
Q 006907 310 ILGQGGYG-VVYKGCLP-NRMVVAVKRLKDPNFTGEVQFQTEVEMIGLAL-HRNLLRLYGFCMTPEERLLVYPYMPNGSV 386 (626)
Q Consensus 310 ~lG~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lv~E~~~~gsL 386 (626)
.+..|..| .||+.... ++..+++|+-.. .....+..|.+.++.+. +-.+.++++++.+++..++|||+++|.++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~---~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~ 107 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKG---SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA 107 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEET---HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCC---CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence 45566666 58987654 456788888653 23446788999988774 44467888999988999999999999888
Q ss_pred HHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-------------------------------------------
Q 006907 387 ADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQC------------------------------------------- 423 (626)
Q Consensus 387 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~------------------------------------------- 423 (626)
.+..... ......+..+++..|..||...
T Consensus 108 ~~~~~~~--------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (272)
T 4gkh_A 108 FQVLEEY--------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQV 179 (272)
T ss_dssp HHHHHHC--------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHH
T ss_pred cccccCC--------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHH
Confidence 7765421 1223456666777777777421
Q ss_pred ------------CCCeEecCCCCCcEEeCCCCcEEEeeccCccc
Q 006907 424 ------------NPKIIHRDVKAANILLDESFEAVVGDFGLAKL 455 (626)
Q Consensus 424 ------------~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~ 455 (626)
.+.++|+|+.+.||++++++.+-|+||+.+..
T Consensus 180 ~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 180 WKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 12378999999999999877777999998764
No 407
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.27 E-value=4.5e-06 Score=84.57 Aligned_cols=136 Identities=17% Similarity=0.145 Sum_probs=93.8
Q ss_pred CceeccCCCceEEEEEeCCccEEEEEEecCCCcccHHHHHHHHHHHHhccCC---cccceeeeee-cCCceEEEEeecCC
Q 006907 308 KNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHR---NLLRLYGFCM-TPEERLLVYPYMPN 383 (626)
Q Consensus 308 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---nIv~l~~~~~-~~~~~~lv~E~~~~ 383 (626)
.+.++.|....||+. +..+++|+-.. ......+..|.++++.+.+. .+.+++.+.. ..+..++||||++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 456888888899987 34578887432 12345688999999988742 3556666664 44567899999999
Q ss_pred CChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhc-----------------------------------------
Q 006907 384 GSVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQ----------------------------------------- 422 (626)
Q Consensus 384 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~----------------------------------------- 422 (626)
.++.+.... .++...+..++.++++.|..||+.
T Consensus 98 ~~l~~~~~~------~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~ 171 (306)
T 3tdw_A 98 QILGEDGMA------VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDY 171 (306)
T ss_dssp EECHHHHHT------TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHH
T ss_pred eECchhhhh------hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHH
Confidence 888763211 134455555555666666555542
Q ss_pred ----------------CCCCeEecCCCCCcEEeCC---CCc-EEEeeccCccc
Q 006907 423 ----------------CNPKIIHRDVKAANILLDE---SFE-AVVGDFGLAKL 455 (626)
Q Consensus 423 ----------------~~~~ivH~Dlkp~NILl~~---~~~-~ki~DfG~a~~ 455 (626)
..+.++|+|+++.||+++. ++. +.|+||+.+..
T Consensus 172 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 172 LTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2335799999999999987 455 48999998864
No 408
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.21 E-value=1.5e-07 Score=104.51 Aligned_cols=105 Identities=9% Similarity=0.105 Sum_probs=75.9
Q ss_pred cEEEEEeCCCC-Ccc-cCCccccCCcccceeeeccCCCCCC----CCcccCCccccceEecccccccC----CCCchhhc
Q 006907 86 FVVSLEMASMG-LSG-TLSPSIGNLTHLRTMLLHNNQLSGP----IPVEFGMLSELQTLDLSNNQLVG----EIPSSLGF 155 (626)
Q Consensus 86 ~v~~l~L~~~~-l~~-~~~~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~g----~~p~~~~~ 155 (626)
+++.|+|+++. ++. .++....++++|++|+|++|.+++. ++..+.++++|+.|+|++|.+++ .++..+.+
T Consensus 139 ~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~ 218 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARN 218 (592)
T ss_dssp GCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHH
T ss_pred cCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhh
Confidence 38888888876 221 1223334778888888888888765 44455677888888888888873 34455667
Q ss_pred cccccceeeccccccCCchhhhhcCCCCccccCCCC
Q 006907 156 LTHLTYLRLNNNKLSGQIPTLVANLTSLSFLDLSFN 191 (626)
Q Consensus 156 l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N 191 (626)
+++|+.|+|++|.+.+ +|..+.++++|+.|+++++
T Consensus 219 ~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~ 253 (592)
T 3ogk_B 219 CRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSL 253 (592)
T ss_dssp CTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBC
T ss_pred CCCCcEEeccCccHHH-HHHHHhhhhHHHhhccccc
Confidence 8888888888888884 7778888888888888753
No 409
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.15 E-value=4.1e-06 Score=86.75 Aligned_cols=79 Identities=9% Similarity=-0.016 Sum_probs=54.6
Q ss_pred cee-ccCCCceEEEEEeC-------CccEEEEEEecCCC---cccHHHHHHHHHHHHhcc-C--CcccceeeeeecC---
Q 006907 309 NIL-GQGGYGVVYKGCLP-------NRMVVAVKRLKDPN---FTGEVQFQTEVEMIGLAL-H--RNLLRLYGFCMTP--- 371 (626)
Q Consensus 309 ~~l-G~G~~g~Vy~~~~~-------~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h--~nIv~l~~~~~~~--- 371 (626)
+.| +.|....+|+.... ++..+++|+..... ......+..|+++++.+. + -.+.++++++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 567 78888999987654 25678888764322 111245788888888775 3 3567788877655
Q ss_pred CceEEEEeecCCCChH
Q 006907 372 EERLLVYPYMPNGSVA 387 (626)
Q Consensus 372 ~~~~lv~E~~~~gsL~ 387 (626)
+..++||||++|.++.
T Consensus 106 g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPP 121 (357)
T ss_dssp SSCEEEEECCCCBCCC
T ss_pred CCceEEEEecCCCChh
Confidence 3568999999987654
No 410
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.13 E-value=1e-05 Score=83.87 Aligned_cols=144 Identities=10% Similarity=0.060 Sum_probs=89.4
Q ss_pred cCceeccCCCceEEEEEeCCccEEEEEEecCCCcccHHHHHHHHHHHHhccCCc--ccceeeeeecC-CceEEEEeecCC
Q 006907 307 PKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRN--LLRLYGFCMTP-EERLLVYPYMPN 383 (626)
Q Consensus 307 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--Iv~l~~~~~~~-~~~~lv~E~~~~ 383 (626)
..+.++.|....+|+... ++..+++|..... ..+..|..+++.+.... +.++++++... +..++||||++|
T Consensus 45 ~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G 118 (362)
T 3ovc_A 45 DLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQG 118 (362)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCS
T ss_pred eEEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCC
Confidence 356789999999999876 4667888887532 25788999998886433 55677776654 568999999997
Q ss_pred CChHH---------------H---HhhccCCC-C------------CCCHHHHH---------------------HHHHH
Q 006907 384 GSVAD---------------C---LRDTRQAK-P------------PLDWNRRM---------------------HIALG 411 (626)
Q Consensus 384 gsL~~---------------~---l~~~~~~~-~------------~l~~~~~~---------------------~i~~~ 411 (626)
.++.+ . |+...... . .-.|.... .....
T Consensus 119 ~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 198 (362)
T 3ovc_A 119 VTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQA 198 (362)
T ss_dssp EETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHHHH
T ss_pred CCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccchHH
Confidence 65532 1 11110000 0 00111110 11111
Q ss_pred HHHHHHHHHhc-CCCCeEecCCCCCcEEeCCCCcEEEeeccCcccc
Q 006907 412 TARGLLYLHEQ-CNPKIIHRDVKAANILLDESFEAVVGDFGLAKLL 456 (626)
Q Consensus 412 i~~~l~yLH~~-~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~ 456 (626)
+...+.++... ..+.++|+|+.+.||++++++.+.|+||+.+..-
T Consensus 199 ~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 199 LDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp HHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 22222233211 1256899999999999988777889999988653
No 411
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=98.06 E-value=4.2e-05 Score=78.27 Aligned_cols=141 Identities=16% Similarity=0.177 Sum_probs=81.3
Q ss_pred ceeccCCCceEEEEEeCCccEEEEEEecCCCcccHHHHHHHHHHHHhccC--Ccccceee------eeecCCceEEEEee
Q 006907 309 NILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALH--RNLLRLYG------FCMTPEERLLVYPY 380 (626)
Q Consensus 309 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~nIv~l~~------~~~~~~~~~lv~E~ 380 (626)
+.|+.|..+.||+....++. +++|+.... ......|.++++.+.. -.+.+++. +....+..+++|||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~~-~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSGA-VCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp EECC----CEEEEEEETTEE-EEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eeccccccCcEEEEEeCCCC-EEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 45666778999998876665 889988752 2334455666655531 12344443 11245667899999
Q ss_pred cCCCChH--------------HHHhhccCCC----------CCCCHHHHH------------------------------
Q 006907 381 MPNGSVA--------------DCLRDTRQAK----------PPLDWNRRM------------------------------ 406 (626)
Q Consensus 381 ~~~gsL~--------------~~l~~~~~~~----------~~l~~~~~~------------------------------ 406 (626)
++|.++. ..++...... ..-.|....
T Consensus 113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
T 2q83_A 113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI 192 (346)
T ss_dssp CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 9986542 1122111100 012342211
Q ss_pred -HHHHHHHHHHHHHHh----------cCCCCeEecCCCCCcEEeCCCCcEEEeeccCcc
Q 006907 407 -HIALGTARGLLYLHE----------QCNPKIIHRDVKAANILLDESFEAVVGDFGLAK 454 (626)
Q Consensus 407 -~i~~~i~~~l~yLH~----------~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~ 454 (626)
.+...+..++.+|+. ...+.++|+|+++.||+++.++.+.|+||+.+.
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 111223445666663 124589999999999999888899999999875
No 412
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.98 E-value=4.2e-07 Score=100.91 Aligned_cols=112 Identities=15% Similarity=0.086 Sum_probs=77.5
Q ss_pred CcEEEEEeCCCCCcccCCcccc-CCcccceeeec--c----CCCCCC-----CCcccCCccccceEecccccccCCCCch
Q 006907 85 GFVVSLEMASMGLSGTLSPSIG-NLTHLRTMLLH--N----NQLSGP-----IPVEFGMLSELQTLDLSNNQLVGEIPSS 152 (626)
Q Consensus 85 ~~v~~l~L~~~~l~~~~~~~~~-~l~~L~~L~L~--~----N~l~~~-----~p~~~~~l~~L~~L~L~~N~l~g~~p~~ 152 (626)
.+++.|++..|++++.....+. .+++|+.|+|+ + |.+++. ++..+.++++|+.|+|++ .+++..+..
T Consensus 372 ~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~ 450 (594)
T 2p1m_B 372 PKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEY 450 (594)
T ss_dssp TTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHH
T ss_pred hhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHH
Confidence 3577788888888876555555 58888888888 4 556521 111256678888888876 566555555
Q ss_pred hhc-cccccceeeccccccCCchhhh-hcCCCCccccCCCCCCCCCC
Q 006907 153 LGF-LTHLTYLRLNNNKLSGQIPTLV-ANLTSLSFLDLSFNNLSGPT 197 (626)
Q Consensus 153 ~~~-l~~L~~L~l~~N~l~~~~p~~~-~~l~~L~~L~l~~N~l~~~~ 197 (626)
+.. +++|+.|+|++|.+++..+..+ ..+++|+.|+|++|++++..
T Consensus 451 l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~ 497 (594)
T 2p1m_B 451 IGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKA 497 (594)
T ss_dssp HHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHH
T ss_pred HHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHH
Confidence 554 7788888888888876555444 66788888888888885443
No 413
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=97.97 E-value=1.3e-06 Score=81.50 Aligned_cols=97 Identities=19% Similarity=0.184 Sum_probs=77.6
Q ss_pred cCCccccCCcccceeeeccC-CCCCC----CCcccCCccccceEecccccccCC----CCchhhccccccceeecccccc
Q 006907 100 TLSPSIGNLTHLRTMLLHNN-QLSGP----IPVEFGMLSELQTLDLSNNQLVGE----IPSSLGFLTHLTYLRLNNNKLS 170 (626)
Q Consensus 100 ~~~~~~~~l~~L~~L~L~~N-~l~~~----~p~~~~~l~~L~~L~L~~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~ 170 (626)
.+...+...++|++|+|++| .|... +...+...++|++|+|++|.|... +...+...++|++|+|++|.|.
T Consensus 27 ~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~ 106 (185)
T 1io0_A 27 TLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 106 (185)
T ss_dssp HHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred HHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCC
Confidence 44556778899999999999 88742 445567789999999999999732 3445666789999999999998
Q ss_pred CC----chhhhhcCCCCccccC--CCCCCCCC
Q 006907 171 GQ----IPTLVANLTSLSFLDL--SFNNLSGP 196 (626)
Q Consensus 171 ~~----~p~~~~~l~~L~~L~l--~~N~l~~~ 196 (626)
.. +...+...++|+.|+| ++|.|...
T Consensus 107 ~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~ 138 (185)
T 1io0_A 107 GSGILALVEALQSNTSLIELRIDNQSQPLGNN 138 (185)
T ss_dssp HHHHHHHHHGGGGCSSCCEEECCCCSSCCCHH
T ss_pred HHHHHHHHHHHHhCCCceEEEecCCCCCCCHH
Confidence 53 4567788889999999 88998754
No 414
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.94 E-value=1.6e-06 Score=89.89 Aligned_cols=109 Identities=14% Similarity=0.186 Sum_probs=71.2
Q ss_pred CCcEEEEEeCCCC-CcccCCccccCCcccceeeeccCCCCCCCCcccC--CccccceEeccc--ccccCC-----CCchh
Q 006907 84 EGFVVSLEMASMG-LSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFG--MLSELQTLDLSN--NQLVGE-----IPSSL 153 (626)
Q Consensus 84 ~~~v~~l~L~~~~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~L~~--N~l~g~-----~p~~~ 153 (626)
...++.|+|++|. + .+++ + .+++|+.|+|..|.++......+. .+++|+.|+|+. |...|. +...+
T Consensus 171 ~P~L~~L~L~g~~~l--~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l 246 (362)
T 2ra8_A 171 MPLLNNLKIKGTNNL--SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLF 246 (362)
T ss_dssp CTTCCEEEEECCBTC--BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGS
T ss_pred CCCCcEEEEeCCCCc--eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHH
Confidence 3578999998773 2 2333 3 378899999988887643333343 678888888863 222211 11122
Q ss_pred --hccccccceeeccccccCCchhhhh---cCCCCccccCCCCCCCCC
Q 006907 154 --GFLTHLTYLRLNNNKLSGQIPTLVA---NLTSLSFLDLSFNNLSGP 196 (626)
Q Consensus 154 --~~l~~L~~L~l~~N~l~~~~p~~~~---~l~~L~~L~l~~N~l~~~ 196 (626)
..+++|+.|+|.+|.+.+..+..+. .+++|+.|+|+.|.|.+.
T Consensus 247 ~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~ 294 (362)
T 2ra8_A 247 SKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDE 294 (362)
T ss_dssp CTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHH
T ss_pred hcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChH
Confidence 2468888999988888755444443 477888899988888764
No 415
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.80 E-value=2.6e-06 Score=94.41 Aligned_cols=107 Identities=17% Similarity=0.194 Sum_probs=69.1
Q ss_pred CcEEEEEeCCCCCcccCCcccc-CCcccceeeeccC-CCCCC-CCcccCCccccceEecccccccCCCCchhh----ccc
Q 006907 85 GFVVSLEMASMGLSGTLSPSIG-NLTHLRTMLLHNN-QLSGP-IPVEFGMLSELQTLDLSNNQLVGEIPSSLG----FLT 157 (626)
Q Consensus 85 ~~v~~l~L~~~~l~~~~~~~~~-~l~~L~~L~L~~N-~l~~~-~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~----~l~ 157 (626)
.++++|+|++|.+++..+..+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+. .++
T Consensus 105 ~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~ 184 (594)
T 2p1m_B 105 TWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYT 184 (594)
T ss_dssp TTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCC
T ss_pred CCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCC
Confidence 3577788888777766665564 5778888888777 44432 344444677888888888877765544443 455
Q ss_pred cccceeecccc--ccC-CchhhhhcCCCCccccCCCC
Q 006907 158 HLTYLRLNNNK--LSG-QIPTLVANLTSLSFLDLSFN 191 (626)
Q Consensus 158 ~L~~L~l~~N~--l~~-~~p~~~~~l~~L~~L~l~~N 191 (626)
+|+.|+|++|. ++. .++..+.++++|+.|++++|
T Consensus 185 ~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~ 221 (594)
T 2p1m_B 185 SLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRA 221 (594)
T ss_dssp CCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTT
T ss_pred cCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCC
Confidence 78888887776 221 12223345677888888777
No 416
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.80 E-value=9.5e-05 Score=77.58 Aligned_cols=75 Identities=11% Similarity=0.010 Sum_probs=48.9
Q ss_pred CceeccCCCceEEEEEeC-CccEEEEEEecCCCc-------ccHHHHHHHHHHHHhccC--Cc-ccceeeeeecCCceEE
Q 006907 308 KNILGQGGYGVVYKGCLP-NRMVVAVKRLKDPNF-------TGEVQFQTEVEMIGLALH--RN-LLRLYGFCMTPEERLL 376 (626)
Q Consensus 308 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~h--~n-Iv~l~~~~~~~~~~~l 376 (626)
.+.+|.|.++.||++... ++..+++|....... .....+..|.++++.+.. +. +.+++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 467999999999999754 467799998653211 122346778888887742 33 3345543 3456789
Q ss_pred EEeecCCC
Q 006907 377 VYPYMPNG 384 (626)
Q Consensus 377 v~E~~~~g 384 (626)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999764
No 417
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.77 E-value=0.00012 Score=73.14 Aligned_cols=78 Identities=15% Similarity=0.161 Sum_probs=57.1
Q ss_pred CCCcCceeccCCCceEEEEEeCCccEEEEEEecCCCcccHHHHHHHHHHHHhccC---CcccceeeeeecCCceEEEEee
Q 006907 304 NFSPKNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALH---RNLLRLYGFCMTPEERLLVYPY 380 (626)
Q Consensus 304 ~f~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h---~nIv~l~~~~~~~~~~~lv~E~ 380 (626)
.....+.+|.|..+.||+....+|+.|++|+-..........|..|.+.|+.+.- -.+.+++++ +..++||||
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~----~~~~lv~e~ 91 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW----DDRTLAMEW 91 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE----ETTEEEEEC
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec----cCceEEEEe
Confidence 3445677899999999999999999999998765444444467889999887742 234455544 234789999
Q ss_pred cCCCC
Q 006907 381 MPNGS 385 (626)
Q Consensus 381 ~~~gs 385 (626)
++++.
T Consensus 92 l~~~~ 96 (288)
T 3f7w_A 92 VDERP 96 (288)
T ss_dssp CCCCC
T ss_pred ecccC
Confidence 98764
No 418
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=97.74 E-value=2.8e-05 Score=81.79 Aligned_cols=102 Identities=14% Similarity=0.101 Sum_probs=51.0
Q ss_pred cEEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEeccccccc-----CCCCchhhcccccc
Q 006907 86 FVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLV-----GEIPSSLGFLTHLT 160 (626)
Q Consensus 86 ~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-----g~~p~~~~~l~~L~ 160 (626)
.++.|+|.++ ++..-...|.+ .+|+.+.| .|+++..-+..|.++++|+.++|.+|.+. ..-+..|.+|++|+
T Consensus 227 ~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~ 303 (401)
T 4fdw_A 227 QLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLA 303 (401)
T ss_dssp TCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCC
T ss_pred CCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCC
Confidence 3555555542 44333444544 55566655 33344333445555666666666555543 22334455555666
Q ss_pred ceeeccccccCCchhhhhcCCCCccccCCCC
Q 006907 161 YLRLNNNKLSGQIPTLVANLTSLSFLDLSFN 191 (626)
Q Consensus 161 ~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N 191 (626)
.++|. |.++..-..+|.++++|+.|+|..|
T Consensus 304 ~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~ 333 (401)
T 4fdw_A 304 RFEIP-ESIRILGQGLLGGNRKVTQLTIPAN 333 (401)
T ss_dssp EECCC-TTCCEECTTTTTTCCSCCEEEECTT
T ss_pred eEEeC-CceEEEhhhhhcCCCCccEEEECcc
Confidence 66555 2344223345555555555555433
No 419
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.71 E-value=6.2e-05 Score=79.70 Aligned_cols=80 Identities=11% Similarity=-0.007 Sum_probs=49.0
Q ss_pred CCCeEecCCCCCcEEeCCCCcEEEeeccCccccCCCCCceeeeecccCCccCccccccC---CCCccchhHHHHHHHHHH
Q 006907 424 NPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTG---QSSEKTDVFGFGVLLLEL 500 (626)
Q Consensus 424 ~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~t~~~DvwSlGvil~el 500 (626)
.+.++|+|++|.||++++++ ++|+||+.+..-.+...-......-...|.+|+..... ......++......+|+.
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNL 309 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHH
Confidence 44899999999999998876 99999998875332110000000012345666655321 112235566888888888
Q ss_pred HhCC
Q 006907 501 ITGQ 504 (626)
Q Consensus 501 ltg~ 504 (626)
+.++
T Consensus 310 y~~~ 313 (420)
T 2pyw_A 310 FNKR 313 (420)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7753
No 420
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.64 E-value=1.6e-05 Score=72.82 Aligned_cols=83 Identities=10% Similarity=0.045 Sum_probs=42.8
Q ss_pred ccceeeeccCCCCCCCCcccCCccccceEeccccc-ccCCCCchhhcc----ccccceeecccc-ccCCchhhhhcCCCC
Q 006907 110 HLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQ-LVGEIPSSLGFL----THLTYLRLNNNK-LSGQIPTLVANLTSL 183 (626)
Q Consensus 110 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~g~~p~~~~~l----~~L~~L~l~~N~-l~~~~p~~~~~l~~L 183 (626)
+|+.|||+++.++..--..+.++++|+.|+|+++. ++..-=..+..+ ++|++|+|+++. ++..--..+.++++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 45666666655554333345556666666666663 442111122322 346666666653 553323345566666
Q ss_pred ccccCCCCC
Q 006907 184 SFLDLSFNN 192 (626)
Q Consensus 184 ~~L~l~~N~ 192 (626)
+.|+|++++
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 666666653
No 421
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.61 E-value=0.00029 Score=71.15 Aligned_cols=139 Identities=17% Similarity=0.159 Sum_probs=91.7
Q ss_pred CceeccCCCceEEEEEeCCccEEEEEEecCCCcccHHHHHHHHHHHHhcc---CCcccceeeeeecCCceEEEEeecCCC
Q 006907 308 KNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLAL---HRNLLRLYGFCMTPEERLLVYPYMPNG 384 (626)
Q Consensus 308 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~nIv~l~~~~~~~~~~~lv~E~~~~g 384 (626)
.+.|+.|.+..+|+.... +..+++|+.... ....+..|.+.++.+. ...+.+++++....+..++||||+++.
T Consensus 41 ~~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~ 116 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLINDE-VQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS 116 (312)
T ss_dssp EEEECCSSSSEEEEEESS-SCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred eEEeCCccceeeeEEEEC-CCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence 467899999999998764 556888886532 2456888999888774 366888888888888899999999987
Q ss_pred ChH--------H---HHhhccC-CC-----------------CCCCHHHHHH---HHHH----------------HHHH-
Q 006907 385 SVA--------D---CLRDTRQ-AK-----------------PPLDWNRRMH---IALG----------------TARG- 415 (626)
Q Consensus 385 sL~--------~---~l~~~~~-~~-----------------~~l~~~~~~~---i~~~----------------i~~~- 415 (626)
.+. . .++.... .. ..-+|..... +..+ +..-
T Consensus 117 ~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l 196 (312)
T 3jr1_A 117 KNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIV 196 (312)
T ss_dssp CCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 542 1 2232211 00 0125654321 1111 1111
Q ss_pred HHHHHh-cCCCCeEecCCCCCcEEeCCCCcEEEeecc
Q 006907 416 LLYLHE-QCNPKIIHRDVKAANILLDESFEAVVGDFG 451 (626)
Q Consensus 416 l~yLH~-~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG 451 (626)
...|.. ...|.++|+|+.+.|++++.++ +.|.|+.
T Consensus 197 ~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 197 ADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 123321 2356899999999999999887 8889973
No 422
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.43 E-value=5.5e-05 Score=78.22 Aligned_cols=110 Identities=15% Similarity=0.154 Sum_probs=66.9
Q ss_pred CcEEEEEeCCCCCc---------ccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhh-
Q 006907 85 GFVVSLEMASMGLS---------GTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLG- 154 (626)
Q Consensus 85 ~~v~~l~L~~~~l~---------~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~- 154 (626)
.+++.|.+.++... +.++..+..+++|+.|+|++|.-. .+|. + .+++|+.|+|..|.++......+.
T Consensus 139 ~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~ 215 (362)
T 2ra8_A 139 AHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSVVEDILG 215 (362)
T ss_dssp TTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHH
T ss_pred chhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHHHHHHHH
Confidence 46777777655331 234455667788888888877311 2333 3 378888888888776643333343
Q ss_pred -ccccccceeecc--ccccCC-----chhhh--hcCCCCccccCCCCCCCCCC
Q 006907 155 -FLTHLTYLRLNN--NKLSGQ-----IPTLV--ANLTSLSFLDLSFNNLSGPT 197 (626)
Q Consensus 155 -~l~~L~~L~l~~--N~l~~~-----~p~~~--~~l~~L~~L~l~~N~l~~~~ 197 (626)
.+++|+.|+|+. |...|. +...+ ..+++|+.|+|++|.+.+..
T Consensus 216 ~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~ 268 (362)
T 2ra8_A 216 SDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVV 268 (362)
T ss_dssp SBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHH
T ss_pred ccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHH
Confidence 678888888853 332221 11122 24678888888888876533
No 423
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=97.38 E-value=0.00019 Score=75.31 Aligned_cols=78 Identities=13% Similarity=0.101 Sum_probs=43.7
Q ss_pred EEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhccccccceeecc
Q 006907 87 VVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRLNN 166 (626)
Q Consensus 87 v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~ 166 (626)
++.+.|.+ +++..-+..|.++++|+.++|++|+++ .+|......++|+.+.|.+| ++..-...|.++++|+.++|..
T Consensus 159 L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~-~I~~~aF~~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~ 235 (401)
T 4fdw_A 159 VQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKIT-KLPASTFVYAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPE 235 (401)
T ss_dssp CCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCS-EECTTTTTTCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCT
T ss_pred ceEEEeCC-CccEehHHHhhCcccCCeeecCCCcce-EechhhEeecccCEEEeCCc-hheehhhHhhCCCCCCEEecCC
Confidence 55566654 555455556666777777777766666 33332222456666666533 4433344566666666666654
Q ss_pred c
Q 006907 167 N 167 (626)
Q Consensus 167 N 167 (626)
|
T Consensus 236 ~ 236 (401)
T 4fdw_A 236 N 236 (401)
T ss_dssp T
T ss_pred C
Confidence 3
No 424
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.21 E-value=0.001 Score=67.33 Aligned_cols=158 Identities=8% Similarity=0.003 Sum_probs=86.4
Q ss_pred chHHHHHHhCCCCc-----CceeccCCCceEEEEEeCCccEEEEEEecCCCcccHHHHHHHHHHHHhccCCc--ccceee
Q 006907 294 SFRELQIATGNFSP-----KNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRN--LLRLYG 366 (626)
Q Consensus 294 ~~~~~~~~~~~f~~-----~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--Iv~l~~ 366 (626)
+.+++......|.+ .+.|+.|....+|+....++ .+++|...... ....+..|++++..+.... +.+++.
T Consensus 8 ~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~~~ 84 (322)
T 2ppq_A 8 TEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPLP 84 (322)
T ss_dssp CHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCC
T ss_pred CHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCcccC
Confidence 33444444444544 24566788889999887666 47889886521 1234566777777665222 333332
Q ss_pred e------eecCCceEEEEeecCCCChHH--------------HHhhccCC-CCC-------CCHHHHHHH----------
Q 006907 367 F------CMTPEERLLVYPYMPNGSVAD--------------CLRDTRQA-KPP-------LDWNRRMHI---------- 408 (626)
Q Consensus 367 ~------~~~~~~~~lv~E~~~~gsL~~--------------~l~~~~~~-~~~-------l~~~~~~~i---------- 408 (626)
. ....+..+++++|++|..+.. .++..... ..+ ..|.....-
T Consensus 85 ~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 164 (322)
T 2ppq_A 85 RKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEK 164 (322)
T ss_dssp BTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTST
T ss_pred CCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhh
Confidence 2 112345689999998864321 12211100 000 123321110
Q ss_pred --HHHHHHHHHHHHhc----CCCCeEecCCCCCcEEeCCCCcEEEeeccCcc
Q 006907 409 --ALGTARGLLYLHEQ----CNPKIIHRDVKAANILLDESFEAVVGDFGLAK 454 (626)
Q Consensus 409 --~~~i~~~l~yLH~~----~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~ 454 (626)
...+...+++++.. ....++|+|+.+.||+++++..+.|+||+.+.
T Consensus 165 ~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 165 GLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp THHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 01234455666532 13479999999999999987556899999875
No 425
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.20 E-value=8.8e-05 Score=67.82 Aligned_cols=86 Identities=9% Similarity=0.108 Sum_probs=64.9
Q ss_pred CcEEEEEeCCCCCcccCCccccCCcccceeeeccCC-CCCCCCcccCCc----cccceEeccccc-ccCCCCchhhcccc
Q 006907 85 GFVVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQ-LSGPIPVEFGML----SELQTLDLSNNQ-LVGEIPSSLGFLTH 158 (626)
Q Consensus 85 ~~v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l----~~L~~L~L~~N~-l~g~~p~~~~~l~~ 158 (626)
-.+++|||+++.++..==..+.++++|++|+|+++. ++..--..++.+ ++|++|+|+++. ++..--..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 369999999999875433457899999999999985 774323345554 479999999984 77432345778999
Q ss_pred ccceeecccc-cc
Q 006907 159 LTYLRLNNNK-LS 170 (626)
Q Consensus 159 L~~L~l~~N~-l~ 170 (626)
|+.|+|+++. ++
T Consensus 141 L~~L~L~~c~~It 153 (176)
T 3e4g_A 141 LKYLFLSDLPGVK 153 (176)
T ss_dssp CCEEEEESCTTCC
T ss_pred CCEEECCCCCCCC
Confidence 9999999875 55
No 426
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.17 E-value=0.0017 Score=65.04 Aligned_cols=71 Identities=10% Similarity=0.042 Sum_probs=44.9
Q ss_pred CceeccCCCceEEEEEeCCccEEEEEEecCCCcccHHHHHHHHHHHHhccCCcc-cceeeeeecCCceEEEEeec-CCCC
Q 006907 308 KNILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNL-LRLYGFCMTPEERLLVYPYM-PNGS 385 (626)
Q Consensus 308 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nI-v~l~~~~~~~~~~~lv~E~~-~~gs 385 (626)
.+.|+.|....+|+. ..+++|+...... .......|+..++.+....+ .+++++ +++..++++||+ ++.+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~-~~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~~ 94 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTE-EYINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQT 94 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCcc-ceeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCcc
Confidence 678899999999998 3478888764311 11233568887777653333 355544 344568999999 6544
Q ss_pred h
Q 006907 386 V 386 (626)
Q Consensus 386 L 386 (626)
+
T Consensus 95 l 95 (301)
T 3dxq_A 95 M 95 (301)
T ss_dssp C
T ss_pred C
Confidence 4
No 427
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.03 E-value=0.005 Score=62.57 Aligned_cols=143 Identities=15% Similarity=0.054 Sum_probs=73.3
Q ss_pred ceeccCCCce-EEEEEeCCccEEEEEEecCCCcccHHHHHHHHHHHHhccC--CcccceeeeeecCCceEEEEeecCCCC
Q 006907 309 NILGQGGYGV-VYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALH--RNLLRLYGFCMTPEERLLVYPYMPNGS 385 (626)
Q Consensus 309 ~~lG~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~nIv~l~~~~~~~~~~~lv~E~~~~gs 385 (626)
+.|+.|.... +|+....++..+++|....... ..+..|+++++.+.. -.+.+++.+..+ ..+++||++.+.+
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~--~g~ll~e~l~~~~ 98 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHA--RGLLLIEDLGDAL 98 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETT--TTEEEECCCCSCB
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCC--CCEEEEeeCCCcc
Confidence 4565565554 6676654455677776543211 234556777666642 234556665332 2378999997766
Q ss_pred hHHHHhhcc---------------------C-CCCCCCHHHHH-------H-------------HHHHHHHHHHHHHh--
Q 006907 386 VADCLRDTR---------------------Q-AKPPLDWNRRM-------H-------------IALGTARGLLYLHE-- 421 (626)
Q Consensus 386 L~~~l~~~~---------------------~-~~~~l~~~~~~-------~-------------i~~~i~~~l~yLH~-- 421 (626)
+.+++.... . ....++..... . ....+...+..+..
T Consensus 99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~ 178 (333)
T 3csv_A 99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ 178 (333)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 655443210 0 01112211100 0 00111122233311
Q ss_pred -cCCCCeEecCCCCCcEEeCCC----CcEEEeeccCcccc
Q 006907 422 -QCNPKIIHRDVKAANILLDES----FEAVVGDFGLAKLL 456 (626)
Q Consensus 422 -~~~~~ivH~Dlkp~NILl~~~----~~~ki~DfG~a~~~ 456 (626)
...+.++|+|+.+.||+++.+ ..+.|+||+.+..-
T Consensus 179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 123479999999999999874 68999999988653
No 428
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.01 E-value=0.00086 Score=58.23 Aligned_cols=55 Identities=22% Similarity=0.328 Sum_probs=24.3
Q ss_pred EEEeCCCCCc-ccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccc
Q 006907 89 SLEMASMGLS-GTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQL 145 (626)
Q Consensus 89 ~l~L~~~~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 145 (626)
.++.++++|+ ..+|..+. ++|++|+|++|+|+..-+..|..+++|+.|+|++|.+
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 3444555554 23333221 2345555555555533333344444455544444443
No 429
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.00 E-value=0.0055 Score=61.99 Aligned_cols=143 Identities=16% Similarity=0.134 Sum_probs=82.7
Q ss_pred ceeccCCCceEEEEEeCCccEEEEEEecCCCcccHHHHHHHHHHHHhccCC--cccceeee-----eecCCceEEEEeec
Q 006907 309 NILGQGGYGVVYKGCLPNRMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHR--NLLRLYGF-----CMTPEERLLVYPYM 381 (626)
Q Consensus 309 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~--nIv~l~~~-----~~~~~~~~lv~E~~ 381 (626)
..++ |....||+....+|+.+++|....... ....+..|..+++.+... .+.+++.. ....+..+++|||+
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~-~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i 109 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPERW-TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSV 109 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTTS-CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECC
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCCC-CHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEec
Confidence 4566 888899998777776799999864322 345667788888777522 24445443 11234557899999
Q ss_pred CCCChH-----H------H---HhhccC-----CCCCCCHHHH----HHH---------------HHHHHHHHHHHHhc-
Q 006907 382 PNGSVA-----D------C---LRDTRQ-----AKPPLDWNRR----MHI---------------ALGTARGLLYLHEQ- 422 (626)
Q Consensus 382 ~~gsL~-----~------~---l~~~~~-----~~~~l~~~~~----~~i---------------~~~i~~~l~yLH~~- 422 (626)
+|.++. . . ++.... ....+++... ..+ ...+...++.+...
T Consensus 110 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 189 (328)
T 1zyl_A 110 GGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHW 189 (328)
T ss_dssp CCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 875432 1 1 111111 0112333221 001 11111223333321
Q ss_pred ---CCCCeEecCCCCCcEEeCCCCcEEEeeccCccc
Q 006907 423 ---CNPKIIHRDVKAANILLDESFEAVVGDFGLAKL 455 (626)
Q Consensus 423 ---~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~ 455 (626)
....++|+|+++.||+++ + .+.|+||+.+..
T Consensus 190 ~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 190 REDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred hhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 234689999999999999 4 899999988753
No 430
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.99 E-value=0.0013 Score=69.59 Aligned_cols=72 Identities=19% Similarity=0.271 Sum_probs=48.9
Q ss_pred CceeccCCCceEEEEEeCC--------ccEEEEEEecCCCcccHHHHHHHHHHHHhccCCcc-cceeeeeecCCceEEEE
Q 006907 308 KNILGQGGYGVVYKGCLPN--------RMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNL-LRLYGFCMTPEERLLVY 378 (626)
Q Consensus 308 ~~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nI-v~l~~~~~~~~~~~lv~ 378 (626)
.+.|+.|-...+|+....+ +..+++|+..... ....+..|..+++.+...++ .++++.+.+ .+|+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~--~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~ 151 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE--TESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 151 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC--CHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC--cHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence 3567888889999988653 4678899884421 12455678888888763334 566666532 3899
Q ss_pred eecCCCC
Q 006907 379 PYMPNGS 385 (626)
Q Consensus 379 E~~~~gs 385 (626)
||++|.+
T Consensus 152 e~l~G~~ 158 (429)
T 1nw1_A 152 EYIPSRP 158 (429)
T ss_dssp CCCCEEE
T ss_pred EEeCCcc
Confidence 9998643
No 431
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.98 E-value=8.9e-05 Score=69.11 Aligned_cols=107 Identities=19% Similarity=0.235 Sum_probs=61.8
Q ss_pred cEEEEEeCCC-CCcc----cCCccccCCcccceeeeccCCCCC----CCCcccCCccccceEecccccccCC----CCch
Q 006907 86 FVVSLEMASM-GLSG----TLSPSIGNLTHLRTMLLHNNQLSG----PIPVEFGMLSELQTLDLSNNQLVGE----IPSS 152 (626)
Q Consensus 86 ~v~~l~L~~~-~l~~----~~~~~~~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~g~----~p~~ 152 (626)
.+++|+|++| .|.. .+-..+..-+.|+.|+|++|+|.. .+-..+..-+.|+.|+|++|.|+.. +-+.
T Consensus 42 ~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~a 121 (197)
T 1pgv_A 42 DLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRS 121 (197)
T ss_dssp SCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHH
T ss_pred CccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHH
Confidence 4777777764 5542 234455556677777777777763 2333344556777777777777632 2223
Q ss_pred hhccccccceeecccc---ccC----CchhhhhcCCCCccccCCCCC
Q 006907 153 LGFLTHLTYLRLNNNK---LSG----QIPTLVANLTSLSFLDLSFNN 192 (626)
Q Consensus 153 ~~~l~~L~~L~l~~N~---l~~----~~p~~~~~l~~L~~L~l~~N~ 192 (626)
+..-+.|++|+|++|. +.. .+-..+..-+.|+.|+++.|.
T Consensus 122 L~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~ 168 (197)
T 1pgv_A 122 TLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFAS 168 (197)
T ss_dssp TTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCC
T ss_pred HhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCC
Confidence 3444567777776542 221 133445555667777776554
No 432
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.94 E-value=0.00071 Score=58.74 Aligned_cols=57 Identities=23% Similarity=0.262 Sum_probs=39.7
Q ss_pred ceeeeccCCCC-CCCCcccCCccccceEecccccccCCCCchhhccccccceeecccccc
Q 006907 112 RTMLLHNNQLS-GPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRLNNNKLS 170 (626)
Q Consensus 112 ~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~ 170 (626)
..++.++++|+ ..+|..+. ++|+.|+|++|+|+..-+..|..+++|+.|+|++|.+.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 36788888886 35665443 36788888888888544555677777777777777664
No 433
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.79 E-value=0.0061 Score=63.15 Aligned_cols=143 Identities=15% Similarity=0.152 Sum_probs=83.0
Q ss_pred CceeccCCCceEEEEEeCC--------ccEEEEEEecCCCcccHHHHHHHHHHHHhcc-CCcccceeeeeecCCceEEEE
Q 006907 308 KNILGQGGYGVVYKGCLPN--------RMVVAVKRLKDPNFTGEVQFQTEVEMIGLAL-HRNLLRLYGFCMTPEERLLVY 378 (626)
Q Consensus 308 ~~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lv~ 378 (626)
.+.+..|-...+|+....+ +..+++|+... .........+|.++++.+. +.-..++++++.+ .+||
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~-~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~ 129 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGA-ILQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLE 129 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEE
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCC-ccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEE
Confidence 3567778889999987642 46788888533 2223455678999988775 3333566666543 3999
Q ss_pred eecCCCChHH--------------H---HhhccC-CCCCCC--HHHHHHHHHHHHH-------------------HHHHH
Q 006907 379 PYMPNGSVAD--------------C---LRDTRQ-AKPPLD--WNRRMHIALGTAR-------------------GLLYL 419 (626)
Q Consensus 379 E~~~~gsL~~--------------~---l~~~~~-~~~~l~--~~~~~~i~~~i~~-------------------~l~yL 419 (626)
||++|.+|.. . ++.... ...... |.+..++..++.. .+..|
T Consensus 130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 209 (379)
T 3feg_A 130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL 209 (379)
T ss_dssp ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence 9998765431 1 111110 111222 4455555544322 23333
Q ss_pred H----hc-CCCCeEecCCCCCcEEeCCC----CcEEEeeccCccc
Q 006907 420 H----EQ-CNPKIIHRDVKAANILLDES----FEAVVGDFGLAKL 455 (626)
Q Consensus 420 H----~~-~~~~ivH~Dlkp~NILl~~~----~~~ki~DfG~a~~ 455 (626)
. .. ....++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 2 21 23368999999999999876 7899999998853
No 434
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.74 E-value=0.0088 Score=56.04 Aligned_cols=98 Identities=15% Similarity=0.150 Sum_probs=64.5
Q ss_pred ChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEeeccCccccCCCCCcee
Q 006907 385 SVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDRRDSHVT 464 (626)
Q Consensus 385 sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~~~~~~~~~~ 464 (626)
||.+.|... +.++++++++.++.|.+.+|.-+-.... + ..+=+.|..|++..+|.|.+.+ +.+.
T Consensus 34 SL~eIL~~~---~~PlsEEqaWALc~Qc~~~L~~~~~~~~-~-~~~i~~~~~i~l~~dG~V~f~~-~~s~---------- 97 (229)
T 2yle_A 34 SLEEILRLY---NQPINEEQAWAVCYQCCGSLRAAARRRQ-P-RHRVRSAAQIRVWRDGAVTLAP-AADD---------- 97 (229)
T ss_dssp EHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHHHTTC-C-CCCCCSGGGEEEETTSCEEECC-C-------------
T ss_pred cHHHHHHHc---CCCcCHHHHHHHHHHHHHHHHhhhhccc-C-CceecCCcceEEecCCceeccc-cccc----------
Confidence 799999865 3479999999999999998877632111 1 1223346889999999998764 1110
Q ss_pred eeecccCCccCccccccCCCCccchhHHHHHHHHHHHh
Q 006907 465 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELIT 502 (626)
Q Consensus 465 ~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~ellt 502 (626)
.....+.+||... ...+.+.=|||+|+++|.-+-
T Consensus 98 ---~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALD 131 (229)
T 2yle_A 98 ---AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALD 131 (229)
T ss_dssp ------------CCSS-SSSCHHHHHHHHHHHHHHHHT
T ss_pred ---ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhh
Confidence 0123466888763 355788899999999999875
No 435
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.65 E-value=0.0063 Score=64.78 Aligned_cols=74 Identities=11% Similarity=0.122 Sum_probs=47.1
Q ss_pred CceeccCCCceEEEEEeCC-ccEEEEEEecCCCcccHHHHHHHHHHHHhccCCcc-cceeeeeecCCceEEEEeecCCCC
Q 006907 308 KNILGQGGYGVVYKGCLPN-RMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRNL-LRLYGFCMTPEERLLVYPYMPNGS 385 (626)
Q Consensus 308 ~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nI-v~l~~~~~~~~~~~lv~E~~~~gs 385 (626)
.+.|+.|-...+|+....+ +..+++|+..... ........|..+++.+...++ .++++++. + .+|+||++|.+
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~-~~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~ 187 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKT-DEIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYA 187 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-C-CSCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCCh-hhhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCcc
Confidence 4568888889999988765 4678888874321 111123578888888864444 56677662 2 35999998754
Q ss_pred h
Q 006907 386 V 386 (626)
Q Consensus 386 L 386 (626)
|
T Consensus 188 l 188 (458)
T 2qg7_A 188 L 188 (458)
T ss_dssp C
T ss_pred C
Confidence 3
No 436
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.54 E-value=0.0059 Score=63.04 Aligned_cols=72 Identities=8% Similarity=-0.027 Sum_probs=43.2
Q ss_pred ceeccCCCceEEEEEeCCc---------cEEEEEEecCCCcccHHHHHHHHHHHHhccCCc-ccceeeeeecCCceEEEE
Q 006907 309 NILGQGGYGVVYKGCLPNR---------MVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRN-LLRLYGFCMTPEERLLVY 378 (626)
Q Consensus 309 ~~lG~G~~g~Vy~~~~~~~---------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-Iv~l~~~~~~~~~~~lv~ 378 (626)
+.++.|....+|+....++ ..+++|+..... ........|.++++.+...+ +.++++.. ..++||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~-~~~~~~~~E~~~l~~L~~~g~~P~~~~~~----~~~~v~ 113 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHV-DELYNTISEFEVYKTMSKYKIAPQLLNTF----NGGRIE 113 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTG-GGTSCHHHHHHHHHHHHHTTSSCCEEEEE----TTEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCc-cceecHHHHHHHHHHHHhcCCCCceEEec----CCcEEE
Confidence 5677888899999876542 578888765421 11113467888888775334 34666543 237899
Q ss_pred eecCCCC
Q 006907 379 PYMPNGS 385 (626)
Q Consensus 379 E~~~~gs 385 (626)
||++|.+
T Consensus 114 e~i~G~~ 120 (369)
T 3c5i_A 114 EWLYGDP 120 (369)
T ss_dssp ECCCSEE
T ss_pred EEecCCc
Confidence 9998754
No 437
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.44 E-value=0.00078 Score=62.70 Aligned_cols=92 Identities=12% Similarity=0.087 Sum_probs=68.3
Q ss_pred CccccCCcccceeeeccC-CCCC----CCCcccCCccccceEecccccccC----CCCchhhccccccceeeccccccCC
Q 006907 102 SPSIGNLTHLRTMLLHNN-QLSG----PIPVEFGMLSELQTLDLSNNQLVG----EIPSSLGFLTHLTYLRLNNNKLSGQ 172 (626)
Q Consensus 102 ~~~~~~l~~L~~L~L~~N-~l~~----~~p~~~~~l~~L~~L~L~~N~l~g----~~p~~~~~l~~L~~L~l~~N~l~~~ 172 (626)
...+.+-+.|++|+|++| +|.. .+-..+..-+.|+.|+|++|+|.. .+-..+..-+.|+.|+|++|.|...
T Consensus 34 ~~ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~ 113 (197)
T 1pgv_A 34 NRLREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPE 113 (197)
T ss_dssp HHHHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHH
T ss_pred HHHHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHH
Confidence 334455678999999986 8763 244556677899999999999983 3445566678999999999999843
Q ss_pred ----chhhhhcCCCCccccCCCCCC
Q 006907 173 ----IPTLVANLTSLSFLDLSFNNL 193 (626)
Q Consensus 173 ----~p~~~~~l~~L~~L~l~~N~l 193 (626)
+-..+..-+.|+.|+|++|..
T Consensus 114 Ga~ala~aL~~N~tL~~L~L~n~~~ 138 (197)
T 1pgv_A 114 LLARLLRSTLVTQSIVEFKADNQRQ 138 (197)
T ss_dssp HHHHHHHHTTTTCCCSEEECCCCSS
T ss_pred HHHHHHHHHhhCCceeEEECCCCcC
Confidence 334455567799999997643
No 438
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.35 E-value=0.021 Score=58.13 Aligned_cols=31 Identities=23% Similarity=0.318 Sum_probs=27.6
Q ss_pred CCeEecCCCCCcEEeCCCCcEEEeeccCccc
Q 006907 425 PKIIHRDVKAANILLDESFEAVVGDFGLAKL 455 (626)
Q Consensus 425 ~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~ 455 (626)
..++|+|+.+.||++++++.+.|+||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 4799999999999999888899999987764
No 439
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=96.23 E-value=0.0057 Score=63.34 Aligned_cols=85 Identities=14% Similarity=0.121 Sum_probs=35.6
Q ss_pred ccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhccccccceeeccccccCCchhhhhcCCC
Q 006907 103 PSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRLNNNKLSGQIPTLVANLTS 182 (626)
Q Consensus 103 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~ 182 (626)
..|.++.+|+.+.+..+ ++..-...|.++.+|+.+.+..+ ++..-...|.++++|+.+.+.+|.++..-..+|.++.+
T Consensus 234 ~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~ 311 (379)
T 4h09_A 234 GAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVK 311 (379)
T ss_dssp TTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTT
T ss_pred ccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCC
Confidence 34444455555555433 32222333444444444444332 22122233444444444444444444222234444444
Q ss_pred CccccCC
Q 006907 183 LSFLDLS 189 (626)
Q Consensus 183 L~~L~l~ 189 (626)
|+.+.|.
T Consensus 312 L~~i~lp 318 (379)
T 4h09_A 312 LSSVTLP 318 (379)
T ss_dssp CCEEECC
T ss_pred CCEEEcC
Confidence 4444443
No 440
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=96.16 E-value=0.0077 Score=62.81 Aligned_cols=87 Identities=11% Similarity=0.159 Sum_probs=46.8
Q ss_pred ccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhccccccceeeccccccCCchhhhhcCCC
Q 006907 103 PSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRLNNNKLSGQIPTLVANLTS 182 (626)
Q Consensus 103 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~ 182 (626)
..|.++++|+.+.+. +.++..-...|.++++|+.++|..| ++..-..+|.+|.+|+.+.|..| ++..-..+|.++++
T Consensus 282 ~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~ 358 (394)
T 4gt6_A 282 GAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTA 358 (394)
T ss_dssp TTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTT
T ss_pred cccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCC
Confidence 345555556665554 3344222345666666666666544 44233445666666666666443 44233455666666
Q ss_pred CccccCCCCC
Q 006907 183 LSFLDLSFNN 192 (626)
Q Consensus 183 L~~L~l~~N~ 192 (626)
|+.+++.+|.
T Consensus 359 L~~i~~~~~~ 368 (394)
T 4gt6_A 359 LNNIEYSGSR 368 (394)
T ss_dssp CCEEEESSCH
T ss_pred CCEEEECCce
Confidence 6666666553
No 441
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=96.04 E-value=0.0051 Score=64.19 Aligned_cols=87 Identities=14% Similarity=0.034 Sum_probs=67.3
Q ss_pred CccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhccccccceeeccccccCCchhhhhcCC
Q 006907 102 SPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRLNNNKLSGQIPTLVANLT 181 (626)
Q Consensus 102 ~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~ 181 (626)
...|..+.+|+.+.+.++ ++..-..+|.++++|+.++|.++ ++..-..+|.+|++|+.++|..| ++..-..+|.+++
T Consensus 290 ~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~ 366 (394)
T 4fs7_A 290 EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCI 366 (394)
T ss_dssp TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCT
T ss_pred cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCC
Confidence 346788899999999765 55344567889999999999755 66444677999999999999877 6634456899999
Q ss_pred CCccccCCCC
Q 006907 182 SLSFLDLSFN 191 (626)
Q Consensus 182 ~L~~L~l~~N 191 (626)
+|+.+++..|
T Consensus 367 ~L~~i~lp~~ 376 (394)
T 4fs7_A 367 NLKKVELPKR 376 (394)
T ss_dssp TCCEEEEEGG
T ss_pred CCCEEEECCC
Confidence 9999988654
No 442
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=95.85 E-value=0.0073 Score=62.97 Aligned_cols=102 Identities=9% Similarity=0.151 Sum_probs=68.6
Q ss_pred EEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhccccccceeecc
Q 006907 87 VVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRLNN 166 (626)
Q Consensus 87 v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~ 166 (626)
++.+.+. ++++..-...|.++.+|+.++|..| ++..-..+|.++++|+.+.|..+ ++..-...|.+|++|+.+++.+
T Consensus 290 L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~ 366 (394)
T 4gt6_A 290 LQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSG 366 (394)
T ss_dssp CCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESS
T ss_pred cccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECC
Confidence 4444443 3455455568899999999999865 66344678999999999999765 6634456799999999999998
Q ss_pred ccccCCchhhhhcCCCCccccCCCCCCC
Q 006907 167 NKLSGQIPTLVANLTSLSFLDLSFNNLS 194 (626)
Q Consensus 167 N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 194 (626)
|... -..+....+|+.+.+..|.+.
T Consensus 367 ~~~~---~~~~~~~~~L~~i~i~~~~~~ 391 (394)
T 4gt6_A 367 SRSQ---WNAISTDSGLQNLPVAPGSID 391 (394)
T ss_dssp CHHH---HHTCBCCCCC-----------
T ss_pred ceee---hhhhhccCCCCEEEeCCCCEE
Confidence 8654 246777888998888777653
No 443
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.40 E-value=0.028 Score=58.49 Aligned_cols=142 Identities=15% Similarity=0.159 Sum_probs=80.6
Q ss_pred ceeccCCCceEEEEEeCC--------ccEEEEEEecCCCc-----------ccH-------HHHHHHHHHHHhcc-CCcc
Q 006907 309 NILGQGGYGVVYKGCLPN--------RMVVAVKRLKDPNF-----------TGE-------VQFQTEVEMIGLAL-HRNL 361 (626)
Q Consensus 309 ~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~-----------~~~-------~~~~~E~~~l~~l~-h~nI 361 (626)
+.|..|-...+|+...++ ...|.+++...... .+. .....|..+++.+. +--.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 456667778899987653 25678887643211 001 12234888888775 4344
Q ss_pred cceeeeeecCCceEEEEeecCCCChHH--------------H---Hhhcc-CCCCCCC--HHHHHHHHHHHH--------
Q 006907 362 LRLYGFCMTPEERLLVYPYMPNGSVAD--------------C---LRDTR-QAKPPLD--WNRRMHIALGTA-------- 413 (626)
Q Consensus 362 v~l~~~~~~~~~~~lv~E~~~~gsL~~--------------~---l~~~~-~~~~~l~--~~~~~~i~~~i~-------- 413 (626)
.++++++.+ .+|+||+++-+|.. . ++... ....... |....++..++.
T Consensus 138 Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 567776643 28999998654321 1 11110 1111222 334444443321
Q ss_pred --------------HHHHH----HHhc-CCCCeEecCCCCCcEEeCCC------CcEEEeeccCcc
Q 006907 414 --------------RGLLY----LHEQ-CNPKIIHRDVKAANILLDES------FEAVVGDFGLAK 454 (626)
Q Consensus 414 --------------~~l~y----LH~~-~~~~ivH~Dlkp~NILl~~~------~~~ki~DfG~a~ 454 (626)
.-+.. |... ....++|+|+.+.||+++++ +.+.++||..+.
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 11222 2221 23368899999999999876 789999999875
No 444
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=95.21 E-value=0.011 Score=61.65 Aligned_cols=109 Identities=14% Similarity=0.047 Sum_probs=78.7
Q ss_pred EEEEEeCCCCCcccCCccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhccccccceeecc
Q 006907 87 VVSLEMASMGLSGTLSPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRLNN 166 (626)
Q Consensus 87 v~~l~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~ 166 (626)
++.+.+..+. ...-...|..+..|+.+.+..+.+. ...|..+.+|+.+.+.+| ++..-...|.++++|+.++|.+
T Consensus 255 l~~~~~~~~~-~~i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~ 329 (394)
T 4fs7_A 255 LESISIQNNK-LRIGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPY 329 (394)
T ss_dssp CCEEEECCTT-CEECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCT
T ss_pred ceeEEcCCCc-ceeeccccccccccceeccCceeec---cccccccccccccccccc-cceechhhhcCCCCCCEEEeCC
Confidence 4455555443 3345567888999999988876543 346889999999999876 5644567799999999999975
Q ss_pred ccccCCchhhhhcCCCCccccCCCCCCCCCCCcccc
Q 006907 167 NKLSGQIPTLVANLTSLSFLDLSFNNLSGPTPKVLA 202 (626)
Q Consensus 167 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~ 202 (626)
+ ++..-..+|.++.+|+.+++..| ++......|.
T Consensus 330 ~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~ 363 (394)
T 4fs7_A 330 L-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQ 363 (394)
T ss_dssp T-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBT
T ss_pred c-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhh
Confidence 4 66334578999999999999876 5533333443
No 445
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.70 E-value=0.14 Score=53.73 Aligned_cols=141 Identities=11% Similarity=0.077 Sum_probs=82.9
Q ss_pred ceeccCCCceEEEEEeCC--------ccEEEEEEecCCCcccHHHHHHHHHHHHhccCCc-ccceeeeeecCCceEEEEe
Q 006907 309 NILGQGGYGVVYKGCLPN--------RMVVAVKRLKDPNFTGEVQFQTEVEMIGLALHRN-LLRLYGFCMTPEERLLVYP 379 (626)
Q Consensus 309 ~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-Iv~l~~~~~~~~~~~lv~E 379 (626)
+.+..|-...+|+....+ +..+++|+..... .......+|.++++.+...+ ..++++.+ ..+.|+|
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~----~~~~I~e 150 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADF----PEGRIEE 150 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEE----TTEEEEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEc----CCCEEEE
Confidence 567778889999987753 4678888864322 11123467888888775323 34555533 2378999
Q ss_pred ecCCCChHH--------------H---Hhhcc------C---CCCCCCHHHHHHHHHHH-------------------HH
Q 006907 380 YMPNGSVAD--------------C---LRDTR------Q---AKPPLDWNRRMHIALGT-------------------AR 414 (626)
Q Consensus 380 ~~~~gsL~~--------------~---l~~~~------~---~~~~l~~~~~~~i~~~i-------------------~~ 414 (626)
|++|.+|.. . ++... . ...+..|.+..++..++ ..
T Consensus 151 fI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~ 230 (424)
T 3mes_A 151 FIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSKILE 230 (424)
T ss_dssp CCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHHHHH
T ss_pred EeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHHHHH
Confidence 999865321 0 11110 0 11122344444443322 12
Q ss_pred HHHHHHh---------------------cCCCCeEecCCCCCcEEeCCCCcEEEeeccCccc
Q 006907 415 GLLYLHE---------------------QCNPKIIHRDVKAANILLDESFEAVVGDFGLAKL 455 (626)
Q Consensus 415 ~l~yLH~---------------------~~~~~ivH~Dlkp~NILl~~~~~~ki~DfG~a~~ 455 (626)
.+.+|.+ .....++|+|+.+.||+ +.++.+.++||..+..
T Consensus 231 e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 231 EIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp HHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 2333321 11236899999999999 7788999999998863
No 446
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=94.69 E-value=0.046 Score=56.34 Aligned_cols=86 Identities=17% Similarity=0.079 Sum_probs=42.2
Q ss_pred CccccCCcccceeeeccCCCCCCCCcccCCccccceEecccccccCCCCchhhccccccceeeccccccCCchhhhhcCC
Q 006907 102 SPSIGNLTHLRTMLLHNNQLSGPIPVEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRLNNNKLSGQIPTLVANLT 181 (626)
Q Consensus 102 ~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~ 181 (626)
...|.++.+|+.+.+..+ +...-...|.++++|+.+.|.+|.++..-+..|.+|.+|+.+.|..| ++..-..+|.++.
T Consensus 256 ~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~ 333 (379)
T 4h09_A 256 SFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCK 333 (379)
T ss_dssp TTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCT
T ss_pred ccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCC
Confidence 334555555555555432 33222334555555555555555555333444555555555555433 3312234555555
Q ss_pred CCccccCC
Q 006907 182 SLSFLDLS 189 (626)
Q Consensus 182 ~L~~L~l~ 189 (626)
+|+.+.+.
T Consensus 334 ~L~~i~ip 341 (379)
T 4h09_A 334 ALSTISYP 341 (379)
T ss_dssp TCCCCCCC
T ss_pred CCCEEEEC
Confidence 55555543
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=90.09 E-value=0.78 Score=47.58 Aligned_cols=29 Identities=31% Similarity=0.476 Sum_probs=24.9
Q ss_pred eEecCCCCCcEEe------CCCCcEEEeeccCccc
Q 006907 427 IIHRDVKAANILL------DESFEAVVGDFGLAKL 455 (626)
Q Consensus 427 ivH~Dlkp~NILl------~~~~~~ki~DfG~a~~ 455 (626)
++|+|+.+.||++ +++..+.++||.+|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5799999999999 4567899999998864
No 448
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=84.90 E-value=2.1 Score=39.91 Aligned_cols=115 Identities=10% Similarity=0.128 Sum_probs=78.1
Q ss_pred cCCcccceeeeeecCCceEEEEeecCCC-ChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCC
Q 006907 357 LHRNLLRLYGFCMTPEERLLVYPYMPNG-SVADCLRDTRQAKPPLDWNRRMHIALGTARGLLYLHEQCNPKIIHRDVKAA 435 (626)
Q Consensus 357 ~h~nIv~l~~~~~~~~~~~lv~E~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivH~Dlkp~ 435 (626)
.||+.+.. .+-.+.+...+.|+.-+.+ ++.. ++ ..+...+++++..|+....+++.. +|--+.|+
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-ik-------~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~ 108 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-IK-------SFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPD 108 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-GG-------GSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGG
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-HH-------hcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecc
Confidence 47888766 4555666666666554322 3333 32 278899999999999888666644 78889999
Q ss_pred cEEeCCCCcEEEeeccCccccCCCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCC
Q 006907 436 NILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALD 508 (626)
Q Consensus 436 NILl~~~~~~ki~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~ 508 (626)
|++++.++.+++.=.|+...+. |. ..++..=.-.+=+++..+++++..|+
T Consensus 109 NL~f~~~~~p~i~~RGik~~l~------------------P~-----~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 109 ELFFTRDGLPIAKTRGLQNVVD------------------PL-----PVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp GEEECTTSCEEESCCEETTTBS------------------CC-----CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred eEEEcCCCCEEEEEccCccCCC------------------CC-----CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 9999999999998777643222 11 11222224466788889999998886
No 449
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=80.88 E-value=3.7 Score=38.32 Aligned_cols=115 Identities=13% Similarity=0.133 Sum_probs=76.3
Q ss_pred cCCcccceeeeeecCCceEEEEeecCCCChHHHHhhccCCCCCCCHHHHHHHHHHHHHHHH-HHHhcCCCCeEecCCCCC
Q 006907 357 LHRNLLRLYGFCMTPEERLLVYPYMPNGSVADCLRDTRQAKPPLDWNRRMHIALGTARGLL-YLHEQCNPKIIHRDVKAA 435 (626)
Q Consensus 357 ~h~nIv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~-yLH~~~~~~ivH~Dlkp~ 435 (626)
.||+. -..+-.+.+...+.|+.-+++.=...++ ..+...+++++..++.... +++. -+|--+.|+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~-------~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P~ 113 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR-------KTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCPE 113 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH-------TSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCGG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH-------hcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeCc
Confidence 47777 3444466677777777654443233343 2788999999999887666 5554 478889999
Q ss_pred cEEeCCCCcEEEeeccCccccCCCCCceeeeecccCCccCccccccCCCCccchhHHHHHHHHHHHhCCCcCC
Q 006907 436 NILLDESFEAVVGDFGLAKLLDRRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGVLLLELITGQKALD 508 (626)
Q Consensus 436 NILl~~~~~~ki~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~~~DvwSlGvil~elltg~~p~~ 508 (626)
|+++|.++.++|.-.|+-..+ +|.-+ ++.-=.-.+=+++..++.++..|+
T Consensus 114 NL~f~~~~~p~i~hRGi~~~l------------------pP~e~-----~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 114 NLMFNRALEPFFLHVGVKESL------------------PPDEW-----DDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp GEEECTTCCEEESCCEETTTB------------------SSCSC-----CHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred eEEEeCCCcEEEEEcCCcccC------------------CCCCC-----CHHHHHHHHHHHHHHHHcCCCCHH
Confidence 999999999999877764332 22211 111123456678888888888775
No 450
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=78.66 E-value=0.26 Score=52.29 Aligned_cols=61 Identities=8% Similarity=0.034 Sum_probs=18.2
Q ss_pred CcCceeccCCCceEEEEEeCC-ccEEEE------EEecCCCcc--cHHHHHHHHHHHHhccCCcccceeeeee
Q 006907 306 SPKNILGQGGYGVVYKGCLPN-RMVVAV------KRLKDPNFT--GEVQFQTEVEMIGLALHRNLLRLYGFCM 369 (626)
Q Consensus 306 ~~~~~lG~G~~g~Vy~~~~~~-~~~vav------K~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~ 369 (626)
.+.+.|| ||.||+|.+.. ..+||| |..+..... ....+.+|..+++..+|||+++.+++..
T Consensus 145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp CSTTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred cccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 3456676 99999998764 367888 766543322 1235778888888899999999988764
No 451
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=68.91 E-value=58 Score=35.22 Aligned_cols=85 Identities=18% Similarity=0.178 Sum_probs=52.1
Q ss_pred cceeeeeecCCceEEEEeecCCCChHHH----------HhhccCCCC---CCCHHHHHHHHHHHHH--HHHHHHhcCCCC
Q 006907 362 LRLYGFCMTPEERLLVYPYMPNGSVADC----------LRDTRQAKP---PLDWNRRMHIALGTAR--GLLYLHEQCNPK 426 (626)
Q Consensus 362 v~l~~~~~~~~~~~lv~E~~~~gsL~~~----------l~~~~~~~~---~l~~~~~~~i~~~i~~--~l~yLH~~~~~~ 426 (626)
++.|.+........+ .|++++.++.+. +........ ...|..+..++..+|- .+.|+=.-
T Consensus 402 i~~Y~Vipls~~~Gl-IE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YILGi---- 476 (614)
T 3ls8_A 402 LTPYKVLATSTKHGF-MQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILGV---- 476 (614)
T ss_dssp CCCCCEEESSSSEEE-EECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHHTC----
T ss_pred eeccEEEEecCCCce-EEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheeeec----
Confidence 455666666555555 478776554444 433221111 1235556666655443 34455432
Q ss_pred eEecCCCCCcEEeCCCCcEEEeeccCcc
Q 006907 427 IIHRDVKAANILLDESFEAVVGDFGLAK 454 (626)
Q Consensus 427 ivH~Dlkp~NILl~~~~~~ki~DfG~a~ 454 (626)
+|=.++|||++.+|++.=+|||.+.
T Consensus 477 ---gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 477 ---GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp ---CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred ---cCCCCcceeEcCCCCEeeeehHHhh
Confidence 5778999999999999999999874
No 452
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=45.73 E-value=2.3e+02 Score=31.06 Aligned_cols=85 Identities=21% Similarity=0.205 Sum_probs=49.4
Q ss_pred cceeeeeecCCceEEEEeecCCCChHHHHhh----------ccCCC-CCC--CHHHHHHHHHHHHH--HHHHHHhcCCCC
Q 006907 362 LRLYGFCMTPEERLLVYPYMPNGSVADCLRD----------TRQAK-PPL--DWNRRMHIALGTAR--GLLYLHEQCNPK 426 (626)
Q Consensus 362 v~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~----------~~~~~-~~l--~~~~~~~i~~~i~~--~l~yLH~~~~~~ 426 (626)
++.|.+........+| |++++-+|.+.+.. ..... ..+ ....+..++..+|- .+.|+=.
T Consensus 476 i~~Y~Vipls~~~GLI-E~V~s~tl~~i~~~~~~l~~~f~~~~p~~~~~~~~~~~ar~nF~~SlA~~Svv~YILG----- 549 (696)
T 2x6h_A 476 LTPYKVLATSSKHGFL-QYVDSCTVAEVLAREGNIHNFFRKHHPCDNGPYGISAEVMDTYIKSCAGYCVITYLLG----- 549 (696)
T ss_dssp CCCCCEEESSTTCEEE-ECCCCEEHHHHHHHSSSHHHHHHHHSBCTTSSSSBCHHHHHHHHHHHHHHHHHHHHHT-----
T ss_pred EeccEEEeccCCCCee-eeCCCccHHHHHHhcChHHHHHHHHCCCccchhhhHHHHHHHHHHHHHHHHHHHHHcc-----
Confidence 3445555555554544 77766555555433 21111 111 12344555554432 2344432
Q ss_pred eEecCCCCCcEEeCCCCcEEEeeccCcc
Q 006907 427 IIHRDVKAANILLDESFEAVVGDFGLAK 454 (626)
Q Consensus 427 ivH~Dlkp~NILl~~~~~~ki~DfG~a~ 454 (626)
-+|=.++|||++..|++.-+|||.+.
T Consensus 550 --lGDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 550 --VGDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp --CCCCCTTTEEECTTSCEEECCCCSCT
T ss_pred --CCCCCCcceEEeCCCCEEEEeehhhh
Confidence 26889999999999999999999875
No 453
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=41.91 E-value=69 Score=25.40 Aligned_cols=38 Identities=16% Similarity=0.037 Sum_probs=16.3
Q ss_pred cccCCccccceEecccccccCCCCchhhccccccceeec
Q 006907 127 VEFGMLSELQTLDLSNNQLVGEIPSSLGFLTHLTYLRLN 165 (626)
Q Consensus 127 ~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~ 165 (626)
..|.++++|+.+.|..+ ++..-...|.+|.+|+.+.+.
T Consensus 14 ~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~ 51 (100)
T 2lz0_A 14 SLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILT 51 (100)
T ss_dssp CTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEEC
T ss_pred HHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEc
Confidence 34444444444444443 221223344445555555443
No 454
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=40.82 E-value=30 Score=27.58 Aligned_cols=45 Identities=20% Similarity=0.082 Sum_probs=25.2
Q ss_pred ccCCCCchhhccccccceeeccccccCCchhhhhcCCCCccccCCC
Q 006907 145 LVGEIPSSLGFLTHLTYLRLNNNKLSGQIPTLVANLTSLSFLDLSF 190 (626)
Q Consensus 145 l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~ 190 (626)
++..-...|.+|++|+.+.|-.+ ++..-..+|.++.+|+.+.+.+
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 34333455666667776666554 3323345666666666666654
Done!