Query 006908
Match_columns 626
No_of_seqs 605 out of 4885
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 12:08:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006908.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006908hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3jxv_A 70 kDa peptidyl-prolyl 100.0 1.6E-62 5.3E-67 516.9 28.5 343 23-382 5-355 (356)
2 1kt0_A FKBP51, 51 kDa FK506-bi 100.0 1.1E-54 3.8E-59 474.9 41.9 388 151-553 29-422 (457)
3 1kt0_A FKBP51, 51 kDa FK506-bi 100.0 2.1E-42 7.2E-47 377.8 26.1 378 22-503 22-407 (457)
4 1q1c_A FK506-binding protein 4 100.0 4.7E-40 1.6E-44 332.4 28.4 228 22-263 42-278 (280)
5 3jxv_A 70 kDa peptidyl-prolyl 100.0 4.7E-38 1.6E-42 330.5 27.4 227 24-258 122-354 (356)
6 1q1c_A FK506-binding protein 4 100.0 2.3E-37 7.8E-42 312.8 27.8 223 151-387 49-279 (280)
7 2if4_A ATFKBP42; FKBP-like, al 100.0 9.3E-38 3.2E-42 327.6 22.7 277 266-550 48-332 (338)
8 1p5q_A FKBP52, FK506-binding p 100.0 2.4E-34 8.1E-39 301.4 33.9 276 260-549 18-297 (336)
9 2if4_A ATFKBP42; FKBP-like, al 99.9 5.3E-25 1.8E-29 230.5 17.7 272 151-515 47-333 (338)
10 1r9h_A FKB-6, FK506 binding pr 99.9 5.2E-23 1.8E-27 185.0 13.4 128 22-157 5-135 (135)
11 1p5q_A FKBP52, FK506-binding p 99.9 2.9E-22 9.9E-27 209.5 19.6 267 148-509 20-293 (336)
12 3o5e_A Peptidyl-prolyl CIS-tra 99.9 1.1E-22 3.6E-27 185.0 12.9 115 22-144 26-142 (144)
13 3kz7_A FK506-binding protein 3 99.9 2.5E-22 8.5E-27 177.0 14.2 114 27-143 2-118 (119)
14 3o5q_A Peptidyl-prolyl CIS-tra 99.9 2.2E-22 7.7E-27 179.3 13.8 111 26-144 16-126 (128)
15 1yat_A FK506 binding protein; 99.9 3.7E-22 1.3E-26 174.1 14.2 111 26-144 3-113 (113)
16 2y78_A Peptidyl-prolyl CIS-tra 99.9 9.8E-22 3.4E-26 175.9 15.1 113 22-143 21-133 (133)
17 2ppn_A FK506-binding protein 1 99.9 9.6E-22 3.3E-26 169.8 13.7 106 30-143 1-106 (107)
18 3b7x_A FK506-binding protein 6 99.9 2.3E-22 7.8E-27 180.6 8.8 116 20-144 17-133 (134)
19 2f4e_A ATFKBP42; FKBP-like, al 99.9 1.7E-21 5.7E-26 183.5 14.9 123 18-147 38-162 (180)
20 1jvw_A Macrophage infectivity 99.9 1.2E-21 4.2E-26 181.4 13.5 115 22-146 30-144 (167)
21 4dip_A Peptidyl-prolyl CIS-tra 99.9 2.4E-21 8.4E-26 172.0 14.6 116 22-145 5-123 (125)
22 1r9h_A FKB-6, FK506 binding pr 99.9 2E-21 6.9E-26 174.6 14.0 120 151-271 12-135 (135)
23 2lgo_A FKBP; infectious diseas 99.9 1.1E-21 3.8E-26 174.9 11.8 114 22-143 15-130 (130)
24 2vn1_A 70 kDa peptidylprolyl i 99.9 4.2E-21 1.4E-25 171.5 14.7 115 23-145 9-127 (129)
25 1u79_A FKBP-type peptidyl-prol 99.9 1.3E-21 4.4E-26 174.7 11.0 121 18-143 1-128 (129)
26 2jwx_A FKBP38NTD, FK506-bindin 99.9 5.6E-21 1.9E-25 175.0 15.2 115 19-146 33-150 (157)
27 3uf8_A Ubiquitin-like protein 99.9 6.2E-21 2.1E-25 183.9 15.0 112 23-143 98-209 (209)
28 3kz7_A FK506-binding protein 3 99.8 1.1E-20 3.7E-25 166.5 14.9 106 152-257 3-118 (119)
29 2d9f_A FK506-binding protein 8 99.8 5.5E-21 1.9E-25 171.8 13.2 121 15-147 3-125 (135)
30 1fd9_A Protein (macrophage inf 99.8 6.1E-21 2.1E-25 183.6 14.3 113 22-145 99-211 (213)
31 2awg_A 38 kDa FK-506 binding p 99.8 7.7E-21 2.6E-25 166.9 13.7 113 20-144 4-117 (118)
32 3oe2_A Peptidyl-prolyl CIS-tra 99.8 5.4E-21 1.9E-25 183.6 13.7 110 21-144 109-218 (219)
33 2lkn_A AH receptor-interacting 99.8 1.6E-21 5.6E-26 178.9 9.4 88 25-116 6-96 (165)
34 3rkv_A Putative peptidylprolyl 99.8 4.6E-21 1.6E-25 177.7 12.3 154 391-545 4-161 (162)
35 2lkn_A AH receptor-interacting 99.8 2E-21 6.7E-26 178.4 9.0 119 264-386 7-162 (165)
36 3o5e_A Peptidyl-prolyl CIS-tra 99.8 2.3E-20 8E-25 169.5 14.8 108 151-258 33-142 (144)
37 3o5q_A Peptidyl-prolyl CIS-tra 99.8 3.1E-20 1.1E-24 165.4 14.3 109 150-258 16-126 (128)
38 4dip_A Peptidyl-prolyl CIS-tra 99.8 4.3E-20 1.5E-24 164.0 14.5 110 149-258 8-122 (125)
39 1q6h_A FKBP-type peptidyl-prol 99.8 3.9E-20 1.3E-24 179.2 14.5 110 22-143 114-223 (224)
40 2f4e_A ATFKBP42; FKBP-like, al 99.8 4.2E-20 1.5E-24 173.9 14.1 126 266-398 48-179 (180)
41 1yat_A FK506 binding protein; 99.8 1.2E-19 4.2E-24 158.1 15.2 106 152-257 5-112 (113)
42 2ppn_A FK506-binding protein 1 99.8 1.1E-19 3.8E-24 156.8 13.8 104 154-257 1-106 (107)
43 2y78_A Peptidyl-prolyl CIS-tra 99.8 1.2E-19 4.3E-24 162.2 14.2 108 149-257 24-133 (133)
44 3oe2_A Peptidyl-prolyl CIS-tra 99.8 1.6E-19 5.3E-24 173.5 14.1 104 150-258 114-218 (219)
45 2vn1_A 70 kDa peptidylprolyl i 99.8 5.2E-19 1.8E-23 157.9 15.2 110 150-259 13-127 (129)
46 3b7x_A FK506-binding protein 6 99.8 9E-20 3.1E-24 163.6 10.3 109 148-257 21-132 (134)
47 2pbc_A FK506-binding protein 2 99.8 4.6E-19 1.6E-23 151.5 12.9 96 43-146 4-99 (102)
48 2jwx_A FKBP38NTD, FK506-bindin 99.8 5.7E-19 2E-23 161.7 14.2 107 151-260 41-150 (157)
49 2lgo_A FKBP; infectious diseas 99.8 4.2E-19 1.4E-23 158.2 12.8 107 151-257 20-130 (130)
50 3uf8_A Ubiquitin-like protein 99.8 1.1E-18 3.7E-23 168.2 16.1 109 148-257 99-209 (209)
51 2awg_A 38 kDa FK-506 binding p 99.8 1.1E-18 3.9E-23 153.1 14.4 106 150-258 10-117 (118)
52 4gco_A Protein STI-1; structur 99.8 2.6E-18 9E-23 152.7 15.9 115 395-525 10-124 (126)
53 1u79_A FKBP-type peptidyl-prol 99.8 4.2E-19 1.4E-23 158.3 10.7 107 150-257 9-128 (129)
54 1jvw_A Macrophage infectivity 99.8 8.2E-19 2.8E-23 162.5 12.2 107 149-258 33-142 (167)
55 2d9f_A FK506-binding protein 8 99.8 8.5E-19 2.9E-23 157.5 11.3 109 150-261 14-125 (135)
56 2hr2_A Hypothetical protein; a 99.8 7.5E-19 2.6E-23 160.7 10.8 139 393-535 6-155 (159)
57 1fd9_A Protein (macrophage inf 99.8 2.3E-18 7.8E-23 165.6 13.3 107 149-258 102-210 (213)
58 1q6h_A FKBP-type peptidyl-prol 99.8 3.3E-18 1.1E-22 165.6 13.8 104 151-257 119-223 (224)
59 1ihg_A Cyclophilin 40; ppiase 99.8 3.2E-17 1.1E-21 173.4 20.6 156 389-545 214-370 (370)
60 2fbn_A 70 kDa peptidylprolyl i 99.7 5E-17 1.7E-21 155.6 19.1 170 374-548 14-188 (198)
61 2pbc_A FK506-binding protein 2 99.7 9.8E-18 3.4E-22 143.2 11.3 93 167-259 4-98 (102)
62 4gcn_A Protein STI-1; structur 99.7 2.3E-16 8E-21 140.1 13.3 115 394-525 4-125 (127)
63 3upv_A Heat shock protein STI1 99.6 1.8E-15 6E-20 133.3 14.2 116 397-528 3-124 (126)
64 4dt4_A FKBP-type 16 kDa peptid 99.6 1.5E-14 5.2E-19 133.3 16.2 84 44-143 24-107 (169)
65 3gyz_A Chaperone protein IPGC; 99.6 1.5E-14 5E-19 132.7 15.3 105 395-514 33-137 (151)
66 3pr9_A FKBP-type peptidyl-prol 99.6 8.5E-15 2.9E-19 133.7 13.0 86 45-143 2-96 (157)
67 3sz7_A HSC70 cochaperone (SGT) 99.6 1.6E-14 5.3E-19 133.7 14.8 120 395-530 8-129 (164)
68 2kr7_A FKBP-type peptidyl-prol 99.6 5.5E-14 1.9E-18 128.1 17.9 83 44-143 6-89 (151)
69 2kfw_A FKBP-type peptidyl-prol 99.5 2.4E-14 8.1E-19 135.4 11.1 82 45-143 3-84 (196)
70 2xcb_A PCRH, regulatory protei 99.5 9.8E-14 3.4E-18 125.2 14.8 120 396-531 16-135 (142)
71 2vgx_A Chaperone SYCD; alterna 99.5 7.3E-14 2.5E-18 127.4 14.0 117 396-528 19-135 (148)
72 1hxv_A Trigger factor; FKBP fo 99.5 6.4E-15 2.2E-19 127.4 6.3 84 44-143 29-112 (113)
73 2k8i_A SLYD, peptidyl-prolyl C 99.5 7.8E-14 2.7E-18 129.3 13.7 69 169-237 3-71 (171)
74 3prb_A FKBP-type peptidyl-prol 99.5 2.4E-14 8.3E-19 138.4 10.7 86 45-143 2-96 (231)
75 3q49_B STIP1 homology and U bo 99.5 7.6E-14 2.6E-18 124.1 13.0 120 397-532 8-132 (137)
76 1ix5_A FKBP; ppiase, isomerase 99.5 2.1E-15 7E-20 137.6 2.4 87 45-143 2-97 (151)
77 2kr7_A FKBP-type peptidyl-prol 99.5 3.7E-13 1.3E-17 122.6 16.7 84 167-257 5-89 (151)
78 4ga2_A E3 SUMO-protein ligase 99.5 9.7E-14 3.3E-18 126.8 12.3 113 397-525 30-143 (150)
79 4dt4_A FKBP-type 16 kDa peptid 99.5 1.3E-13 4.5E-18 127.0 13.1 84 168-258 24-108 (169)
80 1hxv_A Trigger factor; FKBP fo 99.5 2.6E-14 8.8E-19 123.6 6.9 84 167-257 28-112 (113)
81 2kfw_A FKBP-type peptidyl-prol 99.5 3.2E-13 1.1E-17 127.7 13.4 82 169-257 3-84 (196)
82 3cgm_A SLYD, peptidyl-prolyl C 99.5 9.2E-13 3.2E-17 120.5 14.9 77 45-143 3-79 (158)
83 1elw_A TPR1-domain of HOP; HOP 99.5 1.2E-12 4.1E-17 111.9 14.5 114 397-526 3-116 (118)
84 4ga2_A E3 SUMO-protein ligase 99.4 2.9E-13 9.9E-18 123.6 10.6 112 404-531 3-114 (150)
85 1a17_A Serine/threonine protei 99.4 5.6E-12 1.9E-16 115.2 18.0 119 391-525 6-124 (166)
86 3pr9_A FKBP-type peptidyl-prol 99.4 1.1E-13 3.9E-18 126.2 6.3 81 169-257 2-96 (157)
87 4gyw_A UDP-N-acetylglucosamine 99.4 1.3E-12 4.6E-17 149.2 16.6 116 396-527 7-122 (723)
88 2k8i_A SLYD, peptidyl-prolyl C 99.4 2E-12 6.8E-17 119.8 14.7 82 45-143 3-84 (171)
89 3urz_A Uncharacterized protein 99.4 2.3E-12 7.8E-17 124.3 15.8 125 398-527 4-133 (208)
90 2dba_A Smooth muscle cell asso 99.4 3.3E-12 1.1E-16 114.4 15.0 117 397-526 27-143 (148)
91 1hxi_A PEX5, peroxisome target 99.4 8.7E-13 3E-17 115.8 10.7 99 401-514 20-118 (121)
92 1zu2_A Mitochondrial import re 99.4 8E-13 2.7E-17 120.5 10.4 105 410-530 14-139 (158)
93 2vyi_A SGTA protein; chaperone 99.4 7.7E-12 2.6E-16 108.8 16.0 121 392-528 6-126 (131)
94 2lni_A Stress-induced-phosphop 99.4 3.3E-12 1.1E-16 112.0 13.7 114 397-526 15-128 (133)
95 2xev_A YBGF; tetratricopeptide 99.4 4.3E-12 1.5E-16 111.3 13.3 114 400-526 4-120 (129)
96 1elr_A TPR2A-domain of HOP; HO 99.4 5.1E-12 1.8E-16 110.1 13.7 119 396-531 2-127 (131)
97 1ix5_A FKBP; ppiase, isomerase 99.4 6.4E-13 2.2E-17 121.0 6.8 82 169-257 2-97 (151)
98 2pl2_A Hypothetical conserved 99.4 5.8E-12 2E-16 122.3 13.6 114 399-528 6-130 (217)
99 4gyw_A UDP-N-acetylglucosamine 99.3 4.7E-12 1.6E-16 144.7 14.5 116 398-529 43-158 (723)
100 3prb_A FKBP-type peptidyl-prol 99.3 7.8E-13 2.7E-17 127.8 6.6 81 169-257 2-96 (231)
101 2c2l_A CHIP, carboxy terminus 99.3 6E-12 2E-16 127.5 13.3 102 398-514 4-105 (281)
102 3cgm_A SLYD, peptidyl-prolyl C 99.3 1E-11 3.5E-16 113.6 13.4 78 169-258 3-80 (158)
103 4i17_A Hypothetical protein; T 99.3 1.8E-11 6.2E-16 118.9 15.5 101 399-514 8-109 (228)
104 1wao_1 Serine/threonine protei 99.3 9.4E-12 3.2E-16 135.9 14.0 117 395-527 3-119 (477)
105 2h6f_A Protein farnesyltransfe 99.3 1.1E-11 3.8E-16 131.2 12.8 80 448-528 167-246 (382)
106 3k9i_A BH0479 protein; putativ 99.3 4.4E-12 1.5E-16 110.2 8.0 97 410-519 2-98 (117)
107 2h6f_A Protein farnesyltransfe 99.3 1.2E-11 4.2E-16 130.9 12.4 119 396-530 95-214 (382)
108 3urz_A Uncharacterized protein 99.3 3.6E-11 1.2E-15 115.8 14.7 108 403-527 59-201 (208)
109 1na0_A Designed protein CTPR3; 99.3 1.1E-10 3.8E-15 100.4 16.2 113 398-526 9-121 (125)
110 2pl2_A Hypothetical conserved 99.3 5.3E-11 1.8E-15 115.4 15.1 121 398-535 39-170 (217)
111 3vtx_A MAMA; tetratricopeptide 99.3 8.5E-11 2.9E-15 110.0 15.5 134 398-536 5-161 (184)
112 2kck_A TPR repeat; tetratricop 99.2 4E-11 1.4E-15 101.4 11.4 100 400-514 8-110 (112)
113 2e2e_A Formate-dependent nitri 99.2 1.5E-10 5.1E-15 107.8 14.3 113 398-526 44-159 (177)
114 1hh8_A P67PHOX, NCF-2, neutrop 99.2 1.1E-10 3.9E-15 111.6 13.7 132 396-546 4-150 (213)
115 4i17_A Hypothetical protein; T 99.2 1.5E-10 5.1E-15 112.4 14.4 114 400-529 44-166 (228)
116 3ieg_A DNAJ homolog subfamily 99.2 3.1E-10 1.1E-14 116.7 16.6 122 399-532 235-356 (359)
117 3vtx_A MAMA; tetratricopeptide 99.2 4.9E-10 1.7E-14 104.7 16.4 112 399-514 40-174 (184)
118 4gco_A Protein STI-1; structur 99.2 2.1E-10 7.2E-15 101.2 12.6 90 446-536 12-101 (126)
119 3gyz_A Chaperone protein IPGC; 99.2 2.3E-11 7.7E-16 111.3 6.5 89 447-536 36-124 (151)
120 2l6j_A TPR repeat-containing p 99.1 2.1E-11 7.1E-16 103.7 4.4 95 397-506 3-103 (111)
121 1hh8_A P67PHOX, NCF-2, neutrop 99.1 3E-10 1E-14 108.7 12.8 102 398-514 37-154 (213)
122 3uq3_A Heat shock protein STI1 99.1 4E-10 1.4E-14 110.3 13.9 111 398-524 139-255 (258)
123 2gw1_A Mitochondrial precursor 99.1 5.3E-10 1.8E-14 121.4 15.7 116 394-525 2-117 (514)
124 4abn_A Tetratricopeptide repea 99.1 5.4E-10 1.8E-14 121.9 15.0 120 399-534 171-310 (474)
125 1w26_A Trigger factor, TF; cha 99.1 1.3E-10 4.4E-15 124.3 9.8 87 45-147 158-244 (432)
126 1xnf_A Lipoprotein NLPI; TPR, 99.1 1.4E-09 4.9E-14 107.7 16.5 105 396-515 41-145 (275)
127 2vsy_A XCC0866; transferase, g 99.1 9.9E-10 3.4E-14 122.4 16.6 116 398-529 23-138 (568)
128 2fo7_A Synthetic consensus TPR 99.1 1.3E-09 4.5E-14 94.6 13.6 115 400-530 3-117 (136)
129 2kat_A Uncharacterized protein 99.1 2E-09 6.7E-14 92.6 14.5 83 416-513 3-85 (115)
130 3qky_A Outer membrane assembly 99.1 8.6E-10 2.9E-14 109.5 13.7 105 398-514 15-130 (261)
131 2yhc_A BAMD, UPF0169 lipoprote 99.1 1E-09 3.6E-14 106.7 13.9 106 398-515 4-130 (225)
132 4abn_A Tetratricopeptide repea 99.1 9.9E-10 3.4E-14 119.7 15.0 115 398-529 102-226 (474)
133 3as5_A MAMA; tetratricopeptide 99.1 2.4E-09 8.2E-14 98.7 15.5 120 398-533 42-161 (186)
134 2e2e_A Formate-dependent nitri 99.1 4E-10 1.4E-14 104.8 10.0 130 400-546 12-144 (177)
135 2vgx_A Chaperone SYCD; alterna 99.1 3E-10 1E-14 103.2 8.9 89 447-536 21-109 (148)
136 2y4t_A DNAJ homolog subfamily 99.1 2.4E-09 8.3E-14 114.4 17.0 119 400-530 259-377 (450)
137 3uq3_A Heat shock protein STI1 99.0 2.4E-09 8.4E-14 104.6 15.2 131 398-533 79-224 (258)
138 2pzi_A Probable serine/threoni 99.0 3E-10 1E-14 129.6 9.3 118 398-532 433-550 (681)
139 3as5_A MAMA; tetratricopeptide 99.0 2.7E-09 9.4E-14 98.3 14.1 120 397-532 7-126 (186)
140 2pzi_A Probable serine/threoni 99.0 3.9E-10 1.3E-14 128.7 10.0 112 398-526 467-578 (681)
141 4eqf_A PEX5-related protein; a 99.0 2.3E-09 7.9E-14 111.5 14.5 118 403-534 182-299 (365)
142 3qky_A Outer membrane assembly 99.0 4.8E-09 1.6E-13 104.1 16.1 120 398-529 52-198 (261)
143 3ieg_A DNAJ homolog subfamily 99.0 3.8E-09 1.3E-13 108.4 15.7 110 398-523 3-115 (359)
144 3fp2_A TPR repeat-containing p 99.0 1.8E-09 6.1E-14 118.2 13.8 111 388-514 15-125 (537)
145 4eqf_A PEX5-related protein; a 99.0 1.6E-09 5.5E-14 112.7 12.6 102 398-514 213-314 (365)
146 2q7f_A YRRB protein; TPR, prot 99.0 6.3E-09 2.2E-13 100.9 16.0 117 398-530 57-173 (243)
147 2q7f_A YRRB protein; TPR, prot 99.0 2E-09 6.8E-14 104.5 12.3 120 397-532 22-141 (243)
148 3n71_A Histone lysine methyltr 99.0 3.5E-09 1.2E-13 115.3 15.5 138 391-536 302-455 (490)
149 4gcn_A Protein STI-1; structur 99.0 1.2E-09 4.1E-14 96.4 9.6 68 447-514 8-75 (127)
150 3u4t_A TPR repeat-containing p 99.0 1.8E-09 6E-14 107.1 12.0 113 402-527 41-154 (272)
151 1w26_A Trigger factor, TF; cha 99.0 8.5E-10 2.9E-14 117.9 10.3 86 167-258 156-241 (432)
152 1t11_A Trigger factor, TF; hel 99.0 3.3E-10 1.1E-14 119.5 6.8 88 44-147 160-247 (392)
153 3upv_A Heat shock protein STI1 99.0 4.7E-09 1.6E-13 91.6 13.0 88 447-535 4-91 (126)
154 1hxi_A PEX5, peroxisome target 99.0 7.9E-09 2.7E-13 90.3 14.4 95 448-544 18-112 (121)
155 3mkr_A Coatomer subunit epsilo 99.0 3.5E-09 1.2E-13 107.6 13.8 112 399-514 131-268 (291)
156 1fch_A Peroxisomal targeting s 99.0 2.6E-09 9E-14 110.8 13.0 101 399-514 218-318 (368)
157 2fo7_A Synthetic consensus TPR 99.0 4.8E-09 1.6E-13 91.0 12.7 101 399-514 36-136 (136)
158 2y4t_A DNAJ homolog subfamily 99.0 1E-08 3.4E-13 109.6 17.4 104 396-514 24-127 (450)
159 1na3_A Designed protein CTPR2; 99.0 8.5E-09 2.9E-13 83.8 12.8 79 447-526 9-87 (91)
160 2vq2_A PILW, putative fimbrial 99.0 1.1E-08 3.8E-13 97.6 15.6 97 398-509 8-105 (225)
161 3hym_B Cell division cycle pro 99.0 4.7E-09 1.6E-13 106.6 13.5 120 399-525 194-313 (330)
162 2xcb_A PCRH, regulatory protei 98.9 2E-09 6.8E-14 96.6 9.4 88 447-535 18-105 (142)
163 3qou_A Protein YBBN; thioredox 98.9 4.4E-09 1.5E-13 106.6 12.8 118 398-530 117-269 (287)
164 1w3b_A UDP-N-acetylglucosamine 98.9 6.8E-09 2.3E-13 109.0 14.8 128 398-530 169-319 (388)
165 2ho1_A Type 4 fimbrial biogene 98.9 9.4E-09 3.2E-13 100.6 14.8 110 400-525 73-184 (252)
166 1w3b_A UDP-N-acetylglucosamine 98.9 9.8E-09 3.4E-13 107.8 15.9 128 398-530 135-285 (388)
167 2vq2_A PILW, putative fimbrial 98.9 1.1E-08 3.8E-13 97.6 14.9 67 448-514 114-181 (225)
168 1xnf_A Lipoprotein NLPI; TPR, 98.9 1.1E-08 3.8E-13 101.2 15.3 119 403-533 10-128 (275)
169 3u4t_A TPR repeat-containing p 98.9 6.5E-09 2.2E-13 103.0 13.4 115 398-528 74-188 (272)
170 2ho1_A Type 4 fimbrial biogene 98.9 7.5E-09 2.6E-13 101.3 13.6 119 397-531 36-156 (252)
171 3mkr_A Coatomer subunit epsilo 98.9 1.6E-08 5.4E-13 102.7 16.2 69 460-529 179-247 (291)
172 3cv0_A Peroxisome targeting si 98.9 8.5E-09 2.9E-13 104.6 14.2 121 398-533 172-303 (327)
173 2l6j_A TPR repeat-containing p 98.9 1.1E-08 3.9E-13 86.4 12.6 68 447-514 4-71 (111)
174 2hr2_A Hypothetical protein; a 98.9 6.4E-09 2.2E-13 94.9 11.4 89 447-536 11-122 (159)
175 1qqe_A Vesicular transport pro 98.9 5.2E-09 1.8E-13 106.2 12.0 110 396-514 75-191 (292)
176 3ma5_A Tetratricopeptide repea 98.9 4.3E-09 1.5E-13 88.5 9.3 67 447-513 7-73 (100)
177 1fch_A Peroxisomal targeting s 98.9 2.5E-08 8.5E-13 103.3 17.0 133 398-535 132-304 (368)
178 3edt_B KLC 2, kinesin light ch 98.9 6.6E-09 2.3E-13 102.7 12.0 129 396-532 41-185 (283)
179 3hym_B Cell division cycle pro 98.9 1.8E-08 6E-13 102.4 15.4 121 398-534 90-211 (330)
180 3sz7_A HSC70 cochaperone (SGT) 98.9 1.3E-08 4.3E-13 93.5 13.0 90 446-536 10-99 (164)
181 2r5s_A Uncharacterized protein 98.9 4.4E-09 1.5E-13 98.0 9.8 114 401-529 9-157 (176)
182 2kc7_A BFR218_protein; tetratr 98.9 1.4E-09 4.8E-14 90.6 5.6 64 451-514 4-68 (99)
183 4g1t_A Interferon-induced prot 98.9 8.4E-09 2.9E-13 111.2 13.0 122 398-526 51-182 (472)
184 3u3w_A Transcriptional activat 98.9 7.1E-09 2.4E-13 105.1 11.4 107 396-510 153-266 (293)
185 1qqe_A Vesicular transport pro 98.9 8.7E-09 3E-13 104.5 11.5 109 397-514 116-232 (292)
186 2yhc_A BAMD, UPF0169 lipoprote 98.9 2.2E-08 7.6E-13 97.2 13.8 126 398-535 41-203 (225)
187 1na3_A Designed protein CTPR2; 98.8 2E-08 6.7E-13 81.7 11.0 84 397-495 8-91 (91)
188 3qww_A SET and MYND domain-con 98.8 2.2E-08 7.6E-13 107.3 14.3 123 392-522 292-427 (433)
189 1t11_A Trigger factor, TF; hel 98.8 2.9E-09 1E-13 112.2 6.7 87 167-259 159-245 (392)
190 3ro3_A PINS homolog, G-protein 98.8 3.6E-08 1.2E-12 88.3 12.7 108 395-511 6-119 (164)
191 2kc7_A BFR218_protein; tetratr 98.8 3E-08 1E-12 82.4 11.2 61 446-514 33-94 (99)
192 1pc2_A Mitochondria fission pr 98.8 3.7E-08 1.3E-12 88.7 12.1 103 411-529 11-118 (152)
193 3edt_B KLC 2, kinesin light ch 98.8 1.9E-08 6.4E-13 99.4 11.2 109 395-510 82-198 (283)
194 3q49_B STIP1 homology and U bo 98.8 5.3E-08 1.8E-12 85.7 13.0 87 447-534 9-95 (137)
195 3qwp_A SET and MYND domain-con 98.8 4.5E-08 1.5E-12 105.0 14.4 123 396-526 285-420 (429)
196 2vsy_A XCC0866; transferase, g 98.8 3.1E-08 1E-12 110.2 13.7 102 398-514 57-161 (568)
197 3fp2_A TPR repeat-containing p 98.8 4.7E-08 1.6E-12 106.8 14.9 133 396-533 241-395 (537)
198 3cv0_A Peroxisome targeting si 98.8 1.2E-07 4E-12 96.1 16.9 114 405-534 144-258 (327)
199 2kck_A TPR repeat; tetratricop 98.7 3.4E-08 1.1E-12 83.0 9.5 86 447-533 6-94 (112)
200 2ifu_A Gamma-SNAP; membrane fu 98.7 4.6E-08 1.6E-12 99.9 12.1 107 397-514 115-227 (307)
201 3ulq_A Response regulator aspa 98.7 6.2E-08 2.1E-12 101.8 13.4 127 395-530 140-278 (383)
202 1a17_A Serine/threonine protei 98.7 5.9E-08 2E-12 88.1 11.4 98 398-510 47-146 (166)
203 3rkv_A Putative peptidylprolyl 98.7 4.5E-08 1.5E-12 89.6 10.6 89 447-536 11-117 (162)
204 2qfc_A PLCR protein; TPR, HTH, 98.7 3.6E-08 1.2E-12 99.8 10.7 107 397-511 154-267 (293)
205 2xpi_A Anaphase-promoting comp 98.7 7.5E-08 2.6E-12 106.9 14.3 116 401-525 478-593 (597)
206 4a1s_A PINS, partner of inscut 98.7 6.8E-08 2.3E-12 101.8 13.0 125 395-531 45-181 (411)
207 3q15_A PSP28, response regulat 98.7 5.8E-08 2E-12 101.9 12.2 108 396-512 180-292 (378)
208 2ifu_A Gamma-SNAP; membrane fu 98.7 2.6E-08 8.9E-13 101.7 9.1 109 396-514 74-188 (307)
209 2gw1_A Mitochondrial precursor 98.7 5.4E-08 1.8E-12 105.5 11.8 116 401-526 375-493 (514)
210 3u3w_A Transcriptional activat 98.7 5.3E-08 1.8E-12 98.5 11.0 124 398-530 115-250 (293)
211 3ulq_A Response regulator aspa 98.7 8.6E-08 3E-12 100.6 12.6 108 395-511 181-294 (383)
212 1elw_A TPR1-domain of HOP; HOP 98.7 2.4E-07 8.2E-12 78.3 12.9 87 447-534 4-90 (118)
213 3ro3_A PINS homolog, G-protein 98.7 1.4E-07 4.6E-12 84.5 11.4 108 397-513 48-161 (164)
214 2qfc_A PLCR protein; TPR, HTH, 98.7 5.1E-07 1.7E-11 91.2 17.0 123 399-530 116-250 (293)
215 3gw4_A Uncharacterized protein 98.7 1.8E-07 6E-12 88.0 12.6 106 397-511 25-137 (203)
216 3nf1_A KLC 1, kinesin light ch 98.7 7.2E-08 2.5E-12 96.9 10.5 129 396-532 67-211 (311)
217 2lni_A Stress-induced-phosphop 98.6 1.8E-07 6.2E-12 81.2 11.5 88 446-534 15-102 (133)
218 3q15_A PSP28, response regulat 98.6 1.2E-07 4.2E-12 99.4 12.1 132 395-535 138-280 (378)
219 3ro2_A PINS homolog, G-protein 98.6 1.1E-07 3.9E-12 95.9 11.4 105 398-513 5-115 (338)
220 2xpi_A Anaphase-promoting comp 98.6 2.3E-07 7.8E-12 103.0 14.8 120 398-533 373-492 (597)
221 3nf1_A KLC 1, kinesin light ch 98.6 1.3E-07 4.3E-12 95.0 11.6 108 396-510 109-224 (311)
222 1wao_1 Serine/threonine protei 98.6 2.3E-08 7.8E-13 109.0 6.3 102 398-514 40-154 (477)
223 3sf4_A G-protein-signaling mod 98.6 1.5E-07 5E-12 98.5 11.4 105 398-513 9-119 (406)
224 4g1t_A Interferon-induced prot 98.6 1.6E-07 5.5E-12 101.0 11.8 119 398-524 94-217 (472)
225 2xev_A YBGF; tetratricopeptide 98.6 3.1E-07 1.1E-11 79.7 11.4 96 449-545 4-104 (129)
226 2fbn_A 70 kDa peptidylprolyl i 98.6 1.4E-07 4.8E-12 89.3 9.6 89 446-535 37-141 (198)
227 1ouv_A Conserved hypothetical 98.6 1E-06 3.5E-11 87.5 15.7 74 448-526 75-156 (273)
228 2ond_A Cleavage stimulation fa 98.6 4E-07 1.4E-11 92.7 12.9 112 400-526 101-213 (308)
229 2vyi_A SGTA protein; chaperone 98.6 9.1E-07 3.1E-11 76.1 13.3 88 446-534 11-98 (131)
230 2dba_A Smooth muscle cell asso 98.5 5.9E-07 2E-11 79.6 12.2 88 447-535 28-118 (148)
231 2c2l_A CHIP, carboxy terminus 98.5 5.1E-07 1.8E-11 90.9 12.4 84 447-531 4-87 (281)
232 1na0_A Designed protein CTPR3; 98.5 1.2E-06 4.1E-11 74.6 13.0 85 447-532 9-93 (125)
233 3sf4_A G-protein-signaling mod 98.5 4.4E-07 1.5E-11 94.8 12.3 107 397-512 186-298 (406)
234 1dce_A Protein (RAB geranylger 98.5 9.2E-07 3.2E-11 98.3 15.3 114 399-528 64-190 (567)
235 3bee_A Putative YFRE protein; 98.5 9.6E-07 3.3E-11 73.2 11.4 67 447-513 6-75 (93)
236 2ond_A Cleavage stimulation fa 98.5 7.1E-07 2.4E-11 90.9 12.9 87 414-514 80-167 (308)
237 4f3v_A ESX-1 secretion system 98.5 4.9E-07 1.7E-11 90.6 11.1 108 400-522 137-247 (282)
238 2r5s_A Uncharacterized protein 98.5 3.3E-07 1.1E-11 85.1 9.3 108 397-509 39-172 (176)
239 2v5f_A Prolyl 4-hydroxylase su 98.5 1.5E-06 5.3E-11 73.4 12.2 82 447-529 5-93 (104)
240 3gw4_A Uncharacterized protein 98.4 1E-06 3.4E-11 82.8 11.6 109 395-511 63-177 (203)
241 1ihg_A Cyclophilin 40; ppiase 98.4 6.4E-07 2.2E-11 94.1 11.1 92 397-503 272-363 (370)
242 1dce_A Protein (RAB geranylger 98.4 1.5E-06 5.1E-11 96.6 14.6 112 403-530 33-157 (567)
243 3rjv_A Putative SEL1 repeat pr 98.4 1.5E-06 5.2E-11 83.4 12.3 78 447-526 85-172 (212)
244 3ro2_A PINS homolog, G-protein 98.4 8.1E-07 2.8E-11 89.6 10.8 107 397-512 182-294 (338)
245 1elr_A TPR2A-domain of HOP; HO 98.4 1.3E-06 4.5E-11 75.1 10.6 86 447-532 4-95 (131)
246 3k9i_A BH0479 protein; putativ 98.4 8.3E-07 2.8E-11 76.3 8.9 75 396-485 25-99 (117)
247 4a1s_A PINS, partner of inscut 98.4 1.3E-06 4.4E-11 92.0 11.9 106 398-512 223-334 (411)
248 1ouv_A Conserved hypothetical 98.4 3.1E-06 1.1E-10 84.0 13.9 94 398-510 74-179 (273)
249 2v5f_A Prolyl 4-hydroxylase su 98.4 1.7E-06 5.8E-11 73.2 10.1 82 399-488 6-87 (104)
250 3rjv_A Putative SEL1 repeat pr 98.4 1.3E-06 4.6E-11 83.8 10.2 111 398-528 18-137 (212)
251 3dra_A Protein farnesyltransfe 98.4 3.9E-06 1.3E-10 85.5 13.9 113 398-526 67-190 (306)
252 1zu2_A Mitochondrial import re 98.3 1.1E-06 3.7E-11 79.9 8.4 72 458-530 13-94 (158)
253 3dra_A Protein farnesyltransfe 98.3 4.5E-06 1.5E-10 85.1 13.7 103 412-530 124-234 (306)
254 3qou_A Protein YBBN; thioredox 98.3 1.3E-06 4.4E-11 88.2 9.4 108 398-509 151-283 (287)
255 3q7a_A Farnesyltransferase alp 98.3 8.1E-06 2.8E-10 84.3 14.9 103 412-530 68-173 (349)
256 3dss_A Geranylgeranyl transfer 98.3 1.3E-05 4.4E-10 82.3 16.4 100 414-529 90-192 (331)
257 3ma5_A Tetratricopeptide repea 98.3 1.8E-06 6.2E-11 72.1 8.2 80 398-492 7-88 (100)
258 3dss_A Geranylgeranyl transfer 98.3 5.5E-06 1.9E-10 85.1 12.9 104 409-528 40-156 (331)
259 3n71_A Histone lysine methyltr 98.3 1.5E-06 5.3E-11 94.5 8.7 109 395-510 348-464 (490)
260 1klx_A Cysteine rich protein B 98.2 1E-05 3.4E-10 72.1 11.4 89 404-511 31-127 (138)
261 1hz4_A MALT regulatory protein 98.2 1.4E-05 4.9E-10 83.0 14.1 108 397-513 52-167 (373)
262 1nzn_A CGI-135 protein, fissio 98.2 1.5E-05 5E-10 69.1 11.4 102 413-530 16-122 (126)
263 3q7a_A Farnesyltransferase alp 98.1 1.1E-05 3.9E-10 83.2 11.7 110 400-525 90-210 (349)
264 2kat_A Uncharacterized protein 98.1 6.8E-06 2.3E-10 70.0 8.3 81 398-493 19-101 (115)
265 1hz4_A MALT regulatory protein 98.1 1.7E-05 5.8E-10 82.4 12.5 107 398-511 93-204 (373)
266 4f3v_A ESX-1 secretion system 98.1 6.5E-06 2.2E-10 82.4 8.6 130 402-548 106-239 (282)
267 2ooe_A Cleavage stimulation fa 98.0 2.5E-05 8.7E-10 85.7 12.1 112 400-526 323-435 (530)
268 2xm6_A Protein corresponding t 97.9 5E-05 1.7E-09 82.4 12.6 77 447-526 363-450 (490)
269 2ooe_A Cleavage stimulation fa 97.9 9.5E-05 3.3E-09 81.0 14.5 115 415-545 255-384 (530)
270 3o48_A Mitochondria fission 1 97.8 0.00018 6E-09 62.6 12.0 83 447-530 40-126 (134)
271 3ly7_A Transcriptional activat 97.8 0.00015 5.2E-09 74.8 13.3 65 449-514 279-343 (372)
272 1xi4_A Clathrin heavy chain; a 97.8 9E-05 3.1E-09 87.7 12.1 107 400-530 1197-1328(1630)
273 1y8m_A FIS1; mitochondria, unk 97.8 0.0003 1E-08 61.8 12.2 82 447-529 39-124 (144)
274 1klx_A Cysteine rich protein B 97.7 0.00028 9.7E-09 62.5 12.3 94 411-528 8-105 (138)
275 1b89_A Protein (clathrin heavy 97.7 6.7E-05 2.3E-09 79.5 9.3 106 400-531 124-256 (449)
276 3e4b_A ALGK; tetratricopeptide 97.7 0.00015 5.1E-09 78.0 12.0 115 400-526 178-328 (452)
277 3gty_X Trigger factor, TF; cha 97.7 0.00011 3.7E-09 78.3 9.7 76 45-148 155-230 (433)
278 2xm6_A Protein corresponding t 97.6 0.00045 1.6E-08 74.7 14.5 92 400-510 77-180 (490)
279 3u64_A Protein TP_0956; tetrat 97.6 0.00016 5.4E-09 71.9 9.6 89 412-513 177-272 (301)
280 1pc2_A Mitochondria fission pr 97.6 0.00026 9E-09 63.5 10.2 79 398-490 32-114 (152)
281 1xi4_A Clathrin heavy chain; a 97.6 0.0002 6.9E-09 84.8 11.7 106 403-513 1054-1166(1630)
282 4b4t_Q 26S proteasome regulato 97.5 0.00044 1.5E-08 72.9 12.2 118 394-511 51-205 (434)
283 3gty_X Trigger factor, TF; cha 97.5 0.00021 7E-09 76.2 9.5 74 168-259 154-227 (433)
284 3ffl_A Anaphase-promoting comp 97.5 0.00079 2.7E-08 60.9 11.6 117 401-525 23-164 (167)
285 3qwp_A SET and MYND domain-con 97.5 0.00011 3.8E-09 78.5 6.9 95 393-494 324-426 (429)
286 3e4b_A ALGK; tetratricopeptide 97.4 0.00072 2.5E-08 72.6 12.6 91 400-511 250-352 (452)
287 4b4t_Q 26S proteasome regulato 97.4 0.00037 1.3E-08 73.5 10.2 104 398-510 135-245 (434)
288 3qww_A SET and MYND domain-con 97.4 0.00023 7.9E-09 76.0 7.9 75 395-476 337-411 (433)
289 3mv2_B Coatomer subunit epsilo 97.3 0.00087 3E-08 67.8 10.2 92 405-514 183-286 (310)
290 3bee_A Putative YFRE protein; 97.1 0.0012 4E-08 54.3 7.5 68 398-480 6-76 (93)
291 2ff4_A Probable regulatory pro 97.1 0.01 3.5E-07 62.2 16.5 127 397-525 114-254 (388)
292 3u64_A Protein TP_0956; tetrat 96.8 0.0072 2.5E-07 60.0 11.6 62 463-524 179-247 (301)
293 3mv2_B Coatomer subunit epsilo 96.8 0.0086 2.9E-07 60.5 12.2 100 401-513 103-210 (310)
294 1nzn_A CGI-135 protein, fissio 96.5 0.013 4.3E-07 50.7 9.6 43 447-489 74-116 (126)
295 1y8m_A FIS1; mitochondria, unk 96.3 0.023 7.7E-07 49.9 9.8 73 403-489 44-119 (144)
296 3o48_A Mitochondria fission 1 96.2 0.018 6.2E-07 49.9 8.7 44 447-490 78-121 (134)
297 1b89_A Protein (clathrin heavy 96.2 0.0063 2.2E-07 64.4 6.7 147 392-539 142-305 (449)
298 3ffl_A Anaphase-promoting comp 95.9 0.017 5.8E-07 52.2 7.4 95 396-491 61-165 (167)
299 4h7y_A Dual specificity protei 95.9 0.17 6E-06 44.7 13.5 112 395-515 17-128 (161)
300 4gns_B Protein CSD3, chitin bi 94.9 0.18 6.2E-06 56.9 12.9 60 448-507 338-397 (754)
301 4e6h_A MRNA 3'-END-processing 94.6 0.26 9E-06 55.4 13.3 100 450-550 472-574 (679)
302 4e6h_A MRNA 3'-END-processing 94.4 0.16 5.6E-06 57.1 11.1 115 401-515 437-575 (679)
303 3kae_A CDC27, possible protein 93.9 0.63 2.1E-05 41.9 11.4 67 448-514 63-147 (242)
304 1zbp_A Hypothetical protein VP 93.8 0.34 1.2E-05 47.3 10.5 63 456-518 6-68 (273)
305 3ly7_A Transcriptional activat 93.7 0.17 6E-06 52.0 8.7 69 404-489 283-351 (372)
306 3txn_A 26S proteasome regulato 93.3 0.39 1.3E-05 50.1 10.7 99 403-510 104-210 (394)
307 3mkr_B Coatomer subunit alpha; 92.8 0.79 2.7E-05 45.8 11.5 113 401-513 105-230 (320)
308 1ya0_A SMG-7 transcript varian 92.5 0.66 2.3E-05 49.9 11.5 80 448-528 153-232 (497)
309 3mv2_A Coatomer subunit alpha; 92.2 0.55 1.9E-05 47.0 9.5 115 400-514 116-240 (325)
310 4b4t_R RPN7, 26S proteasome re 91.6 0.34 1.2E-05 51.2 7.9 99 401-511 134-238 (429)
311 1zbp_A Hypothetical protein VP 90.7 2.4 8.1E-05 41.4 12.0 64 405-483 4-67 (273)
312 2uy1_A Cleavage stimulation fa 88.7 4.9 0.00017 43.1 14.1 109 400-514 215-353 (493)
313 4gns_B Protein CSD3, chitin bi 88.1 0.72 2.5E-05 52.1 7.2 59 400-473 339-397 (754)
314 2v6y_A AAA family ATPase, P60 87.5 0.62 2.1E-05 36.9 4.5 40 390-429 2-42 (83)
315 4g26_A Pentatricopeptide repea 86.9 6.1 0.00021 42.4 13.5 98 402-513 109-209 (501)
316 4g26_A Pentatricopeptide repea 85.4 11 0.00038 40.4 14.6 92 408-513 80-174 (501)
317 4b4t_P 26S proteasome regulato 85.2 9.7 0.00033 40.2 13.8 106 396-510 135-247 (445)
318 2cpt_A SKD1 protein, vacuolar 84.3 1.7 5.7E-05 36.9 5.8 43 388-430 7-50 (117)
319 2w2u_A Hypothetical P60 katani 81.2 1.5 5.2E-05 34.6 4.1 38 392-429 13-50 (83)
320 2v6x_A Vacuolar protein sortin 80.5 1.8 6E-05 34.4 4.3 41 389-429 4-44 (85)
321 1wfd_A Hypothetical protein 15 79.8 3.5 0.00012 33.3 5.9 39 392-430 9-47 (93)
322 2uy1_A Cleavage stimulation fa 79.5 18 0.00062 38.5 13.5 108 400-528 288-396 (493)
323 3mkq_A Coatomer beta'-subunit; 77.9 6.6 0.00023 44.2 9.9 55 448-502 682-744 (814)
324 3mkq_B Coatomer subunit alpha; 77.5 12 0.0004 34.1 9.3 27 400-426 36-62 (177)
325 3txn_A 26S proteasome regulato 76.7 24 0.00082 36.4 12.7 132 398-530 19-190 (394)
326 3mkq_A Coatomer beta'-subunit; 76.6 4 0.00014 46.0 7.6 19 489-507 744-762 (814)
327 1ya0_A SMG-7 transcript varian 76.2 7.2 0.00025 41.8 8.9 79 400-493 154-232 (497)
328 4a5x_A MITD1, MIT domain-conta 74.1 4.1 0.00014 32.3 4.7 34 396-429 14-47 (86)
329 4fhn_B Nucleoporin NUP120; pro 73.9 3.4 0.00012 49.4 6.1 104 402-505 846-962 (1139)
330 2wb7_A PT26-6P; extra chromoso 71.5 9.7 0.00033 40.0 8.0 93 390-510 421-516 (526)
331 4b4t_S RPN3, 26S proteasome re 70.8 7 0.00024 41.8 7.0 69 446-514 230-303 (523)
332 2ff4_A Probable regulatory pro 68.6 31 0.0011 35.4 11.4 69 453-522 121-211 (388)
333 1qsa_A Protein (soluble lytic 68.2 21 0.00072 39.3 10.5 54 456-509 294-347 (618)
334 3mkq_B Coatomer subunit alpha; 66.2 13 0.00045 33.7 6.9 46 458-508 16-61 (177)
335 2crb_A Nuclear receptor bindin 65.4 5.8 0.0002 31.6 3.7 37 393-429 10-46 (97)
336 4a5x_A MITD1, MIT domain-conta 65.3 34 0.0012 26.9 8.4 27 484-510 19-45 (86)
337 2dl1_A Spartin; SPG20, MIT, st 63.9 17 0.00056 30.4 6.4 74 392-465 16-96 (116)
338 3t5v_B Nuclear mRNA export pro 63.2 24 0.00083 37.2 9.3 104 411-514 139-254 (455)
339 3kae_A CDC27, possible protein 63.1 27 0.00092 31.5 8.0 53 451-508 37-89 (242)
340 4h7y_A Dual specificity protei 62.9 20 0.00068 31.7 7.1 71 410-496 72-142 (161)
341 1wy6_A Hypothetical protein ST 60.8 32 0.0011 29.9 7.8 62 450-511 93-155 (172)
342 3spa_A Mtrpol, DNA-directed RN 59.5 51 0.0017 38.4 11.6 101 399-511 128-231 (1134)
343 2vkj_A TM1634; membrane protei 58.1 24 0.00082 27.8 5.9 31 396-426 51-81 (106)
344 2crb_A Nuclear receptor bindin 55.3 77 0.0026 25.2 9.5 22 485-506 19-40 (97)
345 3lpz_A GET4 (YOR164C homolog); 52.0 1.1E+02 0.0037 30.7 11.4 115 390-504 27-159 (336)
346 4b4t_R RPN7, 26S proteasome re 50.8 19 0.00064 37.7 5.9 63 448-510 132-197 (429)
347 2o8p_A 14-3-3 domain containin 47.1 64 0.0022 30.4 8.2 70 398-475 120-196 (227)
348 2ijq_A Hypothetical protein; s 46.8 74 0.0025 28.2 8.2 68 401-475 35-103 (161)
349 2cpt_A SKD1 protein, vacuolar 45.4 1.3E+02 0.0045 25.0 9.3 15 500-514 44-58 (117)
350 2dl1_A Spartin; SPG20, MIT, st 43.9 31 0.0011 28.7 4.9 43 462-512 18-60 (116)
351 3r9m_A BRO1 domain-containing 42.1 1.1E+02 0.0037 31.2 10.0 111 394-510 110-282 (376)
352 2ymb_A MITD1, MIT domain-conta 40.5 5.9 0.0002 38.2 0.0 41 391-431 16-56 (257)
353 3ax2_A Mitochondrial import re 39.7 30 0.001 26.3 3.9 31 397-427 16-46 (73)
354 2w2u_A Hypothetical P60 katani 39.4 1.3E+02 0.0045 23.2 8.5 12 502-513 47-58 (83)
355 3ax2_A Mitochondrial import re 39.1 73 0.0025 24.2 5.9 29 486-514 22-50 (73)
356 4gq2_M Nucleoporin NUP120; bet 38.7 61 0.0021 37.6 8.2 93 402-494 844-949 (950)
357 3rau_A Tyrosine-protein phosph 38.5 3.2E+02 0.011 27.5 13.1 30 481-510 252-281 (363)
358 2jpu_A ORF C02003 protein; sol 37.7 88 0.003 26.6 6.9 32 395-426 4-35 (129)
359 2rpa_A Katanin P60 ATPase-cont 37.7 1.4E+02 0.0047 23.0 7.8 25 485-509 16-40 (78)
360 2wpv_A GET4, UPF0363 protein Y 37.3 3.1E+02 0.011 27.0 12.5 111 395-505 30-158 (312)
361 4gq2_M Nucleoporin NUP120; bet 37.0 42 0.0014 39.0 6.5 53 453-509 816-868 (950)
362 2npm_A 14-3-3 domain containin 36.6 81 0.0028 30.4 7.3 53 414-474 172-225 (260)
363 4b4t_P 26S proteasome regulato 36.6 2.3E+02 0.0079 29.3 11.7 63 446-508 136-204 (445)
364 2v6y_A AAA family ATPase, P60 35.9 1.5E+02 0.0051 22.9 8.0 15 500-514 37-51 (83)
365 2br9_A 14-3-3E, 14-3-3 protein 35.3 62 0.0021 30.6 6.2 53 414-474 146-200 (234)
366 2vkj_A TM1634; membrane protei 35.0 87 0.003 24.7 5.8 30 482-511 54-83 (106)
367 4fhn_B Nucleoporin NUP120; pro 34.9 50 0.0017 39.2 6.9 53 452-508 817-869 (1139)
368 1om2_A Protein (mitochondrial 34.2 58 0.002 26.1 4.9 39 390-428 12-50 (95)
369 2yin_A DOCK2, dedicator of cyt 33.3 65 0.0022 33.6 6.6 95 400-495 37-140 (436)
370 3spa_A Mtrpol, DNA-directed RN 33.2 2.7E+02 0.0091 32.6 12.0 66 448-513 128-199 (1134)
371 1zb1_A BRO1 protein; AIP1, BRO 33.0 1.3E+02 0.0045 30.7 8.9 29 482-510 258-286 (392)
372 3lvg_A Clathrin heavy chain 1; 32.3 0.12 4.2E-06 54.7 -14.1 100 402-530 148-277 (624)
373 2cfu_A SDSA1; SDS-hydrolase, l 32.3 1.4E+02 0.0048 32.9 9.6 44 452-495 454-497 (658)
374 3t5x_A PCI domain-containing p 32.2 84 0.0029 28.9 6.6 53 446-498 13-70 (203)
375 3uzd_A 14-3-3 protein gamma; s 31.7 77 0.0026 30.2 6.2 52 414-473 147-200 (248)
376 1wfd_A Hypothetical protein 15 30.7 2E+02 0.0067 22.7 9.5 14 500-513 41-54 (93)
377 1o9d_A 14-3-3-like protein C; 30.3 83 0.0028 30.3 6.2 53 414-474 151-205 (260)
378 3eab_A Spastin; spastin, MIT, 30.3 1.1E+02 0.0036 24.2 5.7 67 394-460 12-85 (89)
379 3ubw_A 14-3-3E, 14-3-3 protein 30.2 85 0.0029 30.2 6.2 52 415-474 173-226 (261)
380 2cfu_A SDSA1; SDS-hydrolase, l 30.1 71 0.0024 35.3 6.7 52 479-531 447-498 (658)
381 3c3r_A Programmed cell death 6 28.3 2.7E+02 0.0091 28.2 10.2 30 481-510 275-304 (380)
382 2xs1_A Programmed cell death 6 27.6 2.6E+02 0.0089 31.0 10.8 30 481-510 260-289 (704)
383 3myv_A SUSD superfamily protei 27.5 1.2E+02 0.004 31.7 7.6 30 446-475 189-218 (454)
384 3t5x_A PCI domain-containing p 26.9 1.3E+02 0.0045 27.5 6.9 29 484-512 17-45 (203)
385 2ijq_A Hypothetical protein; s 26.9 2.5E+02 0.0085 24.8 8.3 58 453-510 38-104 (161)
386 3qnk_A Putative lipoprotein; a 26.8 3.3E+02 0.011 28.7 11.2 90 416-509 82-210 (517)
387 3iqu_A 14-3-3 protein sigma; s 26.6 96 0.0033 29.3 5.9 53 414-474 149-203 (236)
388 3kez_A Putative sugar binding 25.7 1.2E+02 0.0042 31.6 7.4 30 446-475 195-224 (461)
389 2xze_A STAM-binding protein; h 25.7 58 0.002 28.4 3.9 46 388-433 30-75 (146)
390 2rkl_A Vacuolar protein sortin 25.4 61 0.0021 22.9 3.2 40 390-429 12-51 (53)
391 3htx_A HEN1; HEN1, small RNA m 25.1 60 0.0021 37.0 4.8 64 287-350 562-649 (950)
392 1om2_A Protein (mitochondrial 24.3 1.1E+02 0.0038 24.5 4.9 27 487-513 26-52 (95)
393 2v6x_A Vacuolar protein sortin 24.0 2.4E+02 0.0084 21.5 9.4 17 493-509 25-41 (85)
394 3mcx_A SUSD superfamily protei 23.9 1.3E+02 0.0044 31.6 7.1 31 446-476 201-231 (477)
395 4abx_A DNA repair protein RECN 22.6 2.9E+02 0.01 24.4 8.3 48 466-513 75-122 (175)
396 2zan_A Vacuolar protein sortin 22.3 19 0.00063 37.9 0.0 39 393-431 6-44 (444)
397 3efz_A 14-3-3 protein; 14-3-3, 21.8 1E+02 0.0034 29.8 5.0 54 414-475 168-225 (268)
398 3myv_A SUSD superfamily protei 20.8 1.8E+02 0.0062 30.2 7.4 47 463-509 164-218 (454)
399 3lew_A SUSD-like carbohydrate 20.5 1.8E+02 0.006 30.8 7.3 31 446-476 202-232 (495)
400 2rpa_A Katanin P60 ATPase-cont 20.3 88 0.003 24.0 3.5 27 449-475 14-40 (78)
No 1
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=100.00 E-value=1.6e-62 Score=516.89 Aligned_cols=343 Identities=32% Similarity=0.531 Sum_probs=212.4
Q ss_pred CceecCCceEEEEEecCCCCCCCCCCCEEEEEEEEEEcCCcEEEeeccCCCCCCcceEEEeCCCccchhHHhhcCCCCCC
Q 006908 23 RMKIVPGSLMKAVMRPGGGDSTPSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTMLKG 102 (626)
Q Consensus 23 ~~~~~~~gv~~~i~~~G~G~~~p~~gd~V~v~y~~~~~dG~~~~st~~~~~~~~~p~~~~lg~~~~~~gle~~l~~m~~G 102 (626)
.+.++++||+|+++++|+|..+|..||.|+|||++++.||++|+||+. .+.|+.|.+|.+++++||+++|.+|++|
T Consensus 5 ~~~~~~~Gl~~~i~~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~----~~~p~~~~lG~g~~i~g~e~~l~gm~~G 80 (356)
T 3jxv_A 5 ENEIGKQGLKKKLLKEGEGWDTPEVGDEVEVHYTGTLLDGKKFDSSRD----RDDTFKFKLGQGQVIKGWDQGIKTMKKG 80 (356)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cceECCCCeEEEEEEeecCCccCCCCCEEEEEEEEEECCCCEEEEccc----CCCcEEEEeCCCccchHHHHHHhcCCCC
Confidence 456899999999999999976699999999999999999999999986 6689999999999999999999999999
Q ss_pred cEEEEEeeccccccCCCCCCCCCCCCCCCceEEEEEEeeeecccccccccccEEEEEeecCCCcCCCCCCCeEEEEEEEE
Q 006908 103 EVSMFKMKPQMHYGEDDCPVAAPSTFPKDEELHFEIEMIDFAKAKIIADDFGVVKKVINEGQGWETPRAPYEVKAWISAK 182 (626)
Q Consensus 103 e~~~~~ip~~~~~g~~~~~~~~~~~i~~~~~lv~~v~l~~~~~~~~v~~D~~v~~~i~~~G~g~~~~~~g~~V~v~y~~~ 182 (626)
++++|+|||+++||..+.+ +.|||+++|+|+|+|++|.+..++..|.++.++++++|.|+.+|..|+.|+|||+++
T Consensus 81 e~~~~~ip~~~aYG~~g~~----~~Ip~~~~l~f~vel~~~~~~~di~~D~~~~k~i~~~G~g~~~p~~g~~V~v~y~g~ 156 (356)
T 3jxv_A 81 ENALFTIPPELAYGESGSP----PTIPANATLQFDVELLSWTSVRDIAKDGGIFKKILKEGDKWENPKDPDEVFVKYEAR 156 (356)
T ss_dssp -----------------------------------------CCEEETTSSSSEEEEEEECCBSSCCCCTTCEEEEEEEEE
T ss_pred CEEEEEEChHHhCCCCCCC----CCcCCCCEEEEEeeEEeeecccccccCceeEEEEEecCcccCCCCCCCEEEEEEEEE
Confidence 9999999999999999885 689999999999999999988889999999999999999999999999999999999
Q ss_pred eCCCcEEEecCCCccEEEEcCCCCccchHHHhhccCCCCcEEEEEEeCCccCCCCCCC------CCCCcceEEEEEEEee
Q 006908 183 TGDGKLILSHREGEPYFFTFGKSEVPKGLEMGIGTMTREEKAVIYVTSQYLTPSPLMP------VVEGCEEVHFEVELVH 256 (626)
Q Consensus 183 ~~~g~~~~s~~~~~p~~~~~g~g~~~~gle~~l~~mk~Ge~~~~~v~~~~~~g~~~~~------~ip~~~~l~~~v~l~~ 256 (626)
+.||++|+++ .++.|.+|.+++|+||+.||.+|++||+++|+|||+++||+.+.+ .||++++|+|+|+|++
T Consensus 157 l~dgt~~~~~---~~~~f~~g~~~v~~gl~~~l~~m~~GE~~~~~v~p~~~yg~~G~~~~~~~~~ip~~~~l~~~vel~~ 233 (356)
T 3jxv_A 157 LEDGTVVSKS---EGVEFTVKDGHLCPALAKAVKTMKKGEKVLLAVKPQYGFGEMGRPAAGEGGAVPPNASLVIDLELVS 233 (356)
T ss_dssp ETTSCEEEEE---EEEEEEGGGCSSSHHHHHHHTTCCBTCEEEEEECGGGTTTTTCBCCCC--CCBCTTCCEEEEEEEEE
T ss_pred ECCCCEEecc---CCEEEEeCCCCcchHHHHHHhhCCCCCEEEEEEChHhhcCCCCCCcccccccCCCCcEEEEEEEEEE
Confidence 9999999987 489999999999999999999999999999999999999976543 5999999999999999
Q ss_pred EEeeeeecCCCcEEEEEeeCCCCCCCCCCCCCCCeEEEEEEEEEecCCCcEEEeeccCCCCCCEEEEcCCCcchhhHHHH
Q 006908 257 LIQVRDMLGDGRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMC 336 (626)
Q Consensus 257 ~~~~~d~~~dg~v~k~il~~G~G~~~~~~p~~~~~V~v~y~~~~~~~~g~~~~dt~~~~~~~p~~f~lG~~~v~~gle~~ 336 (626)
|.++.|++.|++++++++++|.|.. .|..|+.|+|||+|++.| |++|+++... +++|+.|.+|.+++++||+.+
T Consensus 234 ~~~v~dv~~d~~~~~~i~~~g~g~~---~~~~gd~V~v~y~g~l~d--G~~fd~~~~~-~~~p~~f~~G~g~~i~G~e~~ 307 (356)
T 3jxv_A 234 WKTVTEIGDDKKILKKVLKEXEGYE---RPNEGAVVTVKITGKLQD--GTVFLKKGHD-EQEPFEFKTDEEAVIEGLDRA 307 (356)
T ss_dssp EECEEEESTTCCEEEEEEECCBSSC---CCCTTCEEEEEEEEEESS--SCEEEEESCT-TSCCCEEETTTTSSCHHHHHH
T ss_pred EecccccccccceeEEeeecccccC---CCCCCCEEEEEEEEEECC--CCEEeecccc-CCcCEEEEECCCccchHHHHH
Confidence 9999999999999999999999953 368999999999999976 8999666444 578999999999999999999
Q ss_pred hhcCCCCCEEEEEecCCCccccCCC--CCCCCCCcceeeeeeeccccc
Q 006908 337 VRLMLPGEIALVTCPPDYAYDKFLR--PANVPEGAHIQWEIELLGFEK 382 (626)
Q Consensus 337 l~~M~~GE~~~~~i~~~~ayg~~~~--~~~ip~~~~l~~~vel~~~~~ 382 (626)
|.+|++||++.|+|||.+|||..+. ...||++++++|+|+|++|..
T Consensus 308 l~gm~~Ge~~~v~ip~~~aYG~~~~~~~~~Ip~~~~l~f~vel~~~~~ 355 (356)
T 3jxv_A 308 VLNMKKGEVALVTIPPEYAYGSTESKQDAIVPPNSTVIYEVELVSFVK 355 (356)
T ss_dssp HTTCCBTCEEEEEECGGGTTTTSCEESSSEECTTCCEEEEEEEEEEEC
T ss_pred HhCCCCCCEEEEEEChHHccCCCCcCCCCcCCcCCeEEEEEEEEEEEc
Confidence 9999999999999999999998873 356999999999999998864
No 2
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=100.00 E-value=1.1e-54 Score=474.94 Aligned_cols=388 Identities=29% Similarity=0.480 Sum_probs=322.8
Q ss_pred ccccEEEEEeecCCCcCCCCCCCeEEEEEEEEeCCCcEEEecC-CCccEEEEcCCCCccchHHHhhccCCCCcEEEEEEe
Q 006908 151 DDFGVVKKVINEGQGWETPRAPYEVKAWISAKTGDGKLILSHR-EGEPYFFTFGKSEVPKGLEMGIGTMTREEKAVIYVT 229 (626)
Q Consensus 151 ~D~~v~~~i~~~G~g~~~~~~g~~V~v~y~~~~~~g~~~~s~~-~~~p~~~~~g~g~~~~gle~~l~~mk~Ge~~~~~v~ 229 (626)
.|+|+.++++++|.|...|..||.|+|||++++.+|++|+|+. .+.|+.|.+|.|++|+||+++|.+|++||+++|+||
T Consensus 29 ~~~g~~~~~~~~G~g~~~~~~gd~v~v~y~~~~~~g~~~dss~~~~~p~~~~~g~~~~i~g~~~~l~~m~~Ge~~~~~i~ 108 (457)
T 1kt0_A 29 KDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKRGEICHLLCK 108 (457)
T ss_dssp ----CEEEC--------CCCBTCEEEEEEEEEC-----CBC------CEEEETTSTTSCHHHHHHHTTCCTTCEEEEEEC
T ss_pred CCCcEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCEEeccCCCCCCeEEEeCCcchhhHHHHHHhhCCCCCEEEEEEC
Confidence 6889999999999996669999999999999988999999885 568999999999999999999999999999999999
Q ss_pred CCccCCCCC-CCCCCCcceEEEEEEEeeEEeeeeecCCCcEEEEEeeCCCCCCCCCCCCCCCeEEEEEEEEEecCCCcEE
Q 006908 230 SQYLTPSPL-MPVVEGCEEVHFEVELVHLIQVRDMLGDGRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVF 308 (626)
Q Consensus 230 ~~~~~g~~~-~~~ip~~~~l~~~v~l~~~~~~~d~~~dg~v~k~il~~G~G~~~~~~p~~~~~V~v~y~~~~~~~~g~~~ 308 (626)
|+++||..+ ++.||++++++|+|+|++|... +++.||+++++++++|.|.. +|..|+.|+|||+|++ + |.+|
T Consensus 109 ~~~~yg~~g~~~~i~~~~~l~~~v~l~~~~~~-~~~~dg~~~k~i~~~g~~~~---~p~~g~~V~v~y~g~~-~--g~~f 181 (457)
T 1kt0_A 109 PEYAYGSAGSLPKIPSNATLFFEIELLDFKGE-DLFEDGGIIRRTKRKGEGYS---NPNEGATVEIHLEGRC-G--GRMF 181 (457)
T ss_dssp GGGTTTTTCBTTTBCTTCCEEEEEEEEEEECE-ETTSSSSEEEEEEECCBCSC---CCCTTCEEEEEEEEEE-T--TEEE
T ss_pred hHHhccccCCCCCCCCCCcEEEEEeeceeecc-cccCCcceEEEEEecCCCCC---CCCCCCEEEEEEEEEe-C--CeEE
Confidence 999999764 3679999999999999999764 78899999999999998863 4789999999999998 4 7777
Q ss_pred EeeccCCCCCCEEEEcCCCc---chhhHHHHhhcCCCCCEEEEEecCCCccccCCCCC-CCCCCcceeeeeeecccccCC
Q 006908 309 YDTRVDNDGQPLEFSSGEGL---VPEGFEMCVRLMLPGEIALVTCPPDYAYDKFLRPA-NVPEGAHIQWEIELLGFEKPK 384 (626)
Q Consensus 309 ~dt~~~~~~~p~~f~lG~~~---v~~gle~~l~~M~~GE~~~~~i~~~~ayg~~~~~~-~ip~~~~l~~~vel~~~~~~~ 384 (626)
++ +++.|.+|+|. ++++|+.|+..|+.||++.|.++|.++|+..|.+. .||+++.+.|.+.|.++....
T Consensus 182 -~~------~~~~f~~g~g~~~~v~~~~e~al~~~~~ge~~~l~i~P~~ay~~~g~~~~~ip~~~~l~y~~~l~~~~~A~ 254 (457)
T 1kt0_A 182 -DC------RDVAFTVGEGEDHDIPIGIDKALEKMQREEQCILYLGPRYGFGEAGKPKFGIEPNAELIYEVTLKSFEKAK 254 (457)
T ss_dssp -EE------EEEEEETTCGGGGTCCHHHHHHHTTCCBTCEEEEEECGGGTTCSSCBGGGTBCTTCCEEEEEEEEEEECCC
T ss_pred -ec------CceEEEeCCCccccCChHHHHHHHhCCCCCEEEEEECcccccCCCCCcccCCCCCCEEEEEhhhhhcccCc
Confidence 44 25899999774 89999999999999999999999999999998654 599999999999999999988
Q ss_pred CCCCCChhhHHHHHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHH
Q 006908 385 DWTGLSFDGIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECR 464 (626)
Q Consensus 385 ~~~~~~~~e~~~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~ 464 (626)
..+.+..+.....+..++.+|+.+|+.|+|.+|+..|++|+.+.+......+++......+...+|+|+|.||+++++|.
T Consensus 255 ~~~~~~~~~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~ 334 (457)
T 1kt0_A 255 ESWEMDTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYT 334 (457)
T ss_dssp CGGGSCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHH
T ss_pred chhhcCHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHH
Confidence 88888999999999999999999999999999999999999965543333345556677778899999999999999999
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Q 006908 465 KSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQEVESKARKQFKGLF 544 (626)
Q Consensus 465 ~A~~~~~~aL~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~ 544 (626)
+|+.+|.+||+++|+++++||++|.+|..+|+|++|+.+|++|++++|++ ..+...|..+...+.+..++++..|++||
T Consensus 335 ~A~~~~~~al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~-~~a~~~l~~~~~~~~~~~~a~~~~~~~~f 413 (457)
T 1kt0_A 335 KAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQN-KAARLQISMCQKKAKEHNERDRRIYANMF 413 (457)
T ss_dssp HHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC-----CHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999997 68999999999999999999999999999
Q ss_pred cCCCCCccc
Q 006908 545 DKKPGEISE 553 (626)
Q Consensus 545 ~~~~~~~~~ 553 (626)
.+.......
T Consensus 414 ~k~~~~d~~ 422 (457)
T 1kt0_A 414 KKFAEQDAK 422 (457)
T ss_dssp ---------
T ss_pred hhhhhcccc
Confidence 887655443
No 3
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=100.00 E-value=2.1e-42 Score=377.81 Aligned_cols=378 Identities=21% Similarity=0.319 Sum_probs=271.2
Q ss_pred cCcee--cCCceEEEEEecCCCCCCCCCCCEEEEEEEEEEcCCcEEEeeccCCCCCCcceEEEeCCCccchhHHhhcCCC
Q 006908 22 RRMKI--VPGSLMKAVMRPGGGDSTPSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTM 99 (626)
Q Consensus 22 ~~~~~--~~~gv~~~i~~~G~G~~~p~~gd~V~v~y~~~~~dG~~~~st~~~~~~~~~p~~~~lg~~~~~~gle~~l~~m 99 (626)
..+++ +++||.|+|+++|+|..+|..||.|+|||++++.||++|+||+. .+.|+.|.+|.+++++||+++|.+|
T Consensus 22 ~~~~~~~~~~g~~~~~~~~G~g~~~~~~gd~v~v~y~~~~~~g~~~dss~~----~~~p~~~~~g~~~~i~g~~~~l~~m 97 (457)
T 1kt0_A 22 GEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHD----RNEPFVFSLGKGQVIKAWDIGVATM 97 (457)
T ss_dssp -----------CEEEC--------CCCBTCEEEEEEEEEC-----CBC----------CEEEETTSTTSCHHHHHHHTTC
T ss_pred cccccCCCCCcEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCEEeccCC----CCCCeEEEeCCcchhhHHHHHHhhC
Confidence 34566 89999999999999987799999999999999889999999986 6789999999999999999999999
Q ss_pred CCCcEEEEEeeccccccCCCCCCCCCCCCCCCceEEEEEEeeeecccccccccccEEEEEeecCCCcCCCCCCCeEEEEE
Q 006908 100 LKGEVSMFKMKPQMHYGEDDCPVAAPSTFPKDEELHFEIEMIDFAKAKIIADDFGVVKKVINEGQGWETPRAPYEVKAWI 179 (626)
Q Consensus 100 ~~Ge~~~~~ip~~~~~g~~~~~~~~~~~i~~~~~lv~~v~l~~~~~~~~v~~D~~v~~~i~~~G~g~~~~~~g~~V~v~y 179 (626)
++|++++|+|||+++||..|++ +.||++++++|+|+|++|... ++..|.+++++++++|.|+..|..|+.|+|||
T Consensus 98 ~~Ge~~~~~i~~~~~yg~~g~~----~~i~~~~~l~~~v~l~~~~~~-~~~~dg~~~k~i~~~g~~~~~p~~g~~V~v~y 172 (457)
T 1kt0_A 98 KRGEICHLLCKPEYAYGSAGSL----PKIPSNATLFFEIELLDFKGE-DLFEDGGIIRRTKRKGEGYSNPNEGATVEIHL 172 (457)
T ss_dssp CTTCEEEEEECGGGTTTTTCBT----TTBCTTCCEEEEEEEEEEECE-ETTSSSSEEEEEEECCBCSCCCCTTCEEEEEE
T ss_pred CCCCEEEEEEChHHhccccCCC----CCCCCCCcEEEEEeeceeecc-cccCCcceEEEEEecCCCCCCCCCCCEEEEEE
Confidence 9999999999999999998875 789999999999999999754 45678899999999999999999999999999
Q ss_pred EEEeCCCcEEEecCCCccEEEEcCCC---CccchHHHhhccCCCCcEEEEEEeCCccCCCCCCC--CCCCcceEEEEEEE
Q 006908 180 SAKTGDGKLILSHREGEPYFFTFGKS---EVPKGLEMGIGTMTREEKAVIYVTSQYLTPSPLMP--VVEGCEEVHFEVEL 254 (626)
Q Consensus 180 ~~~~~~g~~~~s~~~~~p~~~~~g~g---~~~~gle~~l~~mk~Ge~~~~~v~~~~~~g~~~~~--~ip~~~~l~~~v~l 254 (626)
++++ +|++|++. ++.|.+|.| .++++|+.||..|++|+.+.|.++|.++|+..+.. .||++..+.|.+.+
T Consensus 173 ~g~~-~g~~f~~~----~~~f~~g~g~~~~v~~~~e~al~~~~~ge~~~l~i~P~~ay~~~g~~~~~ip~~~~l~y~~~l 247 (457)
T 1kt0_A 173 EGRC-GGRMFDCR----DVAFTVGEGEDHDIPIGIDKALEKMQREEQCILYLGPRYGFGEAGKPKFGIEPNAELIYEVTL 247 (457)
T ss_dssp EEEE-TTEEEEEE----EEEEETTCGGGGTCCHHHHHHHTTCCBTCEEEEEECGGGTTCSSCBGGGTBCTTCCEEEEEEE
T ss_pred EEEe-CCeEEecC----ceEEEeCCCccccCChHHHHHHHhCCCCCEEEEEECcccccCCCCCcccCCCCCCEEEEEhhh
Confidence 9988 89999973 699999977 48999999999999999999999999999987653 58899999999999
Q ss_pred eeEEeeeeecCCCcEEEEEeeCCCCCCCCCCCCCCCeEEEEEEEEEecCCCcEEEeeccCCCCCCEEEEcCC-CcchhhH
Q 006908 255 VHLIQVRDMLGDGRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGE-GLVPEGF 333 (626)
Q Consensus 255 ~~~~~~~d~~~dg~v~k~il~~G~G~~~~~~p~~~~~V~v~y~~~~~~~~g~~~~dt~~~~~~~p~~f~lG~-~~v~~gl 333 (626)
.++.+..+.+.-. +. .. |. .... ...-|... |..|+ ..-+..+
T Consensus 248 ~~~~~A~~~~~~~------~~----~~----~~---~a~~------~~~~G~~~-------------~~~g~~~~A~~~y 291 (457)
T 1kt0_A 248 KSFEKAKESWEMD------TK----EK----LE---QAAI------VKEKGTVY-------------FKGGKYMQAVIQY 291 (457)
T ss_dssp EEEECCCCGGGSC------HH----HH----HH---HHHH------HHHHHHHH-------------HHTTCHHHHHHHH
T ss_pred hhcccCcchhhcC------HH----HH----HH---HHHH------HHHHHHHH-------------HhCCCHHHHHHHH
Confidence 9986543221000 00 00 00 0000 00000000 01111 0122233
Q ss_pred HHHhhcCCCCCEEEEEecCCCccccCCCCCCCCCCcceeeeeeecccccCCCCCCCChhhHHHHHHHHHhhhchhhcccc
Q 006908 334 EMCVRLMLPGEIALVTCPPDYAYDKFLRPANVPEGAHIQWEIELLGFEKPKDWTGLSFDGIMDEAEKIRVTGNRLFKEGK 413 (626)
Q Consensus 334 e~~l~~M~~GE~~~~~i~~~~ayg~~~~~~~ip~~~~l~~~vel~~~~~~~~~~~~~~~e~~~~a~~~k~~Gn~~f~~g~ 413 (626)
+.++.... .. ..+ . .....+.....+..+.++|..+++.|+
T Consensus 292 ~~Al~~~p-----------~~--------------~~~--~------------~~~~~~~~~~~~~~~~nla~~~~~~g~ 332 (457)
T 1kt0_A 292 GKIVSWLE-----------ME--------------YGL--S------------EKESKASESFLLAAFLNLAMCYLKLRE 332 (457)
T ss_dssp HHHHHHHT-----------TC--------------CSC--C------------HHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhc-----------cc--------------ccC--C------------hHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 33332110 00 000 0 000001112246788899999999999
Q ss_pred HHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 006908 414 FELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMA 493 (626)
Q Consensus 414 ~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~~~ka~~~~g~a~~~ 493 (626)
|++|+..|++||. +.|.+ ..+|+|+|.||+++++|.+|+.+|.+||+++|++..+++.++.++..
T Consensus 333 ~~~A~~~~~~al~----~~p~~-----------~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~ 397 (457)
T 1kt0_A 333 YTKAVECCDKALG----LDSAN-----------EKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKK 397 (457)
T ss_dssp HHHHHHHHHHHHH----HSTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh----cCCcc-----------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 9999999999999 56665 56899999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHH
Q 006908 494 LGEFEEAQRD 503 (626)
Q Consensus 494 lg~~~eA~~~ 503 (626)
++++++|.+.
T Consensus 398 ~~~~~~a~~~ 407 (457)
T 1kt0_A 398 AKEHNERDRR 407 (457)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999988754
No 4
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=100.00 E-value=4.7e-40 Score=332.45 Aligned_cols=228 Identities=25% Similarity=0.418 Sum_probs=208.2
Q ss_pred cCcee--cCCceEEEEEecCCCCCCCCCCCEEEEEEEEEEcCCcEEEeeccCCCCCCcceEEEeCCCccchhHHhhcCCC
Q 006908 22 RRMKI--VPGSLMKAVMRPGGGDSTPSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTM 99 (626)
Q Consensus 22 ~~~~~--~~~gv~~~i~~~G~G~~~p~~gd~V~v~y~~~~~dG~~~~st~~~~~~~~~p~~~~lg~~~~~~gle~~l~~m 99 (626)
+.+++ +++||+|+++++|+|..+|..||.|+|||++++.||++|++|+. .+.|+.|.+|.+++++||+++|.+|
T Consensus 42 ~~di~~~~~~gl~~~vl~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~----~~~p~~f~lG~g~vi~G~e~aL~gm 117 (280)
T 1q1c_A 42 GVDISPKQDEGVLKVIKREGTGTEMPMIGDRVFVHYTGWLLDGTKFDSSLD----RKDKFSFDLGKGEVIKAWDIAIATM 117 (280)
T ss_dssp CEECCSSCSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETTSCEEEESTT----SSSCEEEETTTTSSCHHHHHHHTTC
T ss_pred ccccccCCCCceEEEEEeCCCCCcCCCCCCEEEEEEEEEECCCCEEEeccc----CCCCEEEEECCcChhHHHHHHHhcC
Confidence 44666 79999999999999987799999999999999889999999986 5689999999999999999999999
Q ss_pred CCCcEEEEEeeccccccCCCCCCCCCCCCCCCceEEEEEEeeeeccccccc--ccccEEEEEeecCCCcCCCCCCCeEEE
Q 006908 100 LKGEVSMFKMKPQMHYGEDDCPVAAPSTFPKDEELHFEIEMIDFAKAKIIA--DDFGVVKKVINEGQGWETPRAPYEVKA 177 (626)
Q Consensus 100 ~~Ge~~~~~ip~~~~~g~~~~~~~~~~~i~~~~~lv~~v~l~~~~~~~~v~--~D~~v~~~i~~~G~g~~~~~~g~~V~v 177 (626)
++|++++|+|||+++||..+.+ +.||++++++|+|+|+++... ++. .|.++.++++++|.|+..|+.||.|+|
T Consensus 118 ~~Ge~~~v~ipp~~aYG~~g~~----~~Ip~~~~lvf~Vel~~i~~~-~~~~~~d~gl~~~il~~G~G~~~~~~gd~V~i 192 (280)
T 1q1c_A 118 KVGEVCHITCKPEYAYGSAGSP----PKIPPNATLVFEVELFEFKGE-DLTEEEDGGIIRRIQTRGEGYAKPNEGAIVEV 192 (280)
T ss_dssp CTTCEEEEEECGGGTTTTTCBT----TTBCTTCCEEEEEEEEEEECE-ECCTTCSSSEEEEEEECCSCSCCCCTTCEEEE
T ss_pred CCCCEEEEEECcHHhCCCcCcc----CCCCCCCcEEEEEEeeeeccc-ccccccccceeEEeeecccccccccCCceEEE
Confidence 9999999999999999998875 789999999999999999754 344 788999999999999778999999999
Q ss_pred EEEEEeCCCcEEEecCCCccEEEEcCCCC---ccchHHHhhccCCCCcEEEEEEeCCccCCCCCCC--CCCCcceEEEEE
Q 006908 178 WISAKTGDGKLILSHREGEPYFFTFGKSE---VPKGLEMGIGTMTREEKAVIYVTSQYLTPSPLMP--VVEGCEEVHFEV 252 (626)
Q Consensus 178 ~y~~~~~~g~~~~s~~~~~p~~~~~g~g~---~~~gle~~l~~mk~Ge~~~~~v~~~~~~g~~~~~--~ip~~~~l~~~v 252 (626)
||+++. +|++|++ .|+.|.+|.|+ +|+||+++|.+|++||+++|.|||+++||..+.+ .||++++++|+|
T Consensus 193 ~y~g~~-dG~~fd~----~~~~f~lG~g~~~~~i~G~e~~l~gmk~Ge~~~v~ip~~~~yG~~~~~~~~IP~~~~l~f~V 267 (280)
T 1q1c_A 193 ALEGYY-KDKLFDQ----RELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLKPSYAFGSVGKEKFQIPPNAELKYEL 267 (280)
T ss_dssp EEEEEE-TTEEEEE----EEEEEETTCGGGGTCCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCBGGGTBCTTCCEEEEE
T ss_pred EEEEEe-CCEEEec----CCeEEEecCCcccccchhHHHHHhCCCCCcEEEEEEChhHcCCcCCCccCccCCCCeEEEEE
Confidence 999987 9999997 48999999997 5999999999999999999999999999987643 499999999999
Q ss_pred EEeeEEeeeee
Q 006908 253 ELVHLIQVRDM 263 (626)
Q Consensus 253 ~l~~~~~~~d~ 263 (626)
+|+++.+.+|.
T Consensus 268 ~L~~i~~~~~~ 278 (280)
T 1q1c_A 268 HLKSFEKAKES 278 (280)
T ss_dssp EEEEEECCCC-
T ss_pred EEEEEeCCCCC
Confidence 99999877654
No 5
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=100.00 E-value=4.7e-38 Score=330.50 Aligned_cols=227 Identities=27% Similarity=0.452 Sum_probs=210.0
Q ss_pred ceecCCceEEEEEecCCCCCCCCCCCEEEEEEEEEEcCCcEEEeeccCCCCCCcceEEEeCCCccchhHHhhcCCCCCCc
Q 006908 24 MKIVPGSLMKAVMRPGGGDSTPSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTMLKGE 103 (626)
Q Consensus 24 ~~~~~~gv~~~i~~~G~G~~~p~~gd~V~v~y~~~~~dG~~~~st~~~~~~~~~p~~~~lg~~~~~~gle~~l~~m~~Ge 103 (626)
++..+.++.++++++|.|..+|..||.|.|||++++.||++|+++. ++.|.+|.+++++||+.+|.+|++||
T Consensus 122 di~~D~~~~k~i~~~G~g~~~p~~g~~V~v~y~g~l~dgt~~~~~~--------~~~f~~g~~~v~~gl~~~l~~m~~GE 193 (356)
T 3jxv_A 122 DIAKDGGIFKKILKEGDKWENPKDPDEVFVKYEARLEDGTVVSKSE--------GVEFTVKDGHLCPALAKAVKTMKKGE 193 (356)
T ss_dssp ETTSSSSEEEEEEECCBSSCCCCTTCEEEEEEEEEETTSCEEEEEE--------EEEEEGGGCSSSHHHHHHHTTCCBTC
T ss_pred ccccCceeEEEEEecCcccCCCCCCCEEEEEEEEEECCCCEEeccC--------CEEEEeCCCCcchHHHHHHhhCCCCC
Confidence 4567899999999999998889999999999999999999999774 68999999999999999999999999
Q ss_pred EEEEEeeccccccCCCCCCCCC-CCCCCCceEEEEEEeeeecccccccccccEEEEEeecCCCcCCCCCCCeEEEEEEEE
Q 006908 104 VSMFKMKPQMHYGEDDCPVAAP-STFPKDEELHFEIEMIDFAKAKIIADDFGVVKKVINEGQGWETPRAPYEVKAWISAK 182 (626)
Q Consensus 104 ~~~~~ip~~~~~g~~~~~~~~~-~~i~~~~~lv~~v~l~~~~~~~~v~~D~~v~~~i~~~G~g~~~~~~g~~V~v~y~~~ 182 (626)
++.|+|||+++||..|++...+ ..||++++|+|+|+|++|....++..|.+++++++++|.|+..|+.||.|+|||+++
T Consensus 194 ~~~~~v~p~~~yg~~G~~~~~~~~~ip~~~~l~~~vel~~~~~v~dv~~d~~~~~~i~~~g~g~~~~~~gd~V~v~y~g~ 273 (356)
T 3jxv_A 194 KVLLAVKPQYGFGEMGRPAAGEGGAVPPNASLVIDLELVSWKTVTEIGDDKKILKKVLKEXEGYERPNEGAVVTVKITGK 273 (356)
T ss_dssp EEEEEECGGGTTTTTCBCCCC--CCBCTTCCEEEEEEEEEEECEEEESTTCCEEEEEEECCBSSCCCCTTCEEEEEEEEE
T ss_pred EEEEEEChHhhcCCCCCCcccccccCCCCcEEEEEEEEEEEecccccccccceeEEeeecccccCCCCCCCEEEEEEEEE
Confidence 9999999999999998863221 369999999999999999988888899999999999999999999999999999999
Q ss_pred eCCCcEEEecC--CCccEEEEcCCCCccchHHHhhccCCCCcEEEEEEeCCccCCCCCC---CCCCCcceEEEEEEEeeE
Q 006908 183 TGDGKLILSHR--EGEPYFFTFGKSEVPKGLEMGIGTMTREEKAVIYVTSQYLTPSPLM---PVVEGCEEVHFEVELVHL 257 (626)
Q Consensus 183 ~~~g~~~~s~~--~~~p~~~~~g~g~~~~gle~~l~~mk~Ge~~~~~v~~~~~~g~~~~---~~ip~~~~l~~~v~l~~~ 257 (626)
+.||++|+++. ++.|+.|.+|.|++|+||+++|.+|++||+++|+|||+++||..+. ..||++++|+|+|+|++|
T Consensus 274 l~dG~~fd~~~~~~~~p~~f~~G~g~~i~G~e~~l~gm~~Ge~~~v~ip~~~aYG~~~~~~~~~Ip~~~~l~f~vel~~~ 353 (356)
T 3jxv_A 274 LQDGTVFLKKGHDEQEPFEFKTDEEAVIEGLDRAVLNMKKGEVALVTIPPEYAYGSTESKQDAIVPPNSTVIYEVELVSF 353 (356)
T ss_dssp ESSSCEEEEESCTTSCCCEEETTTTSSCHHHHHHHTTCCBTCEEEEEECGGGTTTTSCEESSSEECTTCCEEEEEEEEEE
T ss_pred ECCCCEEeeccccCCcCEEEEECCCccchHHHHHHhCCCCCCEEEEEEChHHccCCCCcCCCCcCCcCCeEEEEEEEEEE
Confidence 99999999873 5799999999999999999999999999999999999999997643 568999999999999998
Q ss_pred E
Q 006908 258 I 258 (626)
Q Consensus 258 ~ 258 (626)
.
T Consensus 354 ~ 354 (356)
T 3jxv_A 354 V 354 (356)
T ss_dssp E
T ss_pred E
Confidence 5
No 6
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=100.00 E-value=2.3e-37 Score=312.81 Aligned_cols=223 Identities=30% Similarity=0.436 Sum_probs=201.4
Q ss_pred ccccEEEEEeecCCCcCCCCCCCeEEEEEEEEeCCCcEEEecC-CCccEEEEcCCCCccchHHHhhccCCCCcEEEEEEe
Q 006908 151 DDFGVVKKVINEGQGWETPRAPYEVKAWISAKTGDGKLILSHR-EGEPYFFTFGKSEVPKGLEMGIGTMTREEKAVIYVT 229 (626)
Q Consensus 151 ~D~~v~~~i~~~G~g~~~~~~g~~V~v~y~~~~~~g~~~~s~~-~~~p~~~~~g~g~~~~gle~~l~~mk~Ge~~~~~v~ 229 (626)
.++++.++++++|.|...|+.||.|+|||++++.||++|+++. ++.|+.|.+|.+++++||++||.+|++|++++|+||
T Consensus 49 ~~~gl~~~vl~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G~e~aL~gm~~Ge~~~v~ip 128 (280)
T 1q1c_A 49 QDEGVLKVIKREGTGTEMPMIGDRVFVHYTGWLLDGTKFDSSLDRKDKFSFDLGKGEVIKAWDIAIATMKVGEVCHITCK 128 (280)
T ss_dssp CSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETTSCEEEESTTSSSCEEEETTTTSSCHHHHHHHTTCCTTCEEEEEEC
T ss_pred CCCceEEEEEeCCCCCcCCCCCCEEEEEEEEEECCCCEEEecccCCCCEEEEECCcChhHHHHHHHhcCCCCCEEEEEEC
Confidence 6889999999999997669999999999999999999999886 468999999999999999999999999999999999
Q ss_pred CCccCCCCC-CCCCCCcceEEEEEEEeeEEeeeeec--CCCcEEEEEeeCCCCCCCCCCCCCCCeEEEEEEEEEecCCCc
Q 006908 230 SQYLTPSPL-MPVVEGCEEVHFEVELVHLIQVRDML--GDGRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKK 306 (626)
Q Consensus 230 ~~~~~g~~~-~~~ip~~~~l~~~v~l~~~~~~~d~~--~dg~v~k~il~~G~G~~~~~~p~~~~~V~v~y~~~~~~~~g~ 306 (626)
|+++||..+ ++.||++++|+|+|+|+++.. .++. .|++++++++++|.|..+ |..|+.|+|||++++ + |+
T Consensus 129 p~~aYG~~g~~~~Ip~~~~lvf~Vel~~i~~-~~~~~~~d~gl~~~il~~G~G~~~---~~~gd~V~i~y~g~~-d--G~ 201 (280)
T 1q1c_A 129 PEYAYGSAGSPPKIPPNATLVFEVELFEFKG-EDLTEEEDGGIIRRIQTRGEGYAK---PNEGAIVEVALEGYY-K--DK 201 (280)
T ss_dssp GGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC-EECCTTCSSSEEEEEEECCSCSCC---CCTTCEEEEEEEEEE-T--TE
T ss_pred cHHhCCCcCccCCCCCCCcEEEEEEeeeecc-cccccccccceeEEeeeccccccc---ccCCceEEEEEEEEe-C--CE
Confidence 999999754 467999999999999999976 4777 889999999999999742 678999999999997 4 88
Q ss_pred EEEeeccCCCCCCEEEEcCCCc---chhhHHHHhhcCCCCCEEEEEecCCCccccCCCCC-CCCCCcceeeeeeeccccc
Q 006908 307 VFYDTRVDNDGQPLEFSSGEGL---VPEGFEMCVRLMLPGEIALVTCPPDYAYDKFLRPA-NVPEGAHIQWEIELLGFEK 382 (626)
Q Consensus 307 ~~~dt~~~~~~~p~~f~lG~~~---v~~gle~~l~~M~~GE~~~~~i~~~~ayg~~~~~~-~ip~~~~l~~~vel~~~~~ 382 (626)
+|+ + +|+.|.+|.+. +++||+.+|.+|++||++.|+|||+|+||..+.+. .||++++++|+|+|++|..
T Consensus 202 ~fd-~------~~~~f~lG~g~~~~~i~G~e~~l~gmk~Ge~~~v~ip~~~~yG~~~~~~~~IP~~~~l~f~V~L~~i~~ 274 (280)
T 1q1c_A 202 LFD-Q------RELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLKPSYAFGSVGKEKFQIPPNAELKYELHLKSFEK 274 (280)
T ss_dssp EEE-E------EEEEEETTCGGGGTCCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCBGGGTBCTTCCEEEEEEEEEEEC
T ss_pred EEe-c------CCeEEEecCCcccccchhHHHHHhCCCCCcEEEEEEChhHcCCcCCCccCccCCCCeEEEEEEEEEEeC
Confidence 884 3 37999999998 59999999999999999999999999999988665 5999999999999999998
Q ss_pred CCCCC
Q 006908 383 PKDWT 387 (626)
Q Consensus 383 ~~~~~ 387 (626)
+++.|
T Consensus 275 ~~~~W 279 (280)
T 1q1c_A 275 AKESW 279 (280)
T ss_dssp CCC--
T ss_pred CCCCC
Confidence 87654
No 7
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=100.00 E-value=9.3e-38 Score=327.56 Aligned_cols=277 Identities=30% Similarity=0.466 Sum_probs=205.5
Q ss_pred CCcEEEEEeeCCCCCCCCCCCCCCCeEEEEEEEEEecCCCcEEEeeccCCCCCCEEEEcCCC-cchhhHHHHhhcCCCCC
Q 006908 266 DGRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEG-LVPEGFEMCVRLMLPGE 344 (626)
Q Consensus 266 dg~v~k~il~~G~G~~~~~~p~~~~~V~v~y~~~~~~~~g~~~~dt~~~~~~~p~~f~lG~~-~v~~gle~~l~~M~~GE 344 (626)
+++|.++++++|.|.. |..|+.|+|||+|++.+ +|++|++|. . +++|+.|.+|.+ .+++||+.+|.+|++||
T Consensus 48 ~~~~~~~~~~~g~g~~----~~~gd~v~v~y~g~~~~-~g~~fd~~~-~-~~~~~~~~lg~~~~~i~g~e~~l~~m~~Ge 120 (338)
T 2if4_A 48 DEKVSKQIIKEGHGSK----PSKYSTCFLHYRAWTKN-SQHKFEDTW-H-EQQPIELVLGKEKKELAGLAIGVASMKSGE 120 (338)
T ss_dssp ETTEEEEEEECCBSCC----CCTTCEEEEEEEEEETT-TCCCCEEHH-H-HTCCEEEETTSCCGGGHHHHHHHHHCCBTC
T ss_pred CCCeEEEEEeCCCCCC----CCCCCEEEEEEEEEEcC-CCcEeeccc-C-CCCCeEEEcCCCCcccHHHHHHHhcCCCCC
Confidence 4679999999999975 57899999999999875 488885543 3 468999999999 89999999999999999
Q ss_pred EEEEEecCCCccccCCC--CCCCCCCcceeeeeeecccccCCC---CCCCChhhHHHHHHHHHhhhchhhccccHHHHHH
Q 006908 345 IALVTCPPDYAYDKFLR--PANVPEGAHIQWEIELLGFEKPKD---WTGLSFDGIMDEAEKIRVTGNRLFKEGKFELAKA 419 (626)
Q Consensus 345 ~~~~~i~~~~ayg~~~~--~~~ip~~~~l~~~vel~~~~~~~~---~~~~~~~e~~~~a~~~k~~Gn~~f~~g~~~~A~~ 419 (626)
++.|+||+.++||..+. .+.||+++++.|.|+|+++..... .+.++.++++..+..++..|+.+|+.|+|.+|+.
T Consensus 121 ~~~~~i~~~~~yg~~~~~~~~~ip~~~~l~f~v~L~~~~~~~e~~~~~~~~~~~~~~~a~~~~~~g~~~~~~g~~~~A~~ 200 (338)
T 2if4_A 121 RALVHVGWELAYGKEGNFSFPNVPPMADLLYEVEVIGFDETKEGKARSDMTVEERIGAADRRKMDGNSLFKEEKLEEAMQ 200 (338)
T ss_dssp EEEEEECGGGSSCSSCCCSSSCCCTTCCEEEEEEEEEEECCCCCBTTTBCCHHHHHHHHHHHHHHHHHTCSSSCCHHHHH
T ss_pred eEEEEECHHHhcCCCCCCCCCCCCCCCcEEEEEEEEEecCCccccccccCCHHHHHHHHHHHHHHHHHHHhcCCHHHHHH
Confidence 99999999999999987 367999999999999999877543 5678899999999999999999999999999999
Q ss_pred HHHHHHHhcccCC--CCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCH
Q 006908 420 KYEKVLRDFNHVN--PQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEF 497 (626)
Q Consensus 420 ~y~~al~~l~~~~--p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~~~ka~~~~g~a~~~lg~~ 497 (626)
+|++|+...+... .......+....+...+|+|+|.||+++++|.+|+.+|.++|+++|+++++||++|.+|..+|+|
T Consensus 201 ~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~a~~~~g~~ 280 (338)
T 2if4_A 201 QYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVLTEEEKNPKALFRRGKAKAELGQM 280 (338)
T ss_dssp HHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCH
T ss_pred HHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCH
Confidence 9999998432210 00011122233445569999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCCC
Q 006908 498 EEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQEVESKARKQFKGLFDKKPGE 550 (626)
Q Consensus 498 ~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 550 (626)
++|+.+|++|++++|++ ..++..|..+....+...++.+..|++||...+..
T Consensus 281 ~~A~~~l~~al~l~p~~-~~a~~~L~~l~~~~~~~~~~a~~~~~~~l~~~p~~ 332 (338)
T 2if4_A 281 DSARDDFRKAQKYAPDD-KAIRRELRALAEQEKALYQKQKEMYKGIFKGKDEG 332 (338)
T ss_dssp HHHHHHHHHTTC-----------------------------------------
T ss_pred HHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCC
Confidence 99999999999999997 78999999998888888888889999999876544
No 8
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=100.00 E-value=2.4e-34 Score=301.39 Aligned_cols=276 Identities=29% Similarity=0.485 Sum_probs=244.7
Q ss_pred eeeecCCCcEEEEEeeCCCCCCCCCCCCCCCeEEEEEEEEEecCCCcEEEeeccCCCCCCEEEEcCCCc---chhhHHHH
Q 006908 260 VRDMLGDGRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGL---VPEGFEMC 336 (626)
Q Consensus 260 ~~d~~~dg~v~k~il~~G~G~~~~~~p~~~~~V~v~y~~~~~~~~g~~~~dt~~~~~~~p~~f~lG~~~---v~~gle~~ 336 (626)
+.+++.|++|+|+|+++|.|.. +|..|++|+|||+|++ + |++|+ ++ |+.|.+|.|. ++++|+.|
T Consensus 18 ~~~~~~~~~~~~~~~~~g~g~~---~p~~~~~v~v~y~g~~-~--g~~fd-~~------~~~f~lG~g~~~~~~~~~e~a 84 (336)
T 1p5q_A 18 GSHMEEDGGIIRRIQTRGEGYA---KPNEGAIVEVALEGYY-K--DKLFD-QR------ELRFEIGEGENLDLPYGLERA 84 (336)
T ss_dssp ----CCTTSEEEEEEECCCCSC---CCCTTCEEEEEEEEEE-T--TEEEE-EE------EEEEETTCGGGGTCCHHHHHH
T ss_pred ceeecCCCcEEEEEEeCCCCCC---CCCCCCeEEEEEEEEE-C--CEEEe-cC------CeEEEeCCCCccccchHHHHH
Confidence 3577899999999999999973 3688999999999998 4 88884 32 7999999987 58999999
Q ss_pred hhcCCCCCEEEEEecCCCccccCCCCC-CCCCCcceeeeeeecccccCCCCCCCChhhHHHHHHHHHhhhchhhccccHH
Q 006908 337 VRLMLPGEIALVTCPPDYAYDKFLRPA-NVPEGAHIQWEIELLGFEKPKDWTGLSFDGIMDEAEKIRVTGNRLFKEGKFE 415 (626)
Q Consensus 337 l~~M~~GE~~~~~i~~~~ayg~~~~~~-~ip~~~~l~~~vel~~~~~~~~~~~~~~~e~~~~a~~~k~~Gn~~f~~g~~~ 415 (626)
|..|++||++.|.|+|+++||..|.+. .||+++.+.|++.|.++......+.+..+.....+..+...|+.+++.|+|+
T Consensus 85 l~~~~~Ge~~~l~i~p~~ayg~~g~~~~~i~~~~~l~f~~~L~~~~~A~~~~~~a~~~~p~~a~~~~~~g~~~~~~g~~~ 164 (336)
T 1p5q_A 85 IQRMEKGEHSIVYLKPSYAFGSVGKEKFQIPPNAELKYELHLKSFEKAKESWEMNSEEKLEQSTIVKERGTVYFKEGKYK 164 (336)
T ss_dssp HTTCCTTCEEEEEECTTTTTTTTCBGGGTBCSSCCEEEEEEEEEEECCCCGGGCCHHHHHHHHHHHHHHHHHHHHHTCHH
T ss_pred HhcCCCCCeEEEEECCccccCcCCCCccCCCCCCeEEEEEEEeecccccchhcCCHHHHHHHHHHHHHHHHHHHHCCCHH
Confidence 999999999999999999999999766 5999999999999999999888888888888899999999999999999999
Q ss_pred HHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Q 006908 416 LAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALG 495 (626)
Q Consensus 416 ~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~~~ka~~~~g~a~~~lg 495 (626)
+|+..|++|+...+.......+.......+...+|+|+|.||+++++|.+|+.+|.+||+++|+++++|+++|.+|..+|
T Consensus 165 ~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g 244 (336)
T 1p5q_A 165 QALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVN 244 (336)
T ss_dssp HHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCC
Confidence 99999999999654332223344555667778999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCC
Q 006908 496 EFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQEVESKARKQFKGLFDKKPG 549 (626)
Q Consensus 496 ~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 549 (626)
++++|+.+|++|++++|++ ..+...|..+...+.+..++++..|++||.+...
T Consensus 245 ~~~~A~~~~~~al~l~P~~-~~a~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~ 297 (336)
T 1p5q_A 245 DFELARADFQKVLQLYPNN-KAAKTQLAVCQQRIRRQLAREKKLYANMFERLAE 297 (336)
T ss_dssp CHHHHHHHHHHHHHHCSSC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999998 6899999999999999999999999999977543
No 9
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.92 E-value=5.3e-25 Score=230.50 Aligned_cols=272 Identities=15% Similarity=0.162 Sum_probs=161.8
Q ss_pred ccccEEEEEeecCCCcCCCCCCCeEEEEEEEEeCC-CcEEEecC-CCccEEEEcCCC-CccchHHHhhccCCCCcEEEEE
Q 006908 151 DDFGVVKKVINEGQGWETPRAPYEVKAWISAKTGD-GKLILSHR-EGEPYFFTFGKS-EVPKGLEMGIGTMTREEKAVIY 227 (626)
Q Consensus 151 ~D~~v~~~i~~~G~g~~~~~~g~~V~v~y~~~~~~-g~~~~s~~-~~~p~~~~~g~g-~~~~gle~~l~~mk~Ge~~~~~ 227 (626)
.+.++.+.++++|.| ..|..||.|+|||++++.+ |++|+++. .+.|+.|.+|.| ++|+||+++|.+|++||+++|.
T Consensus 47 ~~~~~~~~~~~~g~g-~~~~~gd~v~v~y~g~~~~~g~~fd~~~~~~~~~~~~lg~~~~~i~g~e~~l~~m~~Ge~~~~~ 125 (338)
T 2if4_A 47 LDEKVSKQIIKEGHG-SKPSKYSTCFLHYRAWTKNSQHKFEDTWHEQQPIELVLGKEKKELAGLAIGVASMKSGERALVH 125 (338)
T ss_dssp EETTEEEEEEECCBS-CCCCTTCEEEEEEEEEETTTCCCCEEHHHHTCCEEEETTSCCGGGHHHHHHHHHCCBTCEEEEE
T ss_pred CCCCeEEEEEeCCCC-CCCCCCCEEEEEEEEEEcCCCcEeecccCCCCCeEEEcCCCCcccHHHHHHHhcCCCCCeEEEE
Confidence 456899999999999 6899999999999999875 99999874 578999999999 9999999999999999999999
Q ss_pred EeCCccCCCCCC---CCCCCcceEEEEEEEeeEEeeeeecCCCcEEEEEeeCCCCCCCCCCCCCCCeEEEEEEEEEec--
Q 006908 228 VTSQYLTPSPLM---PVVEGCEEVHFEVELVHLIQVRDMLGDGRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLN-- 302 (626)
Q Consensus 228 v~~~~~~g~~~~---~~ip~~~~l~~~v~l~~~~~~~d~~~dg~v~k~il~~G~G~~~~~~p~~~~~V~v~y~~~~~~-- 302 (626)
|||.++||..+. +.||++.+++|+|+|.++....+ +..... . . ..-....
T Consensus 126 i~~~~~yg~~~~~~~~~ip~~~~l~f~v~L~~~~~~~e----------------~~~~~~---~--~----~~~~~~~a~ 180 (338)
T 2if4_A 126 VGWELAYGKEGNFSFPNVPPMADLLYEVEVIGFDETKE----------------GKARSD---M--T----VEERIGAAD 180 (338)
T ss_dssp ECGGGSSCSSCCCSSSCCCTTCCEEEEEEEEEEECCCC----------------CBTTTB---C--C----HHHHHHHHH
T ss_pred ECHHHhcCCCCCCCCCCCCCCCcEEEEEEEEEecCCcc----------------cccccc---C--C----HHHHHHHHH
Confidence 999999998664 77999999999999998854221 000000 0 0 0000000
Q ss_pred ---CCCcEEEeeccCCCCCCEEEEcCCC-cchhhHHHHhhcCCCCCEEEEEecCCCccccCCCCCCCCCCcceeeeeeec
Q 006908 303 ---EEKKVFYDTRVDNDGQPLEFSSGEG-LVPEGFEMCVRLMLPGEIALVTCPPDYAYDKFLRPANVPEGAHIQWEIELL 378 (626)
Q Consensus 303 ---~~g~~~~dt~~~~~~~p~~f~lG~~-~v~~gle~~l~~M~~GE~~~~~i~~~~ayg~~~~~~~ip~~~~l~~~vel~ 378 (626)
..|..+ +..|+- .-+..++.++.... .+. .|.
T Consensus 181 ~~~~~g~~~-------------~~~g~~~~A~~~y~~Al~~~p-------------------------~~~--~~~---- 216 (338)
T 2if4_A 181 RRKMDGNSL-------------FKEEKLEEAMQQYEMAIAYMG-------------------------DDF--MFQ---- 216 (338)
T ss_dssp HHHHHHHHT-------------CSSSCCHHHHHHHHHHHHHSC-------------------------HHH--HHT----
T ss_pred HHHHHHHHH-------------HhcCCHHHHHHHHHHHHHHhc-------------------------cch--hhh----
Confidence 000000 000100 01122222222110 000 000
Q ss_pred ccccCCCCCCCChhhHHH--HHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHH
Q 006908 379 GFEKPKDWTGLSFDGIMD--EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAAC 456 (626)
Q Consensus 379 ~~~~~~~~~~~~~~e~~~--~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~ 456 (626)
. . -...+... ....+.+.|..+++.|+|++|+..|++||. +.|.+ ..+|+|+|.|
T Consensus 217 ---~----~-~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al~----~~p~~-----------~~a~~~lg~a 273 (338)
T 2if4_A 217 ---L----Y-GKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVLT----EEEKN-----------PKALFRRGKA 273 (338)
T ss_dssp ---C----C-HHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHH
T ss_pred ---h----c-ccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCCC-----------HHHHHHHHHH
Confidence 0 0 00011111 123677899999999999999999999999 56655 5689999999
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH-HHHcCCHHHHHHHHHHHHhcCCCCH
Q 006908 457 LLKLGECRKSIEACNKVLDANPAHVKGLYRRGMA-YMALGEFEEAQRDFEMMMKVDKSSE 515 (626)
Q Consensus 457 ~~kl~~~~~A~~~~~~aL~~dp~~~ka~~~~g~a-~~~lg~~~eA~~~~~kAl~l~P~~~ 515 (626)
|+.+++|++|+.++.++++++|++..++..++.+ ....+.++.|.+.|.+++.+.|.+.
T Consensus 274 ~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~~~~~~~a~~~~~~~l~~~p~~~ 333 (338)
T 2if4_A 274 KAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQEKALYQKQKEMYKGIFKGKDEGG 333 (338)
T ss_dssp HHTTTCHHHHHHHHHHTTC-----------------------------------------
T ss_pred HHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCC
Confidence 9999999999999999999999999999999998 4456778889999999999999863
No 10
>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1
Probab=99.89 E-value=5.2e-23 Score=185.01 Aligned_cols=128 Identities=26% Similarity=0.490 Sum_probs=107.5
Q ss_pred cCcee--cCCceEEEEEecCCCCCCCCCCCEEEEEEEEEEcCCcEEEeeccCCCCCCcceEEEeCCCccchhHHhhcCCC
Q 006908 22 RRMKI--VPGSLMKAVMRPGGGDSTPSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTM 99 (626)
Q Consensus 22 ~~~~~--~~~gv~~~i~~~G~G~~~p~~gd~V~v~y~~~~~dG~~~~st~~~~~~~~~p~~~~lg~~~~~~gle~~l~~m 99 (626)
+.+++ +++||+|+++++|+|...|+.||.|+|||++++.||++|++|+. .+.|+.|.+|.+++++||+++|.+|
T Consensus 5 ~~dv~~~~~~gl~~~~l~~G~g~~~~~~gd~V~v~Y~g~~~dG~~fdss~~----~~~p~~f~lG~~~vi~G~e~~l~gm 80 (135)
T 1r9h_A 5 KIDITPKKDGGVLKLIKKEGQGVVKPTTGTTVKVHYVGTLENGTKFDSSRD----RGDQFSFNLGRGNVIKGWDLGVATM 80 (135)
T ss_dssp CEECSTTCCSSEEEEEEECCBSSCCCCTTCEEEEEEEEEETTSCEEEEHHH----HTSCEEEETTTTSSCHHHHHHHTTC
T ss_pred ceecccCCCCcEEEEEEEccCCCcCCCCCCEEEEEEEEEECCCCEEEecCc----CCCCEEEEeCCCCccHHHHHHHhcC
Confidence 34566 89999999999999985699999999999999889999999985 5679999999999999999999999
Q ss_pred CCCcEEEEEeeccccccCCCCCCCCCCCCCCCceEEEEEEeeeeccccccc-ccccEEE
Q 006908 100 LKGEVSMFKMKPQMHYGEDDCPVAAPSTFPKDEELHFEIEMIDFAKAKIIA-DDFGVVK 157 (626)
Q Consensus 100 ~~Ge~~~~~ip~~~~~g~~~~~~~~~~~i~~~~~lv~~v~l~~~~~~~~v~-~D~~v~~ 157 (626)
++|++++|+|||+++||..+.+ +.||++++++|+|+|+++....... .|++++|
T Consensus 81 ~~Ge~~~v~ip~~~aYG~~g~~----~~Ip~~~~l~f~v~l~~i~~~~l~~~~d~~v~k 135 (135)
T 1r9h_A 81 TKGEVAEFTIRSDYGYGDAGSP----PKIPGGATLIFEVELFEWSAEDISPDRDGTILR 135 (135)
T ss_dssp CBTCEEEEEECGGGTTTTTCBT----TTBCTTCCEEEEEEEEEEEC-------------
T ss_pred CCCCEEEEEEChHHcCCCCCCC----CCcCcCCcEEEEEEEEEeecCCcCcCCCCcccC
Confidence 9999999999999999998875 7899999999999999997653222 5555543
No 11
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.89 E-value=2.9e-22 Score=209.47 Aligned_cols=267 Identities=15% Similarity=0.196 Sum_probs=193.9
Q ss_pred cccccccEEEEEeecCCCcCCCCCCCeEEEEEEEEeCCCcEEEecCCCccEEEEcCCCC---ccchHHHhhccCCCCcEE
Q 006908 148 IIADDFGVVKKVINEGQGWETPRAPYEVKAWISAKTGDGKLILSHREGEPYFFTFGKSE---VPKGLEMGIGTMTREEKA 224 (626)
Q Consensus 148 ~v~~D~~v~~~i~~~G~g~~~~~~g~~V~v~y~~~~~~g~~~~s~~~~~p~~~~~g~g~---~~~gle~~l~~mk~Ge~~ 224 (626)
.++.|++++++|+++|.|...|..|+.|+|||++++ +|++|+++ |+.|.+|.|. ++++|++||.+|++|+++
T Consensus 20 ~~~~~~~~~~~~~~~g~g~~~p~~~~~v~v~y~g~~-~g~~fd~~----~~~f~lG~g~~~~~~~~~e~al~~~~~Ge~~ 94 (336)
T 1p5q_A 20 HMEEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYY-KDKLFDQR----ELRFEIGEGENLDLPYGLERAIQRMEKGEHS 94 (336)
T ss_dssp --CCTTSEEEEEEECCCCSCCCCTTCEEEEEEEEEE-TTEEEEEE----EEEEETTCGGGGTCCHHHHHHHTTCCTTCEE
T ss_pred eecCCCcEEEEEEeCCCCCCCCCCCCeEEEEEEEEE-CCEEEecC----CeEEEeCCCCccccchHHHHHHhcCCCCCeE
Confidence 345788999999999999778999999999999988 99999986 8999999886 599999999999999999
Q ss_pred EEEEeCCccCCCCCCC--CCCCcceEEEEEEEeeEEeeeeecCCCcEEEEEeeCCCCCCCCCCCCCCCeEEEEEEEEEec
Q 006908 225 VIYVTSQYLTPSPLMP--VVEGCEEVHFEVELVHLIQVRDMLGDGRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLN 302 (626)
Q Consensus 225 ~~~v~~~~~~g~~~~~--~ip~~~~l~~~v~l~~~~~~~d~~~dg~v~k~il~~G~G~~~~~~p~~~~~V~v~y~~~~~~ 302 (626)
.|.|+|+++||..+.+ .||++..+.|++.|.++....+...- .+. ..| .. ...+ .
T Consensus 95 ~l~i~p~~ayg~~g~~~~~i~~~~~l~f~~~L~~~~~A~~~~~~------a~~----~~p----~~---a~~~------~ 151 (336)
T 1p5q_A 95 IVYLKPSYAFGSVGKEKFQIPPNAELKYELHLKSFEKAKESWEM------NSE----EKL----EQ---STIV------K 151 (336)
T ss_dssp EEEECTTTTTTTTCBGGGTBCSSCCEEEEEEEEEEECCCCGGGC------CHH----HHH----HH---HHHH------H
T ss_pred EEEECCccccCcCCCCccCCCCCCeEEEEEEEeecccccchhcC------CHH----HHH----HH---HHHH------H
Confidence 9999999999987654 58999999999999998643322100 000 000 00 0000 0
Q ss_pred CCCcEEEeeccCCCCCCEEEEcCC-CcchhhHHHHhhcCCCCCEEEEEecCCCccccCCCCCCCCCCcceeeeeeecccc
Q 006908 303 EEKKVFYDTRVDNDGQPLEFSSGE-GLVPEGFEMCVRLMLPGEIALVTCPPDYAYDKFLRPANVPEGAHIQWEIELLGFE 381 (626)
Q Consensus 303 ~~g~~~~dt~~~~~~~p~~f~lG~-~~v~~gle~~l~~M~~GE~~~~~i~~~~ayg~~~~~~~ip~~~~l~~~vel~~~~ 381 (626)
.-|... +..|+ ..-+..++.++.... .. .. +.
T Consensus 152 ~~g~~~-------------~~~g~~~~A~~~y~~Al~~~p-----------~~--------------~~--~~------- 184 (336)
T 1p5q_A 152 ERGTVY-------------FKEGKYKQALLQYKKIVSWLE-----------YE--------------SS--FS------- 184 (336)
T ss_dssp HHHHHH-------------HHHTCHHHHHHHHHHHHHHTT-----------TC--------------CC--CC-------
T ss_pred HHHHHH-------------HHCCCHHHHHHHHHHHHHHhh-----------cc--------------cc--CC-------
Confidence 000000 01111 012233344443211 00 00 00
Q ss_pred cCCCCCCCChhhHHHHHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcC
Q 006908 382 KPKDWTGLSFDGIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLG 461 (626)
Q Consensus 382 ~~~~~~~~~~~e~~~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~ 461 (626)
.....+.....+..+.+.|..+++.|+|++|+..|++|+. +.|.+ ..+|+++|.||+.++
T Consensus 185 -----~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~----~~p~~-----------~~a~~~lg~~~~~~g 244 (336)
T 1p5q_A 185 -----NEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALE----LDSNN-----------EKGLSRRGEAHLAVN 244 (336)
T ss_dssp -----SHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTT
T ss_pred -----hHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCCc-----------HHHHHHHHHHHHHCC
Confidence 0000111122467888999999999999999999999999 56665 568999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHH-HHHHHHHHh
Q 006908 462 ECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEA-QRDFEMMMK 509 (626)
Q Consensus 462 ~~~~A~~~~~~aL~~dp~~~ka~~~~g~a~~~lg~~~eA-~~~~~kAl~ 509 (626)
+|++|+.++.++|+++|++..+++++|.++..++++++| ...|++++.
T Consensus 245 ~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~~~ 293 (336)
T 1p5q_A 245 DFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFE 293 (336)
T ss_dssp CHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998 445555543
No 12
>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A
Probab=99.88 E-value=1.1e-22 Score=184.99 Aligned_cols=115 Identities=30% Similarity=0.501 Sum_probs=107.1
Q ss_pred cCcee--cCCceEEEEEecCCCCCCCCCCCEEEEEEEEEEcCCcEEEeeccCCCCCCcceEEEeCCCccchhHHhhcCCC
Q 006908 22 RRMKI--VPGSLMKAVMRPGGGDSTPSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTM 99 (626)
Q Consensus 22 ~~~~~--~~~gv~~~i~~~G~G~~~p~~gd~V~v~y~~~~~dG~~~~st~~~~~~~~~p~~~~lg~~~~~~gle~~l~~m 99 (626)
..++. .++||+|+++++|+|..+|..||.|.|||++++.||++|++|+. .+.|+.|.+|.+++++||+++|.+|
T Consensus 26 ~~di~~~~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG~~fdss~~----~~~p~~f~lG~g~~i~G~e~~l~gm 101 (144)
T 3o5e_A 26 GEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHD----RNEPFVFSLGKGQVIKAWDIGVATM 101 (144)
T ss_dssp CEECCSSCSSSEEEEEEECCBSSCCCCTTCEEEEEEEEECTTSCEEEESGG----GTSCEEEETTSSSSCHHHHHHHTTC
T ss_pred cccccccCCCeEEEEEEECCCCCccCCCCCEEEEEEEEEECCCCEEEeecc----cCCCeEEEeCCCcccHHHHHHHhCC
Confidence 34455 79999999999999986699999999999999889999999987 6789999999999999999999999
Q ss_pred CCCcEEEEEeeccccccCCCCCCCCCCCCCCCceEEEEEEeeeec
Q 006908 100 LKGEVSMFKMKPQMHYGEDDCPVAAPSTFPKDEELHFEIEMIDFA 144 (626)
Q Consensus 100 ~~Ge~~~~~ip~~~~~g~~~~~~~~~~~i~~~~~lv~~v~l~~~~ 144 (626)
++|+++.|+|||+++||..+.+ +.|||+++|+|+|+|++|+
T Consensus 102 ~~Ge~~~v~ipp~~aYG~~g~~----~~Ipp~~~L~f~VeL~~ik 142 (144)
T 3o5e_A 102 KKGEICHLLCKPEYAYGSAGSL----PKIPSNATLFFEIELLDFK 142 (144)
T ss_dssp CBTCEEEEEECGGGTTTTTCBT----TTBCTTCCEEEEEEEEEEE
T ss_pred CCCCEEEEEEChHHCcCCCCCC----CCcCCCCeEEEEEEEEEec
Confidence 9999999999999999999885 7899999999999999985
No 13
>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*
Probab=99.88 E-value=2.5e-22 Score=176.96 Aligned_cols=114 Identities=26% Similarity=0.492 Sum_probs=102.2
Q ss_pred cCCceEEEEEecCCCCCCCCCCCEEEEEEEEEEcCCcEEEeeccCC---CCCCcceEEEeCCCccchhHHhhcCCCCCCc
Q 006908 27 VPGSLMKAVMRPGGGDSTPSDGDQVAYHCTVRTLDGVIVESTRSEY---GGKGIPIRHVLGKSKILLGLLEGIPTMLKGE 103 (626)
Q Consensus 27 ~~~gv~~~i~~~G~G~~~p~~gd~V~v~y~~~~~dG~~~~st~~~~---~~~~~p~~~~lg~~~~~~gle~~l~~m~~Ge 103 (626)
.|+||+|+++++|+|...|+.||.|+|||++++.||++|++|+... ...+.|+.|.+|.+++++||+++|.+|++|+
T Consensus 2 ~p~g~~~~il~~G~g~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~~~~~~~~p~~f~lG~~~~i~G~e~~l~gm~~Ge 81 (119)
T 3kz7_A 2 GPPKYTKSILKKGDKTNFPKKGDVVHCWYTGTLPDGTVFDTNIQTSSKKKKNAKPLSFKVGVGKVIRGWDEALLTMSKGE 81 (119)
T ss_dssp CSCSEEEEEEECCCSSCCCCTTCEEEEEEEEECTTSCEEEECCCCSSSTTTTCCCEEEETTSSSSCHHHHHHHTTCCTTC
T ss_pred CCCccEEEEEEcCCCCCcCCCCCEEEEEEEEEECCCCEEEeccccccccccCCCCEEEEECCCChhHHHHHHHhCCCCCC
Confidence 5899999999999997669999999999999988999999997410 0124799999999999999999999999999
Q ss_pred EEEEEeeccccccCCCCCCCCCCCCCCCceEEEEEEeeee
Q 006908 104 VSMFKMKPQMHYGEDDCPVAAPSTFPKDEELHFEIEMIDF 143 (626)
Q Consensus 104 ~~~~~ip~~~~~g~~~~~~~~~~~i~~~~~lv~~v~l~~~ 143 (626)
+++|+|||+++||..+.+ +..|||+++|+|+|+|+++
T Consensus 82 ~~~v~ip~~~aYG~~g~~---~~~Ip~~~~l~f~veL~~i 118 (119)
T 3kz7_A 82 KARLEIEPEWAYGKKGQP---DAKIPPNTKLIFEVELVDI 118 (119)
T ss_dssp EEEEEECGGGTTCTTCBG---GGTBCTTCCEEEEEEEEEE
T ss_pred EEEEEECcHHhcCCCCCC---CCccCcCCeEEEEEEEEEe
Confidence 999999999999999874 2379999999999999986
No 14
>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A
Probab=99.88 E-value=2.2e-22 Score=179.31 Aligned_cols=111 Identities=32% Similarity=0.532 Sum_probs=104.8
Q ss_pred ecCCceEEEEEecCCCCCCCCCCCEEEEEEEEEEcCCcEEEeeccCCCCCCcceEEEeCCCccchhHHhhcCCCCCCcEE
Q 006908 26 IVPGSLMKAVMRPGGGDSTPSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTMLKGEVS 105 (626)
Q Consensus 26 ~~~~gv~~~i~~~G~G~~~p~~gd~V~v~y~~~~~dG~~~~st~~~~~~~~~p~~~~lg~~~~~~gle~~l~~m~~Ge~~ 105 (626)
.+++||+|+++++|+|..+|+.||.|+|||++++.||++|++|+. .+.|+.|.+|.+++++||+++|.+|++|+++
T Consensus 16 ~~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG~~fdss~~----~~~p~~f~lG~g~~i~G~e~~l~gm~~Ge~~ 91 (128)
T 3o5q_A 16 KKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHD----RNEPFVFSLGKGQVIKAWDIGVATMKKGEIC 91 (128)
T ss_dssp SCSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETTSCEEEEHHH----HTSCEEEETTSSSSCHHHHHHHTTCCTTCEE
T ss_pred cCCCCEEEEEEECCCCCccCCCCCEEEEEEEEEECCCCEEEecCC----CCCCEEEEECCCCccHHHHHHHhcCCCCCEE
Confidence 378999999999999986699999999999999999999999986 5789999999999999999999999999999
Q ss_pred EEEeeccccccCCCCCCCCCCCCCCCceEEEEEEeeeec
Q 006908 106 MFKMKPQMHYGEDDCPVAAPSTFPKDEELHFEIEMIDFA 144 (626)
Q Consensus 106 ~~~ip~~~~~g~~~~~~~~~~~i~~~~~lv~~v~l~~~~ 144 (626)
+|.|||+++||..+.+ +.|||+++|+|+|+|+++.
T Consensus 92 ~v~ip~~~aYG~~g~~----~~Ip~~~~l~f~vel~~i~ 126 (128)
T 3o5q_A 92 HLLCKPEYAYGSAGSL----PKIPSNATLFFEIELLDFK 126 (128)
T ss_dssp EEEECGGGTTTTTCBT----TTBCTTCCEEEEEEEEEEE
T ss_pred EEEEChHHcCCCCCCC----CCcCCCCEEEEEEEEEEec
Confidence 9999999999999875 7899999999999999985
No 15
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1
Probab=99.88 E-value=3.7e-22 Score=174.09 Aligned_cols=111 Identities=25% Similarity=0.514 Sum_probs=103.5
Q ss_pred ecCCceEEEEEecCCCCCCCCCCCEEEEEEEEEEcCCcEEEeeccCCCCCCcceEEEeCCCccchhHHhhcCCCCCCcEE
Q 006908 26 IVPGSLMKAVMRPGGGDSTPSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTMLKGEVS 105 (626)
Q Consensus 26 ~~~~gv~~~i~~~G~G~~~p~~gd~V~v~y~~~~~dG~~~~st~~~~~~~~~p~~~~lg~~~~~~gle~~l~~m~~Ge~~ 105 (626)
++++|+.|+++++|+|...|+.||.|++||++++.||++|++++. .+.|+.|.+|.+++++||+++|.+|++|+++
T Consensus 3 ~~~~g~~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG~~~d~s~~----~~~p~~f~lG~~~~i~g~e~~l~gm~~Ge~~ 78 (113)
T 1yat_A 3 VIEGNVKIDRISPGDGATFPKTGDLVTIHYTGTLENGQKFDSSVD----RGSPFQCNIGVGQVIKGWDVGIPKLSVGEKA 78 (113)
T ss_dssp ECGGGCEEEEEECCCSSCCCCTTCEEEEEEEEEETTSCEEEESTT----TTCCEEEETTSSSSCHHHHHHGGGCCTTCEE
T ss_pred CCCCCeEEEEEECCCCcccCCCCCEEEEEEEEEECCCCEEEecCC----CCCcEEEEeCCCCccHHHHHHHhCCCCCCEE
Confidence 578999999999999987689999999999999889999999986 5679999999999999999999999999999
Q ss_pred EEEeeccccccCCCCCCCCCCCCCCCceEEEEEEeeeec
Q 006908 106 MFKMKPQMHYGEDDCPVAAPSTFPKDEELHFEIEMIDFA 144 (626)
Q Consensus 106 ~~~ip~~~~~g~~~~~~~~~~~i~~~~~lv~~v~l~~~~ 144 (626)
+|.|||+++||..+.+ +.|||+++++|+|+|++++
T Consensus 79 ~v~ip~~~ayG~~~~~----~~Ip~~~~l~f~vel~~ik 113 (113)
T 1yat_A 79 RLTIPGPYAYGPRGFP----GLIPPNSTLVFDVELLKVN 113 (113)
T ss_dssp EEEECGGGTTTTTCBT----TTBCTTCCEEEEEEEEEEC
T ss_pred EEEECHHHCcCCCCCC----CCcCCCCeEEEEEEEEEeC
Confidence 9999999999998874 6799999999999999873
No 16
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*
Probab=99.87 E-value=9.8e-22 Score=175.87 Aligned_cols=113 Identities=27% Similarity=0.453 Sum_probs=105.1
Q ss_pred cCceecCCceEEEEEecCCCCCCCCCCCEEEEEEEEEEcCCcEEEeeccCCCCCCcceEEEeCCCccchhHHhhcCCCCC
Q 006908 22 RRMKIVPGSLMKAVMRPGGGDSTPSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTMLK 101 (626)
Q Consensus 22 ~~~~~~~~gv~~~i~~~G~G~~~p~~gd~V~v~y~~~~~dG~~~~st~~~~~~~~~p~~~~lg~~~~~~gle~~l~~m~~ 101 (626)
...+++++|+.|+++++|+|.. |+.||.|+|||++++.||++|+++++ .+.|+.|.+|.+++++||+++|.+|++
T Consensus 21 ~~~~~~~~gl~~~~l~~G~G~~-~~~gd~V~v~Y~g~~~dG~~fdss~~----~~~p~~f~lG~g~vi~G~eeaL~gmk~ 95 (133)
T 2y78_A 21 MTVVTTESGLKYEDLTEGSGAE-ARAGQTVSVHYTGWLTDGQKFDSSKD----RNDPFAFVLGGGMVIKGWDEGVQGMKV 95 (133)
T ss_dssp TCCEECTTSCEEEEEECCSSCB-CCTTSEEEEEEEEEETTSCEEEETTT----TTCCEEEETTSSSSCHHHHHHSTTCBT
T ss_pred CCcEECCCCEEEEEEEcCCCCC-CCCCCEEEEEEEEEECCCCEEeccCc----CCCCEEEEeCCCChhHHHHHHHcCCCC
Confidence 3467899999999999999976 99999999999999889999999986 568999999999999999999999999
Q ss_pred CcEEEEEeeccccccCCCCCCCCCCCCCCCceEEEEEEeeee
Q 006908 102 GEVSMFKMKPQMHYGEDDCPVAAPSTFPKDEELHFEIEMIDF 143 (626)
Q Consensus 102 Ge~~~~~ip~~~~~g~~~~~~~~~~~i~~~~~lv~~v~l~~~ 143 (626)
|++++|.|||+++||..+.+ +.|||+++|+|+|+|+++
T Consensus 96 Ge~~~v~ip~~~aYG~~~~~----~~Ipp~~~l~f~VeL~~I 133 (133)
T 2y78_A 96 GGVRRLTIPPQLGYGARGAG----GVIPPNATLVFEVELLDV 133 (133)
T ss_dssp TCEEEEEECGGGTTTTTCBT----TTBCTTCCEEEEEEEEEC
T ss_pred CCEEEEEECcHHhCCCCCCC----CCCCCCCeEEEEEEEEEC
Confidence 99999999999999998874 679999999999999875
No 17
>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...
Probab=99.87 E-value=9.6e-22 Score=169.78 Aligned_cols=106 Identities=26% Similarity=0.558 Sum_probs=99.6
Q ss_pred ceEEEEEecCCCCCCCCCCCEEEEEEEEEEcCCcEEEeeccCCCCCCcceEEEeCCCccchhHHhhcCCCCCCcEEEEEe
Q 006908 30 SLMKAVMRPGGGDSTPSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTMLKGEVSMFKM 109 (626)
Q Consensus 30 gv~~~i~~~G~G~~~p~~gd~V~v~y~~~~~dG~~~~st~~~~~~~~~p~~~~lg~~~~~~gle~~l~~m~~Ge~~~~~i 109 (626)
||+|+++++|+|..+|+.||.|++||++++.||++|++|+. .+.|+.|.+|.+++++||+++|.+|++|++++|.|
T Consensus 1 Gl~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG~~~d~s~~----~~~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~~~i 76 (107)
T 2ppn_A 1 GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRD----RNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTI 76 (107)
T ss_dssp CEEEEEEECCCSSCCCCTTCEEEEEEEEEETTSCEEEEHHH----HTSCEEEETTSCCSCHHHHHHHTTCCTTCEEEEEE
T ss_pred CcEEEEEECcCCCcCCCCCCEEEEEEEEEECCCCEEEecCC----CCCCEEEEeCCCChHHHHHHHHhCCCCCCEEEEEE
Confidence 78999999999987699999999999999889999999986 45799999999999999999999999999999999
Q ss_pred eccccccCCCCCCCCCCCCCCCceEEEEEEeeee
Q 006908 110 KPQMHYGEDDCPVAAPSTFPKDEELHFEIEMIDF 143 (626)
Q Consensus 110 p~~~~~g~~~~~~~~~~~i~~~~~lv~~v~l~~~ 143 (626)
||+++||..+.+ +.|||+++++|+|+|+++
T Consensus 77 p~~~ayG~~~~~----~~Ip~~~~l~f~v~l~~v 106 (107)
T 2ppn_A 77 SPDYAYGATGHP----GIIPPHATLVFDVELLKL 106 (107)
T ss_dssp CGGGTTTTTCBT----TTBCTTCCEEEEEEEEEE
T ss_pred CHHHccCCCCCC----CCcCCCCeEEEEEEEEEe
Confidence 999999998875 679999999999999987
No 18
>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens}
Probab=99.86 E-value=2.3e-22 Score=180.57 Aligned_cols=116 Identities=27% Similarity=0.403 Sum_probs=100.7
Q ss_pred cccCceecCCceEEEEEecCCCCCCCCCCCEEEEEEEEEEc-CCcEEEeeccCCCCCCcceEEEeCCCccchhHHhhcCC
Q 006908 20 DKRRMKIVPGSLMKAVMRPGGGDSTPSDGDQVAYHCTVRTL-DGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPT 98 (626)
Q Consensus 20 ~~~~~~~~~~gv~~~i~~~G~G~~~p~~gd~V~v~y~~~~~-dG~~~~st~~~~~~~~~p~~~~lg~~~~~~gle~~l~~ 98 (626)
..+.++++++||+|+++++|+|.. +..||.|+|||++++. +|++|++|+. .+.|+.|.+|.+++++||+++|.+
T Consensus 17 ~~~~~v~~~~gl~~~vl~~G~g~~-~~~gd~V~v~Y~g~l~~~G~~fdss~~----~~~p~~f~lG~g~~i~G~e~aL~g 91 (134)
T 3b7x_A 17 QRMLDISGDRGVLKDVIREGAGDL-VAPDASVLVKYSGYLEHMDRPFDSNYF----RKTPRLMKLGEDITLWGMELGLLS 91 (134)
T ss_dssp TTCEESSSSSSEEEEEEECCEEEE-CCTTCEEEEEEEEECTTCSSCSEEC-----------CEEC-CCCCCHHHHHHHHT
T ss_pred cccceeeCCCCEEEEEEEcCCCCC-CCCCCEEEEEEEEEECCCCeEEEecCC----CCCCEEEEcCCcchhHHHHHHHhC
Confidence 445678899999999999999987 8899999999999987 6999999986 567999999999999999999999
Q ss_pred CCCCcEEEEEeeccccccCCCCCCCCCCCCCCCceEEEEEEeeeec
Q 006908 99 MLKGEVSMFKMKPQMHYGEDDCPVAAPSTFPKDEELHFEIEMIDFA 144 (626)
Q Consensus 99 m~~Ge~~~~~ip~~~~~g~~~~~~~~~~~i~~~~~lv~~v~l~~~~ 144 (626)
|++|++++|+|||+++||..+.+ +.|||+++|+|+|+|+++.
T Consensus 92 m~~Ge~~~v~ip~~~aYG~~~~~----~~Ip~~~~l~f~VeL~~i~ 133 (134)
T 3b7x_A 92 MRRGELARFLFKPNYAYGTLGCP----PLIPPNTTVLFEIELLDFL 133 (134)
T ss_dssp CEETCEEEEEECGGGTTTTTCBT----TTBCTTCCEEEEEEEEEEC
T ss_pred CCCCCEEEEEECHHHCcCCCCCC----CCcCcCCeEEEEEEEEEEe
Confidence 99999999999999999998875 6799999999999999984
No 19
>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana}
Probab=99.86 E-value=1.7e-21 Score=183.49 Aligned_cols=123 Identities=26% Similarity=0.399 Sum_probs=110.6
Q ss_pred cccccCceecCCceEEEEEecCCCCCCCCCCCEEEEEEEEEEc-CCcEEEeeccCCCCCCcceEEEeCCC-ccchhHHhh
Q 006908 18 EDDKRRMKIVPGSLMKAVMRPGGGDSTPSDGDQVAYHCTVRTL-DGVIVESTRSEYGGKGIPIRHVLGKS-KILLGLLEG 95 (626)
Q Consensus 18 ~~~~~~~~~~~~gv~~~i~~~G~G~~~p~~gd~V~v~y~~~~~-dG~~~~st~~~~~~~~~p~~~~lg~~-~~~~gle~~ 95 (626)
.+.....+++++||+|+++++|.|.. |..||.|+|||++++. +|++|++|+. .+.|+.|.+|.+ ++++||+++
T Consensus 38 ~~~~~~~~~~~~gl~~~vl~~G~G~~-~~~Gd~V~v~Y~g~l~~dG~~fdss~~----~~~p~~f~lG~g~~vi~G~eea 112 (180)
T 2f4e_A 38 PKVDSEAEVLDEKVSKQIIKEGHGSK-PSKYSTCFLHYRAWTKNSQHKFEDTWH----EQQPIELVLGKEKKELAGLAIG 112 (180)
T ss_dssp CCCCSCCEEEETTEEEEEEECCBSCC-BCTTCEEEEEEEEEETTTCCEEEETTT----TTCCEEEETTSCCGGGHHHHHH
T ss_pred cccCCCcEECCCceEEEEEeCCCCCC-CCCCCEEEEEEEEEECCCCcEEeccCc----cCCCEEEEeCCCCchhHHHHHH
Confidence 34566788999999999999999985 9999999999999987 6999999986 678999999999 999999999
Q ss_pred cCCCCCCcEEEEEeeccccccCCCCCCCCCCCCCCCceEEEEEEeeeecccc
Q 006908 96 IPTMLKGEVSMFKMKPQMHYGEDDCPVAAPSTFPKDEELHFEIEMIDFAKAK 147 (626)
Q Consensus 96 l~~m~~Ge~~~~~ip~~~~~g~~~~~~~~~~~i~~~~~lv~~v~l~~~~~~~ 147 (626)
|.+|++|++++|+|||+++||..+.+. ++.||++++|+|+|+|+++....
T Consensus 113 L~gMk~Ge~~~v~iPp~~aYG~~g~~~--~~~Ip~~s~l~F~VeL~~v~~~~ 162 (180)
T 2f4e_A 113 VASMKSGERALVHVGWELAYGKEGNFS--FPNVPPMADLLYEVEVIGFDETK 162 (180)
T ss_dssp HTTCCBTCEEEEEECGGGTTTTTCBSS--SSCBCTTCCEEEEEEEEEESCBC
T ss_pred HhCCCCCCEEEEEECchHhCCcCCccc--CCCcCCCCeEEEEEEEEEEecCc
Confidence 999999999999999999999987621 25799999999999999997544
No 20
>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1
Probab=99.86 E-value=1.2e-21 Score=181.45 Aligned_cols=115 Identities=23% Similarity=0.398 Sum_probs=106.4
Q ss_pred cCceecCCceEEEEEecCCCCCCCCCCCEEEEEEEEEEcCCcEEEeeccCCCCCCcceEEEeCCCccchhHHhhcCCCCC
Q 006908 22 RRMKIVPGSLMKAVMRPGGGDSTPSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTMLK 101 (626)
Q Consensus 22 ~~~~~~~~gv~~~i~~~G~G~~~p~~gd~V~v~y~~~~~dG~~~~st~~~~~~~~~p~~~~lg~~~~~~gle~~l~~m~~ 101 (626)
...+++++||+|+++++|+|...|..||.|+|||++++.||++|++|+. .+.|+.|.+ +++++||+++|.+|++
T Consensus 30 ~~~~~~~sGl~~~vl~~G~G~~~~~~gd~V~v~Y~g~l~dG~~fdss~~----~g~p~~f~l--g~vI~G~eeaL~gMk~ 103 (167)
T 1jvw_A 30 PDAVKLPSGLVFQRIARGSGKRAPAIDDKCEVHYTGRLRDGTVFDSSRE----RGKPTTFRP--NEVIKGWTEALQLMRE 103 (167)
T ss_dssp TTEEECTTSCEEEEEECCCCSBCCCTTCCEEEEEEEECTTSCEEEEHHH----HTSCEEECG--GGSCHHHHHHHTTCCT
T ss_pred CCcEECCCCEEEEEEEcCCCCcCCCCCCEEEEEEEEEECCCCEEeeccc----cCCCEEEEe--CchhHHHHHHHcCCCC
Confidence 4678899999999999999986699999999999999889999999986 568999999 5899999999999999
Q ss_pred CcEEEEEeeccccccCCCCCCCCCCCCCCCceEEEEEEeeeeccc
Q 006908 102 GEVSMFKMKPQMHYGEDDCPVAAPSTFPKDEELHFEIEMIDFAKA 146 (626)
Q Consensus 102 Ge~~~~~ip~~~~~g~~~~~~~~~~~i~~~~~lv~~v~l~~~~~~ 146 (626)
|++++|+|||+++||..+.+ +.||||++|+|+|+|+++.+.
T Consensus 104 Ge~~~~~Ip~~laYG~~g~~----~~Ipp~s~LiF~VeL~~i~~~ 144 (167)
T 1jvw_A 104 GDRWRLFIPYDLAYGVTGGG----GMIPPYSPLEFDVELISIKDG 144 (167)
T ss_dssp TCEEEEEECGGGTTTTTCSS----SSSCTTCCEEEEEEEEEEGGG
T ss_pred CCEEEEEECchhhCCCCCCC----CCcCCCCeEEEEEEEEEEEcC
Confidence 99999999999999998874 689999999999999999754
No 21
>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}
Probab=99.86 E-value=2.4e-21 Score=172.04 Aligned_cols=116 Identities=23% Similarity=0.357 Sum_probs=104.9
Q ss_pred cCceecCCceEEEEEecCC--CCCCCCCCCEEEEEEEEEEc-CCcEEEeeccCCCCCCcceEEEeCCCccchhHHhhcCC
Q 006908 22 RRMKIVPGSLMKAVMRPGG--GDSTPSDGDQVAYHCTVRTL-DGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPT 98 (626)
Q Consensus 22 ~~~~~~~~gv~~~i~~~G~--G~~~p~~gd~V~v~y~~~~~-dG~~~~st~~~~~~~~~p~~~~lg~~~~~~gle~~l~~ 98 (626)
...+++++|++|+++++|. |.. |+.||.|.|||++++. ||++|++|+.. +.+.|+.|.+|.+++++||+++|.+
T Consensus 5 ~~~~~~~~gl~~~~l~~g~~~g~~-~~~gd~V~v~Y~g~~~~dG~~fdss~~~--~~~~p~~f~lG~~~~i~G~e~~l~g 81 (125)
T 4dip_A 5 MGALIPEPEVKIEVLQKPFICHRK-TKGGDLMLVHYEGYLEKDGSLFHSTHKH--NNGQPIWFTLGILEALKGWDQGLKG 81 (125)
T ss_dssp CGGGCCCCCCEEEEEECCSCCSCC-CCTTCEEEEEEEEEETTTCCEEEEHHHH--TTTCCEEEETTSCSSCHHHHHHSTT
T ss_pred CceEECCCCeEEEEEEcCCCCCCc-CCCCCEEEEEEEEEECCCCcEEEEcccC--CCCcCEEEEeCCCChhHHHHHHHhC
Confidence 4567899999999999998 555 9999999999999998 99999999841 1357999999999999999999999
Q ss_pred CCCCcEEEEEeeccccccCCCCCCCCCCCCCCCceEEEEEEeeeecc
Q 006908 99 MLKGEVSMFKMKPQMHYGEDDCPVAAPSTFPKDEELHFEIEMIDFAK 145 (626)
Q Consensus 99 m~~Ge~~~~~ip~~~~~g~~~~~~~~~~~i~~~~~lv~~v~l~~~~~ 145 (626)
|++|++++|.|||+++||..+. +.|||+++|+|+|+|+++..
T Consensus 82 m~~Ge~~~~~ip~~~aYG~~g~-----~~Ip~~~~l~f~vel~~i~~ 123 (125)
T 4dip_A 82 MCVGEKRKLIIPPALGYGKEGK-----GKIPPESTLIFNIDLLEIRN 123 (125)
T ss_dssp CCTTCEEEEEECGGGTTTTTCB-----TTBCTTCCEEEEEEEEEEEC
T ss_pred CCCCCEEEEEEChHHhcCCCCC-----CCCCCCCeEEEEEEEEEEEc
Confidence 9999999999999999999885 47999999999999999864
No 22
>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1
Probab=99.86 E-value=2e-21 Score=174.62 Aligned_cols=120 Identities=32% Similarity=0.485 Sum_probs=101.6
Q ss_pred ccccEEEEEeecCCCcCCCCCCCeEEEEEEEEeCCCcEEEecC-CCccEEEEcCCCCccchHHHhhccCCCCcEEEEEEe
Q 006908 151 DDFGVVKKVINEGQGWETPRAPYEVKAWISAKTGDGKLILSHR-EGEPYFFTFGKSEVPKGLEMGIGTMTREEKAVIYVT 229 (626)
Q Consensus 151 ~D~~v~~~i~~~G~g~~~~~~g~~V~v~y~~~~~~g~~~~s~~-~~~p~~~~~g~g~~~~gle~~l~~mk~Ge~~~~~v~ 229 (626)
.++++.++++++|.|...|+.||.|+|||++++.||++|+++. ++.|+.|.+|.+++++||++||.+|++|++++|.||
T Consensus 12 ~~~gl~~~~l~~G~g~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~~~vi~G~e~~l~gm~~Ge~~~v~ip 91 (135)
T 1r9h_A 12 KDGGVLKLIKKEGQGVVKPTTGTTVKVHYVGTLENGTKFDSSRDRGDQFSFNLGRGNVIKGWDLGVATMTKGEVAEFTIR 91 (135)
T ss_dssp CCSSEEEEEEECCBSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTTTSSCHHHHHHHTTCCBTCEEEEEEC
T ss_pred CCCcEEEEEEEccCCCcCCCCCCEEEEEEEEEECCCCEEEecCcCCCCEEEEeCCCCccHHHHHHHhcCCCCCEEEEEEC
Confidence 6789999999999996679999999999999999999999885 468999999999999999999999999999999999
Q ss_pred CCccCCCCCC-CCCCCcceEEEEEEEeeEEeeeeec--CCCcEEE
Q 006908 230 SQYLTPSPLM-PVVEGCEEVHFEVELVHLIQVRDML--GDGRLIK 271 (626)
Q Consensus 230 ~~~~~g~~~~-~~ip~~~~l~~~v~l~~~~~~~d~~--~dg~v~k 271 (626)
|+++||..+. +.||++++|+|+|+|+++.. .++. .||+|+|
T Consensus 92 ~~~aYG~~g~~~~Ip~~~~l~f~v~l~~i~~-~~l~~~~d~~v~k 135 (135)
T 1r9h_A 92 SDYGYGDAGSPPKIPGGATLIFEVELFEWSA-EDISPDRDGTILR 135 (135)
T ss_dssp GGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC--------------
T ss_pred hHHcCCCCCCCCCcCcCCcEEEEEEEEEeec-CCcCcCCCCcccC
Confidence 9999998644 67999999999999999976 4777 7888876
No 23
>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}
Probab=99.86 E-value=1.1e-21 Score=174.90 Aligned_cols=114 Identities=32% Similarity=0.549 Sum_probs=105.1
Q ss_pred cCceecCCceEEE--EEecCCCCCCCCCCCEEEEEEEEEEcCCcEEEeeccCCCCCCcceEEEeCCCccchhHHhhcCCC
Q 006908 22 RRMKIVPGSLMKA--VMRPGGGDSTPSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTM 99 (626)
Q Consensus 22 ~~~~~~~~gv~~~--i~~~G~G~~~p~~gd~V~v~y~~~~~dG~~~~st~~~~~~~~~p~~~~lg~~~~~~gle~~l~~m 99 (626)
...+.+++|++++ ++++|+|...|+.||.|+|||++++.||++|++|+. .+.|+.|.+|.+++++||+++|.+|
T Consensus 15 ~~~~~~~~Gl~~~K~~l~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~----~~~p~~f~lG~g~vi~G~e~aL~gm 90 (130)
T 2lgo_A 15 QTQGPGSMSAQLEKKVLTPGDGVTKPQAGKKVTVHYDGRFPDGKQFDSSRS----RGKPFQFTLGAGEVIKGWDQGVATM 90 (130)
T ss_dssp SSCSSSSSSCCCCEEEEECCCSSCCCCTTSEEEEEEEEECTTSCEEECTTT----TTCCEEEETTSTTSCHHHHHHHHHS
T ss_pred ccceeCCCceEEEEEEEeccCCCccCCCCCEEEEEEEEEECCCCEEEccCc----CCCCEEEEeCCCCccHHHHHHHhCC
Confidence 4456789999999 999999987689999999999999889999999986 5679999999999999999999999
Q ss_pred CCCcEEEEEeeccccccCCCCCCCCCCCCCCCceEEEEEEeeee
Q 006908 100 LKGEVSMFKMKPQMHYGEDDCPVAAPSTFPKDEELHFEIEMIDF 143 (626)
Q Consensus 100 ~~Ge~~~~~ip~~~~~g~~~~~~~~~~~i~~~~~lv~~v~l~~~ 143 (626)
++|++++|.|||+++||..+.+ +.|||+++++|+|+|+++
T Consensus 91 ~~Ge~~~v~ip~~~aYG~~~~~----~~Ip~~~~l~f~VeL~~i 130 (130)
T 2lgo_A 91 TLGEKALFTIPYQLAYGERGYP----PVIPPKATLVFEVELLAV 130 (130)
T ss_dssp CTTEEEEEEECTTTSTTTTCCS----TTSCSSCCEEEEEEEEEC
T ss_pred CCCCEEEEEECcHHHCCCCCCC----CCcCCCCeEEEEEEEEEC
Confidence 9999999999999999998874 679999999999999875
No 24
>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A
Probab=99.86 E-value=4.2e-21 Score=171.48 Aligned_cols=115 Identities=22% Similarity=0.556 Sum_probs=100.2
Q ss_pred CceecCCc-eEEEEEecC-CCC-CCCCCCCEEEEEEEEEE-cCCcEEEeeccCCCCCCcceEEEeCCCccchhHHhhcCC
Q 006908 23 RMKIVPGS-LMKAVMRPG-GGD-STPSDGDQVAYHCTVRT-LDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPT 98 (626)
Q Consensus 23 ~~~~~~~g-v~~~i~~~G-~G~-~~p~~gd~V~v~y~~~~-~dG~~~~st~~~~~~~~~p~~~~lg~~~~~~gle~~l~~ 98 (626)
...++++| ++++++++| .|. ..|+.||.|+|||++++ .||++|++|+. .+.|+.|.+|.+++++||+++|.+
T Consensus 9 ~~~~~~~g~~~~~il~~G~~g~g~~~~~gd~V~v~Y~g~~~~dG~~fd~s~~----~~~p~~f~lG~g~~i~g~e~~l~g 84 (129)
T 2vn1_A 9 KVELTADGGVIKTILKKGDEGEENIPKKGNEVTVHYVGKLESTGKVFDSSFD----RNVPFKFHLEQGEVIKGWDICVSS 84 (129)
T ss_dssp EEECSTTSSEEEEEEECCCCSGGGSCCTTCEEEEEEEEEETTTCCEEEEGGG----TTCCEEEETTSSSSCHHHHHHHTT
T ss_pred CcEECCCCCEEEEEEeCCCCCCCCcCCCCCEEEEEEEEEECCCCeEEEecCC----CCccEEEEeCCCCcCHHHHHHHhC
Confidence 34455555 555799977 442 34899999999999998 79999999986 568999999999999999999999
Q ss_pred CCCCcEEEEEeeccccccCCCCCCCCCCCCCCCceEEEEEEeeeecc
Q 006908 99 MLKGEVSMFKMKPQMHYGEDDCPVAAPSTFPKDEELHFEIEMIDFAK 145 (626)
Q Consensus 99 m~~Ge~~~~~ip~~~~~g~~~~~~~~~~~i~~~~~lv~~v~l~~~~~ 145 (626)
|++|++++|+|||+++||..+.+ +.|||+++++|+|+|+++..
T Consensus 85 m~~Ge~~~v~ip~~~aYG~~~~~----~~Ip~~~~l~f~vel~~v~~ 127 (129)
T 2vn1_A 85 MRKNEKCLVRIESMYGYGDEGCG----ESIPGNSVLLFEIELLSFRE 127 (129)
T ss_dssp CCTTCEEEEEECGGGTTTTTCBT----TTBCTTCCEEEEEEEEEEEC
T ss_pred CCCCCEEEEEEChHHcCCCCCCC----CCcCCCCeEEEEEEEEEEec
Confidence 99999999999999999998874 67999999999999999864
No 25
>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A
Probab=99.86 E-value=1.3e-21 Score=174.66 Aligned_cols=121 Identities=22% Similarity=0.411 Sum_probs=105.6
Q ss_pred cccccCceecCCceEEEEEecCCCCCCCCCCCEEEEEEEEEEcCCcEEEeeccCCCCCCcceEEEeCCCccchhHHhhcC
Q 006908 18 EDDKRRMKIVPGSLMKAVMRPGGGDSTPSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIP 97 (626)
Q Consensus 18 ~~~~~~~~~~~~gv~~~i~~~G~G~~~p~~gd~V~v~y~~~~~dG~~~~st~~~~~~~~~p~~~~lg~~~~~~gle~~l~ 97 (626)
|+.+...+++++||+|+++++|+|.. |+.||.|+|||++++.||++|++|+. .+.|+.|.+|.+++++||+++|.
T Consensus 1 ~~~~~~~~~~~~Gl~~~~l~~G~G~~-~~~gd~V~v~Y~g~~~dG~~fdss~~----~~~p~~f~lG~~~~i~G~~~~L~ 75 (129)
T 1u79_A 1 ETTSCEFSVSPSGLAFCDKVVGYGPE-AVKGQLIKAHYVGKLENGKVFDSSYN----RGKPLTFRIGVGEVIKGWDQGIL 75 (129)
T ss_dssp ----CCCEECTTSCEEEEEECCSSCB-CCTTCEEEEEEEEECTTSCEEEEHHH----HTSCEEEETTSSSSCHHHHHHHH
T ss_pred CCCCCccEECCCCeEEEEEEcCCCCC-CCCCCEEEEEEEEEECCCCEEEecCC----CCCCEEEEeCCCCccHHHHHHhc
Confidence 45667778899999999999999987 99999999999999889999999985 56799999999999999999999
Q ss_pred C------CCCCcEEEEEeeccccccCCCCCC-CCCCCCCCCceEEEEEEeeee
Q 006908 98 T------MLKGEVSMFKMKPQMHYGEDDCPV-AAPSTFPKDEELHFEIEMIDF 143 (626)
Q Consensus 98 ~------m~~Ge~~~~~ip~~~~~g~~~~~~-~~~~~i~~~~~lv~~v~l~~~ 143 (626)
+ |++|++++|.|||+++||..+.+. ..++.||||++++|+|+|+++
T Consensus 76 G~~~~~~m~~Ge~~~v~ip~~~aYG~~~~~~~~~~~~Ip~~~~l~f~vel~~i 128 (129)
T 1u79_A 76 GSDGIPPMLTGGKRTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIEYIGK 128 (129)
T ss_dssp CBTTBCCCBTTCEEEEEECGGGTTGGGCEEEETTEEEECTTCCEEEEEEEEEE
T ss_pred ccccccccCCCCEEEEEEChHHccCCCCCCccccCCcCCCCCeEEEEEEEEEe
Confidence 8 999999999999999999987520 012479999999999999986
No 26
>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens}
Probab=99.85 E-value=5.6e-21 Score=175.00 Aligned_cols=115 Identities=22% Similarity=0.329 Sum_probs=100.7
Q ss_pred ccccCceecCCce-EEEEEecCCCC-CCCCCCCEEEEEEEEEEcCCcEEEeeccCCCCCCcceEEEeCCCccchhHHhhc
Q 006908 19 DDKRRMKIVPGSL-MKAVMRPGGGD-STPSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGI 96 (626)
Q Consensus 19 ~~~~~~~~~~~gv-~~~i~~~G~G~-~~p~~gd~V~v~y~~~~~dG~~~~st~~~~~~~~~p~~~~lg~~~~~~gle~~l 96 (626)
++++.+ ++++|+ .|+++++|+|. ..|..||.|+|||++++.||++|+|+ .|+.|.+|.+++++||+++|
T Consensus 33 ~~~~~~-~~~sG~v~~~vl~~G~G~~~~p~~gd~V~v~Y~g~l~dG~~fds~--------~p~~f~lG~g~vi~G~eeaL 103 (157)
T 2jwx_A 33 PEEWLD-ILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEE--------PELVFTLGDCDVIQALDLSV 103 (157)
T ss_dssp CCSCEE-SSSSSSEEEEEEECCSTTSCCCCTTEEEEEEEEEECTTSCEEEEE--------EEEEEETTTTSSCHHHHHHT
T ss_pred ccccce-ECCCCCEEEEEEEccCCCccCCCCCCEEEEEEEEEECCCCEeecC--------CCEEEEeCCCChhHHHHHHH
Confidence 444444 455665 89999999997 34999999999999998899999974 48999999999999999999
Q ss_pred CCCCCCcEEEEEeeccccccCCC-CCCCCCCCCCCCceEEEEEEeeeeccc
Q 006908 97 PTMLKGEVSMFKMKPQMHYGEDD-CPVAAPSTFPKDEELHFEIEMIDFAKA 146 (626)
Q Consensus 97 ~~m~~Ge~~~~~ip~~~~~g~~~-~~~~~~~~i~~~~~lv~~v~l~~~~~~ 146 (626)
.+|++|++++|+||++++||..+ .+ +.|||+++|+|+|+|+++...
T Consensus 104 ~gMk~Ge~~~v~IP~~~aYG~~g~~~----~~IPp~stLiF~VeL~~i~~~ 150 (157)
T 2jwx_A 104 PLMDVGETAMVTADSKYCYGPQGSRS----PYIPPHAALCLEVTLKTAVDL 150 (157)
T ss_dssp TTSCTTCEEEEEECGGGTTTTTCCSS----SCCCTTCCEEEEEEEEEEEEC
T ss_pred cCCCCCCEEEEEECchhcCCcccccC----CCcCCCCeEEEEEEEEEEEcc
Confidence 99999999999999999999988 43 679999999999999999643
No 27
>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*
Probab=99.85 E-value=6.2e-21 Score=183.85 Aligned_cols=112 Identities=27% Similarity=0.467 Sum_probs=105.7
Q ss_pred CceecCCceEEEEEecCCCCCCCCCCCEEEEEEEEEEcCCcEEEeeccCCCCCCcceEEEeCCCccchhHHhhcCCCCCC
Q 006908 23 RMKIVPGSLMKAVMRPGGGDSTPSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTMLKG 102 (626)
Q Consensus 23 ~~~~~~~gv~~~i~~~G~G~~~p~~gd~V~v~y~~~~~dG~~~~st~~~~~~~~~p~~~~lg~~~~~~gle~~l~~m~~G 102 (626)
+.+++++|++|+++++|+|.. |..||.|+|||++++.||++|+||+. .+.|+.|.+|.+++++||+++|.+|++|
T Consensus 98 t~~~~~sGl~~~vl~~G~G~~-~~~gd~V~v~Y~g~l~dG~~fdss~~----~~~P~~f~lG~g~vi~G~eeaL~gM~~G 172 (209)
T 3uf8_A 98 TVVTTESGLKYEDLTEGSGAE-ARAGQTVSVHYTGWLTDGQKFDSSKD----RNDPFAFVLGGGMVIKGWDEGVQGMKVG 172 (209)
T ss_dssp CCEECTTSCEEEEEECCCSCB-CCTTCEEEEEEEEEETTSCEEEESGG----GTCCEEEETTSSSSCHHHHHHHTTCBTT
T ss_pred cccCCCCceEEEEEEcCCCCc-CCCCCEEEEEEEEEECCCCEEEEccc----cCCCEEEEeCCCccchhHHHHHhCCCCC
Confidence 467899999999999999987 99999999999999999999999987 6789999999999999999999999999
Q ss_pred cEEEEEeeccccccCCCCCCCCCCCCCCCceEEEEEEeeee
Q 006908 103 EVSMFKMKPQMHYGEDDCPVAAPSTFPKDEELHFEIEMIDF 143 (626)
Q Consensus 103 e~~~~~ip~~~~~g~~~~~~~~~~~i~~~~~lv~~v~l~~~ 143 (626)
++++|.|||++|||..+.+ +.|||+++|+|+|+|+++
T Consensus 173 e~~~v~Ipp~~aYG~~g~~----~~IP~~s~LvF~VeL~~I 209 (209)
T 3uf8_A 173 GVRRLTIPPQLGYGARGAA----GVIPPNATLVFEVELLDV 209 (209)
T ss_dssp CEEEEEECGGGTTTTTCBT----TTBCTTCCEEEEEEEEEC
T ss_pred CEEEEEECcHHhCCCCCCC----CCcCCCCeEEEEEEEEEC
Confidence 9999999999999999875 679999999999999875
No 28
>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*
Probab=99.85 E-value=1.1e-20 Score=166.47 Aligned_cols=106 Identities=23% Similarity=0.374 Sum_probs=98.6
Q ss_pred cccEEEEEeecCCCcCCCCCCCeEEEEEEEEeCCCcEEEecCC--------CccEEEEcCCCCccchHHHhhccCCCCcE
Q 006908 152 DFGVVKKVINEGQGWETPRAPYEVKAWISAKTGDGKLILSHRE--------GEPYFFTFGKSEVPKGLEMGIGTMTREEK 223 (626)
Q Consensus 152 D~~v~~~i~~~G~g~~~~~~g~~V~v~y~~~~~~g~~~~s~~~--------~~p~~~~~g~g~~~~gle~~l~~mk~Ge~ 223 (626)
..++.++++++|.|...|+.||.|+|||++++.||++|+++.. +.|+.|.+|.+++++||+++|.+|++|++
T Consensus 3 p~g~~~~il~~G~g~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~~~~~~~~p~~f~lG~~~~i~G~e~~l~gm~~Ge~ 82 (119)
T 3kz7_A 3 PPKYTKSILKKGDKTNFPKKGDVVHCWYTGTLPDGTVFDTNIQTSSKKKKNAKPLSFKVGVGKVIRGWDEALLTMSKGEK 82 (119)
T ss_dssp SCSEEEEEEECCCSSCCCCTTCEEEEEEEEECTTSCEEEECCCCSSSTTTTCCCEEEETTSSSSCHHHHHHHTTCCTTCE
T ss_pred CCccEEEEEEcCCCCCcCCCCCEEEEEEEEEECCCCEEEeccccccccccCCCCEEEEECCCChhHHHHHHHhCCCCCCE
Confidence 4589999999999977899999999999999999999998853 48999999999999999999999999999
Q ss_pred EEEEEeCCccCCCCCCC--CCCCcceEEEEEEEeeE
Q 006908 224 AVIYVTSQYLTPSPLMP--VVEGCEEVHFEVELVHL 257 (626)
Q Consensus 224 ~~~~v~~~~~~g~~~~~--~ip~~~~l~~~v~l~~~ 257 (626)
++|.|||+++||..+.+ .||++++|+|+|+|+++
T Consensus 83 ~~v~ip~~~aYG~~g~~~~~Ip~~~~l~f~veL~~i 118 (119)
T 3kz7_A 83 ARLEIEPEWAYGKKGQPDAKIPPNTKLIFEVELVDI 118 (119)
T ss_dssp EEEEECGGGTTCTTCBGGGTBCTTCCEEEEEEEEEE
T ss_pred EEEEECcHHhcCCCCCCCCccCcCCeEEEEEEEEEe
Confidence 99999999999987664 69999999999999986
No 29
>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.85 E-value=5.5e-21 Score=171.79 Aligned_cols=121 Identities=21% Similarity=0.309 Sum_probs=106.5
Q ss_pred CCCcccccCceecCCceEEEEEecCCCC-CCCCCCCEEEEEEEEEEcCCcEEEeeccCCCCCCcceEEEeCCCccchhHH
Q 006908 15 APSEDDKRRMKIVPGSLMKAVMRPGGGD-STPSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLL 93 (626)
Q Consensus 15 ~~~~~~~~~~~~~~~gv~~~i~~~G~G~-~~p~~gd~V~v~y~~~~~dG~~~~st~~~~~~~~~p~~~~lg~~~~~~gle 93 (626)
.++.++++.+++.+++++|+++++|+|. ..|+.||.|+|||++++.||++|+++ .|+.|.+|.+++++||+
T Consensus 3 ~~~~~~~~~~~~~~g~l~~~vl~~G~G~~~~~~~gd~V~v~Y~g~~~dG~~fds~--------~p~~f~lG~g~~i~G~e 74 (135)
T 2d9f_A 3 SGSSGEEWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEE--------PELVFTLGDCDVIQALD 74 (135)
T ss_dssp CSCCCSSCEESSSSSSSEEEEEECCCSSCCCCCTTSEEEEEEEEEESSSCEEEEE--------EEEEEETTSCCSCTTTT
T ss_pred CCCCcccCcEECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECCCCEEecC--------CCEEEEeCCCChhHHHH
Confidence 3445666777776666999999999997 34899999999999998899999963 48999999999999999
Q ss_pred hhcCCCCCCcEEEEEeeccccccCCC-CCCCCCCCCCCCceEEEEEEeeeecccc
Q 006908 94 EGIPTMLKGEVSMFKMKPQMHYGEDD-CPVAAPSTFPKDEELHFEIEMIDFAKAK 147 (626)
Q Consensus 94 ~~l~~m~~Ge~~~~~ip~~~~~g~~~-~~~~~~~~i~~~~~lv~~v~l~~~~~~~ 147 (626)
++|.+|++|++++|.|||+++||..+ .+ +.|||+++|+|+|+|+++....
T Consensus 75 ~~L~gm~~Ge~~~v~ip~~~aYG~~~~~~----~~Ip~~~~l~f~vel~~v~~~~ 125 (135)
T 2d9f_A 75 LSVPLMDVGETAMVTADSKYCYGPQGSRS----PYIPPHAALCLEVTLKTAVDRP 125 (135)
T ss_dssp TTGGGSCTTCEEEEEECHHHHTCTTCCSS----SCCCTTCCEEEEEEEEEEESSC
T ss_pred HHHhCCCCCCEEEEEEChhHccCcCCcCC----CccCCCCeEEEEEEEEEeecCC
Confidence 99999999999999999999999987 43 6799999999999999997544
No 30
>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A*
Probab=99.85 E-value=6.1e-21 Score=183.56 Aligned_cols=113 Identities=26% Similarity=0.439 Sum_probs=105.0
Q ss_pred cCceecCCceEEEEEecCCCCCCCCCCCEEEEEEEEEEcCCcEEEeeccCCCCCCcceEEEeCCCccchhHHhhcCCCCC
Q 006908 22 RRMKIVPGSLMKAVMRPGGGDSTPSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTMLK 101 (626)
Q Consensus 22 ~~~~~~~~gv~~~i~~~G~G~~~p~~gd~V~v~y~~~~~dG~~~~st~~~~~~~~~p~~~~lg~~~~~~gle~~l~~m~~ 101 (626)
...+++++|+.|+++++|+|.. |..||.|+|||++++.||++|++|+. .+.|+.|.+ +++|+||+++|.+|++
T Consensus 99 ~~v~~~~sGl~y~vl~~G~G~~-p~~gD~V~V~Y~g~l~dG~vfdss~~----~g~p~~f~l--g~vI~G~eeaL~gMk~ 171 (213)
T 1fd9_A 99 PGVVVLPSGLQYKVINSGNGVK-PGKSDTVTVEYTGRLIDGTVFDSTEK----TGKPATFQV--SQVIPGWTEALQLMPA 171 (213)
T ss_dssp TTEEECTTSCEEEEEECCCSCC-CCTTCEEEEEEEEEETTSCEEEEHHH----HCSCEEEEG--GGSCHHHHHHHTTCCT
T ss_pred CCcEECCCccEEEEEecCCCcc-CCCCCEEEEEEEEEECCCCEEeeccc----cCCCEEEEc--CchhhHHHHHHcCCCC
Confidence 4578899999999999999976 99999999999999999999999986 568999999 5899999999999999
Q ss_pred CcEEEEEeeccccccCCCCCCCCCCCCCCCceEEEEEEeeeecc
Q 006908 102 GEVSMFKMKPQMHYGEDDCPVAAPSTFPKDEELHFEIEMIDFAK 145 (626)
Q Consensus 102 Ge~~~~~ip~~~~~g~~~~~~~~~~~i~~~~~lv~~v~l~~~~~ 145 (626)
|++++|+|||+++||..+.+ +.|||+++|+|+|+|+++.+
T Consensus 172 Gek~~v~IP~~laYG~~g~~----~~Ipp~stLiF~VeLl~v~~ 211 (213)
T 1fd9_A 172 GSTWEIYVPSGLAYGPRSVG----GPIGPNETLIFKIHLISVKK 211 (213)
T ss_dssp TCEEEEEECGGGTTTTCCCS----SSCCTTCCEEEEEEEEEEEC
T ss_pred CCEEEEEECchhccCccCCC----CCCCCCCeEEEEEEEEEEEc
Confidence 99999999999999998864 67999999999999999863
No 31
>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A
Probab=99.85 E-value=7.7e-21 Score=166.95 Aligned_cols=113 Identities=22% Similarity=0.327 Sum_probs=100.6
Q ss_pred cccCceecCCceEEEEEecCCCC-CCCCCCCEEEEEEEEEEcCCcEEEeeccCCCCCCcceEEEeCCCccchhHHhhcCC
Q 006908 20 DKRRMKIVPGSLMKAVMRPGGGD-STPSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPT 98 (626)
Q Consensus 20 ~~~~~~~~~~gv~~~i~~~G~G~-~~p~~gd~V~v~y~~~~~dG~~~~st~~~~~~~~~p~~~~lg~~~~~~gle~~l~~ 98 (626)
+++.+++.+++++|+++++|+|. ..|+.||.|++||++++.||++|+++ .|+.|.+|.+++++||+++|.+
T Consensus 4 ~~~~~~~~~g~~~~~vl~~G~G~~~~~~~gd~V~v~y~g~~~dG~~~ds~--------~p~~f~lG~~~~i~g~e~~l~g 75 (118)
T 2awg_A 4 EEWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEE--------PELVFTLGDCDVIQALDLSVPL 75 (118)
T ss_dssp TCEEESSSSSSEEEEEEECCCTTCCCCCTTSEEEEEEEEECTTSCEEEEE--------EEEEEETTSSCSCHHHHHHGGG
T ss_pred ccceEECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECCCCEEECC--------CCEEEEECCCChhHHHHHHHhC
Confidence 34555555555999999999997 35899999999999998899999964 4899999999999999999999
Q ss_pred CCCCcEEEEEeeccccccCCCCCCCCCCCCCCCceEEEEEEeeeec
Q 006908 99 MLKGEVSMFKMKPQMHYGEDDCPVAAPSTFPKDEELHFEIEMIDFA 144 (626)
Q Consensus 99 m~~Ge~~~~~ip~~~~~g~~~~~~~~~~~i~~~~~lv~~v~l~~~~ 144 (626)
|++|++++|.|||+++||..+.+ +.|||+++++|+|+|+++.
T Consensus 76 m~~Ge~~~~~ip~~~ayG~~~~~----~~Ip~~~~l~f~v~l~~v~ 117 (118)
T 2awg_A 76 MDVGETAMVTADSKYCYGPQGRS----PYIPPHAALCLEVTLKTAV 117 (118)
T ss_dssp SCTTCEEEEEECGGGTTTTTCBT----TTBCTTCCEEEEEEEEEEE
T ss_pred CCCCCEEEEEEChHHccCCCCCC----CccCCCCeEEEEEEEEEec
Confidence 99999999999999999998875 6799999999999999874
No 32
>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} SCOP: d.26.1.0
Probab=99.85 E-value=5.4e-21 Score=183.65 Aligned_cols=110 Identities=22% Similarity=0.360 Sum_probs=102.1
Q ss_pred ccCceecCCceEEEEEecCCCCCCCCCCCEEEEEEEEEEcCCcEEEeeccCCCCCCcceEEEeCCCccchhHHhhcCCCC
Q 006908 21 KRRMKIVPGSLMKAVMRPGGGDSTPSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTML 100 (626)
Q Consensus 21 ~~~~~~~~~gv~~~i~~~G~G~~~p~~gd~V~v~y~~~~~dG~~~~st~~~~~~~~~p~~~~lg~~~~~~gle~~l~~m~ 100 (626)
..+.+++++||+|+++++|+|.. |..||.|+|||++++.||++|+|| . .|+.|.+| ++|+||+++|.+|+
T Consensus 109 ~~gv~~~~sGl~y~vl~~G~G~~-p~~gd~V~V~Y~g~l~dG~vfDss-~------~P~~f~lG--~vI~G~eeaL~gMk 178 (219)
T 3oe2_A 109 KPGVKELADGILMTELTPGTGPK-PDANGRVEVRYVGRLPDGKIFDQS-T------QPQWFRLD--SVISGWTSALQNMP 178 (219)
T ss_dssp STTCEECGGGCEEEEEECCCSCC-CCTTSEEEEEEEEECTTSCEEEEC-S------SCEEEEGG--GSCHHHHHHHTTCC
T ss_pred CCCcEECCCCeEEEEEecCCCcc-CCCCCEEEEEEEEEECCCCEeecc-C------CcEEEEec--chhHHHHHHHhCCC
Confidence 34578899999999999999986 999999999999999999999988 3 59999996 89999999999999
Q ss_pred CCcEEEEEeeccccccCCCCCCCCCCCCCCCceEEEEEEeeeec
Q 006908 101 KGEVSMFKMKPQMHYGEDDCPVAAPSTFPKDEELHFEIEMIDFA 144 (626)
Q Consensus 101 ~Ge~~~~~ip~~~~~g~~~~~~~~~~~i~~~~~lv~~v~l~~~~ 144 (626)
+|++++|+|||+++||..+.+ +.|||+++|+|+|+|++|+
T Consensus 179 ~Gek~~v~IPp~lAYG~~g~~----~~IPpnstLvFeVeLl~Ik 218 (219)
T 3oe2_A 179 TGAKWRLVIPSDQAYGAEGAG----DLIDPFTPLVFEIELIAVS 218 (219)
T ss_dssp TTCEEEEEECGGGTTTTTCBT----TTBCTTCCEEEEEEEEEEE
T ss_pred CCCEEEEEECchhcCCCCCCC----CCCCCCCeEEEEEEEEEEe
Confidence 999999999999999999874 6799999999999999985
No 33
>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}
Probab=99.85 E-value=1.6e-21 Score=178.91 Aligned_cols=88 Identities=23% Similarity=0.381 Sum_probs=81.9
Q ss_pred eecCCceEEEEEecCCCCC-CCCCCCEEEEEEEEEEcC--CcEEEeeccCCCCCCcceEEEeCCCccchhHHhhcCCCCC
Q 006908 25 KIVPGSLMKAVMRPGGGDS-TPSDGDQVAYHCTVRTLD--GVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTMLK 101 (626)
Q Consensus 25 ~~~~~gv~~~i~~~G~G~~-~p~~gd~V~v~y~~~~~d--G~~~~st~~~~~~~~~p~~~~lg~~~~~~gle~~l~~m~~ 101 (626)
+++++||.|+++++|+|.. .+..||.|+|||++++.| |++||||++ ++.|+.|.||.+++|+||+++|.+|++
T Consensus 6 ~~~~~Gv~~~vl~~G~G~~p~~~~G~~V~vhY~g~l~d~~G~~FDsS~~----rg~P~~f~lG~g~vI~Gwd~gl~~M~~ 81 (165)
T 2lkn_A 6 RLREDGIQKRVIQEGRGELPDFQDGTKATFHYRTLHSDDEGTVLDDSRA----RGKPMELIIGKKFKLPVWETIVCTMRE 81 (165)
T ss_dssp HHHTTSCCCCEEECCSSCCCCCCTTCEEEEECEEECSSSSCCEEEESTT----TTCCEEEESSSSCSCSHHHHHHTTCCT
T ss_pred cccCCCeEEEEEECCcCCCCCCCCCCEEEEEEEEEEeCCCccEEEeccc----CCCCEEEEecCCCccHHHHHHHhcCcc
Confidence 5789999999999999975 235799999999999854 999999997 789999999999999999999999999
Q ss_pred CcEEEEEeecccccc
Q 006908 102 GEVSMFKMKPQMHYG 116 (626)
Q Consensus 102 Ge~~~~~ip~~~~~g 116 (626)
|++++|+|||+++||
T Consensus 82 Ge~~~~~ipp~laYG 96 (165)
T 2lkn_A 82 GEIAQFLCDIKHVVL 96 (165)
T ss_dssp TCEEEEECCHHHHSS
T ss_pred CceEEEEECHHHhcC
Confidence 999999999999998
No 34
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.85 E-value=4.6e-21 Score=177.68 Aligned_cols=154 Identities=22% Similarity=0.412 Sum_probs=129.7
Q ss_pred hhhHHHHHHHHHhhhchhhccccHHHHHHHHHHHHHhcccC----CCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHH
Q 006908 391 FDGIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHV----NPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKS 466 (626)
Q Consensus 391 ~~e~~~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~----~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A 466 (626)
.+++++.+..+++.|+.+|+.|+|.+|+..|++|+..+... .|.+ ++...+......+|+|+|.||+++|+|.+|
T Consensus 4 ~~e~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~nla~~~~~~~~~~~A 82 (162)
T 3rkv_A 4 EDDKLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGE-PEWVELDRKNIPLYANMSQCYLNIGDLHEA 82 (162)
T ss_dssp ----CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTS-HHHHHHHHTHHHHHHHHHHHHHHHTCHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCH-HHHHHHHHHHHHHHHHHHHHHHhcCcHHHH
Confidence 35678899999999999999999999999999999965432 2333 334455677788999999999999999999
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Q 006908 467 IEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQEVESKARKQFKGLFD 545 (626)
Q Consensus 467 ~~~~~~aL~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 545 (626)
+.+|.++|.++|.++++||++|.+|..+|+|++|+.+|++|++++|++...++..|..+...++++.+++++.|++||+
T Consensus 83 ~~~~~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~f~ 161 (162)
T 3rkv_A 83 EETSSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTERRAEKKADSRVTYSKMFQ 161 (162)
T ss_dssp HHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHTTSSCC-------
T ss_pred HHHHHHHHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999984488999999999999999999999999996
No 35
>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}
Probab=99.84 E-value=2e-21 Score=178.39 Aligned_cols=119 Identities=24% Similarity=0.377 Sum_probs=98.0
Q ss_pred cCCCcEEEEEeeCCCCCCCCCCCCCCCeEEEEEEEEEecCCCcEEEeeccCCCCCCEEEEcCCCcchhhHHHHhhcCCCC
Q 006908 264 LGDGRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRLMLPG 343 (626)
Q Consensus 264 ~~dg~v~k~il~~G~G~~~~~~p~~~~~V~v~y~~~~~~~~g~~~~dt~~~~~~~p~~f~lG~~~v~~gle~~l~~M~~G 343 (626)
+.+.+|+|+++++|.|..|. +..|++|+|||+|++.|.+|++| ||+.+ +++|+.|.+|.++||+||+.+|.+|++|
T Consensus 7 ~~~~Gv~~~vl~~G~G~~p~--~~~G~~V~vhY~g~l~d~~G~~F-DsS~~-rg~P~~f~lG~g~vI~Gwd~gl~~M~~G 82 (165)
T 2lkn_A 7 LREDGIQKRVIQEGRGELPD--FQDGTKATFHYRTLHSDDEGTVL-DDSRA-RGKPMELIIGKKFKLPVWETIVCTMREG 82 (165)
T ss_dssp HHTTSCCCCEEECCSSCCCC--CCTTCEEEEECEEECSSSSCCEE-EESTT-TTCCEEEESSSSCSCSHHHHHHTTCCTT
T ss_pred ccCCCeEEEEEECCcCCCCC--CCCCCEEEEEEEEEEeCCCccEE-Eeccc-CCCCEEEEecCCCccHHHHHHHhcCccC
Confidence 35678999999999998652 25799999999999988779999 55555 6899999999999999999999999999
Q ss_pred CEEEEEecCCCcccc--------CCCCCCC-----------------------------CCCcceeeeeeecccccCCCC
Q 006908 344 EIALVTCPPDYAYDK--------FLRPANV-----------------------------PEGAHIQWEIELLGFEKPKDW 386 (626)
Q Consensus 344 E~~~~~i~~~~ayg~--------~~~~~~i-----------------------------p~~~~l~~~vel~~~~~~~~~ 386 (626)
|++.|+|||++|||. ......+ ++.++|+|+|||++|+.|.++
T Consensus 83 e~~~~~ipp~laYG~p~v~~~~r~~~~~~~p~~~~~~~~g~~~~~~~~~~g~~d~~~li~~p~~L~FeIELl~Ve~P~ey 162 (165)
T 2lkn_A 83 EIAQFLCDIKHVVLYPLVAKSLRNIAVGKDPLEGQRHCCGVAQMREHSSLGHADLDALQQNPQPLIFHMEMLKVESPGTY 162 (165)
T ss_dssp CEEEEECCHHHHSSHHHHHHHHTTGGGSSTTTTTCSCCSSCCSCCCCCCCCCSTTTHHHHSCCCCEEEEEEEEEECTTTC
T ss_pred ceEEEEECHHHhcCCcchhhhhhhccccCCCccccccceeeeeccccccccccccccccCCCCCeEEEEEEEEEcCCccc
Confidence 999999999999992 1111112 223679999999999988754
No 36
>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A
Probab=99.84 E-value=2.3e-20 Score=169.51 Aligned_cols=108 Identities=31% Similarity=0.461 Sum_probs=101.4
Q ss_pred ccccEEEEEeecCCCcCCCCCCCeEEEEEEEEeCCCcEEEecC-CCccEEEEcCCCCccchHHHhhccCCCCcEEEEEEe
Q 006908 151 DDFGVVKKVINEGQGWETPRAPYEVKAWISAKTGDGKLILSHR-EGEPYFFTFGKSEVPKGLEMGIGTMTREEKAVIYVT 229 (626)
Q Consensus 151 ~D~~v~~~i~~~G~g~~~~~~g~~V~v~y~~~~~~g~~~~s~~-~~~p~~~~~g~g~~~~gle~~l~~mk~Ge~~~~~v~ 229 (626)
.|.++++.++++|.|...|..||.|+|||++++.||++|+++. ++.|+.|.+|.+++|+||+++|.+|++|++++|.||
T Consensus 33 ~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~~i~G~e~~l~gm~~Ge~~~v~ip 112 (144)
T 3o5e_A 33 KDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCK 112 (144)
T ss_dssp CSSSEEEEEEECCBSSCCCCTTCEEEEEEEEECTTSCEEEESGGGTSCEEEETTSSSSCHHHHHHHTTCCBTCEEEEEEC
T ss_pred CCCeEEEEEEECCCCCccCCCCCEEEEEEEEEECCCCEEEeecccCCCeEEEeCCCcccHHHHHHHhCCCCCCEEEEEEC
Confidence 7899999999999996689999999999999999999999885 578999999999999999999999999999999999
Q ss_pred CCccCCCCCC-CCCCCcceEEEEEEEeeEE
Q 006908 230 SQYLTPSPLM-PVVEGCEEVHFEVELVHLI 258 (626)
Q Consensus 230 ~~~~~g~~~~-~~ip~~~~l~~~v~l~~~~ 258 (626)
|+++||..+. +.||++++|+|+|+|+++.
T Consensus 113 p~~aYG~~g~~~~Ipp~~~L~f~VeL~~ik 142 (144)
T 3o5e_A 113 PEYAYGSAGSLPKIPSNATLFFEIELLDFK 142 (144)
T ss_dssp GGGTTTTTCBTTTBCTTCCEEEEEEEEEEE
T ss_pred hHHCcCCCCCCCCcCCCCeEEEEEEEEEec
Confidence 9999998654 6899999999999999985
No 37
>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A
Probab=99.83 E-value=3.1e-20 Score=165.41 Aligned_cols=109 Identities=30% Similarity=0.455 Sum_probs=101.5
Q ss_pred cccccEEEEEeecCCCcCCCCCCCeEEEEEEEEeCCCcEEEecC-CCccEEEEcCCCCccchHHHhhccCCCCcEEEEEE
Q 006908 150 ADDFGVVKKVINEGQGWETPRAPYEVKAWISAKTGDGKLILSHR-EGEPYFFTFGKSEVPKGLEMGIGTMTREEKAVIYV 228 (626)
Q Consensus 150 ~~D~~v~~~i~~~G~g~~~~~~g~~V~v~y~~~~~~g~~~~s~~-~~~p~~~~~g~g~~~~gle~~l~~mk~Ge~~~~~v 228 (626)
..|.++.+.++++|.|...|+.||.|+|||++++.||++|+++. ++.|+.|.+|.+++++||+++|.+|++|++++|.|
T Consensus 16 ~~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~~i~G~e~~l~gm~~Ge~~~v~i 95 (128)
T 3o5q_A 16 KKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLC 95 (128)
T ss_dssp SCSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHTTCCTTCEEEEEE
T ss_pred cCCCCEEEEEEECCCCCccCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEECCCCccHHHHHHHhcCCCCCEEEEEE
Confidence 37889999999999996689999999999999999999999885 47899999999999999999999999999999999
Q ss_pred eCCccCCCCCC-CCCCCcceEEEEEEEeeEE
Q 006908 229 TSQYLTPSPLM-PVVEGCEEVHFEVELVHLI 258 (626)
Q Consensus 229 ~~~~~~g~~~~-~~ip~~~~l~~~v~l~~~~ 258 (626)
||+++||..+. +.||++++|+|+|+|+++.
T Consensus 96 p~~~aYG~~g~~~~Ip~~~~l~f~vel~~i~ 126 (128)
T 3o5q_A 96 KPEYAYGSAGSLPKIPSNATLFFEIELLDFK 126 (128)
T ss_dssp CGGGTTTTTCBTTTBCTTCCEEEEEEEEEEE
T ss_pred ChHHcCCCCCCCCCcCCCCEEEEEEEEEEec
Confidence 99999998654 6899999999999999985
No 38
>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}
Probab=99.83 E-value=4.3e-20 Score=164.00 Aligned_cols=110 Identities=18% Similarity=0.219 Sum_probs=101.8
Q ss_pred ccccccEEEEEeecCCC-cCCCCCCCeEEEEEEEEeC-CCcEEEecC---CCccEEEEcCCCCccchHHHhhccCCCCcE
Q 006908 149 IADDFGVVKKVINEGQG-WETPRAPYEVKAWISAKTG-DGKLILSHR---EGEPYFFTFGKSEVPKGLEMGIGTMTREEK 223 (626)
Q Consensus 149 v~~D~~v~~~i~~~G~g-~~~~~~g~~V~v~y~~~~~-~g~~~~s~~---~~~p~~~~~g~g~~~~gle~~l~~mk~Ge~ 223 (626)
...+.++.++++++|.+ ...|+.||.|+|||++++. ||++|+++. .+.|+.|.+|.+++++||+++|.+|++|++
T Consensus 8 ~~~~~gl~~~~l~~g~~~g~~~~~gd~V~v~Y~g~~~~dG~~fdss~~~~~~~p~~f~lG~~~~i~G~e~~l~gm~~Ge~ 87 (125)
T 4dip_A 8 LIPEPEVKIEVLQKPFICHRKTKGGDLMLVHYEGYLEKDGSLFHSTHKHNNGQPIWFTLGILEALKGWDQGLKGMCVGEK 87 (125)
T ss_dssp GCCCCCCEEEEEECCSCCSCCCCTTCEEEEEEEEEETTTCCEEEEHHHHTTTCCEEEETTSCSSCHHHHHHSTTCCTTCE
T ss_pred EECCCCeEEEEEEcCCCCCCcCCCCCEEEEEEEEEECCCCcEEEEcccCCCCcCEEEEeCCCChhHHHHHHHhCCCCCCE
Confidence 34677999999999983 2899999999999999998 999999885 579999999999999999999999999999
Q ss_pred EEEEEeCCccCCCCCCCCCCCcceEEEEEEEeeEE
Q 006908 224 AVIYVTSQYLTPSPLMPVVEGCEEVHFEVELVHLI 258 (626)
Q Consensus 224 ~~~~v~~~~~~g~~~~~~ip~~~~l~~~v~l~~~~ 258 (626)
++|.|||+++||..+.+.||++++|+|+|+|+++.
T Consensus 88 ~~~~ip~~~aYG~~g~~~Ip~~~~l~f~vel~~i~ 122 (125)
T 4dip_A 88 RKLIIPPALGYGKEGKGKIPPESTLIFNIDLLEIR 122 (125)
T ss_dssp EEEEECGGGTTTTTCBTTBCTTCCEEEEEEEEEEE
T ss_pred EEEEEChHHhcCCCCCCCCCCCCeEEEEEEEEEEE
Confidence 99999999999998878999999999999999985
No 39
>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A
Probab=99.83 E-value=3.9e-20 Score=179.16 Aligned_cols=110 Identities=25% Similarity=0.545 Sum_probs=102.2
Q ss_pred cCceecCCceEEEEEecCCCCCCCCCCCEEEEEEEEEEcCCcEEEeeccCCCCCCcceEEEeCCCccchhHHhhcCCCCC
Q 006908 22 RRMKIVPGSLMKAVMRPGGGDSTPSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTMLK 101 (626)
Q Consensus 22 ~~~~~~~~gv~~~i~~~G~G~~~p~~gd~V~v~y~~~~~dG~~~~st~~~~~~~~~p~~~~lg~~~~~~gle~~l~~m~~ 101 (626)
...+++++|+.|+++++|+|.. |..||.|+|||++++.||++|+||+. .+.|+.|.+ +++|+||+++|.+|++
T Consensus 114 ~~v~~~~sGl~y~vl~~G~G~~-p~~gD~V~V~Y~g~l~dG~vfdss~~----~g~p~~f~l--g~vI~G~eeaL~gMk~ 186 (224)
T 1q6h_A 114 KGVKTSSTGLVYQVVEAGKGEA-PKDSDTVVVNYKGTLIDGKEFDNSYT----RGEPLSFRL--DGVIPGWTEGLKNIKK 186 (224)
T ss_dssp TTEEECTTSCEEEEEECCSSCC-CCTTCEEEEEEEEEETTSCEEEEGGG----GTSCEEEEG--GGSCHHHHHHGGGSCT
T ss_pred CCeEECCCceEEEEEecccCcc-ccCCCEEEEEEEEEeCCCCEEeeccc----cCCCEEEEc--CCcchhHHHHHcCCCC
Confidence 4567789999999999999986 99999999999999999999999986 668999999 5899999999999999
Q ss_pred CcEEEEEeeccccccCCCCCCCCCCCCCCCceEEEEEEeeee
Q 006908 102 GEVSMFKMKPQMHYGEDDCPVAAPSTFPKDEELHFEIEMIDF 143 (626)
Q Consensus 102 Ge~~~~~ip~~~~~g~~~~~~~~~~~i~~~~~lv~~v~l~~~ 143 (626)
|++++|+|||+++||..+.+ + ||||++|+|+|+|+++
T Consensus 187 Gek~~v~IP~~laYG~~g~~----~-IPp~stLiF~VeL~~i 223 (224)
T 1q6h_A 187 GGKIKLVIPPELAYGKAGVP----G-IPPNSTLVFDVELLDV 223 (224)
T ss_dssp TCEEEEEECGGGTTTTTCBT----T-BCTTCCEEEEEEEEEE
T ss_pred CCEEEEEECchhhcCcCCCC----C-CCCCCEEEEEEEEEEe
Confidence 99999999999999998863 4 9999999999999987
No 40
>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana}
Probab=99.83 E-value=4.2e-20 Score=173.87 Aligned_cols=126 Identities=29% Similarity=0.434 Sum_probs=100.6
Q ss_pred CCcEEEEEeeCCCCCCCCCCCCCCCeEEEEEEEEEecCCCcEEEeeccCCCCCCEEEEcCCC-cchhhHHHHhhcCCCCC
Q 006908 266 DGRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEG-LVPEGFEMCVRLMLPGE 344 (626)
Q Consensus 266 dg~v~k~il~~G~G~~~~~~p~~~~~V~v~y~~~~~~~~g~~~~dt~~~~~~~p~~f~lG~~-~v~~gle~~l~~M~~GE 344 (626)
+++|.++++++|.|.. |..|+.|+|||++++.+ +|++|+ +++. +++|+.|.+|.+ .+++||+.+|.+|++||
T Consensus 48 ~~gl~~~vl~~G~G~~----~~~Gd~V~v~Y~g~l~~-dG~~fd-ss~~-~~~p~~f~lG~g~~vi~G~eeaL~gMk~Ge 120 (180)
T 2f4e_A 48 DEKVSKQIIKEGHGSK----PSKYSTCFLHYRAWTKN-SQHKFE-DTWH-EQQPIELVLGKEKKELAGLAIGVASMKSGE 120 (180)
T ss_dssp ETTEEEEEEECCBSCC----BCTTCEEEEEEEEEETT-TCCEEE-ETTT-TTCCEEEETTSCCGGGHHHHHHHTTCCBTC
T ss_pred CCceEEEEEeCCCCCC----CCCCCEEEEEEEEEECC-CCcEEe-ccCc-cCCCEEEEeCCCCchhHHHHHHHhCCCCCC
Confidence 3679999999999975 47899999999999874 488884 4444 478999999999 99999999999999999
Q ss_pred EEEEEecCCCccccCCC--CCCCCCCcceeeeeeecccccCCC---CCCCChhhHHHHH
Q 006908 345 IALVTCPPDYAYDKFLR--PANVPEGAHIQWEIELLGFEKPKD---WTGLSFDGIMDEA 398 (626)
Q Consensus 345 ~~~~~i~~~~ayg~~~~--~~~ip~~~~l~~~vel~~~~~~~~---~~~~~~~e~~~~a 398 (626)
++.|+|||+++||..+. ++.||++++++|+|+|+++..+.+ .|.|+.++++..|
T Consensus 121 ~~~v~iPp~~aYG~~g~~~~~~Ip~~s~l~F~VeL~~v~~~~e~~~~~~mt~eErl~~A 179 (180)
T 2f4e_A 121 RALVHVGWELAYGKEGNFSFPNVPPMADLLYEVEVIGFDETKEGKARSDMTVEERIGAA 179 (180)
T ss_dssp EEEEEECGGGTTTTTCBSSSSCBCTTCCEEEEEEEEEESCBCCC---------------
T ss_pred EEEEEECchHhCCcCCcccCCCcCCCCeEEEEEEEEEEecCccccccccCCHHHHHhhc
Confidence 99999999999999886 467999999999999999998776 7889999998876
No 41
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1
Probab=99.82 E-value=1.2e-19 Score=158.08 Aligned_cols=106 Identities=23% Similarity=0.323 Sum_probs=97.5
Q ss_pred cccEEEEEeecCCCcCCCCCCCeEEEEEEEEeCCCcEEEecCC-CccEEEEcCCCCccchHHHhhccCCCCcEEEEEEeC
Q 006908 152 DFGVVKKVINEGQGWETPRAPYEVKAWISAKTGDGKLILSHRE-GEPYFFTFGKSEVPKGLEMGIGTMTREEKAVIYVTS 230 (626)
Q Consensus 152 D~~v~~~i~~~G~g~~~~~~g~~V~v~y~~~~~~g~~~~s~~~-~~p~~~~~g~g~~~~gle~~l~~mk~Ge~~~~~v~~ 230 (626)
+.|+.++++++|.|...|+.||.|++||++++.||++|+++.. +.|+.|.+|.+++++||+++|.+|++|++++|.|||
T Consensus 5 ~~g~~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~~~i~g~e~~l~gm~~Ge~~~v~ip~ 84 (113)
T 1yat_A 5 EGNVKIDRISPGDGATFPKTGDLVTIHYTGTLENGQKFDSSVDRGSPFQCNIGVGQVIKGWDVGIPKLSVGEKARLTIPG 84 (113)
T ss_dssp GGGCEEEEEECCCSSCCCCTTCEEEEEEEEEETTSCEEEESTTTTCCEEEETTSSSSCHHHHHHGGGCCTTCEEEEEECG
T ss_pred CCCeEEEEEECCCCcccCCCCCEEEEEEEEEECCCCEEEecCCCCCcEEEEeCCCCccHHHHHHHhCCCCCCEEEEEECH
Confidence 5689999999999944499999999999999999999998864 689999999999999999999999999999999999
Q ss_pred CccCCCCC-CCCCCCcceEEEEEEEeeE
Q 006908 231 QYLTPSPL-MPVVEGCEEVHFEVELVHL 257 (626)
Q Consensus 231 ~~~~g~~~-~~~ip~~~~l~~~v~l~~~ 257 (626)
+++||..+ .+.||++++|+|+|+|+++
T Consensus 85 ~~ayG~~~~~~~Ip~~~~l~f~vel~~i 112 (113)
T 1yat_A 85 PYAYGPRGFPGLIPPNSTLVFDVELLKV 112 (113)
T ss_dssp GGTTTTTCBTTTBCTTCCEEEEEEEEEE
T ss_pred HHCcCCCCCCCCcCCCCeEEEEEEEEEe
Confidence 99999865 3569999999999999986
No 42
>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...
Probab=99.82 E-value=1.1e-19 Score=156.81 Aligned_cols=104 Identities=27% Similarity=0.439 Sum_probs=95.7
Q ss_pred cEEEEEeecCCCcCCCCCCCeEEEEEEEEeCCCcEEEecC-CCccEEEEcCCCCccchHHHhhccCCCCcEEEEEEeCCc
Q 006908 154 GVVKKVINEGQGWETPRAPYEVKAWISAKTGDGKLILSHR-EGEPYFFTFGKSEVPKGLEMGIGTMTREEKAVIYVTSQY 232 (626)
Q Consensus 154 ~v~~~i~~~G~g~~~~~~g~~V~v~y~~~~~~g~~~~s~~-~~~p~~~~~g~g~~~~gle~~l~~mk~Ge~~~~~v~~~~ 232 (626)
|+.++++++|.|...|+.||.|++||++++.||++|+++. ++.|+.|.+|.+++++||+++|.+|++|++++|.|||++
T Consensus 1 Gl~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~~~ip~~~ 80 (107)
T 2ppn_A 1 GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDY 80 (107)
T ss_dssp CEEEEEEECCCSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSCCSCHHHHHHHTTCCTTCEEEEEECGGG
T ss_pred CcEEEEEECcCCCcCCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEeCCCChHHHHHHHHhCCCCCCEEEEEECHHH
Confidence 5789999999995559999999999999999999999885 368999999999999999999999999999999999999
Q ss_pred cCCCCCC-CCCCCcceEEEEEEEeeE
Q 006908 233 LTPSPLM-PVVEGCEEVHFEVELVHL 257 (626)
Q Consensus 233 ~~g~~~~-~~ip~~~~l~~~v~l~~~ 257 (626)
+||..+. +.||++++++|+|+|+++
T Consensus 81 ayG~~~~~~~Ip~~~~l~f~v~l~~v 106 (107)
T 2ppn_A 81 AYGATGHPGIIPPHATLVFDVELLKL 106 (107)
T ss_dssp TTTTTCBTTTBCTTCCEEEEEEEEEE
T ss_pred ccCCCCCCCCcCCCCeEEEEEEEEEe
Confidence 9998653 569999999999999986
No 43
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*
Probab=99.82 E-value=1.2e-19 Score=162.18 Aligned_cols=108 Identities=23% Similarity=0.321 Sum_probs=99.4
Q ss_pred ccccccEEEEEeecCCCcCCCCCCCeEEEEEEEEeCCCcEEEecC-CCccEEEEcCCCCccchHHHhhccCCCCcEEEEE
Q 006908 149 IADDFGVVKKVINEGQGWETPRAPYEVKAWISAKTGDGKLILSHR-EGEPYFFTFGKSEVPKGLEMGIGTMTREEKAVIY 227 (626)
Q Consensus 149 v~~D~~v~~~i~~~G~g~~~~~~g~~V~v~y~~~~~~g~~~~s~~-~~~p~~~~~g~g~~~~gle~~l~~mk~Ge~~~~~ 227 (626)
...+.++.+.++++|.| ..|+.||.|+|||++++.||++|+++. ++.|+.|.+|.+++++||+++|.+|++||+++|.
T Consensus 24 ~~~~~gl~~~~l~~G~G-~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G~eeaL~gmk~Ge~~~v~ 102 (133)
T 2y78_A 24 VTTESGLKYEDLTEGSG-AEARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLT 102 (133)
T ss_dssp EECTTSCEEEEEECCSS-CBCCTTSEEEEEEEEEETTSCEEEETTTTTCCEEEETTSSSSCHHHHHHSTTCBTTCEEEEE
T ss_pred EECCCCEEEEEEEcCCC-CCCCCCCEEEEEEEEEECCCCEEeccCcCCCCEEEEeCCCChhHHHHHHHcCCCCCCEEEEE
Confidence 34677999999999999 889999999999999999999999886 4699999999999999999999999999999999
Q ss_pred EeCCccCCCCCC-CCCCCcceEEEEEEEeeE
Q 006908 228 VTSQYLTPSPLM-PVVEGCEEVHFEVELVHL 257 (626)
Q Consensus 228 v~~~~~~g~~~~-~~ip~~~~l~~~v~l~~~ 257 (626)
|||+++||..+. +.||++++|+|+|+|+++
T Consensus 103 ip~~~aYG~~~~~~~Ipp~~~l~f~VeL~~I 133 (133)
T 2y78_A 103 IPPQLGYGARGAGGVIPPNATLVFEVELLDV 133 (133)
T ss_dssp ECGGGTTTTTCBTTTBCTTCCEEEEEEEEEC
T ss_pred ECcHHhCCCCCCCCCCCCCCeEEEEEEEEEC
Confidence 999999998765 459999999999999874
No 44
>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} SCOP: d.26.1.0
Probab=99.81 E-value=1.6e-19 Score=173.50 Aligned_cols=104 Identities=19% Similarity=0.284 Sum_probs=97.9
Q ss_pred cccccEEEEEeecCCCcCCCCCCCeEEEEEEEEeCCCcEEEecCCCccEEEEcCCCCccchHHHhhccCCCCcEEEEEEe
Q 006908 150 ADDFGVVKKVINEGQGWETPRAPYEVKAWISAKTGDGKLILSHREGEPYFFTFGKSEVPKGLEMGIGTMTREEKAVIYVT 229 (626)
Q Consensus 150 ~~D~~v~~~i~~~G~g~~~~~~g~~V~v~y~~~~~~g~~~~s~~~~~p~~~~~g~g~~~~gle~~l~~mk~Ge~~~~~v~ 229 (626)
+.++|+.++++++|+| ..|..||.|+|||++++.||++|+|+ +.|+.|.+| ++||||+++|.+|++|++++|+||
T Consensus 114 ~~~sGl~y~vl~~G~G-~~p~~gd~V~V~Y~g~l~dG~vfDss--~~P~~f~lG--~vI~G~eeaL~gMk~Gek~~v~IP 188 (219)
T 3oe2_A 114 ELADGILMTELTPGTG-PKPDANGRVEVRYVGRLPDGKIFDQS--TQPQWFRLD--SVISGWTSALQNMPTGAKWRLVIP 188 (219)
T ss_dssp ECGGGCEEEEEECCCS-CCCCTTSEEEEEEEEECTTSCEEEEC--SSCEEEEGG--GSCHHHHHHHTTCCTTCEEEEEEC
T ss_pred ECCCCeEEEEEecCCC-ccCCCCCEEEEEEEEEECCCCEeecc--CCcEEEEec--chhHHHHHHHhCCCCCCEEEEEEC
Confidence 4678999999999999 78999999999999999999999998 799999997 899999999999999999999999
Q ss_pred CCccCCCCCCC-CCCCcceEEEEEEEeeEE
Q 006908 230 SQYLTPSPLMP-VVEGCEEVHFEVELVHLI 258 (626)
Q Consensus 230 ~~~~~g~~~~~-~ip~~~~l~~~v~l~~~~ 258 (626)
|+++||..+.+ .|||+++|+|+|+|+++.
T Consensus 189 p~lAYG~~g~~~~IPpnstLvFeVeLl~Ik 218 (219)
T 3oe2_A 189 SDQAYGAEGAGDLIDPFTPLVFEIELIAVS 218 (219)
T ss_dssp GGGTTTTTCBTTTBCTTCCEEEEEEEEEEE
T ss_pred chhcCCCCCCCCCCCCCCeEEEEEEEEEEe
Confidence 99999988765 499999999999999985
No 45
>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A
Probab=99.80 E-value=5.2e-19 Score=157.86 Aligned_cols=110 Identities=26% Similarity=0.431 Sum_probs=98.5
Q ss_pred cccccEEEEEeecC-CC-cCCCCCCCeEEEEEEEEe-CCCcEEEecC-CCccEEEEcCCCCccchHHHhhccCCCCcEEE
Q 006908 150 ADDFGVVKKVINEG-QG-WETPRAPYEVKAWISAKT-GDGKLILSHR-EGEPYFFTFGKSEVPKGLEMGIGTMTREEKAV 225 (626)
Q Consensus 150 ~~D~~v~~~i~~~G-~g-~~~~~~g~~V~v~y~~~~-~~g~~~~s~~-~~~p~~~~~g~g~~~~gle~~l~~mk~Ge~~~ 225 (626)
+.++.+.+.++++| .| ...|+.||.|+|||++++ .+|++|+++. .+.|+.|.+|.+++++||+++|.+|++|++++
T Consensus 13 ~~~g~~~~~il~~G~~g~g~~~~~gd~V~v~Y~g~~~~dG~~fd~s~~~~~p~~f~lG~g~~i~g~e~~l~gm~~Ge~~~ 92 (129)
T 2vn1_A 13 TADGGVIKTILKKGDEGEENIPKKGNEVTVHYVGKLESTGKVFDSSFDRNVPFKFHLEQGEVIKGWDICVSSMRKNEKCL 92 (129)
T ss_dssp STTSSEEEEEEECCCCSGGGSCCTTCEEEEEEEEEETTTCCEEEEGGGTTCCEEEETTSSSSCHHHHHHHTTCCTTCEEE
T ss_pred CCCCCEEEEEEeCCCCCCCCcCCCCCEEEEEEEEEECCCCeEEEecCCCCccEEEEeCCCCcCHHHHHHHhCCCCCCEEE
Confidence 35666778899987 55 488999999999999998 7999999886 46899999999999999999999999999999
Q ss_pred EEEeCCccCCCCCC-CCCCCcceEEEEEEEeeEEe
Q 006908 226 IYVTSQYLTPSPLM-PVVEGCEEVHFEVELVHLIQ 259 (626)
Q Consensus 226 ~~v~~~~~~g~~~~-~~ip~~~~l~~~v~l~~~~~ 259 (626)
|.|||+++||..+. +.||++++|+|+|+|+++.+
T Consensus 93 v~ip~~~aYG~~~~~~~Ip~~~~l~f~vel~~v~~ 127 (129)
T 2vn1_A 93 VRIESMYGYGDEGCGESIPGNSVLLFEIELLSFRE 127 (129)
T ss_dssp EEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC
T ss_pred EEEChHHcCCCCCCCCCcCCCCeEEEEEEEEEEec
Confidence 99999999998654 56999999999999999864
No 46
>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens}
Probab=99.80 E-value=9e-20 Score=163.61 Aligned_cols=109 Identities=27% Similarity=0.333 Sum_probs=94.2
Q ss_pred cccccccEEEEEeecCCCcCCCCCCCeEEEEEEEEeC-CCcEEEecC-CCccEEEEcCCCCccchHHHhhccCCCCcEEE
Q 006908 148 IIADDFGVVKKVINEGQGWETPRAPYEVKAWISAKTG-DGKLILSHR-EGEPYFFTFGKSEVPKGLEMGIGTMTREEKAV 225 (626)
Q Consensus 148 ~v~~D~~v~~~i~~~G~g~~~~~~g~~V~v~y~~~~~-~g~~~~s~~-~~~p~~~~~g~g~~~~gle~~l~~mk~Ge~~~ 225 (626)
+++.+.++.++++++|.| ..+..||.|+|||++++. +|++|+++. ++.|+.|.+|.+++++||++||.+|++|++++
T Consensus 21 ~v~~~~gl~~~vl~~G~g-~~~~~gd~V~v~Y~g~l~~~G~~fdss~~~~~p~~f~lG~g~~i~G~e~aL~gm~~Ge~~~ 99 (134)
T 3b7x_A 21 DISGDRGVLKDVIREGAG-DLVAPDASVLVKYSGYLEHMDRPFDSNYFRKTPRLMKLGEDITLWGMELGLLSMRRGELAR 99 (134)
T ss_dssp ESSSSSSEEEEEEECCEE-EECCTTCEEEEEEEEECTTCSSCSEEC-------CEEC-CCCCCHHHHHHHHTCEETCEEE
T ss_pred eeeCCCCEEEEEEEcCCC-CCCCCCCEEEEEEEEEECCCCeEEEecCCCCCCEEEEcCCcchhHHHHHHHhCCCCCCEEE
Confidence 455788999999999999 678889999999999987 699999885 46899999999999999999999999999999
Q ss_pred EEEeCCccCCCCCC-CCCCCcceEEEEEEEeeE
Q 006908 226 IYVTSQYLTPSPLM-PVVEGCEEVHFEVELVHL 257 (626)
Q Consensus 226 ~~v~~~~~~g~~~~-~~ip~~~~l~~~v~l~~~ 257 (626)
|.|||+++||..+. +.||++++|+|+|+|+++
T Consensus 100 v~ip~~~aYG~~~~~~~Ip~~~~l~f~VeL~~i 132 (134)
T 3b7x_A 100 FLFKPNYAYGTLGCPPLIPPNTTVLFEIELLDF 132 (134)
T ss_dssp EEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEE
T ss_pred EEECHHHCcCCCCCCCCcCcCCeEEEEEEEEEE
Confidence 99999999998654 569999999999999997
No 47
>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.80 E-value=4.6e-19 Score=151.45 Aligned_cols=96 Identities=25% Similarity=0.476 Sum_probs=88.8
Q ss_pred CCCCCCCEEEEEEEEEEcCCcEEEeeccCCCCCCcceEEEeCCCccchhHHhhcCCCCCCcEEEEEeeccccccCCCCCC
Q 006908 43 STPSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTMLKGEVSMFKMKPQMHYGEDDCPV 122 (626)
Q Consensus 43 ~~p~~gd~V~v~y~~~~~dG~~~~st~~~~~~~~~p~~~~lg~~~~~~gle~~l~~m~~Ge~~~~~ip~~~~~g~~~~~~ 122 (626)
..|+.||.|+|||++++.||++|++|+. .+.|+.|.+|.+++++||+++|.+|++|++++|.|||+++||..+.+
T Consensus 4 ~~~~~gd~V~v~y~~~~~dG~~~d~s~~----~~~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~v~ip~~~ayG~~~~~- 78 (102)
T 2pbc_A 4 IKSRKGDVLHMHYTGKLEDGTEFDSSLP----QNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAP- 78 (102)
T ss_dssp CCCCTTCEEEEEEEEECTTSCEEEESTT----TTCCEEEETTSSSSCHHHHTTSTTCCTTCEEEEEECGGGTTTTTCBT-
T ss_pred CcCCCCCEEEEEEEEEECCCCEEEeCCC----CCCCEEEEeCCCCccHHHHHHHhCCCCCCEEEEEECHHHCcCCCCCC-
Confidence 3489999999999999889999999986 56899999999999999999999999999999999999999998874
Q ss_pred CCCCCCCCCceEEEEEEeeeeccc
Q 006908 123 AAPSTFPKDEELHFEIEMIDFAKA 146 (626)
Q Consensus 123 ~~~~~i~~~~~lv~~v~l~~~~~~ 146 (626)
+.||++++++|+|+|+++.+.
T Consensus 79 ---~~Ip~~~~l~f~v~l~~v~~~ 99 (102)
T 2pbc_A 79 ---PKIPGGATLVFEVELLKIERR 99 (102)
T ss_dssp ---TTBCTTCCEEEEEEEEEEGGG
T ss_pred ---CCcCcCCeEEEEEEEEEeccc
Confidence 679999999999999999754
No 48
>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens}
Probab=99.79 E-value=5.7e-19 Score=161.66 Aligned_cols=107 Identities=19% Similarity=0.250 Sum_probs=96.8
Q ss_pred ccccEEEEEeecCCCc-CCCCCCCeEEEEEEEEeCCCcEEEecCCCccEEEEcCCCCccchHHHhhccCCCCcEEEEEEe
Q 006908 151 DDFGVVKKVINEGQGW-ETPRAPYEVKAWISAKTGDGKLILSHREGEPYFFTFGKSEVPKGLEMGIGTMTREEKAVIYVT 229 (626)
Q Consensus 151 ~D~~v~~~i~~~G~g~-~~~~~g~~V~v~y~~~~~~g~~~~s~~~~~p~~~~~g~g~~~~gle~~l~~mk~Ge~~~~~v~ 229 (626)
.++.+.++++++|.|. ..|+.||.|+|||++++.||++|+|+ .|+.|.+|.+++|+||+++|.+|++|++++|+||
T Consensus 41 ~sG~v~~~vl~~G~G~~~~p~~gd~V~v~Y~g~l~dG~~fds~---~p~~f~lG~g~vi~G~eeaL~gMk~Ge~~~v~IP 117 (157)
T 2jwx_A 41 GNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEE---PELVFTLGDCDVIQALDLSVPLMDVGETAMVTAD 117 (157)
T ss_dssp SSSSEEEEEEECCSTTSCCCCTTEEEEEEEEEECTTSCEEEEE---EEEEEETTTTSSCHHHHHHTTTSCTTCEEEEEEC
T ss_pred CCCCEEEEEEEccCCCccCCCCCCEEEEEEEEEECCCCEeecC---CCEEEEeCCCChhHHHHHHHcCCCCCCEEEEEEC
Confidence 3444689999999992 38999999999999999999999984 8999999999999999999999999999999999
Q ss_pred CCccCCCCC-C-CCCCCcceEEEEEEEeeEEee
Q 006908 230 SQYLTPSPL-M-PVVEGCEEVHFEVELVHLIQV 260 (626)
Q Consensus 230 ~~~~~g~~~-~-~~ip~~~~l~~~v~l~~~~~~ 260 (626)
|+++||..+ . +.||++++|+|+|+|+++...
T Consensus 118 ~~~aYG~~g~~~~~IPp~stLiF~VeL~~i~~~ 150 (157)
T 2jwx_A 118 SKYCYGPQGSRSPYIPPHAALCLEVTLKTAVDL 150 (157)
T ss_dssp GGGTTTTTCCSSSCCCTTCCEEEEEEEEEEEEC
T ss_pred chhcCCcccccCCCcCCCCeEEEEEEEEEEEcc
Confidence 999999876 3 579999999999999998654
No 49
>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}
Probab=99.79 E-value=4.2e-19 Score=158.21 Aligned_cols=107 Identities=33% Similarity=0.471 Sum_probs=95.8
Q ss_pred ccccEEEE--EeecCCCcCCCCCCCeEEEEEEEEeCCCcEEEecCC-CccEEEEcCCCCccchHHHhhccCCCCcEEEEE
Q 006908 151 DDFGVVKK--VINEGQGWETPRAPYEVKAWISAKTGDGKLILSHRE-GEPYFFTFGKSEVPKGLEMGIGTMTREEKAVIY 227 (626)
Q Consensus 151 ~D~~v~~~--i~~~G~g~~~~~~g~~V~v~y~~~~~~g~~~~s~~~-~~p~~~~~g~g~~~~gle~~l~~mk~Ge~~~~~ 227 (626)
.++|+.+. ++++|.|...|+.||.|+|||++++.||++|+++.. +.|+.|.+|.+++++||+++|.+|++||+++|.
T Consensus 20 ~~~Gl~~~K~~l~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G~e~aL~gm~~Ge~~~v~ 99 (130)
T 2lgo_A 20 GSMSAQLEKKVLTPGDGVTKPQAGKKVTVHYDGRFPDGKQFDSSRSRGKPFQFTLGAGEVIKGWDQGVATMTLGEKALFT 99 (130)
T ss_dssp SSSSCCCCEEEEECCCSSCCCCTTSEEEEEEEEECTTSCEEECTTTTTCCEEEETTSTTSCHHHHHHHHHSCTTEEEEEE
T ss_pred CCCceEEEEEEEeccCCCccCCCCCEEEEEEEEEECCCCEEEccCcCCCCEEEEeCCCCccHHHHHHHhCCCCCCEEEEE
Confidence 44566666 999999954499999999999999889999998864 589999999999999999999999999999999
Q ss_pred EeCCccCCCCCC-CCCCCcceEEEEEEEeeE
Q 006908 228 VTSQYLTPSPLM-PVVEGCEEVHFEVELVHL 257 (626)
Q Consensus 228 v~~~~~~g~~~~-~~ip~~~~l~~~v~l~~~ 257 (626)
|||+++||..+. +.||++++|+|+|+|+++
T Consensus 100 ip~~~aYG~~~~~~~Ip~~~~l~f~VeL~~i 130 (130)
T 2lgo_A 100 IPYQLAYGERGYPPVIPPKATLVFEVELLAV 130 (130)
T ss_dssp ECTTTSTTTTCCSTTSCSSCCEEEEEEEEEC
T ss_pred ECcHHHCCCCCCCCCcCCCCeEEEEEEEEEC
Confidence 999999998654 569999999999999874
No 50
>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*
Probab=99.79 E-value=1.1e-18 Score=168.18 Aligned_cols=109 Identities=23% Similarity=0.333 Sum_probs=100.4
Q ss_pred cccccccEEEEEeecCCCcCCCCCCCeEEEEEEEEeCCCcEEEecC-CCccEEEEcCCCCccchHHHhhccCCCCcEEEE
Q 006908 148 IIADDFGVVKKVINEGQGWETPRAPYEVKAWISAKTGDGKLILSHR-EGEPYFFTFGKSEVPKGLEMGIGTMTREEKAVI 226 (626)
Q Consensus 148 ~v~~D~~v~~~i~~~G~g~~~~~~g~~V~v~y~~~~~~g~~~~s~~-~~~p~~~~~g~g~~~~gle~~l~~mk~Ge~~~~ 226 (626)
.++.++|+.+.++++|.| ..|..||.|+|||++++.||++|+|+. .+.|+.|.+|.+++++||++||.+|++|++++|
T Consensus 99 ~~~~~sGl~~~vl~~G~G-~~~~~gd~V~v~Y~g~l~dG~~fdss~~~~~P~~f~lG~g~vi~G~eeaL~gM~~Ge~~~v 177 (209)
T 3uf8_A 99 VVTTESGLKYEDLTEGSG-AEARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRL 177 (209)
T ss_dssp CEECTTSCEEEEEECCCS-CBCCTTCEEEEEEEEEETTSCEEEESGGGTCCEEEETTSSSSCHHHHHHHTTCBTTCEEEE
T ss_pred ccCCCCceEEEEEEcCCC-CcCCCCCEEEEEEEEEECCCCEEEEccccCCCEEEEeCCCccchhHHHHHhCCCCCCEEEE
Confidence 345678999999999999 679999999999999999999999885 578999999999999999999999999999999
Q ss_pred EEeCCccCCCCCCC-CCCCcceEEEEEEEeeE
Q 006908 227 YVTSQYLTPSPLMP-VVEGCEEVHFEVELVHL 257 (626)
Q Consensus 227 ~v~~~~~~g~~~~~-~ip~~~~l~~~v~l~~~ 257 (626)
.|||++|||..+.+ .||++++|+|+|+|+++
T Consensus 178 ~Ipp~~aYG~~g~~~~IP~~s~LvF~VeL~~I 209 (209)
T 3uf8_A 178 TIPPQLGYGARGAAGVIPPNATLVFEVELLDV 209 (209)
T ss_dssp EECGGGTTTTTCBTTTBCTTCCEEEEEEEEEC
T ss_pred EECcHHhCCCCCCCCCcCCCCeEEEEEEEEEC
Confidence 99999999987654 49999999999999874
No 51
>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A
Probab=99.79 E-value=1.1e-18 Score=153.09 Aligned_cols=106 Identities=19% Similarity=0.240 Sum_probs=96.4
Q ss_pred cccccEEEEEeecCCCc-CCCCCCCeEEEEEEEEeCCCcEEEecCCCccEEEEcCCCCccchHHHhhccCCCCcEEEEEE
Q 006908 150 ADDFGVVKKVINEGQGW-ETPRAPYEVKAWISAKTGDGKLILSHREGEPYFFTFGKSEVPKGLEMGIGTMTREEKAVIYV 228 (626)
Q Consensus 150 ~~D~~v~~~i~~~G~g~-~~~~~g~~V~v~y~~~~~~g~~~~s~~~~~p~~~~~g~g~~~~gle~~l~~mk~Ge~~~~~v 228 (626)
..++++.++++++|.|. ..|+.||.|+|||++++.+|++|+++ .|+.|.+|.+++++||+++|.+|++|++++|.|
T Consensus 10 ~~~g~~~~~vl~~G~G~~~~~~~gd~V~v~y~g~~~dG~~~ds~---~p~~f~lG~~~~i~g~e~~l~gm~~Ge~~~~~i 86 (118)
T 2awg_A 10 LGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEE---PELVFTLGDCDVIQALDLSVPLMDVGETAMVTA 86 (118)
T ss_dssp SSSSSEEEEEEECCCTTCCCCCTTSEEEEEEEEECTTSCEEEEE---EEEEEETTSSCSCHHHHHHGGGSCTTCEEEEEE
T ss_pred CCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECCCCEEECC---CCEEEEECCCChhHHHHHHHhCCCCCCEEEEEE
Confidence 34556999999999993 38999999999999998899999984 899999999999999999999999999999999
Q ss_pred eCCccCCCCCC-CCCCCcceEEEEEEEeeEE
Q 006908 229 TSQYLTPSPLM-PVVEGCEEVHFEVELVHLI 258 (626)
Q Consensus 229 ~~~~~~g~~~~-~~ip~~~~l~~~v~l~~~~ 258 (626)
||+++||..+. +.||++++|+|+|+|+++.
T Consensus 87 p~~~ayG~~~~~~~Ip~~~~l~f~v~l~~v~ 117 (118)
T 2awg_A 87 DSKYCYGPQGRSPYIPPHAALCLEVTLKTAV 117 (118)
T ss_dssp CGGGTTTTTCBTTTBCTTCCEEEEEEEEEEE
T ss_pred ChHHccCCCCCCCccCCCCeEEEEEEEEEec
Confidence 99999997654 5799999999999999873
No 52
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.78 E-value=2.6e-18 Score=152.69 Aligned_cols=115 Identities=28% Similarity=0.543 Sum_probs=107.0
Q ss_pred HHHHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 006908 395 MDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVL 474 (626)
Q Consensus 395 ~~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL 474 (626)
.+.++.++++|+.+|++|+|++|+..|++|+. +.|.+ ..+|+|+|.||+++|+|.+|+.+|.++|
T Consensus 10 P~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~----~~p~~-----------~~~~~~~~~~~~~~~~~~~A~~~~~~al 74 (126)
T 4gco_A 10 PELAQEEKNKGNEYFKKGDYPTAMRHYNEAVK----RDPEN-----------AILYSNRAACLTKLMEFQRALDDCDTCI 74 (126)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCCC-----------HHHHHHHhhHHHhhccHHHHHHHHHHHH
Confidence 35688999999999999999999999999999 67766 5689999999999999999999999999
Q ss_pred HhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q 006908 475 DANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKL 525 (626)
Q Consensus 475 ~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l 525 (626)
+++|+++.+|+++|.++..+|++++|+.+|++|++++|+| ..++..|..+
T Consensus 75 ~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~l~P~~-~~a~~~l~~~ 124 (126)
T 4gco_A 75 RLDSKFIKGYIRKAACLVAMREWSKAQRAYEDALQVDPSN-EEAREGVRNC 124 (126)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHH
T ss_pred HhhhhhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCcCC-HHHHHHHHHh
Confidence 9999999999999999999999999999999999999998 6777777655
No 53
>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A
Probab=99.78 E-value=4.2e-19 Score=158.29 Aligned_cols=107 Identities=21% Similarity=0.230 Sum_probs=98.6
Q ss_pred cccccEEEEEeecCCCcCCCCCCCeEEEEEEEEeCCCcEEEecC-CCccEEEEcCCCCccchHHHhhcc------CCCCc
Q 006908 150 ADDFGVVKKVINEGQGWETPRAPYEVKAWISAKTGDGKLILSHR-EGEPYFFTFGKSEVPKGLEMGIGT------MTREE 222 (626)
Q Consensus 150 ~~D~~v~~~i~~~G~g~~~~~~g~~V~v~y~~~~~~g~~~~s~~-~~~p~~~~~g~g~~~~gle~~l~~------mk~Ge 222 (626)
..+.++.+.++++|.| ..|+.||.|+|||++++.+|++|+++. ++.|+.|.+|.+++++||+++|.+ |++|+
T Consensus 9 ~~~~Gl~~~~l~~G~G-~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~~~~i~G~~~~L~G~~~~~~m~~Ge 87 (129)
T 1u79_A 9 VSPSGLAFCDKVVGYG-PEAVKGQLIKAHYVGKLENGKVFDSSYNRGKPLTFRIGVGEVIKGWDQGILGSDGIPPMLTGG 87 (129)
T ss_dssp ECTTSCEEEEEECCSS-CBCCTTCEEEEEEEEECTTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHHCBTTBCCCBTTC
T ss_pred ECCCCeEEEEEEcCCC-CCCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEeCCCCccHHHHHHhcccccccccCCCC
Confidence 3567899999999999 789999999999999988999999885 468999999999999999999998 99999
Q ss_pred EEEEEEeCCccCCCCCC------CCCCCcceEEEEEEEeeE
Q 006908 223 KAVIYVTSQYLTPSPLM------PVVEGCEEVHFEVELVHL 257 (626)
Q Consensus 223 ~~~~~v~~~~~~g~~~~------~~ip~~~~l~~~v~l~~~ 257 (626)
+++|.|||+++||..+. +.||++++|+|+|+|+++
T Consensus 88 ~~~v~ip~~~aYG~~~~~~~~~~~~Ip~~~~l~f~vel~~i 128 (129)
T 1u79_A 88 KRTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIEYIGK 128 (129)
T ss_dssp EEEEEECGGGTTGGGCEEEETTEEEECTTCCEEEEEEEEEE
T ss_pred EEEEEEChHHccCCCCCCccccCCcCCCCCeEEEEEEEEEe
Confidence 99999999999997654 479999999999999986
No 54
>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1
Probab=99.78 E-value=8.2e-19 Score=162.47 Aligned_cols=107 Identities=21% Similarity=0.311 Sum_probs=97.8
Q ss_pred ccccccEEEEEeecCCCcCC-CCCCCeEEEEEEEEeCCCcEEEecC-CCccEEEEcCCCCccchHHHhhccCCCCcEEEE
Q 006908 149 IADDFGVVKKVINEGQGWET-PRAPYEVKAWISAKTGDGKLILSHR-EGEPYFFTFGKSEVPKGLEMGIGTMTREEKAVI 226 (626)
Q Consensus 149 v~~D~~v~~~i~~~G~g~~~-~~~g~~V~v~y~~~~~~g~~~~s~~-~~~p~~~~~g~g~~~~gle~~l~~mk~Ge~~~~ 226 (626)
...++|+.+.++++|.| .. |..||.|+|||++++.||++|+++. ++.|+.|.+ |++|+||+++|.+|++|++++|
T Consensus 33 ~~~~sGl~~~vl~~G~G-~~~~~~gd~V~v~Y~g~l~dG~~fdss~~~g~p~~f~l--g~vI~G~eeaL~gMk~Ge~~~~ 109 (167)
T 1jvw_A 33 VKLPSGLVFQRIARGSG-KRAPAIDDKCEVHYTGRLRDGTVFDSSRERGKPTTFRP--NEVIKGWTEALQLMREGDRWRL 109 (167)
T ss_dssp EECTTSCEEEEEECCCC-SBCCCTTCCEEEEEEEECTTSCEEEEHHHHTSCEEECG--GGSCHHHHHHHTTCCTTCEEEE
T ss_pred EECCCCEEEEEEEcCCC-CcCCCCCCEEEEEEEEEECCCCEEeeccccCCCEEEEe--CchhHHHHHHHcCCCCCCEEEE
Confidence 34677999999999999 55 9999999999999999999999885 578999999 5999999999999999999999
Q ss_pred EEeCCccCCCCCC-CCCCCcceEEEEEEEeeEE
Q 006908 227 YVTSQYLTPSPLM-PVVEGCEEVHFEVELVHLI 258 (626)
Q Consensus 227 ~v~~~~~~g~~~~-~~ip~~~~l~~~v~l~~~~ 258 (626)
+|||+++||..+. +.||+|++|+|+|+|+++.
T Consensus 110 ~Ip~~laYG~~g~~~~Ipp~s~LiF~VeL~~i~ 142 (167)
T 1jvw_A 110 FIPYDLAYGVTGGGGMIPPYSPLEFDVELISIK 142 (167)
T ss_dssp EECGGGTTTTTCSSSSSCTTCCEEEEEEEEEEG
T ss_pred EECchhhCCCCCCCCCcCCCCeEEEEEEEEEEE
Confidence 9999999998754 5799999999999999985
No 55
>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.78 E-value=8.5e-19 Score=157.46 Aligned_cols=109 Identities=18% Similarity=0.225 Sum_probs=98.6
Q ss_pred cccccEEEEEeecCCCc-CCCCCCCeEEEEEEEEeCCCcEEEecCCCccEEEEcCCCCccchHHHhhccCCCCcEEEEEE
Q 006908 150 ADDFGVVKKVINEGQGW-ETPRAPYEVKAWISAKTGDGKLILSHREGEPYFFTFGKSEVPKGLEMGIGTMTREEKAVIYV 228 (626)
Q Consensus 150 ~~D~~v~~~i~~~G~g~-~~~~~g~~V~v~y~~~~~~g~~~~s~~~~~p~~~~~g~g~~~~gle~~l~~mk~Ge~~~~~v 228 (626)
..++++.++++++|.|. ..|+.||.|+|||++++.+|++|++ +.|+.|.+|.+++++||+++|.+|++|++++|.|
T Consensus 14 ~~~g~l~~~vl~~G~G~~~~~~~gd~V~v~Y~g~~~dG~~fds---~~p~~f~lG~g~~i~G~e~~L~gm~~Ge~~~v~i 90 (135)
T 2d9f_A 14 LGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQE---EPELVFTLGDCDVIQALDLSVPLMDVGETAMVTA 90 (135)
T ss_dssp SSSSSSEEEEEECCCSSCCCCCTTSEEEEEEEEEESSSCEEEE---EEEEEEETTSCCSCTTTTTTGGGSCTTCEEEEEE
T ss_pred CCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECCCCEEec---CCCEEEEeCCCChhHHHHHHHhCCCCCCEEEEEE
Confidence 34556999999999993 4899999999999999999999997 3899999999999999999999999999999999
Q ss_pred eCCccCCCCC--CCCCCCcceEEEEEEEeeEEeee
Q 006908 229 TSQYLTPSPL--MPVVEGCEEVHFEVELVHLIQVR 261 (626)
Q Consensus 229 ~~~~~~g~~~--~~~ip~~~~l~~~v~l~~~~~~~ 261 (626)
||+++||..+ .+.||++++|+|+|+|+++....
T Consensus 91 p~~~aYG~~~~~~~~Ip~~~~l~f~vel~~v~~~~ 125 (135)
T 2d9f_A 91 DSKYCYGPQGSRSPYIPPHAALCLEVTLKTAVDRP 125 (135)
T ss_dssp CHHHHTCTTCCSSSCCCTTCCEEEEEEEEEEESSC
T ss_pred ChhHccCcCCcCCCccCCCCeEEEEEEEEEeecCC
Confidence 9999999765 35799999999999999997644
No 56
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.77 E-value=7.5e-19 Score=160.74 Aligned_cols=139 Identities=17% Similarity=0.219 Sum_probs=116.8
Q ss_pred hHHHHHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHH
Q 006908 393 GIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNK 472 (626)
Q Consensus 393 e~~~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~ 472 (626)
.....+..+++.|+.+|+.|+|++|+..|++||.+.+.. |..+ ..........+|+|+|.|+.++|+|++|+.+|++
T Consensus 6 ~~~~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~-~~~~--a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~k 82 (159)
T 2hr2_A 6 KEVVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTM-PPEE--AFDHAGFDAFCHAGLAEALAGLRSFDEALHSADK 82 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTS-CTTS--CCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCC-cchh--hhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 346789999999999999999999999999999954431 1110 0001223345999999999999999999999999
Q ss_pred HHHh-------CCCCHHHH----HHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 006908 473 VLDA-------NPAHVKGL----YRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQEVESK 535 (626)
Q Consensus 473 aL~~-------dp~~~ka~----~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~~~~~~~~~ 535 (626)
||++ +|+++++| ||+|.++..+|++++|+.+|++|++++|++ ..+...+..+++.+++..++
T Consensus 83 AL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d-~~~~~~~~~~~~~~~~~~~k 155 (159)
T 2hr2_A 83 ALHYFNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEER-KGETPGKERMMEVAIDRIAQ 155 (159)
T ss_dssp HHHHHHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHC-CSCCTTHHHHHHHHHHHHHH
T ss_pred HHHhhhccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCc-HHHHHHHHHHHHHHHHHHHH
Confidence 9999 99999999 999999999999999999999999999987 57888888888877766543
No 57
>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A*
Probab=99.77 E-value=2.3e-18 Score=165.61 Aligned_cols=107 Identities=24% Similarity=0.292 Sum_probs=98.6
Q ss_pred ccccccEEEEEeecCCCcCCCCCCCeEEEEEEEEeCCCcEEEecC-CCccEEEEcCCCCccchHHHhhccCCCCcEEEEE
Q 006908 149 IADDFGVVKKVINEGQGWETPRAPYEVKAWISAKTGDGKLILSHR-EGEPYFFTFGKSEVPKGLEMGIGTMTREEKAVIY 227 (626)
Q Consensus 149 v~~D~~v~~~i~~~G~g~~~~~~g~~V~v~y~~~~~~g~~~~s~~-~~~p~~~~~g~g~~~~gle~~l~~mk~Ge~~~~~ 227 (626)
...++|+.+.++++|.| ..|+.||.|+|||++++.||++|+++. ++.|+.|.+ +++||||+++|.+|++|++++|+
T Consensus 102 ~~~~sGl~y~vl~~G~G-~~p~~gD~V~V~Y~g~l~dG~vfdss~~~g~p~~f~l--g~vI~G~eeaL~gMk~Gek~~v~ 178 (213)
T 1fd9_A 102 VVLPSGLQYKVINSGNG-VKPGKSDTVTVEYTGRLIDGTVFDSTEKTGKPATFQV--SQVIPGWTEALQLMPAGSTWEIY 178 (213)
T ss_dssp EECTTSCEEEEEECCCS-CCCCTTCEEEEEEEEEETTSCEEEEHHHHCSCEEEEG--GGSCHHHHHHHTTCCTTCEEEEE
T ss_pred EECCCccEEEEEecCCC-ccCCCCCEEEEEEEEEECCCCEEeeccccCCCEEEEc--CchhhHHHHHHcCCCCCCEEEEE
Confidence 34667999999999999 899999999999999999999999885 479999999 58999999999999999999999
Q ss_pred EeCCccCCCCCC-CCCCCcceEEEEEEEeeEE
Q 006908 228 VTSQYLTPSPLM-PVVEGCEEVHFEVELVHLI 258 (626)
Q Consensus 228 v~~~~~~g~~~~-~~ip~~~~l~~~v~l~~~~ 258 (626)
|||+++||..+. +.||++++|+|+|+|+++.
T Consensus 179 IP~~laYG~~g~~~~Ipp~stLiF~VeLl~v~ 210 (213)
T 1fd9_A 179 VPSGLAYGPRSVGGPIGPNETLIFKIHLISVK 210 (213)
T ss_dssp ECGGGTTTTCCCSSSCCTTCCEEEEEEEEEEE
T ss_pred ECchhccCccCCCCCCCCCCeEEEEEEEEEEE
Confidence 999999998764 5799999999999999985
No 58
>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A
Probab=99.76 E-value=3.3e-18 Score=165.64 Aligned_cols=104 Identities=23% Similarity=0.363 Sum_probs=97.0
Q ss_pred ccccEEEEEeecCCCcCCCCCCCeEEEEEEEEeCCCcEEEecC-CCccEEEEcCCCCccchHHHhhccCCCCcEEEEEEe
Q 006908 151 DDFGVVKKVINEGQGWETPRAPYEVKAWISAKTGDGKLILSHR-EGEPYFFTFGKSEVPKGLEMGIGTMTREEKAVIYVT 229 (626)
Q Consensus 151 ~D~~v~~~i~~~G~g~~~~~~g~~V~v~y~~~~~~g~~~~s~~-~~~p~~~~~g~g~~~~gle~~l~~mk~Ge~~~~~v~ 229 (626)
.++++.+.++++|.| ..|..||.|+|||++++.||++|+|+. ++.|+.|.+ |++||||+++|.+|++|++++|+||
T Consensus 119 ~~sGl~y~vl~~G~G-~~p~~gD~V~V~Y~g~l~dG~vfdss~~~g~p~~f~l--g~vI~G~eeaL~gMk~Gek~~v~IP 195 (224)
T 1q6h_A 119 SSTGLVYQVVEAGKG-EAPKDSDTVVVNYKGTLIDGKEFDNSYTRGEPLSFRL--DGVIPGWTEGLKNIKKGGKIKLVIP 195 (224)
T ss_dssp CTTSCEEEEEECCSS-CCCCTTCEEEEEEEEEETTSCEEEEGGGGTSCEEEEG--GGSCHHHHHHGGGSCTTCEEEEEEC
T ss_pred CCCceEEEEEecccC-ccccCCCEEEEEEEEEeCCCCEEeeccccCCCEEEEc--CCcchhHHHHHcCCCCCCEEEEEEC
Confidence 467999999999999 789999999999999999999999885 578999999 5999999999999999999999999
Q ss_pred CCccCCCCCCCCCCCcceEEEEEEEeeE
Q 006908 230 SQYLTPSPLMPVVEGCEEVHFEVELVHL 257 (626)
Q Consensus 230 ~~~~~g~~~~~~ip~~~~l~~~v~l~~~ 257 (626)
|+++||..+.+.||++++|+|+|+|+++
T Consensus 196 ~~laYG~~g~~~IPp~stLiF~VeL~~i 223 (224)
T 1q6h_A 196 PELAYGKAGVPGIPPNSTLVFDVELLDV 223 (224)
T ss_dssp GGGTTTTTCBTTBCTTCCEEEEEEEEEE
T ss_pred chhhcCcCCCCCCCCCCEEEEEEEEEEe
Confidence 9999998776669999999999999986
No 59
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.75 E-value=3.2e-17 Score=173.40 Aligned_cols=156 Identities=26% Similarity=0.480 Sum_probs=132.7
Q ss_pred CChhhHHHHHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCC-CCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHH
Q 006908 389 LSFDGIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVN-PQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSI 467 (626)
Q Consensus 389 ~~~~e~~~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~-p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~ 467 (626)
.++++.+..+..++..|+.+++.|+|++|+..|++|+.++.... ..+.++..........+|+|+|.||+++++|.+|+
T Consensus 214 ~~~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~ 293 (370)
T 1ihg_A 214 KDVDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAV 293 (370)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHH
Confidence 36888999999999999999999999999999999998544310 01112222345566789999999999999999999
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Q 006908 468 EACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQEVESKARKQFKGLFD 545 (626)
Q Consensus 468 ~~~~~aL~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 545 (626)
.+|.+||+++|+++++|+++|.+|..+|+|++|+.+|++|++++|++ ..++..|..+...+.+..++++..+++||+
T Consensus 294 ~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~-~~~~~~l~~~~~~~~~~~~a~k~~~~kmf~ 370 (370)
T 1ihg_A 294 DSCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPED-KAIQAELLKVKQKIKAQKDKEKAAYAKMFA 370 (370)
T ss_dssp HHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHHHHHHHHHHCCC-----
T ss_pred HHHHHHHHhCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999998 789999999999999999999998898884
No 60
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.75 E-value=5e-17 Score=155.57 Aligned_cols=170 Identities=25% Similarity=0.311 Sum_probs=131.8
Q ss_pred eeeecccccCCCCCCCChhhHHHHHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChh-----HHHHHhhhhhH
Q 006908 374 EIELLGFEKPKDWTGLSFDGIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDE-----EGKVFVGKRNL 448 (626)
Q Consensus 374 ~vel~~~~~~~~~~~~~~~e~~~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~e-----e~~~~~~~~~~ 448 (626)
...+..++.....|.++.++....+..++..|+.++..|+|.+|+..|.+++.. .|.+.+ .......+...
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~----~~~~~~~~~~~~~~~~~~~~~~ 89 (198)
T 2fbn_A 14 RENLYFQGAKKSIYDYTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDF----FIHTEEWDDQILLDKKKNIEIS 89 (198)
T ss_dssp --------CCCSGGGCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT----TTTCTTCCCHHHHHHHHHHHHH
T ss_pred hhhhhhccccCchhhCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH----HhcccccchhhHHHHHHHHHHH
Confidence 344556777777888999999999999999999999999999999999999994 333321 11112334457
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q 006908 449 LHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQ 528 (626)
Q Consensus 449 ~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~~ 528 (626)
+++|+|.|++++++|.+|+.+|.+++.++|.++++++++|.++..+|++++|+..|++|++++|++ ..+...+..+...
T Consensus 90 ~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~-~~~~~~l~~~~~~ 168 (198)
T 2fbn_A 90 CNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNN-LDIRNSYELCVNK 168 (198)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTC-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCc-HHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999998 7899999999999
Q ss_pred HHHHHHHHHHHHHccccCCC
Q 006908 529 RQEVESKARKQFKGLFDKKP 548 (626)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~~~ 548 (626)
+.+..+.++..++++|....
T Consensus 169 ~~~~~~~~~~~~~~~f~~~~ 188 (198)
T 2fbn_A 169 LKEARKKDKLTFGGMFDKGP 188 (198)
T ss_dssp HHHHHC--------------
T ss_pred HHHHHHHHHHHHHHHhcccc
Confidence 99888888899999998654
No 61
>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.74 E-value=9.8e-18 Score=143.16 Aligned_cols=93 Identities=25% Similarity=0.350 Sum_probs=85.8
Q ss_pred CCCCCCCeEEEEEEEEeCCCcEEEecC-CCccEEEEcCCCCccchHHHhhccCCCCcEEEEEEeCCccCCCCCC-CCCCC
Q 006908 167 ETPRAPYEVKAWISAKTGDGKLILSHR-EGEPYFFTFGKSEVPKGLEMGIGTMTREEKAVIYVTSQYLTPSPLM-PVVEG 244 (626)
Q Consensus 167 ~~~~~g~~V~v~y~~~~~~g~~~~s~~-~~~p~~~~~g~g~~~~gle~~l~~mk~Ge~~~~~v~~~~~~g~~~~-~~ip~ 244 (626)
..++.||.|+|||++++.+|++|+++. ++.|+.|.+|.+++++||+++|.+|++|++++|.|||+++||..+. +.||+
T Consensus 4 ~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~v~ip~~~ayG~~~~~~~Ip~ 83 (102)
T 2pbc_A 4 IKSRKGDVLHMHYTGKLEDGTEFDSSLPQNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPKIPG 83 (102)
T ss_dssp CCCCTTCEEEEEEEEECTTSCEEEESTTTTCCEEEETTSSSSCHHHHTTSTTCCTTCEEEEEECGGGTTTTTCBTTTBCT
T ss_pred CcCCCCCEEEEEEEEEECCCCEEEeCCCCCCCEEEEeCCCCccHHHHHHHhCCCCCCEEEEEECHHHCcCCCCCCCCcCc
Confidence 678999999999999988999999886 4699999999999999999999999999999999999999997654 46999
Q ss_pred cceEEEEEEEeeEEe
Q 006908 245 CEEVHFEVELVHLIQ 259 (626)
Q Consensus 245 ~~~l~~~v~l~~~~~ 259 (626)
+++++|+|+|+++.+
T Consensus 84 ~~~l~f~v~l~~v~~ 98 (102)
T 2pbc_A 84 GATLVFEVELLKIER 98 (102)
T ss_dssp TCCEEEEEEEEEEGG
T ss_pred CCeEEEEEEEEEecc
Confidence 999999999999854
No 62
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.68 E-value=2.3e-16 Score=140.14 Aligned_cols=115 Identities=21% Similarity=0.354 Sum_probs=102.3
Q ss_pred HHHHHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 006908 394 IMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKV 473 (626)
Q Consensus 394 ~~~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~a 473 (626)
..+.|..+++.|+.+|++|+|++|+.+|++|+. +.|.+ ..+|+|+|.||+++|+|.+|+.+|.++
T Consensus 4 ~~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~----~~p~~-----------~~~~~nlg~~~~~~~~~~~A~~~~~~a 68 (127)
T 4gcn_A 4 MTDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIE----LDPSN-----------ITFYNNKAAVYFEEKKFAECVQFCEKA 68 (127)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCCC-----------HHHHHhHHHHHHHhhhHHHHHHHHHHH
Confidence 456788999999999999999999999999999 67766 568999999999999999999999999
Q ss_pred HHhCCCC-------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q 006908 474 LDANPAH-------VKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKL 525 (626)
Q Consensus 474 L~~dp~~-------~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l 525 (626)
|+++|++ +++|+++|.++..+++|++|+.+|++||+++|+ +++...|..+
T Consensus 69 l~~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~--~~~~~~l~~l 125 (127)
T 4gcn_A 69 VEVGRETRADYKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSEFRD--PELVKKVKEL 125 (127)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCC--HHHHHHHHHH
T ss_pred HHhCcccchhhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcC--HHHHHHHHHh
Confidence 9999866 479999999999999999999999999999986 4455555444
No 63
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.64 E-value=1.8e-15 Score=133.33 Aligned_cols=116 Identities=26% Similarity=0.405 Sum_probs=106.6
Q ss_pred HHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 006908 397 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA 476 (626)
Q Consensus 397 ~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~ 476 (626)
.+..+...|+.+++.|+|++|+..|++++. +.|.+ ..+|+|+|.|++++++|.+|+.+|.+++++
T Consensus 3 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~----~~p~~-----------~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 67 (126)
T 3upv_A 3 KAEEARLEGKEYFTKSDWPNAVKAYTEMIK----RAPED-----------ARGYSNRAAALAKLMSFPEAIADCNKAIEK 67 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHH----hCCCC-----------hHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 578899999999999999999999999999 56665 468999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC------CCCHHHHHHHHHHHHHH
Q 006908 477 NPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVD------KSSEPDATAALSKLKKQ 528 (626)
Q Consensus 477 dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~------P~~~~~~~~~l~~l~~~ 528 (626)
+|+++.+|+++|.++..+|++++|+..|+++++++ |.+ ..+...+..+..+
T Consensus 68 ~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~p~~-~~~~~~l~~~~~~ 124 (126)
T 3upv_A 68 DPNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSA-REIDQLYYKASQQ 124 (126)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTH-HHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhCcccCCchhH-HHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999 876 6777777777654
No 64
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=99.60 E-value=1.5e-14 Score=133.30 Aligned_cols=84 Identities=25% Similarity=0.398 Sum_probs=75.6
Q ss_pred CCCCCCEEEEEEEEEEcCCcEEEeeccCCCCCCcceEEEeCCCccchhHHhhcCCCCCCcEEEEEeeccccccCCCCCCC
Q 006908 44 TPSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTMLKGEVSMFKMKPQMHYGEDDCPVA 123 (626)
Q Consensus 44 ~p~~gd~V~v~y~~~~~dG~~~~st~~~~~~~~~p~~~~lg~~~~~~gle~~l~~m~~Ge~~~~~ip~~~~~g~~~~~~~ 123 (626)
.++.||.|+|||++++.||++|+||+. .+.|+.|.+|.+++++||+++|.+|++|++++|.|||++|||..
T Consensus 24 ~i~~gd~V~v~Y~g~l~dG~vfDss~~----~~~P~~f~lG~g~vipG~eeaL~gm~~Ge~~~v~Ipp~~AYG~~----- 94 (169)
T 4dt4_A 24 SVQSNSAVLVHFTLKLDDGTTAESTRN----NGKPALFRLGDASLSEGLEQHLLGLKVGDKTTFSLEPDAAFGVP----- 94 (169)
T ss_dssp SCCTTCEEEEEEEEEETTSCEEEEHHH----HTSCEEEETTSSSSCHHHHHHHTTCCTTCEEEEEECGGGTTCCC-----
T ss_pred cCCCCCEEEEEEEEEECCCCEEEecCC----CCCCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEChHHhcCCC-----
Confidence 378999999999999999999999986 55799999999999999999999999999999999999999976
Q ss_pred CCCCCCCCceEEEEEEeeee
Q 006908 124 APSTFPKDEELHFEIEMIDF 143 (626)
Q Consensus 124 ~~~~i~~~~~lv~~v~l~~~ 143 (626)
+..+++.|....+
T Consensus 95 -------~~~lv~~vp~~~f 107 (169)
T 4dt4_A 95 -------SPDLIQYFSRREF 107 (169)
T ss_dssp -------CGGGEEEEEGGGG
T ss_pred -------ChHHEEEeCHHHC
Confidence 4667777766665
No 65
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.59 E-value=1.5e-14 Score=132.73 Aligned_cols=105 Identities=11% Similarity=0.145 Sum_probs=98.8
Q ss_pred HHHHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 006908 395 MDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVL 474 (626)
Q Consensus 395 ~~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL 474 (626)
...+..+...|..+++.|+|++|+..|++++. +.|.+ ..+|+|+|.|+.++|+|++|+.+|.+++
T Consensus 33 p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~----~~P~~-----------~~~~~~lg~~~~~~g~~~~Ai~~~~~al 97 (151)
T 3gyz_A 33 DDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCI----YDFYN-----------VDYIMGLAAIYQIKEQFQQAADLYAVAF 97 (151)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCCC-----------HHHHHHHHHHHHHHccHHHHHHHHHHHH
Confidence 34577889999999999999999999999999 67776 4589999999999999999999999999
Q ss_pred HhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC
Q 006908 475 DANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSS 514 (626)
Q Consensus 475 ~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~ 514 (626)
+++|+++.+|+++|.||..+|++++|+..|++|++++|+.
T Consensus 98 ~l~P~~~~~~~~lg~~~~~lg~~~eA~~~~~~al~l~~~~ 137 (151)
T 3gyz_A 98 ALGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDE 137 (151)
T ss_dssp HHSSSCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCH
T ss_pred hhCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCH
Confidence 9999999999999999999999999999999999999985
No 66
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=99.59 E-value=8.5e-15 Score=133.69 Aligned_cols=86 Identities=26% Similarity=0.334 Sum_probs=72.4
Q ss_pred CCCCCEEEEEEEEEEcCCcEEEeeccC-------C--CCCCcceEEEeCCCccchhHHhhcCCCCCCcEEEEEeeccccc
Q 006908 45 PSDGDQVAYHCTVRTLDGVIVESTRSE-------Y--GGKGIPIRHVLGKSKILLGLLEGIPTMLKGEVSMFKMKPQMHY 115 (626)
Q Consensus 45 p~~gd~V~v~y~~~~~dG~~~~st~~~-------~--~~~~~p~~~~lg~~~~~~gle~~l~~m~~Ge~~~~~ip~~~~~ 115 (626)
++.||.|+|||++++ ||++|+||+.. + +..+.|+.|.+|.+++++||+++|.+|++|++++|+|||++||
T Consensus 2 i~~Gd~V~v~Y~g~l-dG~vfDss~~~~a~~~g~~~~~~~~~P~~f~vG~g~vi~G~eeaL~gm~~Ge~~~v~Ipp~~aY 80 (157)
T 3pr9_A 2 VEKGKMVKISYDGYV-DGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEKAF 80 (157)
T ss_dssp CCTTCEEEEEEEEEE-TTEEEEESCHHHHHHHTCCCTTSCCSCEEEETTSSSSCHHHHHHHHHCCTTCEEEEEECGGGTT
T ss_pred CCCCCEEEEEEEEEE-CCEEEEeccccccccccccccccCCCCEEEEECCCcHHHHHHHHHcCCCCCCEEEEEECcHHhc
Confidence 678999999999999 99999999751 0 1113799999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCceEEEEEEeeee
Q 006908 116 GEDDCPVAAPSTFPKDEELHFEIEMIDF 143 (626)
Q Consensus 116 g~~~~~~~~~~~i~~~~~lv~~v~l~~~ 143 (626)
|..+ ..++..+....+
T Consensus 81 G~~~------------~~~V~~v~~~~f 96 (157)
T 3pr9_A 81 GKRD------------PSKIKLIPLSEF 96 (157)
T ss_dssp CCCC------------GGGEEEEEHHHH
T ss_pred CCCC------------hHhEEEcCHHHC
Confidence 9763 556666655554
No 67
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.59 E-value=1.6e-14 Score=133.65 Aligned_cols=120 Identities=19% Similarity=0.322 Sum_probs=105.6
Q ss_pred HHHHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 006908 395 MDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVL 474 (626)
Q Consensus 395 ~~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL 474 (626)
...+..+...|+.+++.|+|++|+..|++++. +.|.+ ..+|+|+|.||+++++|.+|+.+|.+++
T Consensus 8 ~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~----~~p~~-----------~~~~~~l~~~~~~~g~~~~A~~~~~~al 72 (164)
T 3sz7_A 8 TPESDKLKSEGNAAMARKEYSKAIDLYTQALS----IAPAN-----------PIYLSNRAAAYSASGQHEKAAEDAELAT 72 (164)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HSTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCcC-----------HHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 35688899999999999999999999999999 56655 4689999999999999999999999999
Q ss_pred HhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHH--HHHHHHHHHHHHH
Q 006908 475 DANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPD--ATAALSKLKKQRQ 530 (626)
Q Consensus 475 ~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~--~~~~l~~l~~~~~ 530 (626)
.++|+++.+|+++|.+|..+|++++|+.+|+++++++|++ .. +...+..++.++.
T Consensus 73 ~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~~~l~~~~~~~~ 129 (164)
T 3sz7_A 73 VVDPKYSKAWSRLGLARFDMADYKGAKEAYEKGIEAEGNG-GSDAMKRGLETTKRKIE 129 (164)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSSS-CCHHHHHHHHHHHHHHH
T ss_pred HhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCc-hHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999987 33 4444444444443
No 68
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=99.58 E-value=5.5e-14 Score=128.09 Aligned_cols=83 Identities=20% Similarity=0.314 Sum_probs=73.8
Q ss_pred CCCCCCEEEEEEEEEEc-CCcEEEeeccCCCCCCcceEEEeCCCccchhHHhhcCCCCCCcEEEEEeeccccccCCCCCC
Q 006908 44 TPSDGDQVAYHCTVRTL-DGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTMLKGEVSMFKMKPQMHYGEDDCPV 122 (626)
Q Consensus 44 ~p~~gd~V~v~y~~~~~-dG~~~~st~~~~~~~~~p~~~~lg~~~~~~gle~~l~~m~~Ge~~~~~ip~~~~~g~~~~~~ 122 (626)
.++.||.|++||++++. +|++|+||+. +.|+.|.+|.++++|||+++|.+|++|++++|.|||+.+||..
T Consensus 6 ~i~~gd~V~v~Y~g~~~~dG~~fdss~~-----~~p~~f~~G~g~vipg~e~aL~gm~~Ge~~~v~ipp~~aYG~~---- 76 (151)
T 2kr7_A 6 LESIKQAALIEYEVREQGSSIVLDSNIS-----KEPLEFIIGTNQIIAGLEKAVLKAQIGEWEEVVIAPEEAYGVY---- 76 (151)
T ss_dssp CTTSCCEEEEEEEEEESSCSCEEEESTT-----TCCEEEETTCCCSCHHHHHHHTTCCBTCEEEEEECGGGTTCSS----
T ss_pred CCCCCCEEEEEEEEEECCCCCEEEeCCC-----CcCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEecHHHcCCC----
Confidence 37899999999999987 9999999984 4799999999999999999999999999999999999999976
Q ss_pred CCCCCCCCCceEEEEEEeeee
Q 006908 123 AAPSTFPKDEELHFEIEMIDF 143 (626)
Q Consensus 123 ~~~~~i~~~~~lv~~v~l~~~ 143 (626)
+..+++.|....+
T Consensus 77 --------~~~~v~~v~~~~f 89 (151)
T 2kr7_A 77 --------ESSYLQEVPRDQF 89 (151)
T ss_dssp --------CSCEEEEEEGGGG
T ss_pred --------CcceEEEEcHHHc
Confidence 3556777766555
No 69
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=99.54 E-value=2.4e-14 Score=135.40 Aligned_cols=82 Identities=23% Similarity=0.302 Sum_probs=72.3
Q ss_pred CCCCCEEEEEEEEEEcCCcEEEeeccCCCCCCcceEEEeCCCccchhHHhhcCCCCCCcEEEEEeeccccccCCCCCCCC
Q 006908 45 PSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTMLKGEVSMFKMKPQMHYGEDDCPVAA 124 (626)
Q Consensus 45 p~~gd~V~v~y~~~~~dG~~~~st~~~~~~~~~p~~~~lg~~~~~~gle~~l~~m~~Ge~~~~~ip~~~~~g~~~~~~~~ 124 (626)
++.||.|+|+|++++.+|++|+||+. ..|+.|.+|.++++|||+++|.+|++|++++|+|||+.+||..+
T Consensus 3 i~~gd~V~v~Y~g~~~dG~~fdss~~-----~~P~~f~lG~g~vipG~eeaL~Gm~vGe~~~v~Ippe~aYGe~~----- 72 (196)
T 2kfw_A 3 VAKDLVVSLAYQVRTEDGVLVDESPV-----SAPLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYD----- 72 (196)
T ss_dssp CCSSCEEEEEEEEEETTTEEEEECCT-----TSCCEEESSSSSSCHHHHHHHSSSCTTCEEEEECSTTTTSSCCC-----
T ss_pred CCCCCEEEEEEEEEECCCCEEEecCC-----CCCEEEEECCCCcchHHHHHHcCCCCCCEEEEEeCcHHhcCCCC-----
Confidence 67899999999999889999999984 47999999999999999999999999999999999999999763
Q ss_pred CCCCCCCceEEEEEEeeee
Q 006908 125 PSTFPKDEELHFEIEMIDF 143 (626)
Q Consensus 125 ~~~i~~~~~lv~~v~l~~~ 143 (626)
..+++.|.+..+
T Consensus 73 -------~~lV~~vp~~~f 84 (196)
T 2kfw_A 73 -------ENLVQRVPKDVF 84 (196)
T ss_dssp -------TTTCEEECGGGC
T ss_pred -------hhhEEEEEHHHC
Confidence 445666655554
No 70
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.53 E-value=9.8e-14 Score=125.21 Aligned_cols=120 Identities=15% Similarity=0.246 Sum_probs=104.9
Q ss_pred HHHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 006908 396 DEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLD 475 (626)
Q Consensus 396 ~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~ 475 (626)
..+..+...|..+++.|+|++|+..|++++. ..|.+ ..+|+++|.|+.++|+|.+|+.+|.+++.
T Consensus 16 ~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~----~~p~~-----------~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 80 (142)
T 2xcb_A 16 DTLEQLYALGFNQYQAGKWDDAQKIFQALCM----LDHYD-----------ARYFLGLGACRQSLGLYEQALQSYSYGAL 80 (142)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccHHHHHHHHHHHHH----hCCcc-----------HHHHHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 3566778899999999999999999999999 67766 45899999999999999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 006908 476 ANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQE 531 (626)
Q Consensus 476 ~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~~~~~ 531 (626)
++|+++.+++++|.++..+|++++|+..|+++++++|++ +........+...+..
T Consensus 81 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~~~~~~~~l~~ 135 (142)
T 2xcb_A 81 MDINEPRFPFHAAECHLQLGDLDGAESGFYSARALAAAQ-PAHEALAARAGAMLEA 135 (142)
T ss_dssp HCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTC-GGGHHHHHHHHHHHHH
T ss_pred cCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-cchHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999986 4445555555444443
No 71
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.53 E-value=7.3e-14 Score=127.43 Aligned_cols=117 Identities=14% Similarity=0.226 Sum_probs=102.4
Q ss_pred HHHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 006908 396 DEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLD 475 (626)
Q Consensus 396 ~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~ 475 (626)
..+..+...|..++..|+|++|+..|++++. ..|.+ ..+|+++|.|+..+|+|++|+.+|.+++.
T Consensus 19 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~----~~p~~-----------~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 83 (148)
T 2vgx_A 19 DTLEQLYSLAFNQYQSGXYEDAHXVFQALCV----LDHYD-----------SRFFLGLGACRQAMGQYDLAIHSYSYGAV 83 (148)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCChHHHHHHHHHHHH----cCccc-----------HHHHHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 3566788899999999999999999999999 67766 45889999999999999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q 006908 476 ANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQ 528 (626)
Q Consensus 476 ~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~~ 528 (626)
++|+++.+++++|.++..+|++++|+..|++|++++|++ +........+...
T Consensus 84 l~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~~~~~~~~ 135 (148)
T 2vgx_A 84 MDIXEPRFPFHAAECLLQXGELAEAESGLFLAQELIANX-PEFXELSTRVSSM 135 (148)
T ss_dssp HSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTC-GGGHHHHHHHHHH
T ss_pred cCCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCC-CcchHHHHHHHHH
Confidence 999999999999999999999999999999999999986 3443344444333
No 72
>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1
Probab=99.53 E-value=6.4e-15 Score=127.41 Aligned_cols=84 Identities=14% Similarity=0.222 Sum_probs=74.5
Q ss_pred CCCCCCEEEEEEEEEEcCCcEEEeeccCCCCCCcceEEEeCCCccchhHHhhcCCCCCCcEEEEEeeccccccCCCCCCC
Q 006908 44 TPSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTMLKGEVSMFKMKPQMHYGEDDCPVA 123 (626)
Q Consensus 44 ~p~~gd~V~v~y~~~~~dG~~~~st~~~~~~~~~p~~~~lg~~~~~~gle~~l~~m~~Ge~~~~~ip~~~~~g~~~~~~~ 123 (626)
.++.||.|+|+|++++ ||++|++++ +.|+.|.+|.++++|||+++|.+|++|++++|.||+...||..+.
T Consensus 29 ~~~~gD~V~v~Y~g~~-dG~~fdss~------~~p~~f~lG~g~vi~G~ee~L~Gmk~Ge~~~v~i~fP~~Yg~~~~--- 98 (113)
T 1hxv_A 29 KLANGDIAIIDFTGIV-DNKKLASAS------AQNYELTIGSNSFIKGFETGLIAMKVNQKKTLALTFPSDYHVKEL--- 98 (113)
T ss_dssp CCCSSEEEEEEEEEEE-TTEECSTTC------CSEEEEEETSSCSCTTHHHHHHTSCSSEEEEECCCCCTTSSSSGG---
T ss_pred CCCCCCEEEEEEEEEE-CCEEcccCC------ccCEEEEECCCChhHHHHHHHCCCCCCCEEEEEEeCchhhCcCCC---
Confidence 3899999999999998 999999885 469999999999999999999999999999999973334987654
Q ss_pred CCCCCCCCceEEEEEEeeee
Q 006908 124 APSTFPKDEELHFEIEMIDF 143 (626)
Q Consensus 124 ~~~~i~~~~~lv~~v~l~~~ 143 (626)
++++++|+|+|+++
T Consensus 99 ------~g~~l~F~V~l~~V 112 (113)
T 1hxv_A 99 ------QSKPVTFEVVLKAI 112 (113)
T ss_dssp ------GSCCCEEEEEECCB
T ss_pred ------CCCEEEEEEEEEEE
Confidence 47999999999887
No 73
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=99.53 E-value=7.8e-14 Score=129.30 Aligned_cols=69 Identities=17% Similarity=0.135 Sum_probs=65.7
Q ss_pred CCCCCeEEEEEEEEeCCCcEEEecCCCccEEEEcCCCCccchHHHhhccCCCCcEEEEEEeCCccCCCC
Q 006908 169 PRAPYEVKAWISAKTGDGKLILSHREGEPYFFTFGKSEVPKGLEMGIGTMTREEKAVIYVTSQYLTPSP 237 (626)
Q Consensus 169 ~~~g~~V~v~y~~~~~~g~~~~s~~~~~p~~~~~g~g~~~~gle~~l~~mk~Ge~~~~~v~~~~~~g~~ 237 (626)
++.||.|+|+|++++.+|++|+|+..+.|+.|.+|.++++|||+++|.+|++|++++|.|||+.+||..
T Consensus 3 i~~gd~V~v~Y~g~~~dG~~fdss~~~~P~~f~lG~g~vipG~eeaL~Gm~~Ge~~~v~ippe~aYG~~ 71 (171)
T 2k8i_A 3 VAKDLVVSLAYQVRTEDGVLVDESPVSAPLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQY 71 (171)
T ss_dssp CCTTEEEEEEEEEEETTSCEEEECCSSSCEEEETTSCSSCSHHHHHHTTCCTTCEEEEEEETTTSSCCC
T ss_pred CCCCCEEEEEEEEEECCCCEEeeccCCcCEEEEECCCCcchHHHHHHcCCCCCCEEEEEECcHHhcCCC
Confidence 678999999999998899999999877999999999999999999999999999999999999999965
No 74
>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A
Probab=99.53 E-value=2.4e-14 Score=138.39 Aligned_cols=86 Identities=26% Similarity=0.334 Sum_probs=72.6
Q ss_pred CCCCCEEEEEEEEEEcCCcEEEeeccC-------C--CCCCcceEEEeCCCccchhHHhhcCCCCCCcEEEEEeeccccc
Q 006908 45 PSDGDQVAYHCTVRTLDGVIVESTRSE-------Y--GGKGIPIRHVLGKSKILLGLLEGIPTMLKGEVSMFKMKPQMHY 115 (626)
Q Consensus 45 p~~gd~V~v~y~~~~~dG~~~~st~~~-------~--~~~~~p~~~~lg~~~~~~gle~~l~~m~~Ge~~~~~ip~~~~~ 115 (626)
++.||.|+|||++++ ||++|+||+.. + +..+.|+.|.+|.++++|||+++|.+|++|++++|.|||++||
T Consensus 2 i~~Gd~V~v~Y~g~l-dG~vfDss~~~~A~e~gi~~~~~~~~P~~f~lG~g~vIpG~eeaL~Gm~vGek~~v~Ippe~AY 80 (231)
T 3prb_A 2 VEKGKMVKISYDGYV-DGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEKAF 80 (231)
T ss_dssp CCTTCEEEEEEEEEE-TTEEEEESCHHHHHHTTCCCTTSCCSCEEEETTSSSSCHHHHHHHHTCCTTCEEEEEECGGGTT
T ss_pred CCCCCEEEEEEEEEE-CCEEEEeccchhcccccccccccCCCCEEEEeCCCcHHHHHHHHHcCCCCCCEEEEEeCcHHhc
Confidence 578999999999999 99999999751 0 1123799999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCceEEEEEEeeee
Q 006908 116 GEDDCPVAAPSTFPKDEELHFEIEMIDF 143 (626)
Q Consensus 116 g~~~~~~~~~~~i~~~~~lv~~v~l~~~ 143 (626)
|..+ ..++..|....+
T Consensus 81 Ge~~------------~~lv~~vp~~~f 96 (231)
T 3prb_A 81 GKRD------------PSKIKLIPLSEF 96 (231)
T ss_dssp CCCC------------GGGEEEEETHHH
T ss_pred CCCC------------hHHEEecCHHHC
Confidence 9764 456666655554
No 75
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.52 E-value=7.6e-14 Score=124.06 Aligned_cols=120 Identities=26% Similarity=0.426 Sum_probs=106.4
Q ss_pred HHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 006908 397 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA 476 (626)
Q Consensus 397 ~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~ 476 (626)
.+..+...|..++..|+|++|+..|++++. ..|.+ ..+++++|.|++.+++|.+|+..+.+++.+
T Consensus 8 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~----~~~~~-----------~~~~~~l~~~~~~~~~~~~A~~~~~~al~~ 72 (137)
T 3q49_B 8 SAQELKEQGNRLFVGRKYPEAAACYGRAIT----RNPLV-----------AVYYTNRALCYLKMQQPEQALADCRRALEL 72 (137)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCcHHHHHHHHHHHHh----hCcCc-----------HHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 366788999999999999999999999999 55655 458999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-----CHHHHHHHHHHHHHHHHHH
Q 006908 477 NPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKS-----SEPDATAALSKLKKQRQEV 532 (626)
Q Consensus 477 dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~-----~~~~~~~~l~~l~~~~~~~ 532 (626)
+|.++.+++++|.++..+|++++|+..|+++++++|+ + ..+...+..+..+....
T Consensus 73 ~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~-~~~~~~l~~~~~~~~~~ 132 (137)
T 3q49_B 73 DGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFG-DDIPSALRIAKKKRWNS 132 (137)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCT-THHHHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHChhHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999887 4 46777777766555443
No 76
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=99.52 E-value=2.1e-15 Score=137.56 Aligned_cols=87 Identities=21% Similarity=0.349 Sum_probs=72.9
Q ss_pred CCCCCEEEEEEEEEEcCCcEEEeeccC-------C-C-CCCcceEEEeCCCccchhHHhhcCCCCCCcEEEEEeeccccc
Q 006908 45 PSDGDQVAYHCTVRTLDGVIVESTRSE-------Y-G-GKGIPIRHVLGKSKILLGLLEGIPTMLKGEVSMFKMKPQMHY 115 (626)
Q Consensus 45 p~~gd~V~v~y~~~~~dG~~~~st~~~-------~-~-~~~~p~~~~lg~~~~~~gle~~l~~m~~Ge~~~~~ip~~~~~ 115 (626)
++.||.|++||++++.+|++|+||+.. + . ....|+.|.+|.+++++||+++|.+|++|++++|.|||+.||
T Consensus 2 i~~gd~V~v~Y~g~~~dG~~fdss~~~~a~~~g~~~~~~~~~P~~f~~G~g~vi~G~eeaL~gm~~Ge~~~v~ipp~~aY 81 (151)
T 1ix5_A 2 VDKGVKIKVDYIGKLESGDVFDTSIEEVAKEAGIYAPDREYEPLEFVVGEGQLIQGFEEAVLDMEVGDEKTVKIPAEKAY 81 (151)
T ss_dssp CCTTCEEEECCEECCTTSCCCEESCHHHHHHHTCCCSSCCCCCEEEETTTTCSCHHHHHHHHTCCTTCCCEEEECTTTSS
T ss_pred CCCCCEEEEEEEEEECCCCEEEecchhhcccccccccccCCCCEEEEECCCChhHHHHHHHcCCCCCCEEEEEECcHHHC
Confidence 688999999999998899999999620 0 0 023699999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCceEEEEEEeeee
Q 006908 116 GEDDCPVAAPSTFPKDEELHFEIEMIDF 143 (626)
Q Consensus 116 g~~~~~~~~~~~i~~~~~lv~~v~l~~~ 143 (626)
|..+ ..+++.|.+..+
T Consensus 82 G~~~------------~~~v~~v~~~~f 97 (151)
T 1ix5_A 82 GNRN------------EMLIQKIPRDAF 97 (151)
T ss_dssp CSCC------------STTBCCEETHHH
T ss_pred CCCC------------ccEEEEEEHHHc
Confidence 9763 445666666665
No 77
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=99.51 E-value=3.7e-13 Score=122.58 Aligned_cols=84 Identities=13% Similarity=0.056 Sum_probs=76.2
Q ss_pred CCCCCCCeEEEEEEEEeC-CCcEEEecCCCccEEEEcCCCCccchHHHhhccCCCCcEEEEEEeCCccCCCCCCCCCCCc
Q 006908 167 ETPRAPYEVKAWISAKTG-DGKLILSHREGEPYFFTFGKSEVPKGLEMGIGTMTREEKAVIYVTSQYLTPSPLMPVVEGC 245 (626)
Q Consensus 167 ~~~~~g~~V~v~y~~~~~-~g~~~~s~~~~~p~~~~~g~g~~~~gle~~l~~mk~Ge~~~~~v~~~~~~g~~~~~~ip~~ 245 (626)
..++.||.|++||++++. +|++|+|+..+.|+.|.+|.|+++|||+++|.+|++|++++|.|||+.+||. .+
T Consensus 5 ~~i~~gd~V~v~Y~g~~~~dG~~fdss~~~~p~~f~~G~g~vipg~e~aL~gm~~Ge~~~v~ipp~~aYG~-------~~ 77 (151)
T 2kr7_A 5 DLESIKQAALIEYEVREQGSSIVLDSNISKEPLEFIIGTNQIIAGLEKAVLKAQIGEWEEVVIAPEEAYGV-------YE 77 (151)
T ss_dssp CCTTSCCEEEEEEEEEESSCSCEEEESTTTCCEEEETTCCCSCHHHHHHHTTCCBTCEEEEEECGGGTTCS-------SC
T ss_pred cCCCCCCEEEEEEEEEECCCCCEEEeCCCCcCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEecHHHcCC-------CC
Confidence 467889999999999987 9999999987799999999999999999999999999999999999999994 44
Q ss_pred ceEEEEEEEeeE
Q 006908 246 EEVHFEVELVHL 257 (626)
Q Consensus 246 ~~l~~~v~l~~~ 257 (626)
..+++.|.+..|
T Consensus 78 ~~~v~~v~~~~f 89 (151)
T 2kr7_A 78 SSYLQEVPRDQF 89 (151)
T ss_dssp SCEEEEEEGGGG
T ss_pred cceEEEEcHHHc
Confidence 567788877776
No 78
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.50 E-value=9.7e-14 Score=126.84 Aligned_cols=113 Identities=14% Similarity=0.105 Sum_probs=94.7
Q ss_pred HHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 006908 397 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA 476 (626)
Q Consensus 397 ~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~ 476 (626)
.+..+...|..+++.|+|++|+..|++++. +.|.+ ..+|+++|.||.++|++++|+.++.+++++
T Consensus 30 ~~~~~~~la~~y~~~~~~~~A~~~~~~al~----~~p~~-----------~~a~~~lg~~~~~~~~~~~A~~~~~~al~~ 94 (150)
T 4ga2_A 30 KSIKGFYFAKLYYEAKEYDLAKKYICTYIN----VQERD-----------PKAHRFLGLLYELEENTDKAVECYRRSVEL 94 (150)
T ss_dssp HHTTHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCCC-----------HHHHHHHHHHHHHcCchHHHHHHHHHHHHh
Confidence 344556789999999999999999999998 67766 458999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHH-HHHHHhcCCCCHHHHHHHHHHH
Q 006908 477 NPAHVKGLYRRGMAYMALGEFEEAQRD-FEMMMKVDKSSEPDATAALSKL 525 (626)
Q Consensus 477 dp~~~ka~~~~g~a~~~lg~~~eA~~~-~~kAl~l~P~~~~~~~~~l~~l 525 (626)
+|+++.+|+++|.++..+|++++|... +++|++++|++ +.+...+..+
T Consensus 95 ~p~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l~P~~-~~~~~l~~~l 143 (150)
T 4ga2_A 95 NPTQKDLVLKIAELLCKNDVTDGRAKYWVERAAKLFPGS-PAVYKLKEQL 143 (150)
T ss_dssp CTTCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHSTTC-HHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhCcCC-HHHHHHHHHH
Confidence 999999999999999999999876665 58999999998 5555554444
No 79
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=99.50 E-value=1.3e-13 Score=126.99 Aligned_cols=84 Identities=17% Similarity=0.235 Sum_probs=74.8
Q ss_pred CCCCCCeEEEEEEEEeCCCcEEEecCC-CccEEEEcCCCCccchHHHhhccCCCCcEEEEEEeCCccCCCCCCCCCCCcc
Q 006908 168 TPRAPYEVKAWISAKTGDGKLILSHRE-GEPYFFTFGKSEVPKGLEMGIGTMTREEKAVIYVTSQYLTPSPLMPVVEGCE 246 (626)
Q Consensus 168 ~~~~g~~V~v~y~~~~~~g~~~~s~~~-~~p~~~~~g~g~~~~gle~~l~~mk~Ge~~~~~v~~~~~~g~~~~~~ip~~~ 246 (626)
.++.|+.|+|||++++.+|++|+|+.. +.|+.|.+|.+++||||+++|.+|++|++++|.|||+.|||. .+.
T Consensus 24 ~i~~gd~V~v~Y~g~l~dG~vfDss~~~~~P~~f~lG~g~vipG~eeaL~gm~~Ge~~~v~Ipp~~AYG~-------~~~ 96 (169)
T 4dt4_A 24 SVQSNSAVLVHFTLKLDDGTTAESTRNNGKPALFRLGDASLSEGLEQHLLGLKVGDKTTFSLEPDAAFGV-------PSP 96 (169)
T ss_dssp SCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHTTCCTTCEEEEEECGGGTTCC-------CCG
T ss_pred cCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEChHHhcCC-------CCh
Confidence 578999999999999999999999864 589999999999999999999999999999999999999994 456
Q ss_pred eEEEEEEEeeEE
Q 006908 247 EVHFEVELVHLI 258 (626)
Q Consensus 247 ~l~~~v~l~~~~ 258 (626)
.+++.|.+..|.
T Consensus 97 ~lv~~vp~~~f~ 108 (169)
T 4dt4_A 97 DLIQYFSRREFM 108 (169)
T ss_dssp GGEEEEEGGGGT
T ss_pred HHEEEeCHHHCC
Confidence 666777766663
No 80
>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1
Probab=99.49 E-value=2.6e-14 Score=123.58 Aligned_cols=84 Identities=21% Similarity=0.196 Sum_probs=73.9
Q ss_pred CCCCCCCeEEEEEEEEeCCCcEEEecCCCccEEEEcCCCCccchHHHhhccCCCCcEEEEEEe-CCccCCCCCCCCCCCc
Q 006908 167 ETPRAPYEVKAWISAKTGDGKLILSHREGEPYFFTFGKSEVPKGLEMGIGTMTREEKAVIYVT-SQYLTPSPLMPVVEGC 245 (626)
Q Consensus 167 ~~~~~g~~V~v~y~~~~~~g~~~~s~~~~~p~~~~~g~g~~~~gle~~l~~mk~Ge~~~~~v~-~~~~~g~~~~~~ip~~ 245 (626)
..++.||.|+|||++++ ||++|+++. +.|+.|.+|.+++||||+++|.+|++|++++|.|| |.. ||..+ .++
T Consensus 28 ~~~~~gD~V~v~Y~g~~-dG~~fdss~-~~p~~f~lG~g~vi~G~ee~L~Gmk~Ge~~~v~i~fP~~-Yg~~~----~~g 100 (113)
T 1hxv_A 28 KKLANGDIAIIDFTGIV-DNKKLASAS-AQNYELTIGSNSFIKGFETGLIAMKVNQKKTLALTFPSD-YHVKE----LQS 100 (113)
T ss_dssp -CCCSSEEEEEEEEEEE-TTEECSTTC-CSEEEEEETSSCSCTTHHHHHHTSCSSEEEEECCCCCTT-SSSSG----GGS
T ss_pred CCCCCCCEEEEEEEEEE-CCEEcccCC-ccCEEEEECCCChhHHHHHHHCCCCCCCEEEEEEeCchh-hCcCC----CCC
Confidence 46889999999999998 999999874 78999999999999999999999999999999996 544 88543 256
Q ss_pred ceEEEEEEEeeE
Q 006908 246 EEVHFEVELVHL 257 (626)
Q Consensus 246 ~~l~~~v~l~~~ 257 (626)
++++|+|+|+++
T Consensus 101 ~~l~F~V~l~~V 112 (113)
T 1hxv_A 101 KPVTFEVVLKAI 112 (113)
T ss_dssp CCCEEEEEECCB
T ss_pred CEEEEEEEEEEE
Confidence 899999999875
No 81
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=99.47 E-value=3.2e-13 Score=127.67 Aligned_cols=82 Identities=17% Similarity=0.098 Sum_probs=73.0
Q ss_pred CCCCCeEEEEEEEEeCCCcEEEecCCCccEEEEcCCCCccchHHHhhccCCCCcEEEEEEeCCccCCCCCCCCCCCcceE
Q 006908 169 PRAPYEVKAWISAKTGDGKLILSHREGEPYFFTFGKSEVPKGLEMGIGTMTREEKAVIYVTSQYLTPSPLMPVVEGCEEV 248 (626)
Q Consensus 169 ~~~g~~V~v~y~~~~~~g~~~~s~~~~~p~~~~~g~g~~~~gle~~l~~mk~Ge~~~~~v~~~~~~g~~~~~~ip~~~~l 248 (626)
++.||.|+|||++++.+|++|+|+....|+.|.+|.++++|||+++|.+|++|++++|.|||+.+||... ..+
T Consensus 3 i~~gd~V~v~Y~g~~~dG~~fdss~~~~P~~f~lG~g~vipG~eeaL~Gm~vGe~~~v~Ippe~aYGe~~-------~~l 75 (196)
T 2kfw_A 3 VAKDLVVSLAYQVRTEDGVLVDESPVSAPLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYD-------ENL 75 (196)
T ss_dssp CCSSCEEEEEEEEEETTTEEEEECCTTSCCEEESSSSSSCHHHHHHHSSSCTTCEEEEECSTTTTSSCCC-------TTT
T ss_pred CCCCCEEEEEEEEEECCCCEEEecCCCCCEEEEECCCCcchHHHHHHcCCCCCCEEEEEeCcHHhcCCCC-------hhh
Confidence 6789999999999988999999998779999999999999999999999999999999999999999543 445
Q ss_pred EEEEEEeeE
Q 006908 249 HFEVELVHL 257 (626)
Q Consensus 249 ~~~v~l~~~ 257 (626)
++.|.+..|
T Consensus 76 V~~vp~~~f 84 (196)
T 2kfw_A 76 VQRVPKDVF 84 (196)
T ss_dssp CEEECGGGC
T ss_pred EEEEEHHHC
Confidence 566666665
No 82
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=99.46 E-value=9.2e-13 Score=120.54 Aligned_cols=77 Identities=18% Similarity=0.315 Sum_probs=69.8
Q ss_pred CCCCCEEEEEEEEEEcCCcEEEeeccCCCCCCcceEEEeCCCccchhHHhhcCCCCCCcEEEEEeeccccccCCCCCCCC
Q 006908 45 PSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTMLKGEVSMFKMKPQMHYGEDDCPVAA 124 (626)
Q Consensus 45 p~~gd~V~v~y~~~~~dG~~~~st~~~~~~~~~p~~~~lg~~~~~~gle~~l~~m~~Ge~~~~~ip~~~~~g~~~~~~~~ 124 (626)
++.||.|++||+++ .||++|+||+ +.|.+|.++++|||+++|.+|++|++++|.|||+.+||..
T Consensus 3 i~~gd~V~v~Y~g~-~dG~~fdss~---------~~f~~G~g~vipG~e~aL~Gm~~Ge~~~v~ipp~~aYG~~------ 66 (158)
T 3cgm_A 3 VGQDKVVTIRYTLQ-VEGEVLDQGE---------LSYLHGHRNLIPGLEEALEGREEGEAFQAHVPAEKAYGPH------ 66 (158)
T ss_dssp CCTTEEEEEEEEEE-ETTEEEEEEE---------EEEETTSSSSCHHHHHHHTTCBTTCEEEEEECGGGTTCCC------
T ss_pred CCCCCEEEEEEEEE-ECCEEEEeeE---------EEEEECCCCcChHHHHHHcCCCCCCEEEEEECcHHHcCCC------
Confidence 57899999999999 8999999874 8899999999999999999999999999999999999975
Q ss_pred CCCCCCCceEEEEEEeeee
Q 006908 125 PSTFPKDEELHFEIEMIDF 143 (626)
Q Consensus 125 ~~~i~~~~~lv~~v~l~~~ 143 (626)
+..+++.|.+..+
T Consensus 67 ------~~~lv~~v~~~~f 79 (158)
T 3cgm_A 67 ------DPEGVQVVPLSAF 79 (158)
T ss_dssp ------CGGGEEEEEGGGS
T ss_pred ------CcceEEEEEHHHC
Confidence 4667888877666
No 83
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.45 E-value=1.2e-12 Score=111.93 Aligned_cols=114 Identities=26% Similarity=0.461 Sum_probs=103.6
Q ss_pred HHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 006908 397 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA 476 (626)
Q Consensus 397 ~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~ 476 (626)
.+..+...|..++..|+|++|+..|.+++. ..|.+ ..+++++|.|+..+++|.+|+..+.+++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~----~~~~~-----------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 67 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIK----LDPHN-----------HVLYSNRSAAYAKKGDYQKAYEDGCKTVDL 67 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHH----HCCCc-----------HHHHHHHHHHHHhhccHHHHHHHHHHHHHh
Confidence 567888999999999999999999999999 45554 458999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 006908 477 NPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLK 526 (626)
Q Consensus 477 dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~ 526 (626)
+|.+..+++++|.++..+|++++|+..|+++++++|++ ..+...+..+.
T Consensus 68 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~-~~~~~~l~~~~ 116 (118)
T 1elw_A 68 KPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANN-PQLKEGLQNME 116 (118)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTC-HHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCC-HHHHHHHHHhh
Confidence 99999999999999999999999999999999999997 56776666654
No 84
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.44 E-value=2.9e-13 Score=123.64 Aligned_cols=112 Identities=11% Similarity=0.060 Sum_probs=96.4
Q ss_pred hhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Q 006908 404 TGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKG 483 (626)
Q Consensus 404 ~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~~~ka 483 (626)
.|..+..+|++++|+..|++++. ..|. ....++++|.+|+++|+|++|+.++.++|+++|+++.+
T Consensus 3 LG~~~~~~~~~e~ai~~~~~a~~----~~p~-----------~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a 67 (150)
T 4ga2_A 3 LGSMRRSKADVERYIASVQGSTP----SPRQ-----------KSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKA 67 (150)
T ss_dssp ----CCCHHHHHHHHHHHHHHSC----SHHH-----------HHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred hHHHHHHcChHHHHHHHHHHhcc----cCcc-----------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Confidence 58888999999999999999987 3322 24578899999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 006908 484 LYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQE 531 (626)
Q Consensus 484 ~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~~~~~ 531 (626)
|+++|.++..+|++++|+..|++|++++|++ ..+...+..+......
T Consensus 68 ~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~-~~~~~~la~~~~~~~~ 114 (150)
T 4ga2_A 68 HRFLGLLYELEENTDKAVECYRRSVELNPTQ-KDLVLKIAELLCKNDV 114 (150)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHcCchHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHHcCC
Confidence 9999999999999999999999999999998 6788888877655443
No 85
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.43 E-value=5.6e-12 Score=115.21 Aligned_cols=119 Identities=27% Similarity=0.461 Sum_probs=107.5
Q ss_pred hhhHHHHHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHH
Q 006908 391 FDGIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEAC 470 (626)
Q Consensus 391 ~~e~~~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~ 470 (626)
.......+..+...|..++..|+|.+|+..|.+++. ..|.+ ..+++++|.|+..+++|.+|+..+
T Consensus 6 ~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~----~~~~~-----------~~~~~~~a~~~~~~~~~~~A~~~~ 70 (166)
T 1a17_A 6 ADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIE----LNPSN-----------AIYYGNRSLAYLRTECYGYALGDA 70 (166)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HSTTC-----------HHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH----hCCCC-----------hHHHHHHHHHHHHcCCHHHHHHHH
Confidence 356778899999999999999999999999999999 45554 458999999999999999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q 006908 471 NKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKL 525 (626)
Q Consensus 471 ~~aL~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l 525 (626)
.+++.++|.++.+++++|.++..+|++++|+..|+++++++|.+ ..+...+..+
T Consensus 71 ~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~-~~~~~~~~~~ 124 (166)
T 1a17_A 71 TRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHD-KDAKMKYQEC 124 (166)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC-HHHHHHHHHH
T ss_pred HHHHHhCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCC-HHHHHHHHHH
Confidence 99999999999999999999999999999999999999999997 5566555554
No 86
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=99.42 E-value=1.1e-13 Score=126.23 Aligned_cols=81 Identities=20% Similarity=0.117 Sum_probs=70.4
Q ss_pred CCCCCeEEEEEEEEeCCCcEEEecCC--------------CccEEEEcCCCCccchHHHhhccCCCCcEEEEEEeCCccC
Q 006908 169 PRAPYEVKAWISAKTGDGKLILSHRE--------------GEPYFFTFGKSEVPKGLEMGIGTMTREEKAVIYVTSQYLT 234 (626)
Q Consensus 169 ~~~g~~V~v~y~~~~~~g~~~~s~~~--------------~~p~~~~~g~g~~~~gle~~l~~mk~Ge~~~~~v~~~~~~ 234 (626)
++.||.|+|||++++ +|++|+|+.. +.|+.|.+|.|+++|||++||.+|++|++++|.|||+.||
T Consensus 2 i~~Gd~V~v~Y~g~l-dG~vfDss~~~~a~~~g~~~~~~~~~P~~f~vG~g~vi~G~eeaL~gm~~Ge~~~v~Ipp~~aY 80 (157)
T 3pr9_A 2 VEKGKMVKISYDGYV-DGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEKAF 80 (157)
T ss_dssp CCTTCEEEEEEEEEE-TTEEEEESCHHHHHHHTCCCTTSCCSCEEEETTSSSSCHHHHHHHHHCCTTCEEEEEECGGGTT
T ss_pred CCCCCEEEEEEEEEE-CCEEEEeccccccccccccccccCCCCEEEEECCCcHHHHHHHHHcCCCCCCEEEEEECcHHhc
Confidence 578999999999999 9999998854 3899999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcceEEEEEEEeeE
Q 006908 235 PSPLMPVVEGCEEVHFEVELVHL 257 (626)
Q Consensus 235 g~~~~~~ip~~~~l~~~v~l~~~ 257 (626)
|.. +..++..|.+..|
T Consensus 81 G~~-------~~~~V~~v~~~~f 96 (157)
T 3pr9_A 81 GKR-------DPSKIKLIPLSEF 96 (157)
T ss_dssp CCC-------CGGGEEEEEHHHH
T ss_pred CCC-------ChHhEEEcCHHHC
Confidence 944 4445566655554
No 87
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.42 E-value=1.3e-12 Score=149.18 Aligned_cols=116 Identities=19% Similarity=0.298 Sum_probs=68.1
Q ss_pred HHHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 006908 396 DEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLD 475 (626)
Q Consensus 396 ~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~ 475 (626)
..+..+.+.|+.+.++|+|++|+..|++||+ +.|++ ..+|+|+|.+|.++|+|++|+.+|.+||+
T Consensus 7 ~~a~al~nLG~~~~~~G~~~eAi~~~~kAl~----l~P~~-----------~~a~~nLg~~l~~~g~~~eA~~~~~~Al~ 71 (723)
T 4gyw_A 7 THADSLNNLANIKREQGNIEEAVRLYRKALE----VFPEF-----------AAAHSNLASVLQQQGKLQEALMHYKEAIR 71 (723)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCSCC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCCC-----------HHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4566777777777777788888888887777 55555 23455555555555555555555555555
Q ss_pred hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Q 006908 476 ANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKK 527 (626)
Q Consensus 476 ~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~ 527 (626)
++|+++.+|+++|.+|..+|++++|++.|++|++++|++ ..+..+|..+..
T Consensus 72 l~P~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~-~~a~~~Lg~~~~ 122 (723)
T 4gyw_A 72 ISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF-ADAHSNLASIHK 122 (723)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHH
Confidence 555555555555555555555555555555555555554 344444444433
No 88
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=99.42 E-value=2e-12 Score=119.83 Aligned_cols=82 Identities=23% Similarity=0.302 Sum_probs=72.2
Q ss_pred CCCCCEEEEEEEEEEcCCcEEEeeccCCCCCCcceEEEeCCCccchhHHhhcCCCCCCcEEEEEeeccccccCCCCCCCC
Q 006908 45 PSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTMLKGEVSMFKMKPQMHYGEDDCPVAA 124 (626)
Q Consensus 45 p~~gd~V~v~y~~~~~dG~~~~st~~~~~~~~~p~~~~lg~~~~~~gle~~l~~m~~Ge~~~~~ip~~~~~g~~~~~~~~ 124 (626)
++.||.|+|+|++++.+|++|+||+. +.|+.|.+|.++++|||+++|.+|++|++++|.|||+.+||..+
T Consensus 3 i~~gd~V~v~Y~g~~~dG~~fdss~~-----~~P~~f~lG~g~vipG~eeaL~Gm~~Ge~~~v~ippe~aYG~~~----- 72 (171)
T 2k8i_A 3 VAKDLVVSLAYQVRTEDGVLVDESPV-----SAPLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYD----- 72 (171)
T ss_dssp CCTTEEEEEEEEEEETTSCEEEECCS-----SSCEEEETTSCSSCSHHHHHHTTCCTTCEEEEEEETTTSSCCCC-----
T ss_pred CCCCCEEEEEEEEEECCCCEEeeccC-----CcCEEEEECCCCcchHHHHHHcCCCCCCEEEEEECcHHhcCCCC-----
Confidence 67899999999999889999999984 47999999999999999999999999999999999999999763
Q ss_pred CCCCCCCceEEEEEEeeee
Q 006908 125 PSTFPKDEELHFEIEMIDF 143 (626)
Q Consensus 125 ~~~i~~~~~lv~~v~l~~~ 143 (626)
..+++.|....+
T Consensus 73 -------~~~v~~v~~~~f 84 (171)
T 2k8i_A 73 -------ENLVQRVPKDVF 84 (171)
T ss_dssp -------TTSEEEEEGGGG
T ss_pred -------hhhEEEeeHHHC
Confidence 345666665555
No 89
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.42 E-value=2.3e-12 Score=124.31 Aligned_cols=125 Identities=14% Similarity=0.118 Sum_probs=102.7
Q ss_pred HHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHH-----HhhhhhHHHHHHHHHHHHcCCHHHHHHHHHH
Q 006908 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKV-----FVGKRNLLHLNVAACLLKLGECRKSIEACNK 472 (626)
Q Consensus 398 a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~-----~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~ 472 (626)
+..+..+|..++..|+|++|+..|++++. ..|.+.+-... .......+++++|.||.++|+|++|+..|.+
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~----~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~ 79 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIA----LNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKE 79 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHH----hCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 55677899999999999999999999999 45543220000 0011122334499999999999999999999
Q ss_pred HHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Q 006908 473 VLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKK 527 (626)
Q Consensus 473 aL~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~ 527 (626)
+|+++|+++.+++++|.++..+|++++|+..|+++++++|++ ..+...+..+..
T Consensus 80 al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~-~~a~~~lg~~~~ 133 (208)
T 3urz_A 80 LLQKAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADN-LAANIFLGNYYY 133 (208)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHH
T ss_pred HHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC-HHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998 678888877653
No 90
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.41 E-value=3.3e-12 Score=114.42 Aligned_cols=117 Identities=31% Similarity=0.486 Sum_probs=103.7
Q ss_pred HHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 006908 397 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA 476 (626)
Q Consensus 397 ~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~ 476 (626)
.+..+...|..++..|+|.+|+..|++++. ..|.+ .....++.++|.|++++++|.+|+..|.+++.+
T Consensus 27 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~----~~~~~--------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 94 (148)
T 2dba_A 27 SVEQLRKEGNELFKCGDYGGALAAYTQALG----LDATP--------QDQAVLHRNRAACHLKLEDYDKAETEASKAIEK 94 (148)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHHHT----SCCCH--------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHH----Hcccc--------hHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhh
Confidence 466788999999999999999999999998 55543 123568999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 006908 477 NPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLK 526 (626)
Q Consensus 477 dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~ 526 (626)
+|.++.+++++|.++..+|++++|+..|+++++++|++ ..+...+..+.
T Consensus 95 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~-~~~~~~l~~~~ 143 (148)
T 2dba_A 95 DGGDVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKN-KVFQEALRNIS 143 (148)
T ss_dssp TSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSSC-HHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCc-HHHHHHHHHHH
Confidence 99999999999999999999999999999999999997 56666666553
No 91
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.41 E-value=8.7e-13 Score=115.84 Aligned_cols=99 Identities=11% Similarity=0.025 Sum_probs=88.7
Q ss_pred HHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 006908 401 IRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANPAH 480 (626)
Q Consensus 401 ~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~~ 480 (626)
+...|..+++.|+|++|+..|++++. ..|.+ ..+|+++|.|+..+|++.+|+..+.++++++|++
T Consensus 20 ~~~~g~~~~~~g~~~~A~~~~~~al~----~~P~~-----------~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~ 84 (121)
T 1hxi_A 20 PMEEGLSMLKLANLAEAALAFEAVCQ----KEPER-----------EEAWRSLGLTQAENEKDGLAIIALNHARMLDPKD 84 (121)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH----HSTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHH----HCCCC-----------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 45688899999999999999999999 67766 4589999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC
Q 006908 481 VKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSS 514 (626)
Q Consensus 481 ~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~ 514 (626)
+.+++.+|.++..+|++++|+..|+++++++|++
T Consensus 85 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~ 118 (121)
T 1hxi_A 85 IAVHAALAVSHTNEHNANAALASLRAWLLSQPQY 118 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCC
Confidence 9999999999999999999999999999999986
No 92
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.40 E-value=8e-13 Score=120.52 Aligned_cols=105 Identities=20% Similarity=0.259 Sum_probs=92.8
Q ss_pred ccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHhCCC
Q 006908 410 KEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGEC----------RKSIEACNKVLDANPA 479 (626)
Q Consensus 410 ~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~----------~~A~~~~~~aL~~dp~ 479 (626)
+.+.|++|+..|++++. ++|.+ ..+|+|+|.|+..++++ ++|+..|++||+++|+
T Consensus 14 r~~~feeA~~~~~~Ai~----l~P~~-----------aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~ 78 (158)
T 1zu2_A 14 RILLFEQIRQDAENTYK----SNPLD-----------ADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPK 78 (158)
T ss_dssp HHHHHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHhHHHHHHHHHHHHHH----HCCCC-----------HHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcC
Confidence 45679999999999999 78877 45899999999999876 4999999999999999
Q ss_pred CHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 006908 480 HVKGLYRRGMAYMALG-----------EFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQ 530 (626)
Q Consensus 480 ~~ka~~~~g~a~~~lg-----------~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~~~~ 530 (626)
+..|||++|++|..+| +|++|+++|++|++++|++ ...++.++.+.+...
T Consensus 79 ~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~-~~y~~al~~~~ka~e 139 (158)
T 1zu2_A 79 KDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDN-THYLKSLEMTAKAPQ 139 (158)
T ss_dssp CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHTHHH
T ss_pred cHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHhCHh
Confidence 9999999999999985 8999999999999999998 677777776655444
No 93
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.40 E-value=7.7e-12 Score=108.84 Aligned_cols=121 Identities=26% Similarity=0.389 Sum_probs=106.9
Q ss_pred hhHHHHHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHH
Q 006908 392 DGIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACN 471 (626)
Q Consensus 392 ~e~~~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~ 471 (626)
+.....+..+...|..++..|+|+.|+..|.+++. ..|.+ ..++.++|.|+..+++|.+|+..+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~----~~~~~-----------~~~~~~~a~~~~~~~~~~~A~~~~~ 70 (131)
T 2vyi_A 6 EEDSAEAERLKTEGNEQMKVENFEAAVHFYGKAIE----LNPAN-----------AVYFCNRAAAYSKLGNYAGAVQDCE 70 (131)
T ss_dssp -CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hcchhhhHHHHHHHHHHHHccCHHHHHHHHHHHHH----cCCCC-----------HHHHHHHHHHHHHhhchHHHHHHHH
Confidence 34456788899999999999999999999999998 45544 4588999999999999999999999
Q ss_pred HHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q 006908 472 KVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQ 528 (626)
Q Consensus 472 ~aL~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~~ 528 (626)
+++.++|.+..+++++|.++..+|++++|+..|+++++++|++ ..+...+..+...
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~-~~~~~~l~~~~~~ 126 (131)
T 2vyi_A 71 RAICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDN-ETYKSNLKIAELK 126 (131)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC-HHHHHHHHHHHHH
T ss_pred HHHhcCccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCccc-hHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999987 5666666665443
No 94
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.39 E-value=3.3e-12 Score=112.02 Aligned_cols=114 Identities=25% Similarity=0.470 Sum_probs=103.0
Q ss_pred HHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 006908 397 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA 476 (626)
Q Consensus 397 ~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~ 476 (626)
.+..+...|..++..|+|++|+..|.+++. ..|.+ ..+++++|.|+..+++|++|+..+.+++.+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~----~~~~~-----------~~~~~~la~~~~~~~~~~~A~~~~~~a~~~ 79 (133)
T 2lni_A 15 LALMVKNKGNECFQKGDYPQAMKHYTEAIK----RNPKD-----------AKLYSNRAACYTKLLEFQLALKDCEECIQL 79 (133)
T ss_dssp HHHHHHHHHHHHHHTTCSHHHHHHHHHHHT----TCTTC-----------HHHHHHHHHHHTTTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHH----cCCCc-----------HHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 567788999999999999999999999998 56655 458999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 006908 477 NPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLK 526 (626)
Q Consensus 477 dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~ 526 (626)
+|.++.+++++|.++..+|++++|+..|+++++++|.+ ..+...+..+.
T Consensus 80 ~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~-~~~~~~l~~~~ 128 (133)
T 2lni_A 80 EPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSC-KEAADGYQRCM 128 (133)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGG-THHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCc-hHHHHHHHHHH
Confidence 99999999999999999999999999999999999986 55666666554
No 95
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.38 E-value=4.3e-12 Score=111.29 Aligned_cols=114 Identities=17% Similarity=0.200 Sum_probs=98.5
Q ss_pred HHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 006908 400 KIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANPA 479 (626)
Q Consensus 400 ~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~ 479 (626)
.+...|..++..|+|++|+..|++++. ..|.+. ....+++++|.|++++|+|.+|+..+.+++..+|+
T Consensus 4 ~~~~~a~~~~~~~~~~~A~~~~~~~~~----~~p~~~--------~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~ 71 (129)
T 2xev_A 4 TAYNVAFDALKNGKYDDASQLFLSFLE----LYPNGV--------YTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPT 71 (129)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHH----HCSSST--------THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHH----HCCCCc--------ccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCC
Confidence 356788999999999999999999999 445442 12358899999999999999999999999999999
Q ss_pred C---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 006908 480 H---VKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLK 526 (626)
Q Consensus 480 ~---~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~ 526 (626)
+ +.+++++|.++..+|++++|+..|+++++..|++ ..+...+..+.
T Consensus 72 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~-~~~~~a~~~l~ 120 (129)
T 2xev_A 72 HDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYPGS-DAARVAQERLQ 120 (129)
T ss_dssp STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTS-HHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCC-hHHHHHHHHHH
Confidence 9 8999999999999999999999999999999997 45555555444
No 96
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.38 E-value=5.1e-12 Score=110.13 Aligned_cols=119 Identities=23% Similarity=0.378 Sum_probs=105.1
Q ss_pred HHHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 006908 396 DEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLD 475 (626)
Q Consensus 396 ~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~ 475 (626)
+.+..+...|..++..|+|.+|+..|.+++. ..|.+ ..+++++|.|+..+++|.+|+..+.+++.
T Consensus 2 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~----~~~~~-----------~~~~~~la~~~~~~~~~~~A~~~~~~~~~ 66 (131)
T 1elr_A 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKE----LDPTN-----------MTYITNQAAVYFEKGDYNKCRELCEKAIE 66 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh----cCCcc-----------HHHHHHHHHHHHHhccHHHHHHHHHHHHh
Confidence 3567888999999999999999999999999 44544 45889999999999999999999999999
Q ss_pred hCCCC-------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 006908 476 ANPAH-------VKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQE 531 (626)
Q Consensus 476 ~dp~~-------~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~~~~~ 531 (626)
++|.+ ..+++++|.++..+|++++|+..|++++++.|+ ..+...+..+...+.+
T Consensus 67 ~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~ 127 (131)
T 1elr_A 67 VGRENREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHRT--PDVLKKCQQAEKILKE 127 (131)
T ss_dssp HHHHSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC--HHHHHHHHHHHHHHHH
T ss_pred hccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC--HHHHHHHHHHHHHHHH
Confidence 99877 999999999999999999999999999999984 5677777777665543
No 97
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=99.36 E-value=6.4e-13 Score=121.04 Aligned_cols=82 Identities=15% Similarity=0.149 Sum_probs=71.2
Q ss_pred CCCCCeEEEEEEEEeCCCcEEEecC--------------CCccEEEEcCCCCccchHHHhhccCCCCcEEEEEEeCCccC
Q 006908 169 PRAPYEVKAWISAKTGDGKLILSHR--------------EGEPYFFTFGKSEVPKGLEMGIGTMTREEKAVIYVTSQYLT 234 (626)
Q Consensus 169 ~~~g~~V~v~y~~~~~~g~~~~s~~--------------~~~p~~~~~g~g~~~~gle~~l~~mk~Ge~~~~~v~~~~~~ 234 (626)
++.||.|++||++++.+|++|+|+. ...|+.|.+|.|+++|||+++|.+|++|++++|.|||+.||
T Consensus 2 i~~gd~V~v~Y~g~~~dG~~fdss~~~~a~~~g~~~~~~~~~P~~f~~G~g~vi~G~eeaL~gm~~Ge~~~v~ipp~~aY 81 (151)
T 1ix5_A 2 VDKGVKIKVDYIGKLESGDVFDTSIEEVAKEAGIYAPDREYEPLEFVVGEGQLIQGFEEAVLDMEVGDEKTVKIPAEKAY 81 (151)
T ss_dssp CCTTCEEEECCEECCTTSCCCEESCHHHHHHHTCCCSSCCCCCEEEETTTTCSCHHHHHHHHTCCTTCCCEEEECTTTSS
T ss_pred CCCCCEEEEEEEEEECCCCEEEecchhhcccccccccccCCCCEEEEECCCChhHHHHHHHcCCCCCCEEEEEECcHHHC
Confidence 5789999999999988999999984 34799999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcceEEEEEEEeeE
Q 006908 235 PSPLMPVVEGCEEVHFEVELVHL 257 (626)
Q Consensus 235 g~~~~~~ip~~~~l~~~v~l~~~ 257 (626)
|..+ ..+++.|.+..|
T Consensus 82 G~~~-------~~~v~~v~~~~f 97 (151)
T 1ix5_A 82 GNRN-------EMLIQKIPRDAF 97 (151)
T ss_dssp CSCC-------STTBCCEETHHH
T ss_pred CCCC-------ccEEEEEEHHHc
Confidence 9554 344555666555
No 98
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.35 E-value=5.8e-12 Score=122.30 Aligned_cols=114 Identities=23% Similarity=0.288 Sum_probs=71.4
Q ss_pred HHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 006908 399 EKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANP 478 (626)
Q Consensus 399 ~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp 478 (626)
..+...|..+++.|+|++|+..|++++. ..|.+ ..+++++|.++.++|++.+|+..+.++++++|
T Consensus 6 ~~~~~lg~~~~~~g~~~~A~~~~~~al~----~~p~~-----------~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P 70 (217)
T 2pl2_A 6 QNPLRLGVQLYALGRYDAALTLFERALK----ENPQD-----------PEALYWLARTQLKLGLVNPALENGKTLVARTP 70 (217)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHT----TSSSC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCCC-----------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 3455667777777777777777777776 55555 23566666666666666666666666666666
Q ss_pred CCHHHHHHHHHHHHHc-----------CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q 006908 479 AHVKGLYRRGMAYMAL-----------GEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQ 528 (626)
Q Consensus 479 ~~~ka~~~~g~a~~~l-----------g~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~~ 528 (626)
+++.+++++|.++..+ |++++|+..|++|++++|++ ..+...+..+...
T Consensus 71 ~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~-~~~~~~lg~~~~~ 130 (217)
T 2pl2_A 71 RYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRY-APLHLQRGLVYAL 130 (217)
T ss_dssp TCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCccc-HHHHHHHHHHHHH
Confidence 6666666666666666 66666666666666666665 4455555544433
No 99
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.34 E-value=4.7e-12 Score=144.70 Aligned_cols=116 Identities=18% Similarity=0.251 Sum_probs=106.7
Q ss_pred HHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 006908 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 477 (626)
Q Consensus 398 a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~d 477 (626)
+..+.+.|+.+++.|+|++|+..|++|++ +.|++ ..+|+|+|.++.++|++++|+.+|++||+++
T Consensus 43 ~~a~~nLg~~l~~~g~~~eA~~~~~~Al~----l~P~~-----------~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~ 107 (723)
T 4gyw_A 43 AAAHSNLASVLQQQGKLQEALMHYKEAIR----ISPTF-----------ADAYSNMGNTLKEMQDVQGALQCYTRAIQIN 107 (723)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCCC-----------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 56778899999999999999999999999 67776 5589999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q 006908 478 PAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQR 529 (626)
Q Consensus 478 p~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~~~ 529 (626)
|+++.+|+++|.+|..+|++++|++.|++|++++|++ ..+..+|..+...+
T Consensus 108 P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~-~~a~~~L~~~l~~~ 158 (723)
T 4gyw_A 108 PAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDF-PDAYCNLAHCLQIV 158 (723)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCC-HHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-hHHHhhhhhHHHhc
Confidence 9999999999999999999999999999999999998 67887877765543
No 100
>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A
Probab=99.34 E-value=7.8e-13 Score=127.84 Aligned_cols=81 Identities=20% Similarity=0.117 Sum_probs=70.5
Q ss_pred CCCCCeEEEEEEEEeCCCcEEEecCC--------------CccEEEEcCCCCccchHHHhhccCCCCcEEEEEEeCCccC
Q 006908 169 PRAPYEVKAWISAKTGDGKLILSHRE--------------GEPYFFTFGKSEVPKGLEMGIGTMTREEKAVIYVTSQYLT 234 (626)
Q Consensus 169 ~~~g~~V~v~y~~~~~~g~~~~s~~~--------------~~p~~~~~g~g~~~~gle~~l~~mk~Ge~~~~~v~~~~~~ 234 (626)
++.||.|+|||++++ +|++|+|+.. +.|+.|.+|.|+++|||++||.+|++|++++|.|||+.||
T Consensus 2 i~~Gd~V~v~Y~g~l-dG~vfDss~~~~A~e~gi~~~~~~~~P~~f~lG~g~vIpG~eeaL~Gm~vGek~~v~Ippe~AY 80 (231)
T 3prb_A 2 VEKGKMVKISYDGYV-DGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEKAF 80 (231)
T ss_dssp CCTTCEEEEEEEEEE-TTEEEEESCHHHHHHTTCCCTTSCCSCEEEETTSSSSCHHHHHHHHTCCTTCEEEEEECGGGTT
T ss_pred CCCCCEEEEEEEEEE-CCEEEEeccchhcccccccccccCCCCEEEEeCCCcHHHHHHHHHcCCCCCCEEEEEeCcHHhc
Confidence 568999999999999 9999998854 3899999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcceEEEEEEEeeE
Q 006908 235 PSPLMPVVEGCEEVHFEVELVHL 257 (626)
Q Consensus 235 g~~~~~~ip~~~~l~~~v~l~~~ 257 (626)
|.. +..++..|.+..|
T Consensus 81 Ge~-------~~~lv~~vp~~~f 96 (231)
T 3prb_A 81 GKR-------DPSKIKLIPLSEF 96 (231)
T ss_dssp CCC-------CGGGEEEEETHHH
T ss_pred CCC-------ChHHEEecCHHHC
Confidence 954 4445566665555
No 101
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.34 E-value=6e-12 Score=127.53 Aligned_cols=102 Identities=25% Similarity=0.443 Sum_probs=96.0
Q ss_pred HHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 006908 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 477 (626)
Q Consensus 398 a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~d 477 (626)
+..++..|+.+++.|+|++|+..|++|+. ..|.+ ..+++|+|.||+++|+|.+|+.++.++++++
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~----~~p~~-----------~~~~~~la~~~~~~~~~~~A~~~~~~al~~~ 68 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAIT----RNPLV-----------AVYYTNRALCYLKMQQPEQALADCRRALELD 68 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCSCC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCcc-----------HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC
Confidence 56788999999999999999999999999 56665 4689999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC
Q 006908 478 PAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSS 514 (626)
Q Consensus 478 p~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~ 514 (626)
|+++++++++|.+|..+|++++|+..|++|++++|++
T Consensus 69 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~ 105 (281)
T 2c2l_A 69 GQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQ 105 (281)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc
Confidence 9999999999999999999999999999999999865
No 102
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=99.34 E-value=1e-11 Score=113.63 Aligned_cols=78 Identities=14% Similarity=0.040 Sum_probs=71.1
Q ss_pred CCCCCeEEEEEEEEeCCCcEEEecCCCccEEEEcCCCCccchHHHhhccCCCCcEEEEEEeCCccCCCCCCCCCCCcceE
Q 006908 169 PRAPYEVKAWISAKTGDGKLILSHREGEPYFFTFGKSEVPKGLEMGIGTMTREEKAVIYVTSQYLTPSPLMPVVEGCEEV 248 (626)
Q Consensus 169 ~~~g~~V~v~y~~~~~~g~~~~s~~~~~p~~~~~g~g~~~~gle~~l~~mk~Ge~~~~~v~~~~~~g~~~~~~ip~~~~l 248 (626)
++.||.|++||+++ .+|++|+|+. +.|.+|.|+++|||+++|.+|++|++++|.|||+.+|| +.+..+
T Consensus 3 i~~gd~V~v~Y~g~-~dG~~fdss~----~~f~~G~g~vipG~e~aL~Gm~~Ge~~~v~ipp~~aYG-------~~~~~l 70 (158)
T 3cgm_A 3 VGQDKVVTIRYTLQ-VEGEVLDQGE----LSYLHGHRNLIPGLEEALEGREEGEAFQAHVPAEKAYG-------PHDPEG 70 (158)
T ss_dssp CCTTEEEEEEEEEE-ETTEEEEEEE----EEEETTSSSSCHHHHHHHTTCBTTCEEEEEECGGGTTC-------CCCGGG
T ss_pred CCCCCEEEEEEEEE-ECCEEEEeeE----EEEEECCCCcChHHHHHHcCCCCCCEEEEEECcHHHcC-------CCCcce
Confidence 56899999999999 9999999886 99999999999999999999999999999999999999 445677
Q ss_pred EEEEEEeeEE
Q 006908 249 HFEVELVHLI 258 (626)
Q Consensus 249 ~~~v~l~~~~ 258 (626)
++.|.+..|.
T Consensus 71 v~~v~~~~f~ 80 (158)
T 3cgm_A 71 VQVVPLSAFP 80 (158)
T ss_dssp EEEEEGGGSC
T ss_pred EEEEEHHHCC
Confidence 8888888873
No 103
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.32 E-value=1.8e-11 Score=118.93 Aligned_cols=101 Identities=15% Similarity=0.266 Sum_probs=94.5
Q ss_pred HHHHhhhchhhccccHHHHHHHHHHHHHhcccCCC-CChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 006908 399 EKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNP-QDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 477 (626)
Q Consensus 399 ~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p-~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~d 477 (626)
..+...|..++..|+|++|+..|++++. +.| .+ ..+++++|.|+.++++|.+|+.++.+++.++
T Consensus 8 ~~~~~~g~~~~~~~~~~~A~~~~~~al~----~~~~~~-----------~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~ 72 (228)
T 4i17_A 8 NQLKNEGNDALNAKNYAVAFEKYSEYLK----LTNNQD-----------SVTAYNCGVCADNIKKYKEAADYFDIAIKKN 72 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH----HTTTCC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHh----ccCCCC-----------cHHHHHHHHHHHHhhcHHHHHHHHHHHHHhC
Confidence 6788899999999999999999999999 454 43 3578889999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC
Q 006908 478 PAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSS 514 (626)
Q Consensus 478 p~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~ 514 (626)
|.++.+++++|.++..+|++++|+..|+++++++|++
T Consensus 73 p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~ 109 (228)
T 4i17_A 73 YNLANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGN 109 (228)
T ss_dssp CSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred cchHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCc
Confidence 9999999999999999999999999999999999997
No 104
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.31 E-value=9.4e-12 Score=135.94 Aligned_cols=117 Identities=26% Similarity=0.457 Sum_probs=106.3
Q ss_pred HHHHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 006908 395 MDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVL 474 (626)
Q Consensus 395 ~~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL 474 (626)
.+.+..+...|+.++++|+|++|+..|++|+. +.|.+ ..+++|+|.||+++++|++|+.++.+|+
T Consensus 3 ~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~----~~p~~-----------~~~~~~lg~~~~~~g~~~~A~~~~~~al 67 (477)
T 1wao_1 3 LKRAEELKTQANDYFKAKDYENAIKFYSQAIE----LNPSN-----------AIYYGNRSLAYLRTECYGYALGDATRAI 67 (477)
T ss_dssp HHHHTTSSSSSSSTTTTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH----hCCcc-----------HHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 45677888999999999999999999999999 56655 5689999999999999999999999999
Q ss_pred HhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Q 006908 475 DANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKK 527 (626)
Q Consensus 475 ~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~ 527 (626)
+++|.++.+++++|.+|..+|++++|++.|++|++++|++ ..+...+..+..
T Consensus 68 ~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~-~~~~~~l~~~~~ 119 (477)
T 1wao_1 68 ELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHD-KDAKMKYQECNK 119 (477)
T ss_dssp HSCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTC-TTHHHHHHHHHH
T ss_pred HhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999997 567777766643
No 105
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.29 E-value=1.1e-11 Score=131.24 Aligned_cols=80 Identities=8% Similarity=0.056 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Q 006908 448 LLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKK 527 (626)
Q Consensus 448 ~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~ 527 (626)
.+|+|+|.++.++|+|.+|+.+|.++|+++|+++.+|+++|.++..+|++++|+.+|++|++++|++ ..++..+..+..
T Consensus 167 ~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~P~~-~~a~~~lg~~l~ 245 (382)
T 2h6f_A 167 QVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRN-NSVWNQRYFVIS 245 (382)
T ss_dssp HHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTC-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC-HHHHHHHHHHHH
Confidence 4566666666666666666666666666666666666666666666666666666666666666665 455555555544
Q ss_pred H
Q 006908 528 Q 528 (626)
Q Consensus 528 ~ 528 (626)
.
T Consensus 246 ~ 246 (382)
T 2h6f_A 246 N 246 (382)
T ss_dssp H
T ss_pred H
Confidence 3
No 106
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.29 E-value=4.4e-12 Score=110.16 Aligned_cols=97 Identities=19% Similarity=0.149 Sum_probs=81.9
Q ss_pred ccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 006908 410 KEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGM 489 (626)
Q Consensus 410 ~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~~~ka~~~~g~ 489 (626)
..|+|++|+..|++++. +.+.+ +....+++++|.||+++|+|.+|+..+.++++++|+++.+++++|.
T Consensus 2 ~~g~~~~A~~~~~~al~----~~~~~--------p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~ 69 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIA----SGLQG--------KDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAM 69 (117)
T ss_dssp -----CCCHHHHHHHHS----SCCCH--------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHH----cCCCC--------ccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHH
Confidence 36889999999999998 43221 1235689999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHhcCCCCHHHHH
Q 006908 490 AYMALGEFEEAQRDFEMMMKVDKSSEPDAT 519 (626)
Q Consensus 490 a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~ 519 (626)
++..+|++++|+..|++++.++|++ +.+.
T Consensus 70 ~~~~~g~~~~A~~~~~~al~~~p~~-~~~~ 98 (117)
T 3k9i_A 70 VLYNLGRYEQGVELLLKIIAETSDD-ETIQ 98 (117)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHCCC-HHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCc-HHHH
Confidence 9999999999999999999999997 4443
No 107
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.28 E-value=1.2e-11 Score=130.92 Aligned_cols=119 Identities=9% Similarity=0.021 Sum_probs=105.6
Q ss_pred HHHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCC-HHHHHHHHHHHH
Q 006908 396 DEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGE-CRKSIEACNKVL 474 (626)
Q Consensus 396 ~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~-~~~A~~~~~~aL 474 (626)
..+..+...|..+++.|+|++|+..|++||. ++|.+ ..+|+|+|.++..+|+ |.+|+.+|.++|
T Consensus 95 ~~~~a~~~lg~~~~~~g~~~~Al~~~~~al~----l~P~~-----------~~a~~~~g~~l~~~g~d~~eAl~~~~~al 159 (382)
T 2h6f_A 95 KFRDVYDYFRAVLQRDERSERAFKLTRDAIE----LNAAN-----------YTVWHFRRVLLKSLQKDLHEEMNYITAII 159 (382)
T ss_dssp HHHHHHHHHHHHHHHTCCCHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHCCChHHHHHHHHHHHH----hCccC-----------HHHHHHHHHHHHHcccCHHHHHHHHHHHH
Confidence 3567788899999999999999999999999 67776 5689999999999997 999999999999
Q ss_pred HhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 006908 475 DANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQ 530 (626)
Q Consensus 475 ~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~~~~ 530 (626)
+++|+++.+|+++|.++..+|++++|+.+|++|++++|+| ..++..+..+...+.
T Consensus 160 ~l~P~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~-~~a~~~lg~~~~~~g 214 (382)
T 2h6f_A 160 EEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKN-YHAWQHRQWVIQEFK 214 (382)
T ss_dssp HHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTC-HHHHHHHHHHHHHHT
T ss_pred HHCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccC-HHHHHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999998 677777777665544
No 108
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.28 E-value=3.6e-11 Score=115.82 Aligned_cols=108 Identities=16% Similarity=0.192 Sum_probs=93.0
Q ss_pred hhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q 006908 403 VTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVK 482 (626)
Q Consensus 403 ~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~~~k 482 (626)
..|..+++.|+|++|+..|++++. +.|.+ ..+++++|.++..+|+|++|+.+|.++++++|+++.
T Consensus 59 ~lg~~~~~~g~~~~A~~~~~~al~----~~p~~-----------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~ 123 (208)
T 3urz_A 59 ELALAYKKNRNYDKAYLFYKELLQ----KAPNN-----------VDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLA 123 (208)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHH----HCCCC-----------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHH
Confidence 489999999999999999999999 67776 458999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH-----------------------------------cCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Q 006908 483 GLYRRGMAYMA-----------------------------------LGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKK 527 (626)
Q Consensus 483 a~~~~g~a~~~-----------------------------------lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~ 527 (626)
+|+++|.+|+. +|+|++|+.+|++|++++|++ .+...|.++..
T Consensus 124 a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~--~~~~~l~~i~~ 201 (208)
T 3urz_A 124 ANIFLGNYYYLTAEQEKKKLETDYKKLSSPTKMQYARYRDGLSKLFTTRYEKARNSLQKVILRFPST--EAQKTLDKILR 201 (208)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSCCH--HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCH--HHHHHHHHHHH
Confidence 88888877643 356889999999999999974 45556666543
No 109
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.28 E-value=1.1e-10 Score=100.43 Aligned_cols=113 Identities=27% Similarity=0.490 Sum_probs=101.0
Q ss_pred HHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 006908 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 477 (626)
Q Consensus 398 a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~d 477 (626)
+..+...|..++..|+|++|+..|.+++. ..|.+ ..+++++|.++.+++++.+|+..+.+++.++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~----~~~~~-----------~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~ 73 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALE----LDPNN-----------AEAWYNLGNAYYKQGDYDEAIEYYQKALELD 73 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH----HCcCc-----------HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 56677889999999999999999999998 34444 3578999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 006908 478 PAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLK 526 (626)
Q Consensus 478 p~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~ 526 (626)
|.+..+++.+|.++..+|++++|+..|++++.++|++ ..+...+..+.
T Consensus 74 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~-~~~~~~l~~~~ 121 (125)
T 1na0_A 74 PNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN-AEAKQNLGNAK 121 (125)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc-HHHHHHHHHHH
Confidence 9999999999999999999999999999999999997 56666666554
No 110
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.27 E-value=5.3e-11 Score=115.41 Aligned_cols=121 Identities=17% Similarity=0.239 Sum_probs=105.6
Q ss_pred HHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHc-----------CCHHHH
Q 006908 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKL-----------GECRKS 466 (626)
Q Consensus 398 a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl-----------~~~~~A 466 (626)
+..+...|..+++.|++++|+..|++++. +.|.+ ..+++++|.++.++ |++.+|
T Consensus 39 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~----~~P~~-----------~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A 103 (217)
T 2pl2_A 39 PEALYWLARTQLKLGLVNPALENGKTLVA----RTPRY-----------LGGYMVLSEAYVALYRQAEDRERGKGYLEQA 103 (217)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHHHHTCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCCc-----------HHHHHHHHHHHHHhhhhhhhhcccccCHHHH
Confidence 45677899999999999999999999999 67776 45889999999999 999999
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 006908 467 IEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQEVESK 535 (626)
Q Consensus 467 ~~~~~~aL~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~~~~~~~~~ 535 (626)
+..+.++++++|+++.+++++|.++..+|++++|+..|++|++++ ++ ..+...+..+.....+..+.
T Consensus 104 ~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~-~~~~~~la~~~~~~g~~~~A 170 (217)
T 2pl2_A 104 LSVLKDAERVNPRYAPLHLQRGLVYALLGERDKAEASLKQALALE-DT-PEIRSALAELYLSMGRLDEA 170 (217)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CC-HHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHhCcccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-cc-hHHHHHHHHHHHHcCCHHHH
Confidence 999999999999999999999999999999999999999999999 65 67888888776666555444
No 111
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.26 E-value=8.5e-11 Score=109.96 Aligned_cols=134 Identities=17% Similarity=0.257 Sum_probs=98.0
Q ss_pred HHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHH-----------------------HHhhhhhHHHHHHH
Q 006908 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGK-----------------------VFVGKRNLLHLNVA 454 (626)
Q Consensus 398 a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~-----------------------~~~~~~~~~~~Nla 454 (626)
+..+.+.|+.++++|+|++|+..|++|+. +.|.+.+-.. ........++.++|
T Consensus 5 ~~iy~~lG~~~~~~g~~~~A~~~~~~al~----~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 80 (184)
T 3vtx_A 5 TTIYMDIGDKKRTKGDFDGAIRAYKKVLK----ADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILG 80 (184)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHH
Confidence 55678899999999999999999999998 5676642110 01112234566777
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Q 006908 455 ACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQEVES 534 (626)
Q Consensus 455 ~~~~kl~~~~~A~~~~~~aL~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~~~~~~~~ 534 (626)
.++...+++..|+..+.+++.++|.+..+++.+|.++..+|++++|+..|+++++++|.+ ..+...+..+.....+..+
T Consensus 81 ~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~-~~~~~~lg~~~~~~g~~~~ 159 (184)
T 3vtx_A 81 SANFMIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGF-IRAYQSIGLAYEGKGLRDE 159 (184)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchh-hhHHHHHHHHHHHCCCHHH
Confidence 777777777777777777777788888888888888888888888888888888888876 5677777777666555444
Q ss_pred HH
Q 006908 535 KA 536 (626)
Q Consensus 535 ~~ 536 (626)
..
T Consensus 160 A~ 161 (184)
T 3vtx_A 160 AV 161 (184)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 112
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.25 E-value=4e-11 Score=101.43 Aligned_cols=100 Identities=14% Similarity=0.193 Sum_probs=92.2
Q ss_pred HHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 006908 400 KIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANPA 479 (626)
Q Consensus 400 ~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~ 479 (626)
.+...|..++..|+|++|+..|++++. ..|.+ ..++.++|.+++.+++|++|+..+.++++++|.
T Consensus 8 ~~~~~~~~~~~~~~~~~A~~~~~~a~~----~~~~~-----------~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~ 72 (112)
T 2kck_A 8 EYYLEGVLQYDAGNYTESIDLFEKAIQ----LDPEE-----------SKYWLMKGKALYNLERYEEAVDCYNYVINVIED 72 (112)
T ss_dssp GGGGHHHHHHSSCCHHHHHHHHHHHHH----HCCCC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHH----hCcCC-----------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcc
Confidence 356788999999999999999999999 45554 357899999999999999999999999999999
Q ss_pred --CHHHHHHHHHHHHHc-CCHHHHHHHHHHHHhcCCCC
Q 006908 480 --HVKGLYRRGMAYMAL-GEFEEAQRDFEMMMKVDKSS 514 (626)
Q Consensus 480 --~~ka~~~~g~a~~~l-g~~~eA~~~~~kAl~l~P~~ 514 (626)
+..+++++|.++..+ |++++|++.|++++...|++
T Consensus 73 ~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~p~~ 110 (112)
T 2kck_A 73 EYNKDVWAAKADALRYIEGKEVEAEIAEARAKLEHHHH 110 (112)
T ss_dssp TTCHHHHHHHHHHHTTCSSCSHHHHHHHHHHGGGCCCC
T ss_pred cchHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhcccCC
Confidence 999999999999999 99999999999999999975
No 113
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.21 E-value=1.5e-10 Score=107.78 Aligned_cols=113 Identities=11% Similarity=0.200 Sum_probs=98.7
Q ss_pred HHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHH-HHHcCCH--HHHHHHHHHHH
Q 006908 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAAC-LLKLGEC--RKSIEACNKVL 474 (626)
Q Consensus 398 a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~-~~kl~~~--~~A~~~~~~aL 474 (626)
+..+...|..++..|+|++|+..|.+++. +.|.+ ..++.++|.+ ++..+++ .+|+..+.+++
T Consensus 44 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~----~~p~~-----------~~~~~~la~~l~~~~~~~~~~~A~~~~~~al 108 (177)
T 2e2e_A 44 SEQWALLGEYYLWQNDYSNSLLAYRQALQ----LRGEN-----------AELYAALATVLYYQASQHMTAQTRAMIDKAL 108 (177)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HHCSC-----------HHHHHHHHHHHHHHTTTCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH----cCCCC-----------HHHHHHHHHHHHHhcCCcchHHHHHHHHHHH
Confidence 45677899999999999999999999999 45554 4588999999 8899999 99999999999
Q ss_pred HhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 006908 475 DANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLK 526 (626)
Q Consensus 475 ~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~ 526 (626)
.++|.+..+++.+|.++..+|++++|+..|+++++++|++ ......+..+.
T Consensus 109 ~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~~~~i~ 159 (177)
T 2e2e_A 109 ALDSNEITALMLLASDAFMQANYAQAIELWQKVMDLNSPR-INRTQLVESIN 159 (177)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTT-SCHHHHHHHHH
T ss_pred HhCCCcHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCC-ccHHHHHHHHH
Confidence 9999999999999999999999999999999999999987 34444444443
No 114
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.21 E-value=1.1e-10 Score=111.61 Aligned_cols=132 Identities=13% Similarity=0.184 Sum_probs=108.9
Q ss_pred HHHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 006908 396 DEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLD 475 (626)
Q Consensus 396 ~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~ 475 (626)
..+..+...|+.++..|+|++|+..|++++. + + ..+++|+|.|+.++|+|.+|+..|.+++.
T Consensus 4 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~------~-~-----------~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 65 (213)
T 1hh8_A 4 VEAISLWNEGVLAADKKDWKGALDAFSAVQD------P-H-----------SRICFNIGCMYTILKNMTEAEKAFTRSIN 65 (213)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHTSSS------C-C-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHcC------C-C-----------hHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4566778999999999999999999998853 1 1 35899999999999999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCH---------------HHHHHHHHHHHHHHHHHHHHHHHHH
Q 006908 476 ANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSE---------------PDATAALSKLKKQRQEVESKARKQF 540 (626)
Q Consensus 476 ~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~---------------~~~~~~l~~l~~~~~~~~~~~~~~~ 540 (626)
++|.++.+++++|.++..+|++++|+..|++++++.|.+. ..+...+..+.....+..+.. ..+
T Consensus 66 ~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~-~~~ 144 (213)
T 1hh8_A 66 RDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAE-EQL 144 (213)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHH-HHH
T ss_pred hCccchHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHH-HHH
Confidence 9999999999999999999999999999999999988752 256777777765555444433 344
Q ss_pred HccccC
Q 006908 541 KGLFDK 546 (626)
Q Consensus 541 ~~~~~~ 546 (626)
.+....
T Consensus 145 ~~al~~ 150 (213)
T 1hh8_A 145 ALATSM 150 (213)
T ss_dssp HHHHTT
T ss_pred HHHHHc
Confidence 444443
No 115
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.20 E-value=1.5e-10 Score=112.41 Aligned_cols=114 Identities=15% Similarity=0.162 Sum_probs=101.2
Q ss_pred HHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 006908 400 KIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANPA 479 (626)
Q Consensus 400 ~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~ 479 (626)
.+...|..++..|+|++|+..|++++. ..|.+ ..++.++|.||.++|+|.+|+..+.++++++|+
T Consensus 44 ~~~~~~~~~~~~~~~~~A~~~~~~al~----~~p~~-----------~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~ 108 (228)
T 4i17_A 44 TAYNCGVCADNIKKYKEAADYFDIAIK----KNYNL-----------ANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPG 108 (228)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH----TTCSH-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHhhcHHHHHHHHHHHHH----hCcch-----------HHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCC
Confidence 455689999999999999999999998 66654 468999999999999999999999999999999
Q ss_pred CH-------HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC--CHHHHHHHHHHHHHHH
Q 006908 480 HV-------KGLYRRGMAYMALGEFEEAQRDFEMMMKVDKS--SEPDATAALSKLKKQR 529 (626)
Q Consensus 480 ~~-------ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~--~~~~~~~~l~~l~~~~ 529 (626)
+. .+|+++|.++..+|++++|+..|++|++++|+ + ..+...+..+....
T Consensus 109 ~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~-~~~~~~l~~~~~~~ 166 (228)
T 4i17_A 109 NATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDVTSKKWK-TDALYSLGVLFYNN 166 (228)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSSCHHHH-HHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhcCCCccc-HHHHHHHHHHHHHH
Confidence 98 77999999999999999999999999999998 6 56777777665433
No 116
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.18 E-value=3.1e-10 Score=116.67 Aligned_cols=122 Identities=22% Similarity=0.401 Sum_probs=106.5
Q ss_pred HHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 006908 399 EKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANP 478 (626)
Q Consensus 399 ~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp 478 (626)
......|..+++.|+|++|+..|++++. ..|.+. .....++.++|.|+.++|++.+|+..+.++++++|
T Consensus 235 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~----~~~~~~-------~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~ 303 (359)
T 3ieg_A 235 NKLIESAEELIRDGRYTDATSKYESVMK----TEPSVA-------EYTVRSKERICHCFSKDEKPVEAIRICSEVLQMEP 303 (359)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCCSSH-------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHh----cCCCch-------HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCc
Confidence 3445669999999999999999999999 455542 22345788999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 006908 479 AHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQEV 532 (626)
Q Consensus 479 ~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~~~~~~ 532 (626)
+++.+++++|.++..+|++++|+..|++|++++|++ ..++..|..+...+++.
T Consensus 304 ~~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~~p~~-~~~~~~l~~~~~~~~~~ 356 (359)
T 3ieg_A 304 DNVNALKDRAEAYLIEEMYDEAIQDYEAAQEHNEND-QQIREGLEKAQRLLKQS 356 (359)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTC-HHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC-hHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999998 67888888887766543
No 117
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.18 E-value=4.9e-10 Score=104.71 Aligned_cols=112 Identities=19% Similarity=0.229 Sum_probs=85.9
Q ss_pred HHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHH-----------------------HHHhhhhhHHHHHHHH
Q 006908 399 EKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEG-----------------------KVFVGKRNLLHLNVAA 455 (626)
Q Consensus 399 ~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~-----------------------~~~~~~~~~~~~Nla~ 455 (626)
..+...|..+++.|++++|+..|.+++. ..|.+..-. ....+....++.++|.
T Consensus 40 ~~~~~la~~~~~~~~~~~a~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~ 115 (184)
T 3vtx_A 40 ETLLKLGKTYMDIGLPNDAIESLKKFVV----LDTTSAEAYYILGSANFMIDEKQAAIDALQRAIALNTVYADAYYKLGL 115 (184)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHh----cCchhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHH
Confidence 3455566666666666666666666665 222221100 0011222457899999
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC
Q 006908 456 CLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSS 514 (626)
Q Consensus 456 ~~~kl~~~~~A~~~~~~aL~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~ 514 (626)
++.++|+|++|+..+.++++++|.++.+|+++|.+|..+|++++|+..|++|++++|++
T Consensus 116 ~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 174 (184)
T 3vtx_A 116 VYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGLRDEAVKYFKKALEKEEKK 174 (184)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTHHH
T ss_pred HHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCCHHHHHHHHHHHHhCCccC
Confidence 99999999999999999999999999999999999999999999999999999999874
No 118
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.17 E-value=2.1e-10 Score=101.24 Aligned_cols=90 Identities=14% Similarity=0.131 Sum_probs=81.5
Q ss_pred hhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q 006908 446 RNLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKL 525 (626)
Q Consensus 446 ~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l 525 (626)
.+..+.|+|.++++.|+|.+|+..|+++|+++|.++.+|+++|.++..+|++++|+.+|++|++++|++ ..+...+..+
T Consensus 12 ~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~-~~a~~~lg~~ 90 (126)
T 4gco_A 12 LAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKF-IKGYIRKAAC 90 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhh-hHHHHHHHHH
Confidence 356899999999999999999999999999999999999999999999999999999999999999998 6788888888
Q ss_pred HHHHHHHHHHH
Q 006908 526 KKQRQEVESKA 536 (626)
Q Consensus 526 ~~~~~~~~~~~ 536 (626)
...+.+..+..
T Consensus 91 ~~~~~~~~~A~ 101 (126)
T 4gco_A 91 LVAMREWSKAQ 101 (126)
T ss_dssp HHHTTCHHHHH
T ss_pred HHHCCCHHHHH
Confidence 77666555444
No 119
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.17 E-value=2.3e-11 Score=111.34 Aligned_cols=89 Identities=8% Similarity=-0.043 Sum_probs=81.4
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 006908 447 NLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLK 526 (626)
Q Consensus 447 ~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~ 526 (626)
...++++|.+++++|+|++|+..|.+++.++|.++.+|+++|.++..+|+|++|+..|++|++++|++ +.+...+..+.
T Consensus 36 ~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~-~~~~~~lg~~~ 114 (151)
T 3gyz_A 36 MDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKND-YTPVFHTGQCQ 114 (151)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSC-CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCC-cHHHHHHHHHH
Confidence 45889999999999999999999999999999999999999999999999999999999999999998 67888888887
Q ss_pred HHHHHHHHHH
Q 006908 527 KQRQEVESKA 536 (626)
Q Consensus 527 ~~~~~~~~~~ 536 (626)
..+.+..+..
T Consensus 115 ~~lg~~~eA~ 124 (151)
T 3gyz_A 115 LRLKAPLKAK 124 (151)
T ss_dssp HHTTCHHHHH
T ss_pred HHcCCHHHHH
Confidence 7766655544
No 120
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.14 E-value=2.1e-11 Score=103.69 Aligned_cols=95 Identities=29% Similarity=0.427 Sum_probs=77.3
Q ss_pred HHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 006908 397 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA 476 (626)
Q Consensus 397 ~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~ 476 (626)
.+..+...|..++..|+|++|+..|++++. +.|.+ ..+++|+|.|++++|+|.+|+.+|.+++++
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~----~~p~~-----------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 67 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLIT----AQPQN-----------PVGYSNKAMALIKLGEYTQAIQMCQQGLRY 67 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHTS
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHh----cCCCC-----------HHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 356677888888888888888888888888 45554 357888888888888888888888888888
Q ss_pred CCCC------HHHHHHHHHHHHHcCCHHHHHHHHHH
Q 006908 477 NPAH------VKGLYRRGMAYMALGEFEEAQRDFEM 506 (626)
Q Consensus 477 dp~~------~ka~~~~g~a~~~lg~~~eA~~~~~k 506 (626)
+|++ ..+++++|.++..+|++++|+..|++
T Consensus 68 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 103 (111)
T 2l6j_A 68 TSTAEHVAIRSKLQYRLELAQGAVGSVQIPVVEVDE 103 (111)
T ss_dssp CSSTTSHHHHHHHHHHHHHHHHHHHCCCCCSSSSSS
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHHhHhhhHhHHHH
Confidence 8888 88888888888888888777766554
No 121
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.14 E-value=3e-10 Score=108.70 Aligned_cols=102 Identities=9% Similarity=0.094 Sum_probs=94.0
Q ss_pred HHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 006908 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 477 (626)
Q Consensus 398 a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~d 477 (626)
+..+...|..+++.|+|++|+..|.+++. +.|.+ ..+++|+|.|++++|+|.+|+.++.+++++.
T Consensus 37 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~----~~~~~-----------~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~ 101 (213)
T 1hh8_A 37 SRICFNIGCMYTILKNMTEAEKAFTRSIN----RDKHL-----------AVAYFQRGMLYYQTEKYDLAIKDLKEALIQL 101 (213)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCccc-----------hHHHHHHHHHHHHcccHHHHHHHHHHHHHhC
Confidence 45778899999999999999999999999 45554 4589999999999999999999999999988
Q ss_pred CCCH----------------HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC
Q 006908 478 PAHV----------------KGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSS 514 (626)
Q Consensus 478 p~~~----------------ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~ 514 (626)
|.+. .+++++|.++..+|++++|+..|++|++++|++
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~ 154 (213)
T 1hh8_A 102 RGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEP 154 (213)
T ss_dssp TTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSG
T ss_pred CCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCccc
Confidence 8876 999999999999999999999999999999975
No 122
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.13 E-value=4e-10 Score=110.31 Aligned_cols=111 Identities=26% Similarity=0.410 Sum_probs=81.4
Q ss_pred HHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 006908 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 477 (626)
Q Consensus 398 a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~d 477 (626)
+..+...|..++..|+|++|+..|++++. ..|.+ ..+++++|.|+.++|+|.+|+..+.++++++
T Consensus 139 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~----~~~~~-----------~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~ 203 (258)
T 3uq3_A 139 AEEARLEGKEYFTKSDWPNAVKAYTEMIK----RAPED-----------ARGYSNRAAALAKLMSFPEAIADCNKAIEKD 203 (258)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHh----cCccc-----------HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 44566777777777888888888888777 34443 3467778888888888888888888888888
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC------CCCHHHHHHHHHH
Q 006908 478 PAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVD------KSSEPDATAALSK 524 (626)
Q Consensus 478 p~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~------P~~~~~~~~~l~~ 524 (626)
|+++.+++++|.++..+|++++|+..|+++++++ |++ ..+...|..
T Consensus 204 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~p~~-~~~~~~l~~ 255 (258)
T 3uq3_A 204 PNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSA-REIDQLYYK 255 (258)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTH-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhChhhcCCCch-HHHHHHHHH
Confidence 8888888888888888888888888888888877 664 445544443
No 123
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.12 E-value=5.3e-10 Score=121.42 Aligned_cols=116 Identities=25% Similarity=0.395 Sum_probs=103.3
Q ss_pred HHHHHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 006908 394 IMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKV 473 (626)
Q Consensus 394 ~~~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~a 473 (626)
+.+.+..+...|+.+++.|+|.+|+..|++++. ..| + ..++.++|.|++++|+|.+|+..|.++
T Consensus 2 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~----~~p-~-----------~~~~~~la~~~~~~g~~~~A~~~~~~a 65 (514)
T 2gw1_A 2 KDKYALALKDKGNQFFRNKKYDDAIKYYNWALE----LKE-D-----------PVFYSNLSACYVSVGDLKKVVEMSTKA 65 (514)
T ss_dssp HHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHH----HCC-C-----------HHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHhccHHHHHHHHHHHHh----cCc-c-----------HHHHHhHHHHHHHHhhHHHHHHHHHHH
Confidence 457889999999999999999999999999999 444 2 358999999999999999999999999
Q ss_pred HHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q 006908 474 LDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKL 525 (626)
Q Consensus 474 L~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l 525 (626)
++++|+++.+++++|.++..+|++++|+..|++++.++|.+.......+..+
T Consensus 66 l~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (514)
T 2gw1_A 66 LELKPDYSKVLLRRASANEGLGKFADAMFDLSVLSLNGDFNDASIEPMLERN 117 (514)
T ss_dssp HHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSCCGGGTHHHHHHH
T ss_pred hccChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCccchHHHHHHHH
Confidence 9999999999999999999999999999999999999997654444444443
No 124
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.11 E-value=5.4e-10 Score=121.86 Aligned_cols=120 Identities=11% Similarity=0.060 Sum_probs=106.7
Q ss_pred HHHHhhhchhhcc---------ccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHc--------C
Q 006908 399 EKIRVTGNRLFKE---------GKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKL--------G 461 (626)
Q Consensus 399 ~~~k~~Gn~~f~~---------g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl--------~ 461 (626)
..+...|..++.. |+|++|+..|++|+. +.|.+ ..+|+++|.+|..+ +
T Consensus 171 ~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~----~~p~~-----------~~~~~~lg~~~~~~~~~~~~~~g 235 (474)
T 4abn_A 171 VSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQ----MDVLD-----------GRSWYILGNAYLSLYFNTGQNPK 235 (474)
T ss_dssp HHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHHHHHTTCCHH
T ss_pred HHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHH----hCCCC-----------HHHHHHHHHHHHHHHHhhccccc
Confidence 4566788888888 999999999999999 56666 45899999999999 9
Q ss_pred CHHHHHHHHHHHHHhCC---CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Q 006908 462 ECRKSIEACNKVLDANP---AHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQEVES 534 (626)
Q Consensus 462 ~~~~A~~~~~~aL~~dp---~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~~~~~~~~ 534 (626)
+|++|+.+|.++++++| .++.+|+++|.+|..+|++++|+..|++|++++|++ ..++..+..+...+.+..+
T Consensus 236 ~~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~-~~a~~~l~~~~~~lg~~~e 310 (474)
T 4abn_A 236 ISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAW-PEPQQREQQLLEFLSRLTS 310 (474)
T ss_dssp HHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999 999999999999999999999999999999999998 6777777777666665443
No 125
>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5
Probab=99.11 E-value=1.3e-10 Score=124.30 Aligned_cols=87 Identities=18% Similarity=0.295 Sum_probs=78.9
Q ss_pred CCCCCEEEEEEEEEEcCCcEEEeeccCCCCCCcceEEEeCCCccchhHHhhcCCCCCCcEEEEEeeccccccCCCCCCCC
Q 006908 45 PSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTMLKGEVSMFKMKPQMHYGEDDCPVAA 124 (626)
Q Consensus 45 p~~gd~V~v~y~~~~~dG~~~~st~~~~~~~~~p~~~~lg~~~~~~gle~~l~~m~~Ge~~~~~ip~~~~~g~~~~~~~~ 124 (626)
++.||.|++||+++ .||+.|++++ +.|+.|.+|.|+++|||+++|.||++|++++|.||+..+||..+.
T Consensus 158 ~~~gD~V~i~y~g~-~dG~~fd~~~------~~~~~~~lG~g~~ipgfee~L~G~k~Ge~~~v~v~~~~~yg~~~l---- 226 (432)
T 1w26_A 158 VEAEDRVTIDFTGS-VDGEEFEGGK------ASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENL---- 226 (432)
T ss_dssp CCTTCEEEECEEEE-SSSCBCSSCC------CSSEEEETTSCCSCTTHHHHSSSCCSSCEEEEEEECCTTCSCTTT----
T ss_pred CCCCCEEEEEEEEe-eCCeEccCCC------ccceEEEeCCCCcchHHHHHhCCCCCCCEEEEEECCchhhCCCCC----
Confidence 78999999999999 5999998775 468999999999999999999999999999999999999997665
Q ss_pred CCCCCCCceEEEEEEeeeecccc
Q 006908 125 PSTFPKDEELHFEIEMIDFAKAK 147 (626)
Q Consensus 125 ~~~i~~~~~lv~~v~l~~~~~~~ 147 (626)
+|++++|+|+|+++....
T Consensus 227 -----ag~~~~F~V~v~~v~~~~ 244 (432)
T 1w26_A 227 -----KGKAAKFAINLKKVEERE 244 (432)
T ss_dssp -----SSCEEEEEEECCEECCEE
T ss_pred -----CCceEEEEEEEEEEeccC
Confidence 479999999999997543
No 126
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.10 E-value=1.4e-09 Score=107.66 Aligned_cols=105 Identities=21% Similarity=0.241 Sum_probs=97.7
Q ss_pred HHHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 006908 396 DEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLD 475 (626)
Q Consensus 396 ~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~ 475 (626)
..+..+...|..++..|+|++|+..|++++. ..|.+ ..++.++|.++..+|+|.+|+..+.+++.
T Consensus 41 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~----~~~~~-----------~~~~~~la~~~~~~~~~~~A~~~~~~al~ 105 (275)
T 1xnf_A 41 ERAQLLYERGVLYDSLGLRALARNDFSQALA----IRPDM-----------PEVFNYLGIYLTQAGNFDAAYEAFDSVLE 105 (275)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCCCC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcccHHHHHHHHHHHHH----cCCCc-----------HHHHHHHHHHHHHccCHHHHHHHHHHHHh
Confidence 4577888999999999999999999999999 55655 45899999999999999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCH
Q 006908 476 ANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSE 515 (626)
Q Consensus 476 ~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~ 515 (626)
++|.++.+++.+|.++..+|++++|+..|+++++++|++.
T Consensus 106 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~ 145 (275)
T 1xnf_A 106 LDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDP 145 (275)
T ss_dssp HCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred cCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCh
Confidence 9999999999999999999999999999999999999973
No 127
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.09 E-value=9.9e-10 Score=122.36 Aligned_cols=116 Identities=14% Similarity=0.090 Sum_probs=106.0
Q ss_pred HHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 006908 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 477 (626)
Q Consensus 398 a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~d 477 (626)
+..+...|..++..|+|++|+..|++|+. +.|.+ ..+++++|.+|..+|+|++|+..+.++++++
T Consensus 23 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~----~~p~~-----------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 87 (568)
T 2vsy_A 23 FVAWLMLADAELGMGDTTAGEMAVQRGLA----LHPGH-----------PEAVARLGRVRWTQQRHAEAAVLLQQASDAA 87 (568)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHT----TSTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCCC-----------HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcC
Confidence 56678899999999999999999999999 66665 4589999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q 006908 478 PAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQR 529 (626)
Q Consensus 478 p~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~~~ 529 (626)
|+++.+++++|.+|..+|++++|++.|++|++++|++ ..+...+..+....
T Consensus 88 p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~l~~~~~~~ 138 (568)
T 2vsy_A 88 PEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEE-PYITAQLLNWRRRL 138 (568)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999997 67777777776665
No 128
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.08 E-value=1.3e-09 Score=94.60 Aligned_cols=115 Identities=24% Similarity=0.425 Sum_probs=99.2
Q ss_pred HHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 006908 400 KIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANPA 479 (626)
Q Consensus 400 ~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~ 479 (626)
.+...|..++..|++++|+..|.+++. ..|.+ ..++.++|.++...+++.+|+..+.+++..+|.
T Consensus 3 ~~~~l~~~~~~~~~~~~A~~~~~~~~~----~~~~~-----------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~ 67 (136)
T 2fo7_A 3 AWYNLGNAYYKQGDYDEAIEYYQKALE----LDPRS-----------AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPR 67 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHcCcHHHHHHHHHHHHH----cCCcc-----------hhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCC
Confidence 456788899999999999999999998 34444 357889999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 006908 480 HVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQ 530 (626)
Q Consensus 480 ~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~~~~ 530 (626)
+..+++.+|.++...|++++|+..|++++.+.|.+ ..+...+..+.....
T Consensus 68 ~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~-~~~~~~la~~~~~~~ 117 (136)
T 2fo7_A 68 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRS-AEAWYNLGNAYYKQG 117 (136)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHTTT
T ss_pred chHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC-hHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999987 556666665544433
No 129
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.08 E-value=2e-09 Score=92.63 Aligned_cols=83 Identities=14% Similarity=0.195 Sum_probs=77.6
Q ss_pred HHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Q 006908 416 LAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALG 495 (626)
Q Consensus 416 ~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~~~ka~~~~g~a~~~lg 495 (626)
.|+..|++++. ..|.+ ..+++++|.+++.+|+|.+|+..|.+++.++|.++.+|+++|.++..+|
T Consensus 3 ~a~~~~~~al~----~~p~~-----------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g 67 (115)
T 2kat_A 3 AITERLEAMLA----QGTDN-----------MLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQG 67 (115)
T ss_dssp CHHHHHHHHHT----TTCCC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHH----hCCCc-----------HHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcC
Confidence 58889999998 67766 4589999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhcCCC
Q 006908 496 EFEEAQRDFEMMMKVDKS 513 (626)
Q Consensus 496 ~~~eA~~~~~kAl~l~P~ 513 (626)
++++|+..|+++++++|.
T Consensus 68 ~~~~A~~~~~~al~~~~~ 85 (115)
T 2kat_A 68 DRAGARQAWESGLAAAQS 85 (115)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhccc
Confidence 999999999999999874
No 130
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.08 E-value=8.6e-10 Score=109.55 Aligned_cols=105 Identities=11% Similarity=0.202 Sum_probs=94.4
Q ss_pred HHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 006908 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 477 (626)
Q Consensus 398 a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~d 477 (626)
+..+...|..+++.|+|++|+..|++++. ..|.++ ....+++++|.||+++|+|.+|+..+.+++.+.
T Consensus 15 ~~~~~~~a~~~~~~g~~~~A~~~~~~~l~----~~p~~~--------~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~ 82 (261)
T 3qky_A 15 PQEAFERAMEFYNQGKYDRAIEYFKAVFT----YGRTHE--------WAADAQFYLARAYYQNKEYLLAASEYERFIQIY 82 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHGG----GCSCST--------THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHH----hCCCCc--------chHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHC
Confidence 56778899999999999999999999999 555542 224689999999999999999999999999998
Q ss_pred CCC---HHHHHHHHHHHHH--------cCCHHHHHHHHHHHHhcCCCC
Q 006908 478 PAH---VKGLYRRGMAYMA--------LGEFEEAQRDFEMMMKVDKSS 514 (626)
Q Consensus 478 p~~---~ka~~~~g~a~~~--------lg~~~eA~~~~~kAl~l~P~~ 514 (626)
|++ ..++|++|.++.. +|++++|+..|+++++++|++
T Consensus 83 p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~ 130 (261)
T 3qky_A 83 QIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNH 130 (261)
T ss_dssp TTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTC
T ss_pred CCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCc
Confidence 854 6799999999999 999999999999999999987
No 131
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.07 E-value=1e-09 Score=106.70 Aligned_cols=106 Identities=20% Similarity=0.297 Sum_probs=92.6
Q ss_pred HHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 006908 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 477 (626)
Q Consensus 398 a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~d 477 (626)
+..+...|..+++.|+|++|+..|++++. ..|.++ ....+++++|.|++++|+|.+|+..+.++++.+
T Consensus 4 ~~~~~~~a~~~~~~g~~~~A~~~~~~~~~----~~p~~~--------~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~ 71 (225)
T 2yhc_A 4 PNEIYATAQQKLQDGNWRQAITQLEALDN----RYPFGP--------YSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLN 71 (225)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHH----HCTTST--------THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCCCh--------HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHC
Confidence 45677889999999999999999999998 445432 123588999999999999999999999999999
Q ss_pred CCCHH---HHHHHHHHHHH------------------cCCHHHHHHHHHHHHhcCCCCH
Q 006908 478 PAHVK---GLYRRGMAYMA------------------LGEFEEAQRDFEMMMKVDKSSE 515 (626)
Q Consensus 478 p~~~k---a~~~~g~a~~~------------------lg~~~eA~~~~~kAl~l~P~~~ 515 (626)
|++.. |+|++|.++.. +|++++|+..|+++++..|++.
T Consensus 72 P~~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~ 130 (225)
T 2yhc_A 72 PTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQ 130 (225)
T ss_dssp TTCTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCT
T ss_pred cCCCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCCh
Confidence 99875 89999999987 5789999999999999999973
No 132
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.07 E-value=9.9e-10 Score=119.74 Aligned_cols=115 Identities=13% Similarity=0.117 Sum_probs=105.0
Q ss_pred HHHHHhhhchhhccccH-HHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 006908 398 AEKIRVTGNRLFKEGKF-ELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA 476 (626)
Q Consensus 398 a~~~k~~Gn~~f~~g~~-~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~ 476 (626)
+..+...|..++..|+| ++|+..|++|+. +.|.+ ..+|+++|.||+++|+|.+|+.+|.+++++
T Consensus 102 a~~~~~lg~~~~~~g~~~~~A~~~~~~al~----~~p~~-----------~~a~~~lg~~~~~~g~~~~A~~~~~~al~~ 166 (474)
T 4abn_A 102 AQALMLKGKALNVTPDYSPEAEVLLSKAVK----LEPEL-----------VEAWNQLGEVYWKKGDVTSAHTCFSGALTH 166 (474)
T ss_dssp HHHHHHHHHHHTSSSSCCHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHHTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhccccHHHHHHHHHHHHh----hCCCC-----------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 56778899999999999 999999999999 56665 458999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHc---------CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q 006908 477 NPAHVKGLYRRGMAYMAL---------GEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQR 529 (626)
Q Consensus 477 dp~~~ka~~~~g~a~~~l---------g~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~~~ 529 (626)
+|+ ..+++++|.++..+ |++++|+..|++|++++|++ ..++..+..+....
T Consensus 167 ~p~-~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~lg~~~~~~ 226 (474)
T 4abn_A 167 CKN-KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLD-GRSWYILGNAYLSL 226 (474)
T ss_dssp CCC-HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHH
T ss_pred CCC-HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHHH
Confidence 998 79999999999999 99999999999999999998 67888887776555
No 133
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.07 E-value=2.4e-09 Score=98.75 Aligned_cols=120 Identities=19% Similarity=0.248 Sum_probs=102.2
Q ss_pred HHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 006908 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 477 (626)
Q Consensus 398 a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~d 477 (626)
+..+...|..++..|++++|+..|.+++. ..|.+ ..++.++|.++..++++.+|+..+.+++..+
T Consensus 42 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~----~~~~~-----------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~ 106 (186)
T 3as5_A 42 VDVALHLGIAYVKTGAVDRGTELLERSLA----DAPDN-----------VKVATVLGLTYVQVQKYDLAVPLLIKVAEAN 106 (186)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHh----cCCCC-----------HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC
Confidence 44566788888999999999999999998 34444 4578999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 006908 478 PAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQEVE 533 (626)
Q Consensus 478 p~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~~~~~~~ 533 (626)
|.+..+++.+|.++..+|++++|+..|+++++++|.+ ..+...+..+........
T Consensus 107 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~-~~~~~~la~~~~~~~~~~ 161 (186)
T 3as5_A 107 PINFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNE-GKVHRAIAFSYEQMGRHE 161 (186)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHTTCHH
T ss_pred cHhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccc-hHHHHHHHHHHHHcCCHH
Confidence 9999999999999999999999999999999999987 567777776665544333
No 134
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.07 E-value=4e-10 Score=104.78 Aligned_cols=130 Identities=12% Similarity=0.110 Sum_probs=104.1
Q ss_pred HHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 006908 400 KIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANPA 479 (626)
Q Consensus 400 ~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~ 479 (626)
++...++.++..|+|++|+..|++++. ..|.+ ..+++++|.+++.+++|.+|+..+.+++.++|.
T Consensus 12 ~~~~~~~~~~~~~~~~~A~~~~~~al~----~~p~~-----------~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~ 76 (177)
T 2e2e_A 12 RQRDPLHQFASQQNPEAQLQALQDKIR----ANPQN-----------SEQWALLGEYYLWQNDYSNSLLAYRQALQLRGE 76 (177)
T ss_dssp CSSTTTCCCC-----CCCCHHHHHHHH----HCCSC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCS
T ss_pred HHhhhhhhhhhccCHHHHHHHHHHHHH----hCCCc-----------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC
Confidence 344667888999999999999999999 56655 458999999999999999999999999999999
Q ss_pred CHHHHHHHHHH-HHHcCCH--HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHccccC
Q 006908 480 HVKGLYRRGMA-YMALGEF--EEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQEVESKARKQFKGLFDK 546 (626)
Q Consensus 480 ~~ka~~~~g~a-~~~lg~~--~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 546 (626)
++.+++++|.+ +...|++ ++|+..|+++++++|++ ..+...+..+........+.. ..+.+.+..
T Consensus 77 ~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~-~~~~~~la~~~~~~g~~~~A~-~~~~~al~~ 144 (177)
T 2e2e_A 77 NAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNE-ITALMLLASDAFMQANYAQAI-ELWQKVMDL 144 (177)
T ss_dssp CHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHTTCHHHHH-HHHHHHHHT
T ss_pred CHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCc-HHHHHHHHHHHHHcccHHHHH-HHHHHHHhh
Confidence 99999999999 8899999 99999999999999997 677777877766655544433 344444443
No 135
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.06 E-value=3e-10 Score=103.20 Aligned_cols=89 Identities=11% Similarity=0.072 Sum_probs=79.2
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 006908 447 NLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLK 526 (626)
Q Consensus 447 ~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~ 526 (626)
...++++|.+++..|+|.+|+..+.+++.++|.++.+|+.+|.++..+|+|++|+..|++|+.++|++ ..+...+..+.
T Consensus 21 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~-~~~~~~lg~~~ 99 (148)
T 2vgx_A 21 LEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXE-PRFPFHAAECL 99 (148)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC-THHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCC-chHHHHHHHHH
Confidence 45789999999999999999999999999999999999999999999999999999999999999998 67777787776
Q ss_pred HHHHHHHHHH
Q 006908 527 KQRQEVESKA 536 (626)
Q Consensus 527 ~~~~~~~~~~ 536 (626)
....+..+..
T Consensus 100 ~~~g~~~~A~ 109 (148)
T 2vgx_A 100 LQXGELAEAE 109 (148)
T ss_dssp HHTTCHHHHH
T ss_pred HHcCCHHHHH
Confidence 6555444433
No 136
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.05 E-value=2.4e-09 Score=114.41 Aligned_cols=119 Identities=24% Similarity=0.420 Sum_probs=104.2
Q ss_pred HHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 006908 400 KIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANPA 479 (626)
Q Consensus 400 ~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~ 479 (626)
.+...|..+++.|+|++|+..|++++. +.|.+.. ....++.++|.++.++|++.+|+..|.+++.++|+
T Consensus 259 ~~~~~~~~~~~~g~~~~A~~~~~~~l~----~~p~~~~-------~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~ 327 (450)
T 2y4t_A 259 KLIESAEELIRDGRYTDATSKYESVMK----TEPSIAE-------YTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEPD 327 (450)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHH----HCCSSHH-------HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHh----cCCcchH-------HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcc
Confidence 345569999999999999999999999 5555422 23458899999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 006908 480 HVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQ 530 (626)
Q Consensus 480 ~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~~~~ 530 (626)
++.+|+.+|.++..+|++++|+..|+++++++|++ ..+...+..+.....
T Consensus 328 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~-~~~~~~l~~~~~~~~ 377 (450)
T 2y4t_A 328 NVNALKDRAEAYLIEEMYDEAIQDYETAQEHNEND-QQIREGLEKAQRLLK 377 (450)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSC-HHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcch-HHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999998 678878877765544
No 137
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.05 E-value=2.4e-09 Score=104.62 Aligned_cols=131 Identities=16% Similarity=0.164 Sum_probs=107.0
Q ss_pred HHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhH---------------HHHHhhhhhHHHHHHHHHHHHcCC
Q 006908 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEE---------------GKVFVGKRNLLHLNVAACLLKLGE 462 (626)
Q Consensus 398 a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee---------------~~~~~~~~~~~~~Nla~~~~kl~~ 462 (626)
+..+...|..++..|+|++|+..|++++.. .|..... .....+....++.++|.+++.+|+
T Consensus 79 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~----~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (258)
T 3uq3_A 79 SKSFARIGNAYHKLGDLKKTIEYYQKSLTE----HRTADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTKSD 154 (258)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhc----CchhHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHhcC
Confidence 677888999999999999999999999983 3321100 000122345689999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 006908 463 CRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQEVE 533 (626)
Q Consensus 463 ~~~A~~~~~~aL~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~~~~~~~ 533 (626)
|.+|+..+.+++.++|.++.+++++|.++..+|++++|+..|+++++++|++ ..+...+..+.....+..
T Consensus 155 ~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~~l~~~~~~~g~~~ 224 (258)
T 3uq3_A 155 WPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNF-VRAYIRKATAQIAVKEYA 224 (258)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHH-HHHHHHHHHHHHHHhhHH
Confidence 9999999999999999999999999999999999999999999999999997 567777776665544433
No 138
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.03 E-value=3e-10 Score=129.62 Aligned_cols=118 Identities=14% Similarity=0.122 Sum_probs=78.3
Q ss_pred HHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 006908 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 477 (626)
Q Consensus 398 a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~d 477 (626)
+..+...|..++..|+|++|+..|++++. ..|.+ ..+|+++|.+++++|+|++|+.+|.+||+++
T Consensus 433 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~----~~p~~-----------~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~ 497 (681)
T 2pzi_A 433 VELPLMEVRALLDLGDVAKATRKLDDLAE----RVGWR-----------WRLVWYRAVAELLTGDYDSATKHFTEVLDTF 497 (681)
T ss_dssp SHHHHHHHHHHHHHTCHHHHHHHHHHHHH----HHCCC-----------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred hhHHHHHHHHHHhcCCHHHHHHHHHHHhc----cCcch-----------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 55677778888888888888888888887 45555 3466666666666666666666666666666
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 006908 478 PAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQEV 532 (626)
Q Consensus 478 p~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~~~~~~ 532 (626)
|+++.+|+++|.++..+|+|++ +.+|++|++++|++ ..+...+..+...+.+.
T Consensus 498 P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~-~~a~~~lg~~~~~~g~~ 550 (681)
T 2pzi_A 498 PGELAPKLALAATAELAGNTDE-HKFYQTVWSTNDGV-ISAAFGLARARSAEGDR 550 (681)
T ss_dssp TTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTC-HHHHHHHHHHHHHTTCH
T ss_pred CCChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCch-HHHHHHHHHHHHHcCCH
Confidence 6666666666666666666666 66666666666665 45555555555444433
No 139
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.03 E-value=2.7e-09 Score=98.34 Aligned_cols=120 Identities=17% Similarity=0.184 Sum_probs=104.9
Q ss_pred HHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 006908 397 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA 476 (626)
Q Consensus 397 ~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~ 476 (626)
.+..+...|..++..|++++|+..|++++. ..|.+ ..++.++|.++..++++.+|+..+.+++.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~----~~~~~-----------~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 71 (186)
T 3as5_A 7 RQVYYRDKGISHAKAGRYSQAVMLLEQVYD----ADAFD-----------VDVALHLGIAYVKTGAVDRGTELLERSLAD 71 (186)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHTTTCC----TTSCC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhcCHHHHHHHHHHHHH----hCccC-----------hHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 466778899999999999999999999987 55554 458899999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 006908 477 NPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQEV 532 (626)
Q Consensus 477 dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~~~~~~ 532 (626)
+|.+..+++.+|.++...|++++|+..|++++.++|.+ ..+...+..+.......
T Consensus 72 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~-~~~~~~~a~~~~~~~~~ 126 (186)
T 3as5_A 72 APDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPIN-FNVRFRLGVALDNLGRF 126 (186)
T ss_dssp CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHTTCH
T ss_pred CCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHh-HHHHHHHHHHHHHcCcH
Confidence 99999999999999999999999999999999999987 56666666665444433
No 140
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.03 E-value=3.9e-10 Score=128.66 Aligned_cols=112 Identities=15% Similarity=0.120 Sum_probs=101.7
Q ss_pred HHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 006908 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 477 (626)
Q Consensus 398 a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~d 477 (626)
+..+...|..++..|+|++|+..|++|+. +.|.+ ..+++|+|.|+.++|+|++ +.+|++|++++
T Consensus 467 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~----l~P~~-----------~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~ 530 (681)
T 2pzi_A 467 WRLVWYRAVAELLTGDYDSATKHFTEVLD----TFPGE-----------LAPKLALAATAELAGNTDE-HKFYQTVWSTN 530 (681)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHH----HSTTC-----------SHHHHHHHHHHHHHTCCCT-TCHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCCC-----------hHHHHHHHHHHHHcCChHH-HHHHHHHHHhC
Confidence 34667889999999999999999999999 67766 4589999999999999999 99999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 006908 478 PAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLK 526 (626)
Q Consensus 478 p~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~ 526 (626)
|+++.+|+++|.++..+|++++|+++|++|++++|++ ..++..+..+.
T Consensus 531 P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~-~~a~~~~~~~~ 578 (681)
T 2pzi_A 531 DGVISAAFGLARARSAEGDRVGAVRTLDEVPPTSRHF-TTARLTSAVTL 578 (681)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHTSCTTSTTH-HHHHHHHHHHT
T ss_pred CchHHHHHHHHHHHHHcCCHHHHHHHHHhhcccCccc-HHHHHHHHHHH
Confidence 9999999999999999999999999999999999996 56776666664
No 141
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.02 E-value=2.3e-09 Score=111.51 Aligned_cols=118 Identities=15% Similarity=0.086 Sum_probs=97.3
Q ss_pred hhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q 006908 403 VTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVK 482 (626)
Q Consensus 403 ~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~~~k 482 (626)
..|..+...|++++|+..|++++. ..|... ...+++++|.++.++|+|.+|+..+.++++++|.++.
T Consensus 182 ~l~~~~~~~g~~~~A~~~~~~al~----~~p~~~---------~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~ 248 (365)
T 4eqf_A 182 RMSKSPVDSSVLEGVKELYLEAAH----QNGDMI---------DPDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPEDYS 248 (365)
T ss_dssp -------CCHHHHHHHHHHHHHHH----HSCSSC---------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHH----hCcCcc---------CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHH
Confidence 348889999999999999999999 455410 1458899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Q 006908 483 GLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQEVES 534 (626)
Q Consensus 483 a~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~~~~~~~~ 534 (626)
+|+++|.++..+|++++|+..|+++++++|++ ..+...+..+.....+..+
T Consensus 249 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~l~~~~~~~g~~~~ 299 (365)
T 4eqf_A 249 LWNRLGATLANGDRSEEAVEAYTRALEIQPGF-IRSRYNLGISCINLGAYRE 299 (365)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHHTCCHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCc-hHHHHHHHHHHHHCCCHHH
Confidence 99999999999999999999999999999997 6777788777665554443
No 142
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.01 E-value=4.8e-09 Score=104.06 Aligned_cols=120 Identities=20% Similarity=0.262 Sum_probs=101.1
Q ss_pred HHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHH--------cCCHHHHHHH
Q 006908 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLK--------LGECRKSIEA 469 (626)
Q Consensus 398 a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~k--------l~~~~~A~~~ 469 (626)
+..+...|..+++.|+|++|+..|++++. ..|.++. ...+++++|.|+++ ++++.+|+..
T Consensus 52 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~----~~p~~~~--------~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~ 119 (261)
T 3qky_A 52 ADAQFYLARAYYQNKEYLLAASEYERFIQ----IYQIDPR--------VPQAEYERAMCYYKLSPPYELDQTDTRKAIEA 119 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTCTT--------HHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHH----HCCCCch--------hHHHHHHHHHHHHHhcccccccchhHHHHHHH
Confidence 56678899999999999999999999999 4554421 24578999999999 9999999999
Q ss_pred HHHHHHhCCCCHHHH-----------------HHHHHHHHHcCCHHHHHHHHHHHHhcCCCCH--HHHHHHHHHHHHHH
Q 006908 470 CNKVLDANPAHVKGL-----------------YRRGMAYMALGEFEEAQRDFEMMMKVDKSSE--PDATAALSKLKKQR 529 (626)
Q Consensus 470 ~~~aL~~dp~~~ka~-----------------~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~--~~~~~~l~~l~~~~ 529 (626)
+.+++..+|++..+. +.+|.+|..+|+|++|+..|+++++..|++. ..+...+..+...+
T Consensus 120 ~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~ 198 (261)
T 3qky_A 120 FQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPWADDALVGAMRAYIAY 198 (261)
T ss_dssp HHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHh
Confidence 999999999986555 9999999999999999999999999999852 34555666555443
No 143
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.01 E-value=3.8e-09 Score=108.41 Aligned_cols=110 Identities=20% Similarity=0.375 Sum_probs=99.7
Q ss_pred HHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 006908 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 477 (626)
Q Consensus 398 a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~d 477 (626)
+..+...|+.++..|+|++|+..|++++. ..|.+ ..+++++|.|++.+|+|.+|+..+.+++.++
T Consensus 3 ~~~~~~~~~~~~~~g~~~~A~~~~~~~l~----~~p~~-----------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~ 67 (359)
T 3ieg_A 3 VEKHLELGKKLLAAGQLADALSQFHAAVD----GDPDN-----------YIAYYRRATVFLAMGKSKAALPDLTKVIALK 67 (359)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHh----hCccc-----------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Confidence 56788999999999999999999999999 55655 4589999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCC---CCHHHHHHHHH
Q 006908 478 PAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDK---SSEPDATAALS 523 (626)
Q Consensus 478 p~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P---~~~~~~~~~l~ 523 (626)
|.+..+++.+|.++..+|++++|+..|+++++++| ++ ..+...+.
T Consensus 68 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~-~~~~~~l~ 115 (359)
T 3ieg_A 68 MDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSEQEE-KEAESQLV 115 (359)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSCCCHHHH-HHHHHHHH
T ss_pred CCcchHHHHHHHHHHHcCChHHHHHHHHHHHhcCCcccCh-HHHHHHHH
Confidence 99999999999999999999999999999999999 65 45555553
No 144
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.01 E-value=1.8e-09 Score=118.18 Aligned_cols=111 Identities=29% Similarity=0.491 Sum_probs=98.8
Q ss_pred CCChhhHHHHHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHH
Q 006908 388 GLSFDGIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSI 467 (626)
Q Consensus 388 ~~~~~e~~~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~ 467 (626)
.++.++....+..+...|+.+++.|+|++|+..|++++. ..|.+ ..+++++|.||+++|+|.+|+
T Consensus 15 ~~~~~~~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~----~~p~~-----------~~~~~~la~~~~~~g~~~~A~ 79 (537)
T 3fp2_A 15 GLSPSQRQAYAVQLKNRGNHFFTAKNFNEAIKYYQYAIE----LDPNE-----------PVFYSNISACYISTGDLEKVI 79 (537)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHTTCCC-CHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHHTCHHHHH
T ss_pred CCCcchhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHh----hCCCC-----------cHHHHHHHHHHHHcCCHHHHH
Confidence 467788888999999999999999999999999999999 56665 468999999999999999999
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC
Q 006908 468 EACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSS 514 (626)
Q Consensus 468 ~~~~~aL~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~ 514 (626)
..|.+++.++|+++.+++++|.++..+|++++|+..|+ ++.++|+.
T Consensus 80 ~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~-~~~~~~~~ 125 (537)
T 3fp2_A 80 EFTTKALEIKPDHSKALLRRASANESLGNFTDAMFDLS-VLSLNGDF 125 (537)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHH-HHC-----
T ss_pred HHHHHHHhcCCchHHHHHHHHHHHHHcCCHHHHHHHHH-HHhcCCCC
Confidence 99999999999999999999999999999999999995 99998875
No 145
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.00 E-value=1.6e-09 Score=112.73 Aligned_cols=102 Identities=23% Similarity=0.409 Sum_probs=94.0
Q ss_pred HHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 006908 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 477 (626)
Q Consensus 398 a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~d 477 (626)
+..+...|..++..|+|++|+..|++++. ..|.+ ..+++++|.++.++|+|.+|+..+.++++++
T Consensus 213 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~----~~p~~-----------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 277 (365)
T 4eqf_A 213 PDLQTGLGVLFHLSGEFNRAIDAFNAALT----VRPED-----------YSLWNRLGATLANGDRSEEAVEAYTRALEIQ 277 (365)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHH----hCCCC-----------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC
Confidence 44567789999999999999999999999 55655 4589999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC
Q 006908 478 PAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSS 514 (626)
Q Consensus 478 p~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~ 514 (626)
|+++.+++++|.+|..+|++++|+..|++|++++|++
T Consensus 278 p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 314 (365)
T 4eqf_A 278 PGFIRSRYNLGISCINLGAYREAVSNFLTALSLQRKS 314 (365)
T ss_dssp TTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHCC
T ss_pred CCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCccc
Confidence 9999999999999999999999999999999998873
No 146
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.00 E-value=6.3e-09 Score=100.91 Aligned_cols=117 Identities=15% Similarity=0.107 Sum_probs=84.2
Q ss_pred HHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 006908 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 477 (626)
Q Consensus 398 a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~d 477 (626)
+..+...|..++..|++++|+..|.+++. ..|.+ ..++.++|.++..+|++.+|+..+.+++.++
T Consensus 57 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~----~~~~~-----------~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~ 121 (243)
T 2q7f_A 57 AIPYINFANLLSSVNELERALAFYDKALE----LDSSA-----------ATAYYGAGNVYVVKEMYKEAKDMFEKALRAG 121 (243)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH----cCCcc-----------hHHHHHHHHHHHHhccHHHHHHHHHHHHHhC
Confidence 34556677777888888888888888887 34433 3467777777777888888888888887777
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 006908 478 PAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQ 530 (626)
Q Consensus 478 p~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~~~~ 530 (626)
|.+..+++.+|.++..+|++++|+..|+++++++|++ ..+...+..+.....
T Consensus 122 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~ 173 (243)
T 2q7f_A 122 MENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNEND-TEARFQFGMCLANEG 173 (243)
T ss_dssp CCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcc-HHHHHHHHHHHHHcC
Confidence 7777777778888888888888888888887777776 455555555544333
No 147
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.00 E-value=2e-09 Score=104.52 Aligned_cols=120 Identities=18% Similarity=0.248 Sum_probs=88.1
Q ss_pred HHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 006908 397 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA 476 (626)
Q Consensus 397 ~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~ 476 (626)
.+..+...|..++..|+|++|+..|.+++. ..|.+ ..++.++|.++.+++++.+|+..+.+++.+
T Consensus 22 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~----~~~~~-----------~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 86 (243)
T 2q7f_A 22 ASMTGGQQMGRGSEFGDYEKAAEAFTKAIE----ENKED-----------AIPYINFANLLSSVNELERALAFYDKALEL 86 (243)
T ss_dssp --------------------CCTTHHHHHT----TCTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhCHHHHHHHHHHHHH----hCccc-----------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 466778899999999999999999999998 56655 458899999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 006908 477 NPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQEV 532 (626)
Q Consensus 477 dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~~~~~~ 532 (626)
+|.+..+++.+|.++..+|++++|+..|+++++++|.+ ..+...+..+.....+.
T Consensus 87 ~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~-~~~~~~~a~~~~~~~~~ 141 (243)
T 2q7f_A 87 DSSAATAYYGAGNVYVVKEMYKEAKDMFEKALRAGMEN-GDLFYMLGTVLVKLEQP 141 (243)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCS-HHHHHHHHHHHHHTSCH
T ss_pred CCcchHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHHhccH
Confidence 99999999999999999999999999999999999987 56666666665444433
No 148
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.00 E-value=3.5e-09 Score=115.32 Aligned_cols=138 Identities=11% Similarity=0.041 Sum_probs=109.1
Q ss_pred hhhHHHHHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHH
Q 006908 391 FDGIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEAC 470 (626)
Q Consensus 391 ~~e~~~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~ 470 (626)
+.++++.+..+.+.+..+..+|+|++|+..|+++|.....+...+ +...+..++|+|.+|..+|+|++|+..+
T Consensus 302 v~~~l~~a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~-------Hp~~a~~~~nLa~~y~~~g~~~eA~~~~ 374 (490)
T 3n71_A 302 VKEMIQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADT-------NLYVLRLLSIASEVLSYLQAYEEASHYA 374 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTT-------SHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCC-------CHHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 455667788888888888999999999999999999776654433 3446789999999999999999999999
Q ss_pred HHHHHhC-----CC---CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc-----CCCCHHHH---HHHHHHHHHHHHHHHH
Q 006908 471 NKVLDAN-----PA---HVKGLYRRGMAYMALGEFEEAQRDFEMMMKV-----DKSSEPDA---TAALSKLKKQRQEVES 534 (626)
Q Consensus 471 ~~aL~~d-----p~---~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l-----~P~~~~~~---~~~l~~l~~~~~~~~~ 534 (626)
.++|++. |+ -+.+++++|.+|..+|+|++|+..|++|+++ .|++ +.+ ...|..+...+..+++
T Consensus 375 ~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~H-p~~~~~~~~l~~~~~e~~~~~~ 453 (490)
T 3n71_A 375 RRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSH-PITKDLEAMRMQTEMELRMFRQ 453 (490)
T ss_dssp HHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTS-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCC-hHHHHHHHHHHHHHHHHHHHHH
Confidence 9999763 44 4678999999999999999999999999986 5665 443 3445555544444444
Q ss_pred HH
Q 006908 535 KA 536 (626)
Q Consensus 535 ~~ 536 (626)
.+
T Consensus 454 ae 455 (490)
T 3n71_A 454 NE 455 (490)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 149
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.00 E-value=1.2e-09 Score=96.39 Aligned_cols=68 Identities=13% Similarity=0.251 Sum_probs=65.4
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC
Q 006908 447 NLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSS 514 (626)
Q Consensus 447 ~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~ 514 (626)
+.++.|+|.++++.|+|++|+.+|.+||+++|+++.+|+++|.+|..+|+|++|+.+|++|++++|++
T Consensus 8 A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~ 75 (127)
T 4gcn_A 8 AIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRET 75 (127)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCccc
Confidence 56788999999999999999999999999999999999999999999999999999999999998865
No 150
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.00 E-value=1.8e-09 Score=107.10 Aligned_cols=113 Identities=14% Similarity=0.163 Sum_probs=83.8
Q ss_pred HhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q 006908 402 RVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANPAHV 481 (626)
Q Consensus 402 k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~~~ 481 (626)
...|..++..|+|++|+..|.+++. .. .+ ......+|.++|.|+..+|++.+|+..+.++++++|.++
T Consensus 41 ~~l~~~~~~~~~~~~A~~~~~~a~~-~~----~~-------~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~ 108 (272)
T 3u4t_A 41 NRRAVCYYELAKYDLAQKDIETYFS-KV----NA-------TKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRL 108 (272)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHT-TS----CT-------TTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCT
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHh-cc----Cc-------hhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccH
Confidence 3455555556666666666666555 11 11 112345688999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHH-HHHH
Q 006908 482 KGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALS-KLKK 527 (626)
Q Consensus 482 ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~-~l~~ 527 (626)
.+++.+|.++..+|++++|+..|+++++++|.+ ..+...+. .+..
T Consensus 109 ~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~~l~~~~~~ 154 (272)
T 3u4t_A 109 DMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTD-PKVFYELGQAYYY 154 (272)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCC-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCc-HHHHHHHHHHHHH
Confidence 999999999999999999999999999998887 56666666 4433
No 151
>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5
Probab=99.00 E-value=8.5e-10 Score=117.94 Aligned_cols=86 Identities=17% Similarity=0.162 Sum_probs=77.9
Q ss_pred CCCCCCCeEEEEEEEEeCCCcEEEecCCCccEEEEcCCCCccchHHHhhccCCCCcEEEEEEeCCccCCCCCCCCCCCcc
Q 006908 167 ETPRAPYEVKAWISAKTGDGKLILSHREGEPYFFTFGKSEVPKGLEMGIGTMTREEKAVIYVTSQYLTPSPLMPVVEGCE 246 (626)
Q Consensus 167 ~~~~~g~~V~v~y~~~~~~g~~~~s~~~~~p~~~~~g~g~~~~gle~~l~~mk~Ge~~~~~v~~~~~~g~~~~~~ip~~~ 246 (626)
..+..||.|++||+++ .+|+.|+++. +.|+.|.+|.|+++|||+++|.||++|+++.|.||+..+||... .++.
T Consensus 156 ~~~~~gD~V~i~y~g~-~dG~~fd~~~-~~~~~~~lG~g~~ipgfee~L~G~k~Ge~~~v~v~~~~~yg~~~----lag~ 229 (432)
T 1w26_A 156 GAVEAEDRVTIDFTGS-VDGEEFEGGK-ASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAEN----LKGK 229 (432)
T ss_dssp SCCCTTCEEEECEEEE-SSSCBCSSCC-CSSEEEETTSCCSCTTHHHHSSSCCSSCEEEEEEECCTTCSCTT----TSSC
T ss_pred CCCCCCCEEEEEEEEe-eCCeEccCCC-ccceEEEeCCCCcchHHHHHhCCCCCCCEEEEEECCchhhCCCC----CCCc
Confidence 5689999999999997 5999999776 78999999999999999999999999999999999999999653 2568
Q ss_pred eEEEEEEEeeEE
Q 006908 247 EVHFEVELVHLI 258 (626)
Q Consensus 247 ~l~~~v~l~~~~ 258 (626)
+++|+|+|+++.
T Consensus 230 ~~~F~V~v~~v~ 241 (432)
T 1w26_A 230 AAKFAINLKKVE 241 (432)
T ss_dssp EEEEEEECCEEC
T ss_pred eEEEEEEEEEEe
Confidence 999999999984
No 152
>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A
Probab=98.99 E-value=3.3e-10 Score=119.51 Aligned_cols=88 Identities=18% Similarity=0.312 Sum_probs=77.3
Q ss_pred CCCCCCEEEEEEEEEEcCCcEEEeeccCCCCCCcceEEEeCCCccchhHHhhcCCCCCCcEEEEEeeccccccCCCCCCC
Q 006908 44 TPSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTMLKGEVSMFKMKPQMHYGEDDCPVA 123 (626)
Q Consensus 44 ~p~~gd~V~v~y~~~~~dG~~~~st~~~~~~~~~p~~~~lg~~~~~~gle~~l~~m~~Ge~~~~~ip~~~~~g~~~~~~~ 123 (626)
.++.||.|++||+++ .||+.|+++. +.|+.|.+|.|+++|||+++|.||++|++++|.|++...||..+.
T Consensus 160 ~~~~gD~V~i~y~g~-~dG~~fd~~~------~~~~~~~lG~g~~ipgfee~L~Gmk~Ge~~~v~v~fp~dy~~~~l--- 229 (392)
T 1t11_A 160 AAENGKRVSIDFVGS-IDGVEFEGGK------AENFPLEMGAGRMIPGFEDGIVGKTKGMEFVIDVTFPEDYHAENL--- 229 (392)
T ss_dssp CCCTTCEEEEEEEEE-SSSSCCTTCE------EEEEEEETTSCCBSTTSGGGTTTCCSSCCCCEEEECCTTCSCTTT---
T ss_pred CCCCCCEEEEEEEEE-ECCEEccCCC------ccceEEEecCCCcchhHHHHhCCCCCCCEEEEEEeCccccccCCC---
Confidence 378999999999999 5999998764 469999999999999999999999999999999986678886654
Q ss_pred CCCCCCCCceEEEEEEeeeecccc
Q 006908 124 APSTFPKDEELHFEIEMIDFAKAK 147 (626)
Q Consensus 124 ~~~~i~~~~~lv~~v~l~~~~~~~ 147 (626)
+|++++|+|+|+++....
T Consensus 230 ------aGk~~~F~V~v~~i~~~~ 247 (392)
T 1t11_A 230 ------KGKAAKFAIKVNKVEARE 247 (392)
T ss_dssp ------SSCEEEECCCEEEEEEEE
T ss_pred ------CCCeEEEEEEEEEEEcCC
Confidence 489999999999997543
No 153
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=98.98 E-value=4.7e-09 Score=91.61 Aligned_cols=88 Identities=16% Similarity=0.136 Sum_probs=78.6
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 006908 447 NLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLK 526 (626)
Q Consensus 447 ~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~ 526 (626)
+..+.++|.++++.|+|.+|+..+.+++.++|.++.+|+++|.++..+|+|++|+.+|++|++++|++ ..+...+..+.
T Consensus 4 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~-~~~~~~lg~~~ 82 (126)
T 3upv_A 4 AEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNF-VRAYIRKATAQ 82 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc-HHHHHHHHHHH
Confidence 45789999999999999999999999999999999999999999999999999999999999999998 67777777776
Q ss_pred HHHHHHHHH
Q 006908 527 KQRQEVESK 535 (626)
Q Consensus 527 ~~~~~~~~~ 535 (626)
....+..+.
T Consensus 83 ~~~~~~~~A 91 (126)
T 3upv_A 83 IAVKEYASA 91 (126)
T ss_dssp HHTTCHHHH
T ss_pred HHHhCHHHH
Confidence 655544433
No 154
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=98.98 E-value=7.9e-09 Score=90.28 Aligned_cols=95 Identities=13% Similarity=0.098 Sum_probs=82.2
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Q 006908 448 LLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKK 527 (626)
Q Consensus 448 ~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~ 527 (626)
..++++|.++++.|+|.+|+..+.++++++|+++.+|+.+|.++..+|++++|+..|++|++++|++ ..+...|..+..
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~-~~~~~~la~~~~ 96 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKD-IAVHAALAVSHT 96 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHH
Confidence 3578899999999999999999999999999999999999999999999999999999999999998 678888888877
Q ss_pred HHHHHHHHHHHHHHccc
Q 006908 528 QRQEVESKARKQFKGLF 544 (626)
Q Consensus 528 ~~~~~~~~~~~~~~~~~ 544 (626)
...+..+... .+.+..
T Consensus 97 ~~g~~~~A~~-~~~~al 112 (121)
T 1hxi_A 97 NEHNANAALA-SLRAWL 112 (121)
T ss_dssp HHHHHHHHHH-HHHHHH
T ss_pred HcCCHHHHHH-HHHHHH
Confidence 6666555443 444433
No 155
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=98.98 E-value=3.5e-09 Score=107.62 Aligned_cols=112 Identities=21% Similarity=0.257 Sum_probs=62.0
Q ss_pred HHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHH-------------------HHH------hhhhhHHHHHH
Q 006908 399 EKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEG-------------------KVF------VGKRNLLHLNV 453 (626)
Q Consensus 399 ~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~-------------------~~~------~~~~~~~~~Nl 453 (626)
..+...|..+.+.|++++|+..|++++. ..|++.... ..+ .+....+++|+
T Consensus 131 ~~~~~l~~~~~~~g~~~~A~~~l~~~~~----~~p~~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~~~~~~~~l 206 (291)
T 3mkr_A 131 ECMAMTVQILLKLDRLDLARKELKKMQD----QDEDATLTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSPTLLLLNGQ 206 (291)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCCCHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHh----hCcCcHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCCCcHHHHHHH
Confidence 3455567777777788888888887776 344331000 000 00112345555
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHH-HHHHHHHHHhcCCCC
Q 006908 454 AACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEE-AQRDFEMMMKVDKSS 514 (626)
Q Consensus 454 a~~~~kl~~~~~A~~~~~~aL~~dp~~~ka~~~~g~a~~~lg~~~e-A~~~~~kAl~l~P~~ 514 (626)
|.|+.++|+|++|+..+.++|.++|+++.+++++|.++..+|++++ |..+++++++++|++
T Consensus 207 a~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa~~~~~~~~~~~P~~ 268 (291)
T 3mkr_A 207 AACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPPEVTNRYLSQLKDAHRSH 268 (291)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCC
Confidence 5566666666666666666666666566666666655555555544 345555555565555
No 156
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=98.98 E-value=2.6e-09 Score=110.76 Aligned_cols=101 Identities=22% Similarity=0.366 Sum_probs=74.1
Q ss_pred HHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 006908 399 EKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANP 478 (626)
Q Consensus 399 ~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp 478 (626)
..+...|..+++.|+|++|+..|++++. +.|.+ ..+++++|.++.++|++.+|+..+.+++.++|
T Consensus 218 ~~~~~l~~~~~~~g~~~~A~~~~~~al~----~~~~~-----------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 282 (368)
T 1fch_A 218 DVQCGLGVLFNLSGEYDKAVDCFTAALS----VRPND-----------YLLWNKLGATLANGNQSEEAVAAYRRALELQP 282 (368)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCcCC-----------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 4455667777777777777777777777 34443 34677777777777777777777777777777
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC
Q 006908 479 AHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSS 514 (626)
Q Consensus 479 ~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~ 514 (626)
.++.+++++|.++..+|++++|+..|+++++++|++
T Consensus 283 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 318 (368)
T 1fch_A 283 GYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKS 318 (368)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC
T ss_pred CcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCC
Confidence 777777777777777777777777777777777664
No 157
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=98.98 E-value=4.8e-09 Score=90.98 Aligned_cols=101 Identities=27% Similarity=0.492 Sum_probs=91.0
Q ss_pred HHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 006908 399 EKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANP 478 (626)
Q Consensus 399 ~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp 478 (626)
..+...|..++..|++++|+..|.+++. ..|.+ ..++.++|.++..++++.+|+..+.+++...|
T Consensus 36 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~----~~~~~-----------~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~ 100 (136)
T 2fo7_A 36 EAWYNLGNAYYKQGDYDEAIEYYQKALE----LDPRS-----------AEAWYNLGNAYYKQGDYDEAIEYYQKALELDP 100 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCT
T ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHH----HCCCc-----------hHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC
Confidence 3455678888999999999999999998 34444 34788999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC
Q 006908 479 AHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSS 514 (626)
Q Consensus 479 ~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~ 514 (626)
.+..+++.+|.++..+|++++|+..|++++.++|++
T Consensus 101 ~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 136 (136)
T 2fo7_A 101 RSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRS 136 (136)
T ss_dssp TCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHSTTC
T ss_pred CChHHHHHHHHHHHHHccHHHHHHHHHHHHccCCCC
Confidence 999999999999999999999999999999999863
No 158
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.97 E-value=1e-08 Score=109.58 Aligned_cols=104 Identities=20% Similarity=0.388 Sum_probs=97.3
Q ss_pred HHHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 006908 396 DEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLD 475 (626)
Q Consensus 396 ~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~ 475 (626)
..+..+...|..+++.|+|.+|+..|++++. ..|.+ ..+++++|.|++.+|++.+|+..+.++++
T Consensus 24 ~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~----~~p~~-----------~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 88 (450)
T 2y4t_A 24 ADVEKHLELGKKLLAAGQLADALSQFHAAVD----GDPDN-----------YIAYYRRATVFLAMGKSKAALPDLTKVIQ 88 (450)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH----hCCcc-----------HHHHHHHHHHHHHCCCHHHHHHHHHHHHh
Confidence 4577888999999999999999999999998 45554 56899999999999999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC
Q 006908 476 ANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSS 514 (626)
Q Consensus 476 ~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~ 514 (626)
++|.++.+++.+|.+|..+|++++|+..|+++++++|++
T Consensus 89 ~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~ 127 (450)
T 2y4t_A 89 LKMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSE 127 (450)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCCCH
T ss_pred cCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC
Confidence 999999999999999999999999999999999999986
No 159
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=98.96 E-value=8.5e-09 Score=83.85 Aligned_cols=79 Identities=24% Similarity=0.446 Sum_probs=72.8
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 006908 447 NLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLK 526 (626)
Q Consensus 447 ~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~ 526 (626)
..+++++|.+++.+++|.+|+..+.+++.++|.+..+++++|.++..+|++++|+..|+++++++|++ ..+...+..+.
T Consensus 9 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~-~~~~~~l~~~~ 87 (91)
T 1na3_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN-AEAKQNLGNAK 87 (91)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCC-HHHHHHHHHHH
Confidence 45789999999999999999999999999999999999999999999999999999999999999997 56766666554
No 160
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=98.96 E-value=1.1e-08 Score=97.60 Aligned_cols=97 Identities=16% Similarity=0.160 Sum_probs=49.1
Q ss_pred HHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 006908 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 477 (626)
Q Consensus 398 a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~d 477 (626)
+..+...|..++..|++++|+..|++++. ..|.+ ..++.++|.++..+|++.+|+..+.+++.++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~----~~~~~-----------~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~ 72 (225)
T 2vq2_A 8 SNIKTQLAMEYMRGQDYRQATASIEDALK----SDPKN-----------ELAWLVRAEIYQYLKVNDKAQESFRQALSIK 72 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHH----hCccc-----------hHHHHHHHHHHHHcCChHHHHHHHHHHHHhC
Confidence 44455566666666666666666666665 23332 1234444444444444444444444444444
Q ss_pred CCCHHHHHHHHHHHHHc-CCHHHHHHHHHHHHh
Q 006908 478 PAHVKGLYRRGMAYMAL-GEFEEAQRDFEMMMK 509 (626)
Q Consensus 478 p~~~ka~~~~g~a~~~l-g~~~eA~~~~~kAl~ 509 (626)
|.+..+++.+|.++..+ |++++|+..|+++++
T Consensus 73 ~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~ 105 (225)
T 2vq2_A 73 PDSAEINNNYGWFLCGRLNRPAESMAYFDKALA 105 (225)
T ss_dssp TTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHHT
T ss_pred CCChHHHHHHHHHHHHhcCcHHHHHHHHHHHHc
Confidence 44444444444444444 444444444444444
No 161
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=98.95 E-value=4.7e-09 Score=106.65 Aligned_cols=120 Identities=17% Similarity=0.217 Sum_probs=94.1
Q ss_pred HHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 006908 399 EKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANP 478 (626)
Q Consensus 399 ~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp 478 (626)
..+...|..++..|+|++|+..|++++........... ......++.++|.++.++|++++|+..+.+++.++|
T Consensus 194 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~ 267 (330)
T 3hym_B 194 FVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVT------VDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIP 267 (330)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCT------TTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhcccccc------ccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCc
Confidence 34556666677777777777777777764432211100 012246899999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q 006908 479 AHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKL 525 (626)
Q Consensus 479 ~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l 525 (626)
+++.+++++|.++..+|++++|+..|+++++++|++ ..+...+..+
T Consensus 268 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~l~~~ 313 (330)
T 3hym_B 268 QNASTYSAIGYIHSLMGNFENAVDYFHTALGLRRDD-TFSVTMLGHC 313 (330)
T ss_dssp TCSHHHHHHHHHHHHHTCHHHHHHHHHTTTTTCSCC-HHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHhccHHHHHHHHHHHHccCCCc-hHHHHHHHHH
Confidence 999999999999999999999999999999999997 5666666554
No 162
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=98.95 E-value=2e-09 Score=96.60 Aligned_cols=88 Identities=10% Similarity=0.089 Sum_probs=78.2
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 006908 447 NLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLK 526 (626)
Q Consensus 447 ~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~ 526 (626)
...++++|.++++.|+|.+|+..+.+++.++|.++.+|+.+|.++..+|+|++|+..|++|+.++|++ ..+...+..+.
T Consensus 18 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~lg~~~ 96 (142)
T 2xcb_A 18 LEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDINE-PRFPFHAAECH 96 (142)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-THHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCC-cHHHHHHHHHH
Confidence 45788999999999999999999999999999999999999999999999999999999999999998 56777777776
Q ss_pred HHHHHHHHH
Q 006908 527 KQRQEVESK 535 (626)
Q Consensus 527 ~~~~~~~~~ 535 (626)
....+..+.
T Consensus 97 ~~~g~~~~A 105 (142)
T 2xcb_A 97 LQLGDLDGA 105 (142)
T ss_dssp HHTTCHHHH
T ss_pred HHcCCHHHH
Confidence 555544433
No 163
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.94 E-value=4.4e-09 Score=106.59 Aligned_cols=118 Identities=14% Similarity=0.153 Sum_probs=94.8
Q ss_pred HHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHH----------
Q 006908 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSI---------- 467 (626)
Q Consensus 398 a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~---------- 467 (626)
...+...|..++..|++++|+..|++++. ..|.+. .+++++|.+++.+|++++|+
T Consensus 117 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~----~~P~~~-----------~a~~~la~~~~~~g~~~~A~~~l~~~~~~~ 181 (287)
T 3qou_A 117 EELXAQQAMQLMQESNYTDALPLLXDAWQ----LSNQNG-----------EIGLLLAETLIALNRSEDAEAVLXTIPLQD 181 (287)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HTTSCH-----------HHHHHHHHHHHHTTCHHHHHHHHTTSCGGG
T ss_pred hhhHHHHHHHHHhCCCHHHHHHHHHHHHH----hCCcch-----------hHHHHHHHHHHHCCCHHHHHHHHHhCchhh
Confidence 45677899999999999999999999999 677763 36677777777777766654
Q ss_pred ------------------------HHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCH-HHHHHHH
Q 006908 468 ------------------------EACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSE-PDATAAL 522 (626)
Q Consensus 468 ------------------------~~~~~aL~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~-~~~~~~l 522 (626)
..+.+++.++|+++.+++++|.++...|++++|+..|+++++++|++. ..++..|
T Consensus 182 p~~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l 261 (287)
T 3qou_A 182 QDTRYQGLVAQIELLXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTF 261 (287)
T ss_dssp CSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHH
T ss_pred cchHHHHHHHHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHH
Confidence 555666788999999999999999999999999999999999999862 3566666
Q ss_pred HHHHHHHH
Q 006908 523 SKLKKQRQ 530 (626)
Q Consensus 523 ~~l~~~~~ 530 (626)
..+...+.
T Consensus 262 ~~~~~~~g 269 (287)
T 3qou_A 262 QEILAALG 269 (287)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHcC
Confidence 66655543
No 164
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=98.94 E-value=6.8e-09 Score=108.99 Aligned_cols=128 Identities=16% Similarity=0.245 Sum_probs=84.5
Q ss_pred HHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHH-----------------H------HHhhhhhHHHHHHH
Q 006908 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEG-----------------K------VFVGKRNLLHLNVA 454 (626)
Q Consensus 398 a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~-----------------~------~~~~~~~~~~~Nla 454 (626)
+..+...|..+.+.|++++|+..|++++. +.|.+.+-. . ...+....++.++|
T Consensus 169 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~----~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~ 244 (388)
T 1w3b_A 169 AVAWSNLGCVFNAQGEIWLAIHHFEKAVT----LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLA 244 (388)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHh----cCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcCCHHHHHHHH
Confidence 45566677777777777777777777776 344332100 0 01111245677777
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 006908 455 ACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQ 530 (626)
Q Consensus 455 ~~~~kl~~~~~A~~~~~~aL~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~~~~ 530 (626)
.++.++|++++|+..+.++++++|.++.+++++|.++..+|++++|+..|+++++++|++ ..+...+..+.....
T Consensus 245 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~l~~~~~~~g 319 (388)
T 1w3b_A 245 CVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTH-ADSLNNLANIKREQG 319 (388)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHTTT
T ss_pred HHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCccc-HHHHHHHHHHHHHcC
Confidence 777777777777777777777777777777777777777777777777777777777776 455555655544433
No 165
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=98.94 E-value=9.4e-09 Score=100.64 Aligned_cols=110 Identities=14% Similarity=0.207 Sum_probs=58.1
Q ss_pred HHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHH--hC
Q 006908 400 KIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLD--AN 477 (626)
Q Consensus 400 ~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~--~d 477 (626)
.+...|..++..|++++|+..|.+++. ..|.+ ..++.++|.++..+|++.+|+..+.+++. .+
T Consensus 73 ~~~~la~~~~~~~~~~~A~~~~~~a~~----~~~~~-----------~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~ 137 (252)
T 2ho1_A 73 AHAALAVVFQTEMEPKLADEEYRKALA----SDSRN-----------ARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLY 137 (252)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH----HCcCc-----------HHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccC
Confidence 444556666666666666666666665 23322 23445555555555555555555555555 44
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q 006908 478 PAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKL 525 (626)
Q Consensus 478 p~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l 525 (626)
|.++.+++.+|.++..+|++++|+..|+++++++|.+ ..+...+..+
T Consensus 138 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~-~~~~~~la~~ 184 (252)
T 2ho1_A 138 PERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRNQ-PSVALEMADL 184 (252)
T ss_dssp TTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCC-HHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCccc-HHHHHHHHHH
Confidence 5555555555555555555555555555555555544 3333344333
No 166
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=98.94 E-value=9.8e-09 Score=107.77 Aligned_cols=128 Identities=20% Similarity=0.158 Sum_probs=91.0
Q ss_pred HHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHH-----------------------HHHhhhhhHHHHHHH
Q 006908 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEG-----------------------KVFVGKRNLLHLNVA 454 (626)
Q Consensus 398 a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~-----------------------~~~~~~~~~~~~Nla 454 (626)
+..+...|..+...|++++|+..|.+++. ..|.+..-. ....+....+++++|
T Consensus 135 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~----~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg 210 (388)
T 1w3b_A 135 YCVRSDLGNLLKALGRLEEAKACYLKAIE----TQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLG 210 (388)
T ss_dssp THHHHHHHHHHHTTSCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHH----hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 44566789999999999999999999998 455442110 001122345677777
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 006908 455 ACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQ 530 (626)
Q Consensus 455 ~~~~kl~~~~~A~~~~~~aL~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~~~~ 530 (626)
.++..+++|++|+..+.+++.++|+++.+++++|.++..+|++++|+..|+++++++|++ ..+...+..+.....
T Consensus 211 ~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~l~~~~~~~g 285 (388)
T 1w3b_A 211 NVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHF-PDAYCNLANALKEKG 285 (388)
T ss_dssp HHHHTTTCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSC-HHHHHHHHHHHHHHS
T ss_pred HHHHHcCCHHHHHHHHHHHHhhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC-HHHHHHHHHHHHHcC
Confidence 777777777777777777777777777788888888888888888888888888888776 456666655544443
No 167
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=98.94 E-value=1.1e-08 Score=97.59 Aligned_cols=67 Identities=18% Similarity=0.203 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCC-CC
Q 006908 448 LLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDK-SS 514 (626)
Q Consensus 448 ~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P-~~ 514 (626)
.++.++|.++.++|++++|+..+.+++..+|.+..+++.+|.++..+|++++|+..|+++++++| .+
T Consensus 114 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~ 181 (225)
T 2vq2_A 114 IANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKMLAGQLGDADYYFKKYQSRVEVLQ 181 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSCC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCC
Confidence 35556666666666666666666666666666666666666666666666666666666666665 44
No 168
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=98.94 E-value=1.1e-08 Score=101.17 Aligned_cols=119 Identities=17% Similarity=0.139 Sum_probs=99.9
Q ss_pred hhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q 006908 403 VTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVK 482 (626)
Q Consensus 403 ~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~~~k 482 (626)
..+..+...++|++|+..|++++.. .+.++ .....+++++|.++..+|+|.+|+..+.+++.++|.++.
T Consensus 10 ~~~~~~~~~~~~~~A~~~~~~~~~~----~~~~~-------~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~ 78 (275)
T 1xnf_A 10 VLAVPLQPTLQQEVILARMEQILAS----RALTD-------DERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPE 78 (275)
T ss_dssp GSCCCCCCCHHHHHHHHHHHHHHTS----SCCCH-------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHH
T ss_pred ceeeccCccchHHHHHHHHHHHHhc----ccccC-------chhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHH
Confidence 3555667789999999999999983 22221 123568999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 006908 483 GLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQEVE 533 (626)
Q Consensus 483 a~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~~~~~~~ 533 (626)
+++.+|.++..+|++++|+..|+++++++|.+ ..+...+..+........
T Consensus 79 ~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~~la~~~~~~g~~~ 128 (275)
T 1xnf_A 79 VFNYLGIYLTQAGNFDAAYEAFDSVLELDPTY-NYAHLNRGIALYYGGRDK 128 (275)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-THHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHhcCccc-cHHHHHHHHHHHHhccHH
Confidence 99999999999999999999999999999987 567777777665544433
No 169
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=98.93 E-value=6.5e-09 Score=102.96 Aligned_cols=115 Identities=16% Similarity=0.202 Sum_probs=98.8
Q ss_pred HHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 006908 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 477 (626)
Q Consensus 398 a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~d 477 (626)
+..+...|..++..|+|++|+..|.+++. ..|.+ ..++.++|.+|..+|+|++|+..+.++++++
T Consensus 74 ~~~~~~lg~~~~~~~~~~~A~~~~~~a~~----~~~~~-----------~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~ 138 (272)
T 3u4t_A 74 SADFEYYGKILMKKGQDSLAIQQYQAAVD----RDTTR-----------LDMYGQIGSYFYNKGNFPLAIQYMEKQIRPT 138 (272)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HSTTC-----------THHHHHHHHHHHHTTCHHHHHHHHGGGCCSS
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHh----cCccc-----------HHHHHHHHHHHHHccCHHHHHHHHHHHhhcC
Confidence 44567899999999999999999999999 55554 4589999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q 006908 478 PAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQ 528 (626)
Q Consensus 478 p~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~~ 528 (626)
|.++.+++++|..+...+++++|+..|+++++++|++ ..+...+..+...
T Consensus 139 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~-~~~~~~~~~~~~~ 188 (272)
T 3u4t_A 139 TTDPKVFYELGQAYYYNKEYVKADSSFVKVLELKPNI-YIGYLWRARANAA 188 (272)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC-HHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccc-hHHHHHHHHHHHH
Confidence 9999999999955555669999999999999999997 4555555555443
No 170
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=98.93 E-value=7.5e-09 Score=101.34 Aligned_cols=119 Identities=18% Similarity=0.166 Sum_probs=103.9
Q ss_pred HHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 006908 397 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA 476 (626)
Q Consensus 397 ~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~ 476 (626)
.+..+...|..++..|+|++|+..|++++. ..|.+ ..++.++|.++..++++.+|+..+.+++.+
T Consensus 36 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~----~~~~~-----------~~~~~~la~~~~~~~~~~~A~~~~~~a~~~ 100 (252)
T 2ho1_A 36 ARDAYIQLGLGYLQRGNTEQAKVPLRKALE----IDPSS-----------ADAHAALAVVFQTEMEPKLADEEYRKALAS 100 (252)
T ss_dssp HHHHHHHHHHHHHHTTCTGGGHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHh----cCCCh-----------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 478889999999999999999999999998 45544 458899999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHH
Q 006908 477 NPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMK--VDKSSEPDATAALSKLKKQRQE 531 (626)
Q Consensus 477 dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~--l~P~~~~~~~~~l~~l~~~~~~ 531 (626)
+|.+..+++.+|.++..+|++++|+..|++++. .+|.+ ..+...+..+.....+
T Consensus 101 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~-~~~~~~la~~~~~~g~ 156 (252)
T 2ho1_A 101 DSRNARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPER-SRVFENLGLVSLQMKK 156 (252)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTH-HHHHHHHHHHHHHTTC
T ss_pred CcCcHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCccc-HHHHHHHHHHHHHcCC
Confidence 999999999999999999999999999999999 77764 5566666665544433
No 171
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=98.93 E-value=1.6e-08 Score=102.75 Aligned_cols=69 Identities=16% Similarity=0.175 Sum_probs=48.4
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q 006908 460 LGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQR 529 (626)
Q Consensus 460 l~~~~~A~~~~~~aL~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~~~ 529 (626)
.+++.+|+..+.+++..+|.++.+|+.+|.++..+|++++|+..|++|++++|++ +++..++..+....
T Consensus 179 ~~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~-~~~l~~l~~~~~~~ 247 (291)
T 3mkr_A 179 GEKLQDAYYIFQEMADKCSPTLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGH-PETLINLVVLSQHL 247 (291)
T ss_dssp TTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHT
T ss_pred chHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHHc
Confidence 3677777777777777777777777777777777777777777777777777776 55555555544333
No 172
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=98.92 E-value=8.5e-09 Score=104.58 Aligned_cols=121 Identities=17% Similarity=0.260 Sum_probs=100.1
Q ss_pred HHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 006908 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 477 (626)
Q Consensus 398 a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~d 477 (626)
+..+...|..++..|++++|+..|++++. ..|.+ ..++.++|.++..+|++.+|+..+.++++++
T Consensus 172 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~----~~~~~-----------~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~ 236 (327)
T 3cv0_A 172 AQLHASLGVLYNLSNNYDSAAANLRRAVE----LRPDD-----------AQLWNKLGATLANGNRPQEALDAYNRALDIN 236 (327)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHH----hCCCc-----------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 34566788888999999999999999998 45544 3578899999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC-----------HHHHHHHHHHHHHHHHHHH
Q 006908 478 PAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSS-----------EPDATAALSKLKKQRQEVE 533 (626)
Q Consensus 478 p~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~-----------~~~~~~~l~~l~~~~~~~~ 533 (626)
|.+..+++.+|.++..+|++++|+..|++++.++|.+ ...+...+..+.....+..
T Consensus 237 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~ 303 (327)
T 3cv0_A 237 PGYVRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVGGTTPTGEASREATRSMWDFFRMLLNVMNRPD 303 (327)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCC-----CCTHHHHHHHHHHHHHHHTTCHH
T ss_pred CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccccccccchhhcCHHHHHHHHHHHHhcCCHH
Confidence 9999999999999999999999999999999999882 2556666666655544433
No 173
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=98.92 E-value=1.1e-08 Score=86.38 Aligned_cols=68 Identities=19% Similarity=0.340 Sum_probs=65.8
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC
Q 006908 447 NLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSS 514 (626)
Q Consensus 447 ~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~ 514 (626)
+..++++|.+++++|+|.+|+..+.+++.++|.++.+++++|.++..+|++++|+..|+++++++|++
T Consensus 4 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 71 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTA 71 (111)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSST
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc
Confidence 45789999999999999999999999999999999999999999999999999999999999999986
No 174
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=98.91 E-value=6.4e-09 Score=94.88 Aligned_cols=89 Identities=13% Similarity=0.102 Sum_probs=76.3
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-------CHH-----HHHHHHHHHHHcCCHHHHHHHHHHHHhc----
Q 006908 447 NLLHLNVAACLLKLGECRKSIEACNKVLDANPA-------HVK-----GLYRRGMAYMALGEFEEAQRDFEMMMKV---- 510 (626)
Q Consensus 447 ~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~-------~~k-----a~~~~g~a~~~lg~~~eA~~~~~kAl~l---- 510 (626)
+..+.|+|.+++++|+|++|+..|++||+++|+ +.. +|+++|.|+..+|+|++|+.+|++||++
T Consensus 11 a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~ 90 (159)
T 2hr2_A 11 AYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRR 90 (159)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhcc
Confidence 557899999999999999999999999999999 554 9999999999999999999999999999
Q ss_pred ---CCCCHHHHH----HHHHHHHHHHHHHHHHH
Q 006908 511 ---DKSSEPDAT----AALSKLKKQRQEVESKA 536 (626)
Q Consensus 511 ---~P~~~~~~~----~~l~~l~~~~~~~~~~~ 536 (626)
+|++ ..++ ..+..+...+.+..+..
T Consensus 91 ~e~~pd~-~~A~~~~~~~rG~aL~~lgr~eEAl 122 (159)
T 2hr2_A 91 GELNQDE-GKLWISAVYSRALALDGLGRGAEAM 122 (159)
T ss_dssp CCTTSTH-HHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred ccCCCch-HHHHHHHHHhHHHHHHHCCCHHHHH
Confidence 9986 5677 66666655555544443
No 175
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.91 E-value=5.2e-09 Score=106.17 Aligned_cols=110 Identities=12% Similarity=0.095 Sum_probs=94.2
Q ss_pred HHHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHc-CCHHHHHHHHHHHH
Q 006908 396 DEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKL-GECRKSIEACNKVL 474 (626)
Q Consensus 396 ~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl-~~~~~A~~~~~~aL 474 (626)
..+..+.+.|+.+.+.|+|++|+.+|++|+.+..... + ....+.++.|+|.+|..+ |+|++|+.+|.+||
T Consensus 75 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g--~-------~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al 145 (292)
T 1qqe_A 75 EAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRG--Q-------FRRGANFKFELGEILENDLHDYAKAIDCYELAG 145 (292)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--C-------HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcC--C-------HHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHH
Confidence 3577888999999999999999999999999644321 1 112356899999999995 99999999999999
Q ss_pred HhCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC
Q 006908 475 DANPAH------VKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSS 514 (626)
Q Consensus 475 ~~dp~~------~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~ 514 (626)
++.|.+ ..++.++|.++..+|+|++|+..|++++++.|++
T Consensus 146 ~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 191 (292)
T 1qqe_A 146 EWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGN 191 (292)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSC
T ss_pred HHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcC
Confidence 998754 5789999999999999999999999999999876
No 176
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.90 E-value=4.3e-09 Score=88.50 Aligned_cols=67 Identities=16% Similarity=0.307 Sum_probs=64.2
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC
Q 006908 447 NLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKS 513 (626)
Q Consensus 447 ~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~ 513 (626)
..+++++|.+++++|+|++|+..+.++++++|+++.+|+++|.+|..+|++++|+..|++|+++.|.
T Consensus 7 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~ 73 (100)
T 3ma5_A 7 PFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVARE 73 (100)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhc
Confidence 4589999999999999999999999999999999999999999999999999999999999999764
No 177
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=98.90 E-value=2.5e-08 Score=103.32 Aligned_cols=133 Identities=11% Similarity=0.031 Sum_probs=104.4
Q ss_pred HHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHH-------------------------------------
Q 006908 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGK------------------------------------- 440 (626)
Q Consensus 398 a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~------------------------------------- 440 (626)
+..+...|..++..|++++|+..|.+++. ..|.+.....
T Consensus 132 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a 207 (368)
T 1fch_A 132 QTALMALAVSFTNESLQRQACEILRDWLR----YTPAYAHLVTPAEEGAGGAGLGPSKRILGSLLSDSLFLEVKELFLAA 207 (368)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----TSTTTGGGCC---------------CTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCcCcHHHHHHHHHHhhhhcccHHHHHHHHHhhcccHHHHHHHHHHH
Confidence 34556677778888888888888888877 3333221100
Q ss_pred -HHhhh--hhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHH
Q 006908 441 -VFVGK--RNLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPD 517 (626)
Q Consensus 441 -~~~~~--~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~ 517 (626)
...+. ...+++++|.++.++|+|.+|+..+.+++.++|.++.+++++|.++..+|++++|+..|+++++++|++ ..
T Consensus 208 ~~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~-~~ 286 (368)
T 1fch_A 208 VRLDPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGY-IR 286 (368)
T ss_dssp HHHSTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HH
T ss_pred HHhCcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc-HH
Confidence 01111 356889999999999999999999999999999999999999999999999999999999999999997 67
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 006908 518 ATAALSKLKKQRQEVESK 535 (626)
Q Consensus 518 ~~~~l~~l~~~~~~~~~~ 535 (626)
+...+..+.....+..+.
T Consensus 287 ~~~~l~~~~~~~g~~~~A 304 (368)
T 1fch_A 287 SRYNLGISCINLGAHREA 304 (368)
T ss_dssp HHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHHCCCHHHH
Confidence 777888777665554443
No 178
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=98.90 E-value=6.6e-09 Score=102.73 Aligned_cols=129 Identities=16% Similarity=0.166 Sum_probs=104.3
Q ss_pred HHHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 006908 396 DEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLD 475 (626)
Q Consensus 396 ~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~ 475 (626)
..+..+...|..++..|+|++|+..|.+++.........+ ......++.++|.++..+|+|.+|+..+.+++.
T Consensus 41 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~-------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 113 (283)
T 3edt_B 41 DVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKD-------HPAVAATLNNLAVLYGKRGKYKEAEPLCKRALE 113 (283)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTT-------CHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCc-------chHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 4577788999999999999999999999998654322111 123467899999999999999999999999999
Q ss_pred h--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHH
Q 006908 476 A--------NPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKV--------DKSSEPDATAALSKLKKQRQEV 532 (626)
Q Consensus 476 ~--------dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l--------~P~~~~~~~~~l~~l~~~~~~~ 532 (626)
+ +|....+++++|.++..+|++++|+..|++++++ +|.. ..+...+..+.....+.
T Consensus 114 ~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~-~~~~~~la~~~~~~g~~ 185 (283)
T 3edt_B 114 IREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNV-AKTKNNLASCYLKQGKY 185 (283)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHH-HHHHHHHHHHHHHHTCH
T ss_pred HHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHH-HHHHHHHHHHHHHcCCH
Confidence 8 5777899999999999999999999999999998 4442 44556666665544433
No 179
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=98.90 E-value=1.8e-08 Score=102.36 Aligned_cols=121 Identities=13% Similarity=0.071 Sum_probs=104.3
Q ss_pred HHHHHhhhchhhccc-cHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 006908 398 AEKIRVTGNRLFKEG-KFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA 476 (626)
Q Consensus 398 a~~~k~~Gn~~f~~g-~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~ 476 (626)
+..+...|..++..| ++++|+..|++++. ..|.+ ..++.++|.++..+|+|.+|+..+.+++.+
T Consensus 90 ~~~~~~l~~~~~~~~~~~~~A~~~~~~a~~----~~~~~-----------~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 154 (330)
T 3hym_B 90 PVSWFAVGCYYLMVGHKNEHARRYLSKATT----LEKTY-----------GPAWIAYGHSFAVESEHDQAMAAYFTAAQL 154 (330)
T ss_dssp THHHHHHHHHHHHSCSCHHHHHHHHHHHHT----TCTTC-----------THHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHH----hCCcc-----------HHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 345667888999999 99999999999998 55654 457899999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Q 006908 477 NPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQEVES 534 (626)
Q Consensus 477 dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~~~~~~~~ 534 (626)
+|.+..+++.+|.++..+|++++|+..|+++++++|.+ ..+...+..+........+
T Consensus 155 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~~l~~~~~~~~~~~~ 211 (330)
T 3hym_B 155 MKGCHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPED-PFVMHEVGVVAFQNGEWKT 211 (330)
T ss_dssp TTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTC-HHHHHHHHHHHHHTTCHHH
T ss_pred ccccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCC-hHHHHHHHHHHHHcccHHH
Confidence 99999999999999999999999999999999999997 5677777776655444433
No 180
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=98.90 E-value=1.3e-08 Score=93.49 Aligned_cols=90 Identities=22% Similarity=0.206 Sum_probs=80.7
Q ss_pred hhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q 006908 446 RNLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKL 525 (626)
Q Consensus 446 ~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l 525 (626)
.+..++++|.+++++++|.+|+..|.+++.++|.++.+|+++|.+|..+|+|++|+.+|++|++++|++ ..+...+..+
T Consensus 10 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~lg~~ 88 (164)
T 3sz7_A 10 ESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKY-SKAWSRLGLA 88 (164)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC-HHHHHHHHHH
Confidence 356889999999999999999999999999999999999999999999999999999999999999998 6788888887
Q ss_pred HHHHHHHHHHH
Q 006908 526 KKQRQEVESKA 536 (626)
Q Consensus 526 ~~~~~~~~~~~ 536 (626)
...+.+..+..
T Consensus 89 ~~~~g~~~~A~ 99 (164)
T 3sz7_A 89 RFDMADYKGAK 99 (164)
T ss_dssp HHHTTCHHHHH
T ss_pred HHHccCHHHHH
Confidence 76665554443
No 181
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=98.89 E-value=4.4e-09 Score=97.96 Aligned_cols=114 Identities=17% Similarity=0.202 Sum_probs=78.8
Q ss_pred HHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHH---------------
Q 006908 401 IRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRK--------------- 465 (626)
Q Consensus 401 ~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~--------------- 465 (626)
+...|..++..|+|++|+..|++++. ..|.+ ..+++++|.++..+|++++
T Consensus 9 ~~~~a~~~~~~g~~~~A~~~~~~al~----~~P~~-----------~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p~~ 73 (176)
T 2r5s_A 9 LLKQVSELLQQGEHAQALNVIQTLSD----ELQSR-----------GDVKLAKADCLLETKQFELAQELLATIPLEYQDN 73 (176)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTSCH----HHHTS-----------HHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGCCH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHH----HCCCc-----------HHHHHHHHHHHHHCCCHHHHHHHHHHhhhccCCh
Confidence 34566666777777777777777766 33433 2244444444444444444
Q ss_pred -------------------HHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCH-HHHHHHHHHH
Q 006908 466 -------------------SIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSE-PDATAALSKL 525 (626)
Q Consensus 466 -------------------A~~~~~~aL~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~-~~~~~~l~~l 525 (626)
|+..+.++++++|+++.+++.+|.++..+|++++|+..|+++++++|++. ..++..+..+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~ 153 (176)
T 2r5s_A 74 SYKSLIAKLELHQQAAESPELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDI 153 (176)
T ss_dssp HHHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcccchHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHH
Confidence 45566667778899999999999999999999999999999999998742 3466666665
Q ss_pred HHHH
Q 006908 526 KKQR 529 (626)
Q Consensus 526 ~~~~ 529 (626)
....
T Consensus 154 ~~~~ 157 (176)
T 2r5s_A 154 LSAL 157 (176)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 5444
No 182
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.89 E-value=1.4e-09 Score=90.65 Aligned_cols=64 Identities=22% Similarity=0.473 Sum_probs=49.9
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC
Q 006908 451 LNVAACLLKLGECRKSIEACNKVLDANPAHVK-GLYRRGMAYMALGEFEEAQRDFEMMMKVDKSS 514 (626)
Q Consensus 451 ~Nla~~~~kl~~~~~A~~~~~~aL~~dp~~~k-a~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~ 514 (626)
+++|.++++.++|.+|+..|.++++++|.++. +++++|.++..+|++++|+..|+++++++|++
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~ 68 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDS 68 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTS
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCc
Confidence 45777777777777777777777777777777 77777777777777777777777777777776
No 183
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.88 E-value=8.4e-09 Score=111.16 Aligned_cols=122 Identities=16% Similarity=0.064 Sum_probs=98.1
Q ss_pred HHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 006908 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 477 (626)
Q Consensus 398 a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~d 477 (626)
+..+...|..++..|+|++|+.+|++|+.++....+.. .....+.+|.|+|.+|..+|+|.+|+.++.+++++.
T Consensus 51 a~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~------~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~ 124 (472)
T 4g1t_A 51 ATMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHADQ------AEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVC 124 (472)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGG------CTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccc------cchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHh
Confidence 55677899999999999999999999998654322211 112235689999999999999999999999999873
Q ss_pred --------CCCHHHHHHHHHHHHHcC--CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 006908 478 --------PAHVKGLYRRGMAYMALG--EFEEAQRDFEMMMKVDKSSEPDATAALSKLK 526 (626)
Q Consensus 478 --------p~~~ka~~~~g~a~~~lg--~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~ 526 (626)
+..+.++.++|.++..++ +|++|+.+|++|++++|++ +.+...+..+.
T Consensus 125 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~-~~~~~~~~~~~ 182 (472)
T 4g1t_A 125 EKFSSPYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKN-PEFTSGLAIAS 182 (472)
T ss_dssp HHSCCSSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTC-HHHHHHHHHHH
T ss_pred HhcccccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCC-HHHHHHHHHHH
Confidence 456889999999888765 6999999999999999998 66666665543
No 184
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.88 E-value=7.1e-09 Score=105.05 Aligned_cols=107 Identities=15% Similarity=0.144 Sum_probs=92.2
Q ss_pred HHHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 006908 396 DEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLD 475 (626)
Q Consensus 396 ~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~ 475 (626)
..+..+...|..++..|+|++|+.+|++|+..+..... + ....+.+++|+|.+|.++|+|.+|+.++.++++
T Consensus 153 ~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~-~-------~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~ 224 (293)
T 3u3w_A 153 QNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHD-N-------EEFDVKVRYNHAKALYLDSRYEESLYQVNKAIE 224 (293)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSC-C-------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhccc-c-------hhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 35667889999999999999999999999986654422 2 234567999999999999999999999999999
Q ss_pred hCCCC------HHHHHHHHHHHHHcC-CHHHHHHHHHHHHhc
Q 006908 476 ANPAH------VKGLYRRGMAYMALG-EFEEAQRDFEMMMKV 510 (626)
Q Consensus 476 ~dp~~------~ka~~~~g~a~~~lg-~~~eA~~~~~kAl~l 510 (626)
+.+.. +.+|+++|.++..+| .+++|+.+|++|+.+
T Consensus 225 ~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i 266 (293)
T 3u3w_A 225 ISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFF 266 (293)
T ss_dssp HHHHTTBCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHcCcHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHH
Confidence 87543 889999999999999 579999999999987
No 185
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.86 E-value=8.7e-09 Score=104.50 Aligned_cols=109 Identities=15% Similarity=0.097 Sum_probs=89.4
Q ss_pred HHHHHHhhhchhhcc-ccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 006908 397 EAEKIRVTGNRLFKE-GKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLD 475 (626)
Q Consensus 397 ~a~~~k~~Gn~~f~~-g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~ 475 (626)
.+..+...|..+... |+|++|+.+|++|+.+.+... + ......++.|+|.++.++|+|.+|+.+|.+++.
T Consensus 116 ~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~--~-------~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 186 (292)
T 1qqe_A 116 GANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQ--S-------VALSNKCFIKCADLKALDGQYIEASDIYSKLIK 186 (292)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTT--C-------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCC--C-------hHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 356778899999996 999999999999999543211 0 112246899999999999999999999999999
Q ss_pred hCCCCHH-------HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC
Q 006908 476 ANPAHVK-------GLYRRGMAYMALGEFEEAQRDFEMMMKVDKSS 514 (626)
Q Consensus 476 ~dp~~~k-------a~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~ 514 (626)
+.|.+.. +|+++|.++..+|++++|+.+|+++++++|++
T Consensus 187 ~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~ 232 (292)
T 1qqe_A 187 SSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNF 232 (292)
T ss_dssp TTSSCTTTGGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC----
T ss_pred HHhcCCcccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Confidence 9987642 78999999999999999999999999999986
No 186
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=98.86 E-value=2.2e-08 Score=97.21 Aligned_cols=126 Identities=15% Similarity=0.178 Sum_probs=99.4
Q ss_pred HHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHH------------------
Q 006908 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLK------------------ 459 (626)
Q Consensus 398 a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~k------------------ 459 (626)
...+...|..+++.|+|++|+..|++++. ..|.+.. ...+++++|.|+.+
T Consensus 41 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~----~~P~~~~--------~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 108 (225)
T 2yhc_A 41 QQVQLDLIYAYYKNADLPLAQAAIDRFIR----LNPTHPN--------IDYVMYMRGLTNMALDDSALQGFFGVDRSDRD 108 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTCTT--------HHHHHHHHHHHHHHHHC--------------C
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHH----HCcCCCc--------HHHHHHHHHHHHHhhhhhhhhhhhccchhhcC
Confidence 34677889999999999999999999999 5665531 12367778888876
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHH-----------------HHHHHHHHHcCCHHHHHHHHHHHHhcCCCCH--HHHHH
Q 006908 460 LGECRKSIEACNKVLDANPAHVKGL-----------------YRRGMAYMALGEFEEAQRDFEMMMKVDKSSE--PDATA 520 (626)
Q Consensus 460 l~~~~~A~~~~~~aL~~dp~~~ka~-----------------~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~--~~~~~ 520 (626)
++++.+|+..+.++++.+|++..++ +.+|.++...|+|++|+..|+++++..|++. ..+..
T Consensus 109 ~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~ 188 (225)
T 2yhc_A 109 PQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALP 188 (225)
T ss_dssp CHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTSHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCCCccHHHHH
Confidence 5789999999999999999987554 6789999999999999999999999999973 23455
Q ss_pred HHHHHHHHHHHHHHH
Q 006908 521 ALSKLKKQRQEVESK 535 (626)
Q Consensus 521 ~l~~l~~~~~~~~~~ 535 (626)
.+..+...+....+.
T Consensus 189 ~l~~~~~~~g~~~~A 203 (225)
T 2yhc_A 189 LMENAYRQMQMNAQA 203 (225)
T ss_dssp HHHHHHHHTTCHHHH
T ss_pred HHHHHHHHcCCcHHH
Confidence 555555554444433
No 187
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=98.85 E-value=2e-08 Score=81.65 Aligned_cols=84 Identities=26% Similarity=0.412 Sum_probs=75.8
Q ss_pred HHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 006908 397 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA 476 (626)
Q Consensus 397 ~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~ 476 (626)
.+..+...|..++..|+|++|+..|++++. ..|.+ ..++.++|.|+.+++++++|+..+.+++++
T Consensus 8 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~----~~~~~-----------~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 72 (91)
T 1na3_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALE----LDPNN-----------AEAWYNLGNAYYKQGDYDEAIEYYQKALEL 72 (91)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHh----cCCCC-----------HHHHHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 456778899999999999999999999999 45554 458899999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcC
Q 006908 477 NPAHVKGLYRRGMAYMALG 495 (626)
Q Consensus 477 dp~~~ka~~~~g~a~~~lg 495 (626)
+|.+..+++++|.++..+|
T Consensus 73 ~p~~~~~~~~l~~~~~~~g 91 (91)
T 1na3_A 73 DPNNAEAKQNLGNAKQKQG 91 (91)
T ss_dssp CTTCHHHHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHHHhcC
Confidence 9999999999999998765
No 188
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.84 E-value=2.2e-08 Score=107.28 Aligned_cols=123 Identities=10% Similarity=0.041 Sum_probs=97.4
Q ss_pred hhHHHHHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHH
Q 006908 392 DGIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACN 471 (626)
Q Consensus 392 ~e~~~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~ 471 (626)
.+.+..+....+.+...-+.|+|++|+..|+++|.........+ +...+..+.|+|.+|..+|+|++|+..+.
T Consensus 292 ~~~~~~~~~~le~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~-------Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~ 364 (433)
T 3qww_A 292 RDMVRYARNVIEEFRRAKHYKSPSELLEICELSQEKMSSVFEDS-------NVYMLHMMYQAMGVCLYMQDWEGALKYGQ 364 (433)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTTBCTT-------SHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHHHhhCccChh-------chHHHHHHHHHHHHHHhhcCHHHHHHHHH
Confidence 34444555556666666677899999999999999766544333 34467889999999999999999999999
Q ss_pred HHHHhC-----C---CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc-----CCCCHHHHHHHH
Q 006908 472 KVLDAN-----P---AHVKGLYRRGMAYMALGEFEEAQRDFEMMMKV-----DKSSEPDATAAL 522 (626)
Q Consensus 472 ~aL~~d-----p---~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l-----~P~~~~~~~~~l 522 (626)
++|++. | +-+.+|+++|.+|..+|+|++|+..|++|+++ .|++ +.+....
T Consensus 365 ~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~H-p~~~~l~ 427 (433)
T 3qww_A 365 KIIKPYSKHYPVYSLNVASMWLKLGRLYMGLENKAAGEKALKKAIAIMEVAHGKDH-PYISEIK 427 (433)
T ss_dssp HHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTC-HHHHHHH
T ss_pred HHHHHHHHHcCCCChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHcCCCC-hHHHHHH
Confidence 999763 3 44678999999999999999999999999987 5766 4444433
No 189
>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A
Probab=98.82 E-value=2.9e-09 Score=112.23 Aligned_cols=87 Identities=18% Similarity=0.119 Sum_probs=74.7
Q ss_pred CCCCCCCeEEEEEEEEeCCCcEEEecCCCccEEEEcCCCCccchHHHhhccCCCCcEEEEEEeCCccCCCCCCCCCCCcc
Q 006908 167 ETPRAPYEVKAWISAKTGDGKLILSHREGEPYFFTFGKSEVPKGLEMGIGTMTREEKAVIYVTSQYLTPSPLMPVVEGCE 246 (626)
Q Consensus 167 ~~~~~g~~V~v~y~~~~~~g~~~~s~~~~~p~~~~~g~g~~~~gle~~l~~mk~Ge~~~~~v~~~~~~g~~~~~~ip~~~ 246 (626)
..+..||.|++||+++ .+|+.|+++ .+.|+.|.+|.|+++|||+++|.||++|++++|.|+....|+... .++.
T Consensus 159 ~~~~~gD~V~i~y~g~-~dG~~fd~~-~~~~~~~~lG~g~~ipgfee~L~Gmk~Ge~~~v~v~fp~dy~~~~----laGk 232 (392)
T 1t11_A 159 EAAENGKRVSIDFVGS-IDGVEFEGG-KAENFPLEMGAGRMIPGFEDGIVGKTKGMEFVIDVTFPEDYHAEN----LKGK 232 (392)
T ss_dssp CCCCTTCEEEEEEEEE-SSSSCCTTC-EEEEEEEETTSCCBSTTSGGGTTTCCSSCCCCEEEECCTTCSCTT----TSSC
T ss_pred CCCCCCCEEEEEEEEE-ECCEEccCC-CccceEEEecCCCcchhHHHHhCCCCCCCEEEEEEeCccccccCC----CCCC
Confidence 4588999999999997 699999976 468999999999999999999999999999999998444566432 2678
Q ss_pred eEEEEEEEeeEEe
Q 006908 247 EVHFEVELVHLIQ 259 (626)
Q Consensus 247 ~l~~~v~l~~~~~ 259 (626)
+++|+|+|+++..
T Consensus 233 ~~~F~V~v~~i~~ 245 (392)
T 1t11_A 233 AAKFAIKVNKVEA 245 (392)
T ss_dssp EEEECCCEEEEEE
T ss_pred eEEEEEEEEEEEc
Confidence 9999999999853
No 190
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.81 E-value=3.6e-08 Score=88.32 Aligned_cols=108 Identities=19% Similarity=0.202 Sum_probs=92.5
Q ss_pred HHHHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 006908 395 MDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVL 474 (626)
Q Consensus 395 ~~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL 474 (626)
...+..+...|..++..|+|++|+..|.+++....... + ......++.++|.++..+|+|.+|+..+.+++
T Consensus 6 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~--~-------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~ 76 (164)
T 3ro3_A 6 AAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFG--D-------KAAERIAYSNLGNAYIFLGEFETASEYYKKTL 76 (164)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT--C-------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhC--C-------chHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 45678889999999999999999999999998654321 1 12335689999999999999999999999999
Q ss_pred HhCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC
Q 006908 475 DANPAH------VKGLYRRGMAYMALGEFEEAQRDFEMMMKVD 511 (626)
Q Consensus 475 ~~dp~~------~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~ 511 (626)
.+.+.. ..+++++|.++..+|++++|+..|++++++.
T Consensus 77 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~ 119 (164)
T 3ro3_A 77 LLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIA 119 (164)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 886543 6789999999999999999999999999874
No 191
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.81 E-value=3e-08 Score=82.44 Aligned_cols=61 Identities=13% Similarity=0.087 Sum_probs=55.0
Q ss_pred hhH-HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC
Q 006908 446 RNL-LHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSS 514 (626)
Q Consensus 446 ~~~-~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~ 514 (626)
... +++++|.|++++++|.+|+.++.++++++|++..++++ +.+.+|+..|++++.++|++
T Consensus 33 ~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~--------~~~~~a~~~~~~~~~~~p~~ 94 (99)
T 2kc7_A 33 GKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR--------KMVMDILNFYNKDMYNQLEH 94 (99)
T ss_dssp THHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH--------HHHHHHHHHHCCTTHHHHCC
T ss_pred cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH--------HHHHHHHHHHHHHhccCccc
Confidence 456 89999999999999999999999999999999999866 67888999999999888875
No 192
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.80 E-value=3.7e-08 Score=88.69 Aligned_cols=103 Identities=14% Similarity=0.180 Sum_probs=85.4
Q ss_pred cccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhC-C-CCHHHHH
Q 006908 411 EGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLG---ECRKSIEACNKVLDAN-P-AHVKGLY 485 (626)
Q Consensus 411 ~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~---~~~~A~~~~~~aL~~d-p-~~~ka~~ 485 (626)
......+.+.|.+++. ..+.+ ..+.+|+|.|+.+.+ ++.+++..++.+++.+ | .+..++|
T Consensus 11 ~~~l~~~~~~y~~e~~----~~~~~-----------~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY 75 (152)
T 1pc2_A 11 VEDLLKFEKKFQSEKA----AGSVS-----------KSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVF 75 (152)
T ss_dssp HHHHHHHHHHHHHHHH----TTCCC-----------HHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc----cCCCc-----------HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHH
Confidence 3455677788888876 33433 458899999999998 7789999999999999 7 6799999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q 006908 486 RRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQR 529 (626)
Q Consensus 486 ~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~~~ 529 (626)
++|.+|+++++|++|+++++++|+++|+| ..+......++.+.
T Consensus 76 ~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n-~QA~~Lk~~ie~~~ 118 (152)
T 1pc2_A 76 YLAVGNYRLKEYEKALKYVRGLLQTEPQN-NQAKELERLIDKAM 118 (152)
T ss_dssp HHHHHHHHTSCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHccCHHHHHHHHHHHHhcCCCC-HHHHHHHHHHHHHH
Confidence 99999999999999999999999999998 56766666665444
No 193
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=98.80 E-value=1.9e-08 Score=99.42 Aligned_cols=109 Identities=15% Similarity=0.124 Sum_probs=93.8
Q ss_pred HHHHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 006908 395 MDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVL 474 (626)
Q Consensus 395 ~~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL 474 (626)
...+..+...|..++..|+|++|+..|.+++.........+ ......++.|+|.++..+|+|++|+..+.+++
T Consensus 82 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~-------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 154 (283)
T 3edt_B 82 PAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKF-------HPDVAKQLNNLALLCQNQGKAEEVEYYYRRAL 154 (283)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTT-------CHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCC-------ChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 34567788899999999999999999999998654321111 12346789999999999999999999999999
Q ss_pred Hh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Q 006908 475 DA--------NPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKV 510 (626)
Q Consensus 475 ~~--------dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l 510 (626)
.+ .|..+.+++.+|.++..+|++++|+..|++++++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~ 198 (283)
T 3edt_B 155 EIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTR 198 (283)
T ss_dssp HHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 99 7778899999999999999999999999999987
No 194
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=98.80 E-value=5.3e-08 Score=85.69 Aligned_cols=87 Identities=14% Similarity=0.142 Sum_probs=78.4
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 006908 447 NLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLK 526 (626)
Q Consensus 447 ~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~ 526 (626)
...++++|.+++++++|.+|+..+.+++.++|.++.+++++|.++..+|++++|+..|+++++++|++ ..+...+..+.
T Consensus 9 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~-~~~~~~l~~~~ 87 (137)
T 3q49_B 9 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQS-VKAHFFLGQCQ 87 (137)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchh-HHHHHHHHHHH
Confidence 56899999999999999999999999999999999999999999999999999999999999999997 67777777776
Q ss_pred HHHHHHHH
Q 006908 527 KQRQEVES 534 (626)
Q Consensus 527 ~~~~~~~~ 534 (626)
.......+
T Consensus 88 ~~~~~~~~ 95 (137)
T 3q49_B 88 LEMESYDE 95 (137)
T ss_dssp HHTTCHHH
T ss_pred HHHhhHHH
Confidence 55554443
No 195
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.78 E-value=4.5e-08 Score=104.97 Aligned_cols=123 Identities=11% Similarity=0.086 Sum_probs=97.6
Q ss_pred HHHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 006908 396 DEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLD 475 (626)
Q Consensus 396 ~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~ 475 (626)
..+..+...-..+.++|+|++|+..|+++|.....+.+.+ +...+..+.|+|.+|..+|+|++|+..|.++|.
T Consensus 285 ~~~~~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~-------h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~ 357 (429)
T 3qwp_A 285 KEVQESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDI-------NIYQLKVLDCAMDACINLGLLEEALFYGTRTME 357 (429)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTT-------SHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCcc-------chHHHHHHHHHHHHHHhhccHHHHHHHHHHHHH
Confidence 3445555666677788999999999999998765544433 345678999999999999999999999999997
Q ss_pred hC-----CC---CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc-----CCCCHHHHHHHHHHHH
Q 006908 476 AN-----PA---HVKGLYRRGMAYMALGEFEEAQRDFEMMMKV-----DKSSEPDATAALSKLK 526 (626)
Q Consensus 476 ~d-----p~---~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l-----~P~~~~~~~~~l~~l~ 526 (626)
+. |+ -+..++++|.+|..+|+|++|+..|++|+++ .|++ +.+...+..+.
T Consensus 358 i~~~~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~H-p~~~~~~~~l~ 420 (429)
T 3qwp_A 358 PYRIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREH-SLIEDLILLLE 420 (429)
T ss_dssp HHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTS-HHHHHHHHHHH
T ss_pred hHHHHcCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCC-hHHHHHHHHHH
Confidence 63 33 4678999999999999999999999999987 5666 55554444443
No 196
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.78 E-value=3.1e-08 Score=110.23 Aligned_cols=102 Identities=10% Similarity=0.047 Sum_probs=95.1
Q ss_pred HHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 006908 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 477 (626)
Q Consensus 398 a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~d 477 (626)
+..+...|..++..|+|++|+..|++++. +.|.+ ..+++|+|.||.++|++++|+..+.++++++
T Consensus 57 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~----~~p~~-----------~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 121 (568)
T 2vsy_A 57 PEAVARLGRVRWTQQRHAEAAVLLQQASD----AAPEH-----------PGIALWLGHALEDAGQAEAAAAAYTRAHQLL 121 (568)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHh----cCCCC-----------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 45677899999999999999999999999 56665 4589999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHc---CCHHHHHHHHHHHHhcCCCC
Q 006908 478 PAHVKGLYRRGMAYMAL---GEFEEAQRDFEMMMKVDKSS 514 (626)
Q Consensus 478 p~~~ka~~~~g~a~~~l---g~~~eA~~~~~kAl~l~P~~ 514 (626)
|++..+++++|.++..+ |++++|++.|+++++++|++
T Consensus 122 p~~~~~~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~p~~ 161 (568)
T 2vsy_A 122 PEEPYITAQLLNWRRRLCDWRALDVLSAQVRAAVAQGVGA 161 (568)
T ss_dssp TTCHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHHTCCC
T ss_pred CCCHHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCCcc
Confidence 99999999999999999 99999999999999999986
No 197
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=98.78 E-value=4.7e-08 Score=106.83 Aligned_cols=133 Identities=15% Similarity=0.158 Sum_probs=96.7
Q ss_pred HHHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCC---------------hhH-HHH------HhhhhhHHHHHH
Q 006908 396 DEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQD---------------DEE-GKV------FVGKRNLLHLNV 453 (626)
Q Consensus 396 ~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~---------------~ee-~~~------~~~~~~~~~~Nl 453 (626)
..+..+...|..++..|++++|+..|++++.. .|.. .++ ... ..+....++.++
T Consensus 241 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l 316 (537)
T 3fp2_A 241 NAALALCYTGIFHFLKNNLLDAQVLLQESINL----HPTPNSYIFLALTLADKENSQEFFKFFQKAVDLNPEYPPTYYHR 316 (537)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----CCCHHHHHHHHHHTCCSSCCHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccHHHHHHHHHHHHhc----CCCchHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCHHHHHHH
Confidence 34556666666666677777777777666652 2220 000 000 111234578999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 006908 454 AACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQEVE 533 (626)
Q Consensus 454 a~~~~kl~~~~~A~~~~~~aL~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~~~~~~~ 533 (626)
|.++..+|+|.+|+..+.+++.++|.+..+++.+|.++..+|++++|+..|+++++++|++ ..+...+..+.....+..
T Consensus 317 ~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~-~~~~~~l~~~~~~~g~~~ 395 (537)
T 3fp2_A 317 GQMYFILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQGKFTESEAFFNETKLKFPTL-PEVPTFFAEILTDRGDFD 395 (537)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-THHHHHHHHHHHHTTCHH
T ss_pred HHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-hHHHHHHHHHHHHhCCHH
Confidence 9999999999999999999999999999999999999999999999999999999999987 567777766655444333
No 198
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=98.78 E-value=1.2e-07 Score=96.05 Aligned_cols=114 Identities=9% Similarity=0.130 Sum_probs=98.7
Q ss_pred hc-hhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Q 006908 405 GN-RLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKG 483 (626)
Q Consensus 405 Gn-~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~~~ka 483 (626)
|. .++..|++++|+..|++++. ..|.+ ..++.++|.++.++|++++|+..+.+++.++|.+..+
T Consensus 144 ~~~~~~~~~~~~~A~~~~~~~~~----~~~~~-----------~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~ 208 (327)
T 3cv0_A 144 EDFFFAAPNEYRECRTLLHAALE----MNPND-----------AQLHASLGVLYNLSNNYDSAAANLRRAVELRPDDAQL 208 (327)
T ss_dssp --CCTTSHHHHHHHHHHHHHHHH----HSTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HhHHHHHcccHHHHHHHHHHHHh----hCCCC-----------HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCcHHH
Confidence 44 58899999999999999998 45544 4588999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Q 006908 484 LYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQEVES 534 (626)
Q Consensus 484 ~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~~~~~~~~ 534 (626)
++.+|.++..+|++++|+..|+++++++|++ ..+...+..+.....+..+
T Consensus 209 ~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~-~~~~~~l~~~~~~~g~~~~ 258 (327)
T 3cv0_A 209 WNKLGATLANGNRPQEALDAYNRALDINPGY-VRVMYNMAVSYSNMSQYDL 258 (327)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC-HHHHHHHHHHHHHhccHHH
Confidence 9999999999999999999999999999997 5677777777655544443
No 199
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=98.74 E-value=3.4e-08 Score=82.99 Aligned_cols=86 Identities=19% Similarity=0.171 Sum_probs=76.5
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC--CHHHHHHHHHH
Q 006908 447 NLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKS--SEPDATAALSK 524 (626)
Q Consensus 447 ~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~--~~~~~~~~l~~ 524 (626)
..+++++|.+++.+++|.+|+..+.++++++|.+..+++++|.++..+|++++|+..|+++++++|. + ..+...+..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~-~~~~~~l~~ 84 (112)
T 2kck_A 6 PEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYN-KDVWAAKAD 84 (112)
T ss_dssp TTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTC-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccch-HHHHHHHHH
Confidence 3478889999999999999999999999999999999999999999999999999999999999999 7 567777777
Q ss_pred HHHHH-HHHH
Q 006908 525 LKKQR-QEVE 533 (626)
Q Consensus 525 l~~~~-~~~~ 533 (626)
+.... ....
T Consensus 85 ~~~~~~~~~~ 94 (112)
T 2kck_A 85 ALRYIEGKEV 94 (112)
T ss_dssp HHTTCSSCSH
T ss_pred HHHHHhCCHH
Confidence 76555 4433
No 200
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.74 E-value=4.6e-08 Score=99.90 Aligned_cols=107 Identities=10% Similarity=0.033 Sum_probs=89.2
Q ss_pred HHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 006908 397 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA 476 (626)
Q Consensus 397 ~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~ 476 (626)
.+..+...|..+.. |+|++|+.+|++|+.+..... + ......++.|+|.+|.++|+|.+|+.+|.+++.+
T Consensus 115 ~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~--~-------~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 184 (307)
T 2ifu_A 115 AAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEE--R-------LRQAAELIGKASRLLVRQQKFDEAAASLQKEKSM 184 (307)
T ss_dssp HHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTT--C-------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCC--C-------hhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 46677788888888 999999999999998544321 1 1123568999999999999999999999999998
Q ss_pred CCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC
Q 006908 477 NPAH------VKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSS 514 (626)
Q Consensus 477 dp~~------~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~ 514 (626)
.|.+ ..+++.+|.++..+|++++|+..|++++ ++|.+
T Consensus 185 ~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~ 227 (307)
T 2ifu_A 185 YKEMENYPTCYKKCIAQVLVQLHRADYVAAQKCVRESY-SIPGF 227 (307)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTS
T ss_pred HHHcCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCC
Confidence 7643 4589999999999999999999999999 99975
No 201
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.73 E-value=6.2e-08 Score=101.75 Aligned_cols=127 Identities=15% Similarity=0.144 Sum_probs=98.7
Q ss_pred HHHHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 006908 395 MDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVL 474 (626)
Q Consensus 395 ~~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL 474 (626)
...+..+...|..++..|+|.+|+.+|.+|+..+...... ....+.+++|+|.||..+|+|++|+.++.+|+
T Consensus 140 ~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~--------~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 211 (383)
T 3ulq_A 140 IEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAY--------NIRLLQCHSLFATNFLDLKQYEDAISHFQKAY 211 (383)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTT--------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccc--------hHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 4467788889999999999999999999999976543211 12346789999999999999999999999999
Q ss_pred HhCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhc-----C-CCCHHHHHHHHHHHHHHHH
Q 006908 475 DANPAH------VKGLYRRGMAYMALGEFEEAQRDFEMMMKV-----D-KSSEPDATAALSKLKKQRQ 530 (626)
Q Consensus 475 ~~dp~~------~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l-----~-P~~~~~~~~~l~~l~~~~~ 530 (626)
.+.+.. +.+++++|.+|..+|++++|+..|++|+++ + |.. ..+...+..+.....
T Consensus 212 ~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~-~~~~~~l~~~~~~~g 278 (383)
T 3ulq_A 212 SMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSL-PQAYFLITQIHYKLG 278 (383)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGH-HHHHHHHHHHHHHTT
T ss_pred HHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhH-HHHHHHHHHHHHHCC
Confidence 885433 368999999999999999999999999994 4 443 455666666554433
No 202
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=98.73 E-value=5.9e-08 Score=88.05 Aligned_cols=98 Identities=14% Similarity=0.096 Sum_probs=84.8
Q ss_pred HHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 006908 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 477 (626)
Q Consensus 398 a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~d 477 (626)
+..+...|..++..|+|++|+..|.+++. +.|.+ ..+++++|.|+..+|++.+|+..+.+++.++
T Consensus 47 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~----~~~~~-----------~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~ 111 (166)
T 1a17_A 47 AIYYGNRSLAYLRTECYGYALGDATRAIE----LDKKY-----------IKGYYRRAASNMALGKFRAALRDYETVVKVK 111 (166)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCccc-----------HHHHHHHHHHHHHhccHHHHHHHHHHHHHhC
Confidence 45567889999999999999999999999 45554 4589999999999999999999999999999
Q ss_pred CCCHHHHHHH--HHHHHHcCCHHHHHHHHHHHHhc
Q 006908 478 PAHVKGLYRR--GMAYMALGEFEEAQRDFEMMMKV 510 (626)
Q Consensus 478 p~~~ka~~~~--g~a~~~lg~~~eA~~~~~kAl~l 510 (626)
|.+..++..+ +..+..+|++++|+..+.++..+
T Consensus 112 p~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 146 (166)
T 1a17_A 112 PHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSV 146 (166)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHcccchHHH
Confidence 9999888554 44488889999999999887654
No 203
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=98.73 E-value=4.5e-08 Score=89.57 Aligned_cols=89 Identities=12% Similarity=0.174 Sum_probs=78.4
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------------------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 006908 447 NLLHLNVAACLLKLGECRKSIEACNKVLDA------------------NPAHVKGLYRRGMAYMALGEFEEAQRDFEMMM 508 (626)
Q Consensus 447 ~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~------------------dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl 508 (626)
+..+.++|.++++.|+|.+|+..|.++|.+ +|.++.+|+++|.||..+|+|++|+.+|++|+
T Consensus 11 a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al 90 (162)
T 3rkv_A 11 VEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEVL 90 (162)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 567889999999999999999999999999 78888999999999999999999999999999
Q ss_pred hcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 006908 509 KVDKSSEPDATAALSKLKKQRQEVESKA 536 (626)
Q Consensus 509 ~l~P~~~~~~~~~l~~l~~~~~~~~~~~ 536 (626)
+++|++ ..+...+..+...+....+..
T Consensus 91 ~~~p~~-~~a~~~~g~~~~~~g~~~~A~ 117 (162)
T 3rkv_A 91 KREETN-EKALFRRAKARIAAWKLDEAE 117 (162)
T ss_dssp HHSTTC-HHHHHHHHHHHHHTTCHHHHH
T ss_pred hcCCcc-hHHHHHHHHHHHHHhcHHHHH
Confidence 999998 567777777766665555443
No 204
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.72 E-value=3.6e-08 Score=99.81 Aligned_cols=107 Identities=14% Similarity=0.123 Sum_probs=89.9
Q ss_pred HHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 006908 397 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA 476 (626)
Q Consensus 397 ~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~ 476 (626)
.+..+...|..++..|+|++|+.+|++|+...... +.+. .....+++|+|.+|.++|+|++|+.++.+++.+
T Consensus 154 ~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~-~~~~-------~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~ 225 (293)
T 2qfc_A 154 NLYIENAIANIYAENGYLKKGIDLFEQILKQLEAL-HDNE-------EFDVKVRYNHAKALYLDSRYEESLYQVNKAIEI 225 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS-CCCH-------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc-Cccc-------cchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 46788899999999999999999999999755432 2221 122368999999999999999999999999988
Q ss_pred CCC------CHHHHHHHHHHHHHcCCHHHH-HHHHHHHHhcC
Q 006908 477 NPA------HVKGLYRRGMAYMALGEFEEA-QRDFEMMMKVD 511 (626)
Q Consensus 477 dp~------~~ka~~~~g~a~~~lg~~~eA-~~~~~kAl~l~ 511 (626)
.+. .+.+|+++|.++..+|++++| ..+|++|+.+.
T Consensus 226 ~~~~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~ 267 (293)
T 2qfc_A 226 SCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp HHHTTBCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHhcCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHH
Confidence 643 278999999999999999999 88899999873
No 205
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=98.72 E-value=7.5e-08 Score=106.90 Aligned_cols=116 Identities=13% Similarity=0.102 Sum_probs=89.2
Q ss_pred HHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 006908 401 IRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANPAH 480 (626)
Q Consensus 401 ~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~~ 480 (626)
+...|..+++.|++++|+..|++++....... .++ .....+|.++|.++.++|++++|+..+.++++++|.+
T Consensus 478 ~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~-~~p-------~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~ 549 (597)
T 2xpi_A 478 LNELGVVAFNKSDMQTAINHFQNALLLVKKTQ-SNE-------KPWAATWANLGHAYRKLKMYDAAIDALNQGLLLSTND 549 (597)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSC-CCS-------GGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSCC
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHhhhccc-cch-------hhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC
Confidence 44455555556666666666666555322110 000 0014689999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q 006908 481 VKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKL 525 (626)
Q Consensus 481 ~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l 525 (626)
+.+|+.+|.+|..+|++++|+..|+++++++|++ ..+...|..+
T Consensus 550 ~~~~~~l~~~~~~~g~~~~A~~~~~~~l~~~p~~-~~~~~~l~~~ 593 (597)
T 2xpi_A 550 ANVHTAIALVYLHKKIPGLAITHLHESLAISPNE-IMASDLLKRA 593 (597)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHT
T ss_pred hHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCC-hHHHHHHHHH
Confidence 9999999999999999999999999999999998 5666666554
No 206
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.71 E-value=6.8e-08 Score=101.83 Aligned_cols=125 Identities=17% Similarity=0.220 Sum_probs=102.9
Q ss_pred HHHHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 006908 395 MDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVL 474 (626)
Q Consensus 395 ~~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL 474 (626)
...+..+...|..++..|+|++|+..|++++. +.|.+. .....+++++|.+|+.+|+|.+|+..+.+++
T Consensus 45 ~~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~----~~~~~~-------~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 113 (411)
T 4a1s_A 45 SSMCLELALEGERLCNAGDCRAGVAFFQAAIQ----AGTEDL-------RTLSAIYSQLGNAYFYLGDYNKAMQYHKHDL 113 (411)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCCSCH-------HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHH----hcccCh-------hHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 45678888999999999999999999999999 455552 2335689999999999999999999999999
Q ss_pred Hh------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC------CCCHHHHHHHHHHHHHHHHH
Q 006908 475 DA------NPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVD------KSSEPDATAALSKLKKQRQE 531 (626)
Q Consensus 475 ~~------dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~------P~~~~~~~~~l~~l~~~~~~ 531 (626)
.+ +|..+.+++++|.++..+|++++|+..|++++.+. |. ...+...+..+......
T Consensus 114 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~-~~~~~~~l~~~~~~~g~ 181 (411)
T 4a1s_A 114 TLAKSMNDRLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLS-EGRALYNLGNVYHAKGK 181 (411)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHH-HHHHHHHHHHHHHHHHH
T ss_pred HHHHHccCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHH-HHHHHHHHHHHHHHcCc
Confidence 98 57788999999999999999999999999999983 22 23355555555544444
No 207
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.71 E-value=5.8e-08 Score=101.92 Aligned_cols=108 Identities=14% Similarity=0.070 Sum_probs=95.4
Q ss_pred HHHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 006908 396 DEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLD 475 (626)
Q Consensus 396 ~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~ 475 (626)
..+..+...|..++..|+|++|+..|.+|+....... + ....+.+++|+|.||..+|+|++|+.++.+++.
T Consensus 180 ~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~--~-------~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~ 250 (378)
T 3q15_A 180 RTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQ--N-------DRFIAISLLNIANSYDRSGDDQMAVEHFQKAAK 250 (378)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--C-------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcC--C-------HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 4677888999999999999999999999999654332 1 123467899999999999999999999999999
Q ss_pred -----hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCC
Q 006908 476 -----ANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDK 512 (626)
Q Consensus 476 -----~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P 512 (626)
.+|..+.+++++|.++..+|++++|+..|++|+++.+
T Consensus 251 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 292 (378)
T 3q15_A 251 VSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHIT 292 (378)
T ss_dssp HHHHHCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred HHHhhCChhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 7788899999999999999999999999999999854
No 208
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.71 E-value=2.6e-08 Score=101.74 Aligned_cols=109 Identities=10% Similarity=0.021 Sum_probs=91.8
Q ss_pred HHHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 006908 396 DEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLD 475 (626)
Q Consensus 396 ~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~ 475 (626)
..+..+.+.|+.+.+.|+|++|+.+|++|+.+..... + ....+.++.|+|.+|.. ++|++|+.++.+|+.
T Consensus 74 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g--~-------~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~ 143 (307)
T 2ifu_A 74 HAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENG--T-------PDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAA 143 (307)
T ss_dssp HHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTT--C-------HHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcC--C-------HHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHH
Confidence 3466788889999999999999999999998654321 1 11235689999999999 999999999999999
Q ss_pred hCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC
Q 006908 476 ANPAH------VKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSS 514 (626)
Q Consensus 476 ~dp~~------~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~ 514 (626)
+.+.. ..+++++|.+|..+|+|++|+..|++++++.|.+
T Consensus 144 ~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 188 (307)
T 2ifu_A 144 VFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEM 188 (307)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc
Confidence 87643 6899999999999999999999999999986643
No 209
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=98.70 E-value=5.4e-08 Score=105.46 Aligned_cols=116 Identities=13% Similarity=0.100 Sum_probs=88.5
Q ss_pred HHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHH---cCCHHHHHHHHHHHHHhC
Q 006908 401 IRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLK---LGECRKSIEACNKVLDAN 477 (626)
Q Consensus 401 ~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~k---l~~~~~A~~~~~~aL~~d 477 (626)
+...|..++..|++++|+..|.+++...+ .+.. ......+++++|.++.+ +|++.+|+..+.+++.++
T Consensus 375 ~~~la~~~~~~~~~~~A~~~~~~a~~~~~----~~~~-----~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~~ 445 (514)
T 2gw1_A 375 PNFFAEILTDKNDFDKALKQYDLAIELEN----KLDG-----IYVGIAPLVGKATLLTRNPTVENFIEATNLLEKASKLD 445 (514)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHH----TSSS-----CSSCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHhhh----ccch-----HHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHhC
Confidence 33455555566666666666666655221 1100 00113389999999999 999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 006908 478 PAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLK 526 (626)
Q Consensus 478 p~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~ 526 (626)
|++..+++.+|.++..+|++++|+..|+++++++|++ ..+...+..+.
T Consensus 446 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~-~~~~~~~~~~~ 493 (514)
T 2gw1_A 446 PRSEQAKIGLAQMKLQQEDIDEAITLFEESADLARTM-EEKLQAITFAE 493 (514)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSH-HHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhcccc-HHHHHHHHHHH
Confidence 9999999999999999999999999999999999986 56666665443
No 210
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.69 E-value=5.3e-08 Score=98.51 Aligned_cols=124 Identities=14% Similarity=0.104 Sum_probs=95.9
Q ss_pred HHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-
Q 006908 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA- 476 (626)
Q Consensus 398 a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~- 476 (626)
+..+...|..++..++|++|+..|++|+....... + ....+.+++|+|.+|..+|+|++|+.++.++|++
T Consensus 115 ~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~--~-------~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~ 185 (293)
T 3u3w_A 115 LQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGI--D-------VYQNLYIENAIANIYAENGYLKKGIDLFEQILKQL 185 (293)
T ss_dssp HHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCS--C-------TTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccc--c-------HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 44555688888999999999999999998432211 1 0123558999999999999999999999999953
Q ss_pred ------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC-----HHHHHHHHHHHHHHHH
Q 006908 477 ------NPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSS-----EPDATAALSKLKKQRQ 530 (626)
Q Consensus 477 ------dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~-----~~~~~~~l~~l~~~~~ 530 (626)
.+..+.+++++|.+|..+|+|++|+..|++|+++.+.. ...+...+..+...+.
T Consensus 186 ~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g 250 (293)
T 3u3w_A 186 EALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLE 250 (293)
T ss_dssp HHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTT
T ss_pred HhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhC
Confidence 22346799999999999999999999999999986432 1456666666665554
No 211
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.68 E-value=8.6e-08 Score=100.64 Aligned_cols=108 Identities=10% Similarity=0.106 Sum_probs=94.4
Q ss_pred HHHHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 006908 395 MDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVL 474 (626)
Q Consensus 395 ~~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL 474 (626)
...+..+...|..++..|+|++|+..|.+|+....... + ....+.++.|+|.||..+|+|++|+.++.+++
T Consensus 181 ~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~--~-------~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al 251 (383)
T 3ulq_A 181 IRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEK--Q-------PQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAI 251 (383)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--C-------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcC--C-------hHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 44567788899999999999999999999999655331 1 22346789999999999999999999999999
Q ss_pred H-----hC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC
Q 006908 475 D-----AN-PAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVD 511 (626)
Q Consensus 475 ~-----~d-p~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~ 511 (626)
. .+ |..+.+++++|.++..+|++++|+..|++|+++.
T Consensus 252 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 294 (383)
T 3ulq_A 252 AVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYS 294 (383)
T ss_dssp HHHHHTTCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHhhccchhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 9 46 7889999999999999999999999999999984
No 212
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.67 E-value=2.4e-07 Score=78.31 Aligned_cols=87 Identities=11% Similarity=0.103 Sum_probs=77.2
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 006908 447 NLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLK 526 (626)
Q Consensus 447 ~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~ 526 (626)
+..++++|.+++..++|.+|+..+.+++..+|.++.+++++|.++..+|++++|+..|+++++++|++ ..+...+..+.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~-~~~~~~~a~~~ 82 (118)
T 1elw_A 4 VNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDW-GKGYSRKAAAL 82 (118)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCccc-HHHHHHHHHHH
Confidence 45788999999999999999999999999999999999999999999999999999999999999997 56777777766
Q ss_pred HHHHHHHH
Q 006908 527 KQRQEVES 534 (626)
Q Consensus 527 ~~~~~~~~ 534 (626)
.......+
T Consensus 83 ~~~~~~~~ 90 (118)
T 1elw_A 83 EFLNRFEE 90 (118)
T ss_dssp HHTTCHHH
T ss_pred HHHhhHHH
Confidence 55544443
No 213
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.66 E-value=1.4e-07 Score=84.51 Aligned_cols=108 Identities=22% Similarity=0.244 Sum_probs=90.8
Q ss_pred HHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 006908 397 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA 476 (626)
Q Consensus 397 ~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~ 476 (626)
.+..+...|..++..|+|++|+..|.+++....... + ......++.++|.++..+++|++|+..+.+++.+
T Consensus 48 ~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~--~-------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 118 (164)
T 3ro3_A 48 ERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLK--D-------RAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAI 118 (164)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--C-------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhC--C-------cHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 456778899999999999999999999999655332 1 1234668999999999999999999999999987
Q ss_pred CC------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC
Q 006908 477 NP------AHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKS 513 (626)
Q Consensus 477 dp------~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~ 513 (626)
.+ ..+.+++.+|.++..+|++++|+..|++++++...
T Consensus 119 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 119 AQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHccchHhHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 43 22678999999999999999999999999987543
No 214
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.66 E-value=5.1e-07 Score=91.20 Aligned_cols=123 Identities=13% Similarity=0.088 Sum_probs=92.7
Q ss_pred HHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHH---H
Q 006908 399 EKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVL---D 475 (626)
Q Consensus 399 ~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL---~ 475 (626)
..+...|..+...|+|++|+..|.+|+......... .....+++|+|.+|..+|+|++|+.++.+|+ .
T Consensus 116 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~---------~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~ 186 (293)
T 2qfc_A 116 QWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDV---------YQNLYIENAIANIYAENGYLKKGIDLFEQILKQLE 186 (293)
T ss_dssp HHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCT---------THHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCch---------HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 334557777788889999999999999743321111 1135689999999999999999999999999 4
Q ss_pred hCCCC----HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC-----HHHHHHHHHHHHHHHH
Q 006908 476 ANPAH----VKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSS-----EPDATAALSKLKKQRQ 530 (626)
Q Consensus 476 ~dp~~----~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~-----~~~~~~~l~~l~~~~~ 530 (626)
..|.+ +.+++++|.+|..+|+|++|+..|++|+++.+.. ...+...+..+...+.
T Consensus 187 ~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~~g 250 (293)
T 2qfc_A 187 ALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLE 250 (293)
T ss_dssp HSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHHTT
T ss_pred hcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHcC
Confidence 45654 3799999999999999999999999999985321 1345555665554443
No 215
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.66 E-value=1.8e-07 Score=88.04 Aligned_cols=106 Identities=11% Similarity=0.121 Sum_probs=90.8
Q ss_pred HHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 006908 397 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA 476 (626)
Q Consensus 397 ~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~ 476 (626)
.+..+...|..++..|+|++|+..|.+++........ ......+++|+|.++..+|+|.+|+..+.+++.+
T Consensus 25 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 95 (203)
T 3gw4_A 25 ASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGD---------HTAEHRALHQVGMVERMAGNWDAARRCFLEEREL 95 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCC---------cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 4677888999999999999999999999997654321 1234678999999999999999999999999998
Q ss_pred ---CC----CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC
Q 006908 477 ---NP----AHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVD 511 (626)
Q Consensus 477 ---dp----~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~ 511 (626)
.+ ....+++++|.++..+|++++|+..|++++.+.
T Consensus 96 ~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 137 (203)
T 3gw4_A 96 LASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYA 137 (203)
T ss_dssp HHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 33 336789999999999999999999999999873
No 216
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=98.66 E-value=7.2e-08 Score=96.87 Aligned_cols=129 Identities=16% Similarity=0.187 Sum_probs=101.6
Q ss_pred HHHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 006908 396 DEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLD 475 (626)
Q Consensus 396 ~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~ 475 (626)
..+..+...|..++..|+|++|+..|.+++.........+ ......++.++|.++..+|+|.+|+..+.+++.
T Consensus 67 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~-------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~ 139 (311)
T 3nf1_A 67 DVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKD-------HPAVAATLNNLAVLYGKRGKYKEAEPLCKRALE 139 (311)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTT-------CHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCC-------ChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHH
Confidence 3466778899999999999999999999998643321111 123466899999999999999999999999998
Q ss_pred hC--------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHH
Q 006908 476 AN--------PAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKV--------DKSSEPDATAALSKLKKQRQEV 532 (626)
Q Consensus 476 ~d--------p~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l--------~P~~~~~~~~~l~~l~~~~~~~ 532 (626)
+. |....+++++|.++..+|++++|+..|++++.+ +|.. ..+...+..+.....+.
T Consensus 140 ~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~-~~~~~~la~~~~~~g~~ 211 (311)
T 3nf1_A 140 IREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNV-AKTKNNLASCYLKQGKF 211 (311)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHH-HHHHHHHHHHHHHHTCH
T ss_pred HHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHH-HHHHHHHHHHHHHcCCH
Confidence 84 566889999999999999999999999999998 4432 34555566555444433
No 217
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=98.64 E-value=1.8e-07 Score=81.20 Aligned_cols=88 Identities=16% Similarity=0.211 Sum_probs=78.2
Q ss_pred hhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q 006908 446 RNLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKL 525 (626)
Q Consensus 446 ~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l 525 (626)
....++++|.+++..++|.+|+..+.+++.++|.+..+++.+|.++..++++++|+..|+++++++|.+ ..+...+..+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~-~~~~~~la~~ 93 (133)
T 2lni_A 15 LALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTF-IKGYTRKAAA 93 (133)
T ss_dssp HHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCc-hHHHHHHHHH
Confidence 356899999999999999999999999999999999999999999999999999999999999999997 5677777776
Q ss_pred HHHHHHHHH
Q 006908 526 KKQRQEVES 534 (626)
Q Consensus 526 ~~~~~~~~~ 534 (626)
.....+..+
T Consensus 94 ~~~~~~~~~ 102 (133)
T 2lni_A 94 LEAMKDYTK 102 (133)
T ss_dssp HHHTTCHHH
T ss_pred HHHHhhHHH
Confidence 655544443
No 218
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.64 E-value=1.2e-07 Score=99.44 Aligned_cols=132 Identities=12% Similarity=0.044 Sum_probs=104.4
Q ss_pred HHHHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 006908 395 MDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVL 474 (626)
Q Consensus 395 ~~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL 474 (626)
...+..+...|..++..|++..|+.+|.+|+..+...... ....+.+++|+|.||..+|+|++|+.++.+|+
T Consensus 138 ~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~--------~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al 209 (378)
T 3q15_A 138 IEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLY--------SIRTIQSLFVIAGNYDDFKHYDKALPHLEAAL 209 (378)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTC--------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCc--------hhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 4567778888888999999999999999998865533211 11346789999999999999999999999999
Q ss_pred HhCC------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHH
Q 006908 475 DANP------AHVKGLYRRGMAYMALGEFEEAQRDFEMMMK-----VDKSSEPDATAALSKLKKQRQEVESK 535 (626)
Q Consensus 475 ~~dp------~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~-----l~P~~~~~~~~~l~~l~~~~~~~~~~ 535 (626)
.+.+ ..+.+++++|.+|..+|++++|+..|++|++ .+|.. ..+...+..+.....+..++
T Consensus 210 ~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~-~~~~~~la~~~~~~g~~~~A 280 (378)
T 3q15_A 210 ELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLL-PKVLFGLSWTLCKAGQTQKA 280 (378)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGH-HHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhH-HHHHHHHHHHHHHCCCHHHH
Confidence 8743 2357899999999999999999999999999 66665 56777777776655544433
No 219
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.64 E-value=1.1e-07 Score=95.90 Aligned_cols=105 Identities=18% Similarity=0.254 Sum_probs=91.6
Q ss_pred HHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-
Q 006908 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA- 476 (626)
Q Consensus 398 a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~- 476 (626)
+..+...|..++..|+|++|+..|++++. ..|.+. .....++.++|.+++.+|+|.+|+..+.+++.+
T Consensus 5 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~----~~~~~~-------~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 73 (338)
T 3ro2_A 5 CLELALEGERLCKSGDCRAGVSFFEAAVQ----VGTEDL-------KTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLA 73 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCCSCH-------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHh----hCcccH-------HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHh
Confidence 55677899999999999999999999999 455542 233568999999999999999999999999987
Q ss_pred -----CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC
Q 006908 477 -----NPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKS 513 (626)
Q Consensus 477 -----dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~ 513 (626)
.|..+.+++.+|.++..+|++++|+..|++++++.|.
T Consensus 74 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 115 (338)
T 3ro2_A 74 RTIGDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRE 115 (338)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred hcccccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 4556889999999999999999999999999998553
No 220
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=98.64 E-value=2.3e-07 Score=102.97 Aligned_cols=120 Identities=17% Similarity=0.120 Sum_probs=99.8
Q ss_pred HHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 006908 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 477 (626)
Q Consensus 398 a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~d 477 (626)
+..+...|..+++.|++++|+..|++++. +.|.+ ..+|++++.+|.+.|++++|+..+.+++.++
T Consensus 373 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~----~~~~~-----------~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~ 437 (597)
T 2xpi_A 373 AVTWLAVGIYYLCVNKISEARRYFSKSST----MDPQF-----------GPAWIGFAHSFAIEGEHDQAISAYTTAARLF 437 (597)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHH----hCCCC-----------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 34556678888899999999999999988 45544 4578899999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 006908 478 PAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQEVE 533 (626)
Q Consensus 478 p~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~~~~~~~ 533 (626)
|.+..+++.+|.+|...|++++|+..|+++++++|.+ ..+...+..+........
T Consensus 438 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~-~~~~~~l~~~~~~~g~~~ 492 (597)
T 2xpi_A 438 QGTHLPYLFLGMQHMQLGNILLANEYLQSSYALFQYD-PLLLNELGVVAFNKSDMQ 492 (597)
T ss_dssp TTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHTTCHH
T ss_pred ccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-hHHHHHHHHHHHHhCCHH
Confidence 9999999999999999999999999999999999987 566666666655444333
No 221
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=98.63 E-value=1.3e-07 Score=95.03 Aligned_cols=108 Identities=17% Similarity=0.160 Sum_probs=92.0
Q ss_pred HHHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 006908 396 DEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLD 475 (626)
Q Consensus 396 ~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~ 475 (626)
..+..+...|..++..|+|++|+..|.+++.........+ ......++.++|.++..+|+|.+|+..+.+++.
T Consensus 109 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~-------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~ 181 (311)
T 3nf1_A 109 AVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKD-------HPDVAKQLNNLALLCQNQGKYEEVEYYYQRALE 181 (311)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTT-------CHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCC-------ChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3466778899999999999999999999998543221111 123456899999999999999999999999999
Q ss_pred h--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Q 006908 476 A--------NPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKV 510 (626)
Q Consensus 476 ~--------dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l 510 (626)
+ +|....+++.+|.++..+|++++|+..|++++++
T Consensus 182 ~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 224 (311)
T 3nf1_A 182 IYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTR 224 (311)
T ss_dssp HHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 8 7777889999999999999999999999999986
No 222
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.63 E-value=2.3e-08 Score=109.01 Aligned_cols=102 Identities=14% Similarity=0.121 Sum_probs=88.7
Q ss_pred HHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 006908 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 477 (626)
Q Consensus 398 a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~d 477 (626)
+..+...|..+++.|+|++|+..|++|+. +.|.+ ..+++|+|.+|.++|+|++|+..+.++++++
T Consensus 40 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~----l~p~~-----------~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~ 104 (477)
T 1wao_1 40 AIYYGNRSLAYLRTECYGYALGDATRAIE----LDKKY-----------IKGYYRRAASNMALGKFRAALRDYETVVKVK 104 (477)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----SCTTC-----------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHH----hCCCC-----------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 56677899999999999999999999999 67765 4589999999999999999999999999999
Q ss_pred CCCHHHHHHHHHH--HHHcCCHHHHHHHHH-----------HHHhcCCCC
Q 006908 478 PAHVKGLYRRGMA--YMALGEFEEAQRDFE-----------MMMKVDKSS 514 (626)
Q Consensus 478 p~~~ka~~~~g~a--~~~lg~~~eA~~~~~-----------kAl~l~P~~ 514 (626)
|++..+++.++.+ +..+|++++|++.++ +++.++|+.
T Consensus 105 p~~~~~~~~l~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~~ 154 (477)
T 1wao_1 105 PHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEY 154 (477)
T ss_dssp TTCTTHHHHHHHHHHHHHHHHHCCC------CCSTTTCCTTSSCCCCTTC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHhccccccchhHhhhhhhhccccccc
Confidence 9999999999999 889999999999999 888887754
No 223
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.60 E-value=1.5e-07 Score=98.51 Aligned_cols=105 Identities=18% Similarity=0.254 Sum_probs=91.7
Q ss_pred HHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-
Q 006908 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA- 476 (626)
Q Consensus 398 a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~- 476 (626)
+..+...|..++..|+|++|+..|++++. ..|.+. .....++.++|.+++.+|+|.+|+..+.+++.+
T Consensus 9 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~----~~~~~~-------~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 77 (406)
T 3sf4_A 9 CLELALEGERLCKSGDCRAGVSFFEAAVQ----VGTEDL-------KTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLA 77 (406)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCCSCH-------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHh----cCcccH-------HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 55677899999999999999999999999 455542 234568999999999999999999999999987
Q ss_pred -----CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC
Q 006908 477 -----NPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKS 513 (626)
Q Consensus 477 -----dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~ 513 (626)
.|..+.+++++|.++..+|++++|+..|++|+++.|.
T Consensus 78 ~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 119 (406)
T 3sf4_A 78 RTIGDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRE 119 (406)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HhccccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh
Confidence 3556889999999999999999999999999998653
No 224
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.59 E-value=1.6e-07 Score=101.01 Aligned_cols=119 Identities=11% Similarity=0.036 Sum_probs=94.7
Q ss_pred HHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcC--CHHHHHHHHHHHHH
Q 006908 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLG--ECRKSIEACNKVLD 475 (626)
Q Consensus 398 a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~--~~~~A~~~~~~aL~ 475 (626)
+..+.+.|..++..|+|++|+.+|++++.+........ ......+++|+|.++++++ +|++|+.+|.+||+
T Consensus 94 ~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~-------~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~ 166 (472)
T 4g1t_A 94 LVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPY-------RIESPELDCEEGWTRLKCGGNQNERAKVCFEKALE 166 (472)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSS-------CCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhccccc-------chhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHH
Confidence 44566789999999999999999999998655432111 1112457888998888765 69999999999999
Q ss_pred hCCCCHHHHHHHHHHHHH---cCCHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Q 006908 476 ANPAHVKGLYRRGMAYMA---LGEFEEAQRDFEMMMKVDKSSEPDATAALSK 524 (626)
Q Consensus 476 ~dp~~~ka~~~~g~a~~~---lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~ 524 (626)
++|+++.+++.+|.++.. .+++++|+..|++|++++|++ ..+...+..
T Consensus 167 ~~p~~~~~~~~~~~~~~~l~~~~~~~~al~~~~~al~l~p~~-~~~~~~l~~ 217 (472)
T 4g1t_A 167 KKPKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDN-QYLKVLLAL 217 (472)
T ss_dssp HSTTCHHHHHHHHHHHHHHHHSCCCCCTHHHHHHHHHHCSSC-HHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhhcCCcc-hHHHHHHHH
Confidence 999999999999998654 577789999999999999997 555555543
No 225
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.59 E-value=3.1e-07 Score=79.71 Aligned_cols=96 Identities=19% Similarity=0.215 Sum_probs=77.6
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCH--HHHHHHHH
Q 006908 449 LHLNVAACLLKLGECRKSIEACNKVLDANPAHV---KGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSE--PDATAALS 523 (626)
Q Consensus 449 ~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~~~---ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~--~~~~~~l~ 523 (626)
.++++|.+++..|+|.+|+..+.+++..+|++. .+++++|.++..+|+|++|+..|++++.++|++. ..+...+.
T Consensus 4 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la 83 (129)
T 2xev_A 4 TAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLG 83 (129)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHHH
Confidence 578899999999999999999999999999998 8999999999999999999999999999999863 34566666
Q ss_pred HHHHHHHHHHHHHHHHHHcccc
Q 006908 524 KLKKQRQEVESKARKQFKGLFD 545 (626)
Q Consensus 524 ~l~~~~~~~~~~~~~~~~~~~~ 545 (626)
.+.....+..+.. ..+.+...
T Consensus 84 ~~~~~~g~~~~A~-~~~~~~~~ 104 (129)
T 2xev_A 84 LSQYGEGKNTEAQ-QTLQQVAT 104 (129)
T ss_dssp HHHHHTTCHHHHH-HHHHHHHH
T ss_pred HHHHHcCCHHHHH-HHHHHHHH
Confidence 6655444433332 33444443
No 226
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=98.58 E-value=1.4e-07 Score=89.29 Aligned_cols=89 Identities=15% Similarity=0.059 Sum_probs=78.0
Q ss_pred hhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH----------------HHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 006908 446 RNLLHLNVAACLLKLGECRKSIEACNKVLDANPAHV----------------KGLYRRGMAYMALGEFEEAQRDFEMMMK 509 (626)
Q Consensus 446 ~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~~~----------------ka~~~~g~a~~~lg~~~eA~~~~~kAl~ 509 (626)
.+..+.++|.++++.++|.+|+..+.+++.+.|.++ .+++++|.++..+|+|++|+.+|++|++
T Consensus 37 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~ 116 (198)
T 2fbn_A 37 SAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLK 116 (198)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 356788999999999999999999999999999887 8999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHH
Q 006908 510 VDKSSEPDATAALSKLKKQRQEVESK 535 (626)
Q Consensus 510 l~P~~~~~~~~~l~~l~~~~~~~~~~ 535 (626)
++|++ ..+...+..+...+.+..+.
T Consensus 117 ~~p~~-~~~~~~lg~~~~~~~~~~~A 141 (198)
T 2fbn_A 117 IDKNN-VKALYKLGVANMYFGFLEEA 141 (198)
T ss_dssp HSTTC-HHHHHHHHHHHHHHTCHHHH
T ss_pred hCccc-HHHHHHHHHHHHHcccHHHH
Confidence 99997 56777777776655554443
No 227
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.56 E-value=1e-06 Score=87.49 Aligned_cols=74 Identities=16% Similarity=0.142 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhcCCCCHHHHH
Q 006908 448 LLHLNVAACLLK----LGECRKSIEACNKVLDANPAHVKGLYRRGMAYMA----LGEFEEAQRDFEMMMKVDKSSEPDAT 519 (626)
Q Consensus 448 ~~~~Nla~~~~k----l~~~~~A~~~~~~aL~~dp~~~ka~~~~g~a~~~----lg~~~eA~~~~~kAl~l~P~~~~~~~ 519 (626)
.+++++|.+|.. .+++.+|+..+.++++. .++.+++++|.+|.. .+++++|+.+|++|+++++ ..+.
T Consensus 75 ~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~~---~~a~ 149 (273)
T 1ouv_A 75 NGCHLLGNLYYSGQGVSQNTNKALQYYSKACDL--KYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLND---GDGC 149 (273)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTTC---HHHH
T ss_pred HHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHc--CCccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcCc---HHHH
Confidence 355556666665 56666666666666555 255566666666665 5666666666666665542 2344
Q ss_pred HHHHHHH
Q 006908 520 AALSKLK 526 (626)
Q Consensus 520 ~~l~~l~ 526 (626)
..+..+.
T Consensus 150 ~~lg~~~ 156 (273)
T 1ouv_A 150 TILGSLY 156 (273)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4444443
No 228
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=98.55 E-value=4e-07 Score=92.72 Aligned_cols=112 Identities=12% Similarity=0.046 Sum_probs=73.2
Q ss_pred HHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 006908 400 KIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANPA 479 (626)
Q Consensus 400 ~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~ 479 (626)
.+...|..+.+.|++++|...|++++. +.|.+.+ .+|+++|.++.++|++++|+..+.+|++++|.
T Consensus 101 ~~~~~~~~~~~~~~~~~A~~~~~~al~----~~p~~~~----------~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~ 166 (308)
T 2ond_A 101 LYFAYADYEESRMKYEKVHSIYNRLLA----IEDIDPT----------LVYIQYMKFARRAEGIKSGRMIFKKAREDART 166 (308)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHT----SSSSCTH----------HHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTC
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHh----ccccCcc----------HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC
Confidence 455667777778888888888888888 5555421 15666777777777777777777777777776
Q ss_pred CHHHHHHHHHHHHH-cCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 006908 480 HVKGLYRRGMAYMA-LGEFEEAQRDFEMMMKVDKSSEPDATAALSKLK 526 (626)
Q Consensus 480 ~~ka~~~~g~a~~~-lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~ 526 (626)
+..+|+..+..... +|++++|+..|++|++++|++ ..+...+..+.
T Consensus 167 ~~~~~~~~a~~~~~~~~~~~~A~~~~~~al~~~p~~-~~~~~~~~~~~ 213 (308)
T 2ond_A 167 RHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDI-PEYVLAYIDYL 213 (308)
T ss_dssp CTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTC-HHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc-HHHHHHHHHHH
Confidence 66666544444332 577777777777777777765 44554444443
No 229
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=98.55 E-value=9.1e-07 Score=76.06 Aligned_cols=88 Identities=17% Similarity=0.195 Sum_probs=77.7
Q ss_pred hhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q 006908 446 RNLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKL 525 (626)
Q Consensus 446 ~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l 525 (626)
...++.++|.+++..++|..|+..+.+++..+|.++.+++.+|.++..+|++++|+..|++++.++|++ ..+...+..+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~-~~~~~~~~~~ 89 (131)
T 2vyi_A 11 EAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAY-SKAYGRMGLA 89 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccC-HHHHHHHHHH
Confidence 356889999999999999999999999999999999999999999999999999999999999999997 5677777766
Q ss_pred HHHHHHHHH
Q 006908 526 KKQRQEVES 534 (626)
Q Consensus 526 ~~~~~~~~~ 534 (626)
........+
T Consensus 90 ~~~~~~~~~ 98 (131)
T 2vyi_A 90 LSSLNKHVE 98 (131)
T ss_dssp HHHTTCHHH
T ss_pred HHHhCCHHH
Confidence 655544433
No 230
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.55 E-value=5.9e-07 Score=79.57 Aligned_cols=88 Identities=13% Similarity=0.122 Sum_probs=77.9
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHH
Q 006908 447 NLLHLNVAACLLKLGECRKSIEACNKVLDANPAH---VKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALS 523 (626)
Q Consensus 447 ~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~~---~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~ 523 (626)
...++++|.+++..++|.+|+..+.+++.++|++ ..+++++|.++..+++|++|+..|+++++++|++ ..+...+.
T Consensus 28 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~-~~~~~~~a 106 (148)
T 2dba_A 28 VEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGD-VKALYRRS 106 (148)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCC-HHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccC-HHHHHHHH
Confidence 5678899999999999999999999999999988 8999999999999999999999999999999997 66777777
Q ss_pred HHHHHHHHHHHH
Q 006908 524 KLKKQRQEVESK 535 (626)
Q Consensus 524 ~l~~~~~~~~~~ 535 (626)
.+.....+..+.
T Consensus 107 ~~~~~~~~~~~A 118 (148)
T 2dba_A 107 QALEKLGRLDQA 118 (148)
T ss_dssp HHHHHHTCHHHH
T ss_pred HHHHHcCCHHHH
Confidence 776655544443
No 231
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.52 E-value=5.1e-07 Score=90.92 Aligned_cols=84 Identities=14% Similarity=0.140 Sum_probs=75.0
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 006908 447 NLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLK 526 (626)
Q Consensus 447 ~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~ 526 (626)
+..+.++|.++++.|+|.+|+..+.+++.++|.++.+|+++|.+|..+|+|++|+.+|++|++++|++ ..+...+..+.
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~-~~~~~~lg~~~ 82 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQS-VKAHFFLGQCQ 82 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHH
Confidence 45788999999999999999999999999999999999999999999999999999999999999998 56666666655
Q ss_pred HHHHH
Q 006908 527 KQRQE 531 (626)
Q Consensus 527 ~~~~~ 531 (626)
....+
T Consensus 83 ~~~g~ 87 (281)
T 2c2l_A 83 LEMES 87 (281)
T ss_dssp HHTTC
T ss_pred HHcCC
Confidence 44433
No 232
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.52 E-value=1.2e-06 Score=74.62 Aligned_cols=85 Identities=21% Similarity=0.378 Sum_probs=75.3
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 006908 447 NLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLK 526 (626)
Q Consensus 447 ~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~ 526 (626)
..+++++|.++...++|.+|+..+.+++..+|.+..+++.+|.++...|++++|+..|++++.++|.+ ..+...+..+.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~-~~~~~~la~~~ 87 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN-AEAWYNLGNAY 87 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCcc-HHHHHHHHHHH
Confidence 45789999999999999999999999999999999999999999999999999999999999999987 56666666665
Q ss_pred HHHHHH
Q 006908 527 KQRQEV 532 (626)
Q Consensus 527 ~~~~~~ 532 (626)
......
T Consensus 88 ~~~~~~ 93 (125)
T 1na0_A 88 YKQGDY 93 (125)
T ss_dssp HHTTCH
T ss_pred HHhcCH
Confidence 544433
No 233
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.52 E-value=4.4e-07 Score=94.79 Aligned_cols=107 Identities=19% Similarity=0.179 Sum_probs=91.8
Q ss_pred HHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 006908 397 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA 476 (626)
Q Consensus 397 ~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~ 476 (626)
.+..+...|..++..|+|++|+..|.+++........ ......++.++|.++..+|++.+|+..+.+++.+
T Consensus 186 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 256 (406)
T 3sf4_A 186 QGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGD---------KAAERRAYSNLGNAYIFLGEFETASEYYKKTLLL 256 (406)
T ss_dssp HHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCC---------cHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Confidence 4556778899999999999999999999986543211 1233568999999999999999999999999998
Q ss_pred CCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCC
Q 006908 477 NPAH------VKGLYRRGMAYMALGEFEEAQRDFEMMMKVDK 512 (626)
Q Consensus 477 dp~~------~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P 512 (626)
.+.. +.+++++|.++..+|++++|+..|++|+++.+
T Consensus 257 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~ 298 (406)
T 3sf4_A 257 ARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQ 298 (406)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHhCcCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 7765 78999999999999999999999999999854
No 234
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.51 E-value=9.2e-07 Score=98.27 Aligned_cols=114 Identities=17% Similarity=0.082 Sum_probs=99.1
Q ss_pred HHHHhhhchhhcccc----------HHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcC--CHHHH
Q 006908 399 EKIRVTGNRLFKEGK----------FELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLG--ECRKS 466 (626)
Q Consensus 399 ~~~k~~Gn~~f~~g~----------~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~--~~~~A 466 (626)
..+..+|..+.+.++ |++|+..|.+++. .+|.+ ..+|++++.++.+++ +|.+|
T Consensus 64 taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~----~~pK~-----------y~aW~hR~w~l~~l~~~~~~~e 128 (567)
T 1dce_A 64 TLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLR----VNPKS-----------YGTWHHRCWLLSRLPEPNWARE 128 (567)
T ss_dssp HHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHTCSSCCHHHH
T ss_pred HHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHH----hCCCC-----------HHHHHHHHHHHHHcccccHHHH
Confidence 345556666666666 9999999999999 67776 569999999999999 77999
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHcC-CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q 006908 467 IEACNKVLDANPAHVKGLYRRGMAYMALG-EFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQ 528 (626)
Q Consensus 467 ~~~~~~aL~~dp~~~ka~~~~g~a~~~lg-~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~~ 528 (626)
+.+|.++|++||.|..||+.|+.++..++ .+++|++++.++++++|.| ..++.....+...
T Consensus 129 l~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n-~saW~~r~~ll~~ 190 (567)
T 1dce_A 129 LELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSN-YSSWHYRSCLLPQ 190 (567)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCC-HHHHHHHHHHHHH
T ss_pred HHHHHHHHhhccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCC-ccHHHHHHHHHHh
Confidence 99999999999999999999999999999 9999999999999999998 4677776666544
No 235
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.50 E-value=9.6e-07 Score=73.17 Aligned_cols=67 Identities=13% Similarity=0.083 Sum_probs=62.7
Q ss_pred hHHHHHHHHHHHHcCC---HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC
Q 006908 447 NLLHLNVAACLLKLGE---CRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKS 513 (626)
Q Consensus 447 ~~~~~Nla~~~~kl~~---~~~A~~~~~~aL~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~ 513 (626)
..++..+|.+++..++ ..+|...+.++|.+||++++|++.+|.+++..|+|++|+..|+++++.+|.
T Consensus 6 ~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~ 75 (93)
T 3bee_A 6 ATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDP 75 (93)
T ss_dssp HHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCT
T ss_pred HHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Confidence 3478889999987766 799999999999999999999999999999999999999999999999998
No 236
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=98.50 E-value=7.1e-07 Score=90.90 Aligned_cols=87 Identities=11% Similarity=0.025 Sum_probs=79.5
Q ss_pred HHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHH
Q 006908 414 FELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVK-GLYRRGMAYM 492 (626)
Q Consensus 414 ~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~~~k-a~~~~g~a~~ 492 (626)
+++|+..|++|+.. +.|.+ ..+|.++|.++.++|++++|+..|.++|+++|.++. +|+++|.++.
T Consensus 80 ~~~A~~~~~rAl~~---~~p~~-----------~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~ 145 (308)
T 2ond_A 80 SDEAANIYERAIST---LLKKN-----------MLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFAR 145 (308)
T ss_dssp HHHHHHHHHHHHTT---TTTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHH---hCccc-----------HHHHHHHHHHHHhcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHH
Confidence 49999999999983 14554 458999999999999999999999999999999987 9999999999
Q ss_pred HcCCHHHHHHHHHHHHhcCCCC
Q 006908 493 ALGEFEEAQRDFEMMMKVDKSS 514 (626)
Q Consensus 493 ~lg~~~eA~~~~~kAl~l~P~~ 514 (626)
.+|++++|+..|++|++++|.+
T Consensus 146 ~~~~~~~A~~~~~~a~~~~p~~ 167 (308)
T 2ond_A 146 RAEGIKSGRMIFKKAREDARTR 167 (308)
T ss_dssp HHHCHHHHHHHHHHHHTSTTCC
T ss_pred HhcCHHHHHHHHHHHHhcCCCC
Confidence 9999999999999999999976
No 237
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.49 E-value=4.9e-07 Score=90.57 Aligned_cols=108 Identities=13% Similarity=0.028 Sum_probs=86.7
Q ss_pred HHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--
Q 006908 400 KIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN-- 477 (626)
Q Consensus 400 ~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~d-- 477 (626)
.....|..+++.++|..|+..|+.++. . + ++ .+...+++++|.++..+|++.+|+..|.+++.-.
T Consensus 137 ~~~~~a~l~~~~~r~~dA~~~l~~a~~----~-~-d~-------~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~ 203 (282)
T 4f3v_A 137 VAWMKAVVYGAAERWTDVIDQVKSAGK----W-P-DK-------FLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAG 203 (282)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHTTGGG----C-S-CH-------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHhhc----c-C-Cc-------ccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCC
Confidence 556778888899999999999986655 1 1 10 0123588999999999999999999999998654
Q ss_pred CC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHH
Q 006908 478 PA-HVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAAL 522 (626)
Q Consensus 478 p~-~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l 522 (626)
|. ...++|++|.|+..+|+.++|+..|++++..+|+ ..+...|
T Consensus 204 P~~~~da~~~~glaL~~lGr~deA~~~l~~a~a~~P~--~~~~~aL 247 (282)
T 4f3v_A 204 EACARAIAWYLAMARRSQGNESAAVALLEWLQTTHPE--PKVAAAL 247 (282)
T ss_dssp TTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCC--HHHHHHH
T ss_pred ccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc--HHHHHHH
Confidence 55 6679999999999999999999999999999998 4455444
No 238
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=98.49 E-value=3.3e-07 Score=85.09 Aligned_cols=108 Identities=15% Similarity=0.074 Sum_probs=87.3
Q ss_pred HHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHH------------------HH------HhhhhhHHHHH
Q 006908 397 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEG------------------KV------FVGKRNLLHLN 452 (626)
Q Consensus 397 ~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~------------------~~------~~~~~~~~~~N 452 (626)
.+..+...|..++..|++++|+..|++++. ..| +..-. .. ..+....++++
T Consensus 39 ~~~a~~~la~~~~~~g~~~~A~~~~~~a~~----~~p-~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~ 113 (176)
T 2r5s_A 39 RGDVKLAKADCLLETKQFELAQELLATIPL----EYQ-DNSYKSLIAKLELHQQAAESPELKRLEQELAANPDNFELACE 113 (176)
T ss_dssp SHHHHHHHHHHHHHTTCHHHHHHHHTTCCG----GGC-CHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTTCHHHHHH
T ss_pred cHHHHHHHHHHHHHCCCHHHHHHHHHHhhh----ccC-ChHHHHHHHHHHHHhhcccchHHHHHHHHHHhCCCCHHHHHH
Confidence 355677888889999999999999988776 333 22100 00 11123568899
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCC--HHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 006908 453 VAACLLKLGECRKSIEACNKVLDANPAH--VKGLYRRGMAYMALGEFEEAQRDFEMMMK 509 (626)
Q Consensus 453 la~~~~kl~~~~~A~~~~~~aL~~dp~~--~ka~~~~g~a~~~lg~~~eA~~~~~kAl~ 509 (626)
+|.++..+|++++|+..+.++++++|.+ ..+++++|.++..+|++++|+..|+++|.
T Consensus 114 la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~~~y~~al~ 172 (176)
T 2r5s_A 114 LAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAIASKYRRQLY 172 (176)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcHHHHHHHHHH
Confidence 9999999999999999999999999976 66999999999999999999999999885
No 239
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.47 E-value=1.5e-06 Score=73.42 Aligned_cols=82 Identities=11% Similarity=0.024 Sum_probs=70.2
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHH
Q 006908 447 NLLHLNVAACLLKLGECRKSIEACNKVLDAN-------PAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDAT 519 (626)
Q Consensus 447 ~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~d-------p~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~ 519 (626)
+.-++.+|..+++.++|..|+..+..|+... +..+..++++|.|+..+|+++.|+..+++|++++|++ ..+.
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~-~~~~ 83 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEH-QRAN 83 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCC-HHHH
Confidence 4457789999999999999999999999863 3457889999999999999999999999999999998 5666
Q ss_pred HHHHHHHHHH
Q 006908 520 AALSKLKKQR 529 (626)
Q Consensus 520 ~~l~~l~~~~ 529 (626)
.++..++..+
T Consensus 84 ~n~~~~~~~~ 93 (104)
T 2v5f_A 84 GNLKYFEYIM 93 (104)
T ss_dssp HHHHHHHHHH
T ss_pred hhHHHHHHHH
Confidence 6766555443
No 240
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.45 E-value=1e-06 Score=82.78 Aligned_cols=109 Identities=15% Similarity=0.102 Sum_probs=90.1
Q ss_pred HHHHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 006908 395 MDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVL 474 (626)
Q Consensus 395 ~~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL 474 (626)
...+..+...|..++..|+|++|+..|.+++..+... +++. .....+++|+|.++..+|+|++|+..+.+++
T Consensus 63 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~-~~~~-------~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 134 (203)
T 3gw4_A 63 TAEHRALHQVGMVERMAGNWDAARRCFLEERELLASL-PEDP-------LAASANAYEVATVALHFGDLAGARQEYEKSL 134 (203)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS-CCCH-------HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc-CccH-------HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 3456778889999999999999999999999975532 2121 1245689999999999999999999999999
Q ss_pred HhCC--CC----HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC
Q 006908 475 DANP--AH----VKGLYRRGMAYMALGEFEEAQRDFEMMMKVD 511 (626)
Q Consensus 475 ~~dp--~~----~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~ 511 (626)
.+.+ .+ +.+++++|.++..+|++++|+..|++|+.+.
T Consensus 135 ~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 177 (203)
T 3gw4_A 135 VYAQQADDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIF 177 (203)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHhccchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHH
Confidence 7642 22 4567999999999999999999999999874
No 241
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.44 E-value=6.4e-07 Score=94.14 Aligned_cols=92 Identities=11% Similarity=0.063 Sum_probs=83.6
Q ss_pred HHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 006908 397 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA 476 (626)
Q Consensus 397 ~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~ 476 (626)
.+..+.+.|..+++.|+|++|+.+|++|+. +.|.+ ..+|+++|.||..+++|++|+.++.+|+++
T Consensus 272 ~~~~~~nla~~~~~~g~~~~A~~~~~~al~----~~p~~-----------~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l 336 (370)
T 1ihg_A 272 ALSCVLNIGACKLKMSDWQGAVDSCLEALE----IDPSN-----------TKALYRRAQGWQGLKEYDQALADLKKAQEI 336 (370)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHT----TCTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCHHHHHHHHHHHHH----hCchh-----------HHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 355677899999999999999999999999 66665 568999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHH
Q 006908 477 NPAHVKGLYRRGMAYMALGEFEEAQRD 503 (626)
Q Consensus 477 dp~~~ka~~~~g~a~~~lg~~~eA~~~ 503 (626)
+|++..++..++.++..++++++|.+.
T Consensus 337 ~P~~~~~~~~l~~~~~~~~~~~~a~k~ 363 (370)
T 1ihg_A 337 APEDKAIQAELLKVKQKIKAQKDKEKA 363 (370)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999887654
No 242
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.44 E-value=1.5e-06 Score=96.58 Aligned_cols=112 Identities=13% Similarity=0.065 Sum_probs=95.3
Q ss_pred hhhchhhccccH-HHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCC----------HHHHHHHHH
Q 006908 403 VTGNRLFKEGKF-ELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGE----------CRKSIEACN 471 (626)
Q Consensus 403 ~~Gn~~f~~g~~-~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~----------~~~A~~~~~ 471 (626)
.....+.+.+.| ++|+..|.+++. .+|.+ .++|++++.++.++++ +.+|+..+.
T Consensus 33 ~~~~~~~~~~~~~eeal~~~~~~l~----~nP~~-----------~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~ 97 (567)
T 1dce_A 33 QAVFQKRQAGELDESVLELTSQILG----ANPDF-----------ATLWNCRREVLQHLETEKSPEESAALVKAELGFLE 97 (567)
T ss_dssp HHHHHHHHTTCCSHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCHHHHHHHHHHHH----HCchh-----------HHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHH
Confidence 333344445554 578999999999 67776 6799999999999998 999999999
Q ss_pred HHHHhCCCCHHHHHHHHHHHHHcC--CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 006908 472 KVLDANPAHVKGLYRRGMAYMALG--EFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQ 530 (626)
Q Consensus 472 ~aL~~dp~~~ka~~~~g~a~~~lg--~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~~~~ 530 (626)
++|+.+|.+..||+.|+.++..++ +|++|++.+.++++++|.| -.++.....+.....
T Consensus 98 ~~l~~~pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~N-~~aW~~R~~~l~~l~ 157 (567)
T 1dce_A 98 SCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERN-FHCWDYRRFVAAQAA 157 (567)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHTC
T ss_pred HHHHhCCCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhcccc-ccHHHHHHHHHHHcC
Confidence 999999999999999999999999 7799999999999999998 567777766655543
No 243
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.42 E-value=1.5e-06 Score=83.43 Aligned_cols=78 Identities=13% Similarity=0.062 Sum_probs=55.5
Q ss_pred hHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCC--CCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhcCCCCHH
Q 006908 447 NLLHLNVAACLLK----LGECRKSIEACNKVLDANP--AHVKGLYRRGMAYMA----LGEFEEAQRDFEMMMKVDKSSEP 516 (626)
Q Consensus 447 ~~~~~Nla~~~~k----l~~~~~A~~~~~~aL~~dp--~~~ka~~~~g~a~~~----lg~~~eA~~~~~kAl~l~P~~~~ 516 (626)
..+++|+|.+|.. .+++.+|+..+.++++..+ .++.|++++|.+|.. .+++++|+.+|++|+++ |.+ .
T Consensus 85 ~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~-~ 162 (212)
T 3rjv_A 85 KSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRT-G 162 (212)
T ss_dssp HHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCT-T
T ss_pred HHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCC-H
Confidence 3467778887777 7778888888888877766 347788888888877 77788888888888777 333 3
Q ss_pred HHHHHHHHHH
Q 006908 517 DATAALSKLK 526 (626)
Q Consensus 517 ~~~~~l~~l~ 526 (626)
.+...|..+.
T Consensus 163 ~a~~~Lg~~y 172 (212)
T 3rjv_A 163 YAEYWAGMMF 172 (212)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 4555555554
No 244
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.42 E-value=8.1e-07 Score=89.58 Aligned_cols=107 Identities=20% Similarity=0.196 Sum_probs=91.4
Q ss_pred HHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 006908 397 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA 476 (626)
Q Consensus 397 ~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~ 476 (626)
.+..+...|..++..|+|++|+..|++++....... + ......++.++|.++..+|++.+|+..+.+++.+
T Consensus 182 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~--~-------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 252 (338)
T 3ro2_A 182 QGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFG--D-------KAAERRAYSNLGNAYIFLGEFETASEYYKKTLLL 252 (338)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHT--C-------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcC--C-------hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 455677889999999999999999999998544321 1 1233568999999999999999999999999998
Q ss_pred CCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCC
Q 006908 477 NPAH------VKGLYRRGMAYMALGEFEEAQRDFEMMMKVDK 512 (626)
Q Consensus 477 dp~~------~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P 512 (626)
.+.. ..+++.+|.++..+|++++|+..|++|+.+.+
T Consensus 253 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~ 294 (338)
T 3ro2_A 253 ARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQ 294 (338)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHhhcchhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 7655 78999999999999999999999999999854
No 245
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.41 E-value=1.3e-06 Score=75.11 Aligned_cols=86 Identities=12% Similarity=0.228 Sum_probs=72.6
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCH------HHHHH
Q 006908 447 NLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSE------PDATA 520 (626)
Q Consensus 447 ~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~------~~~~~ 520 (626)
+..++++|.+++..++|.+|+..+.+++.++|.++.+++++|.++..+|++++|+..|++++.++|.+. ..+..
T Consensus 4 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (131)
T 1elr_A 4 ALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYA 83 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHHH
Confidence 457889999999999999999999999999999999999999999999999999999999999987541 34555
Q ss_pred HHHHHHHHHHHH
Q 006908 521 ALSKLKKQRQEV 532 (626)
Q Consensus 521 ~l~~l~~~~~~~ 532 (626)
.+..+.......
T Consensus 84 ~la~~~~~~~~~ 95 (131)
T 1elr_A 84 RIGNSYFKEEKY 95 (131)
T ss_dssp HHHHHHHHTTCH
T ss_pred HHHHHHHHhccH
Confidence 555554444433
No 246
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.40 E-value=8.3e-07 Score=76.33 Aligned_cols=75 Identities=20% Similarity=0.200 Sum_probs=67.3
Q ss_pred HHHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 006908 396 DEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLD 475 (626)
Q Consensus 396 ~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~ 475 (626)
..+..+...|..++..|+|++|+..|++++. +.|.+ ..+++++|.|+.++|++.+|+..+.+++.
T Consensus 25 ~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~----~~p~~-----------~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 89 (117)
T 3k9i_A 25 DLAECYLGLGSTFRTLGEYRKAEAVLANGVK----QFPNH-----------QALRVFYAMVLYNLGRYEQGVELLLKIIA 89 (117)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCCc-----------hHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4567788999999999999999999999999 56766 45899999999999999999999999999
Q ss_pred hCCCCHHHHH
Q 006908 476 ANPAHVKGLY 485 (626)
Q Consensus 476 ~dp~~~ka~~ 485 (626)
.+|++.....
T Consensus 90 ~~p~~~~~~~ 99 (117)
T 3k9i_A 90 ETSDDETIQS 99 (117)
T ss_dssp HHCCCHHHHH
T ss_pred hCCCcHHHHH
Confidence 9999987654
No 247
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.39 E-value=1.3e-06 Score=91.95 Aligned_cols=106 Identities=19% Similarity=0.242 Sum_probs=90.0
Q ss_pred HHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 006908 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 477 (626)
Q Consensus 398 a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~d 477 (626)
+..+...|..++..|+|++|+.+|++++....... + ......++.++|.+|..+|+|.+|+..+.+++.+.
T Consensus 223 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~--~-------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 293 (411)
T 4a1s_A 223 GRACGNLGNTYYLLGDFQAAIEHHQERLRIAREFG--D-------RAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALA 293 (411)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT--C-------HHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcC--C-------cHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHH
Confidence 34667789999999999999999999998544311 1 12235689999999999999999999999999988
Q ss_pred CCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCC
Q 006908 478 PAH------VKGLYRRGMAYMALGEFEEAQRDFEMMMKVDK 512 (626)
Q Consensus 478 p~~------~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P 512 (626)
+.. +.+++.+|.++..+|++++|+..|++++.+.+
T Consensus 294 ~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 334 (411)
T 4a1s_A 294 VELGEREVEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQ 334 (411)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 754 78999999999999999999999999999854
No 248
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.38 E-value=3.1e-06 Score=84.00 Aligned_cols=94 Identities=16% Similarity=0.152 Sum_probs=53.8
Q ss_pred HHHHHhhhchhhc----cccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHH----cCCHHHHHHH
Q 006908 398 AEKIRVTGNRLFK----EGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLK----LGECRKSIEA 469 (626)
Q Consensus 398 a~~~k~~Gn~~f~----~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~k----l~~~~~A~~~ 469 (626)
+..+...|..++. .+++++|+..|++|+.. . + ..+++++|.+|.. .+++++|+..
T Consensus 74 ~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~----~--~-----------~~a~~~lg~~~~~~~~~~~~~~~A~~~ 136 (273)
T 1ouv_A 74 SNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDL----K--Y-----------AEGCASLGGIYHDGKVVTRDFKKAVEY 136 (273)
T ss_dssp HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT----T--C-----------HHHHHHHHHHHHHCSSSCCCHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHc----C--C-----------ccHHHHHHHHHHcCCCcccCHHHHHHH
Confidence 4455556666666 66666666666666652 1 1 2345555555555 5555555555
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhc
Q 006908 470 CNKVLDANPAHVKGLYRRGMAYMA----LGEFEEAQRDFEMMMKV 510 (626)
Q Consensus 470 ~~~aL~~dp~~~ka~~~~g~a~~~----lg~~~eA~~~~~kAl~l 510 (626)
+.++++++ +..+++++|.++.. .+++++|+.+|++|+++
T Consensus 137 ~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~ 179 (273)
T 1ouv_A 137 FTKACDLN--DGDGCTILGSLYDAGRGTPKDLKKALASYDKACDL 179 (273)
T ss_dssp HHHHHHTT--CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHhcC--cHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC
Confidence 55555543 45555555555555 55555555555555555
No 249
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.38 E-value=1.7e-06 Score=73.16 Aligned_cols=82 Identities=15% Similarity=0.178 Sum_probs=68.2
Q ss_pred HHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 006908 399 EKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANP 478 (626)
Q Consensus 399 ~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp 478 (626)
......|..+|+.++|..|+..|++|+..+..-... ......++.++|.|++++|++..|+..+.+++.++|
T Consensus 6 ~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~--------~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P 77 (104)
T 2v5f_A 6 EDCFELGKVAYTEADYYHTELWMEQALRQLDEGEIS--------TIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDP 77 (104)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCC--------SSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCC--------cccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCC
Confidence 345688999999999999999999999865322110 112356899999999999999999999999999999
Q ss_pred CCHHHHHHHH
Q 006908 479 AHVKGLYRRG 488 (626)
Q Consensus 479 ~~~ka~~~~g 488 (626)
++..++.+++
T Consensus 78 ~~~~~~~n~~ 87 (104)
T 2v5f_A 78 EHQRANGNLK 87 (104)
T ss_dssp TCHHHHHHHH
T ss_pred CCHHHHhhHH
Confidence 9999988886
No 250
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.36 E-value=1.3e-06 Score=83.84 Aligned_cols=111 Identities=11% Similarity=0.064 Sum_probs=94.3
Q ss_pred HHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcC----CHHHHHHHHHHH
Q 006908 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLG----ECRKSIEACNKV 473 (626)
Q Consensus 398 a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~----~~~~A~~~~~~a 473 (626)
+..+...|..++..+++++|+.+|++|+. . .+ ..+++|+|.+|.. + ++.+|+..+.++
T Consensus 18 ~~a~~~lg~~~~~~~~~~~A~~~~~~a~~----~--g~-----------~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A 79 (212)
T 3rjv_A 18 RRAQYYLADTWVSSGDYQKAEYWAQKAAA----Q--GD-----------GDALALLAQLKIR-NPQQADYPQARQLAEKA 79 (212)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHH----T--TC-----------HHHHHHHHHHTTS-STTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHH----c--CC-----------HHHHHHHHHHHHc-CCCCCCHHHHHHHHHHH
Confidence 56777899999999999999999999998 2 12 4588999999998 7 999999999999
Q ss_pred HHhCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHH
Q 006908 474 LDANPAHVKGLYRRGMAYMA----LGEFEEAQRDFEMMMKVDKS-SEPDATAALSKLKKQ 528 (626)
Q Consensus 474 L~~dp~~~ka~~~~g~a~~~----lg~~~eA~~~~~kAl~l~P~-~~~~~~~~l~~l~~~ 528 (626)
++ +.++.|++++|.+|.. .+++++|+.+|++|++..|. +...+...|..+...
T Consensus 80 ~~--~g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~ 137 (212)
T 3rjv_A 80 VE--AGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYAS 137 (212)
T ss_dssp HH--TTCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHH
T ss_pred HH--CCCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHc
Confidence 65 5799999999999998 89999999999999999883 124677777766544
No 251
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.35 E-value=3.9e-06 Score=85.49 Aligned_cols=113 Identities=9% Similarity=-0.087 Sum_probs=96.7
Q ss_pred HHHHHhhhchhhccc--cHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHH----HHc---CCHHHHHH
Q 006908 398 AEKIRVTGNRLFKEG--KFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACL----LKL---GECRKSIE 468 (626)
Q Consensus 398 a~~~k~~Gn~~f~~g--~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~----~kl---~~~~~A~~ 468 (626)
...+..+|..+...+ ++++|+..+.++|. .+|.+ ..+|++++.++ .++ +++.+++.
T Consensus 67 ~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~----~nPk~-----------y~aW~~R~~iL~~~~~~l~~~~~~~~EL~ 131 (306)
T 3dra_A 67 YTIWIYRFNILKNLPNRNLYDELDWCEEIAL----DNEKN-----------YQIWNYRQLIIGQIMELNNNDFDPYREFD 131 (306)
T ss_dssp HHHHHHHHHHHHTCTTSCHHHHHHHHHHHHH----HCTTC-----------CHHHHHHHHHHHHHHHHTTTCCCTHHHHH
T ss_pred HHHHHHHHHHHHHcccccHHHHHHHHHHHHH----HCccc-----------HHHHHHHHHHHHHHHHhccccCCHHHHHH
Confidence 334556777777777 89999999999998 67766 56899999998 777 79999999
Q ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHcCCHH--HHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 006908 469 ACNKVLDANPAHVKGLYRRGMAYMALGEFE--EAQRDFEMMMKVDKSSEPDATAALSKLK 526 (626)
Q Consensus 469 ~~~~aL~~dp~~~ka~~~~g~a~~~lg~~~--eA~~~~~kAl~l~P~~~~~~~~~l~~l~ 526 (626)
.|.++|+.+|.|..||+.|+.++..++.++ ++++.+.++++++|.|. .++.....+-
T Consensus 132 ~~~~~l~~~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~-sAW~~R~~ll 190 (306)
T 3dra_A 132 ILEAMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNN-SAWSHRFFLL 190 (306)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCH-HHHHHHHHHH
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCH-HHHHHHHHHH
Confidence 999999999999999999999999999999 99999999999999984 5665555443
No 252
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.34 E-value=1.1e-06 Score=79.92 Aligned_cols=72 Identities=18% Similarity=0.249 Sum_probs=64.4
Q ss_pred HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Q 006908 458 LKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEF----------EEAQRDFEMMMKVDKSSEPDATAALSKLKK 527 (626)
Q Consensus 458 ~kl~~~~~A~~~~~~aL~~dp~~~ka~~~~g~a~~~lg~~----------~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~ 527 (626)
-+++.|++|+..+.++++++|+++.+|+++|.++..++++ ++|+..|++||+++|++ .++...|..+..
T Consensus 13 ~r~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~-~~A~~~LG~ay~ 91 (158)
T 1zu2_A 13 DRILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKK-DEAVWCIGNAYT 91 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCc-HHHHHHHHHHHH
Confidence 3567799999999999999999999999999999999876 59999999999999998 678888888876
Q ss_pred HHH
Q 006908 528 QRQ 530 (626)
Q Consensus 528 ~~~ 530 (626)
.+.
T Consensus 92 ~lg 94 (158)
T 1zu2_A 92 SFA 94 (158)
T ss_dssp HHH
T ss_pred Hhc
Confidence 553
No 253
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.33 E-value=4.5e-06 Score=85.05 Aligned_cols=103 Identities=11% Similarity=0.032 Sum_probs=93.2
Q ss_pred ccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHH--HHHHHHHHHHHhCCCCHHHHHHHHH
Q 006908 412 GKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECR--KSIEACNKVLDANPAHVKGLYRRGM 489 (626)
Q Consensus 412 g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~--~A~~~~~~aL~~dp~~~ka~~~~g~ 489 (626)
+++.+++..+.+++. .+|.+ ..+|++++.+..+++.|. +++..|.++|+.+|.|..||..|+.
T Consensus 124 ~~~~~EL~~~~~~l~----~~pkn-----------y~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~~R~~ 188 (306)
T 3dra_A 124 FDPYREFDILEAMLS----SDPKN-----------HHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWSHRFF 188 (306)
T ss_dssp CCTHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH----hCCCC-----------HHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 789999999999999 67776 569999999999999999 9999999999999999999999999
Q ss_pred HHHHcCC------HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 006908 490 AYMALGE------FEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQ 530 (626)
Q Consensus 490 a~~~lg~------~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~~~~ 530 (626)
++..++. ++++++++.+++.++|+| ..++..+..+-....
T Consensus 189 ll~~l~~~~~~~~~~eEl~~~~~aI~~~p~n-~SaW~y~~~ll~~~~ 234 (306)
T 3dra_A 189 LLFSKKHLATDNTIDEELNYVKDKIVKCPQN-PSTWNYLLGIHERFD 234 (306)
T ss_dssp HHHSSGGGCCHHHHHHHHHHHHHHHHHCSSC-HHHHHHHHHHHHHTT
T ss_pred HHHhccccchhhhHHHHHHHHHHHHHhCCCC-ccHHHHHHHHHHhcC
Confidence 9999998 999999999999999998 567777777654444
No 254
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.32 E-value=1.3e-06 Score=88.19 Aligned_cols=108 Identities=14% Similarity=0.032 Sum_probs=81.4
Q ss_pred HHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChh-----------------HHH------HHhhhhhHHHHHHH
Q 006908 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDE-----------------EGK------VFVGKRNLLHLNVA 454 (626)
Q Consensus 398 a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~e-----------------e~~------~~~~~~~~~~~Nla 454 (626)
+..+...|..+...|++++|+..|++++. ..|.... ... ...+-...+++|+|
T Consensus 151 ~~a~~~la~~~~~~g~~~~A~~~l~~~~~----~~p~~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la 226 (287)
T 3qou_A 151 GEIGLLLAETLIALNRSEDAEAVLXTIPL----QDQDTRYQGLVAQIELLXQAADTPEIQQLQQQVAENPEDAALATQLA 226 (287)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHTTSCG----GGCSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hhHHHHHHHHHHHCCCHHHHHHHHHhCch----hhcchHHHHHHHHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHH
Confidence 44555666666677777777766666554 2221100 000 01112246899999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCC--HHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 006908 455 ACLLKLGECRKSIEACNKVLDANPAH--VKGLYRRGMAYMALGEFEEAQRDFEMMMK 509 (626)
Q Consensus 455 ~~~~kl~~~~~A~~~~~~aL~~dp~~--~ka~~~~g~a~~~lg~~~eA~~~~~kAl~ 509 (626)
.++..+|++++|+..+.++++.+|++ ..++.+++.++..+|+.++|+..|++++.
T Consensus 227 ~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~a~~~~r~al~ 283 (287)
T 3qou_A 227 LQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGTGDALASXYRRQLY 283 (287)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCCCCcHHHHHHHHHH
Confidence 99999999999999999999999998 99999999999999999999999999885
No 255
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.30 E-value=8.1e-06 Score=84.31 Aligned_cols=103 Identities=16% Similarity=0.018 Sum_probs=90.1
Q ss_pred ccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 006908 412 GKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLG-ECRKSIEACNKVLDANPAHVKGLYRRGMA 490 (626)
Q Consensus 412 g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~-~~~~A~~~~~~aL~~dp~~~ka~~~~g~a 490 (626)
+..++|+.++.++|. ++|.+ .+++++++.+...++ .+.+++..+..+|..+|.+..+|+.|+.+
T Consensus 68 e~se~AL~lt~~~L~----~nP~~-----------ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wl 132 (349)
T 3q7a_A 68 EKSERALELTEIIVR----MNPAH-----------YTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLL 132 (349)
T ss_dssp CCSHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH----hCchh-----------HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 455789999999999 77776 679999999999999 59999999999999999999999999999
Q ss_pred HHHc-C-CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 006908 491 YMAL-G-EFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQ 530 (626)
Q Consensus 491 ~~~l-g-~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~~~~ 530 (626)
+..+ + +++++++.+.++++++|.| -.++.....+-..+.
T Consensus 133 L~~l~~~~~~~EL~~~~k~L~~dpkN-y~AW~~R~wvl~~l~ 173 (349)
T 3q7a_A 133 LDRISPQDPVSEIEYIHGSLLPDPKN-YHTWAYLHWLYSHFS 173 (349)
T ss_dssp HHHHCCSCCHHHHHHHHHHTSSCTTC-HHHHHHHHHHHHHHH
T ss_pred HHHhcCCChHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHHhc
Confidence 9998 8 9999999999999999998 466666555544443
No 256
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.30 E-value=1.3e-05 Score=82.34 Aligned_cols=100 Identities=18% Similarity=0.105 Sum_probs=88.3
Q ss_pred HHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcC--CHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 006908 414 FELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLG--ECRKSIEACNKVLDANPAHVKGLYRRGMAY 491 (626)
Q Consensus 414 ~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~--~~~~A~~~~~~aL~~dp~~~ka~~~~g~a~ 491 (626)
+.+++..+..++. .+|.+ ..+|++++.+..+++ .|.+++..|.++|+++|.|..||+.|+.++
T Consensus 90 l~~EL~~~~~~L~----~~PKn-----------y~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl 154 (331)
T 3dss_A 90 VKAELGFLESCLR----VNPKS-----------YGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVA 154 (331)
T ss_dssp HHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH----hCCCC-----------HHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 7889999999998 67776 569999999999999 499999999999999999999999999999
Q ss_pred HHcCC-HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q 006908 492 MALGE-FEEAQRDFEMMMKVDKSSEPDATAALSKLKKQR 529 (626)
Q Consensus 492 ~~lg~-~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~~~ 529 (626)
..++. ++++++++.++++++|.| ..++..+..+-..+
T Consensus 155 ~~l~~~~~eel~~~~~~I~~~p~N-~SAW~~R~~ll~~l 192 (331)
T 3dss_A 155 AQAAVAPAEELAFTDSLITRNFSN-YSSWHYRSCLLPQL 192 (331)
T ss_dssp HHTTCCHHHHHHHHHHHHHHCSCC-HHHHHHHHHHHHHH
T ss_pred HHhCcCHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHh
Confidence 99999 699999999999999998 45666666554444
No 257
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.29 E-value=1.8e-06 Score=72.11 Aligned_cols=80 Identities=13% Similarity=0.094 Sum_probs=65.1
Q ss_pred HHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 006908 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 477 (626)
Q Consensus 398 a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~d 477 (626)
+..+...|..++..|+|++|+..|++++. +.|.+ ..+|+++|.||.++|++++|+..+.+++++.
T Consensus 7 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~----~~p~~-----------~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~ 71 (100)
T 3ma5_A 7 PFTRYALAQEHLKHDNASRALALFEELVE----TDPDY-----------VGTYYHLGKLYERLDRTDDAIDTYAQGIEVA 71 (100)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HSTTC-----------THHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCCc-----------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhh
Confidence 45677899999999999999999999999 56665 4589999999999999999999999999987
Q ss_pred CC--CHHHHHHHHHHHH
Q 006908 478 PA--HVKGLYRRGMAYM 492 (626)
Q Consensus 478 p~--~~ka~~~~g~a~~ 492 (626)
|. +..+...+..++.
T Consensus 72 ~~~~~~~~~~~l~~~l~ 88 (100)
T 3ma5_A 72 REEGTQKDLSELQDAKL 88 (100)
T ss_dssp HHHSCHHHHHHHHHHHH
T ss_pred hcCCchhHHHHHHHHHH
Confidence 63 3444444444443
No 258
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.27 E-value=5.5e-06 Score=85.08 Aligned_cols=104 Identities=14% Similarity=0.104 Sum_probs=89.6
Q ss_pred hccccHH-HHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHhC
Q 006908 409 FKEGKFE-LAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGE----------CRKSIEACNKVLDAN 477 (626)
Q Consensus 409 f~~g~~~-~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~----------~~~A~~~~~~aL~~d 477 (626)
.+.|.|. +|+.++.++|. ++|.+ .++|+.++.+...++. +.+++..+..+|..+
T Consensus 40 ~~~~e~s~eaL~~t~~~L~----~nP~~-----------ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~ 104 (331)
T 3dss_A 40 RQAGELDESVLELTSQILG----ANPDF-----------ATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVN 104 (331)
T ss_dssp HHTTCCSHHHHHHHHHHHT----TCTTC-----------HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHcCCCCHHHHHHHHHHHH----HCchh-----------HHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhC
Confidence 3566665 79999999999 78877 6789999999988876 789999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCC--HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q 006908 478 PAHVKGLYRRGMAYMALGE--FEEAQRDFEMMMKVDKSSEPDATAALSKLKKQ 528 (626)
Q Consensus 478 p~~~ka~~~~g~a~~~lg~--~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~~ 528 (626)
|.|..+|+.|+.++..++. ++++++.+.++++++|.| -.++.....+-..
T Consensus 105 PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprN-y~AW~~R~~vl~~ 156 (331)
T 3dss_A 105 PKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERN-FHCWDYRRFVAAQ 156 (331)
T ss_dssp TTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHH
Confidence 9999999999999999994 999999999999999998 4666666555443
No 259
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.25 E-value=1.5e-06 Score=94.45 Aligned_cols=109 Identities=11% Similarity=0.071 Sum_probs=93.2
Q ss_pred HHHHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 006908 395 MDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVL 474 (626)
Q Consensus 395 ~~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL 474 (626)
...+..+.+.|..+..+|+|++|+.+|+++|.......+.+ +...+..++|||.+|..+|+|++|+..+.+||
T Consensus 348 p~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~-------Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al 420 (490)
T 3n71_A 348 LYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHN-------NAQLGMAVMRAGLTNWHAGHIEVGHGMICKAY 420 (490)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTT-------CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCC-------CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 45688888999999999999999999999999776554444 34567899999999999999999999999999
Q ss_pred HhC-----CCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Q 006908 475 DAN-----PAH---VKGLYRRGMAYMALGEFEEAQRDFEMMMKV 510 (626)
Q Consensus 475 ~~d-----p~~---~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l 510 (626)
++- |++ ++.+-.+++++..++.|.+|...|++|.+-
T Consensus 421 ~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~ 464 (490)
T 3n71_A 421 AILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMREA 464 (490)
T ss_dssp HHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 763 554 567788999999999999999999988653
No 260
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.20 E-value=1e-05 Score=72.11 Aligned_cols=89 Identities=11% Similarity=-0.031 Sum_probs=79.0
Q ss_pred hhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCC
Q 006908 404 TGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLK----LGECRKSIEACNKVLDANPA 479 (626)
Q Consensus 404 ~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~k----l~~~~~A~~~~~~aL~~dp~ 479 (626)
.|..++..+.+++|+.+|++|... .+ ..+++|+|.+|.. .+++.+|+..+.+|.+. .
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~------g~-----------~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g 91 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACEL------NS-----------GNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--N 91 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHT------TC-----------HHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--T
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcC------CC-----------HHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC--C
Confidence 667777778888999999999982 12 4588999999999 89999999999999887 7
Q ss_pred CHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhcC
Q 006908 480 HVKGLYRRGMAYMA----LGEFEEAQRDFEMMMKVD 511 (626)
Q Consensus 480 ~~ka~~~~g~a~~~----lg~~~eA~~~~~kAl~l~ 511 (626)
++.|++++|.+|.. .+++++|+.+|++|.++.
T Consensus 92 ~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g 127 (138)
T 1klx_A 92 DQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRLG 127 (138)
T ss_dssp CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHCC
Confidence 89999999999999 999999999999999985
No 261
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.18 E-value=1.4e-05 Score=82.95 Aligned_cols=108 Identities=16% Similarity=0.075 Sum_probs=86.6
Q ss_pred HHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 006908 397 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA 476 (626)
Q Consensus 397 ~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~ 476 (626)
.+..+...|..++..|+|+.|...|.+++....... + ......+++++|.++..+|+|.+|+..+.+++.+
T Consensus 52 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~--~-------~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~ 122 (373)
T 1hz4_A 52 RIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHD--V-------WHYALWSLIQQSEILFAQGFLQTAWETQEKAFQL 122 (373)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTT--C-------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcC--c-------HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 455677888899999999999999999998543321 1 1123456889999999999999999999999887
Q ss_pred C--------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC
Q 006908 477 N--------PAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKS 513 (626)
Q Consensus 477 d--------p~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~ 513 (626)
. |....+++++|.++..+|++++|...|++++.+.+.
T Consensus 123 ~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 167 (373)
T 1hz4_A 123 INEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSS 167 (373)
T ss_dssp HHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTT
T ss_pred HHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhc
Confidence 5 334667888999999999999999999999998765
No 262
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=98.17 E-value=1.5e-05 Score=69.14 Aligned_cols=102 Identities=12% Similarity=0.153 Sum_probs=80.2
Q ss_pred cHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHH---HHHHHHHHHHhC-C-CCHHHHHHH
Q 006908 413 KFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRK---SIEACNKVLDAN-P-AHVKGLYRR 487 (626)
Q Consensus 413 ~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~---A~~~~~~aL~~d-p-~~~ka~~~~ 487 (626)
....+...|.+++. ..+.. ..+.+|+|.|+.+..+... ++..+..++.-+ | ..-.++|.+
T Consensus 16 ~l~~~~~~y~~e~~----~~~~s-----------~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~L 80 (126)
T 1nzn_A 16 DLLKFEKKFQSEKA----AGSVS-----------KSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYL 80 (126)
T ss_dssp HHHHHHHHHHHHHH----HSCCC-----------HHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc----cCCCc-----------HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHH
Confidence 34566667777765 22222 4578899999999887666 999999988877 5 567899999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 006908 488 GMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQ 530 (626)
Q Consensus 488 g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~~~~ 530 (626)
|.+++++|+|+.|+.+++.+|+++|+| ..+......++.++.
T Consensus 81 Avg~yklg~Y~~A~~~~~~lL~~eP~n-~QA~~Lk~~i~~~i~ 122 (126)
T 1nzn_A 81 AVGNYRLKEYEKALKYVRGLLQTEPQN-NQAKELERLIDKAMK 122 (126)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHHHH
Confidence 999999999999999999999999998 567766666655443
No 263
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.13 E-value=1.1e-05 Score=83.18 Aligned_cols=110 Identities=13% Similarity=-0.015 Sum_probs=96.1
Q ss_pred HHHhhhchhhccc-cHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHc-C-CHHHHHHHHHHHHHh
Q 006908 400 KIRVTGNRLFKEG-KFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKL-G-ECRKSIEACNKVLDA 476 (626)
Q Consensus 400 ~~k~~Gn~~f~~g-~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl-~-~~~~A~~~~~~aL~~ 476 (626)
.+..++..+...+ .+++|+..+.++|. .+|.+ ..+|++++.|+.++ + ++.+++..|.++|++
T Consensus 90 aWn~R~~iL~~l~~~l~eEL~~~~~~L~----~nPKn-----------y~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~ 154 (349)
T 3q7a_A 90 VWQYRFSLLTSLNKSLEDELRLMNEFAV----QNLKS-----------YQVWHHRLLLLDRISPQDPVSEIEYIHGSLLP 154 (349)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHH----TTCCC-----------HHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHH----hCCCc-----------HHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Confidence 4455666676677 59999999999998 78877 56999999999998 8 999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCHH--------HHHHHHHHHHhcCCCCHHHHHHHHHHH
Q 006908 477 NPAHVKGLYRRGMAYMALGEFE--------EAQRDFEMMMKVDKSSEPDATAALSKL 525 (626)
Q Consensus 477 dp~~~ka~~~~g~a~~~lg~~~--------eA~~~~~kAl~l~P~~~~~~~~~l~~l 525 (626)
+|.|..||+.|+.++..++.++ ++++.+.++++++|.|. .++.....+
T Consensus 155 dpkNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~-SAW~~R~~l 210 (349)
T 3q7a_A 155 DPKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRNN-SAWGWRWYL 210 (349)
T ss_dssp CTTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTCH-HHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCCH-HHHHHHHHH
Confidence 9999999999999999999988 99999999999999984 565555544
No 264
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.12 E-value=6.8e-06 Score=70.03 Aligned_cols=81 Identities=12% Similarity=0.060 Sum_probs=65.6
Q ss_pred HHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 006908 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 477 (626)
Q Consensus 398 a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~d 477 (626)
+..+...|..++..|+|++|+..|++++. +.|.+ ..+++++|.|+.++|++.+|+..+.+++.++
T Consensus 19 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~----~~p~~-----------~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 83 (115)
T 2kat_A 19 MLLRFTLGKTYAEHEQFDAALPHLRAALD----FDPTY-----------SVAWKWLGKTLQGQGDRAGARQAWESGLAAA 83 (115)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHH----HCCCc-----------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhc
Confidence 34677899999999999999999999999 56655 4588999999999999999999999999998
Q ss_pred CC--CHHHHHHHHHHHHH
Q 006908 478 PA--HVKGLYRRGMAYMA 493 (626)
Q Consensus 478 p~--~~ka~~~~g~a~~~ 493 (626)
|. +..++..+..++..
T Consensus 84 ~~~~~~~~~~~l~~~l~~ 101 (115)
T 2kat_A 84 QSRGDQQVVKELQVFLRR 101 (115)
T ss_dssp HHHTCHHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHHHH
Confidence 74 34444444444433
No 265
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.10 E-value=1.7e-05 Score=82.40 Aligned_cols=107 Identities=13% Similarity=0.119 Sum_probs=88.9
Q ss_pred HHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 006908 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 477 (626)
Q Consensus 398 a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~d 477 (626)
+..+...|..++..|+|.+|+..|++++.......... ......++.|+|.++..+|++++|+..+.+++.+.
T Consensus 93 ~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~-------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 165 (373)
T 1hz4_A 93 LWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQ-------LPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVL 165 (373)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTT-------STHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhcccc-------CcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Confidence 34466789999999999999999999998654332110 01235678999999999999999999999999987
Q ss_pred CC-----CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC
Q 006908 478 PA-----HVKGLYRRGMAYMALGEFEEAQRDFEMMMKVD 511 (626)
Q Consensus 478 p~-----~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~ 511 (626)
+. ...+++.+|.++...|++++|+..|++++.+.
T Consensus 166 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~ 204 (373)
T 1hz4_A 166 SSYQPQQQLQCLAMLIQCSLARGDLDNARSQLNRLENLL 204 (373)
T ss_dssp TTSCGGGGHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred hccCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 75 35789999999999999999999999999874
No 266
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.09 E-value=6.5e-06 Score=82.37 Aligned_cols=130 Identities=12% Similarity=0.029 Sum_probs=95.3
Q ss_pred HhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-
Q 006908 402 RVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANPAH- 480 (626)
Q Consensus 402 k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~~- 480 (626)
...+..+...|+|++|...|..++. ..|.+ . .++++|.+++++++|.+|+..+..++...+..
T Consensus 106 LayA~~L~~~g~y~eA~~~l~~~~~----~~p~~-----------~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~ 169 (282)
T 4f3v_A 106 MGFAACEAAQGNYADAMEALEAAPV----AGSEH-----------L-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFL 169 (282)
T ss_dssp HHHHHHHHHHTCHHHHHHHHTSSCC----TTCHH-----------H-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHh----cCCch-----------H-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCccc
Confidence 3456777788899999999987665 33322 3 77899999999999999999999887753221
Q ss_pred -HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCC
Q 006908 481 -VKGLYRRGMAYMALGEFEEAQRDFEMMMKVD--KSSEPDATAALSKLKKQRQEVESKARKQFKGLFDKKP 548 (626)
Q Consensus 481 -~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~--P~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 548 (626)
..++|++|.++..+|++++|+.+|++++... |....++...+..+...+.+..+ -+..++++....+
T Consensus 170 ~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~de-A~~~l~~a~a~~P 239 (282)
T 4f3v_A 170 AGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNESA-AVALLEWLQTTHP 239 (282)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHHH-HHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCHHH-HHHHHHHHHhcCC
Confidence 4589999999999999999999999999654 55335566666666555554333 2345555555443
No 267
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.00 E-value=2.5e-05 Score=85.67 Aligned_cols=112 Identities=13% Similarity=0.087 Sum_probs=81.2
Q ss_pred HHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 006908 400 KIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANPA 479 (626)
Q Consensus 400 ~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~ 479 (626)
.+...|..+.+.|++++|...|++++. +.|.+. ..+|++++.++.++|++++|+..+.+|++..|.
T Consensus 323 l~~~~~~~~~~~g~~~~A~~~~~~al~----~~p~~~----------~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~ 388 (530)
T 2ooe_A 323 LYFAYADYEESRMKYEKVHSIYNRLLA----IEDIDP----------TLVYIQYMKFARRAEGIKSGRMIFKKAREDART 388 (530)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH----SSSSCH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTC
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhC----ccccCc----------hHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCC
Confidence 445566777788999999999999998 555542 136777787777788888888888888887777
Q ss_pred CHHHHHHHHHH-HHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 006908 480 HVKGLYRRGMA-YMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLK 526 (626)
Q Consensus 480 ~~ka~~~~g~a-~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~ 526 (626)
+...++..+.. +..+|++++|+..|++|++++|++ ..+...+..+.
T Consensus 389 ~~~~~~~~a~~~~~~~~~~~~A~~~~e~al~~~p~~-~~~~~~~~~~~ 435 (530)
T 2ooe_A 389 RHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDI-PEYVLAYIDYL 435 (530)
T ss_dssp CTHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTC-HHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHcCChhHHHHHHHHHHHHCCCC-HHHHHHHHHHH
Confidence 77766665554 335788888888888888888876 45555555544
No 268
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=97.92 E-value=5e-05 Score=82.42 Aligned_cols=77 Identities=14% Similarity=0.144 Sum_probs=65.6
Q ss_pred hHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhcCCC---CH
Q 006908 447 NLLHLNVAACLLK----LGECRKSIEACNKVLDANPAHVKGLYRRGMAYMA----LGEFEEAQRDFEMMMKVDKS---SE 515 (626)
Q Consensus 447 ~~~~~Nla~~~~k----l~~~~~A~~~~~~aL~~dp~~~ka~~~~g~a~~~----lg~~~eA~~~~~kAl~l~P~---~~ 515 (626)
..+++|+|.+|.. .+++.+|+..+.++++. .++.+++++|.+|.. .+++++|+.+|++|++.+|+ +
T Consensus 363 ~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~- 439 (490)
T 2xm6_A 363 KAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQ--GLSAAQVQLGEIYYYGLGVERDYVQAWAWFDTASTNDMNLFGT- 439 (490)
T ss_dssp HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHHHCCHHHH-
T ss_pred HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCCCcCC-
Confidence 4588999999999 89999999999999886 479999999999999 89999999999999999854 4
Q ss_pred HHHHHHHHHHH
Q 006908 516 PDATAALSKLK 526 (626)
Q Consensus 516 ~~~~~~l~~l~ 526 (626)
..+...|..+.
T Consensus 440 ~~a~~~l~~~~ 450 (490)
T 2xm6_A 440 ENRNITEKKLT 450 (490)
T ss_dssp HHHHHHHTTSC
T ss_pred HHHHHHHHhcC
Confidence 45666665553
No 269
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=97.90 E-value=9.5e-05 Score=81.03 Aligned_cols=115 Identities=11% Similarity=0.137 Sum_probs=88.5
Q ss_pred HHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHH-------cCCHH-------HHHHHHHHHHH-hCCC
Q 006908 415 ELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLK-------LGECR-------KSIEACNKVLD-ANPA 479 (626)
Q Consensus 415 ~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~k-------l~~~~-------~A~~~~~~aL~-~dp~ 479 (626)
.+|+..|++|+. ..|.+ ..+|+++|..+.+ +|++. +|+..+.+|++ ++|+
T Consensus 255 ~~a~~~y~~al~----~~p~~-----------~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~ 319 (530)
T 2ooe_A 255 KRVMFAYEQCLL----VLGHH-----------PDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKK 319 (530)
T ss_dssp HHHHHHHHHHHH----HHTTC-----------HHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSS
T ss_pred HHHHHHHHHHHH----hCCCC-----------HHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcc
Confidence 478889999998 44554 4588899998886 79987 89999999997 8999
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Q 006908 480 HVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQEVESKARKQFKGLFD 545 (626)
Q Consensus 480 ~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 545 (626)
+..+|+.+|..+..+|++++|+..|++|++++|.+...+...+..+........+ .+..|.+...
T Consensus 320 ~~~l~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~-A~~~~~~Al~ 384 (530)
T 2ooe_A 320 NMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKS-GRMIFKKARE 384 (530)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHT
T ss_pred cHHHHHHHHHHHHhcCCHHHHHHHHHHHhCccccCchHHHHHHHHHHHHhcCHHH-HHHHHHHHHh
Confidence 9999999999999999999999999999999998733456665555444333322 3345544443
No 270
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=97.85 E-value=0.00018 Score=62.55 Aligned_cols=83 Identities=18% Similarity=0.239 Sum_probs=69.5
Q ss_pred hHHHHHHHHHHHHcCC---HHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHH
Q 006908 447 NLLHLNVAACLLKLGE---CRKSIEACNKVLDANPA-HVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAAL 522 (626)
Q Consensus 447 ~~~~~Nla~~~~kl~~---~~~A~~~~~~aL~~dp~-~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l 522 (626)
....+|.|.|+.+..+ ..+++..+...+..+|. .-..+|.+|.++.++|+|+.|+.+.+.+|+++|+| ..+....
T Consensus 40 ~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N-~QA~~Lk 118 (134)
T 3o48_A 40 IQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNN-KQVGALK 118 (134)
T ss_dssp HHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTC-HHHHHHH
T ss_pred hhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCC-HHHHHHH
Confidence 4577889999988875 56789999999998884 57899999999999999999999999999999999 5666666
Q ss_pred HHHHHHHH
Q 006908 523 SKLKKQRQ 530 (626)
Q Consensus 523 ~~l~~~~~ 530 (626)
..++.++.
T Consensus 119 ~~Ie~ki~ 126 (134)
T 3o48_A 119 SMVEDKIQ 126 (134)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66655554
No 271
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=97.82 E-value=0.00015 Score=74.83 Aligned_cols=65 Identities=18% Similarity=0.132 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC
Q 006908 449 LHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSS 514 (626)
Q Consensus 449 ~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~ 514 (626)
+|.-+|.+++..|+++.|+..+++|+.++| ++-+|..+|.++...|++++|++.|.+|+.++|..
T Consensus 279 ~~~alal~~l~~gd~d~A~~~l~rAl~Ln~-s~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~ 343 (372)
T 3ly7_A 279 IYQIKAVSALVKGKTDESYQAINTGIDLEM-SWLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGA 343 (372)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCc
Confidence 455577778888999999999999999997 57899999999999999999999999999999985
No 272
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.78 E-value=9e-05 Score=87.73 Aligned_cols=107 Identities=22% Similarity=0.309 Sum_probs=85.4
Q ss_pred HHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-
Q 006908 400 KIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANP- 478 (626)
Q Consensus 400 ~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp- 478 (626)
.+...|+.++..|+|++|+.+|.+|- .|..+|.|+.++|+|+.|++++.+|...++
T Consensus 1197 d~~~iGd~le~eg~YeeA~~~Y~kA~-----------------------ny~rLA~tLvkLge~q~AIEaarKA~n~~aW 1253 (1630)
T 1xi4_A 1197 HIQQVGDRCYDEKMYDAAKLLYNNVS-----------------------NFGRLASTLVHLGEYQAAVDGARKANSTRTW 1253 (1630)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHhhh-----------------------HHHHHHHHHHHhCCHHHHHHHHHHhCCHHHH
Confidence 45579999999999999999999863 477799999999999999999998843332
Q ss_pred ------------------------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 006908 479 ------------------------AHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQ 530 (626)
Q Consensus 479 ------------------------~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~~~~ 530 (626)
.++..+..++..|...|.|++|+..|++||.++|.+ .....+|..+..+.+
T Consensus 1254 kev~~acve~~Ef~LA~~cgl~Iiv~~deLeeli~yYe~~G~feEAI~LlE~aL~LeraH-~gmftELaiLyaKy~ 1328 (1630)
T 1xi4_A 1254 KEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAH-MGMFTELAILYSKFK 1328 (1630)
T ss_pred HHHHHHHhhhhHHHHHHHHHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHHHhccChhH-hHHHHHHHHHHHhCC
Confidence 134455677778888999999999999999999886 567767777665544
No 273
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.76 E-value=0.0003 Score=61.84 Aligned_cols=82 Identities=17% Similarity=0.231 Sum_probs=68.1
Q ss_pred hHHHHHHHHHHHHcCC---HHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHH
Q 006908 447 NLLHLNVAACLLKLGE---CRKSIEACNKVLDANPA-HVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAAL 522 (626)
Q Consensus 447 ~~~~~Nla~~~~kl~~---~~~A~~~~~~aL~~dp~-~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l 522 (626)
....+|.|.|+.+..+ -.+++..++..+.-.|. .-.++|.+|.+++++|+|++|+.+++.+|+++|+| ..+..+.
T Consensus 39 ~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n-~QA~~Lk 117 (144)
T 1y8m_A 39 IQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNN-KQVGALK 117 (144)
T ss_dssp HHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCC-HHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCc-HHHHHHH
Confidence 3477889999999875 45789999999998884 56899999999999999999999999999999998 5566655
Q ss_pred HHHHHHH
Q 006908 523 SKLKKQR 529 (626)
Q Consensus 523 ~~l~~~~ 529 (626)
..++.++
T Consensus 118 ~~Ie~~i 124 (144)
T 1y8m_A 118 SMVEDKI 124 (144)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555443
No 274
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=97.74 E-value=0.00028 Score=62.50 Aligned_cols=94 Identities=13% Similarity=0.059 Sum_probs=78.9
Q ss_pred cccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 006908 411 EGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMA 490 (626)
Q Consensus 411 ~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~~~ka~~~~g~a 490 (626)
.+++++|+..|++|.+ .... ... +|.+|.....+.+|+..+.++.+. .++.|++++|.+
T Consensus 8 ~~d~~~A~~~~~~aa~----~g~~-------------~a~--lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~ 66 (138)
T 1klx_A 8 KKDLKKAIQYYVKACE----LNEM-------------FGC--LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDF 66 (138)
T ss_dssp HHHHHHHHHHHHHHHH----TTCT-------------THH--HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHc----CCCH-------------hhh--HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHH
Confidence 3589999999999998 3221 123 999999999999999999999987 789999999999
Q ss_pred HHH----cCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q 006908 491 YMA----LGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQ 528 (626)
Q Consensus 491 ~~~----lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~~ 528 (626)
|.. .+++++|+.+|++|.+.. + ..+...|..+...
T Consensus 67 y~~G~g~~~d~~~A~~~~~~Aa~~g--~-~~a~~~Lg~~y~~ 105 (138)
T 1klx_A 67 YENGKYVKKDLRKAAQYYSKACGLN--D-QDGCLILGYKQYA 105 (138)
T ss_dssp HHHCSSSCCCHHHHHHHHHHHHHTT--C-HHHHHHHHHHHHH
T ss_pred HHcCCCCCccHHHHHHHHHHHHcCC--C-HHHHHHHHHHHHC
Confidence 999 899999999999999973 3 5677777776544
No 275
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.74 E-value=6.7e-05 Score=79.49 Aligned_cols=106 Identities=23% Similarity=0.308 Sum_probs=63.7
Q ss_pred HHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-
Q 006908 400 KIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANP- 478 (626)
Q Consensus 400 ~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp- 478 (626)
.+...|+.++..|+|++|+.+|.++ .-|.++|.|+.++|+|.+|++.+.++. +|
T Consensus 124 a~~~IGd~~~~~g~yeeA~~~Y~~a-----------------------~n~~~LA~~L~~Lg~yq~AVea~~KA~--~~~ 178 (449)
T 1b89_A 124 HIQQVGDRCYDEKMYDAAKLLYNNV-----------------------SNFGRLASTLVHLGEYQAAVDGARKAN--STR 178 (449)
T ss_dssp -------------CTTTHHHHHHHT-----------------------TCHHHHHHHHHTTTCHHHHHHHHHHHT--CHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHh-----------------------hhHHHHHHHHHHhccHHHHHHHHHHcC--Cch
Confidence 5556666666677777777666654 135556666666666666666666661 11
Q ss_pred --------------------------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 006908 479 --------------------------AHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQE 531 (626)
Q Consensus 479 --------------------------~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~~~~~ 531 (626)
.++.-+..+...|.+.|+|++|+..|+++|.+++.+ -.+...|..+..+.+.
T Consensus 179 ~Wk~v~~aCv~~~ef~lA~~~~l~L~~~ad~l~~lv~~Yek~G~~eEai~lLe~aL~le~ah-~~~ftel~il~~ky~p 256 (449)
T 1b89_A 179 TWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAH-MGMFTELAILYSKFKP 256 (449)
T ss_dssp HHHHHHHHHHHTTCHHHHHHTTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSTTCC-HHHHHHHHHHHHTTCH
T ss_pred hHHHHHHHHHHcCcHHHHHHHHHHHHhCHhhHHHHHHHHHHCCCHHHHHHHHHHHhCCcHHH-HHHHHHHHHHHHhcCH
Confidence 222333445578889999999999999999999988 5688888877665543
No 276
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=97.72 E-value=0.00015 Score=78.01 Aligned_cols=115 Identities=13% Similarity=0.074 Sum_probs=65.8
Q ss_pred HHHhhhchhhccc---cHHHHHHHHHHHHHhcccCCCCChh--------------------HH-----HHHhhhhhHHHH
Q 006908 400 KIRVTGNRLFKEG---KFELAKAKYEKVLRDFNHVNPQDDE--------------------EG-----KVFVGKRNLLHL 451 (626)
Q Consensus 400 ~~k~~Gn~~f~~g---~~~~A~~~y~~al~~l~~~~p~~~e--------------------e~-----~~~~~~~~~~~~ 451 (626)
.+...|..+++.| ++.+|+..|++++. ..+.... +- ... .-...+++
T Consensus 178 a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~----~g~~~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa-~g~~~a~~ 252 (452)
T 3e4b_A 178 CYVELATVYQKKQQPEQQAELLKQMEAGVS----RGTVTAQRVDSVARVLGDATLGTPDEKTAQALLEKIA-PGYPASWV 252 (452)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHH----TTCSCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG-GGSTHHHH
T ss_pred HHHHHHHHHHHcCCcccHHHHHHHHHHHHH----CCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc-CCCHHHHH
Confidence 4456777888888 99999999999987 3333211 00 001 12234555
Q ss_pred HHHHH-H--HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC-----CHHHHHHHHHHHHhcCCCCHHHHHHHHH
Q 006908 452 NVAAC-L--LKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALG-----EFEEAQRDFEMMMKVDKSSEPDATAALS 523 (626)
Q Consensus 452 Nla~~-~--~kl~~~~~A~~~~~~aL~~dp~~~ka~~~~g~a~~~lg-----~~~eA~~~~~kAl~l~P~~~~~~~~~l~ 523 (626)
|+|.+ + ...+++.+|+..+.++++. .++.|++++|.+|. .| ++++|+.+|++|. |.+ ..+...|.
T Consensus 253 ~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~--g~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa---~g~-~~A~~~Lg 325 (452)
T 3e4b_A 253 SLAQLLYDFPELGDVEQMMKYLDNGRAA--DQPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV---GRE-VAADYYLG 325 (452)
T ss_dssp HHHHHHHHSGGGCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT---TTC-HHHHHHHH
T ss_pred HHHHHHHhCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh---CCC-HHHHHHHH
Confidence 56655 2 3455666666666665543 35666666666665 33 6666666666665 444 44555555
Q ss_pred HHH
Q 006908 524 KLK 526 (626)
Q Consensus 524 ~l~ 526 (626)
.+.
T Consensus 326 ~~y 328 (452)
T 3e4b_A 326 QIY 328 (452)
T ss_dssp HHH
T ss_pred HHH
Confidence 544
No 277
>3gty_X Trigger factor, TF; chaperone-client complex, cell cycle, cell division, chapero isomerase, rotamase, ribonucleoprotein, binding; 3.40A {Thermotoga maritima} PDB: 3gu0_A
Probab=97.67 E-value=0.00011 Score=78.31 Aligned_cols=76 Identities=13% Similarity=0.159 Sum_probs=64.0
Q ss_pred CCCCCEEEEEEEEEEcCCcEEEeeccCCCCCCcceEEEeCCCccchhHHhhcCCCCCCcEEEEEeeccccccCCCCCCCC
Q 006908 45 PSDGDQVAYHCTVRTLDGVIVESTRSEYGGKGIPIRHVLGKSKILLGLLEGIPTMLKGEVSMFKMKPQMHYGEDDCPVAA 124 (626)
Q Consensus 45 p~~gd~V~v~y~~~~~dG~~~~st~~~~~~~~~p~~~~lg~~~~~~gle~~l~~m~~Ge~~~~~ip~~~~~g~~~~~~~~ 124 (626)
++.||.|+++|+++ .||..|+++. +.++.+.+|.+. + |+++|.||++|+.++|.+..
T Consensus 155 a~~gD~V~id~~~~-~dG~~~~~~~------~~~~~l~~g~~~--~-fe~~liG~k~Ge~~~~~vtF------------- 211 (433)
T 3gty_X 155 AEAGDLVRVNMEVY-NEEGKKLTSR------EYEYVISEDEDR--P-FVKDLVGKKKGDVVEIEREY------------- 211 (433)
T ss_dssp CCTTSEEEEEEEEE-CTTSCEEEEE------EEEEECCSSCCC--T-THHHHTTCCTTCEEEEEEEE-------------
T ss_pred cCCCCEEEEEEEEE-ECCEECcCCC------CCCeEEEecCCc--h-HHHHhCCCCCCceEEEEEee-------------
Confidence 67899999999998 6999999764 357888898887 4 99999999999999998843
Q ss_pred CCCCCCCceEEEEEEeeeeccccc
Q 006908 125 PSTFPKDEELHFEIEMIDFAKAKI 148 (626)
Q Consensus 125 ~~~i~~~~~lv~~v~l~~~~~~~~ 148 (626)
+|.+.+|.|+|.++.....
T Consensus 212 -----aGk~a~F~VtV~~Ik~~~l 230 (433)
T 3gty_X 212 -----EGKKYTYKLEVEEVYKRTL 230 (433)
T ss_dssp -----TTEEEEEEEEEEEEEEECC
T ss_pred -----CCCeEEEEEEEEEEEEecC
Confidence 2689999999999975443
No 278
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=97.64 E-value=0.00045 Score=74.75 Aligned_cols=92 Identities=14% Similarity=0.103 Sum_probs=45.4
Q ss_pred HHHhhhchhhc----cccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHH----cCCHHHHHHHHH
Q 006908 400 KIRVTGNRLFK----EGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLK----LGECRKSIEACN 471 (626)
Q Consensus 400 ~~k~~Gn~~f~----~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~k----l~~~~~A~~~~~ 471 (626)
.+...|..++. .+++++|+.+|++|+.. . + ..+++++|.+|.. .+++.+|+..+.
T Consensus 77 a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~----~--~-----------~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~ 139 (490)
T 2xm6_A 77 AEYVLGLRYMNGEGVPQDYAQAVIWYKKAALK----G--L-----------PQAQQNLGVMYHEGNGVKVDKAESVKWFR 139 (490)
T ss_dssp HHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT----T--C-----------HHHHHHHHHHHHHTSSSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC----C--C-----------HHHHHHHHHHHHcCCCCCCCHHHHHHHHH
Confidence 44455666665 66677777777776651 0 1 1234444444444 444444444444
Q ss_pred HHHHhCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhc
Q 006908 472 KVLDANPAHVKGLYRRGMAYMA----LGEFEEAQRDFEMMMKV 510 (626)
Q Consensus 472 ~aL~~dp~~~ka~~~~g~a~~~----lg~~~eA~~~~~kAl~l 510 (626)
++++. .++.+++++|.+|.. .+++++|+.+|++|++.
T Consensus 140 ~a~~~--~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~ 180 (490)
T 2xm6_A 140 LAAEQ--GRDSGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQ 180 (490)
T ss_dssp HHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred HHHHC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC
Confidence 44432 244444444444444 44444444444444443
No 279
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=97.64 E-value=0.00016 Score=71.87 Aligned_cols=89 Identities=11% Similarity=0.052 Sum_probs=76.4
Q ss_pred ccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHc-----CCHHHHHHHHHHHHHhCCCC-HHHHH
Q 006908 412 GKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKL-----GECRKSIEACNKVLDANPAH-VKGLY 485 (626)
Q Consensus 412 g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl-----~~~~~A~~~~~~aL~~dp~~-~ka~~ 485 (626)
+....|....++|+. +.|.. +...+|.-+|..|.+. |+.++|..++++||+++|+. +.+++
T Consensus 177 ~~l~~A~a~lerAle----LDP~~---------~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v 243 (301)
T 3u64_A 177 DTVHAAVMMLERACD----LWPSY---------QEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHI 243 (301)
T ss_dssp HHHHHHHHHHHHHHH----HCTTH---------HHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHH
T ss_pred HhHHHHHHHHHHHHH----hCCCc---------ccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHH
Confidence 356777888888887 55542 1256899999999996 99999999999999999975 99999
Q ss_pred HHHHHHHHc-CCHHHHHHHHHHHHhcCCC
Q 006908 486 RRGMAYMAL-GEFEEAQRDFEMMMKVDKS 513 (626)
Q Consensus 486 ~~g~a~~~l-g~~~eA~~~~~kAl~l~P~ 513 (626)
..|..++.. +++++|.+.|++|+..+|.
T Consensus 244 ~YA~~l~~~~gd~~~a~~~L~kAL~a~p~ 272 (301)
T 3u64_A 244 TYADALCIPLNNRAGFDEALDRALAIDPE 272 (301)
T ss_dssp HHHHHTTTTTTCHHHHHHHHHHHHHCCGG
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHcCCCC
Confidence 999999885 9999999999999999776
No 280
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=97.63 E-value=0.00026 Score=63.52 Aligned_cols=79 Identities=11% Similarity=0.094 Sum_probs=63.8
Q ss_pred HHHHHhhhchhhccc---cHHHHHHHHHHHHHhcccCC-CCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 006908 398 AEKIRVTGNRLFKEG---KFELAKAKYEKVLRDFNHVN-PQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKV 473 (626)
Q Consensus 398 a~~~k~~Gn~~f~~g---~~~~A~~~y~~al~~l~~~~-p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~a 473 (626)
.+..++.|..+.+.+ ++.+|+..++..++. . |. ....+++|+|.+|+++++|.+|+.+|+++
T Consensus 32 ~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~----~~p~----------~~rd~lY~LAv~~~kl~~Y~~A~~y~~~l 97 (152)
T 1pc2_A 32 KSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPK----GSKE----------EQRDYVFYLAVGNYRLKEYEKALKYVRGL 97 (152)
T ss_dssp HHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHH----SCHH----------HHHHHHHHHHHHHHHTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc----CCcc----------chHHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 355667888888877 788999999999882 2 21 12458999999999999999999999999
Q ss_pred HHhCCCCHHHHHHHHHH
Q 006908 474 LDANPAHVKGLYRRGMA 490 (626)
Q Consensus 474 L~~dp~~~ka~~~~g~a 490 (626)
|+++|+|..|..-+-.+
T Consensus 98 L~ieP~n~QA~~Lk~~i 114 (152)
T 1pc2_A 98 LQTEPQNNQAKELERLI 114 (152)
T ss_dssp HHHCTTCHHHHHHHHHH
T ss_pred HhcCCCCHHHHHHHHHH
Confidence 99999998887655443
No 281
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.62 E-value=0.0002 Score=84.83 Aligned_cols=106 Identities=18% Similarity=0.143 Sum_probs=81.1
Q ss_pred hhhchhhccccHHHHHHHHHHHHHhcccC-----CCCChhHHHHH--hhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 006908 403 VTGNRLFKEGKFELAKAKYEKVLRDFNHV-----NPQDDEEGKVF--VGKRNLLHLNVAACLLKLGECRKSIEACNKVLD 475 (626)
Q Consensus 403 ~~Gn~~f~~g~~~~A~~~y~~al~~l~~~-----~p~~~ee~~~~--~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~ 475 (626)
+.|..+...|.|++|..+|+++....... .-.+-+....+ +-....+|+++|.++..+|+|.+|+.+|.+|
T Consensus 1054 eIA~Iai~lglyEEAf~IYkKa~~~~~A~~VLie~i~nldrAiE~Aervn~p~vWsqLAKAql~~G~~kEAIdsYiKA-- 1131 (1630)
T 1xi4_A 1054 DIANIAISNELFEEAFAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKA-- 1131 (1630)
T ss_pred HHHHHHHhCCCHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCHHHHHHHHHhc--
Confidence 45889999999999999999864311100 00000000000 1122468999999999999999999999887
Q ss_pred hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC
Q 006908 476 ANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKS 513 (626)
Q Consensus 476 ~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~ 513 (626)
+++.+|++.|.++..+|+|++|+++|.+|.+.+++
T Consensus 1132 ---dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e 1166 (1630)
T 1xi4_A 1132 ---DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARE 1166 (1630)
T ss_pred ---CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhccc
Confidence 89999999999999999999999999999998865
No 282
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.54 E-value=0.00044 Score=72.94 Aligned_cols=118 Identities=12% Similarity=0.106 Sum_probs=86.6
Q ss_pred HHHHHHHHHhhhchhhccccHHHHHHHHHHHHHhcccC------------------CCCChhHHHH-------------H
Q 006908 394 IMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHV------------------NPQDDEEGKV-------------F 442 (626)
Q Consensus 394 ~~~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~------------------~p~~~ee~~~-------------~ 442 (626)
.-.....+.+.|..+++.|+|++|+..|.+++.....+ .+.+.+.... .
T Consensus 51 ~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 130 (434)
T 4b4t_Q 51 RNEQETSILELGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKR 130 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSC
T ss_pred hhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCc
Confidence 33445566777888888888888888887776543322 1122111100 0
Q ss_pred hhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC
Q 006908 443 VGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN------PAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVD 511 (626)
Q Consensus 443 ~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~d------p~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~ 511 (626)
..+.+.++.++|.+|..+|+|.+|+..+.+++... +..+.++..+|++|..+|+|++|+..|++|+.+.
T Consensus 131 ~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~ 205 (434)
T 4b4t_Q 131 VFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAA 205 (434)
T ss_dssp CSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHh
Confidence 12346789999999999999999999999998762 3347799999999999999999999999999874
No 283
>3gty_X Trigger factor, TF; chaperone-client complex, cell cycle, cell division, chapero isomerase, rotamase, ribonucleoprotein, binding; 3.40A {Thermotoga maritima} PDB: 3gu0_A
Probab=97.53 E-value=0.00021 Score=76.18 Aligned_cols=74 Identities=9% Similarity=0.081 Sum_probs=63.0
Q ss_pred CCCCCCeEEEEEEEEeCCCcEEEecCCCccEEEEcCCCCccchHHHhhccCCCCcEEEEEEeCCccCCCCCCCCCCCcce
Q 006908 168 TPRAPYEVKAWISAKTGDGKLILSHREGEPYFFTFGKSEVPKGLEMGIGTMTREEKAVIYVTSQYLTPSPLMPVVEGCEE 247 (626)
Q Consensus 168 ~~~~g~~V~v~y~~~~~~g~~~~s~~~~~p~~~~~g~g~~~~gle~~l~~mk~Ge~~~~~v~~~~~~g~~~~~~ip~~~~ 247 (626)
.+..||.|+++|+++ .||..|+++. +.++.+.+|.|. + |+.+|.||++|++++|.+. | ++.+
T Consensus 154 ~a~~gD~V~id~~~~-~dG~~~~~~~-~~~~~l~~g~~~--~-fe~~liG~k~Ge~~~~~vt----F---------aGk~ 215 (433)
T 3gty_X 154 PAEAGDLVRVNMEVY-NEEGKKLTSR-EYEYVISEDEDR--P-FVKDLVGKKKGDVVEIERE----Y---------EGKK 215 (433)
T ss_dssp CCCTTSEEEEEEEEE-CTTSCEEEEE-EEEEECCSSCCC--T-THHHHTTCCTTCEEEEEEE----E---------TTEE
T ss_pred ccCCCCEEEEEEEEE-ECCEECcCCC-CCCeEEEecCCc--h-HHHHhCCCCCCceEEEEEe----e---------CCCe
Confidence 467899999999985 7999998654 378888999887 4 9999999999999999983 2 4689
Q ss_pred EEEEEEEeeEEe
Q 006908 248 VHFEVELVHLIQ 259 (626)
Q Consensus 248 l~~~v~l~~~~~ 259 (626)
..|.|+|+++..
T Consensus 216 a~F~VtV~~Ik~ 227 (433)
T 3gty_X 216 YTYKLEVEEVYK 227 (433)
T ss_dssp EEEEEEEEEEEE
T ss_pred EEEEEEEEEEEE
Confidence 999999999854
No 284
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.51 E-value=0.00079 Score=60.89 Aligned_cols=117 Identities=15% Similarity=0.156 Sum_probs=84.0
Q ss_pred HHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC---
Q 006908 401 IRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN--- 477 (626)
Q Consensus 401 ~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~d--- 477 (626)
++++...++..+.|+.|+-.+..++..... +++- ..-.....++..+|.+++..++|.+|...|.+||.+.
T Consensus 23 l~dqik~L~d~~LY~sA~~La~lLlSl~~~-~~~~-----~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l 96 (167)
T 3ffl_A 23 VIDHVRDMAAAGLHSNVRLLSSLLLTLSNN-NPEL-----FSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKAL 96 (167)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-STTS-----SCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhhcC-Cccc-----ccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHH
Confidence 456677788899999999999998885432 1110 0012346688889999999999999999999998653
Q ss_pred CCC----------------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q 006908 478 PAH----------------------VKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKL 525 (626)
Q Consensus 478 p~~----------------------~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l 525 (626)
+.+ ....|+.+.||.+++++++|+..++..-.-.- . +.+.-.|+++
T Consensus 97 ~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~Ip~k~R-t-~kvnm~LakL 164 (167)
T 3ffl_A 97 SKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDGIPSRQR-T-PKINMLLANL 164 (167)
T ss_dssp --------------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHTSCGGGC-C-HHHHHHHHHH
T ss_pred hcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhcCCchhc-C-HHHHHHHHHH
Confidence 111 25779999999999999999998875322211 1 4455556554
No 285
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=97.50 E-value=0.00011 Score=78.51 Aligned_cols=95 Identities=11% Similarity=0.043 Sum_probs=77.0
Q ss_pred hHHHHHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHH
Q 006908 393 GIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNK 472 (626)
Q Consensus 393 e~~~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~ 472 (626)
+-...+..+.+.|..+..+|+|++|+.+|+++|..+....+.+ +...+..++|+|.+|..+|+|++|+..+.+
T Consensus 324 ~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~-------Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~ 396 (429)
T 3qwp_A 324 INIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGS-------HPVRGVQVMKVGKLQLHQGMFPQAMKNLRL 396 (429)
T ss_dssp TSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSS-------CHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCC-------ChHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 3456788899999999999999999999999999877655544 445678999999999999999999999999
Q ss_pred HHHhC-----CCC---HHHHHHHHHHHHHc
Q 006908 473 VLDAN-----PAH---VKGLYRRGMAYMAL 494 (626)
Q Consensus 473 aL~~d-----p~~---~ka~~~~g~a~~~l 494 (626)
|+++- |++ ..++.+++.++..+
T Consensus 397 Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~ 426 (429)
T 3qwp_A 397 AFDIMRVTHGREHSLIEDLILLLEECDANI 426 (429)
T ss_dssp HHHHHHHHTCTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCChHHHHHHHHHHHHHHHH
Confidence 99763 555 34556666666544
No 286
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=97.45 E-value=0.00072 Score=72.62 Aligned_cols=91 Identities=11% Similarity=0.017 Sum_probs=62.7
Q ss_pred HHHhhhch-h--hccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcC-----CHHHHHHHHH
Q 006908 400 KIRVTGNR-L--FKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLG-----ECRKSIEACN 471 (626)
Q Consensus 400 ~~k~~Gn~-~--f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~-----~~~~A~~~~~ 471 (626)
.+...|.. + ...+++.+|+.+|++|+. .. + ..+++|+|.+|. .| ++.+|+..+.
T Consensus 250 a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~----~g--~-----------~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~ 311 (452)
T 3e4b_A 250 SWVSLAQLLYDFPELGDVEQMMKYLDNGRA----AD--Q-----------PRAELLLGKLYY-EGKWVPADAKAAEAHFE 311 (452)
T ss_dssp HHHHHHHHHHHSGGGCCHHHHHHHHHHHHH----TT--C-----------HHHHHHHHHHHH-HCSSSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCHHHHHHHHHHHHH----CC--C-----------HHHHHHHHHHHH-cCCCCCCCHHHHHHHHH
Confidence 33445554 3 457788888888888876 11 1 346777777776 44 7778888777
Q ss_pred HHHHhCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhcC
Q 006908 472 KVLDANPAHVKGLYRRGMAYMA----LGEFEEAQRDFEMMMKVD 511 (626)
Q Consensus 472 ~aL~~dp~~~ka~~~~g~a~~~----lg~~~eA~~~~~kAl~l~ 511 (626)
++. +.++.|++++|.+|.. ..++++|+.+|++|.+..
T Consensus 312 ~Aa---~g~~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g 352 (452)
T 3e4b_A 312 KAV---GREVAADYYLGQIYRRGYLGKVYPQKALDHLLTAARNG 352 (452)
T ss_dssp TTT---TTCHHHHHHHHHHHHTTTTSSCCHHHHHHHHHHHHTTT
T ss_pred HHh---CCCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHhhC
Confidence 777 6777777887777766 347777777777777653
No 287
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.45 E-value=0.00037 Score=73.52 Aligned_cols=104 Identities=13% Similarity=0.080 Sum_probs=86.6
Q ss_pred HHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 006908 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 477 (626)
Q Consensus 398 a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~d 477 (626)
+..+...|..++..|+|.+|+..+++++..+...... ...+.++++++.+|..+++|.+|...+.+++.+.
T Consensus 135 ~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~ 205 (434)
T 4b4t_Q 135 HSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDK---------PSLVDVHLLESKVYHKLRNLAKSKASLTAARTAA 205 (434)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCS---------THHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccc---------hhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHh
Confidence 5566788999999999999999999999866544322 2346789999999999999999999999999774
Q ss_pred C---CC----HHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Q 006908 478 P---AH----VKGLYRRGMAYMALGEFEEAQRDFEMMMKV 510 (626)
Q Consensus 478 p---~~----~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l 510 (626)
+ .. ...+...|..+...++|++|..+|.++++.
T Consensus 206 ~~~~~~~~~~~~~~~~~g~~~~~~~~y~~A~~~~~~a~~~ 245 (434)
T 4b4t_Q 206 NSIYCPTQTVAELDLMSGILHCEDKDYKTAFSYFFESFES 245 (434)
T ss_dssp HHSCCCHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHH
T ss_pred hcCCCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 3 22 456778899999999999999999999875
No 288
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.40 E-value=0.00023 Score=75.97 Aligned_cols=75 Identities=11% Similarity=0.032 Sum_probs=65.2
Q ss_pred HHHHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 006908 395 MDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVL 474 (626)
Q Consensus 395 ~~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL 474 (626)
...+..+.+.|..|..+|+|++|+.+|+++|.......+.+ +...+..++|+|.+|..+|+|++|+..+.+||
T Consensus 337 p~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~-------Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al 409 (433)
T 3qww_A 337 VYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVY-------SLNVASMWLKLGRLYMGLENKAAGEKALKKAI 409 (433)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSS-------CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCC-------ChHHHHHHHHHHHHHHhccCHHHHHHHHHHHH
Confidence 45677888999999999999999999999999876655444 34567889999999999999999999999999
Q ss_pred Hh
Q 006908 475 DA 476 (626)
Q Consensus 475 ~~ 476 (626)
++
T Consensus 410 ~i 411 (433)
T 3qww_A 410 AI 411 (433)
T ss_dssp HH
T ss_pred HH
Confidence 76
No 289
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=97.30 E-value=0.00087 Score=67.83 Aligned_cols=92 Identities=15% Similarity=0.050 Sum_probs=74.0
Q ss_pred hchhhccc--cHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------
Q 006908 405 GNRLFKEG--KFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA------ 476 (626)
Q Consensus 405 Gn~~f~~g--~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~------ 476 (626)
|...+..| ++..|...|+++.. ..|.. ....+++| |++++|+|++|...+..+++.
T Consensus 183 a~v~l~~g~~~~q~A~~~f~El~~----~~p~~---------~~~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~~~~ 246 (310)
T 3mv2_B 183 SYIKFATNKETATSNFYYYEELSQ----TFPTW---------KTQLGLLN---LHLQQRNIAEAQGIVELLLSDYYSVEQ 246 (310)
T ss_dssp HHHHHHHTCSTTTHHHHHHHHHHT----TSCSH---------HHHHHHHH---HHHHHTCHHHHHHHHHHHHSHHHHTTT
T ss_pred HHHHHHhCCccHHHHHHHHHHHHH----hCCCc---------ccHHHHHH---HHHHcCCHHHHHHHHHHHHHhcccccc
Confidence 43344444 89999999999877 33320 01234555 899999999999999988876
Q ss_pred ----CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC
Q 006908 477 ----NPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSS 514 (626)
Q Consensus 477 ----dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~ 514 (626)
+|+++.++.++..+...+|+ +|.+.+.++.+++|++
T Consensus 247 k~~~~p~~~~~LaN~i~l~~~lgk--~a~~l~~qL~~~~P~h 286 (310)
T 3mv2_B 247 KENAVLYKPTFLANQITLALMQGL--DTEDLTNQLVKLDHEH 286 (310)
T ss_dssp CHHHHSSHHHHHHHHHHHHHHTTC--TTHHHHHHHHHTTCCC
T ss_pred cccCCCCCHHHHHHHHHHHHHhCh--HHHHHHHHHHHhCCCC
Confidence 58999999999999999998 8999999999999998
No 290
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.12 E-value=0.0012 Score=54.32 Aligned_cols=68 Identities=16% Similarity=0.173 Sum_probs=56.6
Q ss_pred HHHHHhhhchhhcccc---HHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 006908 398 AEKIRVTGNRLFKEGK---FELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVL 474 (626)
Q Consensus 398 a~~~k~~Gn~~f~~g~---~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL 474 (626)
+..+...|..++..++ ..+|...+++||. +.|.+ ..+++.+|..+++.|+|.+|+.++.++|
T Consensus 6 ~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~----~dp~~-----------~rA~~~lg~~~~~~g~y~~Ai~~w~~~l 70 (93)
T 3bee_A 6 ATQLAAKATTLYYLHKQAMTDEVSLLLEQALQ----LEPYN-----------EAALSLIANDHFISFRFQEAIDTWVLLL 70 (93)
T ss_dssp HHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHH----HCcCC-----------HHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3455566777764444 7999999999999 77777 5688889999999999999999999999
Q ss_pred HhCCCC
Q 006908 475 DANPAH 480 (626)
Q Consensus 475 ~~dp~~ 480 (626)
+.+|.+
T Consensus 71 ~~~p~~ 76 (93)
T 3bee_A 71 DSNDPN 76 (93)
T ss_dssp TCCCTT
T ss_pred hhCCCC
Confidence 999973
No 291
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=97.10 E-value=0.01 Score=62.23 Aligned_cols=127 Identities=16% Similarity=0.159 Sum_probs=98.4
Q ss_pred HHHHHHhhhchhhccccHHHHHHHHHHHHHhcccC-CCC---C---hhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHH
Q 006908 397 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHV-NPQ---D---DEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEA 469 (626)
Q Consensus 397 ~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~-~p~---~---~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~ 469 (626)
..+.+...|......++...|+..|.+|+..+..- .++ . ..+...+......+...++.+++.+|++.+|+..
T Consensus 114 ~f~~l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~ 193 (388)
T 2ff4_A 114 RFVAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAE 193 (388)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
Confidence 44555566666777889999999999999865321 111 1 1223446667777888899999999999999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh-------cCCCCHHHHHHHHHHH
Q 006908 470 CNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMK-------VDKSSEPDATAALSKL 525 (626)
Q Consensus 470 ~~~aL~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~-------l~P~~~~~~~~~l~~l 525 (626)
+..++..+|-+-.+|..+-.||...|+..+|++.|+++-. ++|. +..+.....+
T Consensus 194 l~~~~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~~L~~eLG~~P~--~~l~~l~~~i 254 (388)
T 2ff4_A 194 LEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPG--PTLRALNERI 254 (388)
T ss_dssp HHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCCC--HHHHHHHHHH
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCC--HHHHHHHHHH
Confidence 9999999999999999999999999999999999988644 4776 4455544443
No 292
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=96.85 E-value=0.0072 Score=60.00 Aligned_cols=62 Identities=18% Similarity=0.233 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHc-----CCHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Q 006908 463 CRKSIEACNKVLDANPA--HVKGLYRRGMAYMAL-----GEFEEAQRDFEMMMKVDKSSEPDATAALSK 524 (626)
Q Consensus 463 ~~~A~~~~~~aL~~dp~--~~ka~~~~g~a~~~l-----g~~~eA~~~~~kAl~l~P~~~~~~~~~l~~ 524 (626)
...|....++|+++||+ +..||..+|..|..+ |+.+.|.+.|++||+++|+...++...+..
T Consensus 179 l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~ 247 (301)
T 3u64_A 179 VHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYAD 247 (301)
T ss_dssp HHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHH
Confidence 67899999999999999 567999999999996 999999999999999999642455555444
No 293
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=96.82 E-value=0.0086 Score=60.49 Aligned_cols=100 Identities=7% Similarity=-0.023 Sum_probs=77.8
Q ss_pred HHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-
Q 006908 401 IRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANPA- 479 (626)
Q Consensus 401 ~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~- 479 (626)
+.-.|..++..|++++|++.+.+++. ..|.. ....++.-++.+++++|+.+.|.+.+.+..+.+|+
T Consensus 103 ~~~la~i~~~~g~~eeAL~~l~~~i~----~~~~~---------~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~ 169 (310)
T 3mv2_B 103 LYLLATAQAILGDLDKSLETCVEGID----NDEAE---------GTTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDT 169 (310)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHT----SSCST---------THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHhc----cCCCc---------CcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccc
Confidence 34678888889999999999999987 33310 11347777899999999999999999999999883
Q ss_pred ---CHHHHHHHHHH--HHHcC--CHHHHHHHHHHHHhcCCC
Q 006908 480 ---HVKGLYRRGMA--YMALG--EFEEAQRDFEMMMKVDKS 513 (626)
Q Consensus 480 ---~~ka~~~~g~a--~~~lg--~~~eA~~~~~kAl~l~P~ 513 (626)
+-..+..++.+ .+..| ++.+|...|+++....|+
T Consensus 170 ~~~~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~~p~ 210 (310)
T 3mv2_B 170 VSGDNEMILNLAESYIKFATNKETATSNFYYYEELSQTFPT 210 (310)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTTSCS
T ss_pred cccchHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhCCC
Confidence 23445566555 55556 899999999999888876
No 294
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=96.54 E-value=0.013 Score=50.66 Aligned_cols=43 Identities=14% Similarity=0.160 Sum_probs=37.8
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 006908 447 NLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGM 489 (626)
Q Consensus 447 ~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~~~ka~~~~g~ 489 (626)
-.+++.+|.+++|+|+|.+|+.+|..+|+++|+|..|.-.+..
T Consensus 74 Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~Lk~~ 116 (126)
T 1nzn_A 74 RDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERL 116 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 4588889999999999999999999999999999887655443
No 295
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=96.29 E-value=0.023 Score=49.95 Aligned_cols=73 Identities=12% Similarity=0.056 Sum_probs=51.3
Q ss_pred hhhchhhccc---cHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 006908 403 VTGNRLFKEG---KFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANPA 479 (626)
Q Consensus 403 ~~Gn~~f~~g---~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~ 479 (626)
+.|..+.+.. +-.+++.+++..++ ..|.. +-.|++.+|.+++|+++|.+|+.+|..+|+++|+
T Consensus 44 ~YAw~Lv~S~~~~di~~GI~LLe~l~~----~~~~~----------~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~ 109 (144)
T 1y8m_A 44 NYAWGLIKSTDVNDERLGVKILTDIYK----EAESR----------RRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERN 109 (144)
T ss_dssp HHHHHHHHSSSHHHHHHHHHHHHHHHH----HCCST----------HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHh----cCccc----------hhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCC
Confidence 3444444433 23456666666665 23322 2347888999999999999999999999999999
Q ss_pred CHHHHHHHHH
Q 006908 480 HVKGLYRRGM 489 (626)
Q Consensus 480 ~~ka~~~~g~ 489 (626)
|..|.-.+..
T Consensus 110 n~QA~~Lk~~ 119 (144)
T 1y8m_A 110 NKQVGALKSM 119 (144)
T ss_dssp CHHHHHHHHH
T ss_pred cHHHHHHHHH
Confidence 9877654433
No 296
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=96.23 E-value=0.018 Score=49.93 Aligned_cols=44 Identities=11% Similarity=0.058 Sum_probs=38.0
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 006908 447 NLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMA 490 (626)
Q Consensus 447 ~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~~~ka~~~~g~a 490 (626)
-.+++-+|.+++|+|+|.+|+.+|..+|+++|+|..|.-.+..+
T Consensus 78 Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk~~I 121 (134)
T 3o48_A 78 RECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSMV 121 (134)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHHHHH
Confidence 45788899999999999999999999999999998876554433
No 297
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=96.16 E-value=0.0063 Score=64.42 Aligned_cols=147 Identities=12% Similarity=0.053 Sum_probs=99.3
Q ss_pred hhHHHHHHHHHhhhchhhccccHHHHHHHHHHHHHhcc--c----CCCCChhHHHHHhh----hhhHHHHHHHHHHHHcC
Q 006908 392 DGIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFN--H----VNPQDDEEGKVFVG----KRNLLHLNVAACLLKLG 461 (626)
Q Consensus 392 ~e~~~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~--~----~~p~~~ee~~~~~~----~~~~~~~Nla~~~~kl~ 461 (626)
...+..+..+...|..+++.|+|+.|++.|.+|...-. . +.-..+-+..+... ..+.-...+..+|.++|
T Consensus 142 ~~~Y~~a~n~~~LA~~L~~Lg~yq~AVea~~KA~~~~~Wk~v~~aCv~~~ef~lA~~~~l~L~~~ad~l~~lv~~Yek~G 221 (449)
T 1b89_A 142 KLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRG 221 (449)
T ss_dssp HHHHHHTTCHHHHHHHHHTTTCHHHHHHHHHHHTCHHHHHHHHHHHHHTTCHHHHHHTTTTTTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHhhhHHHHHHHHHHhccHHHHHHHHHHcCCchhHHHHHHHHHHcCcHHHHHHHHHHHHhCHhhHHHHHHHHHHCC
Confidence 34455566777899999999999999999999843100 0 00000000000000 00111234668899999
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH--cCCHHHHHHHHHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHH
Q 006908 462 ECRKSIEACNKVLDANPAHVKGLYRRGMAYMA--LGEFEEAQRDFEMMMKVDK-----SSEPDATAALSKLKKQRQEVES 534 (626)
Q Consensus 462 ~~~~A~~~~~~aL~~dp~~~ka~~~~g~a~~~--lg~~~eA~~~~~kAl~l~P-----~~~~~~~~~l~~l~~~~~~~~~ 534 (626)
+|.+|+..++++|.+++.+...+.-+|.++.+ .++..++++.|...+.+.| .+ ...+.++..+.-...+...
T Consensus 222 ~~eEai~lLe~aL~le~ah~~~ftel~il~~ky~p~k~~ehl~~~~~~ini~k~~~~~~~-~~~w~e~~~ly~~~~e~d~ 300 (449)
T 1b89_A 222 YFEELITMLEAALGLERAHMGMFTELAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQ-AHLWAELVFLYDKYEEYDN 300 (449)
T ss_dssp CHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHSTTSCHHHHHHHHHT-TTCHHHHHHHHHHTTCHHH
T ss_pred CHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCcHHHHHHHH-HHHHHHHHHHHHhhchHHH
Confidence 99999999999999999999999999998876 5778899999988877765 43 3566677777655555554
Q ss_pred HHHHH
Q 006908 535 KARKQ 539 (626)
Q Consensus 535 ~~~~~ 539 (626)
+-..+
T Consensus 301 A~~tm 305 (449)
T 1b89_A 301 AIITM 305 (449)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44333
No 298
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=95.94 E-value=0.017 Score=52.18 Aligned_cols=95 Identities=13% Similarity=0.179 Sum_probs=63.7
Q ss_pred HHHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCCh---------hHHHH-HhhhhhHHHHHHHHHHHHcCCHHH
Q 006908 396 DEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDD---------EEGKV-FVGKRNLLHLNVAACLLKLGECRK 465 (626)
Q Consensus 396 ~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~---------ee~~~-~~~~~~~~~~Nla~~~~kl~~~~~ 465 (626)
..++.+.-.|+.+|.+++|.+|...|++||.....+.-... ..... -...-+.+.+.+|.||.+++++.+
T Consensus 61 ~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~ 140 (167)
T 3ffl_A 61 QKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKD 140 (167)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--------------------CCCCHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHH
Confidence 35777888999999999999999999999986553211000 00000 000113577889999999999999
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHH
Q 006908 466 SIEACNKVLDANPAHVKGLYRRGMAY 491 (626)
Q Consensus 466 A~~~~~~aL~~dp~~~ka~~~~g~a~ 491 (626)
|+...+.+ -..-.+++...-+|+.|
T Consensus 141 Ai~~Le~I-p~k~Rt~kvnm~LakLy 165 (167)
T 3ffl_A 141 AIAILDGI-PSRQRTPKINMLLANLY 165 (167)
T ss_dssp HHHHHHTS-CGGGCCHHHHHHHHHHC
T ss_pred HHHHHhcC-CchhcCHHHHHHHHHHh
Confidence 99986653 11225677777777655
No 299
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=95.89 E-value=0.17 Score=44.74 Aligned_cols=112 Identities=6% Similarity=-0.003 Sum_probs=81.6
Q ss_pred HHHHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 006908 395 MDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVL 474 (626)
Q Consensus 395 ~~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL 474 (626)
+.-+..+-..|+-+-. +-.++-+..|++|+..++ |.. .......+.+|.+-|.- ..+++.++|.+.|..++
T Consensus 17 ~~yl~llE~~g~p~~d-~~l~rlrd~YerAia~~P---p~k----~~~wrrYI~LWIrYA~~-~ei~D~d~aR~vy~~a~ 87 (161)
T 4h7y_A 17 LSLLLKLEKNSVPLSD-ALLNKLIGRYSQAIEALP---PDK----YGQNESFARIQVRFAEL-KAIQEPDDARDYFQMAR 87 (161)
T ss_dssp HHHHHHHHHHTCSCCH-HHHHHHHHHHHHHHHHSC---GGG----GTTCHHHHHHHHHHHHH-HHHHCGGGCHHHHHHHH
T ss_pred HHHHHHHHHcCCCchh-hHHHHHHHHHHHHHHcCC---ccc----cccHHHHHHHHHHHHHH-HHhcCHHHHHHHHHHHH
Confidence 3334333334554433 444778899999998543 221 11223345567777744 67799999999999999
Q ss_pred HhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCH
Q 006908 475 DANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSE 515 (626)
Q Consensus 475 ~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~ 515 (626)
.+....+|.|...|+--...|+...|+..+.+|+.+.|...
T Consensus 88 ~~hKkFAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~~ 128 (161)
T 4h7y_A 88 ANCKKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPL 128 (161)
T ss_dssp HHCTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBCH
T ss_pred HHhHHHHHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCcH
Confidence 98777888888888888889999999999999999999864
No 300
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=94.86 E-value=0.18 Score=56.94 Aligned_cols=60 Identities=17% Similarity=0.147 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 006908 448 LLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMM 507 (626)
Q Consensus 448 ~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kA 507 (626)
.++.-.|.-++..++|+-|+..+.+|..+-|....+||+++.||..+|+|+.|+-.++-+
T Consensus 338 ~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 338 DLLNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 345556777778899999999999999999999999999999999999999999877765
No 301
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=94.56 E-value=0.26 Score=55.36 Aligned_cols=100 Identities=11% Similarity=-0.003 Sum_probs=53.9
Q ss_pred HHHHHHHHHHcC-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC--CHHHHHHHHHHHH
Q 006908 450 HLNVAACLLKLG-ECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKS--SEPDATAALSKLK 526 (626)
Q Consensus 450 ~~Nla~~~~kl~-~~~~A~~~~~~aL~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~--~~~~~~~~l~~l~ 526 (626)
|...|..-.+.+ +++.|...|.++|+..|++...+...+.....+|+.+.|+..|++|+...|+ ....+.......+
T Consensus 472 yi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~~~~w~~y~~fe~~~~~~~~AR~lferal~~~~~~~~~~~lw~~~~~fE 551 (679)
T 4e6h_A 472 YLENAYIEYHISKDTKTACKVLELGLKYFATDGEYINKYLDFLIYVNEESQVKSLFESSIDKISDSHLLKMIFQKVIFFE 551 (679)
T ss_dssp HHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHTTTSSSTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 333333333433 3666666777777666666666656666666667777777777777776653 1123333333333
Q ss_pred HHHHHHHHHHHHHHHccccCCCCC
Q 006908 527 KQRQEVESKARKQFKGLFDKKPGE 550 (626)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~~~~~~~ 550 (626)
..... ....++.++++....+.+
T Consensus 552 ~~~G~-~~~~~~v~~R~~~~~P~~ 574 (679)
T 4e6h_A 552 SKVGS-LNSVRTLEKRFFEKFPEV 574 (679)
T ss_dssp HHTCC-SHHHHHHHHHHHHHSTTC
T ss_pred HHcCC-HHHHHHHHHHHHHhCCCC
Confidence 32221 123455666666655543
No 302
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=94.38 E-value=0.16 Score=57.07 Aligned_cols=115 Identities=10% Similarity=-0.010 Sum_probs=75.8
Q ss_pred HHhhhchhhccccHHHHHHHHHHHHHhcccCC-------------C-CChhH-HHHHh------hhhhHHHHHHHHHHHH
Q 006908 401 IRVTGNRLFKEGKFELAKAKYEKVLRDFNHVN-------------P-QDDEE-GKVFV------GKRNLLHLNVAACLLK 459 (626)
Q Consensus 401 ~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~-------------p-~~~ee-~~~~~------~~~~~~~~Nla~~~~k 459 (626)
+...++...+.+..+.|...|.+|+..+.... . .+.+. ...+. .....++...+.....
T Consensus 437 Wi~y~~~erR~~~l~~AR~vf~~A~~~~~~~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~~~~w~~y~~fe~~ 516 (679)
T 4e6h_A 437 YCVYMNTMKRIQGLAASRKIFGKCRRLKKLVTPDIYLENAYIEYHISKDTKTACKVLELGLKYFATDGEYINKYLDFLIY 516 (679)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHTGGGSCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHh
Confidence 33444444566778889999999887422111 1 11111 11111 1122345556666777
Q ss_pred cCCHHHHHHHHHHHHHhCCC---CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCH
Q 006908 460 LGECRKSIEACNKVLDANPA---HVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSE 515 (626)
Q Consensus 460 l~~~~~A~~~~~~aL~~dp~---~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~ 515 (626)
.++...|...|++|+...|+ ....|-....--...|+.+.+.+.++++++..|++.
T Consensus 517 ~~~~~~AR~lferal~~~~~~~~~~~lw~~~~~fE~~~G~~~~~~~v~~R~~~~~P~~~ 575 (679)
T 4e6h_A 517 VNEESQVKSLFESSIDKISDSHLLKMIFQKVIFFESKVGSLNSVRTLEKRFFEKFPEVN 575 (679)
T ss_dssp HTCHHHHHHHHHHHTTTSSSTTHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHSTTCC
T ss_pred CCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCc
Confidence 89999999999999998873 334455555666678999999999999999999873
No 303
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=93.91 E-value=0.63 Score=41.89 Aligned_cols=67 Identities=15% Similarity=0.114 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH--hC---------------CCCHHHH-HHHHHHHHHcCCHHHHHHHHHHHHh
Q 006908 448 LLHLNVAACLLKLGECRKSIEACNKVLD--AN---------------PAHVKGL-YRRGMAYMALGEFEEAQRDFEMMMK 509 (626)
Q Consensus 448 ~~~~Nla~~~~kl~~~~~A~~~~~~aL~--~d---------------p~~~ka~-~~~g~a~~~lg~~~eA~~~~~kAl~ 509 (626)
+..+--+.||.++++|..|+.+.+.+|+ .+ |.+-.-+ ..+|..+..+|..++|+..|.+...
T Consensus 63 Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf~ 142 (242)
T 3kae_A 63 TSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDEEFFESLLGDLCTLSGYREEGIGHYVRSFG 142 (242)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccceeeeccchHHHHHHHHHHHHHHhcCHHHhhhHhhhhcC
Confidence 3444579999999999999999999993 22 3344443 3469999999999999999999999
Q ss_pred cCCCC
Q 006908 510 VDKSS 514 (626)
Q Consensus 510 l~P~~ 514 (626)
..|=.
T Consensus 143 ~~~lf 147 (242)
T 3kae_A 143 KSFLF 147 (242)
T ss_dssp HCCCH
T ss_pred Ccccc
Confidence 98864
No 304
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=93.82 E-value=0.34 Score=47.29 Aligned_cols=63 Identities=19% Similarity=0.166 Sum_probs=57.9
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHH
Q 006908 456 CLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDA 518 (626)
Q Consensus 456 ~~~kl~~~~~A~~~~~~aL~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~ 518 (626)
..++.+....|+..+...++-+|.|++....+-+.++-.|+|+.|.+-++.+.+++|...+.+
T Consensus 6 ~ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~a 68 (273)
T 1zbp_A 6 NALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGA 68 (273)
T ss_dssp HHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHH
T ss_pred HHHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhHHH
Confidence 457889999999999999999999999999999999999999999999999999999865433
No 305
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=93.70 E-value=0.17 Score=52.01 Aligned_cols=69 Identities=13% Similarity=0.084 Sum_probs=55.6
Q ss_pred hhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Q 006908 404 TGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKG 483 (626)
Q Consensus 404 ~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~~~ka 483 (626)
.|..++..|+++.|+..+++|+. ++|. ...|.-+|.++.-.|++++|++.+.+|+.++|... .
T Consensus 283 lal~~l~~gd~d~A~~~l~rAl~----Ln~s------------~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~-t 345 (372)
T 3ly7_A 283 KAVSALVKGKTDESYQAINTGID----LEMS------------WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGAN-T 345 (372)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHH----HCCC------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHH-H
T ss_pred HHHHHHhCCCHHHHHHHHHHHHh----cCCC------------HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcC-h
Confidence 55556678999999999999999 4432 34667789999999999999999999999999654 5
Q ss_pred HHHHHH
Q 006908 484 LYRRGM 489 (626)
Q Consensus 484 ~~~~g~ 489 (626)
|+...+
T Consensus 346 ~~~~~~ 351 (372)
T 3ly7_A 346 LYWIEN 351 (372)
T ss_dssp HHHHHH
T ss_pred HHHHhC
Confidence 554433
No 306
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=93.29 E-value=0.39 Score=50.05 Aligned_cols=99 Identities=16% Similarity=0.107 Sum_probs=79.2
Q ss_pred hhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC----C
Q 006908 403 VTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN----P 478 (626)
Q Consensus 403 ~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~d----p 478 (626)
..|..++..|+|.+|...+.+.+..+..+. + ..+...+|......|..++++.++...+.+|.... +
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~d--d-------~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~ 174 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKLD--D-------KNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYC 174 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSS--C-------THHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhccc--c-------chhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCC
Confidence 678899999999999999999999876542 1 23556788889999999999999999999987553 1
Q ss_pred -CCHHH--HHHHHHHHH-HcCCHHHHHHHHHHHHhc
Q 006908 479 -AHVKG--LYRRGMAYM-ALGEFEEAQRDFEMMMKV 510 (626)
Q Consensus 479 -~~~ka--~~~~g~a~~-~lg~~~eA~~~~~kAl~l 510 (626)
....| ..--|..|+ ..++|..|..+|-.|++-
T Consensus 175 ~p~i~a~i~~~~Gi~~l~~~rdyk~A~~~F~eaf~~ 210 (394)
T 3txn_A 175 PPKVQGALDLQSGILHAADERDFKTAFSYFYEAFEG 210 (394)
T ss_dssp CHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhhHHHHHhccCHHHHHHHHHHHHhc
Confidence 12234 444588899 899999999999998753
No 307
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=92.78 E-value=0.79 Score=45.80 Aligned_cols=113 Identities=14% Similarity=0.133 Sum_probs=72.2
Q ss_pred HHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHc--CCH-----HHHHHHHHHH
Q 006908 401 IRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKL--GEC-----RKSIEACNKV 473 (626)
Q Consensus 401 ~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl--~~~-----~~A~~~~~~a 473 (626)
..+.|-.+|..|+|.+|+..|+.+|..+.-+.-.+.+|....+++...|.--+-.+.+.+ ... +.....++-+
T Consensus 105 ~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icreYilal~iEl~Rr~l~~~~~~~~kR~lELA 184 (320)
T 3mkr_B 105 RLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMETERKKLPKETLEQQKRICEMA 184 (320)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHGGGCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhhheeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCchhHHHHHHHH
Confidence 457899999999999999999999998776666666666666665554433222222222 111 2222222222
Q ss_pred H-----HhCCCCH-HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC
Q 006908 474 L-----DANPAHV-KGLYRRGMAYMALGEFEEAQRDFEMMMKVDKS 513 (626)
Q Consensus 474 L-----~~dp~~~-ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~ 513 (626)
- .+.|.+. -++..--...++.++|--|....++.|++.|+
T Consensus 185 AYFT~c~Lqp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~ 230 (320)
T 3mkr_B 185 AYFTHSNLQPVHMILVLRTALNLFFKLKNFRTAAAFARRLLELGPK 230 (320)
T ss_dssp HHHTTSCCCHHHHHHHHHHHHHHHHHTTBHHHHHHHHHHHHHTCCC
T ss_pred HHhccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCC
Confidence 1 2233332 23434444677899999999999999999986
No 308
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=92.55 E-value=0.66 Score=49.89 Aligned_cols=80 Identities=9% Similarity=0.020 Sum_probs=70.2
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Q 006908 448 LLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKK 527 (626)
Q Consensus 448 ~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~ 527 (626)
.++.++|........+..|..+|.+|+.+.|.+..+|..+|......++.-+|+-+|-+++...... +.++.+|..+-.
T Consensus 153 r~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf-~~a~~nL~~~f~ 231 (497)
T 1ya0_A 153 HCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPF-PAASTNLQKALS 231 (497)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCC-HHHHHHHHHHHH
T ss_pred HHHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCC-hhHHHHHHHHHH
Confidence 4677888888888899999999999999999999999999999999999999999999999987666 567777766644
Q ss_pred H
Q 006908 528 Q 528 (626)
Q Consensus 528 ~ 528 (626)
+
T Consensus 232 ~ 232 (497)
T 1ya0_A 232 K 232 (497)
T ss_dssp H
T ss_pred H
Confidence 3
No 309
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=92.17 E-value=0.55 Score=46.96 Aligned_cols=115 Identities=15% Similarity=0.102 Sum_probs=70.5
Q ss_pred HHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcC-------CHHHHHHHHHH
Q 006908 400 KIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLG-------ECRKSIEACNK 472 (626)
Q Consensus 400 ~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~-------~~~~A~~~~~~ 472 (626)
...+.|-.+|..|+|.+|+..|+.+|..+.-+.-.+.+|.....++...|.--+-.+.+.+. +..+.++....
T Consensus 116 ~~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icrEYilal~iEl~Rr~l~~~~~kR~lELAAY 195 (325)
T 3mv2_A 116 EKMNEGYKNFKLNKPDIAIECFREAIYRITLLMVDDAEDEKLAHKILETAREYILGLSIELERRSLKEGNTVRMLELAAY 195 (325)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCCBCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHhheeeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHH
Confidence 34568999999999999999999999877655555555555555554444322222222221 11222221111
Q ss_pred H--HHhCCCCH-HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC
Q 006908 473 V--LDANPAHV-KGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSS 514 (626)
Q Consensus 473 a--L~~dp~~~-ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~ 514 (626)
- ..+.|.+. -++..--...++.++|--|....++.|++.|..
T Consensus 196 FT~c~LQp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~ 240 (325)
T 3mv2_A 196 FTKAKLSPIHRTNALQVAMSQHFKHKNFLQASYFAGEFLKIISSG 240 (325)
T ss_dssp GGGSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSS
T ss_pred hccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCH
Confidence 1 12233332 234444456778999999999999999999974
No 310
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=91.62 E-value=0.34 Score=51.24 Aligned_cols=99 Identities=15% Similarity=0.025 Sum_probs=77.1
Q ss_pred HHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC---
Q 006908 401 IRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN--- 477 (626)
Q Consensus 401 ~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~d--- 477 (626)
+...|..+++.|++..|++.|.++....... ..+..+++++..+++..++|..|...+.++..+-
T Consensus 134 ~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~------------~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~ 201 (429)
T 4b4t_R 134 WINLGEYYAQIGDKDNAEKTLGKSLSKAIST------------GAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKG 201 (429)
T ss_dssp CHHHHHHHHHHCCCTTHHHHHHHHHHHHTCC------------CSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhcCCh------------HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcC
Confidence 4478889999999999999999988754321 1245688889999999999999999999996552
Q ss_pred CCC-H--HHHHHHHHHHHHcCCHHHHHHHHHHHHhcC
Q 006908 478 PAH-V--KGLYRRGMAYMALGEFEEAQRDFEMMMKVD 511 (626)
Q Consensus 478 p~~-~--ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~ 511 (626)
++. . +.....|.+++..++|.+|...|..++.-.
T Consensus 202 ~d~~~~~~lk~~~gl~~l~~r~f~~Aa~~f~e~~~t~ 238 (429)
T 4b4t_R 202 GDWERRNRYKTYYGIHCLAVRNFKEAAKLLVDSLATF 238 (429)
T ss_dssp CCTHHHHHHHHHHHHGGGGTSCHHHHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHhccC
Confidence 221 2 334456778888999999999998877653
No 311
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=90.65 E-value=2.4 Score=41.36 Aligned_cols=64 Identities=17% Similarity=0.238 Sum_probs=53.4
Q ss_pred hchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Q 006908 405 GNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKG 483 (626)
Q Consensus 405 Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~~~ka 483 (626)
...+++.|+.+.|+......++ ..|.|. .+...+-..+.-.|+|++|...+..+.+++|.....
T Consensus 4 ~~~ll~~g~L~~al~~~~~~VR----~~P~da-----------~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~ 67 (273)
T 1zbp_A 4 WKNALSEGQLQQALELLIEAIK----ASPKDA-----------SLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPG 67 (273)
T ss_dssp HHHHTTTTCHHHHHHHHHHHHH----TCTTCH-----------HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHH
T ss_pred HHHHHhCCCHHHHHHHHHHHHH----hCCcCH-----------HHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhHH
Confidence 3567899999999999999999 788873 345556666677899999999999999999987654
No 312
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=88.70 E-value=4.9 Score=43.08 Aligned_cols=109 Identities=13% Similarity=-0.031 Sum_probs=76.1
Q ss_pred HHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHH----------HH---H----------------hhhhhHHH
Q 006908 400 KIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEG----------KV---F----------------VGKRNLLH 450 (626)
Q Consensus 400 ~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~----------~~---~----------------~~~~~~~~ 450 (626)
.+...+..+...|+.+.|...|.+|+.. |.+..-+ +. + ......+|
T Consensus 215 lW~~ya~~~~~~~~~~~ar~i~erAi~~-----P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lw 289 (493)
T 2uy1_A 215 VYFFYSEYLIGIGQKEKAKKVVERGIEM-----SDGMFLSLYYGLVMDEEAVYGDLKRKYSMGEAESAEKVFSKELDLLR 289 (493)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CCSSHHHHHHHHHTTCTHHHHHHHHHTC----------CHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhC-----CCcHHHHHHHHhhcchhHHHHHHHHHHHhhccchhhhhcccccHHHH
Confidence 3555666677889999999999999994 4332110 00 0 01112456
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC-CHHHHHHHHHHHHhcCCCC
Q 006908 451 LNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALG-EFEEAQRDFEMMMKVDKSS 514 (626)
Q Consensus 451 ~Nla~~~~kl~~~~~A~~~~~~aL~~dp~~~ka~~~~g~a~~~lg-~~~eA~~~~~kAl~l~P~~ 514 (626)
.+.+....+.+..+.|...+.+| ...+.....|...|..-..++ +++.|+..|+++++..|++
T Consensus 290 ~~y~~~~~r~~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~ 353 (493)
T 2uy1_A 290 INHLNYVLKKRGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDS 353 (493)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCC
Confidence 66777777788899999999999 433345566666666655556 6999999999999998886
No 313
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=88.13 E-value=0.72 Score=52.10 Aligned_cols=59 Identities=24% Similarity=0.297 Sum_probs=50.3
Q ss_pred HHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 006908 400 KIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKV 473 (626)
Q Consensus 400 ~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~a 473 (626)
.+..++..+..+|+|+.|+.+-++|+. +.|.+ ..+|..||.||.++++|+.|+-..+-+
T Consensus 339 LL~~Qa~FLl~K~~~elAL~~Ak~AV~----~aPse-----------F~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 339 LLNIQTNFLLNRGDYELALGVSNTSTE----LALDS-----------FESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH----HCSSC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHHhccCcHHHHHHHHHHHHh----cCchh-----------hHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 566778888899999999999999999 56655 568999999999999999998765544
No 314
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=87.50 E-value=0.62 Score=36.88 Aligned_cols=40 Identities=30% Similarity=0.280 Sum_probs=34.7
Q ss_pred Chhh-HHHHHHHHHhhhchhhccccHHHHHHHHHHHHHhcc
Q 006908 390 SFDG-IMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFN 429 (626)
Q Consensus 390 ~~~e-~~~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~ 429 (626)
+..+ .++.|..+..+|..+=+.|+|.+|+.+|..|+.+|.
T Consensus 2 ~~~~~~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~ 42 (83)
T 2v6y_A 2 SAQVMLEDMARKYAILAVKADKEGKVEDAITYYKKAIEVLS 42 (83)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 4444 678899999999999999999999999999999654
No 315
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=86.92 E-value=6.1 Score=42.42 Aligned_cols=98 Identities=9% Similarity=0.019 Sum_probs=74.5
Q ss_pred HhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCC
Q 006908 402 RVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN-PAH 480 (626)
Q Consensus 402 k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~d-p~~ 480 (626)
...-+.+.+.|++++|...|.+.... .+.|+ ...|+.+-.+|.+.|++++|...+.+..+.. .-+
T Consensus 109 n~lI~~~~~~g~~~~A~~l~~~M~~~--g~~Pd------------~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd 174 (501)
T 4g26_A 109 TNGARLAVAKDDPEMAFDMVKQMKAF--GIQPR------------LRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPE 174 (501)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHT--TCCCC------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHc--CCCCc------------cceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCC
Confidence 33445677889999999999887651 12332 3467777788889999999999999887653 226
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhc--CCC
Q 006908 481 VKGLYRRGMAYMALGEFEEAQRDFEMMMKV--DKS 513 (626)
Q Consensus 481 ~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l--~P~ 513 (626)
...|..+-.+|.+.|++++|.+.|++..+. .|+
T Consensus 175 ~~ty~~Li~~~~~~g~~d~A~~ll~~Mr~~g~~ps 209 (501)
T 4g26_A 175 EPELAALLKVSMDTKNADKVYKTLQRLRDLVRQVS 209 (501)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSSBC
T ss_pred HHHHHHHHHHHhhCCCHHHHHHHHHHHHHhCCCcC
Confidence 778888889999999999999999987654 565
No 316
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=85.40 E-value=11 Score=40.39 Aligned_cols=92 Identities=8% Similarity=0.052 Sum_probs=73.2
Q ss_pred hhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHH
Q 006908 408 LFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN-PAHVKGLYR 486 (626)
Q Consensus 408 ~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~d-p~~~ka~~~ 486 (626)
..+.+.++.|...|.+... ..+.|+ ...|+.+-.+|.+.|++++|+..+.+..... .-+...|..
T Consensus 80 ~~~~~~l~~A~~lf~~M~~--~G~~Pd------------~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~ 145 (501)
T 4g26_A 80 SSPNPGLSRGFDIFKQMIV--DKVVPN------------EATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGP 145 (501)
T ss_dssp SSCCHHHHHHHHHHHHHHH--TTCCCC------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHH
T ss_pred hhhcchHHHHHHHHHHHHH--hCCCCC------------HHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccceehH
Confidence 3456678889999988765 123343 3578888999999999999999999987753 237888888
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhc--CCC
Q 006908 487 RGMAYMALGEFEEAQRDFEMMMKV--DKS 513 (626)
Q Consensus 487 ~g~a~~~lg~~~eA~~~~~kAl~l--~P~ 513 (626)
+-.+|...|++++|.+.|+...+. .|+
T Consensus 146 lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd 174 (501)
T 4g26_A 146 ALFGFCRKGDADKAYEVDAHMVESEVVPE 174 (501)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHCCCHHHHHHHHHHHHhcCCCCC
Confidence 999999999999999999998775 455
No 317
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=85.19 E-value=9.7 Score=40.16 Aligned_cols=106 Identities=13% Similarity=0.090 Sum_probs=78.1
Q ss_pred HHHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 006908 396 DEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLD 475 (626)
Q Consensus 396 ~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~ 475 (626)
+.+......+..++..|+|.+|.........-.... .+ ...+..+++-....|+..++|.+|...+.++..
T Consensus 135 erarl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~--~~-------~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~ 205 (445)
T 4b4t_P 135 ERARVTKDLVEIKKEEGKIDEAADILCELQVETYGS--ME-------MSEKIQFILEQMELSILKGDYSQATVLSRKILK 205 (445)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSS--SC-------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhc--cc-------HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 355566678899999999999999998876432211 12 223456777788899999999999999998742
Q ss_pred ---hCCCC--HHH--HHHHHHHHHHcCCHHHHHHHHHHHHhc
Q 006908 476 ---ANPAH--VKG--LYRRGMAYMALGEFEEAQRDFEMMMKV 510 (626)
Q Consensus 476 ---~dp~~--~ka--~~~~g~a~~~lg~~~eA~~~~~kAl~l 510 (626)
-.+.. .++ +...|..+...++|.+|..+|..++..
T Consensus 206 ~~~~~~~~~~lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 206 KTFKNPKYESLKLEYYNLLVKISLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHHHSSCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred hhcccCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 12222 333 455688888999999999999988764
No 318
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=84.29 E-value=1.7 Score=36.85 Aligned_cols=43 Identities=23% Similarity=0.315 Sum_probs=36.5
Q ss_pred CCChh-hHHHHHHHHHhhhchhhccccHHHHHHHHHHHHHhccc
Q 006908 388 GLSFD-GIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNH 430 (626)
Q Consensus 388 ~~~~~-e~~~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~ 430 (626)
.|+.. ..++.|..+..+|..+=+.|+|.+|+.+|..|+.+|..
T Consensus 7 ~m~~~~~~l~kAi~lv~~Ave~D~ag~y~eAl~lY~~Aie~l~~ 50 (117)
T 2cpt_A 7 GMSSTSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLH 50 (117)
T ss_dssp CSCCCCHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred cCCccHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 35545 67889999999999999999999999999999996543
No 319
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=81.16 E-value=1.5 Score=34.61 Aligned_cols=38 Identities=24% Similarity=0.242 Sum_probs=34.0
Q ss_pred hhHHHHHHHHHhhhchhhccccHHHHHHHHHHHHHhcc
Q 006908 392 DGIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFN 429 (626)
Q Consensus 392 ~e~~~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~ 429 (626)
...++.|..+..+|..+=+.|+|.+|+.+|..|+..|.
T Consensus 13 ~~~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~ 50 (83)
T 2w2u_A 13 VMLEEMARKYAINAVKADKEGNAEEAITNYKKAIEVLA 50 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 45677899999999999999999999999999999654
No 320
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=80.52 E-value=1.8 Score=34.36 Aligned_cols=41 Identities=15% Similarity=0.112 Sum_probs=34.5
Q ss_pred CChhhHHHHHHHHHhhhchhhccccHHHHHHHHHHHHHhcc
Q 006908 389 LSFDGIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFN 429 (626)
Q Consensus 389 ~~~~e~~~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~ 429 (626)
|+....++.|..+..+|...=+.|+|++|+.+|..|+.+|.
T Consensus 4 m~~~~~l~~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~l~ 44 (85)
T 2v6x_A 4 MSTGDFLTKGIELVQKAIDLDTATQYEEAYTAYYNGLDYLM 44 (85)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 33345677888999999999999999999999999999654
No 321
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=79.80 E-value=3.5 Score=33.27 Aligned_cols=39 Identities=15% Similarity=0.117 Sum_probs=33.8
Q ss_pred hhHHHHHHHHHhhhchhhccccHHHHHHHHHHHHHhccc
Q 006908 392 DGIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNH 430 (626)
Q Consensus 392 ~e~~~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~ 430 (626)
...++.|..+..+|..+=+.|+|.+|+.+|..|+.+|..
T Consensus 9 ~~~l~~Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~l~~ 47 (93)
T 1wfd_A 9 DSDSTAAVAVLKRAVELDAESRYQQALVCYQEGIDMLLQ 47 (93)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 346778889999999999999999999999999997653
No 322
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=79.54 E-value=18 Score=38.50 Aligned_cols=108 Identities=10% Similarity=-0.009 Sum_probs=76.1
Q ss_pred HHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhCC
Q 006908 400 KIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLG-ECRKSIEACNKVLDANP 478 (626)
Q Consensus 400 ~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~-~~~~A~~~~~~aL~~dp 478 (626)
.+...+....+.+..+.|...|.+| . ..+.. ..+|...|..-+.++ +++.|...+..++...|
T Consensus 288 lw~~y~~~~~r~~~~~~AR~i~~~A-~----~~~~~-----------~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~ 351 (493)
T 2uy1_A 288 LRINHLNYVLKKRGLELFRKLFIEL-G----NEGVG-----------PHVFIYCAFIEYYATGSRATPYNIFSSGLLKHP 351 (493)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHH-T----TSCCC-----------HHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHh-h----CCCCC-----------hHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCC
Confidence 3444555555677899999999999 4 11111 235555566555555 69999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q 006908 479 AHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQ 528 (626)
Q Consensus 479 ~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~~ 528 (626)
+++..+...+.-...+|+.+.|+..|+++. .. ..+.......+..
T Consensus 352 ~~~~~~~~yid~e~~~~~~~~aR~l~er~~----k~-~~lw~~~~~fE~~ 396 (493)
T 2uy1_A 352 DSTLLKEEFFLFLLRIGDEENARALFKRLE----KT-SRMWDSMIEYEFM 396 (493)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHSC----CB-HHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHH----HH-HHHHHHHHHHHHH
Confidence 988877777777788999999999999983 22 3444444444433
No 323
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=77.92 E-value=6.6 Score=44.22 Aligned_cols=55 Identities=16% Similarity=0.120 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHH--------HhCCCCHHHHHHHHHHHHHcCCHHHHHH
Q 006908 448 LLHLNVAACLLKLGECRKSIEACNKVL--------DANPAHVKGLYRRGMAYMALGEFEEAQR 502 (626)
Q Consensus 448 ~~~~Nla~~~~kl~~~~~A~~~~~~aL--------~~dp~~~ka~~~~g~a~~~lg~~~eA~~ 502 (626)
..|.++|..+++.++++.|+.+|.++- .....+.+.+-+++......|++..|..
T Consensus 682 ~~W~~la~~al~~~~~~~A~~~y~~~~d~~~l~~l~~~~~~~~~~~~~~~~a~~~~~~~~A~~ 744 (814)
T 3mkq_A 682 MKWRALGDASLQRFNFKLAIEAFTNAHDLESLFLLHSSFNNKEGLVTLAKDAETTGKFNLAFN 744 (814)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred hHHHHHHHHHHHcCCHHHHHHHHHHccChhhhHHHHHHcCCHHHHHHHHHHHHHcCchHHHHH
Confidence 467788888888888888888888752 1113444544455544444444444443
No 324
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=77.50 E-value=12 Score=34.07 Aligned_cols=27 Identities=15% Similarity=0.128 Sum_probs=18.6
Q ss_pred HHHhhhchhhccccHHHHHHHHHHHHH
Q 006908 400 KIRVTGNRLFKEGKFELAKAKYEKVLR 426 (626)
Q Consensus 400 ~~k~~Gn~~f~~g~~~~A~~~y~~al~ 426 (626)
.++..|..+..+|++.-|.++|+++-.
T Consensus 36 ~Wk~Lg~~AL~~gn~~lAe~cy~~~~D 62 (177)
T 3mkq_B 36 TWERLIQEALAQGNASLAEMIYQTQHS 62 (177)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHhCC
Confidence 566777777777777777777766443
No 325
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=76.67 E-value=24 Score=36.44 Aligned_cols=132 Identities=13% Similarity=0.064 Sum_probs=85.6
Q ss_pred HHHHHhhhchhhccccHHHHHHHHHHHHHhcccC------------------CCCChhHH-HHH-------h-----hhh
Q 006908 398 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHV------------------NPQDDEEG-KVF-------V-----GKR 446 (626)
Q Consensus 398 a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~------------------~p~~~ee~-~~~-------~-----~~~ 446 (626)
=..+.+.|..+.++|++++-..+......++..+ .|...+.. +.+ . -++
T Consensus 19 e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~kak~~k~v~~l~~~~~~~~~~~~~~~~~~~~~~~~a~~~~r~flr 98 (394)
T 3txn_A 19 EQGILQQGELYKQEGKAKELADLIKVTRPFLSSISKAKAAKLVRSLVDMFLDMDAGTGIEVQLCKDCIEWAKQEKRTFLR 98 (394)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHTTTGGGGSCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456678888899999888777776543332211 23332211 110 0 112
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC----C--CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC---CCCHHH
Q 006908 447 NLLHLNVAACLLKLGECRKSIEACNKVLDANP----A--HVKGLYRRGMAYMALGEFEEAQRDFEMMMKVD---KSSEPD 517 (626)
Q Consensus 447 ~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp----~--~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~---P~~~~~ 517 (626)
..+-.++|..|+..|+|.+|+..+.+++..-. . -...+....+.|..++++..|.+.|.+|.... +.+ +.
T Consensus 99 ~~l~~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~-p~ 177 (394)
T 3txn_A 99 QSLEARLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCP-PK 177 (394)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCC-HH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCC-HH
Confidence 23445889999999999999999999886421 1 14567888999999999999999999997763 122 45
Q ss_pred HHHHHHHHHHHHH
Q 006908 518 ATAALSKLKKQRQ 530 (626)
Q Consensus 518 ~~~~l~~l~~~~~ 530 (626)
+...+..+.....
T Consensus 178 i~a~i~~~~Gi~~ 190 (394)
T 3txn_A 178 VQGALDLQSGILH 190 (394)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHH
Confidence 5555555444333
No 326
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=76.59 E-value=4 Score=46.03 Aligned_cols=19 Identities=21% Similarity=0.218 Sum_probs=13.7
Q ss_pred HHHHHcCCHHHHHHHHHHH
Q 006908 489 MAYMALGEFEEAQRDFEMM 507 (626)
Q Consensus 489 ~a~~~lg~~~eA~~~~~kA 507 (626)
.++..+|++++|++.|.+.
T Consensus 744 ~~~~~~g~~~~a~~~~~~~ 762 (814)
T 3mkq_A 744 NAYWIAGDIQGAKDLLIKS 762 (814)
T ss_dssp HHHHHHTCHHHHHHHHHHT
T ss_pred HHHHHcCCHHHHHHHHHHc
Confidence 3566688888888877654
No 327
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=76.23 E-value=7.2 Score=41.79 Aligned_cols=79 Identities=10% Similarity=-0.004 Sum_probs=67.3
Q ss_pred HHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 006908 400 KIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANPA 479 (626)
Q Consensus 400 ~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~ 479 (626)
.+...|...--+..+..|..+|.+|+. +.|.+ ...|+-+|..+.-.+++-.|+-+|.++|.....
T Consensus 154 ~l~~LGDL~RY~~~~~~A~~~Y~~A~~----~~P~~-----------G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~P 218 (497)
T 1ya0_A 154 CLVHLGDIARYRNQTSQAESYYRHAAQ----LVPSN-----------GQPYNQLAILASSKGDHLTTIFYYCRSIAVKFP 218 (497)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTB-----------SHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBC
T ss_pred HHHHcccHHHHHHHHHHHHHHHHHHHH----hCCCC-----------CchHHHHHHHHhcccccHHHHHHHHHHHhcCCC
Confidence 456678877777889999999999999 56665 458899999999999999999999999988777
Q ss_pred CHHHHHHHHHHHHH
Q 006908 480 HVKGLYRRGMAYMA 493 (626)
Q Consensus 480 ~~ka~~~~g~a~~~ 493 (626)
.+.|.-++...+..
T Consensus 219 f~~a~~nL~~~f~~ 232 (497)
T 1ya0_A 219 FPAASTNLQKALSK 232 (497)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred ChhHHHHHHHHHHH
Confidence 88888888887765
No 328
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=74.07 E-value=4.1 Score=32.30 Aligned_cols=34 Identities=15% Similarity=0.120 Sum_probs=29.2
Q ss_pred HHHHHHHhhhchhhccccHHHHHHHHHHHHHhcc
Q 006908 396 DEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFN 429 (626)
Q Consensus 396 ~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~ 429 (626)
..|..+..+|..+-+.|+|.+|+.+|..|+.+|-
T Consensus 14 ~~A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ll 47 (86)
T 4a5x_A 14 TAAATVLKRAVELDSESRYPQALVCYQEGIDLLL 47 (86)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 4567778888888999999999999999998754
No 329
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=73.88 E-value=3.4 Score=49.36 Aligned_cols=104 Identities=11% Similarity=-0.049 Sum_probs=73.6
Q ss_pred HhhhchhhccccHHHHHHHHHHHHHhcccCCCC--ChhHHHH------HhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 006908 402 RVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQ--DDEEGKV------FVGKRNLLHLNVAACLLKLGECRKSIEACNKV 473 (626)
Q Consensus 402 k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~--~~ee~~~------~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~a 473 (626)
.-+|..++..|++++|..+|.+|...+..-... ....... ........|+.+...+-+.+.++.+++.+..|
T Consensus 846 yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~lA 925 (1139)
T 4fhn_B 846 YLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLA 925 (1139)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 457888889999999999999986533211111 1111110 12234456788888888999999999999999
Q ss_pred HHhCCCC-H--H--HHHHHHHHHHHcCCHHHHHHHHH
Q 006908 474 LDANPAH-V--K--GLYRRGMAYMALGEFEEAQRDFE 505 (626)
Q Consensus 474 L~~dp~~-~--k--a~~~~g~a~~~lg~~~eA~~~~~ 505 (626)
|+..+.+ . + -|.++=+++..+++|++|...+.
T Consensus 926 i~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~ 962 (1139)
T 4fhn_B 926 DASKETDDEDLSIAITHETLKTACAAGKFDAAHVALM 962 (1139)
T ss_dssp HHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGGGHHHH
T ss_pred HHhccCCChhhHHHHHHHHHHHHHhhCCHHHHHHHHH
Confidence 9876433 2 2 57788899999999999987764
No 330
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=71.49 E-value=9.7 Score=39.97 Aligned_cols=93 Identities=22% Similarity=0.186 Sum_probs=53.6
Q ss_pred ChhhHHHHHHHHHhhhchh--hcccc-HHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHH
Q 006908 390 SFDGIMDEAEKIRVTGNRL--FKEGK-FELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKS 466 (626)
Q Consensus 390 ~~~e~~~~a~~~k~~Gn~~--f~~g~-~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A 466 (626)
+..++...|+.++.++... -+.-+ -.+|+.+|++|+.+|..+...++-+ ....++++|.- |+.|
T Consensus 421 sL~eKi~~AE~~~~k~e~~~n~~a~~yA~kAi~~Y~~Ai~~L~k~~~tdd~~-------~v~~~~~~ak~------yE~a 487 (526)
T 2wb7_A 421 SLQEKIDEAEQLLAKAKGMNNENAIEYAQGAIDEYKAAINDLQKAAQQDDYQ-------MFLNYLNAAKK------HEMA 487 (526)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHTTCCSHH-------HHHHHHHHHHH------HHHH
T ss_pred HHHHHHHHHHHHHHhhhccCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCHH-------HHHHHHHHhhh------hhhc
Confidence 3556667777777665221 11222 4679999999999888776443211 13345555543 3333
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Q 006908 467 IEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKV 510 (626)
Q Consensus 467 ~~~~~~aL~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l 510 (626)
=.++ ..|.-....|..++|..+-.+|-++
T Consensus 488 GDyy---------------~~AA~k~~yG~~eqAe~l~~~A~~~ 516 (526)
T 2wb7_A 488 GDYY---------------VNAARKALNGDLEQAKIDAEKAKEY 516 (526)
T ss_dssp HHHH---------------HHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cHHH---------------HHHHHHHhcCccHHHHHHHHHHHHH
Confidence 3333 3334455568888888777666554
No 331
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=70.84 E-value=7 Score=41.84 Aligned_cols=69 Identities=9% Similarity=0.071 Sum_probs=56.7
Q ss_pred hhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--CC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC
Q 006908 446 RNLLHLNVAACLLKLGECRKSIEACNKVLDANP--AH---VKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSS 514 (626)
Q Consensus 446 ~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp--~~---~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~ 514 (626)
.+++++-+-..|+..+.|..|....+++.-... .| +.-+|..|+.+.-.++|.+|.++|..|+...|.+
T Consensus 230 qa~l~nllLRnYL~~~~y~qA~~lvsk~~fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~ 303 (523)
T 4b4t_S 230 KAMLINLILRDFLNNGEVDSASDFISKLEYPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHN 303 (523)
T ss_dssp HHHHHHHHHHHHHHSSCSTTHHHHHHHHCSCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCS
T ss_pred hHHHHHHHHHHHHccCcHHHHHHHHhcCcCCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcc
Confidence 356777788899999999999999999852211 11 4567889999999999999999999999988754
No 332
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=68.60 E-value=31 Score=35.39 Aligned_cols=69 Identities=13% Similarity=0.048 Sum_probs=52.1
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCC--------C--C------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Q 006908 453 VAACLLKLGECRKSIEACNKVLDANP--------A--H------------VKGLYRRGMAYMALGEFEEAQRDFEMMMKV 510 (626)
Q Consensus 453 la~~~~kl~~~~~A~~~~~~aL~~dp--------~--~------------~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l 510 (626)
.|......++...|...+.+||.+.. . + ..++..++.++..+|++.+|+..+.+++..
T Consensus 121 ~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l~~~~~~ 200 (388)
T 2ff4_A 121 AGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELEALTFE 200 (388)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 34444557889999999999997741 1 1 245666888899999999999999999999
Q ss_pred CCCCHHHHHHHH
Q 006908 511 DKSSEPDATAAL 522 (626)
Q Consensus 511 ~P~~~~~~~~~l 522 (626)
+|-++ .++..|
T Consensus 201 ~P~~E-~~~~~l 211 (388)
T 2ff4_A 201 HPYRE-PLWTQL 211 (388)
T ss_dssp STTCH-HHHHHH
T ss_pred CCCCH-HHHHHH
Confidence 99874 344433
No 333
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=68.16 E-value=21 Score=39.26 Aligned_cols=54 Identities=15% Similarity=0.080 Sum_probs=44.6
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 006908 456 CLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMK 509 (626)
Q Consensus 456 ~~~kl~~~~~A~~~~~~aL~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~ 509 (626)
..++.++|..|...+.+.-.-.....++.|.+|+++..+|+.++|...|+++..
T Consensus 294 ~Alr~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~~a~~~~~~~a~ 347 (618)
T 1qsa_A 294 MALGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREAEAKEILHQLMQ 347 (618)
T ss_dssp HHHHHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHCCCHHHHHHHHHHccccccccHhHHHHHHHHHHHcCCHHHHHHHHHHHhc
Confidence 345779999999988775443335688999999999999999999999998765
No 334
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=66.25 E-value=13 Score=33.72 Aligned_cols=46 Identities=15% Similarity=0.143 Sum_probs=40.0
Q ss_pred HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 006908 458 LKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMM 508 (626)
Q Consensus 458 ~kl~~~~~A~~~~~~aL~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl 508 (626)
+.+|+++.|.+.+... ++...|-++|.+.+..|+++-|..+|+++-
T Consensus 16 L~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~ 61 (177)
T 3mkq_B 16 LEYGNLDAALDEAKKL-----NDSITWERLIQEALAQGNASLAEMIYQTQH 61 (177)
T ss_dssp HHTTCHHHHHHHHHHH-----CCHHHHHHHHHHHHHTTCHHHHHHHHHHTT
T ss_pred HhcCCHHHHHHHHHHh-----CCHHHHHHHHHHHHHcCChHHHHHHHHHhC
Confidence 5789999999988776 678889999999999999999999998764
No 335
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=65.41 E-value=5.8 Score=31.56 Aligned_cols=37 Identities=24% Similarity=0.304 Sum_probs=31.9
Q ss_pred hHHHHHHHHHhhhchhhccccHHHHHHHHHHHHHhcc
Q 006908 393 GIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFN 429 (626)
Q Consensus 393 e~~~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~ 429 (626)
.-+..|..+-.++..+.+.|+|++||.+..+|..+|.
T Consensus 10 spLn~AH~~~RrAe~ll~~gkydeAIech~kAa~yL~ 46 (97)
T 2crb_A 10 GPLNLAHQQSRRADRLLAAGKYEEAISCHRKATTYLS 46 (97)
T ss_dssp THHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred chhhhhhHhhhHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 3466788888999999999999999999999998543
No 336
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=65.34 E-value=34 Score=26.87 Aligned_cols=27 Identities=7% Similarity=0.192 Sum_probs=15.8
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhc
Q 006908 484 LYRRGMAYMALGEFEEAQRDFEMMMKV 510 (626)
Q Consensus 484 ~~~~g~a~~~lg~~~eA~~~~~kAl~l 510 (626)
+..+|.-.-..|+|++|+..|..|+++
T Consensus 19 lv~~Ave~D~~g~y~eAl~lY~~Aie~ 45 (86)
T 4a5x_A 19 VLKRAVELDSESRYPQALVCYQEGIDL 45 (86)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 334444455667777766666666543
No 337
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=63.87 E-value=17 Score=30.42 Aligned_cols=74 Identities=12% Similarity=0.027 Sum_probs=53.2
Q ss_pred hhHHHHHHHHHhhhchhhccccHHHHHHHHHHHHHhccc---CCC----CChhHHHHHhhhhhHHHHHHHHHHHHcCCHH
Q 006908 392 DGIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNH---VNP----QDDEEGKVFVGKRNLLHLNVAACLLKLGECR 464 (626)
Q Consensus 392 ~e~~~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~---~~p----~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~ 464 (626)
......|-.+.+.|-.+=..|+-+.|+.+|++++..|.. +.. ...+.|+....+......||..+.-+++...
T Consensus 16 k~~h~~AF~~Is~AL~~DE~g~k~~Al~lYk~GI~eLe~Gl~I~~~~~~~~g~~we~Ar~lq~KM~~nL~~v~~RL~~Le 95 (116)
T 2dl1_A 16 REAYKKAFLFVNKGLNTDELGQKEEAKNYYKQGIGHLLRGISISSKESEHTGPGWESARQMQQKMKETLQNVRTRLEILE 95 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSSCCCCTTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHHHHHhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566777777887777789999999999998876642 222 3356677777777888888888877776544
Q ss_pred H
Q 006908 465 K 465 (626)
Q Consensus 465 ~ 465 (626)
.
T Consensus 96 ~ 96 (116)
T 2dl1_A 96 K 96 (116)
T ss_dssp H
T ss_pred h
Confidence 3
No 338
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=63.24 E-value=24 Score=37.16 Aligned_cols=104 Identities=6% Similarity=-0.007 Sum_probs=67.2
Q ss_pred cccHHHHHHHHHHHHHhccc-CCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--------C--C
Q 006908 411 EGKFELAKAKYEKVLRDFNH-VNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN--------P--A 479 (626)
Q Consensus 411 ~g~~~~A~~~y~~al~~l~~-~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~d--------p--~ 479 (626)
....+.|.....++...+-. ..+...+.....+.-..-+.+++-.+|+++++...|...+..+-... | .
T Consensus 139 ~~~le~~a~~i~k~F~~cl~Dr~~~~~~s~p~kk~~~l~l~n~L~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q 218 (455)
T 3t5v_B 139 HQFLSHISSILSRLFNSIKPPRGNASSTNIPGKQRILLYLVNKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQ 218 (455)
T ss_dssp THHHHHHHHHHHHHHHHCCCC----CCSSCCHHHHHHHHHHHHHHHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHH
T ss_pred hhHHHHHHHHHHHHHHHhcccCCCcccccccccchhHHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccc
Confidence 44567788888877765332 22211110000112223345678899999999998887775442222 1 1
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc-CCCC
Q 006908 480 HVKGLYRRGMAYMALGEFEEAQRDFEMMMKV-DKSS 514 (626)
Q Consensus 480 ~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l-~P~~ 514 (626)
-+.-+|.+|+.++..++|.+|...|..|+.. .|.+
T Consensus 219 ~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 219 QIEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred eEeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCcc
Confidence 2567899999999999999999999999998 7653
No 339
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=63.10 E-value=27 Score=31.47 Aligned_cols=53 Identities=15% Similarity=0.321 Sum_probs=46.4
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 006908 451 LNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMM 508 (626)
Q Consensus 451 ~Nla~~~~kl~~~~~A~~~~~~aL~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl 508 (626)
+-++..++-.|+|.+|+-..... +.+.+.|..+.||..+.+|..|+..+++.+
T Consensus 37 lL~~I~LyyngEY~R~Lf~L~~l-----NT~Ts~YYk~LCy~klKdYkkA~~~le~il 89 (242)
T 3kae_A 37 MLMSIVLYLNGEYTRALFHLHKL-----NTCTSKYYESLCYKKKKDYKKAIKSLESIL 89 (242)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTC-----CBHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhhhhhhhhcchHhHHHHHHHhc-----chHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44678888899999988766543 789999999999999999999999999999
No 340
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=62.86 E-value=20 Score=31.66 Aligned_cols=71 Identities=14% Similarity=0.173 Sum_probs=53.6
Q ss_pred ccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 006908 410 KEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGM 489 (626)
Q Consensus 410 ~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~~~ka~~~~g~ 489 (626)
..++.++|...|+.|+.. + +-.+.+|...|.--.++|+...|...+.+|+.+.|. ++-++..|.
T Consensus 72 ei~D~d~aR~vy~~a~~~----h-----------KkFAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k-~~~~le~a~ 135 (161)
T 4h7y_A 72 AIQEPDDARDYFQMARAN----C-----------KKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGAV-PLEMLEIAL 135 (161)
T ss_dssp HHHCGGGCHHHHHHHHHH----C-----------TTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCB-CHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHH----h-----------HHHHHHHHHHHHHHHHcccHHHHHHHHHHHhccCCC-cHHHHHHHH
Confidence 337899999999999983 1 112678888999999999999999999999999875 344444455
Q ss_pred HHHHcCC
Q 006908 490 AYMALGE 496 (626)
Q Consensus 490 a~~~lg~ 496 (626)
..++.|.
T Consensus 136 ~nl~~~~ 142 (161)
T 4h7y_A 136 RNLNLQK 142 (161)
T ss_dssp HHHHTTC
T ss_pred HhhhcCC
Confidence 5444443
No 341
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=60.79 E-value=32 Score=29.86 Aligned_cols=62 Identities=23% Similarity=0.151 Sum_probs=40.5
Q ss_pred HHHHHHHHHH-cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC
Q 006908 450 HLNVAACLLK-LGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVD 511 (626)
Q Consensus 450 ~~Nla~~~~k-l~~~~~A~~~~~~aL~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~ 511 (626)
|.++|.-++- .+.-+.--..+...+.-++-++.-++.+|.||.++|+..+|-+.+++|.+-.
T Consensus 93 ~vd~ALd~lv~~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~kG 155 (172)
T 1wy6_A 93 HVNKALDILVIQGKRDKLEEIGREILKNNEVSASILVAIANALRRVGDERDATTLLIEACKKG 155 (172)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhccHhHHHHHHHHHhccCCCChHHHHHHHHHHHHhcchhhHHHHHHHHHHhh
Confidence 3444444333 2333332223333334445579999999999999999999999999998854
No 342
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=59.48 E-value=51 Score=38.42 Aligned_cols=101 Identities=10% Similarity=-0.063 Sum_probs=77.4
Q ss_pred HHHHhhhchhhccccHHHHHHHHHHHHHhc-ccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 006908 399 EKIRVTGNRLFKEGKFELAKAKYEKVLRDF-NHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 477 (626)
Q Consensus 399 ~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l-~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~d 477 (626)
..+...=+.+.+.|+.++|...|....+.. ..+.|+ ...|+-+-..|.+.|++++|...+.+..+..
T Consensus 128 ~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~Pd------------vvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G 195 (1134)
T 3spa_A 128 QRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLT------------LDMYNAVMLGWARQGAFKELVYVLFMVKDAG 195 (1134)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCC------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCC------------HhHHHHHHHHHHhCCCHHHHHHHHHHHHHcC
Confidence 345666778899999999999997754321 113333 4578888889999999999999999987643
Q ss_pred -CCCHHHHHHHHHHHHHcCC-HHHHHHHHHHHHhcC
Q 006908 478 -PAHVKGLYRRGMAYMALGE-FEEAQRDFEMMMKVD 511 (626)
Q Consensus 478 -p~~~ka~~~~g~a~~~lg~-~~eA~~~~~kAl~l~ 511 (626)
.-|.-.|.-+-.++.+.|+ .++|.+.|++.....
T Consensus 196 ~~PDvvTYntLI~glcK~G~~~e~A~~Ll~EM~~kG 231 (1134)
T 3spa_A 196 LTPDLLSYAAALQCMGRQDQDAGTIERCLEQMSQEG 231 (1134)
T ss_dssp CCCCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHT
T ss_pred CCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcC
Confidence 2377788888889999998 578999999887753
No 343
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=58.07 E-value=24 Score=27.78 Aligned_cols=31 Identities=26% Similarity=0.435 Sum_probs=28.7
Q ss_pred HHHHHHHhhhchhhccccHHHHHHHHHHHHH
Q 006908 396 DEAEKIRVTGNRLFKEGKFELAKAKYEKVLR 426 (626)
Q Consensus 396 ~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~ 426 (626)
..+..+...|..+|+.++|.+|..+|+++..
T Consensus 51 ~~~r~~i~eak~~y~~~ny~ea~~l~~k~~n 81 (106)
T 2vkj_A 51 KKARSLIAEGKDLFETANYGEALVFFEKALN 81 (106)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcchhHHHHHHHHHHc
Confidence 4688889999999999999999999999997
No 344
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=55.31 E-value=77 Score=25.19 Aligned_cols=22 Identities=32% Similarity=0.372 Sum_probs=10.2
Q ss_pred HHHHHHHHHcCCHHHHHHHHHH
Q 006908 485 YRRGMAYMALGEFEEAQRDFEM 506 (626)
Q Consensus 485 ~~~g~a~~~lg~~~eA~~~~~k 506 (626)
-|++.++...|+|++|+++.++
T Consensus 19 ~RrAe~ll~~gkydeAIech~k 40 (97)
T 2crb_A 19 SRRADRLLAAGKYEEAISCHRK 40 (97)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHH
T ss_pred hhHHHHHHhcCCHHHHHHHHHH
Confidence 3444445555555554444333
No 345
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=52.05 E-value=1.1e+02 Score=30.72 Aligned_cols=115 Identities=17% Similarity=0.167 Sum_probs=60.2
Q ss_pred ChhhHHHHHHHHHhhhchhhccccHHHHHHHH-HHHHHhcccCCCCChhHHH-----HHhh----hhhHHHHHHHHHHHH
Q 006908 390 SFDGIMDEAEKIRVTGNRLFKEGKFELAKAKY-EKVLRDFNHVNPQDDEEGK-----VFVG----KRNLLHLNVAACLLK 459 (626)
Q Consensus 390 ~~~e~~~~a~~~k~~Gn~~f~~g~~~~A~~~y-~~al~~l~~~~p~~~ee~~-----~~~~----~~~~~~~Nla~~~~k 459 (626)
++++.++.-+.++...+.+.++++|.+|+.+. .-|+..+..-.....-+-. .+.+ .......++..++..
T Consensus 27 ~y~~~YEAHQ~~RTi~~Ry~~~k~y~eAidLL~~GA~~ll~~~Q~~sg~DL~~llvevy~~~~~~~~~~~~~rL~~L~~~ 106 (336)
T 3lpz_A 27 QPEEQYEAAQETRLVAARYSKQGNWAAAVDILASVSQTLLRSGQGGSGGDLAVLLVDTFRQAGQRVDGASRGKLLGCLRL 106 (336)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHTT
T ss_pred CCccccHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHh
Confidence 34555778888899999999999999999974 4444433321000000000 0000 000112223333322
Q ss_pred cCC--------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHH
Q 006908 460 LGE--------CRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDF 504 (626)
Q Consensus 460 l~~--------~~~A~~~~~~aL~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~ 504 (626)
... ..+|+....+.=...-.++.-+..+|..|.+.++|.+|...|
T Consensus 107 ~~~~~p~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~ig~~~~~e~~~~~Ae~H~ 159 (336)
T 3lpz_A 107 FQPGEPVRKRFVKEMIDWSKKFGDYPAGDPELHHVVGTLYVEEGEFEAAEKHL 159 (336)
T ss_dssp SCTTCHHHHHHHHHHHHHHHHHSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CCCCCcHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHccCCHHHHHHHH
Confidence 221 112222222210111245777888899999988998888776
No 346
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=50.81 E-value=19 Score=37.67 Aligned_cols=63 Identities=10% Similarity=0.094 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC---CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Q 006908 448 LLHLNVAACLLKLGECRKSIEACNKVLDANP---AHVKGLYRRGMAYMALGEFEEAQRDFEMMMKV 510 (626)
Q Consensus 448 ~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp---~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l 510 (626)
.++..+|..|++.|++..|++.+.++..... .-...++..-+++...++|..|...+.+|..+
T Consensus 132 ~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~ 197 (429)
T 4b4t_R 132 QAWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSM 197 (429)
T ss_dssp SCCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 3677899999999999999999999987643 23678889999999999999999999999776
No 347
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=47.12 E-value=64 Score=30.35 Aligned_cols=70 Identities=16% Similarity=0.063 Sum_probs=49.7
Q ss_pred HHHHHhhhchh-----hccccHHHHHHHHHHHHHhccc-CCCCChhHHHHHhhhhhHHHHHHHHHHHH-cCCHHHHHHHH
Q 006908 398 AEKIRVTGNRL-----FKEGKFELAKAKYEKVLRDFNH-VNPQDDEEGKVFVGKRNLLHLNVAACLLK-LGECRKSIEAC 470 (626)
Q Consensus 398 a~~~k~~Gn~~-----f~~g~~~~A~~~y~~al~~l~~-~~p~~~ee~~~~~~~~~~~~~Nla~~~~k-l~~~~~A~~~~ 470 (626)
+--+|.+|..+ |..|+-+.|...|+.|...... +.| .++.+..+.+|.+..|+. +++.++|+..+
T Consensus 120 VFY~KMKGDYyRYlAE~~~g~~e~a~~aY~~A~~iA~~~L~p--------thPirLGLaLNfSVFyYEIln~p~~Ac~lA 191 (227)
T 2o8p_A 120 FFKLKVKSDISRYKLEFGLCSLEDSKKIHQDAFTLLCEHPDK--------IEQLPLGFIQNLAYILSEKYGEKKQVFNML 191 (227)
T ss_dssp HHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHCGGG--------GGGSCHHHHHHHHHHHHHTSSCHHHHHHHH
T ss_pred HHHHHHhhhHHHHHHHHccccHHHHHHHHHHHHHHHHhhCCC--------CChHHHHHHHHHHHHHHHHccCHHHHHHHH
Confidence 44455555432 4566688999999999986442 333 255667788888888775 78899999999
Q ss_pred HHHHH
Q 006908 471 NKVLD 475 (626)
Q Consensus 471 ~~aL~ 475 (626)
.+|+.
T Consensus 192 k~Afd 196 (227)
T 2o8p_A 192 NSLGK 196 (227)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98865
No 348
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=46.75 E-value=74 Score=28.20 Aligned_cols=68 Identities=16% Similarity=0.183 Sum_probs=45.2
Q ss_pred HHhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHH-HHHHHHHHHcCCHHHHHHHHHHHHH
Q 006908 401 IRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLH-LNVAACLLKLGECRKSIEACNKVLD 475 (626)
Q Consensus 401 ~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~-~Nla~~~~kl~~~~~A~~~~~~aL~ 475 (626)
-...|..+|+.|+|-+|-+.++.+-. ..+...++... +...+. +-.|..+++.|++..|...+.+++.
T Consensus 35 ~~~~~i~lFn~g~yfeaHEvLEe~W~----~~~~~~~er~~---lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~ 103 (161)
T 2ijq_A 35 AVVHGVRLYNSGEFHESHDCFEDEWY----NYGRGNTESKF---LHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQ 103 (161)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHTT----TTCSSSHHHHH---HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCchHHHHHHHHHHH----hcCCCchHHHH---HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 35678889999999999999987665 22222122221 223344 4456667777888888888888875
No 349
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=45.45 E-value=1.3e+02 Score=24.97 Aligned_cols=15 Identities=20% Similarity=0.239 Sum_probs=7.7
Q ss_pred HHHHHHHHHhcCCCC
Q 006908 500 AQRDFEMMMKVDKSS 514 (626)
Q Consensus 500 A~~~~~kAl~l~P~~ 514 (626)
|++.|..+++..+.+
T Consensus 44 Aie~l~~alk~e~~~ 58 (117)
T 2cpt_A 44 AVQYFLHVVKYEAQG 58 (117)
T ss_dssp HHHHHHHHHHTSCCC
T ss_pred HHHHHHHHHHhccCC
Confidence 334455555556554
No 350
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=43.93 E-value=31 Score=28.74 Aligned_cols=43 Identities=14% Similarity=0.143 Sum_probs=25.8
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCC
Q 006908 462 ECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDK 512 (626)
Q Consensus 462 ~~~~A~~~~~~aL~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P 512 (626)
.|.+|..+.++||.+|-. |.-...+.-|.+++..|.++|.+..
T Consensus 18 ~h~~AF~~Is~AL~~DE~--------g~k~~Al~lYk~GI~eLe~Gl~I~~ 60 (116)
T 2dl1_A 18 AYKKAFLFVNKGLNTDEL--------GQKEEAKNYYKQGIGHLLRGISISS 60 (116)
T ss_dssp HHHHHHHHHHHHHHHHHH--------TCHHHHHHHHHHHHHHHHHHHSSCC
T ss_pred HHHHHHHHHHHHhhhhhc--------CCHHHHHHHHHHHHHHHHHhccccc
Confidence 367788888888877641 3333333444455556667777644
No 351
>3r9m_A BRO1 domain-containing protein BROX; protein binding; 1.95A {Homo sapiens} PDB: 3um3_A 3zxp_A 3um2_A 3um1_A 3uly_A 3um0_A
Probab=42.08 E-value=1.1e+02 Score=31.16 Aligned_cols=111 Identities=12% Similarity=0.012 Sum_probs=0.0
Q ss_pred HHHHHHHHHhhhchhhccc------------cHHHHHHHHHHHHHhcccC-------------CCCChhHHHHHhhhhhH
Q 006908 394 IMDEAEKIRVTGNRLFKEG------------KFELAKAKYEKVLRDFNHV-------------NPQDDEEGKVFVGKRNL 448 (626)
Q Consensus 394 ~~~~a~~~k~~Gn~~f~~g------------~~~~A~~~y~~al~~l~~~-------------~p~~~ee~~~~~~~~~~ 448 (626)
.++.+.-+.+.|..+.+.+ ..+.|..+|++|..++..+ .+.| +......
T Consensus 110 ~fE~a~VLfNiaal~sq~A~~~~~~~r~~~e~lK~A~~~fq~AAG~f~~l~~~~~~~~~~~~~~~~D------ls~~~l~ 183 (376)
T 3r9m_A 110 VFELISMGFNVALWYTKYASRLAGKENITEDEAKEVHRSLKIAAGIFKHLKESHLPKLITPAEKGRD------LESRLIE 183 (376)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHHHHHTGGGCSSCCCTTST------TSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCcc------cCHHHHH
Q ss_pred HHHHHHHHHHHcCCHHHHHH-----------------HHHHHHHhCCCC--------------------HHHHHHHHHHH
Q 006908 449 LHLNVAACLLKLGECRKSIE-----------------ACNKVLDANPAH--------------------VKGLYRRGMAY 491 (626)
Q Consensus 449 ~~~Nla~~~~kl~~~~~A~~-----------------~~~~aL~~dp~~--------------------~ka~~~~g~a~ 491 (626)
++.+++.++-+.--|.+|+. .|.+|...-... +.|+|+.|..+
T Consensus 184 ~L~~l~LAQAQE~~~~Kai~~~~k~~liAKLa~q~~~~Y~~a~~~l~~~~~~i~~~W~~~v~~K~~~~~A~A~y~~a~~~ 263 (376)
T 3r9m_A 184 AYVIQCQAEAQEVTIARAIELKHAPGLIAALAYETANFYQKADHTLSSLEPAYSAKWRKYLHLKMCFYTAYAYCYHGETL 263 (376)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHcCCHHHHHHHHHHHHhc
Q 006908 492 MALGEFEEAQRDFEMMMKV 510 (626)
Q Consensus 492 ~~lg~~~eA~~~~~kAl~l 510 (626)
...+++-+|+..|+.|.+.
T Consensus 264 ~~~~k~GeaIa~L~~A~~~ 282 (376)
T 3r9m_A 264 LASDKCGEAIRSLQEAEKL 282 (376)
T ss_dssp HHTTCHHHHHHHHHHHHHH
T ss_pred HHcCChHHHHHHHHHHHHH
No 352
>2ymb_A MITD1, MIT domain-containing protein 1; protein transport, membrane, PLD; 3.40A {Homo sapiens}
Probab=40.51 E-value=5.9 Score=38.24 Aligned_cols=41 Identities=17% Similarity=0.114 Sum_probs=0.0
Q ss_pred hhhHHHHHHHHHhhhchhhccccHHHHHHHHHHHHHhcccC
Q 006908 391 FDGIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHV 431 (626)
Q Consensus 391 ~~e~~~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~ 431 (626)
-+..+..|..+..+|..+=+.|+|.+|+.+|..|+.+|...
T Consensus 16 ~dp~~~~Ai~lv~~AVe~D~~g~y~eAl~lY~eaIe~Ll~a 56 (257)
T 2ymb_A 16 QDPQSTAAATVLKRAVELDSESRYPQALVCYQEGIDLLLQV 56 (257)
T ss_dssp -----------------------------------------
T ss_pred CChhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 34456678888899999999999999999999999977543
No 353
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=39.72 E-value=30 Score=26.34 Aligned_cols=31 Identities=13% Similarity=0.135 Sum_probs=26.3
Q ss_pred HHHHHHhhhchhhccccHHHHHHHHHHHHHh
Q 006908 397 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRD 427 (626)
Q Consensus 397 ~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~ 427 (626)
--..-.+.|..+..+|++++|+.+|.+|+..
T Consensus 16 ~Fl~eV~~GE~L~~~g~~~~~~~hf~nAl~V 46 (73)
T 3ax2_A 16 FFLEEIQLGEELLAQGDYEKGVDHLTNAIAV 46 (73)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 3445567899999999999999999999994
No 354
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=39.38 E-value=1.3e+02 Score=23.25 Aligned_cols=12 Identities=0% Similarity=0.146 Sum_probs=5.9
Q ss_pred HHHHHHHhcCCC
Q 006908 502 RDFEMMMKVDKS 513 (626)
Q Consensus 502 ~~~~kAl~l~P~ 513 (626)
+.|..+++..|+
T Consensus 47 e~l~~alk~e~d 58 (83)
T 2w2u_A 47 EVLAQLVSLYRD 58 (83)
T ss_dssp HHHHHHHHHSTT
T ss_pred HHHHHHHHHCCC
Confidence 344445555554
No 355
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=39.13 E-value=73 Score=24.18 Aligned_cols=29 Identities=17% Similarity=0.307 Sum_probs=22.0
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhcCCCC
Q 006908 486 RRGMAYMALGEFEEAQRDFEMMMKVDKSS 514 (626)
Q Consensus 486 ~~g~a~~~lg~~~eA~~~~~kAl~l~P~~ 514 (626)
.+|..+...|++++|...|-+|+...|.-
T Consensus 22 ~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP 50 (73)
T 3ax2_A 22 QLGEELLAQGDYEKGVDHLTNAIAVCGQP 50 (73)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTCSSC
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHcCCH
Confidence 46777777788888888888888887764
No 356
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=38.67 E-value=61 Score=37.65 Aligned_cols=93 Identities=9% Similarity=-0.128 Sum_probs=54.0
Q ss_pred HhhhchhhccccHHHHHHHHHHHHHhcccCCCCC--hhHHHH------HhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 006908 402 RVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQD--DEEGKV------FVGKRNLLHLNVAACLLKLGECRKSIEACNKV 473 (626)
Q Consensus 402 k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~--~ee~~~------~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~a 473 (626)
.-+|..++..|++++|..+|++|-..+..-.... ..+... ........|+.++..+-+.+-|..++..+..|
T Consensus 844 yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e~~~~~~~YY~hV~~LFE~~~a~~~vi~fA~lA 923 (950)
T 4gq2_M 844 YLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLA 923 (950)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTTTCSHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcccccchhHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 3578889999999999999998764332111110 011000 11123346777777777777788888888887
Q ss_pred HHhC-CCCHH----HHHHHHHHHHHc
Q 006908 474 LDAN-PAHVK----GLYRRGMAYMAL 494 (626)
Q Consensus 474 L~~d-p~~~k----a~~~~g~a~~~l 494 (626)
|..- +++.. .|.|+=+++..+
T Consensus 924 I~~~~~dd~~l~~~l~~r~f~~a~a~ 949 (950)
T 4gq2_M 924 DASKETDDEDLSIAITHETLKTACAA 949 (950)
T ss_dssp HHTCCSCCHHHHHHHHHHHHHHHHHH
T ss_pred HhhcccCCccchHHHHHHHHHHHhhC
Confidence 7643 33322 444444444433
No 357
>3rau_A Tyrosine-protein phosphatase non-receptor type 23; BRO1 domain, hydrolase; 1.95A {Homo sapiens}
Probab=38.53 E-value=3.2e+02 Score=27.46 Aligned_cols=30 Identities=13% Similarity=0.089 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Q 006908 481 VKGLYRRGMAYMALGEFEEAQRDFEMMMKV 510 (626)
Q Consensus 481 ~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l 510 (626)
+.|+|+.|..+...+++-+|+..|+.|.+.
T Consensus 252 A~A~y~~a~~~~e~~k~GeaIa~L~~A~~~ 281 (363)
T 3rau_A 252 AVAHLHMGKQAEEQQKFGERVAYFQSALDK 281 (363)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHhhhHHHHHHHHHHHHHH
Confidence 457888888888889999999988877654
No 358
>2jpu_A ORF C02003 protein; solution structure, SSR10, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Sulfolobus solfataricus} PDB: 2q00_A
Probab=37.72 E-value=88 Score=26.60 Aligned_cols=32 Identities=22% Similarity=0.228 Sum_probs=28.1
Q ss_pred HHHHHHHHhhhchhhccccHHHHHHHHHHHHH
Q 006908 395 MDEAEKIRVTGNRLFKEGKFELAKAKYEKVLR 426 (626)
Q Consensus 395 ~~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~ 426 (626)
++.|..+.+.|..++.+|+.-+|.+.|-+|..
T Consensus 4 l~lAe~yL~EA~ell~kGD~vQAsEK~ykAae 35 (129)
T 2jpu_A 4 STSAEVYYEEAEEFLSKGDLVQACEKYYKAAE 35 (129)
T ss_dssp SCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 34688889999999999999999999988887
No 359
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=37.69 E-value=1.4e+02 Score=22.96 Aligned_cols=25 Identities=16% Similarity=0.380 Sum_probs=15.0
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHh
Q 006908 485 YRRGMAYMALGEFEEAQRDFEMMMK 509 (626)
Q Consensus 485 ~~~g~a~~~lg~~~eA~~~~~kAl~ 509 (626)
..+|+=|..+|+|+.|+.+|+.+++
T Consensus 16 ~k~ARe~Al~GnYdta~~yY~g~~~ 40 (78)
T 2rpa_A 16 VKLAREYALLGNYDSAMVYYQGVLD 40 (78)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcChHHHHHHHHHHHH
Confidence 3455556666666666666666554
No 360
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=37.30 E-value=3.1e+02 Score=26.97 Aligned_cols=111 Identities=12% Similarity=0.072 Sum_probs=56.6
Q ss_pred HHHHHHHHhhhchhhccccHHHHHHHH-HHHHHhcccCCCCChhHH-----HHHh----hhhhHHHHHHHHHHHHcCCHH
Q 006908 395 MDEAEKIRVTGNRLFKEGKFELAKAKY-EKVLRDFNHVNPQDDEEG-----KVFV----GKRNLLHLNVAACLLKLGECR 464 (626)
Q Consensus 395 ~~~a~~~k~~Gn~~f~~g~~~~A~~~y-~~al~~l~~~~p~~~ee~-----~~~~----~~~~~~~~Nla~~~~kl~~~~ 464 (626)
++.-+.++-..+++.++++|++|+... .-|+..+..-.....-+- +.+. +.......++..++.....-.
T Consensus 30 YEAhQ~~Rtl~~Ry~~~~~~~eAidlL~~ga~~ll~~~Q~~sa~DLa~llvev~~~~~~~~~~~~~~rl~~l~~~~p~~~ 109 (312)
T 2wpv_A 30 YEAHQTLRTIANRYVRSKSYEHAIELISQGALSFLKAKQGGSGTDLIFYLLEVYDLAEVKVDDISVARLVRLIAELDPSE 109 (312)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCSHHHHHHHHHHHTTCCTTC
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHCCCCC
Confidence 444567778889999999999999984 444443332100000000 0000 000011122222222211100
Q ss_pred -HHHHHHHHHHHh-------CCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 006908 465 -KSIEACNKVLDA-------NPAHVKGLYRRGMAYMALGEFEEAQRDFE 505 (626)
Q Consensus 465 -~A~~~~~~aL~~-------dp~~~ka~~~~g~a~~~lg~~~eA~~~~~ 505 (626)
.-....++|+.. .-.++.-|..+|..+..-+++.+|...|-
T Consensus 110 ~~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~~a~~~~~e~~~~~A~~H~i 158 (312)
T 2wpv_A 110 PNLKDVITGMNNWSIKFSEYKFGDPYLHNTIGSKLLEGDFVYEAERYFM 158 (312)
T ss_dssp TTHHHHHHHHHHHHHHTSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred chHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhcCCHHHHHHHHH
Confidence 112222333321 12467889999999999999999998774
No 361
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=37.03 E-value=42 Score=39.02 Aligned_cols=53 Identities=13% Similarity=0.164 Sum_probs=40.5
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 006908 453 VAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMK 509 (626)
Q Consensus 453 la~~~~kl~~~~~A~~~~~~aL~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~ 509 (626)
++..+++.+.++-| ...+...|.++-.-|-+|++|..+|++++|..+|++|-.
T Consensus 816 l~~~L~~~~~~~~a----~eL~~~~~~t~~~~yv~gr~~L~~ge~~~A~~~F~kAA~ 868 (950)
T 4gq2_M 816 LVEKLFLFKQYNAC----MQLIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTSL 868 (950)
T ss_dssp HHHHHHHTTCHHHH----HHHGGGCCSSHHHHHHHHHHHHHTTCHHHHHHHHHTCCC
T ss_pred HHHHHHHhcHHHHH----HHHHhhcCCChHHHHHHHHHHHHcCCHHHHHHHHHHHhh
Confidence 33444556666543 345567788888889999999999999999999999753
No 362
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=36.60 E-value=81 Score=30.35 Aligned_cols=53 Identities=23% Similarity=0.222 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHH-cCCHHHHHHHHHHHH
Q 006908 414 FELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLK-LGECRKSIEACNKVL 474 (626)
Q Consensus 414 ~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~k-l~~~~~A~~~~~~aL 474 (626)
-+.|...|+.|+.....+.|.+ +.+..+.+|.+..|+. +++.++|+..+.+|+
T Consensus 172 ~e~a~~aY~~A~~iA~~L~pth--------PirLGLaLNfSVFyYEiln~~~~Ac~lAk~Af 225 (260)
T 2npm_A 172 AEDALKAYKDATVVAKDLEPTH--------PIRLGLALNFSVFHYEILNEPRAAIDMAKEAF 225 (260)
T ss_dssp HHHHHHHHHHHHHHHTTSCTTC--------HHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCCC--------cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3578889999998664455544 4566778888888877 789999988888874
No 363
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=36.57 E-value=2.3e+02 Score=29.34 Aligned_cols=63 Identities=6% Similarity=0.051 Sum_probs=51.0
Q ss_pred hhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----CCCC--HHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 006908 446 RNLLHLNVAACLLKLGECRKSIEACNKVLDA----NPAH--VKGLYRRGMAYMALGEFEEAQRDFEMMM 508 (626)
Q Consensus 446 ~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~----dp~~--~ka~~~~g~a~~~lg~~~eA~~~~~kAl 508 (626)
++.+...+|..|...|+|.+|......+..- ++.. ...+....+.|...++|..|...++++.
T Consensus 136 rarl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~ 204 (445)
T 4b4t_P 136 RARVTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKIL 204 (445)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 4566778999999999999999999887532 2212 4567888999999999999999999974
No 364
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=35.92 E-value=1.5e+02 Score=22.86 Aligned_cols=15 Identities=13% Similarity=0.076 Sum_probs=7.4
Q ss_pred HHHHHHHHHhcCCCC
Q 006908 500 AQRDFEMMMKVDKSS 514 (626)
Q Consensus 500 A~~~~~kAl~l~P~~ 514 (626)
|++.|.++++..|+.
T Consensus 37 aie~l~~~lk~e~d~ 51 (83)
T 2v6y_A 37 AIEVLSQIIVLYPES 51 (83)
T ss_dssp HHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHCCCH
Confidence 334445555556653
No 365
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=35.32 E-value=62 Score=30.64 Aligned_cols=53 Identities=15% Similarity=0.107 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHhcc-cCCCCChhHHHHHhhhhhHHHHHHHHHHHH-cCCHHHHHHHHHHHH
Q 006908 414 FELAKAKYEKVLRDFN-HVNPQDDEEGKVFVGKRNLLHLNVAACLLK-LGECRKSIEACNKVL 474 (626)
Q Consensus 414 ~~~A~~~y~~al~~l~-~~~p~~~ee~~~~~~~~~~~~~Nla~~~~k-l~~~~~A~~~~~~aL 474 (626)
-+.|...|+.|+.... .+.|.+ +++..+.+|.+..|+. +++.++|+..+.+|+
T Consensus 146 ~e~a~~aY~~A~~iA~~~L~pth--------PirLgLaLN~SVF~yEil~~~~~A~~lAk~af 200 (234)
T 2br9_A 146 AENSLVAYKAASDIAMTELPPTH--------PIRLGLALNFSVFYYEILNSPDRACRLAKAAF 200 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTC--------HHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccCCCCC--------cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3578889999988654 355543 4566778888888776 788999988888774
No 366
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=34.95 E-value=87 Score=24.66 Aligned_cols=30 Identities=20% Similarity=0.328 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcC
Q 006908 482 KGLYRRGMAYMALGEFEEAQRDFEMMMKVD 511 (626)
Q Consensus 482 ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~ 511 (626)
..+...|.-++..++|.+|+..|+++..+-
T Consensus 54 r~~i~eak~~y~~~ny~ea~~l~~k~~n~t 83 (106)
T 2vkj_A 54 RSLIAEGKDLFETANYGEALVFFEKALNLS 83 (106)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcchhHHHHHHHHHHccc
Confidence 334445566677777777777777777653
No 367
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=34.90 E-value=50 Score=39.20 Aligned_cols=53 Identities=13% Similarity=0.214 Sum_probs=41.7
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 006908 452 NVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMM 508 (626)
Q Consensus 452 Nla~~~~kl~~~~~A~~~~~~aL~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl 508 (626)
.+..++++.+.++-|.. .+...|.++-.-|-+|+++...|++++|..+|++|-
T Consensus 817 ~l~~~l~~~~~~~~~~~----l~~~~~~~~~~~yl~g~~~L~~ge~~~A~~~F~kaa 869 (1139)
T 4fhn_B 817 ELVEKLFLFKQYNACMQ----LIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTS 869 (1139)
T ss_dssp HHHHHHHHHSCTTHHHH----HHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHTCC
T ss_pred HHHHHHHHhhhHHHHHH----HhhhccCCcHHHHHHHHHHHhcCCHHHHHHHHHHHh
Confidence 45555666777765543 455678888888999999999999999999999974
No 368
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=34.24 E-value=58 Score=26.12 Aligned_cols=39 Identities=10% Similarity=0.135 Sum_probs=30.9
Q ss_pred ChhhHHHHHHHHHhhhchhhccccHHHHHHHHHHHHHhc
Q 006908 390 SFDGIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDF 428 (626)
Q Consensus 390 ~~~e~~~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l 428 (626)
+.+++-..-..-.+.|..++.+|+++.|+.+|.+|+..+
T Consensus 12 d~e~~e~~Fl~eV~lGE~L~~~g~~e~av~Hf~nAl~Vc 50 (95)
T 1om2_A 12 DAEAVQKFFLEEIQLGEELLAQGDYEKGVDHLTNAIAVC 50 (95)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHc
Confidence 445554555666789999999999999999999999854
No 369
>2yin_A DOCK2, dedicator of cytokinesis protein 2; apoptosis, DOCK, DOCK guanine nucleotide exchange factors; 2.70A {Homo sapiens} PDB: 3b13_A
Probab=33.29 E-value=65 Score=33.65 Aligned_cols=95 Identities=5% Similarity=-0.016 Sum_probs=54.4
Q ss_pred HHHhhhchhhccccHHHHHHHHHHHHHhcccCCCCC--------hhH-HHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHH
Q 006908 400 KIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQD--------DEE-GKVFVGKRNLLHLNVAACLLKLGECRKSIEAC 470 (626)
Q Consensus 400 ~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~--------~ee-~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~ 470 (626)
-+...++.+.+.++|-+|..++......+.. .+.. ... .......+..++...+..+.+-+.|+.|+..|
T Consensus 37 ~l~~L~~~h~~~~ny~EAa~~l~lhA~l~~w-~~~~~~~~~~~~~~~~~qt~~~~ke~L~~~~i~~f~kg~~~E~ai~l~ 115 (436)
T 2yin_A 37 YLYKLRDLHLDCDNYTEAAYTLLLHTWLLKW-SDEQCASQVMQTGQQHPQTHRQLKETLYETIIGYFDKGKMWEEAISLC 115 (436)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTCCS-SCCC--------------CHHHHHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHHHCcCHHHHHHHHHHHHHHhCC-CccccCcccccCCCCccccHHHHHHHHHHHHHHHHHhcCcHHHHHHHH
Confidence 3456788899999999999998665554432 1111 000 00111233345666666666777889999988
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcC
Q 006908 471 NKVLDANPAHVKGLYRRGMAYMALG 495 (626)
Q Consensus 471 ~~aL~~dp~~~ka~~~~g~a~~~lg 495 (626)
..++..--.+..-|-.++.+|..+.
T Consensus 116 k~L~~~yE~~~~Dy~~Ls~~~~~~a 140 (436)
T 2yin_A 116 KELAEQYEMEIFDYELLSQNLIQQA 140 (436)
T ss_dssp HHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8887543222223444555555443
No 370
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=33.24 E-value=2.7e+02 Score=32.61 Aligned_cols=66 Identities=11% Similarity=-0.003 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh----CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc--CCC
Q 006908 448 LLHLNVAACLLKLGECRKSIEACNKVLDA----NPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKV--DKS 513 (626)
Q Consensus 448 ~~~~Nla~~~~kl~~~~~A~~~~~~aL~~----dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l--~P~ 513 (626)
..|+-+-.+|.+.|+.++|...+....+. -.-+.-.|.-+-.+|.+.|++++|++.|++..+. .|+
T Consensus 128 ~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PD 199 (1134)
T 3spa_A 128 QRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPD 199 (1134)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCc
Confidence 45677788899999999999999764432 2348889999999999999999999999998775 565
No 371
>1zb1_A BRO1 protein; AIP1, BRO1 domain, SNF7, trafficking, protein transport; 1.95A {Saccharomyces cerevisiae}
Probab=33.04 E-value=1.3e+02 Score=30.69 Aligned_cols=29 Identities=17% Similarity=0.184 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Q 006908 482 KGLYRRGMAYMALGEFEEAQRDFEMMMKV 510 (626)
Q Consensus 482 ka~~~~g~a~~~lg~~~eA~~~~~kAl~l 510 (626)
.|+|+.|..+...+++-+|+..|+.|.+.
T Consensus 258 ~A~y~~a~~~~e~~k~GeaIa~L~~A~~~ 286 (392)
T 1zb1_A 258 LSAYYHGLHLEEENRVGEAIAFLDFSMQQ 286 (392)
T ss_dssp HHHHHHHHHHHHTTCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccchHHHHHHHHHHHHH
Confidence 46777888888888888898888887653
No 372
>3lvg_A Clathrin heavy chain 1; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} PDB: 3lvh_A
Probab=32.26 E-value=0.12 Score=54.66 Aligned_cols=100 Identities=21% Similarity=0.319 Sum_probs=68.6
Q ss_pred HhhhchhhccccHHHHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q 006908 402 RVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANPAHV 481 (626)
Q Consensus 402 k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~~~ 481 (626)
..-|..+|..|.|+.|.-+|+..-. |..||.|+.++++|..|.+++.+| +|.
T Consensus 148 q~VGDrcf~e~lYeAAKilys~isN-----------------------~akLAstLV~L~~yq~AVdaArKA-----ns~ 199 (624)
T 3lvg_A 148 QQVGDRCYDEKMYDAAKLLYNNVSN-----------------------FGRLASTLVHLGEYQAAVDGARKA-----NST 199 (624)
T ss_dssp HHHHHHHHHSCCSTTSSTTGGGSCC-----------------------CTTTSSSSSSCSGGGSSTTTTTTC-----CSS
T ss_pred HHHHHHHHHccCHHHHHHHHHhCcc-----------------------HHHHHHHHHHHHHHHHHHHHHHhc-----CCh
Confidence 3578899999999988877763222 233788888999999988888877 555
Q ss_pred HHHHHHHHHHHH------------------------------cCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 006908 482 KGLYRRGMAYMA------------------------------LGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQ 530 (626)
Q Consensus 482 ka~~~~g~a~~~------------------------------lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~~~~ 530 (626)
+.|-....|+.. .|.|++-+..++.++.++-.+ -.+-.+|..+..+.+
T Consensus 200 ktWKeV~~ACvd~~EfrLAqicGLniIvhadeL~elv~~YE~~G~f~ELIsLlEaglglErAH-mGmFTELaILYsKY~ 277 (624)
T 3lvg_A 200 RTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAH-MGMFTELAILYSKFK 277 (624)
T ss_dssp CSHHHHTHHHHHSCTTTTTTHHHHHHHCCSSCCSGGGSSSSTTCCCTTSTTTHHHHTTSTTCC-HHHHHHHHHHHHSSC
T ss_pred hHHHHHHHHHhCchHHHHHHHhcchhcccHHHHHHHHHHHHhCCCHHHHHHHHHHHhCCCchh-HHHHHHHHHHHHhcC
Confidence 555554444444 455566677778888777665 346667777765554
No 373
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=32.26 E-value=1.4e+02 Score=32.90 Aligned_cols=44 Identities=25% Similarity=0.243 Sum_probs=22.7
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Q 006908 452 NVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALG 495 (626)
Q Consensus 452 Nla~~~~kl~~~~~A~~~~~~aL~~dp~~~ka~~~~g~a~~~lg 495 (626)
..|...+..|+|.-|.+.++.++..+|+|..|...++.+|.++|
T Consensus 454 ~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~ 497 (658)
T 2cfu_A 454 EQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLG 497 (658)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHH
Confidence 34444445555555555555555555555555555555554444
No 374
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=32.20 E-value=84 Score=28.91 Aligned_cols=53 Identities=13% Similarity=0.009 Sum_probs=38.2
Q ss_pred hhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH-----HHHHHHHcCCHH
Q 006908 446 RNLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYR-----RGMAYMALGEFE 498 (626)
Q Consensus 446 ~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~dp~~~ka~~~-----~g~a~~~lg~~~ 498 (626)
.+..++-+|..++-.++|.+|..++..|+...|.......+ +--+.+-+|++.
T Consensus 13 ~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~~~~k~~IL~yLIp~~Ll~G~iP 70 (203)
T 3t5x_A 13 RVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMP 70 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHcCCCC
Confidence 46677788999999999999999999999988866443322 223334567754
No 375
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=31.72 E-value=77 Score=30.23 Aligned_cols=52 Identities=15% Similarity=0.161 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHhcc-cCCCCChhHHHHHhhhhhHHHHHHHHHHHH-cCCHHHHHHHHHHH
Q 006908 414 FELAKAKYEKVLRDFN-HVNPQDDEEGKVFVGKRNLLHLNVAACLLK-LGECRKSIEACNKV 473 (626)
Q Consensus 414 ~~~A~~~y~~al~~l~-~~~p~~~ee~~~~~~~~~~~~~Nla~~~~k-l~~~~~A~~~~~~a 473 (626)
-+.|...|+.|..+.. .+.|.+ +++..+.+|.+..|+. +++.++|+..+.+|
T Consensus 147 ~~~a~~aY~~A~~iA~~~L~pth--------PirLGLaLNfSVFyYEIln~~~~Ac~lAk~A 200 (248)
T 3uzd_A 147 VESSEKAYSEAHEISKEHMQPTH--------PIRLGLALNYSVFYYEIQNAPEQACHLAKTA 200 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTC--------HHHHHHHHHHHHHHHHTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCC--------cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 3678888999987543 355543 4566778888877776 68888888877776
No 376
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=30.74 E-value=2e+02 Score=22.70 Aligned_cols=14 Identities=14% Similarity=0.031 Sum_probs=7.3
Q ss_pred HHHHHHHHHhcCCC
Q 006908 500 AQRDFEMMMKVDKS 513 (626)
Q Consensus 500 A~~~~~kAl~l~P~ 513 (626)
|++.|..+++..|+
T Consensus 41 Aie~l~~alk~e~~ 54 (93)
T 1wfd_A 41 GIDMLLQVLKGTKE 54 (93)
T ss_dssp HHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHCCC
Confidence 33445555555655
No 377
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=30.34 E-value=83 Score=30.28 Aligned_cols=53 Identities=15% Similarity=0.152 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHhcc-cCCCCChhHHHHHhhhhhHHHHHHHHHHHH-cCCHHHHHHHHHHHH
Q 006908 414 FELAKAKYEKVLRDFN-HVNPQDDEEGKVFVGKRNLLHLNVAACLLK-LGECRKSIEACNKVL 474 (626)
Q Consensus 414 ~~~A~~~y~~al~~l~-~~~p~~~ee~~~~~~~~~~~~~Nla~~~~k-l~~~~~A~~~~~~aL 474 (626)
-+.|...|+.|..+.. .+.|.+ +++..+.+|.+..|+. +++.++|+..+.+|+
T Consensus 151 ~e~a~~aY~~A~~iA~~~L~pth--------PirLGLaLNfSVFyYEiln~~~~Ac~lAk~Af 205 (260)
T 1o9d_A 151 AESTLTAYKAAQDIATTELAPTH--------PIRLGLALNFSVFYYEILNSPDRACNLAKQAF 205 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTC--------HHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCC--------cHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 3578889999988654 355544 4566778888888776 789999988888873
No 378
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=30.29 E-value=1.1e+02 Score=24.24 Aligned_cols=67 Identities=16% Similarity=0.116 Sum_probs=40.4
Q ss_pred HHHHHHHHHhhhchhhcc---ccHHHHHHHHHHHHHhccc---CCC-CChhHHHHHhhhhhHHHHHHHHHHHHc
Q 006908 394 IMDEAEKIRVTGNRLFKE---GKFELAKAKYEKVLRDFNH---VNP-QDDEEGKVFVGKRNLLHLNVAACLLKL 460 (626)
Q Consensus 394 ~~~~a~~~k~~Gn~~f~~---g~~~~A~~~y~~al~~l~~---~~p-~~~ee~~~~~~~~~~~~~Nla~~~~kl 460 (626)
-.+.|-.+.+.|-..=.. |+-++|+.+|++.+..|.. +.. ...+.++..+.+...-..||..+.-++
T Consensus 12 ~h~~AF~~Is~aL~~DE~~~~G~k~~A~~~YkkGi~eL~~Gi~V~~~g~G~~we~Ar~LQ~KM~~nL~~v~~RL 85 (89)
T 3eab_A 12 FHKQAFEYISIALRIDEDEKAGQKEQAVEWYKKGIEELEKGIAVIVTGQGEQCERARRLQAKMMTNLVMAKDRL 85 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHSCSSSGGGSHHHHHHHHHHHHHHHHSCCCCCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHhhcCCccCCCChhHHHHHHHHHHHHHHHHHHHHHH
Confidence 344556666666555555 7788888888887765432 111 234556666666666666776665443
No 379
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=30.20 E-value=85 Score=30.17 Aligned_cols=52 Identities=15% Similarity=0.124 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHhcc-cCCCCChhHHHHHhhhhhHHHHHHHHHHHH-cCCHHHHHHHHHHHH
Q 006908 415 ELAKAKYEKVLRDFN-HVNPQDDEEGKVFVGKRNLLHLNVAACLLK-LGECRKSIEACNKVL 474 (626)
Q Consensus 415 ~~A~~~y~~al~~l~-~~~p~~~ee~~~~~~~~~~~~~Nla~~~~k-l~~~~~A~~~~~~aL 474 (626)
+.|...|+.|..+.. .+.|.+ +++..+.+|.+..|+. +++.++|+..+.+|+
T Consensus 173 e~a~~aY~~A~~iA~~~L~pTh--------PirLGLaLNfSVFyYEIln~p~~Ac~LAk~AF 226 (261)
T 3ubw_A 173 ENSLVAYKAASDIAMTELPPTH--------PIRLGLALNFSVFYYEILNSPDRACRLAKAAF 226 (261)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTC--------HHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCC--------cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 567888999887542 355543 4566777888877776 688888888777763
No 380
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=30.06 E-value=71 Score=35.31 Aligned_cols=52 Identities=13% Similarity=0.070 Sum_probs=44.8
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 006908 479 AHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQE 531 (626)
Q Consensus 479 ~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~~~~~~~~~l~~l~~~~~~ 531 (626)
....+...+|+.++..|+|..|.+.++.++..+|+| ..++..++.+..++..
T Consensus 447 gg~~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~-~~a~~l~a~~~~~l~~ 498 (658)
T 2cfu_A 447 GGAERLLEQARASYARGEYRWVVEVVNRLVFAEPDN-RAARELQADALEQLGY 498 (658)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCc-HHHHHHHHHHHHHHHH
Confidence 577888899999999999999999999999999998 6788888776665554
No 381
>3c3r_A Programmed cell death 6-interacting protein; ALIX BRO1 CHMP4C amphipathic-helix, apoptosis, HOST-virus interaction, protein transport, transport; 2.02A {Homo sapiens} PDB: 2oew_A 3c3o_A 3c3q_A
Probab=28.30 E-value=2.7e+02 Score=28.24 Aligned_cols=30 Identities=10% Similarity=0.179 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Q 006908 481 VKGLYRRGMAYMALGEFEEAQRDFEMMMKV 510 (626)
Q Consensus 481 ~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l 510 (626)
+.|+|+.|..+...+++-+|+..|+.|.+.
T Consensus 275 A~A~y~~a~~~~e~~k~GeaIa~L~~A~~~ 304 (380)
T 3c3r_A 275 ANAEYHQSILAKQQKKFGEEIARLQHAAEL 304 (380)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHH
Confidence 346788888888899999999999888764
No 382
>2xs1_A Programmed cell death 6-interacting protein; protein transport-viral protein complex, cell cycle; 2.30A {Homo sapiens} PDB: 2xs8_A 2oev_A 2r05_A 2r02_A 2r03_A 2oex_A 2ojq_A
Probab=27.63 E-value=2.6e+02 Score=31.02 Aligned_cols=30 Identities=10% Similarity=0.103 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Q 006908 481 VKGLYRRGMAYMALGEFEEAQRDFEMMMKV 510 (626)
Q Consensus 481 ~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l 510 (626)
+.|+|+.|..+...+++-+|+..|+.|...
T Consensus 260 A~A~y~~a~~~~e~~k~GeaIa~L~~A~~~ 289 (704)
T 2xs1_A 260 ANAEYHQSILAKQQYYFGEEIARLQHAAEL 289 (704)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHhHHHHHHHHHHHHHHH
Confidence 346788888888889999999999888753
No 383
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=27.49 E-value=1.2e+02 Score=31.70 Aligned_cols=30 Identities=13% Similarity=0.220 Sum_probs=24.9
Q ss_pred hhHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 006908 446 RNLLHLNVAACLLKLGECRKSIEACNKVLD 475 (626)
Q Consensus 446 ~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~ 475 (626)
+..++.-+|.+|+-+++|.+|+..|..+|.
T Consensus 189 k~aa~allarvyL~~~~~~~A~~~a~~vi~ 218 (454)
T 3myv_A 189 KYAARALLARIYLYHDDNRKAFDLADQLIK 218 (454)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccHHHHHHHHHHHHh
Confidence 445677788899999999999999999885
No 384
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=26.93 E-value=1.3e+02 Score=27.53 Aligned_cols=29 Identities=17% Similarity=0.211 Sum_probs=13.7
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCC
Q 006908 484 LYRRGMAYMALGEFEEAQRDFEMMMKVDK 512 (626)
Q Consensus 484 ~~~~g~a~~~lg~~~eA~~~~~kAl~l~P 512 (626)
+|.+|+.++..++|.+|..+|..|+...|
T Consensus 17 ~YYlGr~~~~~~~y~~A~~~L~~A~~~~~ 45 (203)
T 3t5x_A 17 KYYVGRKAMFDSDFKQAEEYLSFAFEHCH 45 (203)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHCC
Confidence 34444444444444444444444444444
No 385
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=26.89 E-value=2.5e+02 Score=24.75 Aligned_cols=58 Identities=14% Similarity=0.157 Sum_probs=43.6
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHH-HHHHHH--HcCCHHHHHHHHHHHHhc
Q 006908 453 VAACLLKLGECRKSIEACNKVLDANPAH------VKGLYR-RGMAYM--ALGEFEEAQRDFEMMMKV 510 (626)
Q Consensus 453 la~~~~kl~~~~~A~~~~~~aL~~dp~~------~ka~~~-~g~a~~--~lg~~~eA~~~~~kAl~l 510 (626)
.+..++..++|-+|=+.++.+-...+.. .+++.+ +|.++. ..|+..-|...|.+|+..
T Consensus 38 ~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~~ 104 (161)
T 2ijq_A 38 HGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQY 104 (161)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 4666677799999988888887665544 456666 655554 469999999999999873
No 386
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=26.84 E-value=3.3e+02 Score=28.67 Aligned_cols=90 Identities=11% Similarity=0.063 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhcccCCCCChhHHHHHhhhhhHHHHHHHHHHHHcCCH----------------------------HHHH
Q 006908 416 LAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGEC----------------------------RKSI 467 (626)
Q Consensus 416 ~A~~~y~~al~~l~~~~p~~~ee~~~~~~~~~~~~~Nla~~~~kl~~~----------------------------~~A~ 467 (626)
.+|.....+|..++.... .......+.+.+++-||.+|+.|-+. +..+
T Consensus 82 ~~I~~~N~~i~~~~~~~~----~~~~~~~~~aea~flRA~~yf~L~~~~G~VP~~~~~~~~~~~~~~~r~~~~ev~~~I~ 157 (517)
T 3qnk_A 82 VKVRKCNRFFERIGTSTI----EESEKSRLTGEVHFLRAMFYFEMVKRYGGVILLDKVLTMEDNWEIPRSSEKECYDFIL 157 (517)
T ss_dssp HHHHHHHHHHHHGGGCCS----CHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCCCSSCCCTTSCCCCCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhcCCC----CHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeCCcCCccccccCCCCCHHHHHHHHH
Q ss_pred HHHHHHHHhCCCC-----------HHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 006908 468 EACNKVLDANPAH-----------VKGLYRRGMAYMALGEFEEAQRDFEMMMK 509 (626)
Q Consensus 468 ~~~~~aL~~dp~~-----------~ka~~~~g~a~~~lg~~~eA~~~~~kAl~ 509 (626)
.++..|+..-|.. .-|+-.+|++|+..++|++|.+.+++++.
T Consensus 158 ~dL~~A~~~Lp~~~~~~~~gr~tk~aA~allarv~L~~~~~~~A~~~a~~vi~ 210 (517)
T 3qnk_A 158 EDLKKATEMLPASYGSREKGRATKGAAYALKSRVELYDKRYEDVIKSCAEVYK 210 (517)
T ss_dssp HHHHHHHHHSCSCCCSTTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCccccCCcccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 387
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=26.60 E-value=96 Score=29.35 Aligned_cols=53 Identities=15% Similarity=0.226 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHhcc-cCCCCChhHHHHHhhhhhHHHHHHHHHHHH-cCCHHHHHHHHHHHH
Q 006908 414 FELAKAKYEKVLRDFN-HVNPQDDEEGKVFVGKRNLLHLNVAACLLK-LGECRKSIEACNKVL 474 (626)
Q Consensus 414 ~~~A~~~y~~al~~l~-~~~p~~~ee~~~~~~~~~~~~~Nla~~~~k-l~~~~~A~~~~~~aL 474 (626)
-+.|...|+.|..+.. .+.|.+ +++..+.+|.+..|+. +++.++|+..+.+|+
T Consensus 149 ~e~a~~aY~~A~~iA~~~L~pth--------PirLGLaLNfSVFyyEiln~~~~Ac~lAk~Af 203 (236)
T 3iqu_A 149 IDSARSAYQEAMDISKKEMPPTN--------PIRLGLALNFSVFHYEIANSPEEAISLAKTTF 203 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTC--------HHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCC--------cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 4678889999987543 355543 4566778888887774 688999988888774
No 388
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=25.70 E-value=1.2e+02 Score=31.58 Aligned_cols=30 Identities=13% Similarity=0.170 Sum_probs=25.4
Q ss_pred hhHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 006908 446 RNLLHLNVAACLLKLGECRKSIEACNKVLD 475 (626)
Q Consensus 446 ~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~ 475 (626)
+..++.-+|.+|+-+++|.+|+..|..+|.
T Consensus 195 k~aa~allArvyL~~~~~~~A~~~a~~vi~ 224 (461)
T 3kez_A 195 RWAAMTLLSRVYLYKGEYNEALTMAENAIK 224 (461)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 455677789999999999999999999985
No 389
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=25.68 E-value=58 Score=28.38 Aligned_cols=46 Identities=20% Similarity=0.161 Sum_probs=39.1
Q ss_pred CCChhhHHHHHHHHHhhhchhhccccHHHHHHHHHHHHHhcccCCC
Q 006908 388 GLSFDGIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNP 433 (626)
Q Consensus 388 ~~~~~e~~~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~~p 433 (626)
..++...+..|..+..+|..+...|+++.|.-.|-+++.++-...|
T Consensus 30 ~i~l~~ylrta~~llr~A~~y~~egd~e~AYily~R~~~L~~e~Ip 75 (146)
T 2xze_A 30 DIPPRRYFRSGVEIIRMASIYSEEGNIEHAFILYNKYITLFIEKLP 75 (146)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTGG
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHcc
Confidence 4577888999999999999999999999999999998876643333
No 390
>2rkl_A Vacuolar protein sorting-associated protein VTA1; dimerization motif, cytoplasm, endosome, lipid transport, membrane, protein transport; 1.50A {Saccharomyces cerevisiae} PDB: 3mhv_A
Probab=25.43 E-value=61 Score=22.90 Aligned_cols=40 Identities=15% Similarity=0.139 Sum_probs=33.4
Q ss_pred ChhhHHHHHHHHHhhhchhhccccHHHHHHHHHHHHHhcc
Q 006908 390 SFDGIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFN 429 (626)
Q Consensus 390 ~~~e~~~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~ 429 (626)
+..+.+..|+++...+.....=.+...|++..++||++|.
T Consensus 12 ~~~~~i~~AqK~aK~AiSAL~feDv~tA~~~L~~AL~lL~ 51 (53)
T 2rkl_A 12 DRASKIEQIQKLAKYAISALNYEDLPTAKDELTKALDLLN 51 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHh
Confidence 3456678888999999988888999999999999998653
No 391
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=25.10 E-value=60 Score=36.98 Aligned_cols=64 Identities=20% Similarity=0.212 Sum_probs=45.1
Q ss_pred CCCCeEEEEEEEEEecCCCcEEEeeccC------------------------CCCCCEEEEcCCCcchhhHHHHhhcCCC
Q 006908 287 LHDSLLCVHYKGMLLNEEKKVFYDTRVD------------------------NDGQPLEFSSGEGLVPEGFEMCVRLMLP 342 (626)
Q Consensus 287 ~~~~~V~v~y~~~~~~~~g~~~~dt~~~------------------------~~~~p~~f~lG~~~v~~gle~~l~~M~~ 342 (626)
.+|+.|.|.|+..|..+++..-++.+.+ ....-++|.+|.+.+.+-++.++..|..
T Consensus 562 ~~gs~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ies~~e~~fe~g~g~~~~~le~vV~qms~ 641 (950)
T 3htx_A 562 TNGSVVSICYSLSLAVDPEYSSDGESPREDNESNEEMESEYSANCESSVEPIESNEEIEFEVGTGSMNPHIESEVTQMTV 641 (950)
T ss_dssp CTTEEEEEEEEEEEEECC----------------------------CCCEEEEEEEEEEEEETTTCBCHHHHHHHTTCCT
T ss_pred CCCcEEEEEEEEEEEecCcccccccccccccccccccccccccchhhhhhcccccHHHHHHHhcCCccchhhheeeeccc
Confidence 4799999999999875332221100000 0123578999999999999999999999
Q ss_pred CCEEEEEe
Q 006908 343 GEIALVTC 350 (626)
Q Consensus 343 GE~~~~~i 350 (626)
|+...|..
T Consensus 642 gqT~~F~~ 649 (950)
T 3htx_A 642 GEYASFKM 649 (950)
T ss_dssp TCEEEEEE
T ss_pred cceeEEec
Confidence 99998884
No 392
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=24.30 E-value=1.1e+02 Score=24.46 Aligned_cols=27 Identities=19% Similarity=0.306 Sum_probs=13.8
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhcCCC
Q 006908 487 RGMAYMALGEFEEAQRDFEMMMKVDKS 513 (626)
Q Consensus 487 ~g~a~~~lg~~~eA~~~~~kAl~l~P~ 513 (626)
+|..+...|+++.|+..|-+|+.+.|.
T Consensus 26 lGE~L~~~g~~e~av~Hf~nAl~Vc~q 52 (95)
T 1om2_A 26 LGEELLAQGDYEKGVDHLTNAIAVCGQ 52 (95)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHcCC
Confidence 444455555555555555555555443
No 393
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=23.98 E-value=2.4e+02 Score=21.54 Aligned_cols=17 Identities=18% Similarity=0.247 Sum_probs=8.1
Q ss_pred HcCCHHHHHHHHHHHHh
Q 006908 493 ALGEFEEAQRDFEMMMK 509 (626)
Q Consensus 493 ~lg~~~eA~~~~~kAl~ 509 (626)
..|+|++|+..|..|++
T Consensus 25 ~~g~y~eAl~~Y~~aie 41 (85)
T 2v6x_A 25 TATQYEEAYTAYYNGLD 41 (85)
T ss_dssp HTTCHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHH
Confidence 34555555554444443
No 394
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=23.90 E-value=1.3e+02 Score=31.59 Aligned_cols=31 Identities=19% Similarity=0.291 Sum_probs=26.0
Q ss_pred hhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 006908 446 RNLLHLNVAACLLKLGECRKSIEACNKVLDA 476 (626)
Q Consensus 446 ~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~ 476 (626)
+..++.-+|.+|+-+++|.+|+..|..+|..
T Consensus 201 k~aa~allarvyL~~~~~~~A~~~a~~vi~~ 231 (477)
T 3mcx_A 201 YWAAQALLSRVYLNMGEYQKAYDAATDVIKN 231 (477)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhC
Confidence 4456777899999999999999999999864
No 395
>4abx_A DNA repair protein RECN; DNA binding protein, ATP binding protein, double break repair, coiled-coil; HET: DNA; 2.04A {Deinococcus radiodurans}
Probab=22.55 E-value=2.9e+02 Score=24.39 Aligned_cols=48 Identities=13% Similarity=0.021 Sum_probs=34.3
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC
Q 006908 466 SIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKS 513 (626)
Q Consensus 466 A~~~~~~aL~~dp~~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~l~P~ 513 (626)
|...+..+..++|......-++..++..+.+....+..|...+..||.
T Consensus 75 a~~~L~~l~~~d~~l~~~~e~l~~a~~~l~d~~~~L~~y~~~le~DP~ 122 (175)
T 4abx_A 75 AVRALNAGAKYDETVMQLQNELRAALESVQAIAGELRDVAEGSAADPE 122 (175)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHH
T ss_pred HHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHH
Confidence 444445555567766667777888888888888788777777777775
No 396
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A
Probab=22.30 E-value=19 Score=37.90 Aligned_cols=39 Identities=23% Similarity=0.305 Sum_probs=0.0
Q ss_pred hHHHHHHHHHhhhchhhccccHHHHHHHHHHHHHhcccC
Q 006908 393 GIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHV 431 (626)
Q Consensus 393 e~~~~a~~~k~~Gn~~f~~g~~~~A~~~y~~al~~l~~~ 431 (626)
+.++.|..+..+|..+-+.|+|++|+.+|..|+.+|...
T Consensus 6 ~~~~~A~~~~~~Av~~D~~g~~~eA~~~Y~~a~~~l~~~ 44 (444)
T 2zan_A 6 TNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHV 44 (444)
T ss_dssp ---------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 456778888899999999999999999999999987643
No 397
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=21.75 E-value=1e+02 Score=29.77 Aligned_cols=54 Identities=19% Similarity=0.175 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHhcc-cC--CCCChhHHHHHhhhhhHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Q 006908 414 FELAKAKYEKVLRDFN-HV--NPQDDEEGKVFVGKRNLLHLNVAACLLK-LGECRKSIEACNKVLD 475 (626)
Q Consensus 414 ~~~A~~~y~~al~~l~-~~--~p~~~ee~~~~~~~~~~~~~Nla~~~~k-l~~~~~A~~~~~~aL~ 475 (626)
-+.|...|+.|..+.. .+ .|. ++++..+.+|.+..|+. +++.++|+..+.+|+.
T Consensus 168 ~e~a~~aYq~A~eiA~~~L~~~pT--------hPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFd 225 (268)
T 3efz_A 168 IKQAVEFYEDALQRERSFLEKYPS--------DPLYLATILNYTILKYDLLGNPEGAMKFANRAIQ 225 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTGGG--------CHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCC--------ChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 4567788888877542 23 333 44566677888877774 6788888887777753
No 398
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=20.82 E-value=1.8e+02 Score=30.18 Aligned_cols=47 Identities=11% Similarity=0.015 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHhCCC--------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 006908 463 CRKSIEACNKVLDANPA--------HVKGLYRRGMAYMALGEFEEAQRDFEMMMK 509 (626)
Q Consensus 463 ~~~A~~~~~~aL~~dp~--------~~ka~~~~g~a~~~lg~~~eA~~~~~kAl~ 509 (626)
|+..+.+++.|+.+-|. -.-|+-.+|++|+..++|++|++..++++.
T Consensus 164 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~ 218 (454)
T 3myv_A 164 YDFIIETLEEAVTLMSEEKNNGRMNKYAARALLARIYLYHDDNRKAFDLADQLIK 218 (454)
T ss_dssp HHHHHHHHHHHHHHCCCSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccccccCCeecHHHHHHHHHHHHHhcccHHHHHHHHHHHHh
Confidence 45677777777776543 245788899999999999999999888875
No 399
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=20.47 E-value=1.8e+02 Score=30.76 Aligned_cols=31 Identities=13% Similarity=0.091 Sum_probs=24.2
Q ss_pred hhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 006908 446 RNLLHLNVAACLLKLGECRKSIEACNKVLDA 476 (626)
Q Consensus 446 ~~~~~~Nla~~~~kl~~~~~A~~~~~~aL~~ 476 (626)
+..++.-+|.+|+-+++|.+|+..|.+++..
T Consensus 202 k~aA~allArvyL~~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 202 NEVVLGILSRACLYARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 3456667888888888888888888888754
No 400
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=20.27 E-value=88 Score=24.05 Aligned_cols=27 Identities=22% Similarity=0.246 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 006908 449 LHLNVAACLLKLGECRKSIEACNKVLD 475 (626)
Q Consensus 449 ~~~Nla~~~~kl~~~~~A~~~~~~aL~ 475 (626)
-...+|.=|..+|+|+.|+.+|+.+++
T Consensus 14 e~~k~ARe~Al~GnYdta~~yY~g~~~ 40 (78)
T 2rpa_A 14 ENVKLAREYALLGNYDSAMVYYQGVLD 40 (78)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcChHHHHHHHHHHHH
Confidence 356688889999999999999998874
Done!