BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006910
(626 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8L612|MACP1_ARATH MACPF domain-containing protein At1g14780 OS=Arabidopsis thaliana
GN=At1g14780 PE=2 SV=1
Length = 627
Score = 723 bits (1867), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/616 (59%), Positives = 448/616 (72%), Gaps = 31/616 (5%)
Query: 35 VVERAISSLGKGFDLTSDFRLKYCK------GKERLVVLNDADHEREITVPGFGSVNEVS 88
V+E A+ SLGKGFDLT+DFRLKYCK G +RLVVL D RE+ +PGFG VS
Sbjct: 8 VIETAVKSLGKGFDLTADFRLKYCKDGDGSAGDDRLVVL-DQTQNRELHIPGFGVFQNVS 66
Query: 89 IDIKCDKGDRTRYQSDILNFNQMSEFFNQNSAIPGKIPSGLFNNMFNFHSGSWAKDAGNT 148
DI CDKG+RTR++SDIL+FN+MSE+FNQ S++ GKIPSG FN F F SGSWA DA N
Sbjct: 67 ADINCDKGERTRFRSDILDFNKMSEYFNQRSSVTGKIPSGNFNATFGFQSGSWATDAANV 126
Query: 149 KYLGLDGYYIILFNVHI-DRYPLVLSDEVRNAVPSSWDPFALARFIEKYGTHIIVGLSIG 207
K LGLD + LFN+HI + L L+D VRNAVPSSWDP LARFIE+YGTH+I G+S+G
Sbjct: 127 KSLGLDASVVTLFNLHIHNPNRLRLTDRVRNAVPSSWDPQLLARFIERYGTHVITGVSVG 186
Query: 208 GQDVVLVNQDNSSNLGPSELKKHLDDLGDQLFTGTC-------NFTPNIKEQKNKPPQAF 260
GQDVV+V QD SS+L L+ HL DLGDQLFTG+C N + + K P+AF
Sbjct: 187 GQDVVVVRQDKSSDLDNDLLRHHLYDLGDQLFTGSCLLSTRRLNKAYHHSHSQPKFPEAF 246
Query: 261 KVFD-PTPAAVNSFSSTSSKDGISVICSRRGGDPSAYSHCEWLLTVPSNPDAVHFNFIPI 319
VFD A N+FS +S++GI+VIC++RGGD A SH EWL+TVP PDA++FNFIPI
Sbjct: 247 NVFDDKQTVAFNNFS-INSQNGITVICAKRGGDGRAKSHSEWLITVPDKPDAINFNFIPI 305
Query: 320 TSLLKGVPGKGFLSHAINLYLRYKPPITDLQYFLEFQAHKVWAPIHNDLPLGPTTNMTNP 379
TSLLK VPG G LSHA++LYLRYKPP+ DLQYFL+F + WAP+HNDLP G NM +
Sbjct: 306 TSLLKDVPGSGLLSHAMSLYLRYKPPLMDLQYFLDFSGPRAWAPVHNDLPFGAAPNMASA 365
Query: 380 SPALHFHLMGPKLYVNTMQVTTEKIPVTGVRLYLEGRKCNRLAVHLQHLSITPTMLDSKI 439
PALH + MGPKLYVNT VT+EK PVTG+R +LEG+KCNRLA+HLQHL T T + KI
Sbjct: 366 YPALHINFMGPKLYVNTTPVTSEKNPVTGMRFFLEGKKCNRLAIHLQHLDNTRTTVGEKI 425
Query: 440 DTDTQLWRGSDVTDDNHQYFEAIGGKYFSHICTAPVKYDPKW-------ATRKDVSFIVT 492
TD +WRGSD DN +YFE + GK FSH+CT PVKYDP W ++ DV+FIVT
Sbjct: 426 -TDEHIWRGSDQITDNDRYFEPLNGKKFSHVCTVPVKYDPNWIKTTSNHKSQNDVAFIVT 484
Query: 493 GAQLHVQKHESKSILHLRLLFSKVSHAFIVQSSWAQSSSEFSQKSGFFSAISAP-NSG-- 549
GAQL V+KH SKS+LHLRL ++KVS ++VQ+SW SQKSG FS++S P SG
Sbjct: 485 GAQLEVKKHGSKSVLHLRLRYTKVSDHYVVQNSWVHGPIGTSQKSGIFSSMSMPLTSGSV 544
Query: 550 --NQEKEKKPVVIVDSSVFPTGPPVPVRTQKLLKFVDTSQLCRGPQDSPGHWLVTGAKLD 607
N ++ K V++DS VFP GPPVP K++KFVD SQLCRGPQ SPGHWLVTG +L
Sbjct: 545 HHNMIQKDKNEVVLDSGVFPGGPPVPA-NNKIVKFVDLSQLCRGPQHSPGHWLVTGVRLY 603
Query: 608 LEKGKICLRVKFSLLN 623
L+KGK+CL VKF+LL+
Sbjct: 604 LDKGKLCLHVKFALLH 619
>sp|Q9STW5|MACP2_ARATH MACPF domain-containing protein At4g24290 OS=Arabidopsis thaliana
GN=At4g24290 PE=2 SV=1
Length = 606
Score = 528 bits (1360), Expect = e-149, Method: Compositional matrix adjust.
Identities = 287/603 (47%), Positives = 385/603 (63%), Gaps = 34/603 (5%)
Query: 35 VVERAISSLGKGFDLTSDFRLKYCKG---KERLVVLNDADHEREITVPGFGSVNEVSIDI 91
E AI S+G G+DL D RLKYCKG RL+ + + D EI +PG S+ VS I
Sbjct: 10 AAEVAIGSIGCGYDLAIDLRLKYCKGGSKDSRLLDIKEGDDNCEIVLPGGISIPNVSKSI 69
Query: 92 KCDKGDRTRYQSDILNFNQMSEFFNQNSAIPGKIPSGLFNNMFNFHSGSWAKDAGNTKYL 151
KCDKG+R R++SDIL F QM+E FNQ ++ GKIPSGLFN MF F S W KDA TK L
Sbjct: 70 KCDKGERMRFRSDILPFQQMAEQFNQELSLAGKIPSGLFNAMFEF-SSCWQKDAAYTKNL 128
Query: 152 GLDGYYIILFNVHIDRYPLVLSDEVRNAVPSSWDPFALARFIEKYGTHIIVGLSIGGQDV 211
DG +I L++V +D+ ++L + V+ AVPS+WDP ALARFI+ YGTHIIV + +GG+DV
Sbjct: 129 AFDGVFISLYSVALDKSQVLLREHVKQAVPSTWDPAALARFIDIYGTHIIVSVKMGGKDV 188
Query: 212 VLVNQDNSSNLGPSELKKHLDDLGDQLF--------TGTCNFTPNIKEQKNKPPQAFKVF 263
+ Q +SS L P +L+K L ++ D+ F TG+ + K + + F
Sbjct: 189 IYAKQQHSSKLQPEDLQKRLKEVADKRFVEASVVHNTGSERVQASSKVETKEQRLRF--- 245
Query: 264 DPTPAAVNSFSSTSSKDGISVICSRRGG-DPSAYSHCEWLLTVPSNPDAVHFNFIPITSL 322
A +S S ++K+ +C RRGG D H EWL TV PD + +FIPITSL
Sbjct: 246 ----ADTSSLGSYANKEDYVFMCKRRGGNDNRNLMHNEWLQTVQMEPDVISMSFIPITSL 301
Query: 323 LKGVPGKGFLSHAINLYLRYKPPITDLQYFLEFQAHKVWAPIHNDLPLGPTTNMTNPSPA 382
L GVPG GFLSHAINLYLRYKPPI +L FLEFQ + WAP+ ++LPLGP + +
Sbjct: 302 LNGVPGSGFLSHAINLYLRYKPPIEELHQFLEFQLPRQWAPVFSELPLGPQRKQQS-CAS 360
Query: 383 LHFHLMGPKLYVNTMQVTTEKIPVTGVRLYLEGRKCNRLAVHLQHLSITPTMLDSKIDTD 442
L F GPKLYVNT V K P+TG+RLYLEGR+ NRLA+HLQHLS P + + D +
Sbjct: 361 LQFSFFGPKLYVNTTPVDVGKRPITGMRLYLEGRRSNRLAIHLQHLSSLPKIYQLEDDLN 420
Query: 443 TQLWRGSDVTDDNHQYFEAIGGKYFSHICTAPVKYDPKWATRKDVSFIVTGAQLHVQKHE 502
+ + S + +Y+E + K +SH+CT PV+ D D+S +VTGAQLHV+ H
Sbjct: 421 RSIRQES----HDRRYYEKVNWKNYSHVCTEPVESD------DDLS-VVTGAQLHVESHG 469
Query: 503 SKSILHLRLLFSKVSHAFIVQSSWAQSSSEFSQKSGFFSA-ISAPNSGNQEKEKKPV-VI 560
K++L LRL FS+V A +V++S + F+ KSG S IS + Q+ +P V
Sbjct: 470 FKNVLFLRLCFSRVVGATLVKNSEWDEAVGFAPKSGLISTLISHHFTAAQKPPPRPADVN 529
Query: 561 VDSSVFPTGPPVPVRTQKLLKFVDTSQLCRGPQDSPGHWLVTGAKLDLEKGKICLRVKFS 620
++S+++P GPPVP + KLLKFVDTS++ RGPQ+SPG+W+V+GA+L +EKGKI L+VK+S
Sbjct: 530 INSAIYPGGPPVPTQAPKLLKFVDTSEMTRGPQESPGYWVVSGARLLVEKGKISLKVKYS 589
Query: 621 LLN 623
L
Sbjct: 590 LFT 592
>sp|Q9SGN6|NSL1_ARATH MACPF domain-containing protein NSL1 OS=Arabidopsis thaliana
GN=NSL1 PE=1 SV=1
Length = 612
Score = 480 bits (1235), Expect = e-134, Method: Compositional matrix adjust.
Identities = 280/622 (45%), Positives = 371/622 (59%), Gaps = 58/622 (9%)
Query: 35 VVERAISSLGKGFDLTSDFRLKYCKGK---ERLVVLNDADHEREITVPGFGSVNEVSIDI 91
E+A+S +G G+DL SD R CK RLV + D R++ PG VN VS I
Sbjct: 14 AAEKAVSVIGLGYDLCSDVRFSACKTTPDGSRLVEI-DPTRNRDLIFPGGIVVNNVSSSI 72
Query: 92 KCDKGDRTRYQSDILNFNQMSEFFNQNSAIPGKIPSGLFNNMFNFHSGSWAKDAGNTKYL 151
KCDKG+RTR +SDIL+FNQMSE FNQ+ + GKIPSG+FNNMF F S W KDA + K L
Sbjct: 73 KCDKGERTRLRSDILSFNQMSEKFNQDMCLSGKIPSGMFNNMFAF-SKCWPKDASSVKTL 131
Query: 152 GLDGYYIILFNVHIDRYPLVLSDEVRNAVPSSWDPFALARFIEKYGTHIIVGLSIGGQDV 211
DG++I L++V I R L L DEV+ VPSSWD ALA FIEKYGTH++VG+++GG+DV
Sbjct: 132 AYDGWFISLYSVEIVRKQLTLRDEVKREVPSSWDSAALAGFIEKYGTHVVVGVTMGGKDV 191
Query: 212 VLVNQDNSSNLGPSELKKHLDDLGDQLFTGTCNFTPNIKEQKNKPPQAFKVFDPTPAAVN 271
+ V Q SN P E++K L GD+ F + ++K P + V+ P N
Sbjct: 192 IHVKQMRKSNHEPEEIQKMLKHWGDERFC--------VDPVESKSPAS--VYSGKPKEEN 241
Query: 272 -----------SFSST----SSKDGISVICSRRGGDPSAYSHCEWLLTVPSNPDAVHFNF 316
S SS + + I +C RRGG SH WL TV P+ + F
Sbjct: 242 LLQWGLQPFGTSVSSAVVMHTKNEEIMRVCIRRGGVDLGQSHERWLSTVSQAPNVISMCF 301
Query: 317 IPITSLLKGVPGKGFLSHAINLYLRYKPPITDLQYFLEFQAHKVWAPIHNDLPLGPTTNM 376
+PITSLL G+PG GFLSHA+NLYLRYKPPI +L FLEFQ + WAP++ DLPLG
Sbjct: 302 VPITSLLSGLPGTGFLSHAVNLYLRYKPPIEELHQFLEFQLPRQWAPVYGDLPLG-LRRS 360
Query: 377 TNPSPALHFHLMGPKLYVNTMQVTTEKIPVTGVRLYLEGRKCNRLAVHLQHLSITPTML- 435
SP+L F LMGPKLYVNT +V + + PVTG+R +LEG+K N LA+HLQHLS P L
Sbjct: 361 KQSSPSLQFSLMGPKLYVNTSKVDSGERPVTGLRFFLEGKKGNHLAIHLQHLSACPPSLH 420
Query: 436 ----DSKIDTDTQLWRGSDVTDDNHQYFEAIGGKYFSHICTAPVKYDPKWATRKDVSFIV 491
D+ + + +G Y+ + FSH+CT PV+Y+ A D + IV
Sbjct: 421 LSHDDTYEPIEEPVEKG---------YYVPVKWGIFSHVCTYPVQYNG--ARSDDTASIV 469
Query: 492 TGAQLHVQKHESKSILHLRLLFSKVSHAFIVQSSWAQSSSEFSQKSGFFSAIS------- 544
T A L V+ + +L LRL FS + A +S W S+ S+KSG FS IS
Sbjct: 470 TKAWLEVKGMGMRKVLFLRLGFSLDASAVTRKSCWDNLSTN-SRKSGVFSMISTRLSTGL 528
Query: 545 APNSGNQEKEKKPVVIVDSSVFPTGPPVPVRTQKLLKFVDTSQLCRGPQDSPGHWLVTGA 604
+PN + + K + ++S+V+P GP PV+ KLL VDT ++ RGP++ PG+W+VTGA
Sbjct: 529 SPNPATTKPQSK--IDINSAVYPRGPSPPVKP-KLLSLVDTKEVMRGPEEQPGYWVVTGA 585
Query: 605 KLDLEKGKICLRVKFSLLNICS 626
KL +E GKI ++ K+SLL + S
Sbjct: 586 KLCVEAGKISIKAKYSLLTVIS 607
>sp|Q9C7N2|CAD1_ARATH MACPF domain-containing protein CAD1 OS=Arabidopsis thaliana
GN=CAD1 PE=2 SV=1
Length = 561
Score = 419 bits (1078), Expect = e-116, Method: Compositional matrix adjust.
Identities = 254/614 (41%), Positives = 340/614 (55%), Gaps = 80/614 (13%)
Query: 26 IMSNTKRIVVVERAISSLGKGFDLTSDFRLKYCKGK--ERLVVLNDADHEREITVPGFGS 83
+ S+ + AI +LG+GFD+TSD RL YCKG RLV + + + GF
Sbjct: 11 VPSSEALTTTLRNAIQALGRGFDVTSDVRLLYCKGAPGSRLVRIEEGQNRDLELSHGFLL 70
Query: 84 VNEVSIDIKCDKGDRTRYQSDILNFNQMSEFFNQNSAIPGKIPSGLFNNMFNFHSGSWAK 143
N V DI C +G+ + + +F++M+E FN S + G IP G FN MFN+ +GSW
Sbjct: 71 PN-VPADIDCSRGNSGTQRISVCSFHEMAEEFNVRSGVKGNIPLGCFNAMFNY-TGSWQV 128
Query: 144 DAGNTKYLGLDGYYIILFNVHIDRYPLVLSDEVRNAVPSSWDPFALARFIEKYGTHIIVG 203
DA +TK L L GY+I L++V + + LVL +E+R AVPSSWDP +LA FIE YGTHI+
Sbjct: 129 DAASTKSLALVGYFIPLYDVKLAKLTLVLHNEIRRAVPSSWDPASLASFIENYGTHIVTS 188
Query: 204 LSIGGQDVVLVNQDNSSNLGPSELKKHLDDLGDQLFTGTCNFTPNIKEQKNKPPQAFKVF 263
++IGG+DVV + Q SS L SE++ +++D+ F + Q P +K
Sbjct: 189 VTIGGRDVVYIRQHQSSPLPVSEIENYVNDMIKHRFH-------EAESQSITGPLKYKDK 241
Query: 264 DPTPAAVNSFSSTSSKDGISVICSRRGGDPSAYSHCEWLLTVPSNPDAVHFNFIPITSLL 323
D I+VI RRGGD SH W TVP+ PD ++ F PI SLL
Sbjct: 242 D-----------------ITVIFRRRGGDDLEQSHARWAETVPAAPDIINMTFTPIVSLL 284
Query: 324 KGVPGKGFLSHAINLYLRYKPPITDLQYFLEFQAHKVWAPIHNDLPLGPTTNMTNPSP-- 381
+GVPG L+ AI LYL YKPPI DLQYFL++Q + WAP +N+ P
Sbjct: 285 EGVPGLRHLTRAIELYLEYKPPIEDLQYFLDYQIARAWAP--------EQSNLQRKEPVC 336
Query: 382 -ALHFHLMGPKLYVNTMQVTTEKIPVTGVRLYLEGRKCNRLAVHLQHLSITPTML----D 436
+L F LMGPKL+++ QVT + PVTG+RL LEG K NRL++HLQHL P +L D
Sbjct: 337 SSLQFSLMGPKLFISADQVTVGRKPVTGLRLSLEGSKQNRLSIHLQHLVSLPKILQPHWD 396
Query: 437 SKIDTDTQLWRGSDVTDDNHQYFEAIGGKYFSHICTAPVKYDPKWATRKDVSFIVTGAQL 496
S + W+G + D ++FE I K FSH+ T+P+++ IVTGAQL
Sbjct: 397 SHVPIGAPKWQGPEEQDS--RWFEPIKWKNFSHVSTSPIEHTETHIGDLSGVHIVTGAQL 454
Query: 497 HVQKHESKSILHLRLLFSKVSHAFIVQSSWAQSSSEFSQKSGFFSAISAPNSGNQEKEKK 556
V SK++LHL+LLFSKV I +S W + +SG E
Sbjct: 455 GVWDFGSKNVLHLKLLFSKVPGCTIRRSVWDHT--------------PVASSGRLE---- 496
Query: 557 PVVIVDSSVFPTGPPVPV-------RTQKLLKFVDTSQLCRGPQDSPGHWLVTGAKLDLE 609
P GP ++ KL K VD+S++ +GPQD PGHWLVTGAKL +E
Sbjct: 497 ----------PGGPSTSSSTEEVSGQSGKLAKIVDSSEMLKGPQDLPGHWLVTGAKLGVE 546
Query: 610 KGKICLRVKFSLLN 623
KGKI LRVK+SLLN
Sbjct: 547 KGKIVLRVKYSLLN 560
>sp|Q811M5|CO6_RAT Complement component C6 OS=Rattus norvegicus GN=C6 PE=2 SV=1
Length = 934
Score = 38.1 bits (87), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 77/191 (40%), Gaps = 33/191 (17%)
Query: 158 IILFNVHIDRYPLVLSDEVRNAV---PSSWDPFAL-ARFIEKYGTHIIVGLSIGGQDVVL 213
I + N + L LSD A+ P ++ FAL +R + +GTH S+GG+ +L
Sbjct: 320 IKVLNFTMKTTDLQLSDVFLKALIHLPLEYN-FALYSRIFDDFGTHYFTSGSLGGKYDLL 378
Query: 214 ------------VNQDNSSNLGPSELKKHLDDLGDQLFTGTCNFTPNIKEQK---NKPPQ 258
+ ++ + N E KK LF FT KE + N+ +
Sbjct: 379 YQFSRQELQNSGLTEEETRNCVRYETKKRF------LF-----FTKTYKEDRCTTNRLSE 427
Query: 259 AFK--VFDPTPAAVNSFSSTSSKDGISVICSRRGGDPSAYSHCEWLLTVPSNPDAVHFNF 316
+K + +++ S+ ++ + P A EWL +V NP V +
Sbjct: 428 KYKGSFLQGSEKSISLVQGGRSQQAAALAWEKGSSGPEANVFSEWLESVKENPAVVDYEL 487
Query: 317 IPITSLLKGVP 327
PI L++ +P
Sbjct: 488 APIIDLVRNIP 498
>sp|Q29RQ1|CO7_BOVIN Complement component C7 OS=Bos taurus GN=C7 PE=2 SV=1
Length = 843
Score = 36.6 bits (83), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 73/171 (42%), Gaps = 14/171 (8%)
Query: 180 VPSSWDPFALARFIEKYGTHIIVGLSIGGQDVVLVNQDNSS----NLGPSELKKHLDDLG 235
+PS +D A R I++YGTH + S+GG+ V+ + D+ + + +K
Sbjct: 283 LPSLYDYSAYRRLIDQYGTHYLQSGSLGGEYKVIFHMDSEKVKKFDFHSEDKRKCASSHF 342
Query: 236 DQLFTGTCNFTPNIKE-QKNKPPQAFKVFDPTPAAVNSFSSTSSKDGISVI-CSRRGGDP 293
LFT + ++E K+ + P S + G+S + + G+
Sbjct: 343 QFLFTSSKQKCTTMEEVLKSVSENEGNLLRGVPFVRGGHSGFLA--GLSYLDLNNPAGNK 400
Query: 294 SAYSHCEWLLTVPSNPDAVHFNFIPITSLLKGVPG----KGFLSHAINLYL 340
YS +W +VP P+ + P+ L+K VP K +L AI YL
Sbjct: 401 RRYS--QWAGSVPDLPEVIKQKLTPLYELVKEVPCASVKKLYLKRAIEEYL 449
>sp|Q9TUQ3|CO7_PIG Complement component C7 OS=Sus scrofa GN=C7 PE=1 SV=1
Length = 843
Score = 35.4 bits (80), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 73/187 (39%), Gaps = 46/187 (24%)
Query: 180 VPSSWDPFALARFIEKYGTHIIVGLSIGGQDVVLVNQDN----SSNLGPSELKKHLDDLG 235
+P +D A R I++YGTH + S+GG+ VL D+ S+LG + KK
Sbjct: 283 LPPLYDYSAYRRLIDQYGTHYLQSGSLGGEYKVLFYVDSEKVAESDLGSEDKKKCASSHI 342
Query: 236 DQLFTGTCNFTPNIKEQKNKPPQAFKVFDPTPAAVNSFSSTSSK--DGISVICSRRGGDP 293
LF K K+K K + A+ S S T S G+ + RGG P
Sbjct: 343 SFLF----------KSSKHK----CKAME---EALKSASGTQSNVLRGVPFV---RGGRP 382
Query: 294 ---SAYSHCE-------------WLLTVPSNPDAVHFNFIPITSLLKGVPGKG----FLS 333
S S+ E W +V P + P+ L+K VP +L
Sbjct: 383 GFVSGLSYLELDNPDGNKQRYSSWAGSVTDLPQVIKQKLTPLYELVKEVPCASVKRLYLK 442
Query: 334 HAINLYL 340
A+ YL
Sbjct: 443 RALEEYL 449
>sp|Q5SUQ9|CTC1_MOUSE CST complex subunit CTC1 OS=Mus musculus GN=Ctc1 PE=1 SV=2
Length = 1212
Score = 35.0 bits (79), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 163 VHIDRYPLVLSDEVRNAVPSSWDPFALARFIEKYGTHIIV 202
V ++++ LV+ EVR++ PS W+ +ARFI+K + V
Sbjct: 650 VRVEKFQLVVEREVRSSFPS-WEEMGMARFIQKKQARVYV 688
>sp|Q6CBP4|PPID_YARLI Peptidyl-prolyl cis-trans isomerase D OS=Yarrowia lipolytica
(strain CLIB 122 / E 150) GN=CPR6 PE=3 SV=1
Length = 367
Score = 33.5 bits (75), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 74/205 (36%), Gaps = 31/205 (15%)
Query: 376 MTNPSPALHFHLMGPKLYVNTMQVTTEKIPVTG--VRLYLEGRKCNRLA---VHLQHLSI 430
MTNP + G + ++ +K+P T R G K N A +H + S
Sbjct: 1 MTNPRVFFEVAIGGKTIGKIYFELFADKVPKTAENFRALCTGEKGNTQAGIPLHFKGSSF 60
Query: 431 TPTMLDSKIDTDTQLWRGSDVTDDNHQYFEAIGGKYFSHICTAPVKYD-PKWATRKDVSF 489
+ D + +G D T N E+I G+ F P +D P + +
Sbjct: 61 HRVIKDF-------MVQGGDFTAGNGTGGESIYGEKFPDEAF-PYPHDQPFLLSMANAGP 112
Query: 490 IVTGAQLHVQKHESKSILHLRLLFSKVSHAFIVQSSWAQSSSEFSQKSGFFSAISAPNSG 549
G+Q + E+ + + ++F K+ G I +G
Sbjct: 113 NTNGSQFFITTTETPHLDNKHVVFGKLLSG-----------------KGIVRQIERTETG 155
Query: 550 NQEKEKKPVVIVDSSVFPTGPPVPV 574
Q++ K+PV IVD P VPV
Sbjct: 156 EQDRPKQPVTIVDCGELPADFQVPV 180
>sp|B2TS45|MUTS2_CLOBB MutS2 protein OS=Clostridium botulinum (strain Eklund 17B / Type B)
GN=mutS2 PE=3 SV=1
Length = 785
Score = 33.5 bits (75), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 89/230 (38%), Gaps = 43/230 (18%)
Query: 129 LFNNMFNFHSGSWAKDAGNTKYLGLDGYYIILFNVHIDRYPLVLSDEVRNAVPSSWDPFA 188
L N F F G +A + K + D +FN+ R+PL+ D+V VP D
Sbjct: 270 LTNLDFIFSKGKYACELNAIKPMVRDDG---IFNIMSGRHPLIEKDKV---VP--LDVV- 320
Query: 189 LARFIEKYGTHIIVGLSIGGQDVVLVNQD-------------NSSNLGPSELKKHLDDLG 235
+++ T +I G + GG+ V L SSN S K+ D+G
Sbjct: 321 ---LGDEFDTLMITGPNTGGKTVTLKTVGLLHIMALSGLLIPASSNSSVSFFKEVFADIG 377
Query: 236 DQ------LFTGTCNFTP--NIKEQKNKPPQAFKVFDPTPAAVNSFSSTSSKDGISVICS 287
D+ L T + + T NI E N+ Q+ +FD + + I S
Sbjct: 378 DEQSIEQSLSTFSSHLTNIVNIMEYDNR--QSLILFDELGGGTDPAEGAALAIAIIENLS 435
Query: 288 RRGGDPSAYSHCEWLLTVPSNPD-----AVHFN---FIPITSLLKGVPGK 329
+G A +H L N D +V F+ P LL GVPGK
Sbjct: 436 SKGAKLIATTHYSELKAYALNKDRVENASVEFDINTLRPTYRLLIGVPGK 485
>sp|Q09773|MUG62_SCHPO Meiotically up-regulated gene 62 protein OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=mug62 PE=1 SV=1
Length = 1428
Score = 33.1 bits (74), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 13/148 (8%)
Query: 225 SELKKHLDDLGDQLFTGTCNFTPNIKEQKNKPPQA-FKVFDPTPAAVNSFSSTSSKDGIS 283
+EL+ L + +LF T K Q P +A F++ DP +FS + +D IS
Sbjct: 42 AELQPQLAKVSQKLFADISTATAAEKLQFTVPRRARFEINDPRNP---TFSMMALQDIIS 98
Query: 284 VICSRRGGDPSAYSHCEWLLTVPSNPDAVHFNFIPITSLLKGVPGKGFLSHAINLYLRYK 343
V+ RR +P++ +H + +AV +++ I + K F S A N ++ K
Sbjct: 99 VLEYRRNKNPTSTAH---ICIDKKGKEAVSYSWDKILN-----RAKQFASVAQN-HVGLK 149
Query: 344 PPITDLQYFLEFQAHKVWAPIHNDLPLG 371
P + Y+ + +A + I L LG
Sbjct: 150 PGTRVILYYRKSEASEYIISIFGCLLLG 177
>sp|Q6BH02|S2538_DEBHA Solute carrier family 25 member 38 homolog OS=Debaryomyces hansenii
(strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 /
IGC 2968) GN=DEHA2G22418g PE=3 SV=1
Length = 340
Score = 32.7 bits (73), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 6/66 (9%)
Query: 98 RTRYQSDILNFNQMSEFFNQNSAIPGKIPSGLFNNMFNFHSGSWAKDAGNTKYLGLDGYY 157
+TRY+S+I N+N M E F +N + G ++ NF GS+A A + Y G+ Y
Sbjct: 155 KTRYESNIYNYNSMYEGF-ENIYLDGNQKGQ--GSLKNFFKGSFATLARDCPYAGM---Y 208
Query: 158 IILFNV 163
++ + +
Sbjct: 209 VLFYEL 214
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 251,624,769
Number of Sequences: 539616
Number of extensions: 11373157
Number of successful extensions: 23333
Number of sequences better than 100.0: 15
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 23294
Number of HSP's gapped (non-prelim): 16
length of query: 626
length of database: 191,569,459
effective HSP length: 124
effective length of query: 502
effective length of database: 124,657,075
effective search space: 62577851650
effective search space used: 62577851650
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)