BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006913
(626 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224079888|ref|XP_002305959.1| predicted protein [Populus trichocarpa]
gi|222848923|gb|EEE86470.1| predicted protein [Populus trichocarpa]
Length = 674
Score = 630 bits (1626), Expect = e-178, Method: Compositional matrix adjust.
Identities = 361/673 (53%), Positives = 452/673 (67%), Gaps = 68/673 (10%)
Query: 16 FPFLTFAS-FSSSAKVPYR----RSAFRLSKPLIGEDGKIYACSEKTLFAFESNGTIAWS 70
F L AS F+ S P R+ RLS+PLIGEDG+IY CSEKTL+AFESNG+IAW+
Sbjct: 8 FMLLVIASVFTESQNYPREGPSVRTDLRLSRPLIGEDGRIYICSEKTLYAFESNGSIAWT 67
Query: 71 LDLDFTCNIGTAPVHGGTGEVYIVAENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAI 130
L + CN APVHG G++Y+VAE+RVL+++ + +S A +VF+G G+ G G I
Sbjct: 68 SYLSYACNASMAPVHGTVGKLYLVAESRVLRINFSDVRSSPPAVEVFFGPEKGQAGAGDI 127
Query: 131 AGIAVSTSSSSVYINVKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVP 190
G+A ST SSSV+IN+K R LFA+ HG+L WSAG VL Q GY GC K DC F+S P
Sbjct: 128 IGLAASTLSSSVFINIKNRGLFAYEMHGKLHWSAGAVLYQYGYSLGCRKGVKDCSFSSSP 187
Query: 191 VIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRAL 250
V+D+CE S+YISN GELYSLS SP+FNW+QDLSSFDK FT+TPGNNG LYVT+P +L
Sbjct: 188 VVDRCEASLYISNNAGELYSLSLRSPHFNWVQDLSSFDKNFTVTPGNNGRLYVTVPPLSL 247
Query: 251 VLALDTSSGNILWHKSVGPLGSAEYAPVVDSNGWISVGSLDGLLYSFSPSGVLNKFSKSD 310
VL LD GNILW S+GPLGSAE PVVDSNGW+S+GSLDG LYS SP+G L K+SK+
Sbjct: 248 VLTLDVLKGNILWQTSIGPLGSAECEPVVDSNGWVSIGSLDGFLYSISPTGALKKYSKAS 307
Query: 311 TSDSVIQSSPYW------------------FHLLGPSIGL-----KAILCLMVV------ 341
D VIQ SP+ H +G S + K +L M+V
Sbjct: 308 EQDYVIQVSPHLDCSGNAVYMSQTEMEGKVVHTVGESTCVSAMKPKGVLFTMLVPATGVI 367
Query: 342 -------GQFSSLLSKSDLQHFVLDESLVLAFLTASNQKLVASCSQTRPKLPSIYTGNER 394
G+ SS+LS+SDL++FVLDE L+L+F+ AS +V + +P LP NER
Sbjct: 368 HWSESYPGKVSSMLSQSDLKNFVLDEGLLLSFIAASTFVIVNAAGTGKP-LPCRSKRNER 426
Query: 395 AILLFLFFESVVLLVLAVLVRFCCIFWRKKKLQGQHLGNFLEKRRSLQLKKKAFDRSITE 454
ILLFL ES++L++LA LVRFCCIFW KKKLQ Q LG+FLEKRRSLQLKKK FDR+IT+
Sbjct: 427 TILLFLLLESMLLVILAGLVRFCCIFWTKKKLQDQGLGSFLEKRRSLQLKKKEFDRTITQ 486
Query: 455 LEKKVAEDAVANEVIKK----------------SVVCLGRDEAAASSESKSFPPVYDAKS 498
LEKK A +AVA+EVI++ + LGRD SE S PVYD KS
Sbjct: 487 LEKKAANEAVAHEVIEEIGDLVRERESISRKLSTTYSLGRDGKGLRSE--SLLPVYDGKS 544
Query: 499 RSYSFQGAKKESVTIFHTLSATSSAESSSERETSWVSEDKDQSTAKAKAKAKAKAPIKAE 558
RSYSFQ A+KESVTIFHTLS TSS ESS E+++ +++QS+ AK K KA+AP++ E
Sbjct: 545 RSYSFQSARKESVTIFHTLSNTSSGESSKEKDSDRDFHEENQSS--AKGKGKARAPVETE 602
Query: 559 SSSDGDGIMDKEYRRSPSEPASSSRGFINPLLLKQ----EKLQDKGEVVESMSSSIRSM- 613
SSSD D I +K Y RS SEP SSS+G+ NP ++Q E+L D+G+VVES + S R+
Sbjct: 603 SSSD-DDIFEKGYHRSSSEPTSSSKGYANPFFMEQELTEEELNDEGKVVESATGSGRTRS 661
Query: 614 LLLKRRRTLSSTN 626
+ LKRR+TLSSTN
Sbjct: 662 MWLKRRKTLSSTN 674
>gi|359488399|ref|XP_002279543.2| PREDICTED: uncharacterized protein LOC100253124 [Vitis vinifera]
Length = 647
Score = 630 bits (1624), Expect = e-178, Method: Compositional matrix adjust.
Identities = 346/611 (56%), Positives = 423/611 (69%), Gaps = 68/611 (11%)
Query: 25 SSSAKVPYRRSAFRLSKPLIGEDGKIYACSEKTLFAFESNGTIAWSLDLDFTCNIGTAPV 84
S SA+ P +++A RLS PLIG DG++Y CSE+ LFAFE NG+I+W++ L++TCN+G APV
Sbjct: 8 SVSAQGPSQKTACRLSNPLIGYDGRVYTCSERNLFAFERNGSISWTVPLNYTCNVGIAPV 67
Query: 85 HGGTGEVYIVAENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYI 144
HG G++Y+VAENRV+K++ IGT+ESA +VF+G G+ +G I G++VSTSSSSV+I
Sbjct: 68 HGDRGKIYLVAENRVMKINPSNIGTTESAAEVFFGPEPGQEVSGEIIGLSVSTSSSSVFI 127
Query: 145 NVKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNT 204
NVK R LFA+ G L WSAGPVL + GYRQGC + DCYF+S+PVID+CE SIY+SNT
Sbjct: 128 NVKNRGLFAYSLDGHLRWSAGPVLYRFGYRQGCKQNVKDCYFSSIPVIDRCEASIYMSNT 187
Query: 205 QGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWH 264
+GE+YSLS SP F WIQD SSFDK FT+TPGNNG LYVT+PVR LVLALD ++GNILW
Sbjct: 188 EGEIYSLSVRSPQFKWIQDFSSFDKVFTITPGNNGCLYVTVPVRVLVLALDVTTGNILWQ 247
Query: 265 KSVGPLGSAEYAPVVDSNGWISVGSLDGLLYSFSPSGVLNKFSKSDTSDSVIQSSPYW-- 322
++ GPL + E APVVDSNGWIS+GSLDG LYSFSP+G L KF ++ DSV+Q SP
Sbjct: 248 RNTGPLSTTECAPVVDSNGWISIGSLDGFLYSFSPTGSLKKFPRAAVLDSVVQVSPLLDC 307
Query: 323 -----------------------------------FHLLGPSIGLKAILCLMVVGQFSSL 347
F +L PS G G+FSSL
Sbjct: 308 SGYAVYISQTEMEEKISHVTGEYTCISALKPRNVVFTMLAPSTG-STYWSESYPGKFSSL 366
Query: 348 LSKSDLQHFVLDESLVLAFLTASN-----------QKLVASCSQTRPKLPSIYTGNERAI 396
L ++DLQ+FVLDES++LAF+ AS QKL ASCS+ RPK SIYTGNERAI
Sbjct: 367 LVETDLQNFVLDESVLLAFVAASKIGNPLPCRTTYQKLAASCSEARPKYLSIYTGNERAI 426
Query: 397 LLFLFFESVVLLVLAVLVRFCCIFWRKKKLQGQHLGNFLEKRRSLQLKKKAFDRSITELE 456
LLFL FES VL++LA LVRFCCIFWRKKKLQGQ LG FLEKR SL+L+KK FDR+ITELE
Sbjct: 427 LLFLLFESAVLVLLAGLVRFCCIFWRKKKLQGQDLGKFLEKRHSLRLQKKEFDRTITELE 486
Query: 457 KKVAEDAVANEVIKK----------------SVVCLGRDEAAASSESKSFPPVYDAKSRS 500
KK AE+A + V++K + LGRD K+ P+YD K+RS
Sbjct: 487 KKAAEEASTSAVLEKLGDLVQEREGIQRKLSTTYSLGRD--VTGLHRKTLLPLYDGKTRS 544
Query: 501 YSFQGAKKESVTIFHTLSATSSAESSSERETSWVSEDKDQSTAKAKAKAKAKAPIKAESS 560
YSFQGAKKESVTIFHT+S SS ES S+RE SW S + +S AKAKAKAKAKAPI SS
Sbjct: 545 YSFQGAKKESVTIFHTVSDASSGESYSDREISWHSFEDKESAAKAKAKAKAKAPIADGSS 604
Query: 561 SDGDGIMDKEY 571
SD D I ++Y
Sbjct: 605 SD-DRICKEDY 614
>gi|356551076|ref|XP_003543904.1| PREDICTED: uncharacterized protein LOC100817912 [Glycine max]
Length = 582
Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust.
Identities = 293/538 (54%), Positives = 374/538 (69%), Gaps = 31/538 (5%)
Query: 19 LTFASFSSSAKVPYRRSAFRLSKPLIGEDGKIYACSEKTLFAFESNGTIAWSLDLDFTCN 78
L +FSSS Y LSKPL+ +DG+IY CS+ FAFESNGTIAW++ LD+ CN
Sbjct: 46 LFVGTFSSSFISAYHL----LSKPLLRDDGRIYVCSQDNFFAFESNGTIAWTMHLDYKCN 101
Query: 79 IGTAPVHGGTGEVYIVAENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTS 138
+GTAPVHGG G++Y+V +NR+L + I TSE ++VF+G G G+ I G++VST
Sbjct: 102 LGTAPVHGGHGKIYLVVDNRILVISYGNIATSEPESKVFFGPGPGRVAEAEIIGLSVSTL 161
Query: 139 SSSVYINVKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGS 198
S++YINVK R LFA+ +HG+L+WS GPVL Q GYRQGC K DCYF SVPV+DQCEGS
Sbjct: 162 GSTIYINVKNRGLFAYHSHGRLIWSVGPVLYQFGYRQGCRKNLTDCYFASVPVLDQCEGS 221
Query: 199 IYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSS 258
IYISNT+GELY LS S YF WIQD SS DK FT+TPGNNG+L+VT P +ALVLALD S
Sbjct: 222 IYISNTEGELYCLSVRSRYFRWIQDFSSLDKNFTITPGNNGHLFVTFPAKALVLALDVFS 281
Query: 259 GNILWHKSVGPLGSAEYAPVVDSNGWISVGSLDGLLYSFSPSGVLNKFSKSDTSDSVIQS 318
GN+LW +S+GPL + APVVDSNGWIS+GSLDG LYSFSP+GVL KFS+ + +S+IQ
Sbjct: 282 GNVLWQRSIGPLSKVDSAPVVDSNGWISIGSLDGFLYSFSPTGVLKKFSRMNAENSMIQV 341
Query: 319 SPYW----FHLLGPSIGLKAILCLMVVGQF---SSLLSKSDLQHFVLDESLVLAFLTA-S 370
P+ F + I ++ + +G++ S++ K+ L ++ + + + +
Sbjct: 342 GPFLDCSGFAIYSSQIEMEGKVS-RTIGEYTVVSAIRPKAALFTVLVPATGSIYWSESYP 400
Query: 371 NQKLVASCSQTRPKLPSIYTGNERAILLFLFFESVVLLVLAVLVRFCCIFWRKKKLQGQH 430
QKL +SCSQ R KL SIYTGNERAI+LFL FES +LLVL LVRFCC FW K+KL+ Q
Sbjct: 401 GQKLASSCSQERTKLVSIYTGNERAIVLFLLFESALLLVLIGLVRFCCTFWAKEKLKDQG 460
Query: 431 LGNFLEKRRSLQLKKKAFDRSITELEKKVAEDAVANEVIKK----------------SVV 474
LG+FL+KR SL+LKKKA DR+ITELE+KVAE+ V NEV +K +
Sbjct: 461 LGSFLDKRCSLRLKKKALDRTITELEQKVAEETVDNEVFEKLGDIVRERECIERKLSTTY 520
Query: 475 CLGRDEAAASSESKSFPPVYDAKSRSYSFQGAKKESVTIFHTLSATSSAESSSERETS 532
LGRD S KS PV K++SYSFQ AK+++VT+F+TLS TSS E SSE ET+
Sbjct: 521 SLGRDR--THSRPKSVLPVQMGKAKSYSFQDAKQKNVTMFNTLSDTSSGEISSEGETN 576
>gi|356554679|ref|XP_003545671.1| PREDICTED: uncharacterized protein LOC100818993 [Glycine max]
Length = 551
Score = 520 bits (1339), Expect = e-144, Method: Compositional matrix adjust.
Identities = 294/572 (51%), Positives = 365/572 (63%), Gaps = 79/572 (13%)
Query: 20 TFASFSSSAKVPYRRSAFRLSKPLIGEDGKIYACSEKTLFAFESNGTIAWSLDLDFTCNI 79
TF+SF S+ + LSKPL+ +DG+IY CS FAFESNGTIAW + LD+ CN+
Sbjct: 16 TFSSFVSAYHL--------LSKPLLRDDGRIYVCSHDNFFAFESNGTIAWIMHLDYKCNL 67
Query: 80 GTAPVHGGTGEVYIVAENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSS 139
GTAPVHGG G++Y+VA+NR+L + IGTSE +VF+G G G I G++VST
Sbjct: 68 GTAPVHGGHGKIYLVADNRILVISYGNIGTSEPEAEVFFGPGPGHVAEAEIIGLSVSTLG 127
Query: 140 SSVYINVKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSI 199
S++YINVK R LFA+ + G LLWS PVL Q GYRQGC K +CYF SVP++D CEGSI
Sbjct: 128 STIYINVKNRGLFAYQSRGHLLWSVEPVLYQFGYRQGCRKNLTNCYFASVPLLDHCEGSI 187
Query: 200 YISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSG 259
YISNT+GELY LS S YF WIQD SS DK FT+T GNNG+LYVT+P +ALVLALD SG
Sbjct: 188 YISNTEGELYCLSVRSRYFRWIQDFSSLDKNFTITLGNNGHLYVTVPAKALVLALDVFSG 247
Query: 260 NILWHKSVGPLGSAEYAPVVDSNGWISVGSLDGLLYSFSPSGVLNKFSKSDTSDSVIQSS 319
N+LW +S+GPL + APVVDSNGWIS+GSLDG LYSFSP+GVL KFS+ + +S+IQ
Sbjct: 248 NVLWQRSIGPLSKVDSAPVVDSNGWISIGSLDGFLYSFSPTGVLKKFSRMNAENSIIQVG 307
Query: 320 PYW------------------FHLLGP-----SIGLKAILCLMVV-------------GQ 343
P+ H +G +I KA L M+V G
Sbjct: 308 PFLDCSGFAIYSSQIEMEGKISHTIGEYTVVSAIQPKAALFTMLVPATGSIYWSESYPGH 367
Query: 344 FSSLLSKSDLQHFVLDESLVLAFLTASNQKLVASCSQTRPKLPSIYTGNERAILLFLFFE 403
S+L SKSDL FV++E ++LAFL AS+QKL +SCSQ R KL S+YTGNERAI+LFL FE
Sbjct: 368 VSTLFSKSDLSQFVMNEEILLAFLAASSQKLASSCSQERTKLVSVYTGNERAIVLFLLFE 427
Query: 404 SVVLLVLAVLVRFCCIFWRKKKLQGQHLGNFLEKRRSLQLKKKAFDRSITELEKKVAEDA 463
S +LL+L LVRFCC FW K+KL+ Q LG+FL+ R + +
Sbjct: 428 SALLLILIGLVRFCCTFWAKEKLKDQGLGSFLDNRYGALFRSTNYS-------------- 473
Query: 464 VANEVIKKSVVCLGRDEAAASSESKSFPPVYDAKSRSYSFQGAKKESVTIFHTLSATSSA 523
LGRD A S K PV K+ +YSFQ AK++++T+ HTLS TSS+
Sbjct: 474 ------------LGRD--TAHSRPKPVLPVQMGKT-NYSFQYAKQKNMTMSHTLSDTSSS 518
Query: 524 ESSSERETSWVSEDKDQSTAKAKAKAKAKAPI 555
ESSSE ETS + ED D ST K KAK PI
Sbjct: 519 ESSSEGETSML-EDMDSST-----KGKAKTPI 544
>gi|298204384|emb|CBI16864.3| unnamed protein product [Vitis vinifera]
Length = 1165
Score = 520 bits (1338), Expect = e-144, Method: Compositional matrix adjust.
Identities = 283/505 (56%), Positives = 340/505 (67%), Gaps = 68/505 (13%)
Query: 100 LKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTHGQ 159
+K++ IGT+ESA +VF+G G+ +G I G++VSTSSSSV+INVK R LFA+ G
Sbjct: 1 MKINPSNIGTTESAAEVFFGPEPGQEVSGEIIGLSVSTSSSSVFINVKNRGLFAYSLDGH 60
Query: 160 LLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFN 219
L WSAGPVL + GYRQGC + DCYF+S+PVID+CE SIY+SNT+GE+YSLS SP F
Sbjct: 61 LRWSAGPVLYRFGYRQGCKQNVKDCYFSSIPVIDRCEASIYMSNTEGEIYSLSVRSPQFK 120
Query: 220 WIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPVV 279
WIQD SSFDK FT+TPGNNG LYVT+PVR LVLALD ++GNILW ++ GPL + E APVV
Sbjct: 121 WIQDFSSFDKVFTITPGNNGCLYVTVPVRVLVLALDVTTGNILWQRNTGPLSTTECAPVV 180
Query: 280 DSNGWISVGSLDGLLYSFSPSGVLNKFSKSDTSDSVIQSSPYW----------------- 322
DSNGWIS+GSLDG LYSFSP+G L KF ++ DSV+Q SP
Sbjct: 181 DSNGWISIGSLDGFLYSFSPTGSLKKFPRAAVLDSVVQVSPLLDCSGYAVYISQTEMEEK 240
Query: 323 --------------------FHLLGPSIGLKAILCLMVVGQFSSLLSKSDLQHFVLDESL 362
F +L PS G G+FSSLL ++DLQ+FVLDES+
Sbjct: 241 ISHVTGEYTCISALKPRNVVFTMLAPSTG-STYWSESYPGKFSSLLVETDLQNFVLDESV 299
Query: 363 VLAFLTASN-----------QKLVASCSQTRPKLPSIYTGNERAILLFLFFESVVLLVLA 411
+LAF+ AS QKL ASCS+ RPK SIYTGNERAILLFL FES VL++LA
Sbjct: 300 LLAFVAASKIGNPLPCRTTYQKLAASCSEARPKYLSIYTGNERAILLFLLFESAVLVLLA 359
Query: 412 VLVRFCCIFWRKKKLQGQHLGNFLEKRRSLQLKKKAFDRSITELEKKVAEDAVANEVIKK 471
LVRFCCIFWRKKKLQGQ LG FLEKR SL+L+KK FDR+ITELEKK AE+A + V++K
Sbjct: 360 GLVRFCCIFWRKKKLQGQDLGKFLEKRHSLRLQKKEFDRTITELEKKAAEEASTSAVLEK 419
Query: 472 ----------------SVVCLGRDEAAASSESKSFPPVYDAKSRSYSFQGAKKESVTIFH 515
+ LGRD K+ P+YD K+RSYSFQGAKKESVTIFH
Sbjct: 420 LGDLVQEREGIQRKLSTTYSLGRD--VTGLHRKTLLPLYDGKTRSYSFQGAKKESVTIFH 477
Query: 516 TLSATSSAESSSERETSWVS-EDKD 539
T+S SS ES S+RE SW S EDK+
Sbjct: 478 TVSDASSGESYSDREISWHSFEDKE 502
>gi|255570021|ref|XP_002525973.1| conserved hypothetical protein [Ricinus communis]
gi|223534705|gb|EEF36397.1| conserved hypothetical protein [Ricinus communis]
Length = 579
Score = 516 bits (1329), Expect = e-143, Method: Compositional matrix adjust.
Identities = 271/495 (54%), Positives = 337/495 (68%), Gaps = 53/495 (10%)
Query: 21 FASFSSSAKVPY-------RRSAFRLSKPLIGED-GKIYACSEKTLFAFESNGTIAWSLD 72
+A S+A PY R++ RLSKPLIG+D G+IY CS++ FAFESNG+IAWSL
Sbjct: 17 YADSISTANYPYALGQLGSTRTSSRLSKPLIGDDDGRIYTCSDRIFFAFESNGSIAWSLH 76
Query: 73 LDFTCNIGTAPVHGGTGEVYIVAENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAG 132
L +TCN APVHGG G++Y++AENRVL ++LL + TS ++VF+G G+ G G I G
Sbjct: 77 LAYTCNSSMAPVHGGRGKIYLIAENRVLNINLLNLRTSTPTSEVFFGPEKGQEGAGEIIG 136
Query: 133 IAVSTSSSSVYINVKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVI 192
+AVST SSSV+IN+K R LFA+M GQLLWSAGPVL Q GYR GC K DCYF SVP+I
Sbjct: 137 LAVSTLSSSVFINIKNRGLFAYMMRGQLLWSAGPVLSQFGYRLGCRKGISDCYFNSVPMI 196
Query: 193 DQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVL 252
D+CE S+YISNT GE+YSLS HSP+FNW+QDLSSFD+ FTLTPGNNG LYVT+P +A+VL
Sbjct: 197 DRCEASLYISNTAGEVYSLSLHSPHFNWVQDLSSFDRDFTLTPGNNGLLYVTVPTKAIVL 256
Query: 253 ALDTSSGNILWHKSVGPLGSAEYAPVVDSNGWISVGSLDGLLYSFSPSGVLNKFSKSDTS 312
AL S G+ILW K++GP + PVVDSNGWIS+GSLDG LYS SP+G + KF+K+
Sbjct: 257 ALGVSMGDILWQKNIGPFSVVDCTPVVDSNGWISIGSLDGFLYSISPTGEVKKFTKASEL 316
Query: 313 DSVIQSSPYW------------------FHLLG------PSIGLKAILCLMV-------- 340
+ VIQ SP+ H+LG I + LMV
Sbjct: 317 NYVIQVSPFLDCSGYAVYISQAEMVGKVSHILGEYNYVSAMIPKGVVFTLMVPTTGAVYW 376
Query: 341 ----VGQFSSLLSKSDLQHFVLDESLVLAFLTASNQKLVASCSQTRPKLPSIYTGNERAI 396
GQFSS LS+SDLQHF DE ++LAF+TA S+T LP NER I
Sbjct: 377 SESYPGQFSSSLSQSDLQHFAFDEGILLAFITA---------SRTGNTLPCRSKSNERTI 427
Query: 397 LLFLFFESVVLLVLAVLVRFCCIFWRKKKLQGQHLGNFLEKRRSLQLKKKAFDRSITELE 456
+LFL +ES+VL+VLA LVRFCCIFW KKKLQ Q L FLE+RRSLQ +KK R+ITELE
Sbjct: 428 MLFLLYESIVLVVLAGLVRFCCIFWSKKKLQRQDLAVFLERRRSLQRQKKELSRTITELE 487
Query: 457 KKVAEDAVANEVIKK 471
+K AE+AV N+ +++
Sbjct: 488 QKAAEEAVGNQAMEE 502
>gi|358346601|ref|XP_003637355.1| hypothetical protein MTR_082s0039 [Medicago truncatula]
gi|355503290|gb|AES84493.1| hypothetical protein MTR_082s0039 [Medicago truncatula]
Length = 570
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 271/543 (49%), Positives = 346/543 (63%), Gaps = 75/543 (13%)
Query: 90 EVYIVAENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGR 149
++Y+VAENR+LK+D IG SE A ++F+G G+ I G++VST SS+V+INVK R
Sbjct: 31 DIYLVAENRILKIDYGNIGISEPAVELFFGPEPGQKAETKIIGLSVSTLSSTVFINVKNR 90
Query: 150 ALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELY 209
LFA+++HG+LLWS GP L Q GYRQGC K DCYF+SVPV+DQCE SIYI+NT+GELY
Sbjct: 91 GLFAYLSHGRLLWSLGPALYQFGYRQGCRKNLTDCYFSSVPVLDQCEASIYIANTEGELY 150
Query: 210 SLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGP 269
LS F WIQD SS DK+FT+TPGNNG+LYVT+P RAL+LALD +GNILW SVGP
Sbjct: 151 CLSVRGRDFRWIQDFSSLDKSFTITPGNNGHLYVTVPTRALILALDVFTGNILWQGSVGP 210
Query: 270 LGSAEYAPVVDSNGWISVGSLDGLLYSFSPSGVLNKFSKSDTSDSVIQSSPYW------- 322
L + APVVDSNGWIS+GSLDG LYSFSP+G+L KFS+ +T +S+ Q P+
Sbjct: 211 LSKIDCAPVVDSNGWISIGSLDGFLYSFSPTGILKKFSRKNTENSIAQVGPFLDCSGFAV 270
Query: 323 -----------FHLLGP-----SIGLKAILCLMVV-------------GQFSSLLSKSDL 353
H +G +I KA + M+V G+ S+LLSKSDL
Sbjct: 271 YSSQIEMEGKVSHGIGEYTVVSAIRPKAAIFTMLVPATGSIYWSEGYPGKLSTLLSKSDL 330
Query: 354 QHFVLDESLVLAFLTASN-----------QKLVASCSQTRPKLPSIYTGNERAILLFLFF 402
FV++E ++L F+ AS QKL +SCSQ R KL +IY+GNER I FL F
Sbjct: 331 SQFVVNEEILLTFIAASKVDTPLQCRTTGQKLASSCSQARNKLVNIYSGNERTIEFFLLF 390
Query: 403 ESVVLLVLAVLVRFCCIFWRKKKLQGQHLGNFLEKRRSLQLKKKAFDRSITELEKKVAED 462
ES +L++L LVRFCC FW K+KLQ Q LG+FL+KR SLQL+KKA ++I+ELEKK AE+
Sbjct: 391 ESFLLVLLIGLVRFCCTFWAKRKLQDQGLGSFLDKRCSLQLQKKALVKTISELEKKSAEE 450
Query: 463 AVANEVIKK----------------SVVCLGRDEAAASSESKSFPPVYDAKSRSYSFQGA 506
+V NEV +K + LGRD +S+SKS P+ K +SYSFQGA
Sbjct: 451 SVDNEVYEKLGDTVRKKENIERKLSTTYSLGRDR--TNSKSKSMLPLQIGKRKSYSFQGA 508
Query: 507 KKESVTIFHTLSATSSAESSSERETSWVSEDKDQSTAKAKAKAKAKAP---IKAESSSDG 563
KK+ + +F TLS SS ESS E E V + AK K K P + + SS+D
Sbjct: 509 KKQKLKMFDTLSDASS-ESSIEGERDMV------EVLDSSAKEKGKTPMVEVTSTSSNDE 561
Query: 564 DGI 566
D I
Sbjct: 562 DFI 564
>gi|358346856|ref|XP_003637480.1| hypothetical protein MTR_087s0018, partial [Medicago truncatula]
gi|355503415|gb|AES84618.1| hypothetical protein MTR_087s0018, partial [Medicago truncatula]
Length = 543
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 250/503 (49%), Positives = 322/503 (64%), Gaps = 71/503 (14%)
Query: 39 LSKPLIGEDGKIYACSEKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAENR 98
LSKPLIG+DG+IY CS+KT +FE+NGTIAWS+ +D+ CN+G APVH G G++Y+VAENR
Sbjct: 30 LSKPLIGDDGRIYVCSDKTFLSFETNGTIAWSIHVDYKCNVGLAPVHAGLGKIYLVAENR 89
Query: 99 VLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTHG 158
+LK+D IG SE A ++F+G G+ I G++VST SS+V+INVK R LFA+++HG
Sbjct: 90 ILKIDYGNIGISEPAVELFFGPEPGQKAETKIIGLSVSTLSSTVFINVKNRGLFAYLSHG 149
Query: 159 QLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYF 218
+LLWS GP L Q GYRQGC K DCYF+SVPV+DQCE SIYI+NT+GELY LS F
Sbjct: 150 RLLWSLGPALYQFGYRQGCRKNLTDCYFSSVPVLDQCEASIYIANTEGELYCLSVRGRDF 209
Query: 219 NWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPV 278
WIQD SS DK+FT+TPGNNG+LYVT+P RAL+LALD +GNILW SVGPL + APV
Sbjct: 210 RWIQDFSSLDKSFTITPGNNGHLYVTVPTRALILALDVFTGNILWQGSVGPLSKIDCAPV 269
Query: 279 VDSN---------GWISVGSLDGLLYSFSPSGVLNKFSKSDTSDSVIQSSPYW------- 322
VDSN G++S +D ++ P N K T +S+ Q P+
Sbjct: 270 VDSNGIPISLDYDGYLSAHWMDSFIHFRQPEYSRNSQEKI-TENSIAQVGPFLDCSGFAV 328
Query: 323 ------------------------------FHLLGPSIG----LKAILCLMVVGQF---- 344
F +L P+ G K IL +++ F
Sbjct: 329 YSSQIEMEGKVSHGIGEYTVVSAIRPKAAIFTMLVPATGSIYWSKDILVHILIFGFNDRL 388
Query: 345 -----SSLLSKSDLQHFVLDESLVLAFLTASN-----------QKLVASCSQTRPKLPSI 388
S+LLSKSDL FV++E ++L F+ AS QKL +SCSQ R KL +I
Sbjct: 389 LSCKLSTLLSKSDLSQFVVNEEILLTFIAASKVDTPLQCRTTGQKLASSCSQARNKLVNI 448
Query: 389 YTGNERAILLFLFFESVVLLVLAVLVRFCCIFWRKKKLQGQHLGNFLEKRRSLQLKKKAF 448
Y+GNER I FL FES +L++L LVRFCC FW K+KLQ Q LG+FL+KR SLQL+KKA
Sbjct: 449 YSGNERTIEFFLLFESFLLVLLIGLVRFCCTFWAKRKLQDQGLGSFLDKRCSLQLQKKAL 508
Query: 449 DRSITELEKKVAEDAVANEVIKK 471
++I+ELEKK AE++V NEV +K
Sbjct: 509 VKTISELEKKSAEESVDNEVYEK 531
>gi|357130443|ref|XP_003566858.1| PREDICTED: uncharacterized protein LOC100834401 [Brachypodium
distachyon]
Length = 703
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 260/667 (38%), Positives = 375/667 (56%), Gaps = 90/667 (13%)
Query: 39 LSKPLIGEDGKIYACSEKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAENR 98
LS PLIG G+I ACS K L AFE NG+IAW + L + C AP+ ++Y+VAE++
Sbjct: 48 LSPPLIGHGGRIVACSGKNLLAFEPNGSIAWIVPLGYNCKQDVAPI-TEREKIYLVAEDK 106
Query: 99 VLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAF-MTH 157
V+K+ + T + AT+VF+ S G + + G++ ++S SS+++ + R LF+F + +
Sbjct: 107 VIKITPRNLRTGDPATEVFFSYTSTPGRSEELIGLSTASSYSSLFLTIMNRGLFSFSLRN 166
Query: 158 GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPY 217
GQLLWSAGPVLD+ GYR GC CYF S PV+DQCEG++YISN +G+LYS+ HS
Sbjct: 167 GQLLWSAGPVLDRFGYRIGCKGNISGCYFNSAPVVDQCEGTLYISNNEGQLYSMYIHSRK 226
Query: 218 FNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAP 277
+ WIQDLSS DK T+ PGNNG LYV +P +++V+ D +G+I W +SVGPL + + P
Sbjct: 227 YRWIQDLSSIDKVMTIAPGNNGRLYVVLPRKSIVMGFDVLTGHISWQQSVGPLSNEKVLP 286
Query: 278 VVDSNGWISVGSLDGLLYSFSPSGVLNKFSKSDTSDSVIQSSPYW--------------- 322
VDSNGWIS+GSLDG LYS SP G + KF + + +SVI +SP
Sbjct: 287 AVDSNGWISIGSLDGTLYSVSPDGDIRKFLQRTSPNSVIHASPVLDCSGFSVYISQTIME 346
Query: 323 ----------------------FHLLGPSIGLKAILCLMVVGQFSSLLSKSDLQHFVLDE 360
F LL P+ G G+ + LLS SDL +F LDE
Sbjct: 347 AKSSQTIGDYTYVSAMKPSSILFTLLAPATG-TTYWTEKYPGELADLLSSSDLNYFTLDE 405
Query: 361 SLVLAFLTAS----------NQKLVASCSQTRPKLPSIYTGNERAILLFLFFESVVLLVL 410
+++L L+A ++K V+ +++PK G+ LL FF+ +V+++
Sbjct: 406 TILLTALSAGSTNWQHHPMLHEKYVSFLEKSKPKFVHGDPGDHNHALLLFFFQLIVIVIQ 465
Query: 411 AVLVRFCCIFWRKKKLQGQHLGNFLEKRRSLQLKKKAFDRSITELEKKVAEDAVANEVIK 470
+V+VRFCCIFWRKKKLQ L FLEKRRSL K++ + I+ELE+K EDA +NE+++
Sbjct: 466 SVIVRFCCIFWRKKKLQHNGLQKFLEKRRSLHSKRRILGKIISELEQKAVEDASSNEILE 525
Query: 471 K----------------SVVCLGRDEAAASSESKSFPPVYDAKSRSYSFQGAKKESVTIF 514
+ + LGRD S S P+Y+ K +S+SF GA++ES+TIF
Sbjct: 526 QLGEMVKAKEGVERKLYTSYSLGRDVLGLRQRS-SILPLYNGKHKSHSFHGAQRESITIF 584
Query: 515 HTLSATSSAESSS--------ERETSWVSEDKDQSTAKAKAKAKAKAPIKAESSSDGDGI 566
+TLS TSS+E + + ED + T + + +A A+ + G
Sbjct: 585 NTLSNTSSSEDRTTSSYSSGSGSCSGSSCEDMESDT-RFNSAGEAGPSNTADVAVGAQG- 642
Query: 567 MDKEYRRSPSEPASSSRGFINPLLLK----QEKLQDKGE-VVESM--SSSIRSMLLLKRR 619
+ P++ S R F NPL ++ E L + E ++E+M S+ + LKRR
Sbjct: 643 ------KCPADAEPSYRVFTNPLYVQGESSGESLSRRQEFLMETMHQGSAPTKRMWLKRR 696
Query: 620 RTLSSTN 626
RTLSSTN
Sbjct: 697 RTLSSTN 703
>gi|297807631|ref|XP_002871699.1| hypothetical protein ARALYDRAFT_488440 [Arabidopsis lyrata subsp.
lyrata]
gi|297317536|gb|EFH47958.1| hypothetical protein ARALYDRAFT_488440 [Arabidopsis lyrata subsp.
lyrata]
Length = 640
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 253/593 (42%), Positives = 342/593 (57%), Gaps = 73/593 (12%)
Query: 39 LSKPLIGEDGKIYACSEKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAENR 98
LSK LIG+DG++YACS+ F+FESNG+IAWS+ ++F CN +PV+ G ++ ++AENR
Sbjct: 37 LSKTLIGDDGRVYACSDNDFFSFESNGSIAWSVHMNFKCNTDFSPVYSGFKQMLVLAENR 96
Query: 99 VLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTHG 158
+L+V + GT +S ++F+ G I G AVS SS SVYI VK L+A+
Sbjct: 97 ILRVIFPRNGT-KSEPELFFDPGE------TILGFAVSISSYSVYITVKNHGLYAYNMFR 149
Query: 159 QLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYF 218
Q LW A P +++ GYR GC K +C F S PVID CEGSIYISN +GELYSLS Y+
Sbjct: 150 QQLWIAEPKIERFGYRLGCRKDYDNCTFNSRPVIDSCEGSIYISNNEGELYSLSLRGTYY 209
Query: 219 NWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYA-P 277
WIQD S D+ FT+TPGNNG +YV P+++LV ALD+ SG+ILW K+VGPL + P
Sbjct: 210 QWIQDFSLVDRFFTVTPGNNGLVYVVFPMKSLVFALDSFSGDILWQKTVGPLAETSASDP 269
Query: 278 VVDSNGWISVGSLDGLLYSFSPSGVLNKFSKSDTSDSVIQSSP------YWFHLLGPSIG 331
V+DSN W S+GSLDG LYSFS +G L+K K+ +DSVIQ P Y ++ +
Sbjct: 270 VIDSNSWASIGSLDGTLYSFSRTGELHKIPKNAETDSVIQIEPLLDCSGYAVYVSQTKLE 329
Query: 332 LK------------------AILCLMV------------VGQFSSLLSKSDLQHFVLDES 361
K A+ L+V Q LL DLQHF+LDE
Sbjct: 330 GKIDHVIEDYTYVSAKKPETAVFSLVVPETRSICWSQSYSDQILGLLLDEDLQHFLLDER 389
Query: 362 LVLAFLTAS-----------NQKLVASCSQTRPKLPSIYTGNERAILLFLFFESVVLLVL 410
+VLAF+ AS ++KL +SCS + P+ IY GNERAI+ FL FE V++++
Sbjct: 390 IVLAFVAASSSGNPFRCRSKHEKLSSSCSFSEPEHLDIYIGNERAIIWFLLFEFVIIVLF 449
Query: 411 AVLVRFCCIFWRKKKLQGQHLGNFLEKRRSLQLKKKAFDRSITELE----------KKVA 460
A LVRFC IFW+KKKLQ + FL+KRR L K + D++IT L+ K+
Sbjct: 450 AALVRFCFIFWKKKKLQDRPFSAFLDKRRLLHRKSRDIDKTITRLQSESTANESTVDKIG 509
Query: 461 EDAVANEVIKK---SVVCLGRDEAAASSESKSFP-PVYDAKSRSYSFQGAKKESVTIFHT 516
+ E +++ S LGRD + S+ K + P+Y SRS+SFQ + ESVTIF T
Sbjct: 510 DLIQERENVRRKLTSTYSLGRDIDESKSKLKDYVLPLYGGGSRSFSFQNRENESVTIFQT 569
Query: 517 LSATSSAESSSERETSWVSEDKDQSTAKAKAKAKAKAPIKAE---SSSDGDGI 566
SS+E S R+ + + D + K + A SS+DGDGI
Sbjct: 570 PRDESSSEESY-RDQHYDDDVADDEHDEDDLDRNQKGKLLAHSEGSSNDGDGI 621
>gi|15237248|ref|NP_197106.1| gamete-expressed 3 [Arabidopsis thaliana]
gi|75174175|sp|Q9LFS2.1|GEX3_ARATH RecName: Full=Protein GAMETE EXPRESSED 3; Flags: Precursor
gi|9755648|emb|CAC01801.1| hypothetical protein [Arabidopsis thaliana]
gi|332004852|gb|AED92235.1| gamete-expressed 3 [Arabidopsis thaliana]
Length = 641
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 254/597 (42%), Positives = 341/597 (57%), Gaps = 70/597 (11%)
Query: 33 RRSAFRLSKPLIGEDGKIYACSEKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVY 92
++S LSK LIG+DG++YACS+ F+FESNG+IAWS+ ++F CN APV+ G ++
Sbjct: 37 KKSVRILSKILIGDDGRVYACSDNDFFSFESNGSIAWSVHMNFKCNTDFAPVYSGFNQML 96
Query: 93 IVAENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALF 152
++AENR+L+V + GT +S ++F+ G I G AVS SSSSVYI VK L+
Sbjct: 97 LLAENRILRVIFPRNGT-KSEPELFFDPGE------TILGFAVSVSSSSVYITVKNHGLY 149
Query: 153 AFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLS 212
A+ Q LW A P +++ GYR GC K +C F S PVID CEGSIYISN +GELYSLS
Sbjct: 150 AYNMFRQQLWIAEPKIERFGYRLGCRKDFDNCTFNSRPVIDSCEGSIYISNNEGELYSLS 209
Query: 213 AHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGS 272
Y+ WIQD S D+ FT+TPGNNG +YV P+++LV ALD+ SG+ILW K++GPL
Sbjct: 210 LRGTYYQWIQDFSLVDRFFTVTPGNNGLVYVVFPIKSLVFALDSFSGDILWQKTIGPLAE 269
Query: 273 AEYA-PVVDSNGWISVGSLDGLLYSFSPSGVLNKFSKSDTSDSVIQSSPYW--------- 322
+ PV+DSN W S+GSLDG LYSFS +G L K K+ +DSVIQ P
Sbjct: 270 TSASDPVIDSNSWASIGSLDGTLYSFSRTGDLYKIPKNAETDSVIQIEPLLDCSGYAVYV 329
Query: 323 ---------------FHLLGPSIGLKAILCLMV------------VGQFSSLLSKSDLQH 355
+ + A+ L+V Q LL DLQH
Sbjct: 330 SQTKFEGMIDRVIEDYTYVSAKKPETAVFSLVVPETRSIYWSQSYSDQIPGLLLDEDLQH 389
Query: 356 FVLDESLVLAFLTAS-----------NQKLVASCSQTRPKLPSIYTGNERAILLFLFFES 404
FVLDE + LAF+ AS ++KL +SCS P+ IY GNERAI+ FL FE
Sbjct: 390 FVLDERIALAFVAASSSGNPFRCRSKHEKLSSSCSFAEPEHLDIYIGNERAIIWFLLFEF 449
Query: 405 VVLLVLAVLVRFCCIFWRKKKLQGQHLGNFLEKRRSLQLKKKAFDRSITELE-----KKV 459
V++++ A LVRFC IFW+KKKLQ + FL+KRR L K + D++IT L+ +
Sbjct: 450 VIMVLFAALVRFCFIFWKKKKLQDRPFSTFLDKRRLLHRKSREIDKTITRLQNESTANES 509
Query: 460 AEDAVANEVIKK--------SVVCLGRDEAAASSESKSFP-PVYDAKSRSYSFQGAKKES 510
A D + + + K+ S LGRD + S+ K + P+Y SRS+S++ + ES
Sbjct: 510 AVDKIGDLIQKRENVKRKLSSTYSLGRDIDESKSKLKDYVLPLYGGSSRSFSYRNRENES 569
Query: 511 VTIFHTLSATSSAESSSERETSWVSEDKDQSTAKAKAKAKAKAPIKAE-SSSDGDGI 566
+TIF T S SS+E S E D + K K K +E SS+DGDGI
Sbjct: 570 ITIFQTPSDESSSEESYRDEHYDDVADDEHDEDDLDRKQKGKLLAHSEGSSNDGDGI 626
>gi|90657610|gb|ABD96909.1| hypothetical protein [Cleome spinosa]
Length = 562
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 244/529 (46%), Positives = 314/529 (59%), Gaps = 84/529 (15%)
Query: 18 FLTFASFSSSAKVP----YRRSAFRLSKPLIGEDGKIYACSEKTLFAFESNGTIAWSLDL 73
L+F FS+ A+ P Y+ S LSKPL+G+DG+IYACSE F+FE+NG+IAWS+ L
Sbjct: 9 LLSFFIFSAFAQFPDQTAYKDSVRVLSKPLVGDDGRIYACSENDFFSFEANGSIAWSVHL 68
Query: 74 DFTCNIGTAPVHGGTGEVYIVAENRVLKVDLLKIGTS--ESATQVFYGTGSGKGGTGAIA 131
+F C+ +APV GTG++ ++AENR+L +D + GTS +S ++VF+ G I
Sbjct: 69 NFKCDHASAPVRSGTGQILVLAENRILIIDFNRNGTSSNQSESEVFFDPGE------TIL 122
Query: 132 GIAVSTSSSSVYINVKGRALFAF-MTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVP 190
G AVS+SSSSVY VK R L+A+ M Q LW A P ++ GYR GC + DC FTS P
Sbjct: 123 GFAVSSSSSSVYFTVKNRGLYAYNMLQQQQLWIAEPKFERFGYRLGCRRDFQDCSFTSPP 182
Query: 191 VIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRAL 250
VID CE SIYISN QGELYSLS H+P+F WIQDLS D+ F +TPGNNG +YV PV++L
Sbjct: 183 VIDACEASIYISNNQGELYSLSIHAPHFQWIQDLSLVDRFFAVTPGNNGLVYVVFPVKSL 242
Query: 251 VLALDTSSGNILWHKSVGPLGSAEYAPVVDSNGWISVGSLDGLLYSFSPSGVLNKFSKSD 310
VLALD+ SGNI W K+VGPL S+ PV+DSNGW+S+GSLDG +YSFS +G L KF +
Sbjct: 243 VLALDSFSGNIQWQKNVGPLASSGCGPVIDSNGWVSIGSLDGSIYSFSRTGKLKKFPRHT 302
Query: 311 TSDSVIQSSPYW-------------------------------------FHLLGPSIGLK 333
+DSVIQ P F LL P G
Sbjct: 303 DADSVIQVDPLLDCSGNAIYVSQTKMEGKVDRVIGEYTYVSAKKPKNAVFTLLVPETG-S 361
Query: 334 AILCLMVVGQFSSLLSKSDLQHFVLDESLVLAFLTASNQKLVASCSQTRPKLPSIYTGNE 393
+ SSLLS+ DLQHFVLDE +VLAFL AS + E
Sbjct: 362 VYWSQSYPDKISSLLSEKDLQHFVLDERIVLAFLAASRK--------------------E 401
Query: 394 RAILLFLFFESVVLLVLAVLVRFCCIFWRKKKLQGQHLGNFLEKRRSLQL-------KKK 446
R I+ F+ FE V +++L+ LVRFCC+FW+KKK+Q Q L +FL KR L KKK
Sbjct: 402 RGIIWFILFEFVTIVLLSGLVRFCCVFWKKKKIQEQPLRSFLRKRVMTSLACTPSNMKKK 461
Query: 447 AFDRSITELEKKVAEDAVANEVIKKSVVCLGRDEAAASSESK-SFPPVY 494
R+ITELE + + V +EV + + GRDE +SE + S P Y
Sbjct: 462 GIGRTITELEMEGSSGDV-DEVTEIT----GRDEGRTNSEIQGSVLPFY 505
>gi|147812756|emb|CAN63828.1| hypothetical protein VITISV_006636 [Vitis vinifera]
Length = 1017
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 209/379 (55%), Positives = 262/379 (69%), Gaps = 38/379 (10%)
Query: 29 KVPYRRSAFRLSKPLIGEDGKIYACSEKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGT 88
+V R RLS PLIG DG++Y CSE+ LFAFE NG+I+W++ L++TCN+G APVHG
Sbjct: 15 EVLLRPRTERLSNPLIGYDGRVYTCSERNLFAFERNGSISWTVPLNYTCNVGIAPVHGDR 74
Query: 89 GEVYIVAENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKG 148
G++Y+VAENRV+K++ IGT+ESA +VF+G G+ +G I G++VSTSSSSV+INVK
Sbjct: 75 GKIYLVAENRVMKINPSNIGTTESAAEVFFGPEPGQEVSGEIIGLSVSTSSSSVFINVKN 134
Query: 149 RALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGEL 208
R LFA+ G L WSAGPVL + GYRQGC + DCYF+S+PVID+CE SIY+SNT+GE+
Sbjct: 135 RGLFAYSLDGHLRWSAGPVLYRFGYRQGCKQNVXDCYFSSIPVIDRCEASIYMSNTEGEI 194
Query: 209 YSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVG 268
YSLS SP F WIQD SSFDK FT+TPGNNG LYVT+PVR LVLALD ++GNILW ++ G
Sbjct: 195 YSLSVRSPQFKWIQDFSSFDKVFTITPGNNGXLYVTVPVRVLVLALDVTTGNILWQRNTG 254
Query: 269 PLGSAEYAPVVDSNGWISVGSLDGLLYSFSPSGVLNKFSKSDTSDSVIQSSPYW------ 322
PL + E APVVDSNGWIS+GSLDG LYSFSP+G L KF ++ DSV+Q SP
Sbjct: 255 PLSTTECAPVVDSNGWISIGSLDGFLYSFSPTGSLKKFPRAAVLDSVVQVSPLLDCSGYA 314
Query: 323 -------------------------------FHLLGPSIGLKAILCLMVVGQFSSLLSKS 351
F +L PS G G+FSSLL +
Sbjct: 315 VYISQTEMEEKISHVTGEYTCISALKPRNVVFTMLAPSTG-STYWSESYPGKFSSLLVXT 373
Query: 352 DLQHFVLDESLVLAFLTAS 370
DLQ+FVLDES++LAF+ AS
Sbjct: 374 DLQNFVLDESVLLAFVAAS 392
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 133/272 (48%), Positives = 154/272 (56%), Gaps = 75/272 (27%)
Query: 372 QKLVASCSQTRPKLPSIYTGNERAILLFLFFESVVLLVLAVLVRFCCIFWRKKKLQGQHL 431
QKL ASCS+ RPK SIYTGNERAILLFL FES VL++LA LVRFCCIFWRKKKLQGQ L
Sbjct: 507 QKLAASCSEARPKYXSIYTGNERAILLFLLFESAVLVLLAGLVRFCCIFWRKKKLQGQDL 566
Query: 432 GNF-----------------------------------LEK------------------- 437
G F LEK
Sbjct: 567 GKFLEKRGFCSDIKSIXFCRLRVSLFHEVATTSLKHGFLEKNDFSTVKLLNAMDMLLTFF 626
Query: 438 --RRSLQLKKKAFDRSITELEKKVAEDAVANEVIKK----------------SVVCLGRD 479
+ SL+L+KK FDR+ITELEKK AE+A + V++K + LGRD
Sbjct: 627 TLQHSLRLQKKEFDRTITELEKKAAEEASTSAVLEKLGDLVQEREGIQRKLSTTYSLGRD 686
Query: 480 EAAASSESKSFPPVYDAKSRSYSFQGAKKESVTIFHTLSATSSAESSSERETSWVSEDKD 539
K+ P+YD K+RSYSFQGAKKESVTIFHT+S SS ES S+RE SW S +
Sbjct: 687 --VTGLHRKTLLPLYDGKTRSYSFQGAKKESVTIFHTVSDASSGESYSDREISWHSFEDK 744
Query: 540 QSTAKAKAKAKAKAPIKAESSSDGDGIMDKEY 571
+S AKAKAKAKAKAPI SSSD D I ++Y
Sbjct: 745 ESAAKAKAKAKAKAPIADGSSSD-DRICKEDY 775
>gi|242053541|ref|XP_002455916.1| hypothetical protein SORBIDRAFT_03g027240 [Sorghum bicolor]
gi|241927891|gb|EES01036.1| hypothetical protein SORBIDRAFT_03g027240 [Sorghum bicolor]
Length = 637
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/544 (39%), Positives = 299/544 (54%), Gaps = 83/544 (15%)
Query: 39 LSKPLIGEDGKIYACSEKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAENR 98
LS P I DG++ ACS K L FE NG+ AW + L CN +PV G +VY+VAE++
Sbjct: 50 LSAPSIAHDGRLVACSGKDLLGFEPNGSFAWIVPLGHMCNDSISPVFEGE-QVYLVAEDK 108
Query: 99 VLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTHG 158
V+KV K+ T+E A +VF+ + G + I G+A+S SS+++ ++ R LFAF G
Sbjct: 109 VIKVTPRKVRTAEPALEVFFSHNTTSGRSEEIIGLAISGRYSSLFLTIRNRGLFAFSLRG 168
Query: 159 QLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYF 218
+L WS GP L+ YR GC + CYF S PV+DQCEG++YISNT+G+LYSL +
Sbjct: 169 ELQWSIGPALNLFDYRLGCKRNVSGCYFDSAPVLDQCEGALYISNTEGQLYSLYIDNRGI 228
Query: 219 NWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPV 278
WIQDLSS K T+ PGN+G LY+ P +++++ +D S+GNI W +++GP+ + + P
Sbjct: 229 RWIQDLSSHGKVMTVAPGNSGRLYIVFPRKSIMVGIDVSTGNISWTQNIGPISNEKNFPT 288
Query: 279 VDSNGWISVGSLDGLLYSFSPSGVLNKFSKSDTSDSVIQSSPYW---------------- 322
VDSNGW+S+GSLDG LYS SP G + KF +DSVI P
Sbjct: 289 VDSNGWMSIGSLDGTLYSISPDGDMRKFLAKTANDSVIHVGPVLDCSGFSMYVAKTIVEG 348
Query: 323 ---------------------FHLLGPSIGLKAILCLMVVGQFSSLLSKSDLQHFVLDES 361
F LL P+ G G+ S+LLS SD+ F +DE+
Sbjct: 349 KLIQTTGDYTYVSAKKPSFISFTLLAPATG-TIYWTGEYPGELSNLLSSSDMNDFTIDET 407
Query: 362 LVLAFLTAS-------------NQKLVASCSQTRPKLPSIYTGNERAILLFLFFESVVLL 408
+VL L+A+ QK+ +C Q + K F+ + V++L
Sbjct: 408 VVLTLLSATKTGISNTTQCYTRRQKIAWTCGQAKAK--------------FVQADPVIVL 453
Query: 409 VLAVLVRFCCIFWRKKKLQGQHLGNFLEKRRSLQLKKKAFDRSITELEKKVAEDAVANEV 468
AV + FCCIFWRKK+LQ L FLEKRRSL K++ + I ELE+K +EDA +NE
Sbjct: 454 -QAVAILFCCIFWRKKRLQNNGLQKFLEKRRSLHSKRRILGKKILELEQKASEDASSNEA 512
Query: 469 I---------KKSV-------VCLGRDEAAASSESKSFPPVYDAKSRSYSFQGAKKESVT 512
+ K+ V LGRDE + + S P+Y K RSYSF ++KES+T
Sbjct: 513 LGQLGEMVKAKEGVERKLYGSYSLGRDEPSLEPQGSSSLPLYHGKYRSYSFHSSQKESIT 572
Query: 513 IFHT 516
IFH+
Sbjct: 573 IFHS 576
>gi|125571107|gb|EAZ12622.1| hypothetical protein OsJ_02533 [Oryza sativa Japonica Group]
Length = 676
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 221/543 (40%), Positives = 317/543 (58%), Gaps = 63/543 (11%)
Query: 39 LSKPLIGEDGKIYACSEK-TLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAE- 96
L PLIG DG++ ACSEK +L AFE NG+IAW + L TC G +PV E+Y+VAE
Sbjct: 52 LGSPLIGHDGRLIACSEKKSLVAFERNGSIAWMVTLGHTCKEGISPV-AERDEIYLVAED 110
Query: 97 NRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMT 156
N+V+K+ K+ T++ ++VF+ + G + I G+++S SSSS+++ ++ R LFAF
Sbjct: 111 NKVIKITPKKLHTADPPSEVFFSYNATPGRSEEIIGLSISGSSSSLFLTIRNRGLFAFSL 170
Query: 157 HGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSP 216
H +L WSAGPV D L R GC CYF S PV+D+CEG++Y+SNT+G+LYSL S
Sbjct: 171 HAELQWSAGPVAD-LVSRLGCKTNISGCYFNSPPVVDRCEGTLYVSNTEGQLYSLYIKSG 229
Query: 217 YFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYA 276
+ WIQDL S DK + PGNNG LY+ +P +++V+ LD +GNI W +++GPL + +
Sbjct: 230 QYRWIQDLGSLDKVMNIVPGNNGLLYIVLPRKSIVMGLDVLTGNISWQQTIGPLSNEKIL 289
Query: 277 PVVDSNGWISVGSLDGLLYSFSPSGVLNKFSKSDTSDSVIQSSP---------YWFHLL- 326
P VDSNGWISVGSLDG LYS SP+G + +F + T SVI +SP Y +
Sbjct: 290 PPVDSNGWISVGSLDGTLYSISPNGDIRRFPERTTPGSVIHASPVLDCSGFSVYVSQTIM 349
Query: 327 ----GPSIGLKAILCLMVV----------------------GQFSSLLSKSDLQHFVLDE 360
+IG L +M G+ S LS +DL F LDE
Sbjct: 350 EAKSNQTIGDSTSLSVMKSSSTLLTLLTPANGTIHWTGNYPGELSDFLSSTDLNDFALDE 409
Query: 361 SLVLAFLTASNQKLVASCSQTRPKLPSIYTGNERAILLFLFFESVVLLVLAVLVRFCCIF 420
++VL +A+ + S +Q + +++G +R I L LFF +V +V+A++ FCCIF
Sbjct: 410 TIVLRLFSAAR---IGSTTQCYTRSMFLFSG-DRNIRLVLFFHFIV-IVIAIVNCFCCIF 464
Query: 421 WRKKKLQGQHLGNFLEKRRSLQLKKKAFDRSITELEKKVAEDAVANEVIKK--------- 471
WRKKKLQ L FLEKR SL K+K + I+ELE+K DA +NE + +
Sbjct: 465 WRKKKLQKNGLKKFLEKRHSLHTKRKILGKRISELEQKTVHDASSNEALGQLGETVNAKE 524
Query: 472 -------SVVCLGRDEAAASSESKSFPPVYDAKSRSYSFQGAKKESVTIFHTLSATSSAE 524
S LGRD + S P+ K +S+SF+ +++ES+T+F+T S TSS+E
Sbjct: 525 CIERKLCSSYSLGRDMLGLKHD--SILPLNSTKYKSHSFRNSREESITVFNTFSGTSSSE 582
Query: 525 SSS 527
+ +
Sbjct: 583 NGT 585
>gi|297597163|ref|NP_001043519.2| Os01g0605400 [Oryza sativa Japonica Group]
gi|255673441|dbj|BAF05433.2| Os01g0605400 [Oryza sativa Japonica Group]
Length = 688
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 223/556 (40%), Positives = 317/556 (57%), Gaps = 77/556 (13%)
Query: 39 LSKPLIGEDGKIYACSEK-TLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAE- 96
L PLIG DG++ ACSEK +L AFE NG+IAW + L TC G +PV E+Y+VAE
Sbjct: 52 LGSPLIGHDGRLIACSEKKSLVAFERNGSIAWMVTLGHTCKEGISPV-AERDEIYLVAED 110
Query: 97 NRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMT 156
N+V+K+ K+ T++ ++VF+ + G + I G+++S SSSS+++ ++ R LFAF
Sbjct: 111 NKVIKITPKKLHTADPPSEVFFSYNATPGRSEEIIGLSISGSSSSLFLTIRNRGLFAFSL 170
Query: 157 HGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSP 216
H +L WSAGPV D L R GC CYF S PV+D+CEG++Y+SNT+G+LYSL S
Sbjct: 171 HAELQWSAGPVAD-LVSRLGCKTNISGCYFNSPPVVDRCEGTLYVSNTEGQLYSLYIKSG 229
Query: 217 YFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYA 276
+ WIQDL S DK + PGNNG LY+ +P +++V+ LD +GNI W +++GPL + +
Sbjct: 230 QYRWIQDLGSLDKVMNIVPGNNGLLYIVLPRKSIVMGLDVLTGNISWQQTIGPLSNEKIL 289
Query: 277 PVVDSNGWISVGSLDGLLYSFSPSGVLNKFSKSDTSDSVIQSSP---------YWFHLL- 326
P VDSNGWISVGSLDG LYS SP+G + +F + T SVI +SP Y +
Sbjct: 290 PPVDSNGWISVGSLDGTLYSISPNGDIRRFPERTTPGSVIHASPVLDCSGFSVYVSQTIM 349
Query: 327 ----GPSIGLKAILCLMVV----------------------GQFSSLLSKSDLQHFVLDE 360
+IG L +M G+ S LS +DL F LDE
Sbjct: 350 EAKSNQTIGDSTSLSVMKSSSTLLTLLTPANGTIHWTGNYPGELSDFLSSTDLNDFALDE 409
Query: 361 SLVLAFLTAS----------NQKLVASCSQTRPKLPSIYTGN---ERAILLFLFFESVVL 407
++VL +A+ ++K V+ +P GN +R I L LFF +V
Sbjct: 410 TIVLRLFSAASKNWQHYAVLHEKYVSFLRTVKPNF-----GNDQGDRNIRLVLFFHFIV- 463
Query: 408 LVLAVLVRFCCIFWRKKKLQGQHLGNFLEKRRSLQLKKKAFDRSITELEKKVAEDAVANE 467
+V+A++ FCCIFWRKKKLQ L FLEKR SL K+K + I+ELE+K DA +NE
Sbjct: 464 IVIAIVNCFCCIFWRKKKLQKNGLKKFLEKRHSLHTKRKILGKRISELEQKTVHDASSNE 523
Query: 468 VIKK----------------SVVCLGRDEAAASSESKSFPPVYDAKSRSYSFQGAKKESV 511
+ + S LGRD + S P+ K +S+SF+ +++ES+
Sbjct: 524 ALGQLGETVNAKECIERKLCSSYSLGRDMLGLKHD--SILPLNSTKYKSHSFRNSREESI 581
Query: 512 TIFHTLSATSSAESSS 527
T+F+T S TSS+E+ +
Sbjct: 582 TVFNTFSGTSSSENGT 597
>gi|218188617|gb|EEC71044.1| hypothetical protein OsI_02765 [Oryza sativa Indica Group]
Length = 670
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 247/653 (37%), Positives = 350/653 (53%), Gaps = 104/653 (15%)
Query: 39 LSKPLIGEDGKIYACSEK-TLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAE- 96
L PLIG DG++ ACSEK +L AFE NG+IAW + LD TC G +PV E+Y+VAE
Sbjct: 52 LGSPLIGHDGRLIACSEKKSLVAFERNGSIAWMVTLDHTCKEGISPV-AERDEIYLVAED 110
Query: 97 NRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMT 156
N+V+K+ K+ T++ ++VF+ + G + I G+++S SSSS+++ ++ R LFAF
Sbjct: 111 NKVIKITPKKLHTADPPSEVFFSYNATPGRSEEIIGLSISGSSSSLFLTIRNRGLFAFSL 170
Query: 157 HGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSP 216
H +L WSAGPV D L R GC CYF S PV+D+CEG++Y+SNT+G+LYSL S
Sbjct: 171 HAELQWSAGPVAD-LVSRLGCKTNIAGCYFNSPPVVDRCEGTLYVSNTEGQLYSLYIKSG 229
Query: 217 YFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYA 276
+ WIQDL S DK + PGNNG LY+ +P +++V+ LD +GNI W +++GPL + +
Sbjct: 230 QYRWIQDLGSLDKVMNIVPGNNGLLYIVLPRKSIVMGLDVLTGNISWQQTIGPLSNEKIL 289
Query: 277 PVVDSNGWISVGSLDGLLYSFSPSGVLNKFSKSDTSDSVIQSSP---------YWFHLL- 326
P VDSNGWISVGSLDG LYS SP+G + +F + T SVI +SP Y +
Sbjct: 290 PPVDSNGWISVGSLDGTLYSISPNGDIRRFPERTTPGSVIHASPVLDCSGFSVYVSQTIM 349
Query: 327 ----GPSIGLKAILCLMVV----------------------GQFSSLLSKSDLQHFVLDE 360
+IG L +M G+ S LS +DL F LDE
Sbjct: 350 EAKSNQTIGDSTSLSVMKSSSTLLTLLTPANGTIHWTGNYPGELSDFLSSTDLNDFALDE 409
Query: 361 SLVLAFLTASNQKLVASCSQTRPKLPSIYTGNERAILLFLFFESVVLLVLAVLVRFCCIF 420
++VL +A+ C YT ++R I L LF V+++V V FCCIF
Sbjct: 410 TIVLRLFSAARIGSTTQC----------YTRSDRNICLVLFHFIVIVIVAIVNC-FCCIF 458
Query: 421 WRKKKLQGQHLGNFLEKRRSLQLKKKAFDRSITELEKKVAEDAVANEVIKK--------- 471
WRKKKLQ L FLEKRRSL K+K + I+ELE+K DA +NE + +
Sbjct: 459 WRKKKLQKNGLKKFLEKRRSLHTKRKILGKRISELEQKTVHDASSNEALGQLGETVNAKE 518
Query: 472 -------SVVCLGRDEAAASSESKSFPPVYDAKSRSYSFQGAKKESVTIFHTLSATSSAE 524
+ LGRD + S P+ K +S+SF+ +++ES+T+F+T S TSS+E
Sbjct: 519 CIERKLSTSYSLGRDVLGLKHD--SILPLNSTKYKSHSFRNSREESITVFNTFSGTSSSE 576
Query: 525 SSSERETSWVSEDKDQSTAKAKAKAKAKAPIKAESSSD---GDGIMDKEYRRSPSEPASS 581
+ TS S D +E SD GD ++ ++ + E S
Sbjct: 577 NG----TSSCSGD-------------------SEGCSDCSYGDEMLGTNFQSAAQEAGPS 613
Query: 582 SRGFINPLLLKQEKLQD-------KGE-VVESMSSSIRS-MLLLKRRRTLSST 625
+ +L+ E D K E ++E+M S + LKRRRT S+
Sbjct: 614 NYADTADQVLQDECASDIKSTNPHKEEYLMEAMQDKAPSKRMYLKRRRTFPSS 666
>gi|53791549|dbj|BAD52671.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 715
Score = 354 bits (909), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 242/680 (35%), Positives = 349/680 (51%), Gaps = 113/680 (16%)
Query: 39 LSKPLIGEDGKIYACSEK-TLFAFESNGTIAWSLDLDFTCNIGTAPV------------- 84
L PLIG DG++ ACSEK +L AFE NG+IAW + L TC G +PV
Sbjct: 52 LGSPLIGHDGRLIACSEKKSLVAFERNGSIAWMVTLGHTCKEGISPVAERDEFDPLLSAA 111
Query: 85 ---HGGTGEVYIVAE-NRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSS 140
H ++Y+VAE N+V+K+ K+ T++ ++VF+ + G + I G+++S SSS
Sbjct: 112 ATLHFMMDKIYLVAEDNKVIKITPKKLHTADPPSEVFFSYNATPGRSEEIIGLSISGSSS 171
Query: 141 SVYINVKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIY 200
S+++ ++ R LFAF H +L WSAGPV D L R GC CYF S PV+D+CEG++Y
Sbjct: 172 SLFLTIRNRGLFAFSLHAELQWSAGPVAD-LVSRLGCKTNISGCYFNSPPVVDRCEGTLY 230
Query: 201 ISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGN 260
+SNT+G+LYSL S + WIQDL S DK + PGNNG LY+ +P +++V+ LD +GN
Sbjct: 231 VSNTEGQLYSLYIKSGQYRWIQDLGSLDKVMNIVPGNNGLLYIVLPRKSIVMGLDVLTGN 290
Query: 261 ILWHKSVGPLGSAEYAPVVDSN-----------------GWISVGSLDGLLYSFSPSGVL 303
I W +++GPL + + P VDSN GWISVGSLDG LYS SP+G +
Sbjct: 291 ISWQQTIGPLSNEKILPPVDSNVIYFHRATLFDYCKAVTGWISVGSLDGTLYSISPNGDI 350
Query: 304 NKFSKSDTSDSVIQSSP---------YWFHLL-----GPSIGLKAILCLMVV-------- 341
+F + T SVI +SP Y + +IG L +M
Sbjct: 351 RRFPERTTPGSVIHASPVLDCSGFSVYVSQTIMEAKSNQTIGDSTSLSVMKSSSTLLTLL 410
Query: 342 --------------GQFSSLLSKSDLQHFVLDESLVL---AFLTASNQKLVASCSQTRPK 384
G+ S LS +DL F LDE++VL ++K V+ +P
Sbjct: 411 TPANGTIHWTGNYPGELSDFLSSTDLNDFALDETIVLRNWQHYAVLHEKYVSFLRTVKPN 470
Query: 385 LPSIYTGN---ERAILLFLFFESVVLLVLAVLVRFCCIFWRKKKLQGQHLGNFLEKRRSL 441
GN +R I L LFF +V +V+A++ FCCIFWRKKKLQ L FLEKR SL
Sbjct: 471 F-----GNDQGDRNIRLVLFFHFIV-IVIAIVNCFCCIFWRKKKLQKNGLKKFLEKRHSL 524
Query: 442 QLKKKAFDRSITELEKKVAEDAVANEVIKK----------------SVVCLGRDEAAASS 485
K+K + I+ELE+K DA +NE + + S LGRD
Sbjct: 525 HTKRKILGKRISELEQKTVHDASSNEALGQLGETVNAKECIERKLCSSYSLGRDMLGLKH 584
Query: 486 ESKSFPPVYDAKSRSYSFQGAKKESVTIFHTLSATSSAESSSERETSWVSEDKDQSTAKA 545
+ S P+ K +S+SF+ +++ES+T+F+T S TSS+E+ + + D S
Sbjct: 585 D--SILPLNSTKYKSHSFRNSREESITVFNTFSGTSSSENGTSSCSGESESCSDCSYGDE 642
Query: 546 KAKAKAKAPIKAESSSDGDGIMDKEYRRSPSEPASSSRGFINPLLLKQEKLQDKGEVVES 605
++ + S+ D+ ++ S+ NP K+E L E +
Sbjct: 643 MLGTNFQSAAQEAGPSNYADRADQVFQDECVSDIKST----NP--HKEEYLM---EAMHD 693
Query: 606 MSSSIRSMLLLKRRRTLSST 625
+ S R + LKRRRT S+
Sbjct: 694 KAPSKR--MYLKRRRTFPSS 711
>gi|302806974|ref|XP_002985218.1| hypothetical protein SELMODRAFT_424391 [Selaginella moellendorffii]
gi|300147046|gb|EFJ13712.1| hypothetical protein SELMODRAFT_424391 [Selaginella moellendorffii]
Length = 593
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 124/477 (25%), Positives = 214/477 (44%), Gaps = 63/477 (13%)
Query: 42 PLIGEDGKIYACSEKTLFAFESNGTIAWSLDL-DFTCNIGTAPVHGGTGEVYIVAENRVL 100
P I DG+IY C+ K L ++ + ++ W+ L TC P+ G VY+ A+N V
Sbjct: 37 PTIASDGRIYICTGKNLISYNEDMSLNWTASLRSGTCERHIPPIIDSAGRVYLAAQNNVQ 96
Query: 101 KV--DLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSV--YINVKGRALFAFMT 156
V T + Y S G+ + G+A S + +++ Y+N L+A
Sbjct: 97 IVTPKPYSYSTKKYTISFLYNFTSHGIGSKPVTGLAASQTDAAIMFYVNSGVGGLYAVTI 156
Query: 157 HGQLLWSAGPVLDQLGYRQG-------CTKTDVDCYFTSVPVIDQCEGSIYISNTQGELY 209
G WS G +++ ++Q C+ CYF P +D C+GS+YI+++ G LY
Sbjct: 157 EGTPRWSLGGIVNSSDWQQSSFDFSDFCSSNSSVCYFHYSPAVDMCDGSLYIAHSNGWLY 216
Query: 210 SLSAHSPYFNWIQDLSSFDKAFT--LTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSV 267
++S P+ W + +A +T GNNG +Y + + +V A D +G++ W V
Sbjct: 217 AISGWQPFIRWRYNFGLNREASEAGITTGNNGLVYAAVVAQEMVYAFDAQTGDVFWRVKV 276
Query: 268 GPLGSAEYAPVVDSNGWISVGSLDGLLYSFSPSGV-LNKFSKSDTSDSVIQSSPYW---- 322
GPL P VD GW+ +GS+DG LY+ SP+G + K+ + ++ S+IQ+ PY
Sbjct: 277 GPLSVLTCFPRVDLTGWVFIGSVDGCLYAISPNGQEVKKYLELESKSSIIQAPPYLECNG 336
Query: 323 -------FHLLGPSIGLKAILCLMVVGQFSSLLSKSD--------LQHFV---------- 357
+ I A + S +S+ D Q+F+
Sbjct: 337 GALYVAQVQVTSKYISYGARTLVSYTDALSVFVSQIDPFTGTLYRRQNFLPDLSTKGGCT 396
Query: 358 LDESLVLAFLTAS----------NQKLVASC--SQTRPKLPSIYTGNERAILLFLFFESV 405
D SL+LA + AS + A+C + P+LP + N++ ++ SV
Sbjct: 397 FDSSLILALVAASVSTSGPCKAGERATAATCVGNLAIPQLPDM--TNKKFKEYYISIPSV 454
Query: 406 VL-LVLAVLVRFCCIFWRKKKLQGQHLGNFLEKRRSLQLKKKAFDRSITELEKKVAE 461
+ +LAV+ F +W +K+ +H +R + L+ K + ++E ++ E
Sbjct: 455 FIGFILAVI--FVFTWWSRKRKLVKHRAAL--EREAAHLRGKYLECPSKQIEDRLFE 507
>gi|414881752|tpg|DAA58883.1| TPA: hypothetical protein ZEAMMB73_772834, partial [Zea mays]
Length = 243
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 81/122 (66%)
Query: 199 IYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSS 258
+ ISNT+G+LYSL + WIQDLSS K T+ PGN+G LY+ P +++V+ ++ S+
Sbjct: 3 LQISNTEGQLYSLYIDNRGVRWIQDLSSHGKVMTVAPGNSGCLYIVFPRKSIVVGINAST 62
Query: 259 GNILWHKSVGPLGSAEYAPVVDSNGWISVGSLDGLLYSFSPSGVLNKFSKSDTSDSVIQS 318
GNI W ++ GP+ + + P VDSNGW+S+GSLDG LYS SP G + KF + SVI
Sbjct: 63 GNISWTQNTGPISNEKNLPTVDSNGWMSIGSLDGALYSISPDGEMRKFLGETANGSVIHV 122
Query: 319 SP 320
P
Sbjct: 123 GP 124
>gi|302773455|ref|XP_002970145.1| hypothetical protein SELMODRAFT_410929 [Selaginella moellendorffii]
gi|300162656|gb|EFJ29269.1| hypothetical protein SELMODRAFT_410929 [Selaginella moellendorffii]
Length = 500
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 119/253 (47%), Gaps = 14/253 (5%)
Query: 42 PLIGEDGKIYACSEKTLFAFESNGTIAWSLDL-DFTCNIGTAPVHGGTGEVYIVAENRVL 100
P I DG+IY C+ K L ++ + ++ W+ L TC P+ G VY+ A+N V
Sbjct: 37 PTIASDGRIYICTGKNLISYNEDMSLNWTASLRSGTCEGHIPPIIDSAGRVYLAAQNNVQ 96
Query: 101 KV--DLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSV--YINVKGRALFAFMT 156
V T + Y S G+ + G+A S + +++ Y+N L+A
Sbjct: 97 IVTPKPYSYSTKKYTISFLYNFTSHGIGSKPVTGLAASQTDAAIMFYVNSGVGGLYAVTI 156
Query: 157 HGQLLWSAGPVLDQLGYRQG-------CTKTDVDCYFTSVPVIDQCEGSIYISNTQGELY 209
G WS G +++ ++Q C+ CYF P +D C+GS+YI+++ G LY
Sbjct: 157 EGTPRWSLGGIVNSSNWQQSSFDFSDFCSSNSSVCYFHYSPAVDMCDGSLYIAHSNGWLY 216
Query: 210 SLSAHSPYFNWIQDLSSFDKAFT--LTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSV 267
++S P+ W + +A +T GNNG +Y + + +V A D +G++ W V
Sbjct: 217 AISGWQPFIRWRYNFGLNREASEAGITTGNNGLVYAAVVAQEMVYAFDAQTGDVFWRVKV 276
Query: 268 GPLGSAEYAPVVD 280
GPL P VD
Sbjct: 277 GPLSVLTCFPRVD 289
>gi|358346603|ref|XP_003637356.1| hypothetical protein MTR_082s0040 [Medicago truncatula]
gi|355503291|gb|AES84494.1| hypothetical protein MTR_082s0040 [Medicago truncatula]
Length = 133
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/61 (60%), Positives = 49/61 (80%)
Query: 39 LSKPLIGEDGKIYACSEKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAENR 98
LSKPLIG+DG+IY CS+KT +FE+NGTIAWS+ +D+ CN+G APVH G G+ ++V R
Sbjct: 30 LSKPLIGDDGRIYVCSDKTFLSFETNGTIAWSIHVDYKCNVGLAPVHAGLGKSHVVLGVR 89
Query: 99 V 99
V
Sbjct: 90 V 90
>gi|333988568|ref|YP_004521175.1| PKD domain-containing protein [Methanobacterium sp. SWAN-1]
gi|333826712|gb|AEG19374.1| PKD domain containing protein [Methanobacterium sp. SWAN-1]
Length = 880
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 125/267 (46%), Gaps = 34/267 (12%)
Query: 43 LIGEDGKIYACSEKTLFAFESNGTIAWSLDLDFTCNIGTA---PVHGGTGEVYIVAE-NR 98
++G DG IYA + TLFA SNGTI W + T ++G PV G +Y +
Sbjct: 123 VVGSDGTIYALDDGTLFAVYSNGTIKWKYN---TGSVGAPYGDPVLDSNGIIYFTSNLGN 179
Query: 99 VLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGR-ALFAFMT- 156
V +D K ++ + Y TG GAI S+ ++Y+ G AL+A T
Sbjct: 180 VYAID-TKTNPNDVGAKWVYSTGKSLTSHGAI-----SSDGKTLYVGSYGAVALYALNTA 233
Query: 157 HGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISN-TQGELYSLSAHS 215
G L WS Y G + + S PVI +G+IY++ G LY+++ +
Sbjct: 234 DGTLKWS---------YSTGTSSSKGG--IQSTPVIGS-DGTIYVATYGTGILYAITDNG 281
Query: 216 PY--FNWIQDLSSFDKAFTLTPGNNGYLYV-TIPVRALVLALDTSSGNILWHKSVGPLGS 272
+ W + S ++ +NG +YV A+++S G+IL++ S+ S
Sbjct: 282 DHATVKWNTTIGSSYGNIAIS--SNGTIYVGCFKTGVNFYAVNSSDGSILYNCSLTKATS 339
Query: 273 AEYAPVVDSNGWISVGSLDGLLYSFSP 299
PV+ S+G I +G+ +G+LY+ +P
Sbjct: 340 VS-TPVIGSDGTIYIGTTNGILYALNP 365
>gi|383786386|ref|YP_005470955.1| WD40-like repeat protein [Fervidobacterium pennivorans DSM 9078]
gi|383109233|gb|AFG34836.1| WD40-like repeat protein [Fervidobacterium pennivorans DSM 9078]
Length = 390
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 129/302 (42%), Gaps = 55/302 (18%)
Query: 32 YRRSAFRL--SKPLIGEDGKIY------ACSEKTLFAFESNGTIAWSLDLDFTCNIGTAP 83
Y ++ R+ S P IG DG IY S L+A NGT+ W +I ++P
Sbjct: 64 YYQTNNRIFYSSPAIGPDGTIYIGSSDIESSTANLYAINPNGTLKWKYTT-LGDSIWSSP 122
Query: 84 VHGGTGEVYIVA-ENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSV 142
G G +Y A +N + ++ + Y TGS + AI S ++
Sbjct: 123 AIGSDGTIYFGAGDNNLYAIN------PNGTLKWKYTTGSDIWSSPAIG------SDGTI 170
Query: 143 YINVKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYIS 202
YI L+A +G L W Y G S P I +G+IY+
Sbjct: 171 YIGSDDNNLYAINPNGTLKWK---------YTTGGN-------IHSSPAI-GSDGTIYVG 213
Query: 203 NTQGELYSLSAHSPYFNW---IQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSG 259
+ G LY+++ + W I DL A G++G +YV + A++ G
Sbjct: 214 SHDGNLYAINPNGT-LKWKYTIDDLIDSSPAI----GSDGTIYVG-SWDGNLYAIN-PDG 266
Query: 260 NILWHKSVGPLGSAEYAPVVDSNGWISVGSLDGLLYSFSPSGVLN-KFSKSDTSDSVIQS 318
+ W + PL +P + S+G I +GS+DG L++ +P+G L K+ T+D I+S
Sbjct: 267 TLKWEYNT-PLIPIISSPAIGSDGTIYIGSVDGTLHAINPNGSLKWKY----TTDGFIES 321
Query: 319 SP 320
SP
Sbjct: 322 SP 323
Score = 45.8 bits (107), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 112/298 (37%), Gaps = 69/298 (23%)
Query: 40 SKPLIGEDGKIY-ACSEKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAENR 98
S P IG DG IY + L+A NGT+ W +I ++P G G +YI +++
Sbjct: 120 SSPAIGSDGTIYFGAGDNNLYAINPNGTLKWKYTTG--SDIWSSPAIGSDGTIYIGSDDN 177
Query: 99 VLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTHG 158
+L I + Y TG + AI S ++Y+ L+A +G
Sbjct: 178 ----NLYAI-NPNGTLKWKYTTGGNIHSSPAIG------SDGTIYVGSHDGNLYAINPNG 226
Query: 159 QLLWSAGPVLDQLGYRQGCTKTDVDCYFTS----------------------VPVIDQ-- 194
L W +D L +D Y S +P+I
Sbjct: 227 TLKWKY--TIDDLIDSSPAIGSDGTIYVGSWDGNLYAINPDGTLKWEYNTPLIPIISSPA 284
Query: 195 --CEGSIYISNTQGELYSLSAHSPYFNWIQDLSSF---------DKAFTL----TPGNNG 239
+G+IYI + G L++++ + W F D A T +G
Sbjct: 285 IGSDGTIYIGSVDGTLHAINPNGS-LKWKYTTDGFIESSPAIGSDGAIYFGSWDTGSESG 343
Query: 240 YLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPVVDSNGWISVGSLDGLLYSF 297
Y Y P +G + W S+G G+ +P + ++G + +G+LDG LY+
Sbjct: 344 YFYCLNP-----------NGKLKWKTSIG-YGTYS-SPAIGADGTVYIGALDGRLYAI 388
>gi|383786385|ref|YP_005470954.1| WD40-like repeat protein [Fervidobacterium pennivorans DSM 9078]
gi|383109232|gb|AFG34835.1| WD40-like repeat protein [Fervidobacterium pennivorans DSM 9078]
Length = 490
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 116/277 (41%), Gaps = 61/277 (22%)
Query: 39 LSKPLIGEDGKIYACSEK-TLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAEN 97
+S P IG DG IY SE L+A NGT+ W D I ++P G G +Y+ + +
Sbjct: 255 ISSPAIGSDGTIYVGSEDGNLYAINPNGTLKWKYTTD--GFIHSSPAIGSDGTIYVGSHD 312
Query: 98 RVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTH 157
+L I + Y TG + AI S ++Y+ + L+A +
Sbjct: 313 G----NLYAI-NPNGTLKWKYTTGYPIWSSPAIG------SDGTIYVGSWDKNLYAINPN 361
Query: 158 GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPY 217
G L W P D++ TS P I +G+IY+ + G LY+L+
Sbjct: 362 GSLKWKY-PTGDEI---------------TSSPAIGS-DGTIYVGSVDGNLYALNPDGT- 403
Query: 218 FNW-------IQ-------DLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILW 263
W IQ D S + +++L +GY Y P SG + W
Sbjct: 404 LKWKYNTYAAIQSSPAIGSDGSIYFGSYSLV-FESGYFYCLNP-----------SGTLKW 451
Query: 264 HKSVGPLGS--AEYA-PVVDSNGWISVGSLDGLLYSF 297
S+G G+ Y+ P + ++G + +G+LDG LY+
Sbjct: 452 KTSIGSSGTYYGTYSSPAIGADGTVYIGALDGRLYAI 488
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 130/293 (44%), Gaps = 44/293 (15%)
Query: 32 YRRSAFRL--SKPLIGEDGKIYACSEK-TLFAFESNGTIAWSLDLDFTCNIGTAPVHGGT 88
Y ++ R+ S P IG DG IY S+ L+A NGT+ W I ++P G
Sbjct: 166 YYQTNNRIFYSSPAIGPDGTIYIGSDDGNLYAINPNGTLKWKYTT--IIPITSSPAIGSD 223
Query: 89 GEVYIVAENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKG 148
G +Y V D L T + + Y T S I+ A+ S ++Y+ +
Sbjct: 224 GTIY------VGSCDYLCALTPNGSLKWKYTTDS----LIFISSPAIG-SDGTIYVGSED 272
Query: 149 RALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGEL 208
L+A +G L W K D + S P I +G+IY+ + G L
Sbjct: 273 GNLYAINPNGTLKW----------------KYTTDGFIHSSPAIGS-DGTIYVGSHDGNL 315
Query: 209 YSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVG 268
Y+++ + W + + + + G++G +YV + L A++ +G++ W G
Sbjct: 316 YAINPNGT-LKW-KYTTGYPIWSSPAIGSDGTIYVGSWDKNL-YAIN-PNGSLKWKYPTG 371
Query: 269 PLGSAEYAPVVDSNGWISVGSLDGLLYSFSPSGVLN-KFSKSDTSDSVIQSSP 320
+P + S+G I VGS+DG LY+ +P G L K++ + + IQSSP
Sbjct: 372 D--EITSSPAIGSDGTIYVGSVDGNLYALNPDGTLKWKYN----TYAAIQSSP 418
>gi|325959684|ref|YP_004291150.1| polymorphic outer membrane protein [Methanobacterium sp. AL-21]
gi|325331116|gb|ADZ10178.1| polymorphic outer membrane protein [Methanobacterium sp. AL-21]
Length = 2864
Score = 58.2 bits (139), Expect = 1e-05, Method: Composition-based stats.
Identities = 73/285 (25%), Positives = 118/285 (41%), Gaps = 41/285 (14%)
Query: 44 IGEDGKIY-ACSEKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAENRVLKV 102
IG DG +Y C ++ L+A +SNG++ W+ + N P G G +Y +
Sbjct: 315 IGADGTVYMGCYDRRLYALDSNGSVKWTYRAEGVLN--GPPAIGNDGTLYFGC------M 366
Query: 103 DLLKIGTSESATQVF-YGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTHGQLL 161
D + TQ + Y TG G G+ G + S +VY+ L+A +G+L
Sbjct: 367 DGKIYALNPDGTQKWNYTTG---GYIGSFTGPTIG-SDGTVYVGSSDHNLYALTPNGELK 422
Query: 162 WSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWI 221
WS + G + S V +G+IY+ +Y+L + WI
Sbjct: 423 WS---------FNTGS--------YISNSVAIANDGTIYLGADDNNVYALDPYGS-IKWI 464
Query: 222 QDLSSFDKAF-TLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPVVD 280
S ++ +L G++G +Y V AL+ G + W+ + G G P V
Sbjct: 465 YTTGSHIASYGSLCIGSDGTIYFG-DYDNKVYALN-PDGTLKWNYTTG--GIIYGTPAVS 520
Query: 281 SNGWISVGSLDGLLYSFSPSGVLNKFSKSDTSDSVIQSSPYWFHL 325
++G + V S DG LY+F + + F T+ V SP H
Sbjct: 521 ADGTLYVRSNDGKLYAFKDTAPVTDF----TATPVAGVSPLTVHF 561
Score = 57.8 bits (138), Expect = 2e-05, Method: Composition-based stats.
Identities = 72/268 (26%), Positives = 115/268 (42%), Gaps = 38/268 (14%)
Query: 39 LSKPLIGEDGKIY--ACSEKTLFAFESNGTIAWSLDLDFTCNIGT--APVHGGTGEVYIV 94
S P+IG DG IY + S +TL A+ NGT W + T T + V G G +YI
Sbjct: 225 FSSPVIGSDGTIYVPSFSTQTLIAYYPNGTQKWQFYMPSTGGFSTTASAVIGTDGTIYIG 284
Query: 95 AENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAF 154
++N VL + + TQ + T AI G + +VY+ R L+A
Sbjct: 285 SQNYVL------YALNPNGTQKWNFTAP-----NAIYGQVSIGADGTVYMGCYDRRLYAL 333
Query: 155 MTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAH 214
++G + W+ YR + P I +G++Y G++Y+L+
Sbjct: 334 DSNGSVKWT---------YR-------AEGVLNGPPAIGN-DGTLYFGCMDGKIYALNPD 376
Query: 215 SPYFNWIQDLSSFDKAFT-LTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSA 273
W + +FT T G++G +YV L AL T +G + W + G S
Sbjct: 377 GTQ-KWNYTTGGYIGSFTGPTIGSDGTVYVGSSDHNL-YAL-TPNGELKWSFNTGSYISN 433
Query: 274 EYAPVVDSNGWISVGSLDGLLYSFSPSG 301
A + ++G I +G+ D +Y+ P G
Sbjct: 434 SVA--IANDGTIYLGADDNNVYALDPYG 459
Score = 42.0 bits (97), Expect = 1.1, Method: Composition-based stats.
Identities = 49/233 (21%), Positives = 82/233 (35%), Gaps = 40/233 (17%)
Query: 12 YRSCFPFLTFASFSS-SAKVPYRRSAFRLSKPLIGEDGKIY-ACSEKTLFAFESNGTIAW 69
Y C+ +A S+ S K YR P IG DG +Y C + ++A +GT W
Sbjct: 322 YMGCYDRRLYALDSNGSVKWTYRAEGVLNGPPAIGNDGTLYFGCMDGKIYALNPDGTQKW 381
Query: 70 SLDLDFTCNIGTAPVHGGTGEVYIVAENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGA 129
+ T P G G VY+ + + L T + + TGS + A
Sbjct: 382 NYTTGGYIGSFTGPTIGSDGTVYVGSSDHNLYA-----LTPNGELKWSFNTGSYISNSVA 436
Query: 130 IAGIAVSTSSSSVYINVKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTS- 188
IA + ++Y+ ++A +G + W Y C +D YF
Sbjct: 437 IA------NDGTIYLGADDNNVYALDPYGSIKWIYTTGSHIASYGSLCIGSDGTIYFGDY 490
Query: 189 -------------------------VPVIDQCEGSIYISNTQGELYSLSAHSP 216
P + +G++Y+ + G+LY+ +P
Sbjct: 491 DNKVYALNPDGTLKWNYTTGGIIYGTPAV-SADGTLYVRSNDGKLYAFKDTAP 542
>gi|383786257|ref|YP_005470826.1| WD40-like repeat protein [Fervidobacterium pennivorans DSM 9078]
gi|383109104|gb|AFG34707.1| WD40-like repeat protein [Fervidobacterium pennivorans DSM 9078]
Length = 1436
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 120/285 (42%), Gaps = 45/285 (15%)
Query: 39 LSKPLIGEDGKIYACS-EKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAEN 97
LS P + +DG IY S + L+A +G I W + I ++P G G +YI + +
Sbjct: 1073 LSTPAVADDGTIYVGSLDGFLYAISPDGEIKWKFPTGY--EIWSSPAIGNDGTIYIGSSD 1130
Query: 98 RVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTH 157
L T + + + TG + AIA ++YI K ++A
Sbjct: 1131 SYLYAV-----TPDGKLKWKFKTGYEIWSSPAIA------PDGTIYIASKDSYVYALTPQ 1179
Query: 158 GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPY 217
G+L W + Q G + S P I +G+IY+++T LY++S
Sbjct: 1180 GKLKW-----IFQTG-----------NWIYSSPAIGN-DGTIYVASTDKHLYAISPTGK- 1221
Query: 218 FNWIQDLSSFDKAFTLTP--GNNGYLYVTIPVRALVLALDTSSGNILWH-KSVGPLGSAE 274
W + D +P G +G +YV R L + G + W K+ G + S
Sbjct: 1222 LKWKFKM---DAEVLSSPALGADGTIYVG--CRDTYLYAISPDGKLKWKFKTNGEILSC- 1275
Query: 275 YAPVVDSNGWISVGSLDGLLYSFSPSGVLNKFSKSDTSDSVIQSS 319
PV+ +G + GS D Y+ SP+G LN K T DS+ S+
Sbjct: 1276 --PVIGPDGTVYFGSTDNHFYAVSPNGRLN--WKLRTGDSITSSA 1316
Score = 42.4 bits (98), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 112/284 (39%), Gaps = 59/284 (20%)
Query: 53 CSEKTLFAFESN-GTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAENRVLKVDLLKIGTSE 111
+E F F N G + W L + I ++P G +YI +++ +L I +S+
Sbjct: 71 SNEPYNFQFPVNVGQLKWRLQIG--NYIASSPALTADGTIYIASKD----TNLYAI-SSD 123
Query: 112 SATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTHGQLLWSAGPVLDQL 171
+ + TG G + +VYI L+A G L W
Sbjct: 124 GKIKWKFKTG------GEVLSSPAVGPDGTVYIGSSDTYLYAIKPDGSLKW--------- 168
Query: 172 GYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYF------NWIQDLS 225
K + S P I + +G+IY+ + G LY+++ WI
Sbjct: 169 -------KFKTNDRIVSSPSIGK-DGTIYVGSYDGHLYAVTKDGKLLWKFKTGGWISSSP 220
Query: 226 SFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWH-KSVGPLGSAEYAPVVDSNGW 284
+ + ++ Y Y T++G ++W K+ + S+ P + ++G
Sbjct: 221 AITENAIYFGSSDDYFYAV-----------TTTGKLIWKFKANNDITSS---PAISNDGT 266
Query: 285 ISVGSLDGLLYSFSPSGVLNKFSKSDTSDSVIQSSPYWFHLLGP 328
I GSLD LYS +P G L K +T D ++ SSP ++GP
Sbjct: 267 IYFGSLDNFLYSINPDGTLK--WKFETGDDIV-SSP----VIGP 303
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 116/282 (41%), Gaps = 41/282 (14%)
Query: 40 SKPLIGEDGKIY-ACSEKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAENR 98
S P + DG +Y + +++ +G + W + I +P G +Y+ N
Sbjct: 547 SSPALARDGTMYIGTYDGFVYSLTPSGQVKWKFQTN--GRIHASPSISNDGTIYVANLNG 604
Query: 99 VLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTHG 158
L L G+ + ++ G + A+ST S+++ + ++A G
Sbjct: 605 YLYA-LCPDGSLKWNFKI---------GDAIYSSPAISTEDSTIFFGSRDGFIYAVNADG 654
Query: 159 QLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYF 218
+L W + TK ++ S P ID G+IYI + G LY+L+
Sbjct: 655 KLKW------------KFQTKGEI----LSSPAID-YNGTIYIGSKDGHLYALTPTGKLL 697
Query: 219 NWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPV 278
+ D + L G +G +++ + L TS G + W K + P G +Y+ +
Sbjct: 698 WEFKTEGEIDTSPAL--GIDGSIFIASSDKYLYAI--TSEGKLKW-KFLTPDG-IKYSAI 751
Query: 279 VDSNGWISVGSLDGLLYSFSPSGVLNKFSKSDTSDSVIQSSP 320
+ +G I +GS LY+ SP G K +D+ + SSP
Sbjct: 752 IGPDGTIYIGS--DKLYAISPDG---KLKWEFETDNPVTSSP 788
Score = 38.9 bits (89), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 116/287 (40%), Gaps = 46/287 (16%)
Query: 23 SFSSSAKVP--YRRSAFRLSKPLIGEDGKIYACSEKT-LFAFESNGTIAWSLDLDFTCN- 78
+ SS K+ ++ LS P +G DG +Y S T L+A + +G++ W F N
Sbjct: 119 AISSDGKIKWKFKTGGEVLSSPAVGPDGTVYIGSSDTYLYAIKPDGSLKWK----FKTND 174
Query: 79 -IGTAPVHGGTGEVYIVAENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVST 137
I ++P G G +Y+ + + L T + + TG + AI A+
Sbjct: 175 RIVSSPSIGKDGTIYVGSYDGHLYAV-----TKDGKLLWKFKTGGWISSSPAITENAIYF 229
Query: 138 SSSSVYINVKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEG 197
SS Y +A T G+L+W K + TS P I +G
Sbjct: 230 GSSDDY-------FYAVTTTGKLIW----------------KFKANNDITSSPAISN-DG 265
Query: 198 SIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTS 257
+IY + LYS++ W + D + G +G +Y T + L +
Sbjct: 266 TIYFGSLDNFLYSINPDGT-LKWKFETGD-DIVSSPVIGPDGTIYAT--SKDGYLYAISP 321
Query: 258 SGNILWH-KSVGPLGSAEYAPVVDSNGWISVGSLDGLLYSFSPSGVL 303
G W K+ + S+ P++ ++G I V S D +LY S +G L
Sbjct: 322 DGTQKWKFKTEKEITSS---PLIGADGKIYVSSSDNMLYCLSSNGQL 365
>gi|338731164|ref|YP_004660556.1| Pyrrolo-quinoline quinone repeat-containing protein [Thermotoga
thermarum DSM 5069]
gi|335365515|gb|AEH51460.1| Pyrrolo-quinoline quinone repeat-containing protein [Thermotoga
thermarum DSM 5069]
Length = 243
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 112/277 (40%), Gaps = 51/277 (18%)
Query: 29 KVPYRRSAFRLSKPLIGEDGKIYACSEK-TLFAFESNGTIAWSLDLDFTCNIGTAPVHGG 87
K Y+ + LS P IG+DG IY S+ ++A +GT W N+ ++P G
Sbjct: 8 KWKYKTAGRVLSSPAIGKDGMIYVGSDGGNIYALNPDGTFKWRYKT--GDNVQSSPAIGS 65
Query: 88 TGEVYIVAENRVLKVDLLKIGTSE----SATQVFYGTGSGKGGTGAIAGIAVSTSSSSVY 143
G +Y+ + +R + L GT + + V G G+ GT +Y
Sbjct: 66 DGTIYVGSWDRNIYA-LNPNGTLKWKFKTGEAVRSSPGIGQDGT--------------IY 110
Query: 144 INVKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISN 203
+ L+A G L WS Y G + S P ID +G+IY+ +
Sbjct: 111 VGSYDGCLYALNPDGTLKWS---------YPTGG-------WVRSSPAID-ADGTIYVGS 153
Query: 204 TQGELYSLSAHSPYFNW---IQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGN 260
G +Y+L+ W DL A + +G +YV R + S+G
Sbjct: 154 YDGYIYALNPDGT-LKWRFQTDDLVPSSPAIS----KDGTVYVG--ARDEYIYALNSNGT 206
Query: 261 ILWHKSVGPLGSAEYAPVVDSNGWISVGSLDGLLYSF 297
+ W G G +P + S+G I VGS DG LY+
Sbjct: 207 LKWKYKTG--GEVWSSPAISSDGTIYVGSSDGELYAI 241
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 77/182 (42%), Gaps = 32/182 (17%)
Query: 142 VYINVKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYI 201
+Y+ G ++A G W Y+ G S P I +G+IY+
Sbjct: 29 IYVGSDGGNIYALNPDGTFKWR---------YKTGDN-------VQSSPAI-GSDGTIYV 71
Query: 202 SNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPG--NNGYLYVTIPVRALVLALDTSSG 259
+ +Y+L+ + W +A +PG +G +YV + AL+ G
Sbjct: 72 GSWDRNIYALNPNGT-LKWKFKTG---EAVRSSPGIGQDGTIYVG-SYDGCLYALN-PDG 125
Query: 260 NILWHKSVGPLGSAEYAPVVDSNGWISVGSLDGLLYSFSPSGVLN-KFSKSDTSDSVIQS 318
+ W G G +P +D++G I VGS DG +Y+ +P G L +F +D ++ S
Sbjct: 126 TLKWSYPTG--GWVRSSPAIDADGTIYVGSYDGYIYALNPDGTLKWRFQ----TDDLVPS 179
Query: 319 SP 320
SP
Sbjct: 180 SP 181
>gi|20092498|ref|NP_618573.1| cell surface protein [Methanosarcina acetivorans C2A]
gi|19917763|gb|AAM07053.1| cell surface protein [Methanosarcina acetivorans C2A]
Length = 2016
Score = 54.7 bits (130), Expect = 2e-04, Method: Composition-based stats.
Identities = 68/277 (24%), Positives = 112/277 (40%), Gaps = 52/277 (18%)
Query: 37 FRLSKPLIGEDGKIYAC-SEKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVA 95
F + IG DG IY C +++ L+AF NGT+ WS + + C T P G +Y+
Sbjct: 865 FYIGGSTIGPDGTIYICNADQNLYAFNPNGTLKWSYNTEGYCYYCT-PAIDSDGVIYV-- 921
Query: 96 ENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFM 155
NR K+D + + T TG G+ AI S +Y+ + L+A
Sbjct: 922 GNRNEKLDAINPNGTLKWTS---PTGDYVYGSPAIG------SDGIIYVGCRDGNLYALF 972
Query: 156 THGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQ-GELYSLSAH 214
G L+W+ V F V +G+IY N + +LY+++++
Sbjct: 973 PDGTLMWTCA----------------VGGRFNYVSPAIAADGTIYAGNYEDNKLYAINSN 1016
Query: 215 SPYFNW-------IQDLSSFDKAFTLTPGN-NGYLYVTIPVRALVLALDTSSGNILWHKS 266
W I + + T+ G+ + LY P G + W+ +
Sbjct: 1017 G-IIKWSYETGGRIYNSPAIAADGTVYVGSYDSNLYAINP-----------DGTLKWNYT 1064
Query: 267 VGPLGSAEYAPVVDSNGWISVGSLDGLLYSFSPSGVL 303
G AP + ++G + +GS D LY+ +P G L
Sbjct: 1065 TG--AQIYGAPSIAADGTVYIGSYDHNLYAINPDGTL 1099
Score = 47.8 bits (112), Expect = 0.019, Method: Composition-based stats.
Identities = 73/310 (23%), Positives = 120/310 (38%), Gaps = 60/310 (19%)
Query: 36 AFRLSKPLIGEDGKIY--ACSEKTLFAFESNGTIAWSLDLDFTCN-IGTAPVHGGTGEVY 92
+ + + P IG DG IY +C +A NGT+ W+ + +T +P G G +Y
Sbjct: 241 SLQYNSPAIGADGTIYTGSCGTHEFYAINPNGTLKWTFRVGYTWQRFYGSPAIGTDGTIY 300
Query: 93 IVAENR-----VLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGI-----AVSTSSS-- 140
NR L D + +A +F G GT IA AV+ S+
Sbjct: 301 --TGNRDGNLYALNPDGTLKWSYATANDIFKSPTIGPDGTIYIASCDGYLHAVNPDSTFK 358
Query: 141 -------------------------SVYINVKGRALF-AFMTHGQLLWSAGPVLDQLGYR 174
++YI A+F AF G W+ Y
Sbjct: 359 WKVRWQNGNHEDVNLIGSPAIGPDGTIYIGSSSEAVFHAFNPDGTEKWN---------YT 409
Query: 175 QGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLT 234
TD ++ S P I +G++YI N +L++L+ W ++ +D+
Sbjct: 410 YTTGSTDYISFYGS-PAIGS-DGTVYIGNRDSKLFALNPDGT-LKWDFSIAQYDQILCAP 466
Query: 235 P-GNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPVVDSNGWISVGSLDGL 293
G +G LY + A+ +G + W SVG G +PV+ ++G + V + G
Sbjct: 467 AIGTDGTLYAR-SLNGNFYAI-YPNGTLKWSCSVGYSGHG--SPVIGADGAVYVINSAGR 522
Query: 294 LYSFSPSGVL 303
+ + +P G L
Sbjct: 523 ICALNPDGTL 532
Score = 40.0 bits (92), Expect = 3.5, Method: Composition-based stats.
Identities = 64/264 (24%), Positives = 96/264 (36%), Gaps = 79/264 (29%)
Query: 37 FRLSKPLIGEDGKIYACS--EKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIV 94
F P I DG IYA + + L+A SNG I WS + I +P G VY+
Sbjct: 987 FNYVSPAIAADGTIYAGNYEDNKLYAINSNGIIKWSYETG--GRIYNSPAIAADGTVYVG 1044
Query: 95 AENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAF 154
+ + +L I + + Y TG+ G +IA + +VYI L+A
Sbjct: 1045 SYDS----NLYAI-NPDGTLKWNYTTGAQIYGAPSIA------ADGTVYIGSYDHNLYAI 1093
Query: 155 MTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAH 214
G L W+ Y G + S PVI +G++YI ++ G+ Y +S
Sbjct: 1094 NPDGTLKWNY--------YADGE-------FRYSQPVIG-VDGTVYIGDSSGKFYGIS-- 1135
Query: 215 SPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAE 274
PG G + W + G
Sbjct: 1136 --------------------PG----------------------GTLKWDYTTG---GRV 1150
Query: 275 YAPV-VDSNGWISVGSLDGLLYSF 297
Y P + S+G + +GS D LY+F
Sbjct: 1151 YGPASIGSDGTLYIGSYDKKLYAF 1174
>gi|206900355|ref|YP_002250062.1| cell surface protein [Dictyoglomus thermophilum H-6-12]
gi|206739458|gb|ACI18516.1| cell surface protein [Dictyoglomus thermophilum H-6-12]
Length = 369
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 120/285 (42%), Gaps = 46/285 (16%)
Query: 40 SKPLIGEDGKIYACS-EKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAENR 98
S P IG+DG IY S + L+A +GT+ W + + ++P G G +Y+ + +
Sbjct: 40 SSPAIGQDGTIYVGSMDHYLYAINPDGTLKWKFKTGGSVH--SSPAIGQDGTIYVGSNDH 97
Query: 99 VLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTHG 158
L KI F K G ++ A+ ++Y+ L+A G
Sbjct: 98 YL----YKISPYGILKWKF------KTGRAVLSSPAIG-QDGTIYVGSMDHYLYAINPDG 146
Query: 159 QLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYF 218
L W ++ G + S P I Q +G+IY+ + LY+++ +
Sbjct: 147 TLKWK---------FKTGGS-------VHSSPAIGQ-DGTIYVGSDDHYLYAINPNGK-L 188
Query: 219 NWIQDLSSFDKAFTLTP--GNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYA 276
W + + +P G +G +YV + + A++ G + W G GS +
Sbjct: 189 KWKFETG---RPVHSSPAIGQDGTIYVG-SMDHYLYAIN-PDGTLKWKFKTG--GSVHSS 241
Query: 277 PVVDSNGWISVGSLDGLLYSFSPSGVLN-KFSKSDTSDSVIQSSP 320
P + +G I VGSLD LY+ +P G L KF + S + SSP
Sbjct: 242 PAIGQDGTIYVGSLDDYLYAINPDGKLKWKFE----TGSWVDSSP 282
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 103/273 (37%), Gaps = 60/273 (21%)
Query: 39 LSKPLIGEDGKIYACS-EKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAEN 97
LS P IG+DG IY S + L+A +GT+ W + + ++P G G +Y+ +++
Sbjct: 119 LSSPAIGQDGTIYVGSMDHYLYAINPDGTLKWKFKTGGSVH--SSPAIGQDGTIYVGSDD 176
Query: 98 RVLKV----DLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFA 153
L LK E+ V G+ GT +Y+ L+A
Sbjct: 177 HYLYAINPNGKLKW-KFETGRPVHSSPAIGQDGT--------------IYVGSMDHYLYA 221
Query: 154 FMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSA 213
G L W ++ G + S P I Q +G+IY+ + LY+++
Sbjct: 222 INPDGTLKWK---------FKTGGS-------VHSSPAIGQ-DGTIYVGSLDDYLYAINP 264
Query: 214 HSPY------FNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSV 267
+W+ + + T+ G+ +LY P L +T
Sbjct: 265 DGKLKWKFETGSWVDSSPAIGQDGTVYVGSGNHLYAINPDGTLKWKFETGY--------- 315
Query: 268 GPLGSAEYAPVVDSNGWISV--GSLDGLLYSFS 298
+ +P + +G I V GS D LY+ +
Sbjct: 316 ----CVDSSPAIGQDGTIYVGSGSYDNYLYAIN 344
Score = 38.9 bits (89), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 29 KVPYRRSAFRLSKPLIGEDGKIYACSEKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGT 88
K + ++ S P IG+DG +Y S L+A +GT+ W + + + ++P G
Sbjct: 269 KWKFETGSWVDSSPAIGQDGTVYVGSGNHLYAINPDGTLKWKFETGYCVD--SSPAIGQD 326
Query: 89 GEVYI 93
G +Y+
Sbjct: 327 GTIYV 331
>gi|432331166|ref|YP_007249309.1| PDK repeat-containing protein [Methanoregula formicicum SMSP]
gi|432137875|gb|AGB02802.1| PDK repeat-containing protein [Methanoregula formicicum SMSP]
Length = 1941
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 119/276 (43%), Gaps = 39/276 (14%)
Query: 35 SAFRLSKPLIGEDGKIYACS-EKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYI 93
++F P IG DG IY S + LFA NGT W F ++ +P G G +Y+
Sbjct: 107 TSFIYGSPAIGADGTIYVESNDYKLFAINPNGTKKWQ-SATFGTSLYGSPAIGADGTIYV 165
Query: 94 VAENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGR-ALF 152
A+ L + + TG+ + T AI S ++YI + + L+
Sbjct: 166 GAD------ALYSFDPQDGTLKWSNTTGTAQYATPAIG------SDGTIYIGSESKNTLY 213
Query: 153 AFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYI-SNTQGELYSL 211
A+ G L WS + + F + PVI +G+IYI S++ + Y+
Sbjct: 214 AYNPDGTLKWS---------------NSSANVPFRASPVI-GSDGTIYIGSSSTSKFYAF 257
Query: 212 SAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLG 271
++ W + + + G +G +YV + V A + G + W + G G
Sbjct: 258 NSDGT-LKW-SNTTGGKMYGSAAVGADGTIYVGCNDKK-VYAWN-PDGTLKWSYTTG--G 311
Query: 272 SAEYA-PVVDSNGWISVGSLDGLLYSFSPSGVLNKF 306
+A P + ++G I +GS DG +Y+ +P+G L F
Sbjct: 312 VILWASPAIGADGTIYIGSRDGKIYALNPTGTLKWF 347
>gi|260841785|ref|XP_002614091.1| hypothetical protein BRAFLDRAFT_67323 [Branchiostoma floridae]
gi|229299481|gb|EEN70100.1| hypothetical protein BRAFLDRAFT_67323 [Branchiostoma floridae]
Length = 1344
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 100/257 (38%), Gaps = 72/257 (28%)
Query: 42 PLIGEDGKIYACS-EKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAENRVL 100
PL+G DG +Y + + ++AF +G + WS DL GE++I
Sbjct: 1069 PLVGADGTVYIGTLDSVMYAFTPDGAVKWSRDL--------------GGEIWI------- 1107
Query: 101 KVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVK-GRALFAFMTHGQ 159
G G G G+ T+ ++ ++ + G ++F
Sbjct: 1108 ------------------GLAIGHDGRLVYVGVLAETNFNAFALDTQTGTPAWSFK---- 1145
Query: 160 LLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFN 219
+AGP+ + PV+ + +Y S+ +Y+L A S
Sbjct: 1146 ---AAGPIW-------------------AAPVLSRDGRYVYFSSRDSHIYTLRADSGSLV 1183
Query: 220 WIQDLSSFDKAFTLTP--GNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAP 277
D+ TP +G L+V V VLA+D G + W K +G G + +P
Sbjct: 1184 RKFDVGEDHDGIDSTPVINKDGTLFVAT-VGGSVLAVDIRRGKLKWEKVLG--GEMQSSP 1240
Query: 278 VVDSNGWISVGSLDGLL 294
+D++G++ +GS DG L
Sbjct: 1241 ALDNDGFLYIGSGDGQL 1257
Score = 45.8 bits (107), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 60/121 (49%), Gaps = 22/121 (18%)
Query: 198 SIYISNTQGELYSLSAHSPYFNWI----QDLSSF-----DKAFTLTPGNNGYLYVTIPVR 248
+I+I + G++Y+L + W +DL S DK+ +G+
Sbjct: 993 TIFIGSDDGKMYALDGETGKVKWTFTTEEDLGSSPAFSPDKSVLYFGTEDGH-------- 1044
Query: 249 ALVLALDTSSGNILWHKSVGPLGSAEYAPVVDSNGWISVGSLDGLLYSFSPSGVLNKFSK 308
V AL G+++W G GS +P+V ++G + +G+LD ++Y+F+P G + K+S+
Sbjct: 1045 --VNALRVKDGHVVWRYKTG--GSVTCSPLVGADGTVYIGTLDSVMYAFTPDGAV-KWSR 1099
Query: 309 S 309
Sbjct: 1100 D 1100
>gi|73671164|ref|YP_307179.1| hypothetical protein Mbar_A3737 [Methanosarcina barkeri str.
Fusaro]
gi|72398326|gb|AAZ72599.1| hypothetical protein Mbar_A3737 [Methanosarcina barkeri str.
Fusaro]
Length = 1682
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 118/269 (43%), Gaps = 44/269 (16%)
Query: 40 SKPLIGEDGKIYACS-EKTLFAFESNGTIAWSLDLDFTCN-IGTAPVHGGTGEVYIVAEN 97
S P IG DG IY S + L+A S+GT+ WS T N I ++P G G VYI + +
Sbjct: 196 SSPAIGTDGTIYIGSYDNKLYALNSDGTLKWSYT---TGNRISSSPAIGVDGTVYIGSYD 252
Query: 98 RVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTH 157
+ + L GT + + Y TG+ + AI + +VYI + L+
Sbjct: 253 KNIYA-LNPDGTLKWS----YTTGNRISCSPAIG------TDGTVYIGSNDKYLYGLNPD 301
Query: 158 GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPY 217
G L W G + CT P I +G+IYI + ++Y+L+ +
Sbjct: 302 GTLKWKY-----YAGAQLQCT-----------PAI-GTDGTIYIESGYRDVYALNPNGT- 343
Query: 218 FNWIQDLSSFDKAFTLTP--GNNGYLYVTIPVRALVLALDTSSGNILW-HKSVGPLGSAE 274
W + + +P G +G +Y + AL+ G + W + + G LGS
Sbjct: 344 LKWSYNGG---EGVAGSPAIGADGTIYFGTTDNKKIYALN-PEGTLRWSYTAGGNLGS-- 397
Query: 275 YAPVVDSNGWISVGSLDGLLYSFSPSGVL 303
+P + ++G I +GS D LY+ + G L
Sbjct: 398 -SPAIGADGTIYIGSSDNKLYALNSDGTL 425
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 115/272 (42%), Gaps = 50/272 (18%)
Query: 40 SKPLIGEDGKIYACS-EKTLFAFESNGTIAWSLDLDFTCN-IGTAPVHGGTGEVYIVAEN 97
S P IG DG +Y S +K ++A +GT+ WS T N I +P G G VYI + +
Sbjct: 236 SSPAIGVDGTVYIGSYDKNIYALNPDGTLKWSYT---TGNRISCSPAIGTDGTVYIGSND 292
Query: 98 RVLKVDLLKIGTSESATQVF-YGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMT 156
+ L G + T + Y G+ T AI + ++YI R ++A
Sbjct: 293 KYL------YGLNPDGTLKWKYYAGAQLQCTPAIG------TDGTIYIESGYRDVYALNP 340
Query: 157 HGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGE-LYSLSAHS 215
+G L WS Y G P I +G+IY T + +Y+L+
Sbjct: 341 NGTLKWS---------YNGGEG-------VAGSPAI-GADGTIYFGTTDNKKIYALNPEG 383
Query: 216 PYFNWIQDLSSFDKAFTL--TP--GNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLG 271
W S+ L +P G +G +Y+ L AL+ S G + W ++ G
Sbjct: 384 T-LRW-----SYTAGGNLGSSPAIGADGTIYIGSSDNKL-YALN-SDGTLKWTYAI--TG 433
Query: 272 SAEYAPVVDSNGWISVGSLDGLLYSFSPSGVL 303
+ +P + ++G I GS D LY+ +P G L
Sbjct: 434 NQIGSPAIGADGTIYFGSNDNKLYALNPDGTL 465
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 103/264 (39%), Gaps = 50/264 (18%)
Query: 42 PLIGEDGKIY-ACSEKTLFAFESNGTIAWSL----DLDFTCNIGTAP---VHGGTGEVYI 93
P IG DG +Y ++K L+ +GT+ W L T IGT + G +VY
Sbjct: 278 PAIGTDGTVYIGSNDKYLYGLNPDGTLKWKYYAGAQLQCTPAIGTDGTIYIESGYRDVYA 337
Query: 94 VAENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFA 153
+ N LK S GG G A+ + + + ++A
Sbjct: 338 LNPNGTLKW-------------------SYNGGEGVAGSPAIGADGTIYFGTTDNKKIYA 378
Query: 154 FMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSA 213
G L WS Y G S P I +G+IYI ++ +LY+L++
Sbjct: 379 LNPEGTLRWS---------YTAGGN-------LGSSPAI-GADGTIYIGSSDNKLYALNS 421
Query: 214 HSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSA 273
W ++ ++ + G +G +Y L AL+ G + W +V
Sbjct: 422 DGT-LKWTYAITG-NQIGSPAIGADGTIYFGSNDNKL-YALN-PDGTLKWTYAV--ENQI 475
Query: 274 EYAPVVDSNGWISVGSLDGLLYSF 297
+P + ++G + +GSLD LY+F
Sbjct: 476 VSSPAIGADGTLYIGSLDKKLYAF 499
>gi|339009361|ref|ZP_08641933.1| cell surface protein [Brevibacillus laterosporus LMG 15441]
gi|421872818|ref|ZP_16304435.1| PQQ enzyme repeat family protein [Brevibacillus laterosporus GI-9]
gi|338773839|gb|EGP33370.1| cell surface protein [Brevibacillus laterosporus LMG 15441]
gi|372458233|emb|CCF13984.1| PQQ enzyme repeat family protein [Brevibacillus laterosporus GI-9]
Length = 395
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 125/308 (40%), Gaps = 58/308 (18%)
Query: 39 LSKPLIGEDGKIYACS-EKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAEN 97
L+ +IG+DG IY S E LFA +G W + + T+P G G +Y+
Sbjct: 128 LTSSVIGKDGTIYTGSTEHLLFAVYPSGVKKW--EKRTVGEVTTSPALGSDGTIYV---- 181
Query: 98 RVLKVDLLKIGTSESATQVFYGTGSGK---GGTGAIAGIAVSTSSSSVYI-NVKGRALFA 153
GT + Q F GS K + + + VY+ N G+
Sbjct: 182 ----------GTGDGKLQAFNENGSEKWTFSSKAPVTTAPIISKDQVVYVGNSDGKLYAV 231
Query: 154 FMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSA 213
G+ W+ ++ PVI +G++Y+ G++Y++++
Sbjct: 232 HAASGKSKWTLA----------------LNAPMKQSPVIGN-DGTLYLGTEDGKIYAIAS 274
Query: 214 HSPYFNWIQDLSSFDKAFTLTPG--NNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLG 271
+ W +S K T +P +NG LYV + ALD+ +G W + G
Sbjct: 275 NGKE-KW---STSVGKKITSSPAIDSNGTLYVGTD-SGMFFALDSKNGKTKWSYNGGH-- 327
Query: 272 SAEYAPVVDSNGWISVGSLDGLLYSFSPSGVLNKFSKSDTSDSVIQSSPYWFHLLGPSIG 331
E AP++D+NG I + + +G+L + G N+ + + D+ + + P+IG
Sbjct: 328 QIESAPILDANGVIYMVTGNGVLRALDQKG--NRIWEYNMKDNTVSA---------PAIG 376
Query: 332 LKAILCLM 339
+ L+
Sbjct: 377 ADGTIYLV 384
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 116/287 (40%), Gaps = 50/287 (17%)
Query: 40 SKPLIGEDGKIYACSEKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAENRV 99
S P++ +G IY S F NG I W L T+ V G G +Y
Sbjct: 91 SSPVVTANGTIYVTSNGGEFYAYQNGRINWKTLLKGDL---TSSVIGKDGTIYT------ 141
Query: 100 LKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVST---SSSSVYINVKGRALFAFMT 156
G++E Y +G K + + S S ++Y+ L AF
Sbjct: 142 --------GSTEHLLFAVYPSGVKKWEKRTVGEVTTSPALGSDGTIYVGTGDGKLQAFNE 193
Query: 157 HGQLLW---SAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSA 213
+G W S PV T+ P+I + + +Y+ N+ G+LY++ A
Sbjct: 194 NGSEKWTFSSKAPV-------------------TTAPIISKDQ-VVYVGNSDGKLYAVHA 233
Query: 214 HSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSA 273
S W L++ K + GN+G LY+ + A+ S+G W SVG ++
Sbjct: 234 ASGKSKWTLALNAPMKQSPVI-GNDGTLYLGTE-DGKIYAI-ASNGKEKWSTSVGKKITS 290
Query: 274 EYAPVVDSNGWISVGSLDGLLYSFSPSGVLNKFSKSDTSDSVIQSSP 320
+P +DSNG + VG+ G+ ++ K+S + I+S+P
Sbjct: 291 --SPAIDSNGTLYVGTDSGMFFALDSKNGKTKWSYNGGHQ--IESAP 333
>gi|325959272|ref|YP_004290738.1| pyrrolo-quinoline quinone repeat-containing protein
[Methanobacterium sp. AL-21]
gi|325330704|gb|ADZ09766.1| Pyrrolo-quinoline quinone repeat-containing protein
[Methanobacterium sp. AL-21]
Length = 589
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 115/286 (40%), Gaps = 42/286 (14%)
Query: 23 SFSSSAKVPYRRSAFRLSKPLIGEDGKIYACSEKTLFAFESNGTIAWSLDLDFTCNIGTA 82
SF+S ++ Y P I +G IY L+A NGT W+ ++ I T+
Sbjct: 118 SFNSGYQIGYT--------PAIDSEGTIYLVCTGMLYALYPNGTEKWNYTPNYRDIIATS 169
Query: 83 PVHGGTGEVYI-VAENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSS 141
P G G +YI ++ +R L L + Q G+ T AI S +
Sbjct: 170 PAIGADGTIYIGISTHRYLVNSTLCALNPDGILQWNCTVGNMLVSTPAIG------SDGT 223
Query: 142 VYINVKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYI 201
+Y+ L+A +G W+ T D+ S P I +G++Y
Sbjct: 224 IYLGTFDNHLYAVYPNGTQRWN-------------FTSNDI---IVSSPAIGS-DGTLYF 266
Query: 202 SNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNI 261
+Y+L+ W + L+ + +G +Y+ + + AL T SGN+
Sbjct: 267 GCEDHNVYALNPDGS-LKW-KYLTGNITDSSPAIAKDGTIYI-VSQDKFIYAL-TPSGNL 322
Query: 262 LWHKSV----GPLGSAEYAPVVDSNGWISVGSLDGLLYSFSPSGVL 303
W + PL + +P + SNG I VGS DG Y+ +P G L
Sbjct: 323 KWKYCIYSGDHPLQMS--SPAIGSNGIIYVGSGDGCAYAINPDGSL 366
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 119/285 (41%), Gaps = 40/285 (14%)
Query: 25 SSSAKVPYRRSAFRLSKPLIGEDGKIYACS-EKTLFAFESNGTIAWSLDLDFTCNIGTAP 83
+++ K +R L P+IG D IY S +K L+A NGT+ WS + + IG P
Sbjct: 72 TNTTKWKFRTGGGILPSPVIGADDTIYIGSVDKNLYALYPNGTVKWSFNSGY--QIGYTP 129
Query: 84 VHGGTGEVYIVAENRVLKVDLLKIGTSE-SATQVFYGTGSGKGGTGAIAGIAVSTSSSSV 142
G +Y+V + L GT + + T + + GA I + S+
Sbjct: 130 AIDSEGTIYLVCTGMLYA--LYPNGTEKWNYTPNYRDIIATSPAIGADGTIYIGISTHRY 187
Query: 143 YINVKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYIS 202
+N L A G L W+ CT V S P I +G+IY+
Sbjct: 188 LVN---STLCALNPDGILQWN-------------CT---VGNMLVSTPAIGS-DGTIYLG 227
Query: 203 NTQGELYSLSAHSPYFNWIQ--DLSSFDKAFTLTP--GNNGYLYVTIPVRALVLALDTSS 258
LY++ Y N Q + +S D + +P G++G LY V AL+
Sbjct: 228 TFDNHLYAV-----YPNGTQRWNFTSNDIIVS-SPAIGSDGTLYFGCEDHN-VYALN-PD 279
Query: 259 GNILWHKSVGPLGSAEYAPVVDSNGWISVGSLDGLLYSFSPSGVL 303
G++ W G + + +P + +G I + S D +Y+ +PSG L
Sbjct: 280 GSLKWKYLTGNI--TDSSPAIAKDGTIYIVSQDKFIYALTPSGNL 322
>gi|322831769|ref|YP_004211796.1| outer membrane assembly lipoprotein YfgL [Rahnella sp. Y9602]
gi|384256885|ref|YP_005400819.1| outer membrane biogenesis protein BamB [Rahnella aquatilis HX2]
gi|321166970|gb|ADW72669.1| outer membrane assembly lipoprotein YfgL [Rahnella sp. Y9602]
gi|380752861|gb|AFE57252.1| outer membrane biogenesis protein BamB [Rahnella aquatilis HX2]
Length = 393
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 112/290 (38%), Gaps = 67/290 (23%)
Query: 10 HSYRSCFPFLTFASFSSSAKVPYRR--SAFRLSKPLIGEDGKIYACSEKTLFA--FESNG 65
H Y + +A ++ K+ ++ + LS+P++ DG + + + ES+G
Sbjct: 122 HVYVGSEKAIVYALNTTDGKIAWQTKVAGEALSRPVV-SDGLVLVHTGNGMLQGLNESDG 180
Query: 66 TIAWSLDLDFTCNIGTAPVHGGTGEVYIVAENRVLKVDLLKIGTSESATQVFYGTGSGKG 125
TI W+ +LD T + G ESA V +G
Sbjct: 181 TIQWTANLDMP----TLSLRG------------------------ESAPAVAFGA----- 207
Query: 126 GTGAIAGIAVSTSSSSVYINVKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCY 185
AI G GR M GQL+W ++ G T+ D
Sbjct: 208 ---AIVG------------GDNGRVSAVLMKEGQLIWQ-----QRISQTTGTTEIDRLSD 247
Query: 186 FTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTI 245
+ PVI +G +Y G L ++ S W +D+ S + + G++Y+ +
Sbjct: 248 VDTTPVI--VDGVVYTLAYNGNLVAMDLRSGQIMWKRDVGSVNDIIV----DAGHIYM-V 300
Query: 246 PVRALVLALDTSSGNILWHKSVGPLGSAEYAPVVDSNGWISVGSLDGLLY 295
V+ALDT G +W +S L APV+ NG+I VG +G L+
Sbjct: 301 DQDDRVMALDTQGGVSVWRQSE-LLHRNLTAPVL-YNGYIVVGDSEGYLH 348
>gi|383189017|ref|YP_005199145.1| outer membrane assembly lipoprotein YfgL [Rahnella aquatilis CIP
78.65 = ATCC 33071]
gi|371587275|gb|AEX51005.1| outer membrane assembly lipoprotein YfgL [Rahnella aquatilis CIP
78.65 = ATCC 33071]
Length = 393
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 112/290 (38%), Gaps = 67/290 (23%)
Query: 10 HSYRSCFPFLTFASFSSSAKVPYRR--SAFRLSKPLIGEDGKIYACSEKTLFA--FESNG 65
H Y + +A ++ K+ ++ + LS+P++ DG + + + ES+G
Sbjct: 122 HVYVGSEKAIVYALNTTDGKIAWQTKVAGEALSRPVV-SDGLVLVHTGNGMLQGLNESDG 180
Query: 66 TIAWSLDLDFTCNIGTAPVHGGTGEVYIVAENRVLKVDLLKIGTSESATQVFYGTGSGKG 125
TI W+ +LD T + G ESA V +G
Sbjct: 181 TIQWTANLDMP----TLSLRG------------------------ESAPAVAFGA----- 207
Query: 126 GTGAIAGIAVSTSSSSVYINVKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCY 185
AI G GR M GQL+W ++ G T+ D
Sbjct: 208 ---AIVG------------GDNGRVSAVLMKEGQLIWQ-----QRISQTTGTTEIDRLSD 247
Query: 186 FTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTI 245
+ PVI +G IY G L ++ S W +D+ S + + G++Y+ +
Sbjct: 248 VDTTPVI--VDGVIYTLAYNGNLVAMDLRSGQIMWKRDVGSVNDIIV----DAGHIYM-V 300
Query: 246 PVRALVLALDTSSGNILWHKSVGPLGSAEYAPVVDSNGWISVGSLDGLLY 295
V+ALDT G +W +S L APV+ NG++ VG +G L+
Sbjct: 301 DQDDRVMALDTQGGVSVWRQSE-LLHRNLTAPVL-YNGYLVVGDSEGYLH 348
>gi|374857088|dbj|BAL59941.1| cell surface protein [uncultured candidate division OP1 bacterium]
Length = 379
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 110/262 (41%), Gaps = 40/262 (15%)
Query: 40 SKPLIGEDGKIYACS-EKTLFAFESNGTIAWSLDLDFTCN--IGTAPVHGGTGEVYIVAE 96
S P + DGKIY S +K L+A +GT+AW FT I ++P G +Y+ +
Sbjct: 126 SSPALSTDGKIYIGSRDKNLYALNPDGTLAWQ----FTAGAEIESSPAIAADGTIYVGSW 181
Query: 97 NRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMT 156
+ L + T + T K ++ A+ + +VY+ L+A
Sbjct: 182 DGNLYT------LNPDGTLKWKYTAQNK----VVSSPAIG-ADGTVYVGSDDGNLYALKP 230
Query: 157 HGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSP 216
G L W K +V S P + +G+IY++ G L+++
Sbjct: 231 DGTLKW----------------KYEVIDTVRSSPALGP-DGTIYVAGYDGNLHAIKPDGT 273
Query: 217 YFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYA 276
W + + S + G +G +Y+ + + AL G+ LW + G G+ +
Sbjct: 274 AL-WQKGIGSIYFFSSPAVGADGVIYIGSD-KGEIYAL-KPDGSELWQRPTG--GAVFTS 328
Query: 277 PVVDSNGWISVGSLDGLLYSFS 298
P++ NG I +GS DG LY+ S
Sbjct: 329 PMIAKNGTIYIGSNDGFLYAIS 350
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 112/293 (38%), Gaps = 77/293 (26%)
Query: 33 RRSAFR-----LSKPLIGEDGKIYACS-EKTLFAFESNGTIAWSLDLDFTCNIG--TAPV 84
R+ AF+ S P +G DG IY S ++ ++A + +GT+ WS F G ++P
Sbjct: 74 RKWAFKTDGPIFSSPTLGPDGTIYVGSLDRKVYAIKPDGTLQWS----FATQDGVYSSPA 129
Query: 85 HGGTGEVYIVAENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSS---- 140
G++YI + ++ +L + + F AG + +S +
Sbjct: 130 LSTDGKIYIGSRDK----NLYALNPDGTLAWQF------------TAGAEIESSPAIAAD 173
Query: 141 -SVYINVKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSI 199
++Y+ L+ G L W K S P I +G++
Sbjct: 174 GTIYVGSWDGNLYTLNPDGTLKW----------------KYTAQNKVVSSPAI-GADGTV 216
Query: 200 YISNTQGELYSLSAHSPYFNW-IQDLSSFDKAFTLTP-------GNNGYLYVTIPVRALV 251
Y+ + G LY+L W + + + + L P G +G L+ P
Sbjct: 217 YVGSDDGNLYALKPDG-TLKWKYEVIDTVRSSPALGPDGTIYVAGYDGNLHAIKP----- 270
Query: 252 LALDTSSGNILWHKSVGPLGSAEY---APVVDSNGWISVGSLDGLLYSFSPSG 301
G LW K +G + Y +P V ++G I +GS G +Y+ P G
Sbjct: 271 ------DGTALWQKGIGSI----YFFSSPAVGADGVIYIGSDKGEIYALKPDG 313
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 75/181 (41%), Gaps = 36/181 (19%)
Query: 39 LSKPLIGEDGKIYACSEK-TLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAEN 97
+S P IG DG +Y S+ L+A + +GT+ W ++ T ++P G G +Y+ +
Sbjct: 205 VSSPAIGADGTVYVGSDDGNLYALKPDGTLKWKYEVIDTVR--SSPALGPDGTIYVAGYD 262
Query: 98 RVLKVDLLKIGTS---ESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAF 154
L + GT+ + +++ + G G I YI ++A
Sbjct: 263 GNLHA-IKPDGTALWQKGIGSIYFFSSPAVGADGVI------------YIGSDKGEIYAL 309
Query: 155 MTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAH 214
G LW + FTS P+I + G+IYI + G LY++S+
Sbjct: 310 KPDGSELWQ---------------RPTGGAVFTS-PMIAK-NGTIYIGSNDGFLYAISST 352
Query: 215 S 215
S
Sbjct: 353 S 353
>gi|206901281|ref|YP_002250061.1| cell surface protein [Dictyoglomus thermophilum H-6-12]
gi|206740384|gb|ACI19442.1| cell surface protein [Dictyoglomus thermophilum H-6-12]
Length = 467
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 109/281 (38%), Gaps = 51/281 (18%)
Query: 27 SAKVPYRRSAFRLSKPLIGEDGKIYACS-EKTLFAFESNGTIAWSLDLDFTCNIGTAPVH 85
S K Y+ F S P IG DG IY + L+A S G + W F I ++P
Sbjct: 204 SFKWKYKTENFVESSPAIGLDGTIYVGGIDGYLYAINSEGKLRWRYY--FGNPISSSPAI 261
Query: 86 GGTGEVYIVAENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYIN 145
G +Y+ E+ L + G + +++ G ++ ++YI
Sbjct: 262 DWDGTIYVGCEDGYLYA-IDSDGFFKWKYEIY----------GKVSSSPAIGPDRTIYIG 310
Query: 146 VKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQ 205
+ L+A +G L W + ++ Y S P+ID EG+IYI
Sbjct: 311 SEDGYLYAIDFNGTLKWKFN-LNSRVKY--------------SSPIIDS-EGTIYIGCED 354
Query: 206 GELYSLSA--------HSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTS 257
G LY+++ + + W D ++GYLY P
Sbjct: 355 GYLYAVNPDGSLKWKFQTDGYIWSTPAIGLD-GMIYVGSSSGYLYAINP----------- 402
Query: 258 SGNILWHKSVGPLGSAEYAPVVDSNGWISVGSLDGLLYSFS 298
G + W P G + +PV+ +G I VGS+DG LY+ +
Sbjct: 403 DGTLSWRYYCSPYG-LDSSPVIAPDGTIYVGSVDGYLYAIT 442
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 132/312 (42%), Gaps = 68/312 (21%)
Query: 40 SKPLIGEDGKIYACS-EKTLFAFESNGTIAWSLDLDFTCN-IGTAPVHGGTGEVYIVAEN 97
S P IG+DG IY S ++ ++A +G++ W + ++ + ++P G G +Y + +
Sbjct: 134 SSPAIGKDGTIYINSNDRVIYAINPDGSLKWKFETEYGPHSFISSPAIGEDGCIYTGSTD 193
Query: 98 R-VLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMT 156
V + + T+ F + G G I Y+ L+A +
Sbjct: 194 YYVYAITPYGSFKWKYKTENFVESSPAIGLDGTI------------YVGGIDGYLYAINS 241
Query: 157 HGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSP 216
G+L W Y G +S P ID +G+IY+ G LY++ +
Sbjct: 242 EGKLRWR---------YYFGNP-------ISSSPAIDW-DGTIYVGCEDGYLYAIDSDG- 283
Query: 217 YFNWIQDL-------SSFDKAFTLTPGN-NGYLYVTIPVRALVLALDTSSGNILWHKSVG 268
+F W ++ + T+ G+ +GYLY A+D + G + W ++
Sbjct: 284 FFKWKYEIYGKVSSSPAIGPDRTIYIGSEDGYLY----------AIDFN-GTLKWKFNLN 332
Query: 269 PLGSAEYA-PVVDSNGWISVGSLDGLLYSFSPSGVLN-KFSKSDTSDSVIQSSPYWFHLL 326
+Y+ P++DS G I +G DG LY+ +P G L KF +D I S+
Sbjct: 333 --SRVKYSSPIIDSEGTIYIGCEDGYLYAVNPDGSLKWKFQ----TDGYIWST------- 379
Query: 327 GPSIGLKAILCL 338
P+IGL ++ +
Sbjct: 380 -PAIGLDGMIYV 390
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 75/185 (40%), Gaps = 35/185 (18%)
Query: 40 SKPLIGEDGKIYACSEK-TLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAENR 98
S P IG D IY SE L+A + NGT+ W +L+ ++P+ G +YI E+
Sbjct: 297 SSPAIGPDRTIYIGSEDGYLYAIDFNGTLKWKFNLNSRVKY-SSPIIDSEGTIYIGCEDG 355
Query: 99 VLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTHG 158
L + G+ + Q G I +Y+ L+A G
Sbjct: 356 YLYA-VNPDGSLKWKFQT----------DGYIWSTPAIGLDGMIYVGSSSGYLYAINPDG 404
Query: 159 QLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLS------ 212
L W R C+ +D S PVI +G+IY+ + G LY+++
Sbjct: 405 TLSW-----------RYYCSPYGLD----SSPVI-APDGTIYVGSVDGYLYAITLTSKGL 448
Query: 213 AHSPY 217
A+SP+
Sbjct: 449 ANSPW 453
Score = 38.9 bits (89), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 105/275 (38%), Gaps = 54/275 (19%)
Query: 39 LSKPLIGEDGKIYACS-EKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAEN 97
+S P IGEDG IY S + ++A G+ W + + ++P G G +Y+ +
Sbjct: 176 ISSPAIGEDGCIYTGSTDYYVYAITPYGSFKWKYKTE--NFVESSPAIGLDGTIYVGGID 233
Query: 98 RVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTH 157
L SE + Y G+ + AI ++Y+ + L+A +
Sbjct: 234 GYLYAI-----NSEGKLRWRYYFGNPISSSPAI------DWDGTIYVGCEDGYLYAIDSD 282
Query: 158 GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPY 217
G W K ++ +S P I + +IYI + G LY++ +
Sbjct: 283 GFFKW----------------KYEIYGKVSSSPAIGP-DRTIYIGSEDGYLYAIDFNGT- 324
Query: 218 FNWIQDLSS--------FDKAFTLTPG-NNGYLYVTIPVRALVLALDTSSGNILWHKSVG 268
W +L+S D T+ G +GYLY P +L T +W
Sbjct: 325 LKWKFNLNSRVKYSSPIIDSEGTIYIGCEDGYLYAVNPDGSLKWKFQTDG--YIWS---- 378
Query: 269 PLGSAEYAPVVDSNGWISVGSLDGLLYSFSPSGVL 303
P + +G I VGS G LY+ +P G L
Sbjct: 379 -------TPAIGLDGMIYVGSSSGYLYAINPDGTL 406
>gi|448409196|ref|ZP_21574578.1| PKD domain-containing protein [Halosimplex carlsbadense 2-9-1]
gi|445673144|gb|ELZ25706.1| PKD domain-containing protein [Halosimplex carlsbadense 2-9-1]
Length = 2791
Score = 48.1 bits (113), Expect = 0.013, Method: Composition-based stats.
Identities = 37/111 (33%), Positives = 58/111 (52%), Gaps = 6/111 (5%)
Query: 187 TSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIP 246
TS PV+ +GS+Y S G+LY+L A + W+ SS ++ T NG +YV +
Sbjct: 2151 TSPPVV--ADGSVYFSTRGGDLYALDARTGDREWLTSPSSMERGPTRPAVLNGSVYVVVG 2208
Query: 247 VRALVLALDTSSGNILWHKSVGPLGSAEYAPVVDSNGWISVGSLDGLLYSF 297
L LA+D ++G W+ +VG +A V D+ + VG+ G L +F
Sbjct: 2209 DSDL-LAVDAATGTETWNAAVGGQVTAPPTVVDDT---VYVGNGTGTLSAF 2255
>gi|73670248|ref|YP_306263.1| cell surface protein [Methanosarcina barkeri str. Fusaro]
gi|72397410|gb|AAZ71683.1| cell surface protein [Methanosarcina barkeri str. Fusaro]
Length = 2122
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 118/277 (42%), Gaps = 42/277 (15%)
Query: 32 YRRSAFRLSKPLIGEDGKIYACS--EKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTG 89
Y + + P+IG DG IY S L+A +GT+ W+ + + G+A + G G
Sbjct: 325 YTTGSINYASPVIGSDGTIYIGSYGNSKLYAINPDGTLKWTYNTGGKIS-GSAAI-GTDG 382
Query: 90 EVYIVAENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGR 149
+YI + ++ + + GT + A Y TG G+I+G AV S ++YI
Sbjct: 383 TIYIGSYDKNIYA-INPDGTLKWA----YNTG------GSISGSAVIGSDGTIYIGSSDD 431
Query: 150 ALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELY 209
++A G L W+ Y G T S + +G+IYI + L+
Sbjct: 432 KVYAINPDGTLKWT---------YTTGKT--------ISGSLAIGKDGTIYIGSYDKYLH 474
Query: 210 SLSAHSPYFNWIQDLSSFDKAFTLTP--GNNGYLYVTIPVRALVLALDTSSGNILWHKSV 267
+L+ + W F + +P G +G +Y + + AL+ G + W S
Sbjct: 475 ALNPNGT-LKWKYKTWQF---YHGSPSIGTDGTIYTGSSGSSNLYALN-PDGTLKWRYST 529
Query: 268 GPLGSAEYAPVVDSNGWISVGSLD-GLLYSFSPSGVL 303
G + P + ++G I +GS +Y+ +P G L
Sbjct: 530 GDIYGG--TPAIATDGTIYIGSYSRSQIYALNPDGTL 564
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 74/199 (37%), Gaps = 44/199 (22%)
Query: 29 KVPYRRSAFRLSKPLIGEDGKIYACS--EKTLFAFESNGTIAWSLDLDFTCNIGTAPVHG 86
K Y+ F P IG DG IY S L+A +GT+ W T ++G
Sbjct: 483 KWKYKTWQFYHGSPSIGTDGTIYTGSSGSSNLYALNPDGTLKWRYS--------TGDIYG 534
Query: 87 GT------GEVYIVAENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSS 140
GT G +YI + +R L GT + GAI G +
Sbjct: 535 GTPAIATDGTIYIGSYSRSQIYALNPDGTLKWTYNA-----------GAIFGSMALGADG 583
Query: 141 SVYINVKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIY 200
++YI + ++A G L WS Y G T PVI +G++Y
Sbjct: 584 TIYIGSSDKKVYAINPDGTLKWS---------YTTGGT-------IYGSPVI-SADGTLY 626
Query: 201 ISNTQGELYSLSAHSPYFN 219
I + G+LY+ P N
Sbjct: 627 IGSYDGKLYAFKDVGPVAN 645
Score = 46.2 bits (108), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 124/294 (42%), Gaps = 50/294 (17%)
Query: 44 IGEDGKIYACS-EKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYI-VAENRVLK 101
IG DG IY S +K ++A +GT+ W+ + +I + V G G +YI ++++V
Sbjct: 378 IGTDGTIYIGSYDKNIYAINPDGTLKWAYNTG--GSISGSAVIGSDGTIYIGSSDDKVYA 435
Query: 102 VDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTHGQLL 161
++ + + Y TG G+ AI ++YI + L A +G L
Sbjct: 436 IN------PDGTLKWTYTTGKTISGSLAIG------KDGTIYIGSYDKYLHALNPNGTLK 483
Query: 162 WS--------AGPVLDQLGYRQGCTKTDVDCY-----------------FTSVPVIDQCE 196
W P + G + + Y + P I +
Sbjct: 484 WKYKTWQFYHGSPSIGTDGTIYTGSSGSSNLYALNPDGTLKWRYSTGDIYGGTPAI-ATD 542
Query: 197 GSIYI-SNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALD 255
G+IYI S ++ ++Y+L+ W + + + L G +G +Y+ + V A++
Sbjct: 543 GTIYIGSYSRSQIYALNPDGT-LKWTYNAGAIFGSMAL--GADGTIYIGSSDKK-VYAIN 598
Query: 256 TSSGNILWHKSVGPLGSAEYAPVVDSNGWISVGSLDGLLYSFSPSGVLNKFSKS 309
G + W + G G+ +PV+ ++G + +GS DG LY+F G + F+ +
Sbjct: 599 -PDGTLKWSYTTG--GTIYGSPVISADGTLYIGSYDGKLYAFKDVGPVANFTAT 649
>gi|328950574|ref|YP_004367909.1| PKD domain-containing protein [Marinithermus hydrothermalis DSM
14884]
gi|328450898|gb|AEB11799.1| PKD domain containing protein [Marinithermus hydrothermalis DSM
14884]
Length = 494
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 116/283 (40%), Gaps = 39/283 (13%)
Query: 39 LSKPLIGEDGKIYACS-EKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAEN 97
++ P I DG+IY S + +++A E +GT+ W L F I ++P G VYI +
Sbjct: 200 VAAPAIAPDGRIYVGSWDGSVYALEPDGTLKWKLATRF--RIDSSPALAPNGTVYIGSRG 257
Query: 98 RVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTH 157
L T + Q + TGS + A+A +VY+ ++A
Sbjct: 258 GHLYAI-----TPDGKLQWHFQTGSPIISSPALA------PDGTVYVGSMDHHVYALEPD 306
Query: 158 GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPY 217
G L W R G + S P I +G+IY+ G +Y+L
Sbjct: 307 GTLRWQV---------RLGGS-------VPSSPAIG-VDGTIYVGAMDGGVYALEPDG-T 348
Query: 218 FNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAP 277
W + L+ + G +G +Y+ + AL + G + W S + +P
Sbjct: 349 LKW-RVLTDGPVWASPALGTDGTIYIGS-YDNYLYAL-SPEGKVKWRFSA--RLNLMSSP 403
Query: 278 VVDSNGWISVGSLDGLLYSFSPSGVLNKFSKSDTSDSVIQSSP 320
V ++G I VGS G +Y+ +P+G L + T D SSP
Sbjct: 404 AVGADGTIYVGSRLGYVYAVAPNGELRWAYQ--TGDDTWTSSP 444
>gi|92114974|ref|YP_574902.1| Pyrrolo-quinoline quinone [Chromohalobacter salexigens DSM 3043]
gi|91798064|gb|ABE60203.1| WD-40 repeat-containing protein [Chromohalobacter salexigens DSM
3043]
Length = 387
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 54/118 (45%), Gaps = 11/118 (9%)
Query: 147 KGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQG 206
GR + GQ LW ++ QG T+ D PV+ Q +G +++++ G
Sbjct: 202 NGRLVTLDNRSGQPLWDM-----RVAVPQGRTEVDRLVDLDGQPVLSQ-DGRLFVTSYNG 255
Query: 207 ELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWH 264
+ +L A S W +D SS+ LTP G T+ + VLALD SG +LW
Sbjct: 256 RVMALEATSGEVIWSRDESSY-----LTPLRVGNYLFTVNEASHVLALDVDSGRVLWE 308
>gi|410692470|ref|YP_003623091.1| putative Quinonprotein methanol dehydrogenase [Thiomonas sp. 3As]
gi|294338894|emb|CAZ87231.1| putative Quinonprotein methanol dehydrogenase [Thiomonas sp. 3As]
Length = 572
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 71/169 (42%), Gaps = 20/169 (11%)
Query: 142 VYINVKGRALFAF-MTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIY 200
+++ ++AF T G+ LWS P L Q+ Y+ C D V + S+Y
Sbjct: 103 MFVTTPKDHVYAFDATTGKKLWSYDPQLPQIAYKTVC----CDVVNRGVALYKD---SLY 155
Query: 201 ISNTQGELYSLSAHSPYFNWIQDLSSFDK----AFTLTP-GNNGYLYV-----TIPVRAL 250
++ GE+ S +A NW + L FD AF+L P NG +YV R
Sbjct: 156 VAMLSGEVASFNAQDGQINWKKQL--FDPGIGYAFSLAPLAANGNIYVGSAGGEYGARGF 213
Query: 251 VLALDTSSGNILWHKSVGPLGSAEYAPVVDSNGWISVGSLDGLLYSFSP 299
+ ALD +G+ +W K P +Y + GS L ++ P
Sbjct: 214 IAALDAHTGDTVWKKYTVPSPDEKYGDTWPKGMYTHSGSPAWLTGTYDP 262
>gi|374851859|dbj|BAL54807.1| cell surface protein [uncultured candidate division OP1 bacterium]
gi|374857034|dbj|BAL59887.1| hypothetical protein HGMM_OP4C523 [uncultured candidate division OP1
bacterium]
Length = 1347
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 124/285 (43%), Gaps = 48/285 (16%)
Query: 44 IGEDGKIY-ACSEKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAENRVLKV 102
+ +D IY + L+A +G W D I ++P G G +Y+ + ++
Sbjct: 1058 LAKDRTIYFGADDGNLYALAPDGKEKWRFTADLP--IRSSPAIGPDGTLYVGSGSQP--- 1112
Query: 103 DLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVST---SSSSVYINVKGRALFAFMTHGQ 159
+ ++ G+ KG + G VS+ S++++Y+ R ++A G
Sbjct: 1113 ------SEDAKVYAIQPNGTLKGRPLDVEGGIVSSPAISTNALYVGSLDRRVYAVNLDG- 1165
Query: 160 LLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFN 219
Q +R G + S P I + +G+IYI G LY+L+
Sbjct: 1166 -------FYRQWRFRAGDS-------LQSSPAIGE-DGTIYIGADDGNLYALAPDGKE-K 1209
Query: 220 WIQDLSSFDKAFTLTP--GNNGYLYV-TIPVRALVLALDTSSGNILWH-KSVGPLGSAEY 275
W + DK + +P G++G +YV ++ R + D G WH ++ GP+ S+
Sbjct: 1210 W--RFQTEDKIVS-SPALGSDGTIYVGSLDGRLYAIKPD---GQERWHFQTEGPIYSS-- 1261
Query: 276 APVVDSNGWISVGSLDGLLYSFSPSGVLNKFSKSDTSDSVIQSSP 320
P V ++G I +GS DG LY+ + G L K+D ++SSP
Sbjct: 1262 -PAVAADGVIYIGSDDGHLYAVNADGTLRWSVKADGE---VRSSP 1302
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 75/198 (37%), Gaps = 43/198 (21%)
Query: 32 YRRSAFRL-----SKPLIGEDGKIY-ACSEKTLFAFESNGTIAWSLDLDFTCNIGTAPVH 85
YR+ FR S P IGEDG IY + L+A +G W + I ++P
Sbjct: 1167 YRQWRFRAGDSLQSSPAIGEDGTIYIGADDGNLYALAPDGKEKWRFQTE--DKIVSSPAL 1224
Query: 86 GGTGEVYIVA-ENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYI 144
G G +Y+ + + R+ + + + + T G I + +YI
Sbjct: 1225 GSDGTIYVGSLDGRLYAI------KPDGQERWHFQT------EGPIYSSPAVAADGVIYI 1272
Query: 145 NVKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNT 204
L+A G L WS D S PVI +G+IYI++
Sbjct: 1273 GSDDGHLYAVNADGTLRWS----------------VKADGEVRSSPVIG-SDGTIYIASR 1315
Query: 205 QGELYSL-----SAHSPY 217
G LY++ A SP+
Sbjct: 1316 DGNLYAIRGEAGPAQSPW 1333
>gi|423299271|ref|ZP_17277296.1| hypothetical protein HMPREF1057_00437 [Bacteroides finegoldii
CL09T03C10]
gi|408473080|gb|EKJ91602.1| hypothetical protein HMPREF1057_00437 [Bacteroides finegoldii
CL09T03C10]
Length = 657
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 115/260 (44%), Gaps = 50/260 (19%)
Query: 43 LIGEDGKIYAC----SEKTLFAFE-SNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAEN 97
L+G DG IY C S ++A +NG W++ LD IG P G +Y +
Sbjct: 358 LVGSDGTIYQCVSNASVNNVYAIAPTNGKQKWAVKLDGA--IGAFPALSEDGVLYCLTNK 415
Query: 98 RVL-KVDLLKIGTSESATQVFYGTGSGKGGTGAIA----GIAVSTSSSSVY-INVKGRAL 151
+L +D++ G+ + ++ TG GA+ G + +++++Y N KG +L
Sbjct: 416 SILYALDVVNQGSIKWQKKLDGDTG------GAVVLDKKGNVYAGTNATIYAFNSKGESL 469
Query: 152 F------------AFMTHGQLLWSA--GPVLDQLGYRQGCTK-----TDVDCYFTSVPVI 192
+ AF +G +L++ G L + G K T D YF P+
Sbjct: 470 WTLEGDNKVTERGAFALNGNMLYATLKGGGLVAVDMTNGMKKWTYPTTKGDAYF---PIA 526
Query: 193 DQCEGSIYISNTQGELYSLSAHSPYFN----WIQDLSSFDKAFTLTPGNNGYLYVTIPVR 248
D+ G++Y + E SL+ H+ N W +++ + +G LY+
Sbjct: 527 DK-NGNVYFT----EKNSLTVHAVSSNGTKIWEKNVGNKLNYSGGALSTDGILYIGTQSN 581
Query: 249 ALVLALDTSSGNILWHKSVG 268
VL LD ++GNI++ ++VG
Sbjct: 582 NKVLGLDITNGNIVFEETVG 601
>gi|301057577|ref|ZP_07198657.1| PQQ enzyme repeat protein [delta proteobacterium NaphS2]
gi|300448301|gb|EFK11986.1| PQQ enzyme repeat protein [delta proteobacterium NaphS2]
Length = 497
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 108/274 (39%), Gaps = 67/274 (24%)
Query: 44 IGEDGKIYACSEKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYI-VAENRVL-- 100
IG DG IY S L+A +++GT+ W L D + + P G G ++ +A+N +
Sbjct: 88 IGNDGTIYVGSAAGLYAIKADGTLKWHL-FDVDGAVYSCPAIGADGTIFFGLADNNAMCA 146
Query: 101 -KVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTHGQ 159
K D K + + V GK GT I V + ++ G + F G+
Sbjct: 147 VKADGTKKWCFSTGSAVSTSPAVGKDGT-----IYVQAVDNLFAVDANGNQKWVFQVSGE 201
Query: 160 LLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFN 219
S P + +G++Y+ G L SL A +P
Sbjct: 202 ---------------------------DSSPAVGP-DGTVYV----GSLLSLYAINPDGT 229
Query: 220 --WIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYA- 276
W+ D F + G +G +Y+ L S GN+ +V P GS ++A
Sbjct: 230 KKWVFDTEGFGIQSSPAVGADGTVYI----------LGGSDGNLY---AVNPDGSKKWAF 276
Query: 277 ---------PVVDSNGWISVGSLDGLLYSFSPSG 301
P + S+G + VGS D +Y+ +P+G
Sbjct: 277 KTGSGSASSPAIGSDGVVYVGSGDKNIYAVNPNG 310
Score = 42.7 bits (99), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 71/176 (40%), Gaps = 28/176 (15%)
Query: 40 SKPLIGEDGKIYACSEKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAENRV 99
S P +G DG +Y S +L+A +GT W D + I ++P G G VYI+ +
Sbjct: 203 SSPAVGPDGTVYVGSLLSLYAINPDGTKKWVFDTE-GFGIQSSPAVGADGTVYILGGS-- 259
Query: 100 LKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTHGQ 159
+L + S F TGSG + AI S VY+ + ++A +G
Sbjct: 260 -DGNLYAVNPDGSKKWAFK-TGSGSASSPAIG------SDGVVYVGSGDKNIYAVNPNGT 311
Query: 160 LLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHS 215
W+ G S P I +G++Y+ + LY+++ S
Sbjct: 312 QKWAFG----------------TGDLVASSPAI-VSDGTVYVGSNDNNLYAINGSS 350
>gi|406948057|gb|EKD78864.1| hypothetical protein ACD_41C00242G0001 [uncultured bacterium]
Length = 411
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 107/309 (34%), Gaps = 77/309 (24%)
Query: 32 YRRSAFRLSKPLIGEDGKIYACS-EKTLFAFESNGTIAWSLDLDFTCNIGTAPVH-GGTG 89
Y+ L P IG DG IY S + +A + NG + W T + P G G
Sbjct: 138 YKMGDSTLFGPTIGPDGVIYQGSWDGYFYAVKPNGKLKWKY---LTAGAVSYPASIGHNG 194
Query: 90 EVYIVAENRVLKVDLLKIGTSESATQVF-YGTGSGKGGTGAIAGIAVSTSSSSVYINVKG 148
+Y+ A + D + T + Y TGS + G+ AI ++ +Y+
Sbjct: 195 VIYLGAGDAHAGSDPYVYAFKSNGTLKWKYDTGSERSGSPAI------DANGLIYV-ASA 247
Query: 149 RALFAFMTHGQLLWSAGP-------------VLDQLGYRQGCTKTDVDCYFTSVPVIDQC 195
L+ G L W+AGP Q D D P I
Sbjct: 248 PTLYVLNKDGTLAWAAGPNTDGGGEEGGGDEPPGGDDGEQTVQAAD-DIAGIITPAI-AA 305
Query: 196 EGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALD 255
+G+IYI N++G +Y A+D
Sbjct: 306 DGTIYIGNSEGIIY-------------------------------------------AID 322
Query: 256 TSSGNILWHKSVGPLGSAEYA----PVVDSNGWISVGSLDGLLYSFSPSGVLNKFSKSDT 311
+ W + GP G Y PVVD G + G++DG +Y+ G L T
Sbjct: 323 PDTHETKWSYATGPNGEGTYGLPSFPVVDKAGAVYFGAMDGKMYALKKDGTL--LWSYAT 380
Query: 312 SDSVIQSSP 320
D++ +++P
Sbjct: 381 GDALAEAAP 389
Score = 38.9 bits (89), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 77/223 (34%), Gaps = 48/223 (21%)
Query: 17 PFLTFASFSSSAKVPYRRSAFRLSKPLIGEDGKIYACSEKTLFAFESNGTIAWSLD---- 72
P++ + + K Y + R P I +G IY S TL+ +GT+AW+
Sbjct: 209 PYVYAFKSNGTLKWKYDTGSERSGSPAIDANGLIYVASAPTLYVLNKDGTLAWAAGPNTD 268
Query: 73 -----------------------LDFTCNIGTAPVHGGTGEVYIVAENRVLKVDLLKIGT 109
D I T P G +YI + + I
Sbjct: 269 GGGEEGGGDEPPGGDDGEQTVQAADDIAGIIT-PAIAADGTIYIGNSEGI----IYAIDP 323
Query: 110 SESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTHGQLLWSAGPVLD 169
T+ Y TG GT + V + +VY ++A G LLWS
Sbjct: 324 DTHETKWSYATGPNGEGTYGLPSFPVVDKAGAVYFGAMDGKMYALKKDGTLLWS------ 377
Query: 170 QLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLS 212
Y G D + P + +G++Y ++ G +Y+++
Sbjct: 378 ---YATG------DALAEAAPAL-GADGTLYFASDDGYVYAIN 410
>gi|20090613|ref|NP_616688.1| cell surface protein [Methanosarcina acetivorans C2A]
gi|19915652|gb|AAM05168.1| cell surface protein [Methanosarcina acetivorans C2A]
Length = 3988
Score = 45.8 bits (107), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 120/274 (43%), Gaps = 55/274 (20%)
Query: 40 SKPLIGEDGKIYACS-EKTLFAFESNGTIAWSLDLDFTCN--IGTAPVHGGTGEVYIVAE 96
S P IGE+ +Y S + L+AF +GT+ WS T N G+A + G G + I +
Sbjct: 156 SSPAIGENRTVYIGSYDGKLYAFNPDGTLKWSYT---TGNQITGSATI-GADGTICIGSY 211
Query: 97 NR---VLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFA 153
+R + D + + Q+F G+ GT +Y+ + L+A
Sbjct: 212 DRRLYTINPDGTLKWSYTTGNQIFSSAAIGEDGT--------------IYVGSRDNKLYA 257
Query: 154 FMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSA 213
G L WS Y G + F+S + + +G+IYI + +L++L+
Sbjct: 258 LNPDGTLKWS---------YTTG------NQIFSSAAIGE--DGTIYIGSLDKKLHALNP 300
Query: 214 HSPYFNWIQDLSSFDKAF-TLTPGNNGYLYV-TIPVRALVLALDTSSGNILWHKSVGP-- 269
W ++ ++ + + G++G +Y+ ++ + L D G + W + G
Sbjct: 301 DGT-LKW--SYTTGNQIYGSPAIGSDGTIYIGSLDSKLHALNPD---GTLKWSYTAGNQI 354
Query: 270 LGSAEYAPVVDSNGWISVGSLDGLLYSFSPSGVL 303
GS P + S+G I +GSLD LY+ +P G L
Sbjct: 355 YGS----PAIGSDGTIYIGSLDSKLYALNPDGTL 384
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 111/268 (41%), Gaps = 53/268 (19%)
Query: 39 LSKPLIGEDGKIYACS-EKTLFAFESNGTIAWSLDLDFTCN-IGTAPVHGGTGEVYIVAE 96
S IGEDG IY S + L+A +GT+ WS T N I ++ G G +YI +
Sbjct: 235 FSSAAIGEDGTIYVGSRDNKLYALNPDGTLKWSYT---TGNQIFSSAAIGEDGTIYIGSL 291
Query: 97 NRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMT 156
++ L L GT + + Y TG+ G+ AI S ++YI L A
Sbjct: 292 DKKLHA-LNPDGTLKWS----YTTGNQIYGSPAIG------SDGTIYIGSLDSKLHALNP 340
Query: 157 HGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSP 216
G L WS Y G P I +G+IYI + +LY+L+
Sbjct: 341 DGTLKWS---------YTAGNQ-------IYGSPAI-GSDGTIYIGSLDSKLYALNPDGT 383
Query: 217 YFNWI-----QDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGP-- 269
W Q L S G++G +Y+ + + A+ T G + W + G
Sbjct: 384 -LKWSCTVGNQILGS------AALGSDGTIYIG-SYDSKIYAI-TPDGTLKWSYATGNRI 434
Query: 270 LGSAEYAPVVDSNGWISVGSLDGLLYSF 297
GS P + S+G + +GS D LY+F
Sbjct: 435 YGS----PAIGSDGTLYIGSFDSSLYAF 458
>gi|206901879|ref|YP_002250077.1| cell surface protein [Dictyoglomus thermophilum H-6-12]
gi|206740982|gb|ACI20040.1| cell surface protein [Dictyoglomus thermophilum H-6-12]
Length = 475
Score = 45.8 bits (107), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 117/275 (42%), Gaps = 57/275 (20%)
Query: 35 SAFRLSKPLIGEDGKIYACSEKTLFAFESNGTIAW--SLDLDFTCNIGTAPVHGGTGEVY 92
+ + + P IG+DG IY K L+A +G+I W SL+ ++ N+ +PV G G +Y
Sbjct: 124 TGYIYACPAIGDDGTIYVIGSK-LYAINPDGSIKWGKSLENEY-FNVQCSPVIGNDGTIY 181
Query: 93 IVAENRVLKVDLLKIGTSESATQVFYGTGSGKGGT------GAIAGIAVS-TSSSSVYIN 145
+V+ G + V G GS K T I I+++ S ++Y+
Sbjct: 182 VVSS-----------GDNAQLYAVNPGDGSTKWSTLISKLNNHIGNISLTLDSKGNIYLG 230
Query: 146 VKGRALFAFMTHGQLLW--------SAGPVLDQ-LGYRQGCTKTDVDCYFTSV------- 189
L++ ++G + W ++ PV+D+ C T F S+
Sbjct: 231 NAAGYLYSLDSNGNIRWTYTCGQGITSYPVVDKDDNIYTFCKNTGSGGVFYSINSDGNYR 290
Query: 190 -----PVIDQC--------EGSIYI---SNTQGELYSLSAHSPYFNWIQDLSSFDKAFTL 233
P+ + C EG+IY+ S T G++Y W +S + ++
Sbjct: 291 WSYSFPINEWCTAPPSIDSEGNIYLPISSGTYGKIYKYDKEGT-LQWTTQVSG-NIYYSP 348
Query: 234 TPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVG 268
N+GYLYV + + + T++G+I+ ++G
Sbjct: 349 IFDNSGYLYVCDESKN-IYKISTNNGSIVESTNIG 382
>gi|20092499|ref|NP_618574.1| cell surface protein [Methanosarcina acetivorans C2A]
gi|19917765|gb|AAM07054.1| cell surface protein [Methanosarcina acetivorans C2A]
Length = 2523
Score = 45.4 bits (106), Expect = 0.083, Method: Composition-based stats.
Identities = 70/278 (25%), Positives = 106/278 (38%), Gaps = 67/278 (24%)
Query: 42 PLIGEDGKIYACS-EKTLFAFESNGTIAWS------------LDLDFTCNIGTAPVHGG- 87
P IG DG IY + +K L+AF NGT+ W+ +D D T ++GG
Sbjct: 641 PSIGPDGTIYINNVDKKLYAFYPNGTLRWTNTTGARSYSTPAIDSDGT-------LYGGD 693
Query: 88 -TGEVYIVAENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINV 146
G++Y V + K + Y TG G+ AI S +Y
Sbjct: 694 YNGKLYAVNPDGTFKWE--------------YTTGDKFMGSPAIG------SDGIIYAAG 733
Query: 147 KGRALFAFMTHGQLLWS-AGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQ 205
LFAF + G L WS + P D S P I +G+IYI
Sbjct: 734 YNGNLFAFYSDGTLRWSYSTPGFDY-----------------STPAI-ATDGTIYIGTYN 775
Query: 206 GELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHK 265
LY+++ W + + + +G +YV L ++G + W
Sbjct: 776 SYLYAINPDGT-LKWTYQVGG-EIYNSPAIAADGTIYVGCEDNNLYAI--NANGTLKWTY 831
Query: 266 SVGPLGSAEYAPVVDSNGWISVGSLDGLLYSFSPSGVL 303
+ G AP + ++G I VG G+L + +P G L
Sbjct: 832 TTG--AQIYGAPAIGADGTIYVGDYSGILSAINPDGAL 867
Score = 45.4 bits (106), Expect = 0.094, Method: Composition-based stats.
Identities = 65/270 (24%), Positives = 106/270 (39%), Gaps = 51/270 (18%)
Query: 39 LSKPLIGEDGKIYACS-EKTLFAFESNGTIAWSLD---LDFTCNIGTAPVHGGTGEVYIV 94
+ P IG DG IYA LFAF S+GT+ WS D++ P G +YI
Sbjct: 718 MGSPAIGSDGIIYAAGYNGNLFAFYSDGTLRWSYSTPGFDYS-----TPAIATDGTIYIG 772
Query: 95 AENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAF 154
N L + GT + QV G I + ++Y+ + L+A
Sbjct: 773 TYNSYLYA-INPDGTLKWTYQV----------GGEIYNSPAIAADGTIYVGCEDNNLYAI 821
Query: 155 MTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAH 214
+G L W+ Y G P I +G+IY+ + G L +++
Sbjct: 822 NANGTLKWT---------YTTGAQ-------IYGAPAIG-ADGTIYVGDYSGILSAINPD 864
Query: 215 SPYFNWIQDLSSFDKAFTLTP--GNNGYLYV-----TIPVRALVLALDTSSGNILWHKSV 267
W + + F TP G++G +Y+ T+ + + G + W +
Sbjct: 865 GA-LKWTYEA---NYRFYSTPVIGSDGTVYIGDYSGTMNDNSGNIYAINRDGTLKWEYAT 920
Query: 268 GPLGSAEYAPVVDSNGWISVGSLDGLLYSF 297
G + S+ + S+G + +GS D LY+F
Sbjct: 921 GRIHSS---ASIGSDGTLYLGSYDNNLYAF 947
>gi|374340379|ref|YP_005097115.1| WD40-like repeat protein [Marinitoga piezophila KA3]
gi|372101913|gb|AEX85817.1| WD40-like repeat protein [Marinitoga piezophila KA3]
Length = 1460
Score = 45.4 bits (106), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 61/138 (44%), Gaps = 25/138 (18%)
Query: 190 PVIDQCEGSIYISNTQGELYSLSAHSPYFNW-------IQDLSSFDKAFTLTPGNNGYLY 242
P +D EG+IY+ + G Y +++ W I ++ N+GYLY
Sbjct: 699 PALDN-EGNIYVGDNSGYFYKINSKGILL-WRFKTEDKIWSSPTYYNGLVYFGSNDGYLY 756
Query: 243 VTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPVVDSNGWISVGSLDGLLYSFSPSGV 302
V S G ++W + ++ +P++D +G I VGS DG LY+ +P G
Sbjct: 757 VL-----------NSKGELIWKFKTQDIITS--SPLIDIDGTIYVGSWDGFLYAINPDGT 803
Query: 303 LNKFSKSDTSDSVIQSSP 320
L K++ S I SP
Sbjct: 804 LKWKFKTNNS---ISGSP 818
>gi|182414330|ref|YP_001819396.1| peptidase S8/S53 subtilisin kexin sedolisin [Opitutus terrae
PB90-1]
gi|177841544|gb|ACB75796.1| peptidase S8 and S53 subtilisin kexin sedolisin [Opitutus terrae
PB90-1]
Length = 1383
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 128/327 (39%), Gaps = 65/327 (19%)
Query: 40 SKPLIGEDGKIY---ACSEK---TLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYI 93
S P +G DG +Y ++K ++A S+GT W + IG +P G VYI
Sbjct: 685 SSPAVGADGTVYFGAGSADKHDIAVYAVASDGTRKWRFNTSGQGIIGGSPAVAADGTVYI 744
Query: 94 VAENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFA 153
+ ++ I + ++ Y T S AIA + +VYI + L+A
Sbjct: 745 GSYDK----KFYAINGATGVSRWSYTTESEILCAPAIA------ADGTVYIRDSAK-LYA 793
Query: 154 FMTHGQLLWS------------AGPV--LDQLGY------------RQGCTKT------- 180
F G L W+ PV LD Y QG
Sbjct: 794 FTPAGALKWTYTIDAVETGGTYCSPVIGLDGAIYVGSNGGKLYAVTDQGSAAALRWTFTA 853
Query: 181 DVDCYFTSVPVIDQCEGSIYISNTQGELYSLS--AHSPYFNWIQDLSSF---DKAFTLTP 235
D D Y T P +G++Y +G Y+L+ A +P W + +F D + + +P
Sbjct: 854 DGDIYTT--PAFG-ADGTLYFGTLKGAFYALTPGAAAPISKWTIKIPAFAGGDTSISSSP 910
Query: 236 G--NNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPVVDSNGWISVGSLDGL 293
+G +Y L AL+ SG W +G A +P V ++G + VG DG
Sbjct: 911 ALAPDGTIYFAAYDHKL-YALNPQSGATKWAYELGDEVRAS-SPAVAADGTVYVGVYDGF 968
Query: 294 LYSFSPSGVLNKFSKSDTSDSVIQSSP 320
+Y G L +++ S I+SSP
Sbjct: 969 VYGVRADGTL---ARTFASARRIRSSP 992
>gi|410722529|ref|ZP_11361799.1| hypothetical protein B655_2284 [Methanobacterium sp. Maddingley
MBC34]
gi|410596083|gb|EKQ50769.1| hypothetical protein B655_2284 [Methanobacterium sp. Maddingley
MBC34]
Length = 501
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Query: 41 KPLIGEDGKIY---ACSEKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAEN 97
P+IG DG IY TL+A +GT+ WSL + T TAPV G +G +Y+ N
Sbjct: 375 NPVIGNDGTIYFGEGTLPNTLYALNRDGTLKWSLPVQTT----TAPVIGASGALYVGIVN 430
Query: 98 RVLKVDLLKIGTSES 112
L DL + T S
Sbjct: 431 DGLLGDLYSLLTIRS 445
>gi|356506337|ref|XP_003521941.1| PREDICTED: acyl-CoA synthetase family member 4-like [Glycine max]
Length = 1153
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 80/174 (45%), Gaps = 29/174 (16%)
Query: 146 VKGRALFAFMTHGQLLWSAGPVLDQ----------------LGYRQGCTKTDVDC--YFT 187
+ GR + F T G++ A PV+D L Y++ C + C
Sbjct: 872 LNGRICWIFQTSGEV--KAQPVVDTCRQLIWCGSHDHNLYALDYKKHCCVYKLSCGGSIY 929
Query: 188 SVPVIDQCEGSIYISNTQGELYSLSAHSPYFN--WIQDLSSFDKAF-TLTPGNNGYLYVT 244
P ID+ G +Y+++T G + ++S + F W+ +L F +L +NG +
Sbjct: 930 GSPAIDEVRGLLYVASTGGRITAISISASPFTILWLHELEV--PVFGSLAVAHNGTVICC 987
Query: 245 IPVRALVLALDTSSGNILWHKSV-GPLGSAEYAPVVDSNGWISVGSLDGLLYSF 297
+ V VLALD +G+I+W K+ GP+ + P V + + V S G +YSF
Sbjct: 988 L-VDGHVLALD-PNGSIVWKKTTDGPIFAGPCIPSVLPHE-VLVCSRSGGVYSF 1038
>gi|441504679|ref|ZP_20986672.1| Outer membrane protein YfgL [Photobacterium sp. AK15]
gi|441427778|gb|ELR65247.1| Outer membrane protein YfgL [Photobacterium sp. AK15]
Length = 386
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 71/169 (42%), Gaps = 22/169 (13%)
Query: 135 VSTSSSSVYINVKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQ 194
VS S + GR A M +GQ+LW +G +G T+ D + PVI
Sbjct: 193 VSISGGIFWGQANGRLAGALMNNGQMLWQ-----QPIGTPKGATEIDRLVDVDAAPVI-- 245
Query: 195 CEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLAL 254
+Y + G L S+ + W + SS F + G+ YL + + V+A+
Sbjct: 246 AGERLYAISYNGNLVSIELRTGQVAWKRSYSSATD-FVID-GSQLYL---VTDKDHVVAV 300
Query: 255 DTSSGNILWHKSVGPLGSAEY----APVVDSNGWISVGSLDGLLYSFSP 299
D SG LW S EY AP V NG++ VG +G L+ P
Sbjct: 301 DIRSGTELWQNQ-----SLEYRLLSAPSV-LNGYVVVGDSEGYLHWLDP 343
>gi|380694705|ref|ZP_09859564.1| cell surface protein [Bacteroides faecis MAJ27]
Length = 655
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 107/255 (41%), Gaps = 42/255 (16%)
Query: 43 LIGEDGKIYAC----SEKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAE-- 96
L+G DG IY C S K ++A NGT WSL LD IG P G +Y +
Sbjct: 358 LVGSDGTIYQCVRDASIKNVYAINPNGTQKWSLQLD--GPIGAFPALSADGVLYCLTNKS 415
Query: 97 --------NRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVY----I 144
N +K GT+ SA + G + AI A S + ++ +
Sbjct: 416 TLYALDVANGAIKWQQSLDGTTGSAVAIDRNGNIYAGTSEAI--YAFSANKEELWKLSGV 473
Query: 145 NVKGRALFAFMTHGQLLWS-----AGPVLDQLGYRQGCTK-----TDVDCYFTSVPVIDQ 194
NV + FA +G L++ AG V + G K T D YF P++D+
Sbjct: 474 NVTEQGTFAL--NGNTLYATLKSKAGLVAVDI--TNGTKKWTYPTTGGDAYF---PIVDK 526
Query: 195 CEGSIYISNTQGE-LYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLA 253
+G +Y + + +Y++ A W++ +++ +G LY+ +
Sbjct: 527 -KGVVYFTEKGSQTVYAVDADGSKV-WVKKVNNNLNYSGAALSTDGVLYIGTQSNNKIFG 584
Query: 254 LDTSSGNILWHKSVG 268
L+T+ G+ ++ +SVG
Sbjct: 585 LNTADGSTVYEESVG 599
>gi|91203065|emb|CAJ72704.1| similar to beta-propeller protein YxaL [Candidatus Kuenenia
stuttgartiensis]
Length = 381
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 68/135 (50%), Gaps = 13/135 (9%)
Query: 188 SVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTP--GNNGYLYVTI 245
S PVI + EG+IYI++T G L +++ P N + S D+ F TP G NG +Y
Sbjct: 77 SSPVISK-EGNIYITSTDGNLLAIA---PEGNVLWAFKSEDEIFA-TPAVGENGDIYFG- 130
Query: 246 PVRALVLALDTSSGNILWHKSVGPLGSAEYAPVVDSNGWISVGSLDGLLYSFSPSGVLNK 305
V + +D + G + W + S +PV+D+ G I G+ DG LY+ G L
Sbjct: 131 AVDGNLYTVD-AYGKMKWKFNTNT--SIHSSPVIDAEGNIYFGAYDGNLYAVDAQGKL-- 185
Query: 306 FSKSDTSDSVIQSSP 320
K T ++I SSP
Sbjct: 186 LWKFKTGSAIIASSP 200
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 110/267 (41%), Gaps = 39/267 (14%)
Query: 39 LSKPLIGEDGKIY-ACSEKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAEN 97
+ P +GE+G IY + L+ ++ G + W + + +I ++PV G +Y A +
Sbjct: 116 FATPAVGENGDIYFGAVDGNLYTVDAYGKMKWKFNTN--TSIHSSPVIDAEGNIYFGAYD 173
Query: 98 RVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTH 157
+L + F K G+ IA ++++Y+ + L+A
Sbjct: 174 G----NLYAVDAQGKLLWKF------KTGSAIIASSPAIGQNNTIYVGSWDKHLYAIKRD 223
Query: 158 GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPY 217
G L+W +R T+ +D + P I IYI++ G+LY+++
Sbjct: 224 GGLMWK---------FR---TEGKID----ASPAIGNS--VIYIADVTGKLYAVNLDGT- 264
Query: 218 FNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWH-KSVGPLGSAEYA 276
W DL S + + + + I + + G++ W K+ P+ +
Sbjct: 265 LKWGFDLDSRTHSSPVLCSDG---TICIGTHDGGVCAVKNDGSLKWKFKTNKPVTAT--- 318
Query: 277 PVVDSNGWISVGSLDGLLYSFSPSGVL 303
P VD+ I VGS DG LY+ + G L
Sbjct: 319 PTVDAKDIIYVGSWDGNLYAINKDGSL 345
>gi|114567258|ref|YP_754412.1| hypothetical protein Swol_1743 [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
gi|114338193|gb|ABI69041.1| hypothetical protein Swol_1743 [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
Length = 407
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 64/146 (43%), Gaps = 17/146 (11%)
Query: 186 FTSVPVIDQCEGSIYISNTQGELYSL---SAHSPYFNWIQDLSSFDKAFTLTPGNNGYLY 242
+ SV +GS Q ++Y S +SP W S ++ GN+ LY
Sbjct: 253 YASVNFKKAAQGSKGGKLNQAKVYCFKNSSGNSPI--WSNSFSVANQVTAPVLGNSKTLY 310
Query: 243 VTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPVVDSNGWISVGSLDGLLYSFSPSGV 302
T + + ALDT G +LW PL P V NG+I GS DG L++ PSG
Sbjct: 311 FTGGNK--LYALDTEKGKVLWDT---PLLKLVSTPAVSQNGYIYGGSSDGDLFAVKPSGR 365
Query: 303 LNKFSKSDTSDSVIQSSPYWFHLLGP 328
L F + D ++ +P L+GP
Sbjct: 366 LAWFRQ---LDGAVERAP----LIGP 384
>gi|255566040|ref|XP_002524008.1| AMP dependent ligase, putative [Ricinus communis]
gi|223536735|gb|EEF38376.1| AMP dependent ligase, putative [Ricinus communis]
Length = 1144
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 18/153 (11%)
Query: 156 THGQLLW--SAGPVLDQLGYRQGCTKTDVDC---YFTSVPVIDQCEGSIYISNTQGELYS 210
H Q++W S L L YR C + C F S P ID+ G +Y+++T G + +
Sbjct: 883 VHRQIIWCGSHDNYLYALDYRNYCCIYKLLCGGSVFGS-PAIDEVHGRLYVASTSGRVTA 941
Query: 211 LSAHSPYFN--WIQDLS--SFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWH-K 265
+S + F+ W ++L F +P NGY+ + V V+ALD SSG+I+W +
Sbjct: 942 ISVKALPFHTLWQRELEVPVFGSLSVCSP--NGYVICCL-VDGNVVALD-SSGSIVWRCR 997
Query: 266 SVGPL-GSAEYAPVVDSNGWISVGSLDGLLYSF 297
+ GP+ A + V+ S + + S +G +YSF
Sbjct: 998 TGGPVFAGACTSYVLPSQ--VLICSRNGSIYSF 1028
>gi|432962502|ref|XP_004086701.1| PREDICTED: plectin-like [Oryzias latipes]
Length = 4650
Score = 44.7 bits (104), Expect = 0.17, Method: Composition-based stats.
Identities = 48/197 (24%), Positives = 87/197 (44%), Gaps = 25/197 (12%)
Query: 422 RKKKLQGQHLGNFLEKRRSLQLK----KKAFDRSITELEKKVAEDAVANEVIKKSVVCLG 477
R+K+L + LE +R +Q + + + RS+ K+ E E +K V L
Sbjct: 2460 RQKELAQEQAQKLLEDKRQMQQRLEEETEEYHRSLQAERKRQLEITTEAEKLKLQVSQLS 2519
Query: 478 RDEAAASSESKSFPPVYDA-KSRSYSFQGAKKESVTI-----FHTLSATSSAESSSERET 531
+A A E+K F DA +R + + A KE +T+ F L++T A+ + T
Sbjct: 2520 EAQAKAEDEAKKFKKQADAVAARLHETEIATKEKLTVVQRLEFERLNSTKEADDLRKAIT 2579
Query: 532 SWVSEDKDQSTAKAKAKAKAKAPIKAESSSDGDGIMDKEYRRSPSEPASSSRGFINP--- 588
SE KA+ K +A+ E + + D + ++ E + F+
Sbjct: 2580 DLESE-------KARLKQEAE-----ELQNKSKEMADAQQKQMEHEKTMLQQTFLTEKEM 2627
Query: 589 LLLKQEKLQDKGEVVES 605
LL K+++++D+ +ES
Sbjct: 2628 LLRKEKQIEDEKRRLES 2644
>gi|395646288|ref|ZP_10434148.1| parallel beta-helix repeat protein [Methanofollis liminatans DSM
4140]
gi|395443028|gb|EJG07785.1| parallel beta-helix repeat protein [Methanofollis liminatans DSM
4140]
Length = 2271
Score = 44.3 bits (103), Expect = 0.22, Method: Composition-based stats.
Identities = 63/276 (22%), Positives = 107/276 (38%), Gaps = 83/276 (30%)
Query: 32 YRRSAFRLSKPLIGEDGKIYACSE-KTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGE 90
Y+ S+F + +P++ DG +YA S K +A NGT+ WS TAP
Sbjct: 746 YKASSFFMVQPVVDADGTVYAGSRNKIFYALHPNGTLKWSY---------TAP------- 789
Query: 91 VYIVAENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRA 150
Q++ G GT VY +
Sbjct: 790 -----------------------QQIYSAAAIGSDGT--------------VYFGCRYGM 812
Query: 151 LFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYS 210
++A +G + W+ T DV ++ P I +G+IY + ++Y+
Sbjct: 813 IYALNPNGTVKWTF------------TTGGDV----SAAPAIGT-DGTIYAGSADTKIYA 855
Query: 211 LSAH-SPYFNWIQDLSSFDKAFTLTP--GNNGYLYVTIPVRALVLALDTSSGNILWHKSV 267
L+ + +N+ + + T P G +G +Y T + + AL+ G + W +
Sbjct: 856 LNPDGTEKWNF-----TTGGSVTAAPAIGLDGTIY-TGSADSSLYALN-PDGTLKWSYAT 908
Query: 268 GPLGSAEYAPVVDSNGWISVGSLDGLLYSFSPSGVL 303
G G+ +YAP + S+G I S LY+ +P G L
Sbjct: 909 G--GAVKYAPAIGSDGTIYTASAGCSLYAVNPDGTL 942
>gi|222634837|gb|EEE64969.1| hypothetical protein OsJ_19865 [Oryza sativa Japonica Group]
Length = 1168
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 74/166 (44%), Gaps = 13/166 (7%)
Query: 146 VKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDC--YFTSVPVIDQCEGSIYISN 203
V G LF H + S L L Y+ C + C P ID IY+++
Sbjct: 905 VAGVYLFLKKEHPKRCGSYDHHLYALNYKDRCCTYKISCGGSIYGSPAIDMTHNMIYVAS 964
Query: 204 TQGELYSLSAHSPYFNWIQDLSSFDKAF-TLTPGNNGYLYVTIPVRALVLALDTSSGNIL 262
T G + ++S F I + F +L ++G + V LV+AL+ S G+++
Sbjct: 965 TSGLVTAISLEVSSFKIIWQYEAGAPIFGSLAIHHHGGKVICCLVNGLVIALN-SHGSVV 1023
Query: 263 WHKSV-GPLGSAEYAPVVDSNGW---ISVGSLDGLLYSF-SPSGVL 303
W SV GP+ +A S+G + + S DG LYSF + SG L
Sbjct: 1024 WKASVGGPI----FAGACLSSGLPTQVLIPSRDGRLYSFDTTSGAL 1065
>gi|218200974|gb|EEC83401.1| hypothetical protein OsI_28845 [Oryza sativa Indica Group]
Length = 1170
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 74/166 (44%), Gaps = 13/166 (7%)
Query: 146 VKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDC--YFTSVPVIDQCEGSIYISN 203
V G LF H + S L L Y+ C + C P ID IY+++
Sbjct: 907 VAGVYLFLKKEHPKRCGSYDHHLYALNYKDRCCTYKISCGGSIYGSPAIDMTHNMIYVAS 966
Query: 204 TQGELYSLSAHSPYFNWIQDLSSFDKAF-TLTPGNNGYLYVTIPVRALVLALDTSSGNIL 262
T G + ++S F I + F +L ++G + V LV+AL+ S G+++
Sbjct: 967 TSGLVTAISLEVSSFKIIWQYEAGAPIFGSLAIHHHGGKVICCLVNGLVIALN-SHGSVV 1025
Query: 263 WHKSV-GPLGSAEYAPVVDSNGW---ISVGSLDGLLYSF-SPSGVL 303
W SV GP+ +A S+G + + S DG LYSF + SG L
Sbjct: 1026 WKASVGGPI----FAGACLSSGLPTQVLIPSRDGRLYSFDTTSGAL 1067
>gi|430757446|ref|YP_007207506.1| hypothetical protein A7A1_1954 [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|430021966|gb|AGA22572.1| Hypothetical protein YxaL [Bacillus subtilis subsp. subtilis str.
BSP1]
Length = 410
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 115/276 (41%), Gaps = 56/276 (20%)
Query: 43 LIGEDGKIYACS-EKTLFAFESNGTIAWSLDLDFTCNIG----TAPVHGGTGEVYIVAEN 97
+I DG +Y S + + AF +G++ W T N+G +PV G G +Y+ + +
Sbjct: 103 VIDGDGTVYLHSRDGEMKAFNPDGSVKW-----VTGNLGKTYTQSPVLGTNGVIYLASYD 157
Query: 98 RVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTH 157
+ K+ + T E T V +G + V S ++Y + + A
Sbjct: 158 K--KIYFIDKETGEILTTVPL--------SGGPSSETVIGSDGTLYFSTLDNYVHAIKPT 207
Query: 158 GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPY 217
+ W+ K + +SVPV+ G++Y+ Y++++ +
Sbjct: 208 SKSTWTE------------RWKLKTNGVVSSVPVL-ASNGTVYVGTYNNVFYAINSGTGQ 254
Query: 218 FNWIQDLSS-------FDKAFTLTPGN-NGYLYVTIPVRALVLALDTSSGNILWHKSVGP 269
W + S+ DK T+ GN +G LY TS+G++ W P
Sbjct: 255 VKWSRTTSNAFKGYPVIDKDGTVYAGNQDGQLYAY-----------TSTGSLKW---TFP 300
Query: 270 L-GSAEYAPVVDSNGWISVGSLDGLLYSFSPSGVLN 304
L G + +P +D NG I +GS G L+S S +G +N
Sbjct: 301 LNGFSSSSPAIDHNGNIYIGSGSGELFSISKNGDMN 336
>gi|29345602|ref|NP_809105.1| cell surface protein [Bacteroides thetaiotaomicron VPI-5482]
gi|383123229|ref|ZP_09943912.1| hypothetical protein BSIG_0028 [Bacteroides sp. 1_1_6]
gi|29337494|gb|AAO75299.1| cell surface protein [Bacteroides thetaiotaomicron VPI-5482]
gi|251841675|gb|EES69755.1| hypothetical protein BSIG_0028 [Bacteroides sp. 1_1_6]
Length = 655
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 107/255 (41%), Gaps = 42/255 (16%)
Query: 43 LIGEDGKIYAC----SEKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAE-- 96
L+G DG IY C S K ++A NGT WSL LD IG P G +Y +
Sbjct: 358 LVGSDGTIYQCVRDASIKNVYAINPNGTQKWSLQLD--GPIGAFPALSADGVLYCLTNKS 415
Query: 97 --------NRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVY----I 144
N +K GT+ SA + G + AI A S + ++ +
Sbjct: 416 TLYALDVANGAIKWQQSLDGTTGSAVAIDRNGHIYAGTSEAI--YAFSANKEELWKLSGV 473
Query: 145 NVKGRALFAFMTHGQLLWS-----AGPVLDQLGYRQGCTK-----TDVDCYFTSVPVIDQ 194
NV + FA +G L++ AG V + G K T D YF P++D+
Sbjct: 474 NVTEQGTFAL--NGNTLYATLKSKAGLVAVDI--TNGTKKWTYPTTGGDAYF---PIVDK 526
Query: 195 CEGSIYISNTQGE-LYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLA 253
+G +Y + + +Y++ A W++ +++ +G LY+ +
Sbjct: 527 -KGVVYFTEKGSQTVYAVDADGSKV-WVKKVNNNLNYSGAALSTDGVLYIGTQSNNKIFG 584
Query: 254 LDTSSGNILWHKSVG 268
L+T+ G+ ++ +SVG
Sbjct: 585 LNTADGSTVYEESVG 599
>gi|448362224|ref|ZP_21550836.1| pyrrolo-quinoline quinone [Natrialba asiatica DSM 12278]
gi|445649094|gb|ELZ02038.1| pyrrolo-quinoline quinone [Natrialba asiatica DSM 12278]
Length = 412
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 114/288 (39%), Gaps = 56/288 (19%)
Query: 47 DGKIYACSEK-TLFAFE-SNGTIAWSLDLDFTCNIGTAPVHG------GTGEVYIVAENR 98
DG +Y S+ +L+A S+GT WS + D + A V G G G VY + +
Sbjct: 99 DGTVYVGSDDGSLYAISASSGTERWSFETDDSVTSSPAVVDGTVYVGSGDGSVYAIPADA 158
Query: 99 VLKVDL-LKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMT- 156
D +I T GA+AG + + + VY+ L+A T
Sbjct: 159 NSTPDAEWRIETE-----------------GAVAG-SPTVADGVVYVGSSDNHLYAISTA 200
Query: 157 HGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSP 216
G+ LW + + D P + +G++Y+ + G LY++ S
Sbjct: 201 DGEKLW----------------RFETDETILRAPAV--VDGTVYVGSNDGSLYAIDTDSE 242
Query: 217 YFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYA 276
W L + D+ + NG +YV + A++ SG I W + GS +
Sbjct: 243 TERWR--LETDDRIQSRPAVANGVVYVG-SNDNTIYAVEADSGEIRWTFQI--EGSVTAS 297
Query: 277 PVVDSNGWISVGSLDGLLYSFSPSGVLNKFSKSDTSDSVIQSSPYWFH 324
P V + + VG D +++ SP+ S+S+ +S +W H
Sbjct: 298 PAVTDHA-VYVGGFDNRIHALSPA----AGSESEGDQPADPASYFWAH 340
>gi|298384523|ref|ZP_06994083.1| cell surface protein [Bacteroides sp. 1_1_14]
gi|298262802|gb|EFI05666.1| cell surface protein [Bacteroides sp. 1_1_14]
Length = 655
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 107/255 (41%), Gaps = 42/255 (16%)
Query: 43 LIGEDGKIYAC----SEKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAE-- 96
L+G DG IY C S K ++A NGT WSL LD IG P G +Y +
Sbjct: 358 LVGPDGTIYQCVRDASIKNVYAINPNGTQKWSLQLD--GPIGAFPALSADGVLYCLTNKS 415
Query: 97 --------NRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVY----I 144
N +K GT+ SA + G + AI A S + ++ +
Sbjct: 416 TLYALDVANGAIKWQQSLDGTTGSAVAIDRNGHIYAGTSEAI--YAFSANKEELWKLSGV 473
Query: 145 NVKGRALFAFMTHGQLLWS-----AGPVLDQLGYRQGCTK-----TDVDCYFTSVPVIDQ 194
NV + FA +G L++ AG V + G K T D YF P++D+
Sbjct: 474 NVTEQGTFAL--NGNTLYATLKSKAGLVAVDI--TNGTKKWTYPTTGGDAYF---PIVDK 526
Query: 195 CEGSIYISNTQGE-LYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLA 253
+G +Y + + +Y++ A W++ +++ +G LY+ +
Sbjct: 527 -KGVVYFTEKGSQTVYAVDADGSKV-WVKKVNNNLNYSGAALSTDGVLYIGTQSNNKIFG 584
Query: 254 LDTSSGNILWHKSVG 268
L+T+ G+ ++ +SVG
Sbjct: 585 LNTADGSTVYEESVG 599
>gi|197285697|ref|YP_002151569.1| outer membrane protein assembly complex subunit YfgL [Proteus
mirabilis HI4320]
gi|227356208|ref|ZP_03840597.1| outer membrane protein assembly complex subunit YfgL [Proteus
mirabilis ATCC 29906]
gi|425068634|ref|ZP_18471750.1| outer membrane assembly lipoprotein YfgL [Proteus mirabilis WGLW6]
gi|425071900|ref|ZP_18475006.1| outer membrane assembly lipoprotein YfgL [Proteus mirabilis WGLW4]
gi|194683184|emb|CAR43821.1| putative lipoprotein [Proteus mirabilis HI4320]
gi|227163672|gb|EEI48588.1| outer membrane protein assembly complex subunit YfgL [Proteus
mirabilis ATCC 29906]
gi|404598269|gb|EKA98755.1| outer membrane assembly lipoprotein YfgL [Proteus mirabilis WGLW4]
gi|404599013|gb|EKA99475.1| outer membrane assembly lipoprotein YfgL [Proteus mirabilis WGLW6]
Length = 390
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 67/158 (42%), Gaps = 22/158 (13%)
Query: 147 KGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTK----TDVDCYFTSVPVIDQCEGSIYIS 202
GR ++ GQL+W + +G T+ DVD P+ID E ++Y
Sbjct: 211 NGRVSAVVLSQGQLVWQQ-----NISQVKGSTEISRLNDVDI----TPIID--ENTVYAM 259
Query: 203 NTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNIL 262
G L SL S W +DL S + L G+N YL + VLA+ S G L
Sbjct: 260 AYNGNLVSLDMRSGQIIWKRDLGSVNDMVLL--GDNLYL---VDQNDRVLAVRKSDGVTL 314
Query: 263 WHKSVGPLGSAEYAPVVDSNGWISVGSLDGLLYSFSPS 300
W + L AP + +G++ VG +G L+ S
Sbjct: 315 WTQE-DLLHRNLTAPAI-VDGYLVVGDAEGYLHWIDTS 350
>gi|374339806|ref|YP_005096542.1| WD40-like repeat protein [Marinitoga piezophila KA3]
gi|372101340|gb|AEX85244.1| WD40-like repeat protein [Marinitoga piezophila KA3]
Length = 1461
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 67/140 (47%), Gaps = 31/140 (22%)
Query: 191 VIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTP---------GNN-GY 240
V+D EG+IYI N G Y L + I + +K ++ TP GNN GY
Sbjct: 702 VLDD-EGNIYIGNDSGYFYKLDSKGSI---IWRFKTENKIWS-TPLYADNLIYFGNNEGY 756
Query: 241 LYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPVVDSNGWISVGSLDGLLYSFSPS 300
LY AL+ +G++ W + +A +PV+D+ G I +GS DG LY+ +P
Sbjct: 757 LY----------ALN-KNGDLKWKFKSEDIITA--SPVIDNKGIIYIGSWDGYLYAVNPD 803
Query: 301 GVLNKFSKSDTSDSVIQSSP 320
G L K++ S I SP
Sbjct: 804 GTLKWKFKTNNS---ISGSP 820
>gi|449096448|ref|YP_007428939.1| membrane associated protein kinase with beta-propeller domain
[Bacillus subtilis XF-1]
gi|449030363|gb|AGE65602.1| membrane associated protein kinase with beta-propeller domain
[Bacillus subtilis XF-1]
Length = 404
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 115/276 (41%), Gaps = 56/276 (20%)
Query: 43 LIGEDGKIYACS-EKTLFAFESNGTIAWSLDLDFTCNIG----TAPVHGGTGEVYIVAEN 97
+I DG +Y S + + AF +G++ W T N+G +PV G G +Y+ + +
Sbjct: 97 VIDGDGTVYLHSRDGEMKAFNPDGSVKW-----VTGNLGKTYTQSPVLGTNGVIYLASYD 151
Query: 98 RVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTH 157
+ K+ + T E T V +G + V S ++Y + + A
Sbjct: 152 K--KIYFIDKETGEILTTVPL--------SGGPSSETVIGSDGTLYFSTLDNYVHAIKPT 201
Query: 158 GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPY 217
+ W+ K + +SVPV+ G++Y+ Y++++ +
Sbjct: 202 SKSTWTE------------RWKLKTNGVVSSVPVL-ASNGTVYVGTYNNVFYAINSGTGQ 248
Query: 218 FNWIQDLSS-------FDKAFTLTPGN-NGYLYVTIPVRALVLALDTSSGNILWHKSVGP 269
W + S+ DK T+ GN +G LY TS+G++ W P
Sbjct: 249 VKWSRTTSNAFKGYPVIDKDGTVYAGNQDGQLYAY-----------TSTGSLKW---TFP 294
Query: 270 L-GSAEYAPVVDSNGWISVGSLDGLLYSFSPSGVLN 304
L G + +P +D NG I +GS G L+S S +G +N
Sbjct: 295 LNGFSSSSPAIDHNGNIYIGSGSGELFSISKNGDMN 330
>gi|413953502|gb|AFW86151.1| hypothetical protein ZEAMMB73_432269, partial [Zea mays]
Length = 1140
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 76/180 (42%), Gaps = 32/180 (17%)
Query: 147 KGRALFAFMTHGQLLWS--------AGPVLDQ----------------LGYRQGCTKTDV 182
KG+ F M+ G+L W+ PV+D+ L Y+ C V
Sbjct: 834 KGKIYFLDMSTGKLSWTFQTDGEVKMQPVVDKMRNLIWCGSYDHYLYALNYKDRCCTYKV 893
Query: 183 DC--YFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAF-TLTPGNNG 239
C P ID + IY+++T G + ++S P F + + F +L +
Sbjct: 894 FCGGSIYGSPAIDMAQNVIYVASTSGLVTAVSFKEPSFRVLWQYEAGAPIFGSLAIDHQS 953
Query: 240 YLYVTIPVRALVLALDTSSGNILWHKSV-GPL-GSAEYAPVVDSNGWISVGSLDGLLYSF 297
+ V LV+ L+ S G+++W +V GP+ A +P + + + S DG LYSF
Sbjct: 954 GTVICCLVNGLVMTLN-SQGSVVWKATVGGPIFAGACLSPTLPHQ--VLIPSRDGNLYSF 1010
>gi|242094414|ref|XP_002437697.1| hypothetical protein SORBIDRAFT_10g001030 [Sorghum bicolor]
gi|241915920|gb|EER89064.1| hypothetical protein SORBIDRAFT_10g001030 [Sorghum bicolor]
Length = 1113
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 75/181 (41%), Gaps = 32/181 (17%)
Query: 147 KGRALFAFMTHGQLLWS--------AGPVLDQ----------------LGYRQGCTKTDV 182
KG+ F M+ G+L W+ PV+D+ L Y+ C +
Sbjct: 835 KGKIYFLDMSTGKLSWTFQTDGEVKMQPVVDKTRNLIWCGSYDHYLYALNYKDRCCTYKI 894
Query: 183 DC--YFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAF-TLTPGNNG 239
C P D + IY+++T G + ++S P F + + F +L +
Sbjct: 895 SCGGSIYGSPATDMAQNIIYVASTSGLVTAVSFKEPPFRVLWQYEAGAPIFGSLAIDHQS 954
Query: 240 YLYVTIPVRALVLALDTSSGNILWHKSVGP--LGSAEYAPVVDSNGWISVGSLDGLLYSF 297
+ V LV+AL+ S G+I+W +VG A +P + + + S DG LYSF
Sbjct: 955 GKVICCLVNGLVMALN-SQGSIVWKATVGGSIFAGACLSPTLPHQ--VLIPSRDGNLYSF 1011
Query: 298 S 298
+
Sbjct: 1012 N 1012
>gi|262274784|ref|ZP_06052595.1| YfgL protein [Grimontia hollisae CIP 101886]
gi|262221347|gb|EEY72661.1| YfgL protein [Grimontia hollisae CIP 101886]
Length = 386
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 14/166 (8%)
Query: 135 VSTSSSSVYINVKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQ 194
VST+ + GR AF+ +G ++W + +G T+ D + PVID
Sbjct: 194 VSTAGGVFWGMANGRLGAAFIENGNIIWQ-----QPIASPKGATEIDRLVDVDATPVIDG 248
Query: 195 CEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLAL 254
+Y G+L ++ S W ++ SS L G+ YL++ I + V+A+
Sbjct: 249 A--LLYAVGYNGQLVAIDLRSGRSVWKRNYSS--STDFLVAGS--YLFL-ITDKDHVIAV 301
Query: 255 DTSSGNILWHKSVGPLGSAEYAPVVDSNGWISVGSLDGLLYSFSPS 300
D SG +W L + P +G++ VG +G L+ PS
Sbjct: 302 DVRSGTEIWQNR--ELEYRQLTPPASISGYVVVGDAEGYLHWMDPS 345
>gi|386760695|ref|YP_006233912.1| membrane associated protein kinase with beta-propeller domain
[Bacillus sp. JS]
gi|384933978|gb|AFI30656.1| membrane associated protein kinase with beta-propeller domain
[Bacillus sp. JS]
Length = 411
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 116/276 (42%), Gaps = 56/276 (20%)
Query: 43 LIGEDGKIYACS-EKTLFAFESNGTIAWSLDLDFTCNIG----TAPVHGGTGEVYIVAEN 97
+I DG +Y S + + AF +G++ W T N+G +PV G G +Y+ + +
Sbjct: 104 VIDGDGTVYLHSRDGEMKAFNPDGSVKW-----VTGNLGKTFTQSPVLGTNGVIYLASYD 158
Query: 98 RVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTH 157
+ K+ + T E T V +G + V S ++Y + + A
Sbjct: 159 K--KIYFIDKETGEILTTVPL--------SGGPSSETVIGSDGTLYFSTLDNYVHAIKPT 208
Query: 158 GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPY 217
+ W+ K + +SVPV+ + G++Y+ Y++++ +
Sbjct: 209 SKSTWTE------------RWKLKTNGVVSSVPVLAK-NGTVYVGTYNNVFYAINSGTGQ 255
Query: 218 FNWIQDLSS-------FDKAFTLTPGN-NGYLYVTIPVRALVLALDTSSGNILWHKSVGP 269
W + S+ DK T+ GN +G LY +S+G++ W P
Sbjct: 256 VKWSRTTSNAFKGYPVIDKDGTVYAGNQDGQLYAY-----------SSTGSLKW---TFP 301
Query: 270 L-GSAEYAPVVDSNGWISVGSLDGLLYSFSPSGVLN 304
L G + +P +D NG I +GS G L+S S +G +N
Sbjct: 302 LNGFSSSSPAIDHNGNIYIGSGSGELFSISKNGDMN 337
>gi|448369763|ref|ZP_21556315.1| pyrrolo-quinoline quinone [Natrialba aegyptia DSM 13077]
gi|445650938|gb|ELZ03854.1| pyrrolo-quinoline quinone [Natrialba aegyptia DSM 13077]
Length = 412
Score = 42.4 bits (98), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 119/305 (39%), Gaps = 61/305 (20%)
Query: 47 DGKIYACSEK-TLFAFE-SNGTIAWSLDLDFTCNIGTAPVHG------GTGEVYIVAENR 98
DG +Y S+ +L+A S+GT WS + D + A V G G G VY + +
Sbjct: 99 DGVVYVGSDDGSLYAISASSGTERWSFETDDSVTSSPAVVDGTVYVGSGDGSVYAIPADA 158
Query: 99 VLKVDL-LKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAF-MT 156
D ++ T GA+AG + + + VY+ L+A
Sbjct: 159 NSTPDAEWRVETE-----------------GAVAG-SPTVADGVVYVGSSDNHLYAISAA 200
Query: 157 HGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSP 216
G++LW + + D P + +G++Y+ + G LY++ S
Sbjct: 201 DGEVLW----------------RFETDETILRAPAV--ADGTVYVGSNDGSLYAIDTDSE 242
Query: 217 YFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYA 276
W L + D+ + NG +YV + A + SG + W + GS +
Sbjct: 243 TERW--QLETDDRIQSRPTVANGAVYVGSNDN-TIYAAEADSGEVRWTFQI--EGSVTAS 297
Query: 277 PVVDSNGWISVGSLDGLLYSFSPSGVLNKFSKSDTSDSVIQSSPYWFHLLGPSIGLKAIL 336
P V + + VG D +++ SP+ S+S+ +S +W H GL A+
Sbjct: 298 PAVTDHA-VYVGGFDNRVHALSPA----AESESEGDQPADPASYFWTHR-----GLNAVR 347
Query: 337 CLMVV 341
VV
Sbjct: 348 SSPVV 352
>gi|343501752|ref|ZP_08739621.1| outer membrane biogenesis protein BamB [Vibrio tubiashii ATCC
19109]
gi|418481165|ref|ZP_13050213.1| outer membrane biogenesis protein BamB [Vibrio tubiashii NCIMB 1337
= ATCC 19106]
gi|342816877|gb|EGU51769.1| outer membrane biogenesis protein BamB [Vibrio tubiashii ATCC
19109]
gi|384571117|gb|EIF01655.1| outer membrane biogenesis protein BamB [Vibrio tubiashii NCIMB 1337
= ATCC 19106]
Length = 386
Score = 42.4 bits (98), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 105/258 (40%), Gaps = 43/258 (16%)
Query: 40 SKPLIG-EDGKIYACSEKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAENR 98
S+ IG E+G++ A +E+T G + W +D+D + TAP T Y++
Sbjct: 112 SQIFIGSENGQVIAFNEET-------GEVNWQVDVD--GEVLTAPA---TDSNYVIVHTN 159
Query: 99 VLKVDLLKIGTSES----ATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAF 154
+ L T E+ +T+V T G V+ S + GR A
Sbjct: 160 SGMLVALDQETGETKWTISTEVPNLTLRGNS-------TPVTASGGVFWGTANGRLAAAI 212
Query: 155 MTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAH 214
+ GQL+W +G QG T+ D + P+I S+YI G+L ++
Sbjct: 213 VERGQLIWQ-----QPIGMPQGATEIDRLVDVDAAPLI--LGSSLYIVGYNGQLTAIDLR 265
Query: 215 SPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILW------HKSV- 267
S W + SS T + LY+ LV A+D SG LW H+ +
Sbjct: 266 SGKPAWKRSYSS----ATDLASDGSRLYLVTEKDHLV-AVDARSGTELWTNDQLEHRLLT 320
Query: 268 GPLGSAEYAPVVDSNGWI 285
P+ EY V DS G++
Sbjct: 321 APVMIDEYVVVGDSEGYL 338
>gi|284006777|emb|CBA72041.1| lipoprotein [Arsenophonus nasoniae]
Length = 392
Score = 42.4 bits (98), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 106/261 (40%), Gaps = 26/261 (9%)
Query: 39 LSKPLIGEDGKIYACSE--KTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAE 96
LS L K+Y +E K + +++G +AW + D + PV G V I
Sbjct: 109 LSSGLTVSGDKLYIGTETGKVIALNKADGEMAW--ETDVAGEALSQPVVS-DGLVLIHTS 165
Query: 97 NRVLKVDLLKIGTSESATQVFYGTGS--GKGGTGAIAGIAVSTSSSSVYINVKGRALFAF 154
N VL+ G S+ + + T S GK G+A+ S GR
Sbjct: 166 NGVLQALDAHTGQSKWSINLDTSTLSVRGKSAPATAYGVAIVGSDG-------GRISAVM 218
Query: 155 MTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAH 214
+ GQ+ W + Q+ +G T+ D PVID G+I+ G+L ++
Sbjct: 219 LAQGQIAWQ--QYISQI---RGATEIDRLHDINMTPVIDINSGAIFAIAYNGDLVAMDMR 273
Query: 215 SPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAE 274
S W +DL S + N +Y+ + VLA+ S G +W + L
Sbjct: 274 SSQIIWKRDLGSVNDIIV----ANDIIYL-VDQNDRVLAIRKSDGVTVWAQD-ALLHRNL 327
Query: 275 YAPVVDSNGWISVGSLDGLLY 295
AP + +G++ VG +G L+
Sbjct: 328 TAPAI-YDGYLVVGDGEGYLH 347
>gi|357514737|ref|XP_003627657.1| Acetyl-coenzyme A synthetase [Medicago truncatula]
gi|355521679|gb|AET02133.1| Acetyl-coenzyme A synthetase [Medicago truncatula]
Length = 1224
Score = 42.4 bits (98), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 71/147 (48%), Gaps = 13/147 (8%)
Query: 159 QLLW--SAGPVLDQLGYRQGCTKTDVDC--YFTSVPVIDQCEGSIYISNTQGELYSLSAH 214
QL+W S L L Y+ C + C P ID+ G +Y+++T G + ++S
Sbjct: 964 QLIWCGSYDHTLYALDYKNHCCVYKLSCGGSIYGSPAIDEVRGLLYVASTGGRITAVSIS 1023
Query: 215 SPYFN--WIQDLSSFDKAF-TLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSV-GPL 270
F+ W+ +L F +L NG + + V VLALD +G+I+W K+ GP+
Sbjct: 1024 GSPFSILWLLELEV--PVFGSLAVTKNGTVICCL-VDGHVLALD-PNGSIVWKKTTGGPI 1079
Query: 271 GSAEYAPVVDSNGWISVGSLDGLLYSF 297
+ P V+ + + V +G +YSF
Sbjct: 1080 FAGPCIPSVNPHE-VLVCCRNGSVYSF 1105
>gi|86145597|ref|ZP_01063927.1| hypothetical protein MED222_01547 [Vibrio sp. MED222]
gi|85836568|gb|EAQ54694.1| hypothetical protein MED222_01547 [Vibrio sp. MED222]
Length = 386
Score = 42.0 bits (97), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 71/163 (43%), Gaps = 18/163 (11%)
Query: 135 VSTSSSSVYINVKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQ 194
V+ S + GR A + GQL+W PV G +G T+ D + PV+
Sbjct: 193 VTVSGGVFWGTANGRLAAAIVDRGQLIWQQ-PV----GTPKGATEIDRLVDVDASPVV-- 245
Query: 195 CEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLAL 254
G++Y G+L ++ S W ++ SS A L ++G + + V+A+
Sbjct: 246 LGGTLYTVGINGQLIAIDLRSGKPVWKRNYSS---AIDLA--SDGSRLFVVTDKDHVVAV 300
Query: 255 DTSSGNILWHKSVGPLGSAEY--APVVDSNGWISVGSLDGLLY 295
D SG LW PL AP + NG++ VG +G L+
Sbjct: 301 DARSGTELWST---PLLENRLLTAPAI-INGYVVVGDTEGYLH 339
>gi|20089734|ref|NP_615809.1| cell surface protein [Methanosarcina acetivorans C2A]
gi|19914667|gb|AAM04289.1| cell surface protein [Methanosarcina acetivorans C2A]
Length = 2275
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 29 KVPYRRSAFRLSKPLIGEDGKIYA-CSEKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGG 87
K Y + LS P IG DG I+A C + ++A +GT+ WS +I P G
Sbjct: 594 KWSYTTGGYVLSGPAIGSDGTIFAGCYDYNVYALNPDGTLKWSYTTG--GHIFNIPAIGS 651
Query: 88 TGEVYIVAENRVL 100
G +YI +++ L
Sbjct: 652 DGTIYIGCQDKNL 664
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 137/366 (37%), Gaps = 63/366 (17%)
Query: 36 AFRLSKPLIGEDGKIYACS--EKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYI 93
++R P IG DG IY S + L+A +GT WS ++P G G +Y+
Sbjct: 440 SYRAVSPSIGADGIIYVGSQFDHKLYALYPDGTEKWSYS---GSTYFSSPTIGSNGTIYV 496
Query: 94 VAENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFA 153
+ + L L GT + + + TG G I S ++YI L+A
Sbjct: 497 GSMDSNLYA-LNPDGTLKWS----FATG------GEIYAAPAIGSDGTIYIGSNDDKLYA 545
Query: 154 FMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSA 213
G W+ D +R G P I +G++Y N +Y+L+
Sbjct: 546 LNPDGTEKWNYTAGND---FRYGS------------PAI-GPDGTVYAGNMDNNVYALNP 589
Query: 214 HSPYFNWIQDLSSFDKAFTLTP---GNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPL 270
W S + L+ G++G ++ V AL+ G + W + G
Sbjct: 590 DGT-LKW----SYTTGGYVLSGPAIGSDGTIFAGC-YDYNVYALN-PDGTLKWSYTTG-- 640
Query: 271 GSAEYAPVVDSNGWISVGSLDGLLYSFSPSGVLNKFSKSDTSDSVIQSSPY--------- 321
G P + S+G I +G D LY+ +P G K+ K S+SV SSP
Sbjct: 641 GHIFNIPAIGSDGTIYIGCQDKNLYALNPDGT-EKW-KYLLSNSVTYSSPVIGSDGTIYL 698
Query: 322 --------WFHLLGPSIGLKAILCLMVVGQFSSLLSKSDLQHFVLDESLVLAFLTASNQK 373
+FH + P K Q S++ + V+D L+ AF +
Sbjct: 699 GVRNSVGNYFHAINPDGTEKWKYLTGSTIQSPSVIGSDGTLYVVMDNRLLYAFRDTEAEP 758
Query: 374 LVASCS 379
VA S
Sbjct: 759 SVADFS 764
>gi|218708644|ref|YP_002416265.1| outer membrane protein assembly complex subunit YfgL [Vibrio
splendidus LGP32]
gi|218321663|emb|CAV17617.1| putative lipoprotein [Vibrio splendidus LGP32]
Length = 386
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 71/163 (43%), Gaps = 18/163 (11%)
Query: 135 VSTSSSSVYINVKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQ 194
V+ S + GR A + GQL+W PV G +G T+ D + PV+
Sbjct: 193 VTVSGGVFWGTANGRLAAAIVDRGQLIWQQ-PV----GTPKGATEIDRLVDVDASPVV-- 245
Query: 195 CEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLAL 254
G++Y G+L ++ S W ++ SS A L ++G + + V+A+
Sbjct: 246 LGGTLYTVGINGQLIAIDLRSGKPVWKRNYSS---AIDLA--SDGSRLFVVTDKDHVVAV 300
Query: 255 DTSSGNILWHKSVGPLGSAEY--APVVDSNGWISVGSLDGLLY 295
D SG LW PL AP + NG++ VG +G L+
Sbjct: 301 DARSGTELWST---PLLENRLLTAPAI-INGYVVVGDTEGYLH 339
>gi|298483691|ref|ZP_07001865.1| cell surface protein [Bacteroides sp. D22]
gi|295087581|emb|CBK69104.1| FOG: WD40-like repeat [Bacteroides xylanisolvens XB1A]
gi|298270108|gb|EFI11695.1| cell surface protein [Bacteroides sp. D22]
Length = 654
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 107/260 (41%), Gaps = 53/260 (20%)
Query: 43 LIGEDGKIYAC----SEKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAENR 98
L+ DG IY C + ++A NGT W++ LD +G P G +Y +
Sbjct: 358 LVASDGTIYQCVRNATINNVYAINPNGTQKWAVKLD--AAVGAFPALSVDGVLYCLTNKS 415
Query: 99 VLKVDLLKIGTSESATQVFYGTGSGKGGTGAI-----AGIAVSTSSSSVY---------- 143
L ++++ V S G TG+ AG + +S+++Y
Sbjct: 416 TLYA-------LDASSGVIKWQQSLDGATGSAVAIDKAGNVYAGTSAAIYAFKPNKDQIW 468
Query: 144 ----INVKGRALFAFMTHGQLLWSA--GPVLDQLGYRQGCTK-----TDVDCYFTSVPVI 192
+NV +A FA Q+L++ G L + G K T D YF P++
Sbjct: 469 KLEEVNVTEQATFAL--KDQMLYATLKGGGLVAVDMTNGTKKWTYPTTKGDAYF---PIV 523
Query: 193 DQCEGSIYISNTQGELYSLSAHSPYFN----WIQDLSSFDKAFTLTPGNNGYLYVTIPVR 248
D+ G+IY + E S + H+ N W + + + +G LY+
Sbjct: 524 DK-NGNIYFT----EKGSQTVHAVNANGAKIWEKKVGNNLNYSGGALSTDGILYIGTQSG 578
Query: 249 ALVLALDTSSGNILWHKSVG 268
VL LD ++GNI++ ++VG
Sbjct: 579 NKVLGLDITNGNIVFEETVG 598
>gi|389846778|ref|YP_006349017.1| cell surface protein or serine/threonine protein kinase-related
protein [Haloferax mediterranei ATCC 33500]
gi|388244084|gb|AFK19030.1| putative cell surface protein or serine/threonine protein
kinase-related protein [Haloferax mediterranei ATCC
33500]
Length = 325
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 59/114 (51%), Gaps = 9/114 (7%)
Query: 186 FTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTI 245
F + P +D E S+Y+++T G+L+++S + +W+ D+ ++ + ++ +
Sbjct: 177 FDAAPAVD--EASVYVASTDGKLHAISRDTGDRSWMVDVPQQTRSSVAVADGSAFV---L 231
Query: 246 PVRALVLALDTSSGNILWH-KSVGPLGSAEYAPVVDSNGWISVGSLDGLLYSFS 298
V A T G+ W ++ PL A+ A V D+ + VG+ DG++Y+ +
Sbjct: 232 DYEGTVRAFATEDGSQQWSVETERPLARADPAVVRDT---VYVGAFDGVVYALN 282
>gi|444377298|ref|ZP_21176530.1| Outer membrane protein YfgL [Enterovibrio sp. AK16]
gi|443678588|gb|ELT85256.1| Outer membrane protein YfgL [Enterovibrio sp. AK16]
Length = 386
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 74/170 (43%), Gaps = 22/170 (12%)
Query: 135 VSTSSSSVYINVKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQ 194
VSTS + GR AF+ +G ++W P+ +G T+ D + PVID
Sbjct: 194 VSTSGGVFWGMANGRLGAAFVENGNIIWQQ-PIASP----KGATEIDRLVDVDATPVIDG 248
Query: 195 CEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLAL 254
+Y G+L ++ S W + SS L G+ YL++ I + V+A+
Sbjct: 249 A--LLYAVGYNGQLVAIDLRSGRPAWKRTYSS--STDFLVAGS--YLFL-ITDKDHVVAV 301
Query: 255 DTSSGNILWHKSVGPLGSAEY----APVVDSNGWISVGSLDGLLYSFSPS 300
D SG LW EY APV S G++ VG +G L+ P+
Sbjct: 302 DARSGTELWQNR-----DLEYRQLTAPVAIS-GYVVVGDAEGYLHWMDPN 345
>gi|223938613|ref|ZP_03630504.1| Pyrrolo-quinoline quinone [bacterium Ellin514]
gi|223892732|gb|EEF59202.1| Pyrrolo-quinoline quinone [bacterium Ellin514]
Length = 446
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 40 SKPLIGEDGKIYACSEKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYI 93
S P + DG +Y ++ LFA S GT+ W +D + G +P+ G G +Y+
Sbjct: 116 SSPALALDGTVYFVADAELFALTSYGTVKWHTPIDASIYSGWSPIIGDDGTIYV 169
>gi|170755419|ref|YP_001781724.1| tail fiber protein [Clostridium botulinum B1 str. Okra]
gi|429244986|ref|ZP_19208403.1| tail fiber protein [Clostridium botulinum CFSAN001628]
gi|169120631|gb|ACA44467.1| putative tail fiber protein [Clostridium botulinum B1 str. Okra]
gi|428757979|gb|EKX80434.1| tail fiber protein [Clostridium botulinum CFSAN001628]
Length = 601
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 96/253 (37%), Gaps = 43/253 (16%)
Query: 48 GKIYACSEKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYI-VAENRVLKVDLLK 106
GKIY S K L + +G I W D V G VYI N ++K+D
Sbjct: 345 GKIYCISTKILSKIDEDGYIYWQYKYDEII----QSVAVKNGYVYIGTYNNHIIKMD--- 397
Query: 107 IGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTHGQLLWSAGP 166
S S ++ S + G +I V + +Y R + + G+++W
Sbjct: 398 ---SSSGNIIWNNYYSSRYGILSI----VIDDDNIIYAGTDNREVIKIDSTGKIIW---- 446
Query: 167 VLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSS 226
K D + ID+ G IY S L L ++ WIQD S
Sbjct: 447 ------------KYDKHKNSVNTIAIDK-NGYIY-SGGGSRLVKLCSNGGE-EWIQDFSY 491
Query: 227 FDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSA------EYAPVVD 280
++ NNGY+Y+ + ++ +G +WH +G SA +Y V
Sbjct: 492 --SIASMAIDNNGYVYIGYVYNGIA-KINPDNGEQIWHVDLGLNISANSIFVDDYVYVAS 548
Query: 281 SNGWISVGSLDGL 293
S+ I +LDGL
Sbjct: 549 SDKMIRKINLDGL 561
>gi|423213010|ref|ZP_17199539.1| hypothetical protein HMPREF1074_01071 [Bacteroides xylanisolvens
CL03T12C04]
gi|392694266|gb|EIY87494.1| hypothetical protein HMPREF1074_01071 [Bacteroides xylanisolvens
CL03T12C04]
Length = 654
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 105/260 (40%), Gaps = 53/260 (20%)
Query: 43 LIGEDGKIYACSEK----TLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAENR 98
L+ DG IY C ++A NGT W++ LD IG P G +Y +
Sbjct: 358 LVAPDGTIYQCVRNATINNVYAINPNGTQKWAVKLD--AAIGAFPALSADGVLYCLTNKS 415
Query: 99 VLKVDLLKIGTSESATQVFYGTGSGKGGTGAI-----AGIAVSTSSSSVY---------- 143
L ++++ V S G TG+ AG + +S+++Y
Sbjct: 416 TLYA-------LDASSGVIKWQQSLDGATGSAVAIDKAGNVYAGTSAAIYAFKPNKDQIW 468
Query: 144 ----INVKGRALFAFMTHGQLLWSA--GPVLDQLGYRQGCTK-----TDVDCYFTSVPVI 192
+NV +A FA Q+L++ G L + G K T D YF P++
Sbjct: 469 KLEEVNVTEQATFAL--KDQMLYATLKGGGLVAVDMTNGTKKWTYPTTKGDAYF---PIV 523
Query: 193 DQCEGSIYISNTQGELYSLSAHSPYFN----WIQDLSSFDKAFTLTPGNNGYLYVTIPVR 248
D+ G+IY + E S + H+ N W + + + +G LY+
Sbjct: 524 DK-NGNIYFT----EKGSQTVHAVNANGAKIWEKKVGNNLNYSGGALSTDGILYIGTQSN 578
Query: 249 ALVLALDTSSGNILWHKSVG 268
VL LD ++GN ++ ++VG
Sbjct: 579 NKVLGLDITNGNSVFEETVG 598
>gi|355572913|ref|ZP_09043911.1| PKD domain containing protein [Methanolinea tarda NOBI-1]
gi|354824028|gb|EHF08285.1| PKD domain containing protein [Methanolinea tarda NOBI-1]
Length = 1627
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 58/126 (46%), Gaps = 11/126 (8%)
Query: 197 GSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYV-TIPVRALVLALD 255
G +Y+ + G LY+L AH+ W S A G G +Y T ALD
Sbjct: 265 GVVYVGSDDGRLYALDAHTGNPVWSYQAGSGISASPAVAG--GVVYAGTSGSPGTFFALD 322
Query: 256 TSSGNILWHKSVGPLGSAEYAPVVDSNGWISVGSLDGLLYSFS------PSGVLNKFSKS 309
S+G++LW S G +P V ++G + G DG LY+F P+GV + +
Sbjct: 323 ASTGDLLWDHSFGKH-PCSGSPAV-AHGIVYAGCDDGGLYAFGSSGESPPAGVTGLHAAA 380
Query: 310 DTSDSV 315
T+DS+
Sbjct: 381 ATNDSI 386
>gi|50812309|ref|NP_391873.2| membrane associated protein kinase [Bacillus subtilis subsp.
subtilis str. 168]
gi|221311966|ref|ZP_03593813.1| hypothetical protein Bsubs1_21536 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221316290|ref|ZP_03598095.1| hypothetical protein BsubsN3_21447 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221321203|ref|ZP_03602497.1| hypothetical protein BsubsJ_21390 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221325486|ref|ZP_03606780.1| hypothetical protein BsubsS_21546 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|402778159|ref|YP_006632103.1| membrane associated protein kinase [Bacillus subtilis QB928]
gi|452912782|ref|ZP_21961410.1| hypothetical protein BS732_1108 [Bacillus subtilis MB73/2]
gi|34395994|sp|P42111.3|YXAL_BACSU RecName: Full=Uncharacterized protein YxaL; Flags: Precursor
gi|32468844|emb|CAB16030.2| membrane associated protein kinase with beta-propeller domain
[Bacillus subtilis subsp. subtilis str. 168]
gi|402483338|gb|AFQ59847.1| Membrane associated protein kinase withbeta-propeller [Bacillus
subtilis QB928]
gi|407962841|dbj|BAM56081.1| membrane associated protein kinase [Bacillus subtilis BEST7613]
gi|407966853|dbj|BAM60092.1| membrane associated protein kinase [Bacillus subtilis BEST7003]
gi|452117810|gb|EME08204.1| hypothetical protein BS732_1108 [Bacillus subtilis MB73/2]
Length = 410
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 115/276 (41%), Gaps = 56/276 (20%)
Query: 43 LIGEDGKIYACS-EKTLFAFESNGTIAWSLDLDFTCNIG----TAPVHGGTGEVYIVAEN 97
+I DG +Y S + + AF +G++ W T N+G +PV G G +Y+ + +
Sbjct: 103 VIDGDGTVYLHSRDGEMKAFNPDGSVKW-----VTGNLGKTYTQSPVLGTNGVIYLASYD 157
Query: 98 RVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTH 157
+ K+ + T E T V +G + V S ++Y + + A
Sbjct: 158 K--KIYFIDKETGEILTTVPL--------SGGPSSETVIGSDGTLYFSTLDNYVHAIKPT 207
Query: 158 GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPY 217
+ W+ K + +SVPV+ + G++Y+ Y++++ +
Sbjct: 208 SKSTWTE------------RWKLKTNGVVSSVPVLAK-NGTVYVGTYNYVFYAINSGTGQ 254
Query: 218 FNWIQDLSS-------FDKAFTLTPGN-NGYLYVTIPVRALVLALDTSSGNILWHKSVGP 269
W + S+ DK + GN +G LY TS+G++ W P
Sbjct: 255 VKWSRTTSNAFKGYPVIDKDGNIYAGNQDGQLYAY-----------TSTGSLKW---TFP 300
Query: 270 L-GSAEYAPVVDSNGWISVGSLDGLLYSFSPSGVLN 304
L G + +P +D NG I +GS G L+S S +G +N
Sbjct: 301 LNGFSSSSPAIDHNGNIYIGSGSGELFSISKNGDMN 336
>gi|417950300|ref|ZP_12593424.1| outer membrane biogenesis protein BamB [Vibrio splendidus ATCC
33789]
gi|342806779|gb|EGU41991.1| outer membrane biogenesis protein BamB [Vibrio splendidus ATCC
33789]
Length = 386
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 71/163 (43%), Gaps = 18/163 (11%)
Query: 135 VSTSSSSVYINVKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQ 194
V+ S + GR A + GQL+W PV G +G T+ D + PV+
Sbjct: 193 VAVSGGVFWGTANGRLAAAIVERGQLIWQQ-PV----GTPKGATEIDRLVDVDASPVV-- 245
Query: 195 CEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLAL 254
G++Y G+L ++ S W ++ SS A L ++G + + V+A+
Sbjct: 246 LGGTLYTVGINGQLIAIDLRSGKPVWKRNYSS---AIDLA--SDGSRLFLVTDKDHVVAV 300
Query: 255 DTSSGNILWHKSVGPLGSAEY--APVVDSNGWISVGSLDGLLY 295
D SG LW PL AP + NG++ VG +G L+
Sbjct: 301 DARSGTELWST---PLLENRLLTAPAI-INGYVVVGDTEGYLH 339
>gi|84387628|ref|ZP_00990645.1| hypothetical protein V12B01_09161 [Vibrio splendidus 12B01]
gi|84377473|gb|EAP94339.1| hypothetical protein V12B01_09161 [Vibrio splendidus 12B01]
Length = 386
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 18/163 (11%)
Query: 135 VSTSSSSVYINVKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQ 194
V+ S + GR A + GQL+W PV G +G T+ D + P++
Sbjct: 193 VAVSGGVFWGTANGRLAAAIVDRGQLIWQQ-PV----GTPKGATEIDRLVDVDASPIV-- 245
Query: 195 CEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLAL 254
G++Y G+L ++ S W ++ SS A L ++G + + V+A+
Sbjct: 246 LGGTLYTVGINGQLIAIDLRSGKPIWKRNYSS---AIDLA--SDGSRLFVVTDKDHVVAV 300
Query: 255 DTSSGNILWHKSVGPLGSAEY--APVVDSNGWISVGSLDGLLY 295
D SG LW PL AP + NG++ VG +G L+
Sbjct: 301 DARSGTELWST---PLLENRLLTAPAI-INGYVVVGDTEGYLH 339
>gi|448615480|ref|ZP_21664311.1| putative cell surface protein or serine/threonine protein
kinase-related protein [Haloferax mediterranei ATCC
33500]
gi|445752279|gb|EMA03705.1| putative cell surface protein or serine/threonine protein
kinase-related protein [Haloferax mediterranei ATCC
33500]
Length = 293
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 59/114 (51%), Gaps = 9/114 (7%)
Query: 186 FTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTI 245
F + P +D E S+Y+++T G+L+++S + +W+ D+ ++ + ++ +
Sbjct: 145 FDAAPAVD--EASVYVASTDGKLHAISRDTGDRSWMVDVPQQTRSSVAVADGSAFV---L 199
Query: 246 PVRALVLALDTSSGNILWH-KSVGPLGSAEYAPVVDSNGWISVGSLDGLLYSFS 298
V A T G+ W ++ PL A+ A V D+ + VG+ DG++Y+ +
Sbjct: 200 DYEGTVRAFATEDGSQQWSVETERPLARADPAVVRDT---VYVGAFDGVVYALN 250
>gi|384267502|ref|YP_005423209.1| putative WD repeat-containing protein [Bacillus amyloliquefaciens
subsp. plantarum YAU B9601-Y2]
gi|380500855|emb|CCG51893.1| putative WD repeat-containing protein [Bacillus amyloliquefaciens
subsp. plantarum YAU B9601-Y2]
Length = 451
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 87/217 (40%), Gaps = 47/217 (21%)
Query: 131 AGIAVSTSSSSVYINVKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKT---------- 180
AG AV +V+I K L A+ G + W V + LG T
Sbjct: 103 AGAAVD-GDGTVFIQSKDGKLTAYHPDGTVKW----VTENLGTTYTLTPVLGTNGVIYLP 157
Query: 181 --DVDCYF---------TSVPVIDQ--------CEGSIYISNTQGELYSLSAHSPYFNWI 221
D YF TSVP+ +G++Y+S +Y++ SP W
Sbjct: 158 SHDKKLYFIDKETGNILTSVPLSGAPSSDAAIGSDGTLYVSTLDNYIYAIKPTSPS-TWT 216
Query: 222 QDLS-SFDKAFTLTP--GNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPV 278
Q + P +NG LY T + A+++ +G + W K+ G Y PV
Sbjct: 217 QKWKFKTNGVVGSAPVLASNGTLY-TATYNNIFYAINSGTGQVKWSKTTSN-GFKGY-PV 273
Query: 279 VDSNGWISVGSLDGLLYSFSPSGV------LNKFSKS 309
+D +G + G+ DG LY+++ +G LN FS S
Sbjct: 274 IDRDGTVYAGNQDGNLYAYTSTGAVKWTFPLNGFSSS 310
>gi|338731165|ref|YP_004660557.1| Pyrrolo-quinoline quinone repeat-containing protein [Thermotoga
thermarum DSM 5069]
gi|335365516|gb|AEH51461.1| Pyrrolo-quinoline quinone repeat-containing protein [Thermotoga
thermarum DSM 5069]
Length = 126
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 40 SKPLIGEDGKIYACS-EKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYI 93
S P+IG DG IY S +K ++A + NGT+ W + D + ++P G G +Y+
Sbjct: 65 SSPVIGSDGTIYVGSWDKNVYALDPNGTLKWRFETD--DRVISSPAIGSDGTIYV 117
>gi|282895336|ref|ZP_06303538.1| hypothetical protein CRD_00032 [Raphidiopsis brookii D9]
gi|281199642|gb|EFA74502.1| hypothetical protein CRD_00032 [Raphidiopsis brookii D9]
Length = 794
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 76/162 (46%), Gaps = 27/162 (16%)
Query: 191 VIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDL--SSFDK-AFTLTPGNNGYLYVT--- 244
V +GSIY++N G + W ++L SS+D + +T G++G +YV
Sbjct: 229 VTTGSDGSIYVANEGGFITKNKPEDGTQVWKKNLGTSSYDILSRAITTGSDGSIYVVGGT 288
Query: 245 ---------IPVRALVLALDTSSGNILWHKSVGPLGSAE--YAPVVDSNGWI-SVGSLDG 292
IP V+A +S GN++W +S+G G + YA V+ S+G I + GS G
Sbjct: 289 RESGSSNAVIPKYDAVIAKYSSDGNLVWRRSLGTTGGDDFAYAVVLGSDGSIYAAGSTQG 348
Query: 293 LL----YSFSPSGVL-NKFSKSDTSDSVIQSSPYWFHLLGPS 329
L Y+ SG+ + F TSD + W LLG S
Sbjct: 349 NLNSENYNGDSSGLSGDAFITKYTSD----GTRVWTRLLGTS 386
>gi|218130155|ref|ZP_03458959.1| hypothetical protein BACEGG_01743 [Bacteroides eggerthii DSM 20697]
gi|217987659|gb|EEC53987.1| PQQ enzyme repeat protein [Bacteroides eggerthii DSM 20697]
Length = 689
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 112/258 (43%), Gaps = 53/258 (20%)
Query: 43 LIGEDGKIYAC-SEKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAENRVLK 101
L+G+DG +Y C + ++A NG W++ LD G P G +Y + K
Sbjct: 384 LVGDDGTVYQCDATNRVYAITPNGDTKWTVQLDGAT--GAFPALSKDGVLYCLTN----K 437
Query: 102 VDLLKIGTSESATQVFYGTGSGKGGTG-AIA----GIAVSTSSSSVY------------- 143
+ L + T ++ +F T G GG G A+A G + +S ++
Sbjct: 438 ITLYALDTKDNGKILFQET-LGTGGNGSAVAVDKDGNVYAGTSLGIFFFDASGGKRFEPL 496
Query: 144 --INVKGRALFAFMTHGQLLW-----SAGPV-LDQLGYRQGCTKTD---VDCYFTSVPVI 192
+NV R FA +G L+ + G + +D + ++ T D YF P++
Sbjct: 497 TGVNVTERGSFAL--NGNHLYATLKATGGLISVDMVTGKKEWTYNSGIGTDSYF---PIV 551
Query: 193 DQCEGSIYIS-----NTQGELYSLSAHSPYFNWIQDLSSFDKAFT---LTPGNNGYLYVT 244
D+ G +Y + N +Y+++A S W +++ + ++ T +T G +GYLYV
Sbjct: 552 DK-NGVVYFTDKGAKNKNAHVYAVNA-SGNLEWSKEIGT-NQQLTYNGVTLGADGYLYVG 608
Query: 245 IPVRALVLALDTSSGNIL 262
V LDT+S L
Sbjct: 609 HSGGKKVWKLDTNSNGAL 626
>gi|448408418|ref|ZP_21574213.1| serine/threonine protein kinase [Halosimplex carlsbadense 2-9-1]
gi|445674273|gb|ELZ26817.1| serine/threonine protein kinase [Halosimplex carlsbadense 2-9-1]
Length = 437
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 80/186 (43%), Gaps = 39/186 (20%)
Query: 39 LSKPLIGEDGKIYACS-EKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAEN 97
++ P + DG +YA S + L+A ++G + W+ DL + N V +++ +EN
Sbjct: 253 ITAPPVYADGTVYATSADHELYAVSASGGLEWTTDLGASAN----GVAHRDRRLFVTSEN 308
Query: 98 -RVLKVDLL-KIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAF- 154
R+ +V++ G S F T + + + V+ +G LFAF
Sbjct: 309 NRITQVNVRGSTGWEVSRGDAFAAT--------------PAVTENRVFAGTRGGTLFAFD 354
Query: 155 MTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAH 214
++ G+ LW T+ T+ PV+ +G++Y+ G +Y+++A
Sbjct: 355 VSDGRELWRV---------------TEPSGGVTAPPVV--ADGTVYVGARDGTVYAVTAD 397
Query: 215 SPYFNW 220
+ W
Sbjct: 398 TGDLEW 403
>gi|297605045|ref|NP_001056587.2| Os06g0111600 [Oryza sativa Japonica Group]
gi|55295907|dbj|BAD67775.1| putative 2-aminoadipic 6-semialdehyde dehydrogenase [Oryza sativa
Japonica Group]
gi|255676649|dbj|BAF18501.2| Os06g0111600 [Oryza sativa Japonica Group]
Length = 986
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 71/155 (45%), Gaps = 15/155 (9%)
Query: 159 QLLW--SAGPVLDQLGYRQGCTKTDVDC--YFTSVPVIDQCEGSIYISNTQGELYSLSAH 214
L+W S L L Y+ C + C P ID IY+++T G + ++S
Sbjct: 734 NLIWCGSYDHHLYALNYKDRCCTYKISCGGSIYGSPAIDMTHNMIYVASTSGLVTAISLE 793
Query: 215 SPYFNWIQDLSSFDKAF-TLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSV-GPLGS 272
F I + F +L ++G + V LV+AL+ S G+++W SV GP+
Sbjct: 794 VSSFKIIWQYEAGAPIFGSLAIHHHGGKVICCLVNGLVIALN-SHGSVVWKASVGGPI-- 850
Query: 273 AEYAPVVDSNGW---ISVGSLDGLLYSF-SPSGVL 303
+A S+G + + S DG LYSF + SG L
Sbjct: 851 --FAGACLSSGLPTQVLIPSRDGRLYSFDTTSGAL 883
>gi|22327387|ref|NP_198442.2| AMP-dependent synthetase and ligase family protein [Arabidopsis
thaliana]
gi|378548266|sp|F4K1G2.1|AEE19_ARATH RecName: Full=Putative acyl-activating enzyme 19
gi|332006646|gb|AED94029.1| AMP-dependent synthetase and ligase family protein [Arabidopsis
thaliana]
Length = 1040
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 156 THGQLLW--SAGPVLDQLGYRQGCTKTDVDC---YFTSVPVIDQCEGSIYISNTQGELYS 210
T QL+W S L L YR C + C F S P ID+ S+Y+++T G + +
Sbjct: 785 TSSQLIWCGSHDHTLYALDYRSQCCVYKLQCGGSIFAS-PAIDEGHSSLYVASTSGRVIA 843
Query: 211 LSAHSPYFN--WIQDLSS-FDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILW-HKS 266
+S F+ W+ +L + + +TP + + + + + + SG I+W +++
Sbjct: 844 VSIKDSPFHTLWLFELEAPIFGSLCITPSTQNVICCLVDGQVIAM---SPSGTIIWRYRT 900
Query: 267 VGPLGSAE-YAPVVDSNGWISVGSLDGLLYSFSP-SGVL 303
GP+ + + V+ S + V +G +YS P SG L
Sbjct: 901 GGPIFAGPCMSHVLPSQ--VLVCCRNGCVYSLEPESGCL 937
>gi|20466612|gb|AAM20623.1| unknown protein [Arabidopsis thaliana]
Length = 1040
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 156 THGQLLW--SAGPVLDQLGYRQGCTKTDVDC---YFTSVPVIDQCEGSIYISNTQGELYS 210
T QL+W S L L YR C + C F S P ID+ S+Y+++T G + +
Sbjct: 785 TSSQLIWCGSHDHTLYALDYRSQCCVYKLQCGGSIFAS-PAIDEGHSSLYVASTSGRVIA 843
Query: 211 LSAHSPYFN--WIQDLSS-FDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILW-HKS 266
+S F+ W+ +L + + +TP + + + + + + SG I+W +++
Sbjct: 844 VSIKDSPFHTLWLFELEAPIFGSLCITPSTQNVICCLVDGQVIAM---SPSGTIIWRYRT 900
Query: 267 VGPLGSAE-YAPVVDSNGWISVGSLDGLLYSFSP-SGVL 303
GP+ + + V+ S + V +G +YS P SG L
Sbjct: 901 GGPIFAGPCMSHVLPSQ--VLVCCRNGCVYSLEPESGCL 937
>gi|336416031|ref|ZP_08596369.1| hypothetical protein HMPREF1017_03477 [Bacteroides ovatus
3_8_47FAA]
gi|335939934|gb|EGN01806.1| hypothetical protein HMPREF1017_03477 [Bacteroides ovatus
3_8_47FAA]
Length = 654
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 103/264 (39%), Gaps = 61/264 (23%)
Query: 43 LIGEDGKIYACSEK----TLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAENR 98
L+ DG IY C ++A NGT W++ LD IG P G +Y +
Sbjct: 358 LVAPDGTIYQCVRNATINNVYAINPNGTQKWAIKLD--AAIGAFPALSADGVLYCLTN-- 413
Query: 99 VLKVDLLKIGTSESATQVFYGTGSGKGGTGAI--AGIAVSTSSSSVY------------- 143
K L + S A + G AI AG + +S+++Y
Sbjct: 414 --KSTLYALDASSGAIKWQQSLDGATGSAVAIDKAGNVYAGTSAAIYSFKSNKEQNWKLE 471
Query: 144 -INVKGRALFAFMTHGQLLWSA--GPVLDQLGYRQGCTK-----TDVDCYFTSVPVIDQC 195
+NV +A FA Q+L++ L + G K T D YF P+ D+
Sbjct: 472 EVNVTEQATFAL--KDQVLYATLKNGGLVAVDMTNGTKKWTYPTTKGDAYF---PIADK- 525
Query: 196 EGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNN-----------GYLYVT 244
G++Y + E S + H+ +S K + GNN G LY+
Sbjct: 526 NGNVYFT----EKGSQTVHAVN-------ASGSKIWEKNVGNNLNYSGGALSTDGILYIG 574
Query: 245 IPVRALVLALDTSSGNILWHKSVG 268
VL LD ++GNI++ ++VG
Sbjct: 575 TQSNNKVLGLDITNGNIVFEETVG 598
>gi|209694321|ref|YP_002262249.1| outer membrane protein assembly complex subunit YfgL [Aliivibrio
salmonicida LFI1238]
gi|208008272|emb|CAQ78417.1| lipoprotein precursor [Aliivibrio salmonicida LFI1238]
Length = 385
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 64/158 (40%), Gaps = 19/158 (12%)
Query: 135 VSTSSSSVYINVKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQ 194
VS S + GR A M+ GQLLW PV G +G T+ D S P+I
Sbjct: 193 VSISGGVFWGMSNGRLAAALMSKGQLLWQQ-PV----GTPKGATEIDRLVDVDSSPLI-- 245
Query: 195 CEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLAL 254
G +Y G+L +L + W ++ SS + +G + + V+A+
Sbjct: 246 LGGRLYTIGYNGQLIALDLRTGQPAWKRNYSS-----AMDMSTDGKRLFLVTEKDHVVAV 300
Query: 255 DTSSGNILWHKS-------VGPLGSAEYAPVVDSNGWI 285
D SG LW+ P+ Y + D+ G++
Sbjct: 301 DARSGTELWNNKELEYRQLTSPIIIDNYVVLADNEGYL 338
>gi|91200759|emb|CAJ73812.1| hypothetical protein kuste3056 [Candidatus Kuenenia
stuttgartiensis]
Length = 397
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 102/259 (39%), Gaps = 37/259 (14%)
Query: 39 LSKPLIGEDGKIY-ACSEKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAEN 97
+S P I DG IY C +K L A S+G + W+ +I ++P G V +E+
Sbjct: 167 ISSPAIAPDGTIYFGCWDKKLHAITSDGKLKWTQRT--ADHIVSSPAIAPDGTVCFGSED 224
Query: 98 RVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTH 157
L TSE +GT + + + + + + + F
Sbjct: 225 Y-----FLFSMTSEGKASWSFGT------RYILDASPLIRQNGDICVGSEDAKFYVFQPD 273
Query: 158 GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPY 217
GQ W+ T D+D S ID EG++Y+ + LY+ +
Sbjct: 274 GQAKWTYN------------TLYDID----SSAAIDT-EGNLYVGSGDNNLYAFTPDGK- 315
Query: 218 FNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAP 277
W ++ +N + + + V ALD +S N+ W + G + E +P
Sbjct: 316 LKWTYAARGSIRSSPAVTSDNVIYFASGDKK--VYALDQNS-NLKWSITTG--DAVESSP 370
Query: 278 VVDSNGWISVGSLDGLLYS 296
+D +G + +GS DG LY+
Sbjct: 371 CIDKDGTVYIGSNDGKLYA 389
>gi|317476648|ref|ZP_07935893.1| PQQ enzyme [Bacteroides eggerthii 1_2_48FAA]
gi|316907244|gb|EFV28953.1| PQQ enzyme [Bacteroides eggerthii 1_2_48FAA]
Length = 668
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 112/258 (43%), Gaps = 53/258 (20%)
Query: 43 LIGEDGKIYAC-SEKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAENRVLK 101
L+G+DG +Y C + ++A NG W++ LD G P G +Y + K
Sbjct: 363 LVGDDGTVYQCDATNRVYAITPNGDTKWTVQLDGAT--GAFPALSKDGVLYCLTN----K 416
Query: 102 VDLLKIGTSESATQVFYGTGSGKGGTG-AIA----GIAVSTSSSSVY------------- 143
+ L + T ++ +F T G GG G A+A G + +S ++
Sbjct: 417 ITLYALDTKDNGKILFQET-LGTGGNGSAVAVDKDGNVYAGTSLGIFFFDASGGKRFEPL 475
Query: 144 --INVKGRALFAFMTHGQLLW-----SAGPV-LDQLGYRQGCTKTD---VDCYFTSVPVI 192
+NV R FA +G L+ + G + +D + ++ T D YF P++
Sbjct: 476 TGVNVTERGSFAL--NGNHLYATLKATGGLISVDMVTGKKEWTYNSGIGTDSYF---PIV 530
Query: 193 DQCEGSIYIS-----NTQGELYSLSAHSPYFNWIQDLSSFDKAFT---LTPGNNGYLYVT 244
D+ G +Y + N +Y+++A S W +++ + ++ T +T G +GYLYV
Sbjct: 531 DK-NGVVYFTDKGAKNKNAHVYAVNA-SGNLEWSKEIGT-NQQLTYNGVTLGADGYLYVG 587
Query: 245 IPVRALVLALDTSSGNIL 262
V LDT+S L
Sbjct: 588 HSGGKKVWKLDTNSNGAL 605
>gi|421729627|ref|ZP_16168757.1| putative WD repeat-containing protein [Bacillus amyloliquefaciens
subsp. plantarum M27]
gi|407076597|gb|EKE49580.1| putative WD repeat-containing protein [Bacillus amyloliquefaciens
subsp. plantarum M27]
Length = 415
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 87/217 (40%), Gaps = 47/217 (21%)
Query: 131 AGIAVSTSSSSVYINVKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKT---------- 180
AG AV +V+I K L A+ G + W V + LG T
Sbjct: 103 AGAAVD-GDGTVFIQSKDGKLTAYHPDGTVKW----VTENLGTTYTLTPVLGTNGVIYLP 157
Query: 181 --DVDCYF---------TSVPVIDQ--------CEGSIYISNTQGELYSLSAHSPYFNWI 221
D YF TSVP+ +G++Y+S +Y++ SP W
Sbjct: 158 SHDKKLYFIDKETGNILTSVPLSGAPSSDAAIGSDGTLYVSTLDNYIYAIKPMSP-STWT 216
Query: 222 QDLS-SFDKAFTLTP--GNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPV 278
Q + P +NG LY T + A+++ +G + W K+ G Y PV
Sbjct: 217 QKWKFKTNGVVGSAPVLASNGTLY-TATYNNIFYAINSGTGQVKWSKTTSN-GFKGY-PV 273
Query: 279 VDSNGWISVGSLDGLLYSFSPSGV------LNKFSKS 309
+D +G + G+ DG LY+++ +G LN FS S
Sbjct: 274 IDRDGTVYAGNQDGNLYAYTSTGAVKWTFPLNGFSSS 310
>gi|343503631|ref|ZP_08741441.1| outer membrane protein assembly complex subunit YfgL [Vibrio
ichthyoenteri ATCC 700023]
gi|342814423|gb|EGU49367.1| outer membrane protein assembly complex subunit YfgL [Vibrio
ichthyoenteri ATCC 700023]
Length = 386
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 69/167 (41%), Gaps = 26/167 (15%)
Query: 135 VSTSSSSVYINVKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQ 194
V+ S + GR A + GQL+W +G +G T+ D + PVI
Sbjct: 193 VTVSGGVFWGTANGRLAAAIVQRGQLIWQ-----QPIGTPKGATEIDRIVDVDASPVI-- 245
Query: 195 CEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLAL 254
G +YI G+L ++ S W + S+ A L N+G + + ++A+
Sbjct: 246 LGGVLYIVGYNGQLTAIDLRSGQPAWKR---SYSSATDLA--NDGSRLFVVTDKDHIVAV 300
Query: 255 DTSSGNILW------HKSVGPLGSAEYAPVVDSNGWISVGSLDGLLY 295
D SG LW H+ V AP + N ++ VG +G LY
Sbjct: 301 DARSGTELWSNKQLEHRLV-------TAPEIIDN-YLVVGDSEGYLY 339
>gi|321313554|ref|YP_004205841.1| membrane associated protein kinase with beta-propeller domain
[Bacillus subtilis BSn5]
gi|320019828|gb|ADV94814.1| membrane associated protein kinase with beta-propeller domain
[Bacillus subtilis BSn5]
Length = 410
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 115/276 (41%), Gaps = 56/276 (20%)
Query: 43 LIGEDGKIYACS-EKTLFAFESNGTIAWSLDLDFTCNIG----TAPVHGGTGEVYIVAEN 97
+I DG +Y S + + AF +G++ W T N+G +PV G G +Y+ + +
Sbjct: 103 VIDGDGTVYLHSRDGEMKAFNPDGSVKW-----VTGNLGKTYTQSPVLGTNGVIYLASYD 157
Query: 98 RVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTH 157
+ K+ + T E T V +G + V S ++Y + + A
Sbjct: 158 K--KIYFIDKETGEILTTVPL--------SGGPSSETVIGSDGTLYFSTLDNYVHAIKPT 207
Query: 158 GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPY 217
+ W+ K + +SVPV+ + G++Y+ Y++++ +
Sbjct: 208 SKSTWTE------------RWKLKTNGVVSSVPVLAK-NGTVYVGTYNYVFYAINSGTGQ 254
Query: 218 FNWIQDLSS-------FDKAFTLTPGN-NGYLYVTIPVRALVLALDTSSGNILWHKSVGP 269
W + S+ DK + GN +G LY TS+G++ W P
Sbjct: 255 VKWSRTTSNAFKGYPVIDKDGNIYAGNQDGQLYAY-----------TSTGSLKW---TFP 300
Query: 270 L-GSAEYAPVVDSNGWISVGSLDGLLYSFSPSGVLN 304
L G + +P +D NG I +GS G L+S S +G +N
Sbjct: 301 LNGFSSSSPAIDHNGNIYIGSGSGELFSISKNGDMN 336
>gi|407071969|ref|ZP_11102807.1| outer membrane biogenesis protein BamB [Vibrio cyclitrophicus ZF14]
Length = 386
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 18/163 (11%)
Query: 135 VSTSSSSVYINVKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQ 194
V+ S + GR A + GQL+W PV G +G T+ D + PV+
Sbjct: 193 VAVSGGVFWGTANGRLAAAIVDRGQLIWQQ-PV----GTPKGATEIDRLVDVDASPVV-- 245
Query: 195 CEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLAL 254
G++Y G+L ++ + W ++ SS A L ++G + + V+A+
Sbjct: 246 LGGTLYTVGINGQLIAIDLRAGKPIWKRNYSS---AIDLA--SDGSRLFVVTDKDHVVAV 300
Query: 255 DTSSGNILWHKSVGPLGSAEY--APVVDSNGWISVGSLDGLLY 295
D SG LW PL AP + NG++ VG +G L+
Sbjct: 301 DARSGTELWST---PLLENRLLTAPAI-INGYVVVGDTEGYLH 339
>gi|298251789|ref|ZP_06975592.1| Pyrrolo-quinoline quinone [Ktedonobacter racemifer DSM 44963]
gi|297546381|gb|EFH80249.1| Pyrrolo-quinoline quinone [Ktedonobacter racemifer DSM 44963]
Length = 400
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 104/258 (40%), Gaps = 54/258 (20%)
Query: 46 EDGKIYACSEKT---LFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAENRVLKV 102
+DG +YA +T + F + G+I D + +G V+ G+ + Y+ A N
Sbjct: 107 DDGNLYAFDARTGARRWVFTTGGSI------DASPAVGNGLVYIGSSDGYVYALNADTGA 160
Query: 103 DLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRA--LFAFMT-HGQ 159
+ K TS G++ S + Y+ V G + L+AF G
Sbjct: 161 LVWKFYTSYR-------------------GVSASPTLWKDYLYVLGNSQKLYAFKALTGD 201
Query: 160 LLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFN 219
+W GY G + D S P +D G +Y+ G++ +++A + F
Sbjct: 202 FVW---------GYDTGACEEVAD----SAPAVDN--GMLYVGTCLGDVLAVNAFTGAFT 246
Query: 220 WIQDLS-SFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPV 278
W + FD A + NG +Y+ + V A S G + W G G+ +P
Sbjct: 247 WRHSVGMPFDSAPAIA---NGMVYIG-ALDHNVYAFKASDGTLAWSYRTG--GAVGASPA 300
Query: 279 VDSNGWISVGSLDGLLYS 296
V +NG + VGS D Y+
Sbjct: 301 V-ANGIVYVGSNDDRFYA 317
Score = 38.9 bits (89), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 7/104 (6%)
Query: 199 IYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPG-NNGYLYVTIPVRALVLALDTS 257
+Y+ +LY+ A + F W D + ++ P +NG LYV + VLA++
Sbjct: 183 LYVLGNSQKLYAFKALTGDFVWGYDTGACEEVADSAPAVDNGMLYVGTCL-GDVLAVNAF 241
Query: 258 SGNILWHKSVG-PLGSAEYAPVVDSNGWISVGSLDGLLYSFSPS 300
+G W SVG P SA P + +NG + +G+LD +Y+F S
Sbjct: 242 TGAFTWRHSVGMPFDSA---PAI-ANGMVYIGALDHNVYAFKAS 281
>gi|307353363|ref|YP_003894414.1| PKD domain-containing protein [Methanoplanus petrolearius DSM
11571]
gi|307156596|gb|ADN35976.1| PKD domain containing protein [Methanoplanus petrolearius DSM
11571]
Length = 2237
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 115/268 (42%), Gaps = 40/268 (14%)
Query: 39 LSKPLIGEDGKIYACSEKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAENR 98
++ P IG +G IY+ + A +GTI W+ L + + +P G G +Y+ ++++
Sbjct: 482 ITSPAIGPNGIIYSAYKSNFNAIYPDGTIKWNTTLGASVSY-NSPAIGSDGTIYVGSDDK 540
Query: 99 VLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTHG 158
+L I + + + Y TG K T G+ ++Y+ AL+A
Sbjct: 541 ----NLYAINPDDGSVKWNYSTGD-KIRTSPAIGL-----DGTIYVGSSDGALYAINPDK 590
Query: 159 QLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSP-- 216
+ W + D D + S PVI +G+IYI + L L A +P
Sbjct: 591 TVKW----IYD------ANNNYGADFKYCS-PVI-GPDGTIYIGSYGDSL--LFAINPDG 636
Query: 217 YFNWIQDLSSFDKAFTLTPGNNGYLY-----VTIPVRALVLALDTSSGNILWHKSVGPLG 271
W D + K+ T+ GN+G +Y + + A++ +I W PL
Sbjct: 637 TEKWTLDTEKYVKSITI--GNDGTIYFGSYTSASTTSSFIYAVNPDK-SIKWKL---PLA 690
Query: 272 SAEY-APVVDSNGWISVGSL-DGLLYSF 297
Y +P +DS+G + +GS +G LY+
Sbjct: 691 DNWYSSPTIDSDGTLYIGSYANGNLYAI 718
>gi|154688089|ref|YP_001423250.1| hypothetical protein RBAM_036900 [Bacillus amyloliquefaciens FZB42]
gi|154353940|gb|ABS76019.1| YxaL [Bacillus amyloliquefaciens FZB42]
Length = 415
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 87/217 (40%), Gaps = 47/217 (21%)
Query: 131 AGIAVSTSSSSVYINVKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKT---------- 180
AG AV +V+I K L A+ G + W V + LG T
Sbjct: 103 AGAAVD-GDGTVFIQSKDGKLTAYHPDGTVKW----VTENLGTTYTLTPVLGTNGVIYLP 157
Query: 181 --DVDCYF---------TSVPVIDQ--------CEGSIYISNTQGELYSLSAHSPYFNWI 221
D YF TSVP+ +G++Y+S +Y++ SP W
Sbjct: 158 SHDKKLYFIDKETGNILTSVPLSGAPSSDAAIGSDGTLYVSTLDNYIYAIKPTSP-STWT 216
Query: 222 QDLS-SFDKAFTLTP--GNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPV 278
Q + P +NG LY T + A+++ +G + W K+ G Y PV
Sbjct: 217 QKWKFKTNGVVGSAPVLASNGTLY-TATYNNIFYAINSGTGQVKWSKTTSN-GFKGY-PV 273
Query: 279 VDSNGWISVGSLDGLLYSFSPSGV------LNKFSKS 309
+D +G + G+ DG LY+++ +G LN FS S
Sbjct: 274 IDRDGTVYAGNQDGNLYAYTSTGAVKWTFPLNGFSSS 310
>gi|452857581|ref|YP_007499264.1| membrane associated protein kinase with beta-propeller domain
[Bacillus amyloliquefaciens subsp. plantarum UCMB5036]
gi|452081841|emb|CCP23614.1| membrane associated protein kinase with beta-propeller domain
[Bacillus amyloliquefaciens subsp. plantarum UCMB5036]
Length = 415
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 87/217 (40%), Gaps = 47/217 (21%)
Query: 131 AGIAVSTSSSSVYINVKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKT---------- 180
AG AV +V+I K L A+ G + W V + LG T
Sbjct: 103 AGAAVD-GDGTVFIQSKDGKLTAYHPDGTVKW----VTENLGTTYTLTPVLGTNGVIYLP 157
Query: 181 --DVDCYF---------TSVPVIDQ--------CEGSIYISNTQGELYSLSAHSPYFNWI 221
D YF TSVP+ +G++Y+S +Y++ SP W
Sbjct: 158 SHDKKLYFIDKETGNILTSVPLSGAPSSDAAIGSDGTLYVSTLDNYIYAIKPTSP-STWT 216
Query: 222 QDLS-SFDKAFTLTP--GNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPV 278
Q + P +NG LY T + A+++ +G + W K+ G Y PV
Sbjct: 217 QKWKFKTNGVVGSAPVLASNGTLY-TATYNNIFYAINSGTGQVKWSKTTSN-GFKGY-PV 273
Query: 279 VDSNGWISVGSLDGLLYSFSPSGV------LNKFSKS 309
+D +G + G+ DG LY+++ +G LN FS S
Sbjct: 274 IDRDGTVYAGNQDGNLYAYTSTGAVKWTFPLNGFSSS 310
>gi|423295727|ref|ZP_17273854.1| hypothetical protein HMPREF1070_02519 [Bacteroides ovatus
CL03T12C18]
gi|392671455|gb|EIY64927.1| hypothetical protein HMPREF1070_02519 [Bacteroides ovatus
CL03T12C18]
Length = 654
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 103/264 (39%), Gaps = 61/264 (23%)
Query: 43 LIGEDGKIYACSEK----TLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAENR 98
L+ DG IY C ++A NGT W++ LD IG P G +Y +
Sbjct: 358 LVAPDGTIYQCVRNATINNVYAINPNGTQKWAVKLD--AAIGAFPALSADGVLYCLTN-- 413
Query: 99 VLKVDLLKIGTSESATQVFYGTGSGKGGTGAI--AGIAVSTSSSSVY------------- 143
K L + S A + G AI AG + +S+++Y
Sbjct: 414 --KSTLYALDASSGAIKWQQSLDGATGSAVAIDKAGNVYAGTSAAIYSFKPNKEQNWKLE 471
Query: 144 -INVKGRALFAFMTHGQLLWSA--GPVLDQLGYRQGCTK-----TDVDCYFTSVPVIDQC 195
+NV +A FA Q+L++ L + G K T D YF P+ D+
Sbjct: 472 EVNVTEQATFAL--KDQVLYATLKNGGLVAVDMTNGTKKWTYPTTKGDAYF---PIADK- 525
Query: 196 EGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNN-----------GYLYVT 244
G++Y + E S + H+ +S K + GNN G LY+
Sbjct: 526 NGNVYFT----EKGSQTVHAVN-------ASGSKIWEKNVGNNLNYSGGALSTDGILYIG 574
Query: 245 IPVRALVLALDTSSGNILWHKSVG 268
VL LD ++GNI++ ++VG
Sbjct: 575 TQSNNKVLGLDITNGNIVFEETVG 598
>gi|375364395|ref|YP_005132434.1| putative WD repeat-containing protein [Bacillus amyloliquefaciens
subsp. plantarum CAU B946]
gi|451344884|ref|YP_007443515.1| putative WD repeat-containing protein [Bacillus amyloliquefaciens
IT-45]
gi|371570389|emb|CCF07239.1| putative WD repeat-containing protein [Bacillus amyloliquefaciens
subsp. plantarum CAU B946]
gi|449848642|gb|AGF25634.1| putative WD repeat-containing protein [Bacillus amyloliquefaciens
IT-45]
Length = 415
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 87/217 (40%), Gaps = 47/217 (21%)
Query: 131 AGIAVSTSSSSVYINVKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKT---------- 180
AG AV +V+I K L A+ G + W V + LG T
Sbjct: 103 AGAAVD-GDGTVFIQSKDGKLTAYHPDGTVKW----VTENLGTTYTLTPVLGTNGVIYLP 157
Query: 181 --DVDCYF---------TSVPVIDQ--------CEGSIYISNTQGELYSLSAHSPYFNWI 221
D YF TSVP+ +G++Y+S +Y++ SP W
Sbjct: 158 SHDKKLYFIDKETGNILTSVPLSGAPSSDAAIGSDGTLYVSTLDNYIYAIKPTSP-STWT 216
Query: 222 QDLS-SFDKAFTLTP--GNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPV 278
Q + P +NG LY T + A+++ +G + W K+ G Y PV
Sbjct: 217 QKWKFKTNGVVGSAPVLASNGTLY-TATYNNIFYAINSGTGQVKWSKTTSN-GFKGY-PV 273
Query: 279 VDSNGWISVGSLDGLLYSFSPSGV------LNKFSKS 309
+D +G + G+ DG LY+++ +G LN FS S
Sbjct: 274 IDRDGTVYAGNQDGNLYAYTSTGAVKWTFPLNGFSSS 310
>gi|418030764|ref|ZP_12669249.1| hypothetical protein BSSC8_01930 [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|351471823|gb|EHA31936.1| hypothetical protein BSSC8_01930 [Bacillus subtilis subsp. subtilis
str. SC-8]
Length = 404
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 115/276 (41%), Gaps = 56/276 (20%)
Query: 43 LIGEDGKIYACS-EKTLFAFESNGTIAWSLDLDFTCNIG----TAPVHGGTGEVYIVAEN 97
+I DG +Y S + + AF +G++ W T N+G +PV G G +Y+ + +
Sbjct: 97 VIDGDGTVYLHSRDGEMKAFNPDGSVKW-----VTGNLGKTYTQSPVLGTNGVIYLASYD 151
Query: 98 RVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTH 157
+ K+ + T E T V +G + V S ++Y + + A
Sbjct: 152 K--KIYFIDKETGEILTTVPL--------SGGPSSETVIGSDGTLYFSTLDNYVHAIKPT 201
Query: 158 GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPY 217
+ W+ K + +SVPV+ + G++Y+ Y++++ +
Sbjct: 202 SKSTWTE------------RWKLKTNGVVSSVPVLAK-NGTVYVGTYNYVFYAINSGTGQ 248
Query: 218 FNWIQDLSS-------FDKAFTLTPGN-NGYLYVTIPVRALVLALDTSSGNILWHKSVGP 269
W + S+ DK + GN +G LY TS+G++ W P
Sbjct: 249 VKWSRTTSNAFKGYPVIDKDGNIYAGNQDGQLYAY-----------TSTGSLKW---TFP 294
Query: 270 L-GSAEYAPVVDSNGWISVGSLDGLLYSFSPSGVLN 304
L G + +P +D NG I +GS G L+S S +G +N
Sbjct: 295 LNGFSSSSPAIDHNGNIYIGSGSGELFSISKNGDMN 330
>gi|387900644|ref|YP_006330940.1| cobaltochelatase [Bacillus amyloliquefaciens Y2]
gi|387174754|gb|AFJ64215.1| cobaltochelatase [Bacillus amyloliquefaciens Y2]
Length = 442
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 87/217 (40%), Gaps = 47/217 (21%)
Query: 131 AGIAVSTSSSSVYINVKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKT---------- 180
AG AV +V+I K L A+ G + W V + LG T
Sbjct: 94 AGAAVD-GDGTVFIQSKDGKLTAYHPDGTVKW----VTENLGTTYTLTPVLGTNGVIYLP 148
Query: 181 --DVDCYF---------TSVPVIDQ--------CEGSIYISNTQGELYSLSAHSPYFNWI 221
D YF TSVP+ +G++Y+S +Y++ SP W
Sbjct: 149 SHDKKLYFIDKETGNILTSVPLSGAPSSDAAIGSDGTLYVSTLDNYIYAIKPTSPS-TWT 207
Query: 222 QDLS-SFDKAFTLTP--GNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPV 278
Q + P +NG LY T + A+++ +G + W K+ G Y PV
Sbjct: 208 QKWKFKTNGVVGSAPVLASNGTLY-TATYNNIFYAINSGTGQVKWSKTTSN-GFKGY-PV 264
Query: 279 VDSNGWISVGSLDGLLYSFSPSGV------LNKFSKS 309
+D +G + G+ DG LY+++ +G LN FS S
Sbjct: 265 IDRDGTVYAGNQDGNLYAYTSTGAVKWTFPLNGFSSS 301
>gi|299146357|ref|ZP_07039425.1| cell surface protein [Bacteroides sp. 3_1_23]
gi|298516848|gb|EFI40729.1| cell surface protein [Bacteroides sp. 3_1_23]
Length = 654
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 104/264 (39%), Gaps = 61/264 (23%)
Query: 43 LIGEDGKIYAC----SEKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAENR 98
L+ DG IY C + ++A NGT W++ LD IG P G +Y +
Sbjct: 358 LVAPDGTIYQCVRNATINNVYAINPNGTQKWAVKLD--AAIGAFPALSADGVLYCLTN-- 413
Query: 99 VLKVDLLKIGTSESATQVFYGTGSGKGGTGAI--AGIAVSTSSSSVY------------- 143
K L + S A + G AI AG + +S+++Y
Sbjct: 414 --KSTLYALDASSGAIKWQQSLDGATGSAVAIDKAGNVYAGTSAAIYSFKSNKEQNWKLE 471
Query: 144 -INVKGRALFAFMTHGQLLWSA--GPVLDQLGYRQGCTK-----TDVDCYFTSVPVIDQC 195
+NV +A FA Q+L++ L + G K T D YF P+ D+
Sbjct: 472 EVNVTEQATFAL--KDQVLYATLKNGGLVAVDMTNGTKKWTYPTTKGDAYF---PIADK- 525
Query: 196 EGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNN-----------GYLYVT 244
G++Y + E S + H+ +S K + GNN G LY+
Sbjct: 526 NGNVYFT----EKGSQTVHAVN-------ASGSKIWEKNVGNNLNYSGGALSTDGILYIG 574
Query: 245 IPVRALVLALDTSSGNILWHKSVG 268
VL LD ++GNI++ ++VG
Sbjct: 575 TQSNNKVLGLDITNGNIVFEETVG 598
>gi|183599735|ref|ZP_02961228.1| hypothetical protein PROSTU_03238 [Providencia stuartii ATCC 25827]
gi|386741986|ref|YP_006215165.1| outer membrane biogenesis protein BamB [Providencia stuartii MRSN
2154]
gi|188021994|gb|EDU60034.1| outer membrane assembly lipoprotein YfgL [Providencia stuartii ATCC
25827]
gi|384478679|gb|AFH92474.1| outer membrane biogenesis protein BamB [Providencia stuartii MRSN
2154]
Length = 390
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 108/275 (39%), Gaps = 56/275 (20%)
Query: 39 LSKPLIGEDGKIYACSEK-TLFAF-ESNGTIAWSLDLDF------TCNIGTAPVHGGTGE 90
LS L IY +E+ T+ A + +G++ W +++ N G VH G
Sbjct: 109 LSGGLTVSGNHIYIGTERGTVIALNKEDGSVVWDVEVAGEALSRPVANDGLVIVHTSNGM 168
Query: 91 VYIVAENR-----VLKVDLLKIG-TSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYI 144
+ + EN + +D + ESA + YG AI G
Sbjct: 169 LQALDENSGEIKWTVNMDTPSLSLRGESAPSIAYGA--------AIVG------------ 208
Query: 145 NVKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDV----DCYFTSVPVIDQCEGSIY 200
GR ++ GQL+W Q Q + T++ D T P+ID +G+IY
Sbjct: 209 GDNGRVSAVLLSQGQLIW-------QQRISQVTSSTEIGRLDDVDMT--PIID--DGTIY 257
Query: 201 ISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGN 260
G L +L S W +DL S + + G N YL + VL++ S G
Sbjct: 258 AIAYNGTLAALDMRSGQIKWKRDLGSVNN--MVLSGENLYL---VDQNDRVLSVRKSDGV 312
Query: 261 ILWHKSVGPLGSAEYAPVVDSNGWISVGSLDGLLY 295
LW + L AP + NG++ VG +G L+
Sbjct: 313 TLWTQE-DLLNRGLSAPEM-YNGYLVVGDKEGYLH 345
>gi|160883277|ref|ZP_02064280.1| hypothetical protein BACOVA_01246 [Bacteroides ovatus ATCC 8483]
gi|383115059|ref|ZP_09935818.1| hypothetical protein BSGG_0766 [Bacteroides sp. D2]
gi|156111261|gb|EDO13006.1| PQQ enzyme repeat protein [Bacteroides ovatus ATCC 8483]
gi|313693231|gb|EFS30066.1| hypothetical protein BSGG_0766 [Bacteroides sp. D2]
Length = 654
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 103/264 (39%), Gaps = 61/264 (23%)
Query: 43 LIGEDGKIYACSEK----TLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAENR 98
L+ DG IY C ++A NGT W++ LD IG P G +Y +
Sbjct: 358 LVAPDGTIYQCVRNATINNVYAINPNGTQKWAVKLD--AAIGAFPALSADGVLYCLTN-- 413
Query: 99 VLKVDLLKIGTSESATQVFYGTGSGKGGTGAI--AGIAVSTSSSSVY------------- 143
K L + S A + G AI AG + +S+++Y
Sbjct: 414 --KSTLYALDASSGAIKWQQSLDGATGSAVAIDKAGNVYAGTSAAIYSFKPNKEQNWKLE 471
Query: 144 -INVKGRALFAFMTHGQLLWSA--GPVLDQLGYRQGCTK-----TDVDCYFTSVPVIDQC 195
+NV +A FA Q+L++ L + G K T D YF P+ D+
Sbjct: 472 EVNVTEQATFAL--KDQVLYATLKNGGLVAVDMTNGTKKWTYPTTKGDAYF---PIADK- 525
Query: 196 EGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNN-----------GYLYVT 244
G++Y + E S + H+ +S K + GNN G LY+
Sbjct: 526 NGNVYFT----EKGSQTVHAVN-------ASGSKIWEKNVGNNLNYSGGALSTDGILYIG 574
Query: 245 IPVRALVLALDTSSGNILWHKSVG 268
VL LD ++GNI++ ++VG
Sbjct: 575 TQSNNKVLGLDITNGNIVFEETVG 598
>gi|444426826|ref|ZP_21222230.1| outer membrane biogenesis protein BamB [Vibrio campbellii CAIM 519
= NBRC 15631]
gi|444239924|gb|ELU51477.1| outer membrane biogenesis protein BamB [Vibrio campbellii CAIM 519
= NBRC 15631]
Length = 386
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 66/153 (43%), Gaps = 22/153 (14%)
Query: 147 KGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQG 206
GR A + GQL+W PV G +G T+ D S PV+ G+++ G
Sbjct: 205 NGRLAAAIVERGQLIWQQ-PV----GTPKGATEIDRLVDVDSSPVV--LGGTLFTIGYNG 257
Query: 207 ELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKS 266
+L ++ S W ++ SS + T +G I + V+A+D SG LW S
Sbjct: 258 QLIAIDLRSANPIWKRNYSSANDIAT-----DGSRIFVITEKDHVVAVDARSGTELWENS 312
Query: 267 VGPLGSAEY----APVVDSNGWISVGSLDGLLY 295
EY APV+ N ++ VG G L+
Sbjct: 313 -----QLEYRQLTAPVIVDN-YLVVGDTLGYLH 339
>gi|119775496|ref|YP_928236.1| outer membrane protein assembly complex subunit YfgL [Shewanella
amazonensis SB2B]
gi|119767996|gb|ABM00567.1| PQQ enzyme repeat domain protein [Shewanella amazonensis SB2B]
Length = 395
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 104/269 (38%), Gaps = 42/269 (15%)
Query: 38 RLSKPLIGEDGKIYACSEKTLFAF--ESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVA 95
RL+ + GK++ E L A G + WS+ + + +AP GE +V
Sbjct: 112 RLASGMTAARGKVFVGGESGLLAALDAETGAVVWSVQA--SGELLSAPT---VGENTVVV 166
Query: 96 ENRVLKVDLLKIGTSES--------ATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVK 147
+D + T E GTG+ G G V T+ V + VK
Sbjct: 167 NASSGSLDAFDVDTGEKRWSYENALPNLTLRGTGAAAFMAG---GFFVGTADGKVAVVVK 223
Query: 148 GRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGE 207
+GQ W P+ G + DVD T +PV D ++Y + G
Sbjct: 224 --------DNGQPAWEQ-PIYTPKGGNEFSRMADVD--MTPLPVGD----NLYAVSYNGN 268
Query: 208 LYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSV 267
L S+ S W + SSF++ +G + + + ALD +G LW S
Sbjct: 269 LVSMEMRSGRVLWTRKYSSFNELAA-----SGVQLYLVADSSRIYALDRRNGLELWSNS- 322
Query: 268 GPLGSAEY-APVVDSNGWISVGSLDGLLY 295
L + E +PVV N ++ VG +G L+
Sbjct: 323 -ELANRELTSPVVFDN-YLVVGDFEGYLH 349
>gi|223938199|ref|ZP_03630095.1| Pyrrolo-quinoline quinone [bacterium Ellin514]
gi|223893071|gb|EEF59536.1| Pyrrolo-quinoline quinone [bacterium Ellin514]
Length = 366
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 106/262 (40%), Gaps = 39/262 (14%)
Query: 29 KVPYRRSAFRLSKPLIGEDGKIYACS-EKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGG 87
K +R + S P I DG I+ S +K +A +SNG W ++ I ++PV
Sbjct: 107 KWHFRTGGWVDSSPAIAADGTIFFGSWDKAFYAIDSNGKQKWKMETG--GPIDSSPVISA 164
Query: 88 TGEVYIVAENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVK 147
G VYI + ++ L G + A + KG A IA+ ++YI+
Sbjct: 165 DGTVYIGSHDQKFYA-LTPDGKLKWAFET-------KGPIVASPAIAMD---GTIYISSV 213
Query: 148 GRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGE 207
L+A G + W + G T+T S PV+D+ +G IYI
Sbjct: 214 DGNLYALNPDGSMKWK---------FHTGGTRT-------SSPVLDK-DGIIYI-GVNNF 255
Query: 208 LYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSV 267
YS+ P D + D + +NG V + L S I W+ ++
Sbjct: 256 YYSIK---PDGTKNADFGNDDFDGSAAVMDNGV--VVFGSQQGTLYAFNSQFEIQWYLAL 310
Query: 268 GPLGSAEYAPVVDSNGWISVGS 289
G G+ +P + SNG I VGS
Sbjct: 311 G--GAMTCSPTISSNGMIYVGS 330
>gi|429507268|ref|YP_007188452.1| WD repeat-containing protein [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|429488858|gb|AFZ92782.1| putative WD repeat-containing protein [Bacillus amyloliquefaciens
subsp. plantarum AS43.3]
Length = 433
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 87/217 (40%), Gaps = 47/217 (21%)
Query: 131 AGIAVSTSSSSVYINVKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKT---------- 180
AG AV +V+I K L A+ G + W V + LG T
Sbjct: 103 AGAAVD-GDGTVFIQSKDGKLTAYHPDGTVKW----VTENLGTTYTLTPVLGTNGVIYLP 157
Query: 181 --DVDCYF---------TSVPVIDQ--------CEGSIYISNTQGELYSLSAHSPYFNWI 221
D YF TSVP+ +G++Y+S +Y++ SP W
Sbjct: 158 SHDKKLYFIDKETGNILTSVPLSGAPSSDAAIGSDGTLYVSTLDNYIYAIKPTSPS-TWT 216
Query: 222 QDLS-SFDKAFTLTP--GNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPV 278
Q + P +NG LY T + A+++ +G + W K+ G Y PV
Sbjct: 217 QKWKFKTNGVVGSAPVLASNGTLY-TATYNNIFYAINSGTGQVKWSKTTSN-GFKGY-PV 273
Query: 279 VDSNGWISVGSLDGLLYSFSPSGV------LNKFSKS 309
+D +G + G+ DG LY+++ +G LN FS S
Sbjct: 274 IDRDGTVYAGNQDGNLYAYTSTGAVKWTFPLNGFSSS 310
>gi|385266904|ref|ZP_10044991.1| PQQ enzyme repeat protein [Bacillus sp. 5B6]
gi|385151400|gb|EIF15337.1| PQQ enzyme repeat protein [Bacillus sp. 5B6]
Length = 414
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 87/217 (40%), Gaps = 47/217 (21%)
Query: 131 AGIAVSTSSSSVYINVKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKT---------- 180
AG AV +V+I K L A+ G + W V + LG T
Sbjct: 103 AGAAVD-GDGTVFIQSKDGKLTAYHPDGTVKW----VTENLGTTYTLTPVLGTNGVIYLP 157
Query: 181 --DVDCYF---------TSVPVIDQ--------CEGSIYISNTQGELYSLSAHSPYFNWI 221
D YF TSVP+ +G++Y+S +Y++ SP W
Sbjct: 158 SHDKKLYFIDKETGNILTSVPLSGAPSSDAAIGSDGTLYVSTLDNYIYAIKPTSP-STWT 216
Query: 222 QDLS-SFDKAFTLTP--GNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPV 278
Q + P +NG LY T + A+++ +G + W K+ G Y PV
Sbjct: 217 QKWKFKTNGVVGSAPVLASNGTLY-TATYNNIFYAINSGTGQVKWSKTTSN-GFKGY-PV 273
Query: 279 VDSNGWISVGSLDGLLYSFSPSGV------LNKFSKS 309
+D +G + G+ DG LY+++ +G LN FS S
Sbjct: 274 IDRDGTVYAGNQDGNLYAYTSTGAVKWTFPLNGFSSS 310
>gi|394991532|ref|ZP_10384333.1| YxaL [Bacillus sp. 916]
gi|393807558|gb|EJD68876.1| YxaL [Bacillus sp. 916]
Length = 415
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 87/217 (40%), Gaps = 47/217 (21%)
Query: 131 AGIAVSTSSSSVYINVKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKT---------- 180
AG AV +V+I K L A+ G + W V + LG T
Sbjct: 103 AGAAVD-RDGTVFIQSKDGKLTAYHPDGTVKW----VTENLGTTYTLTPVLGTNGVIYLP 157
Query: 181 --DVDCYF---------TSVPVIDQ--------CEGSIYISNTQGELYSLSAHSPYFNWI 221
D YF TSVP+ +G++Y+S +Y++ SP W
Sbjct: 158 SHDKKLYFIDKETGNILTSVPLSGAPSSDAAIGSDGTLYVSTLDNYIYAIKPTSP-STWT 216
Query: 222 QDLS-SFDKAFTLTP--GNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPV 278
Q + P +NG LY T + A+++ +G + W K+ G Y PV
Sbjct: 217 QKWKFKTNGVVGSAPVLASNGTLY-TATYNNIFYAINSGTGQVKWSKTTSN-GFKGY-PV 273
Query: 279 VDSNGWISVGSLDGLLYSFSPSGV------LNKFSKS 309
+D +G + G+ DG LY+++ +G LN FS S
Sbjct: 274 IDRDGTVYAGNQDGNLYAYTSTGAVKWTFPLNGFSSS 310
>gi|388601635|ref|ZP_10160031.1| outer membrane biogenesis protein BamB [Vibrio campbellii DS40M4]
Length = 386
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 66/153 (43%), Gaps = 22/153 (14%)
Query: 147 KGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQG 206
GR A + GQL+W PV G +G T+ D S PV+ G+++ G
Sbjct: 205 NGRLAAAIVERGQLIWQQ-PV----GTPKGATEIDRLVDVDSSPVV--LGGTLFTIGYNG 257
Query: 207 ELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKS 266
+L ++ S W ++ SS + T +G I + V+A+D SG LW S
Sbjct: 258 QLIAIDLRSANPIWKRNYSSANDIAT-----DGSRIFVITEKDHVVAVDARSGTELWENS 312
Query: 267 VGPLGSAEY----APVVDSNGWISVGSLDGLLY 295
EY APV+ N ++ VG G L+
Sbjct: 313 -----QLEYRQLTAPVIVDN-YLVVGDTLGYLH 339
>gi|423287769|ref|ZP_17266620.1| hypothetical protein HMPREF1069_01663 [Bacteroides ovatus
CL02T12C04]
gi|392671784|gb|EIY65255.1| hypothetical protein HMPREF1069_01663 [Bacteroides ovatus
CL02T12C04]
Length = 654
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 104/264 (39%), Gaps = 61/264 (23%)
Query: 43 LIGEDGKIYAC----SEKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAENR 98
L+ DG IY C + ++A NGT W++ LD IG P G +Y +
Sbjct: 358 LVAPDGTIYQCVRNATINNVYAINPNGTQKWAVKLD--AAIGAFPALSADGVLYCLTN-- 413
Query: 99 VLKVDLLKIGTSESATQVFYGTGSGKGGTGAI--AGIAVSTSSSSVY------------- 143
K L + S A + G AI AG + +S+++Y
Sbjct: 414 --KSTLYALDASSGAIKWQQSLDGATGSAVAIDKAGNVYAGTSAAIYSFKPNKEQNWKLE 471
Query: 144 -INVKGRALFAFMTHGQLLWSA--GPVLDQLGYRQGCTK-----TDVDCYFTSVPVIDQC 195
+NV +A FA Q+L++ L + G K T D YF P+ D+
Sbjct: 472 EVNVTEQATFAL--KDQVLYATLKNGGLVAVDMTNGTKKWTYPTTKGDAYF---PIADK- 525
Query: 196 EGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNN-----------GYLYVT 244
G++Y + E S + H+ +S K + GNN G LY+
Sbjct: 526 NGNVYFT----EKGSQTVHAVN-------ASGSKIWEKNVGNNLNYSGGALSTDGILYIG 574
Query: 245 IPVRALVLALDTSSGNILWHKSVG 268
VL LD ++GNI++ ++VG
Sbjct: 575 TQSNNKVLGLDITNGNIVFEETVG 598
>gi|333986268|ref|YP_004518875.1| pyrrolo-quinoline quinone repeat-containing protein
[Methanobacterium sp. SWAN-1]
gi|333824412|gb|AEG17074.1| Pyrrolo-quinoline quinone repeat-containing protein
[Methanobacterium sp. SWAN-1]
Length = 412
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 77/168 (45%), Gaps = 24/168 (14%)
Query: 148 GRALFAFMTHGQLLWSAGPVLDQLG--------YRQGCTKTDVDCYFT------SVPVID 193
G L+ + T G ++ S V D L Y Q T DV + S P +D
Sbjct: 91 GTNLWDYKTGGAIISSPAIVNDTLYIGSTDGYLYAQDTTNGDVKWKYKTGNSIESSPAVD 150
Query: 194 QCEGSIYISNTQGELYSLSAHSPYFNW-IQDLSSFDKAFTLTPGNNGYLYVTIPVRALVL 252
G++YI + G +Y+++A + +W + ++ A T+ +G LYV V
Sbjct: 151 G--GNVYIGSDDGRIYAINASNGTMDWEYETGNAVKSAPTVV---DGVLYVGSD-DDKVY 204
Query: 253 ALDTSSGNILWHKSVGPLGSAEYAPVVDSNGWISVGSLDGLLYSFSPS 300
A+ T +G LW + G + +P V SNG + VGS DG +Y+ + +
Sbjct: 205 AISTKNGTKLWEYTTGD--KIKSSPAV-SNGIVYVGSGDGKVYALNAT 249
>gi|153833498|ref|ZP_01986165.1| lipoprotein YfgL [Vibrio harveyi HY01]
gi|156973383|ref|YP_001444290.1| outer membrane protein assembly complex subunit YfgL [Vibrio
harveyi ATCC BAA-1116]
gi|148870149|gb|EDL69090.1| lipoprotein YfgL [Vibrio harveyi HY01]
gi|156524977|gb|ABU70063.1| hypothetical protein VIBHAR_01070 [Vibrio harveyi ATCC BAA-1116]
Length = 386
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 66/153 (43%), Gaps = 22/153 (14%)
Query: 147 KGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQG 206
GR A + GQL+W PV G +G T+ D S PV+ G+++ G
Sbjct: 205 NGRLAAAIVERGQLIWQQ-PV----GTPKGATEIDRLVDVDSSPVV--LGGTLFTIGYNG 257
Query: 207 ELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKS 266
+L ++ S W ++ SS + T +G I + V+A+D SG LW S
Sbjct: 258 QLIAIDLRSANPIWKRNYSSANDIAT-----DGSRIFVITEKDHVVAVDARSGTELWENS 312
Query: 267 VGPLGSAEY----APVVDSNGWISVGSLDGLLY 295
EY APV+ N ++ VG G L+
Sbjct: 313 -----KLEYRQLTAPVIVDN-YLVVGDTLGYLH 339
>gi|386002046|ref|YP_005920345.1| Cobaltochelatase CobN subunit [Methanosaeta harundinacea 6Ac]
gi|357210102|gb|AET64722.1| Cobaltochelatase CobN subunit [Methanosaeta harundinacea 6Ac]
Length = 508
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 12/117 (10%)
Query: 187 TSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIP 246
TS P I G +YI G L L+A W ++ S ++ L G+ YL
Sbjct: 274 TSSPAI--SSGRVYIGTDDGRLACLNASDGSLVWSAEVDSSVRSSPLVAGDRVYLGSH-- 329
Query: 247 VRALVLALDTSSGNILWHKSVGP--LGSAEYAPVVDSNGWISVGSLDGLLYSFSPSG 301
R +V AL+ S G+ +W G + S + S+G + +GS DG LY+F G
Sbjct: 330 -RGVVYALNRSDGSEVWRYETGAYLMSSPSF-----SDGVLYIGSDDGCLYAFGEEG 380
>gi|424045073|ref|ZP_17782640.1| outer membrane assembly lipoprotein YfgL [Vibrio cholerae HENC-03]
gi|408886927|gb|EKM25577.1| outer membrane assembly lipoprotein YfgL [Vibrio cholerae HENC-03]
Length = 386
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 66/153 (43%), Gaps = 22/153 (14%)
Query: 147 KGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQG 206
GR A + GQL+W PV G +G T+ D S P++ G+++ G
Sbjct: 205 NGRLAAAIVERGQLIWQQ-PV----GTPKGATEIDRLVDVDSSPIV--LGGTLFTVGYNG 257
Query: 207 ELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKS 266
+L ++ S W ++ SS + T +G I + V+A+D SG LW S
Sbjct: 258 QLIAIDLRSANPIWKRNYSSANDIAT-----DGSRIFVITEKDHVVAVDARSGTELWENS 312
Query: 267 VGPLGSAEY----APVVDSNGWISVGSLDGLLY 295
EY APV+ N ++ VG G L+
Sbjct: 313 -----KLEYRQLTAPVIVDN-YLVVGDTLGYLH 339
>gi|20093373|ref|NP_619448.1| cell surface protein [Methanosarcina acetivorans C2A]
gi|19918740|gb|AAM07928.1| cell surface protein [Methanosarcina acetivorans C2A]
Length = 1357
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 110/285 (38%), Gaps = 62/285 (21%)
Query: 43 LIGEDGKIYACSEK-TLFAFESNGTIAWSLDLDFTCNIGT----APVHGGTGEVYIVAEN 97
+IG DG +Y TL+A NGT+ W +IGT P G +Y +
Sbjct: 665 VIGSDGTMYIGDRSGTLYAINPNGTLKWG------TSIGTKSFPTPAIASDGTIYAGGND 718
Query: 98 RVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTH 157
+++ + G+ + + V GT ++ S ++Y LFA
Sbjct: 719 KIVYA-INPDGSIKWSYPV---------GTKSVISSPAIASDGTIYF-ATSTNLFALKPD 767
Query: 158 GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPY 217
G L W++ + GY YF+ P I +G+IY+ G L +++A
Sbjct: 768 GTLKWNS--AVSYGGYN----------YFS--PAI-GSDGTIYLGTYGGALSAINADGT- 811
Query: 218 FNWIQDLSSFDKAFTLTPGNNGYLYVTIPV-----------RALVLALDTSSGNILWHKS 266
W + P N Y+Y T + A + AL+ G + W S
Sbjct: 812 LKWTYSI----------PAPNNYIYDTPAIASDGTIYFGCNNANLYALN-PDGTLKWTYS 860
Query: 267 VGPLGSA--EYAPVVDSNGWISVGSLDGLLYSFSPSGVLNKFSKS 309
VG S + +P + S+G I GS + Y+ P G L SK+
Sbjct: 861 VGTSASQAIKSSPAIGSDGTIYFGSNNQYFYALYPDGTLKWSSKA 905
>gi|421834882|ref|ZP_16269805.1| tail fiber protein [Clostridium botulinum CFSAN001627]
gi|409743587|gb|EKN42489.1| tail fiber protein [Clostridium botulinum CFSAN001627]
Length = 561
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 107/255 (41%), Gaps = 46/255 (18%)
Query: 48 GKIYACSEKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIV--AENRVLKVDLL 105
GKIY S K L + +G I W +T + V G VYI NR++K++
Sbjct: 304 GKIYCKSTKILSKIDEDGYIYWQ----YTHDRIITSVTVKNGYVYIADWEGNRIIKIN-- 357
Query: 106 KIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTHGQLLWSAG 165
S S ++ S K GT +I V ++ +Y + + G+++W+
Sbjct: 358 ----SSSGEIIWNNRYSSKYGTESI----VIDDNNIIYAGTDNGKVIKIDSTGEVIWT-- 407
Query: 166 PVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLS 225
Y + ++ D ID+ G IY S+ L L ++ WI+D
Sbjct: 408 -------YDKHKSRVD-------AIAIDK-NGYIY-SSGGNRLIKLCSNGGE-EWIRD-- 448
Query: 226 SFDKAF-TLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSA------EYAPV 278
F ++ ++ NNGY+Y+ V + ++ +G +WH +G SA +Y V
Sbjct: 449 -FGRSIASIAIDNNGYVYIGY-VYNGIAKINPDNGEQIWHVDLGLNISANSIFVDDYVYV 506
Query: 279 VDSNGWISVGSLDGL 293
S+ I SLDGL
Sbjct: 507 ASSDEMIRKISLDGL 521
>gi|8885525|dbj|BAA97455.1| unnamed protein product [Arabidopsis thaliana]
Length = 1175
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 22/159 (13%)
Query: 156 THGQLLW--SAGPVLDQLGYRQGCTKTDVDC---YFTSVPVIDQCEGSIYISNTQGELYS 210
T QL+W S L L YR C + C F S P ID+ S+Y+++T G + +
Sbjct: 877 TSSQLIWCGSHDHTLYALDYRSQCCVYKLQCGGSIFAS-PAIDEGHSSLYVASTSGRVIA 935
Query: 211 LSAHSPYFN--WIQDLSS-FDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILW-HKS 266
+S F+ W+ +L + + +TP V V+A+ + SG I+W +++
Sbjct: 936 VSIKDSPFHTLWLFELEAPIFGSLCITPSTQN-------VDGQVIAM-SPSGTIIWRYRT 987
Query: 267 VGPLGSAE-YAPVVDSNGWISVGSLDGLLYSFSP-SGVL 303
GP+ + + V+ S + V +G +YS P SG L
Sbjct: 988 GGPIFAGPCMSHVLPSQ--VLVCCRNGCVYSLEPESGCL 1024
>gi|294101161|ref|YP_003553019.1| Pyrrolo-quinoline quinone [Aminobacterium colombiense DSM 12261]
gi|293616141|gb|ADE56295.1| Pyrrolo-quinoline quinone [Aminobacterium colombiense DSM 12261]
Length = 349
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 12/123 (9%)
Query: 186 FTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDL-SSFDKAFTLTPGNNGYLYVT 244
T P D+ G +YI + G +Y+L+A + W D +S + A + N ++V
Sbjct: 38 LTGTPTYDK--GVVYIGDQGGAVYALNAETGELIWQYDAGTSINGAAAM---NEKTIFVG 92
Query: 245 IPVRALVLALDTSSGNILWHKSVG---PLGSAEYAPVVDSNGWISVGSLDGLLYSFSP-S 300
V A++ SSGN+LW +G G+ +P+ + + GS DG +Y+F P +
Sbjct: 93 -GTDGRVFAIERSSGNLLWQTLLGLDLAPGAIWGSPIYGAER-LFAGSADGRIYAFDPET 150
Query: 301 GVL 303
GV+
Sbjct: 151 GVV 153
>gi|304407678|ref|ZP_07389329.1| PA14 domain protein [Paenibacillus curdlanolyticus YK9]
gi|304343161|gb|EFM09004.1| PA14 domain protein [Paenibacillus curdlanolyticus YK9]
Length = 551
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Query: 42 PLIGEDGKIY----ACSEKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAEN 97
P IG DG IY A S L+A +G++ WS + T+P+ G G +Y+ A
Sbjct: 85 PTIGADGTIYIANMASSSSQLYALNPDGSLKWSNSTQYAAT--TSPIIGQDGTIYVGAGQ 142
Query: 98 RVLKVD 103
R++ ++
Sbjct: 143 RLVAIN 148
>gi|563945|dbj|BAA21591.1| yxaL [Bacillus subtilis]
Length = 353
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 114/275 (41%), Gaps = 54/275 (19%)
Query: 43 LIGEDGKIYACS-EKTLFAFESNGTIAWSLDLDFTCNIG----TAPVHGGTGEVYIVAEN 97
+I DG +Y S + + AF +G++ W T N+G +PV G G +Y+ + +
Sbjct: 43 VIDGDGTVYLHSRDGEMKAFNPDGSVKW-----VTGNLGKTYTQSPVLGTNGVIYLASYD 97
Query: 98 RVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTH 157
+ K+ + T E T V +G + V S ++Y + + A
Sbjct: 98 K--KIYFIDKETGEILTTVPL--------SGGPSSETVIGSDGTLYFSTLDNYVHAIKPT 147
Query: 158 GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPY 217
+ W+ K + +SVPV+ + G++Y+ Y++++ +
Sbjct: 148 SKSTWTE------------RWKLKTNGVVSSVPVLAK-NGTVYVGTYNYVFYAINSGTGQ 194
Query: 218 FNWIQDLSS-------FDKAFTLTPGN-NGYLYVTIPVRALVLALDTSSGNILWHKSVGP 269
W + S+ DK + GN +G LY TS+G++ W +
Sbjct: 195 VKWSRTTSNAFKGYPVIDKDGNIYAGNQDGQLYAY-----------TSTGSLKWTFPLNG 243
Query: 270 LGSAEYAPVVDSNGWISVGSLDGLLYSFSPSGVLN 304
S+ +P +D NG I +GS G L+S S +G +N
Sbjct: 244 FSSS--SPAIDHNGNIYIGSGSGELFSISKNGDMN 276
>gi|339499887|ref|YP_004697922.1| pyrrolo-quinoline quinone repeat-containing protein [Spirochaeta
caldaria DSM 7334]
gi|338834236|gb|AEJ19414.1| Pyrrolo-quinoline quinone repeat-containing protein [Spirochaeta
caldaria DSM 7334]
Length = 582
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 36/160 (22%)
Query: 42 PLIGEDGKIYACSEKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAE-NRVL 100
PLIG DG+++ E+++F + G W++ LD + PV G G + I + N+VL
Sbjct: 129 PLIGWDGRLFIPLEQSIFCISAAGDQRWAIQLD--APLALPPVSDGGGGILITLKTNQVL 186
Query: 101 ------KVDLLKI---------------GTSESATQVFYGTGSG--KGGTG------AIA 131
KV LK+ G+ +S+ V+Y G G + TG +++
Sbjct: 187 NISPIGKVHGLKLTDTPSVLVSAPVATSGSVQSSFLVYYQNGKGEWRSFTGLQKELPSLS 246
Query: 132 GIAVSTSSSSVYINV---KGRALFAFMTHGQLLWSA-GPV 167
GI V+ + + + V G+ + + ++LW+ GPV
Sbjct: 247 GIPVAGNRNGSKVAVLLDSGQLHTISLENNRILWTGTGPV 286
>gi|405959728|gb|EKC25732.1| Acyl-CoA synthetase family member 4 [Crassostrea gigas]
Length = 2177
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 64/148 (43%), Gaps = 20/148 (13%)
Query: 188 SVPVIDQCEGSIYISNTQGELYSLSAHSPYFNW---IQDLSSFDKAFTLTPG---NNGYL 241
S P +D G IYI + +YSL + W I + S F +P +N Y+
Sbjct: 774 SSPAVDPITGWIYIGSHDHHVYSLDIENQVCCWRVQIDEGSVFS-----SPALSYDNHYV 828
Query: 242 YVTIPVRALVLALDTSSGNILWHKSVG-PLGSAEYAPVVDSNGWISVGSLDGLLYSFSPS 300
V + V AL SG I+W G P+ S +P + + G VG +DG LY
Sbjct: 829 CVC-SLSGHVAALHPKSGEIIWKYRTGKPIFS---SPTITTIG-PCVGCVDGRLYQLDHQ 883
Query: 301 GVLNKFSKSDTSDSVIQSSPYWFHLLGP 328
G L S T+ + I SSP ++ P
Sbjct: 884 GCL---VWSFTTSAPIFSSPVQLPVVNP 908
>gi|150020291|ref|YP_001305645.1| Pyrrolo-quinoline quinone [Thermosipho melanesiensis BI429]
gi|149792812|gb|ABR30260.1| Pyrrolo-quinoline quinone [Thermosipho melanesiensis BI429]
Length = 486
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 122/339 (35%), Gaps = 94/339 (27%)
Query: 47 DGKIYACSEKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAENRVLKVDLLK 106
DG IY S ++A +GT+ W D D + +P G G +Y D
Sbjct: 198 DGTIYVVSWYKIYAINPDGTLKWEKDYDIGEPV--SPAIGDDGTIYAGGS-----YDFKA 250
Query: 107 IGTSESATQVFYGTGSGKGGTGAIA--GIAVSTSSSSVYINVKGRALFAFMTHGQLLWSA 164
I S VF S +G + AI G SS + Y +A G L W
Sbjct: 251 INPDGSIKWVFDDNVSFRGSSPAIGPDGTIYVGSSDTNY-------FYAINPDGTLKW-- 301
Query: 165 GPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDL 224
K + + S P I + +G+IY+ + LY+++
Sbjct: 302 --------------KFEANYVIKSSPAIGE-DGTIYVGSNDDNLYAINPD---------- 336
Query: 225 SSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPVVDSNGW 284
G + W G +PV+ +G
Sbjct: 337 ----------------------------------GTLKWKFETG--DDITTSPVIGEDGT 360
Query: 285 ISVGSLDGLLYSFSPSGVLN-KFSKSDTSDSVIQSSPYWFHLLGPS--IGLKAILCLMVV 341
I VGS D LY+ +P G L KF+ S S+I SSP ++G I + L V
Sbjct: 361 IYVGSWDDNLYALNPDGTLKWKFNVS----SLIYSSP----VIGSDGIIYVSTYYYLYAV 412
Query: 342 GQFSSLLSKSDLQHFV-LDESLVLAFLT-ASNQKLVASC 378
+ +LL K +F + SLV + L+ +++ L ASC
Sbjct: 413 NKDGTLLWK--FSNFKGVSRSLVESHLSLSTDGTLYASC 449
>gi|365540817|ref|ZP_09365992.1| outer membrane biogenesis protein BamB [Vibrio ordalii ATCC 33509]
Length = 386
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 71/165 (43%), Gaps = 22/165 (13%)
Query: 135 VSTSSSSVYINVKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQ 194
V+ S + GR A + GQL+W +G +G T+ D + P++
Sbjct: 193 VAVSGGVFWGTAGGRLAAAIVERGQLIWQ-----QPIGMPKGATEIDRLVDVDASPIV-- 245
Query: 195 CEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLAL 254
G +Y G+L ++ S W ++ SS T + G L+V + + V+A+
Sbjct: 246 IGGMLYAVGFNGQLIAIDLRSGKPAWKRNYSSA----TDMASDGGRLFV-VTDKDHVVAV 300
Query: 255 DTSSGNILWHKSVGPLGSAEY----APVVDSNGWISVGSLDGLLY 295
DT SG LW E+ AP + NG++ +G +G L+
Sbjct: 301 DTRSGTELWSNK-----QLEHRLLTAPAI-INGYLVLGDSEGYLH 339
>gi|386856255|ref|YP_006260432.1| hypothetical protein DGo_CA1047 [Deinococcus gobiensis I-0]
gi|379999784|gb|AFD24974.1| hypothetical protein DGo_CA1047 [Deinococcus gobiensis I-0]
Length = 574
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 115/296 (38%), Gaps = 47/296 (15%)
Query: 40 SKPLIGEDGKIYACS-EKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAENR 98
++P++ G + A S + TL+ ++ G + W L LD +I +P G V N
Sbjct: 80 AQPVVTPQGDVLAASYDDTLYRLDAGGKLVWKLKLD--GDIFASPALRPDGSVVAATANG 137
Query: 99 VLKV---DLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFM 155
+ + T + VF G GT VY + L A
Sbjct: 138 TVYAVSPQGQALWTYKVGAPVFSSPAIGADGT--------------VYFGAQNNRLQALT 183
Query: 156 THGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHS 215
G+L WS + G F+S P +D +G++Y ++ ++YSL A
Sbjct: 184 PEGRLKWS---------FAAGS------LIFSS-PALD-AQGNVYFGSSDRKIYSLDAQG 226
Query: 216 PYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEY 275
W + S F A + +G L V V A++TS G W G +A
Sbjct: 227 -KLRWTRQTSLFVNASPIV--TSGGLVVVGSYDGNVYAVNTS-GEDEWVYPAGAPVAAPA 282
Query: 276 APVVDSNGWISVGSLDGLLYSFSPSG----VLNKFSKSDTSDSVIQSSPYWFHLLG 327
A + S+G + VG L G L++ P+G L K DT +V + +F G
Sbjct: 283 AEL--SDGTVVVGDLSGTLHAIGPAGQALWTLKTGKKIDTGVAVSDAGTLYFSTEG 336
>gi|148979610|ref|ZP_01815615.1| outer membrane protein assembly complex subunit YfgL [Vibrionales
bacterium SWAT-3]
gi|145961695|gb|EDK26992.1| outer membrane protein assembly complex subunit YfgL [Vibrionales
bacterium SWAT-3]
Length = 386
Score = 39.7 bits (91), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 70/163 (42%), Gaps = 18/163 (11%)
Query: 135 VSTSSSSVYINVKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQ 194
V+ S + GR A + GQL+W PV G +G T+ D + P++
Sbjct: 193 VAVSGGVFWGTANGRLAAAIVDRGQLIWQQ-PV----GTPKGATEIDRLVDVDASPIV-- 245
Query: 195 CEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLAL 254
G++Y G+L ++ S W ++ SS A L ++G + + V A+
Sbjct: 246 LGGTLYTVGINGQLIAIDLRSGKPVWKRNYSS---AIDLA--SDGSRLFLVTDKDHVAAV 300
Query: 255 DTSSGNILWHKSVGPLGSAEY--APVVDSNGWISVGSLDGLLY 295
D SG LW PL AP + NG++ VG +G L+
Sbjct: 301 DARSGTELWST---PLLENRLLTAPAI-INGYVVVGDTEGYLH 339
>gi|448385531|ref|ZP_21564037.1| hypothetical protein C478_16802 [Haloterrigena thermotolerans DSM
11522]
gi|445657026|gb|ELZ09858.1| hypothetical protein C478_16802 [Haloterrigena thermotolerans DSM
11522]
Length = 263
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Query: 180 TDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNG 239
TDV S PV+ +Y+ N +G LY+L A + W + ++ +T+ +G
Sbjct: 96 TDVIGETYSSPVVGNA---VYVLNNEGTLYALEAETGDLEWRERVTDTPDRYTIPAVRDG 152
Query: 240 YLYVTIPVRALVLALDTSSGNILWHKSV 267
+YV+ +ALD +G W +
Sbjct: 153 TVYVSNESGGQTVALDAETGERTWEAPI 180
>gi|89072705|ref|ZP_01159270.1| hypothetical protein SKA34_19284 [Photobacterium sp. SKA34]
gi|89051525|gb|EAR56979.1| hypothetical protein SKA34_19284 [Photobacterium sp. SKA34]
Length = 387
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 68/165 (41%), Gaps = 22/165 (13%)
Query: 135 VSTSSSSVYINVKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQ 194
VS S + GR A MT G++LW + +G T+ D + PVID
Sbjct: 193 VSVSGGVFWGLANGRLAGALMTDGRMLWQQ-----SIAAPKGSTEIDRLVDVDASPVIDG 247
Query: 195 CEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLAL 254
+Y G L S+ S W ++ SS F + +G + + ++A+
Sbjct: 248 DR--LYAVGYNGSLVSIDLRSGQIAWKRNYSSATD-FVI----DGSELFLVTAKDHIVAV 300
Query: 255 DTSSGNILWHKSVGPLGSAEY----APVVDSNGWISVGSLDGLLY 295
D SG LW + +Y AP V +G++ VG +G L+
Sbjct: 301 DARSGTELWQNT-----DLQYRQLSAPAV-IDGYVVVGDAEGYLH 339
>gi|384161583|ref|YP_005543656.1| hypothetical protein BAMTA208_20085 [Bacillus amyloliquefaciens
TA208]
gi|384170697|ref|YP_005552075.1| membrane associated protein kinase [Bacillus amyloliquefaciens XH7]
gi|328555671|gb|AEB26163.1| hypothetical protein BAMTA208_20085 [Bacillus amyloliquefaciens
TA208]
gi|341829976|gb|AEK91227.1| membrane associated protein kinase with beta-propeller domain
[Bacillus amyloliquefaciens XH7]
Length = 415
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 87/217 (40%), Gaps = 47/217 (21%)
Query: 131 AGIAVSTSSSSVYINVKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKT---------- 180
AG AV +V+I K L A+ G + W V + LG T
Sbjct: 103 AGAAVD-GDGTVFIQSKDGKLTAYHPDGTVKW----VTENLGTTYTLTPVLGTNGVIYLP 157
Query: 181 --DVDCYF---------TSVPVIDQ--------CEGSIYISNTQGELYSLSAHSPYFNWI 221
D YF TSVP+ +G++Y+S +Y++ SP W
Sbjct: 158 SHDKKLYFIDKETGNILTSVPLSGAPSSDAAIGSDGTLYVSTLDNYIYAIKPTSPS-TWT 216
Query: 222 QDLS-SFDKAFTLTP--GNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPV 278
+ + P +NG LY T + A+++ +G + W K+ G Y PV
Sbjct: 217 EKWKFKTNGVVGSAPVLASNGTLY-TATYNNIFYAINSGTGQVKWSKTTSN-GFKGY-PV 273
Query: 279 VDSNGWISVGSLDGLLYSFSPSGV------LNKFSKS 309
+D +G + G+ DG LY+++ +G LN FS S
Sbjct: 274 IDKDGTVYAGNQDGNLYAYTSTGAVKWTFPLNGFSSS 310
>gi|262165911|ref|ZP_06033648.1| conserved hypothetical membrane-spanning protein [Vibrio mimicus
VM223]
gi|262025627|gb|EEY44295.1| conserved hypothetical membrane-spanning protein [Vibrio mimicus
VM223]
Length = 386
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 68/160 (42%), Gaps = 38/160 (23%)
Query: 183 DCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNW-------IQDLSSFDKAFTLTP 235
D ++SV V + + Y + G Y+L W ++ ++F + + L
Sbjct: 37 DAIWSSVKV---QQDTAYFGSDDGHFYALDLRDKSLKWKFETQGRVRSHAAFYEQWVLFT 93
Query: 236 GNNGYLYVTIPVRALVLALDTSSGNILWH--------KSVGPLGSAEY-------APVVD 280
++GYLY ALD SG + W K V P A + +PV+D
Sbjct: 94 SDDGYLY----------ALDQDSGELNWKAALNDGEVKRVLPANQAPWEFDYNKSSPVID 143
Query: 281 SNGWISVGSLDGLLYSFSPSGVLNKFSKSDTSDSVIQSSP 320
+ + VGS DG +YSF K+S + + + I+S+P
Sbjct: 144 DDM-VYVGSADGKMYSFKLKEGKAKWSYA--TQNAIRSTP 180
>gi|90410876|ref|ZP_01218890.1| hypothetical protein P3TCK_14625 [Photobacterium profundum 3TCK]
gi|90328089|gb|EAS44400.1| hypothetical protein P3TCK_14625 [Photobacterium profundum 3TCK]
Length = 385
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 118/307 (38%), Gaps = 68/307 (22%)
Query: 38 RLSKPLIGEDGKIYACSEKTLF-AFE-SNGTIAWSLDLDFTCNIGTAPVHGGT----GEV 91
RLS P IG GKI+A L A + NG + W DL TA + GG G++
Sbjct: 60 RLS-PAIGY-GKIFAADRNGLVKALDPENGKVIWQQDLQGDV---TAKLSGGITLSYGKL 114
Query: 92 YIVAEN-RVLKVD-------------------------LLKIGTSESATQVFYG-TGSGK 124
+I EN V+ +D ++ + TS Q TG K
Sbjct: 115 FIGTENADVIALDEETGEEIWRTKVEGEVLAKPLVDNGMVVVNTSRGVLQALDAETGEAK 174
Query: 125 GG-TGAIAGIAVSTSSSSVYI-------NVKGRALFAFMTHGQLLWSAGPVLDQLGYRQG 176
+ + + + SS V I GR A M GQ+LW +G +G
Sbjct: 175 WQLSSEVPTLTLRGDSSPVAISGGIFWGQANGRLAGALMNTGQMLWQ-----QPIGSPKG 229
Query: 177 CTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPG 236
T+ D + PVI +Y G L S+ S W + SS F + G
Sbjct: 230 ATEIDRLVDVDASPVI--AGERLYALGYNGALVSIELRSGQVAWKRAYSSATD-FAID-G 285
Query: 237 NNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEY----APVVDSNGWISVGSLDG 292
+ YL + + ++A+DT SG LW EY AP V S G++ +G +G
Sbjct: 286 SQLYL---VTDKDHIVAVDTRSGTELWQNK-----DLEYRLLSAPAVIS-GYLVLGDSEG 336
Query: 293 LLYSFSP 299
L+ P
Sbjct: 337 YLHWLDP 343
>gi|91762926|ref|ZP_01264891.1| PQQ enzyme repeat family protein [Candidatus Pelagibacter ubique
HTCC1002]
gi|91718728|gb|EAS85378.1| PQQ enzyme repeat family protein [Candidatus Pelagibacter ubique
HTCC1002]
Length = 432
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 15/137 (10%)
Query: 127 TGAIAGIAVSTSSSSVYINVK-GRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCY 185
T + I++ ++Y N G + GQL+W QL + +
Sbjct: 229 TKSNTQISIVLDDKNIYFNNSIGDITAVDIKSGQLVW-------QLPTQNNNISQNAFQL 281
Query: 186 FTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTI 245
S VI+ E +I+ SN + E YS+ + + NW ++SS L P G L +TI
Sbjct: 282 SNSELVIN--ENTIFFSNNKNEFYSIDSATGLINWKTEISS-----DLKPVVIGKLIITI 334
Query: 246 PVRALVLALDTSSGNIL 262
+ + +D SGNI+
Sbjct: 335 SEKGYLYIIDKKSGNII 351
>gi|449144289|ref|ZP_21775104.1| putative membrane-spanning protein [Vibrio mimicus CAIM 602]
gi|449079790|gb|EMB50709.1| putative membrane-spanning protein [Vibrio mimicus CAIM 602]
Length = 386
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 68/160 (42%), Gaps = 38/160 (23%)
Query: 183 DCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNW-------IQDLSSFDKAFTLTP 235
D ++SV V + + Y + G Y+L W ++ ++F + + L
Sbjct: 37 DAIWSSVKV---QQDTAYFGSDDGHFYALDLRDKSLKWKFETQGRVRSHAAFYEQWVLFT 93
Query: 236 GNNGYLYVTIPVRALVLALDTSSGNILWH--------KSVGPLGSAEY-------APVVD 280
++GYLY ALD SG + W K V P A + +PV+D
Sbjct: 94 SDDGYLY----------ALDQDSGELNWKAALNDGDVKRVLPANQAPWEFDYNKSSPVID 143
Query: 281 SNGWISVGSLDGLLYSFSPSGVLNKFSKSDTSDSVIQSSP 320
+ + VGS DG +YSF K+S + + + I+S+P
Sbjct: 144 DDM-VYVGSADGKMYSFKLKEGKAKWSYA--TQNAIRSTP 180
>gi|254455615|ref|ZP_05069044.1| PQQ enzyme repeat family protein [Candidatus Pelagibacter sp.
HTCC7211]
gi|207082617|gb|EDZ60043.1| PQQ enzyme repeat family protein [Candidatus Pelagibacter sp.
HTCC7211]
Length = 432
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 197 GSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDT 256
SIY SN + E YS+ + NW ++SS +TP G L T+ +L ++
Sbjct: 291 NSIYFSNNKNEFYSIDLKNGIINWKNEISS-----NITPVITGNLIFTVSEDGYLLTIEK 345
Query: 257 SSGNIL 262
+ GNI+
Sbjct: 346 NKGNII 351
>gi|71084010|ref|YP_266730.1| PQQ repeat-containing protein [Candidatus Pelagibacter ubique
HTCC1062]
gi|71063123|gb|AAZ22126.1| PQQ enzyme repeat family protein [Candidatus Pelagibacter ubique
HTCC1062]
Length = 433
Score = 39.7 bits (91), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 15/137 (10%)
Query: 127 TGAIAGIAVSTSSSSVYINVK-GRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCY 185
T + I++ ++Y N G + GQL+W QL + +
Sbjct: 230 TKSNTQISIVLDDKNIYFNNSIGDITAVDIKSGQLVW-------QLPTQNNNISQNAFQL 282
Query: 186 FTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTI 245
S VI+ E +I+ SN + E YS+ + + NW ++SS L P G L +TI
Sbjct: 283 SNSELVIN--ENTIFFSNNKNEFYSIDSATGLINWKTEISS-----DLKPVVIGKLIITI 335
Query: 246 PVRALVLALDTSSGNIL 262
+ + +D SGNI+
Sbjct: 336 SEKGYLYIIDKKSGNII 352
>gi|262198134|ref|YP_003269343.1| pyrrolo-quinoline quinone [Haliangium ochraceum DSM 14365]
gi|262081481|gb|ACY17450.1| Pyrrolo-quinoline quinone [Haliangium ochraceum DSM 14365]
Length = 440
Score = 39.7 bits (91), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 108/290 (37%), Gaps = 73/290 (25%)
Query: 42 PLIGEDGKIYACSEKT-LFAFE-SNGTIAWSLDLD------------FTCNIGTAPVHGG 87
P + DG +Y S+ ++A E + GT W + C++ + P G
Sbjct: 161 PAVAADGTVYVGSDDDHVYAVEGATGTERWRFRVGACEPPVGAGPVAVRCDVDSGPTIGP 220
Query: 88 TGEVYIVAEN-RVLKVD---LLKIGTSE--SATQVFYGTGSGKGGTGAIAGIAVSTSSSS 141
G VY+ + L D K+ T+E S T GS + GT
Sbjct: 221 DGTVYVGGDGIHALWPDGSLRWKLATAERVSTTPALAPPGSSEAGT-------------- 266
Query: 142 VYINVKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYI 201
VY A++A G W+ YR T DV+ S P + +G+IY+
Sbjct: 267 VYAASLDDAIYAVRPDGTRAWA---------YR---TPRDVE----SSPAV-GADGTIYV 309
Query: 202 SNTQGELYSLSAHSPYFNW-------IQDLSSFDKAFTLTPGN-NGYLYVTIPVRALVLA 253
+L++L+ W I+ + T+ G+ +G+LY P
Sbjct: 310 GGDDDKLHALAPDG-TLRWAVVTGGDIRSSPAVADDGTIYAGSYDGHLYAIEP------- 361
Query: 254 LDTSSGNILWHKSVGPLGSAEYAPVVDSNGWISVGSLDGLLYSFSPSGVL 303
G + W V G +P V +NG I G+ D +Y+ SP G L
Sbjct: 362 ----GGRVKWRFPV--AGKIHGSPAVTANGIILFGAQDDHIYAVSPEGAL 405
>gi|293372017|ref|ZP_06618416.1| PQQ enzyme repeat protein [Bacteroides ovatus SD CMC 3f]
gi|292633028|gb|EFF51610.1| PQQ enzyme repeat protein [Bacteroides ovatus SD CMC 3f]
Length = 654
Score = 39.7 bits (91), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 106/265 (40%), Gaps = 63/265 (23%)
Query: 43 LIGEDGKIYACSEK----TLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAENR 98
L+ DG IY C ++A NGT W++ LD IG P G +Y +
Sbjct: 358 LVAPDGTIYQCVRNATINNVYAINPNGTQKWAVKLD--AAIGAFPALSADGVLYCLTN-- 413
Query: 99 VLKVDLLKIGTSESATQVFYGTGSGKGGTGAI---AGIAVSTSSSSVY------------ 143
K L + S A + + + G G+ + AG + +S+++Y
Sbjct: 414 --KSTLYALDASSGAIK-WQQSLDGATGSAVVIDKAGNVYAGTSAAIYSFKSNKEQNWKL 470
Query: 144 --INVKGRALFAFMTHGQLLWSA--GPVLDQLGYRQGCTK-----TDVDCYFTSVPVIDQ 194
+NV +A FA Q+L++ L + G K T D YF P+ D+
Sbjct: 471 EEVNVTEQATFAL--KDQVLYATLKNGGLVAVDMTNGTKKWTYPTTKGDAYF---PIADK 525
Query: 195 CEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNN-----------GYLYV 243
G++Y + E S + H+ +S K + GNN G LY+
Sbjct: 526 -NGNVYFT----EKGSQTVHAVN-------ASGSKIWEKNVGNNLNYSGGALSTDGILYI 573
Query: 244 TIPVRALVLALDTSSGNILWHKSVG 268
VL LD ++GNI++ ++VG
Sbjct: 574 GTQSNNKVLGLDITNGNIVFEETVG 598
>gi|290979131|ref|XP_002672288.1| predicted protein [Naegleria gruberi]
gi|284085863|gb|EFC39544.1| predicted protein [Naegleria gruberi]
Length = 496
Score = 39.7 bits (91), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 32/161 (19%)
Query: 383 PKLPSIYTGNERAILLFLFFESVVLLVLAVLVRFCCIFWRKKKLQGQHLGNFLEKRRSLQ 442
P P +YT +ER + L +ES +L L L + RKK+++ +KRR LQ
Sbjct: 299 PPKPRVYTSSERVVTKPL-YESNPILTLTQLQNSLEVEKRKKRIE--------DKRRELQ 349
Query: 443 LKKKAFDRSITELEKK----VAEDAVAN----EVIKKSVVCLGRDEAAASSESKSFPPVY 494
K ++I + +++ + ED++ + E+ + S L R +S P
Sbjct: 350 ESKNMRAKAIRDEKQRRETFLKEDSILSRPIPEIKRPSTPSLTR---------RSTTPTN 400
Query: 495 DAKSRSYSFQGAKKESVTIF------HTLSATSSAESSSER 529
+K S SF K S++I T+S+TS SS R
Sbjct: 401 SSKRPSSSFAERPKSSISIETVKPQQKTISSTSQTMKSSSR 441
>gi|400287785|ref|ZP_10789817.1| Pyrrolo-quinoline quinone [Psychrobacter sp. PAMC 21119]
Length = 402
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 61/142 (42%), Gaps = 26/142 (18%)
Query: 172 GYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQ-------GELYSLSAHSPYFNWIQDL 224
G Q + V + V + +G +SN Q G+L + S +I DL
Sbjct: 234 GLPQWSRRVGVGAGSSEVERMSDVDGKPVVSNNQLFAISYSGQLLGIDLASRQVMFINDL 293
Query: 225 SSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYA------PV 278
+S KA T+ N + + V+A D +SG +LW S E A PV
Sbjct: 294 ASL-KALTV----NNQQVIATSLDGKVVAYDRNSGEMLWE-------SEELAYRHLTNPV 341
Query: 279 VDSNGWISVGSLDGLLYSFSPS 300
+ N +I+VG DG+++ F P+
Sbjct: 342 MIGN-YIAVGDYDGVVHLFDPA 362
>gi|423651841|ref|ZP_17627408.1| hypothetical protein IKA_05625 [Bacillus cereus VD169]
gi|401274696|gb|EJR80667.1| hypothetical protein IKA_05625 [Bacillus cereus VD169]
Length = 461
Score = 39.7 bits (91), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 121/295 (41%), Gaps = 57/295 (19%)
Query: 34 RSAFRLSKPLIGEDGKIYACSEKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYI 93
+ A + P+I DG +Y + KT+ A+ S+G+ W D F IG T +
Sbjct: 156 KDANTYNTPIIDSDGTVYVYNSKTITAYNSDGSKKWVSDEMF---IGATDSKNST----L 208
Query: 94 VAENRVLKVDLLKIGTS-------ESATQVFYGTGSGKGGT-GAIAGIAVSTSSSSVYIN 145
V++N + LL G + ++ +++ SG GG G G+ +S +YIN
Sbjct: 209 VSKNGTIYT-LLSSGQNYFLYAHDKNGKELWNKKFSGNGGNPGFSLGL-----NSELYIN 262
Query: 146 VKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQ 205
G ++ F +G P+ +RQ D + P I +G+IYI+
Sbjct: 263 -GGSVVYVFDKNGN------PIKQ---WRQD------DINSKAAPTISSKDGTIYIAGNS 306
Query: 206 GELYSLSAHSPYFNWIQDLSSFDKAFTLTP--GNNGYLYVTIPVRALVLALDTSSGNILW 263
G LSA++ + S+ + +P NG +YV + D G + W
Sbjct: 307 G----LSAYNQDYTLKWKYSTGTQVIVNSPVIDKNGVVYVRSEREVFAVNPD---GTLKW 359
Query: 264 HK--SVGPLGSAEYAPVVDSNGWISVGSLDGLLYSFSPSGVLNKFSKSDTSDSVI 316
S+ +GS+ + +D DG LY+ +N ++ +T SV+
Sbjct: 360 KMPFSLFHVGSSNNSISIDK---------DGTLYAAGYVAKINYYAPDETYYSVV 405
>gi|357118818|ref|XP_003561146.1| PREDICTED: tyrocidine synthase 3-like [Brachypodium distachyon]
Length = 1142
Score = 39.3 bits (90), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 77/177 (43%), Gaps = 18/177 (10%)
Query: 159 QLLW--SAGPVLDQLGYRQGCTKTDVDC--YFTSVPVIDQCEGSIYISNTQGELYSLSAH 214
L+W S L L Y+ V C F P +D + IY++ T G + ++S
Sbjct: 893 NLIWCGSYDHNLYALNYKDRYCAYKVSCGGSFYGSPAVDMSDNMIYVACTSGLVTAISLQ 952
Query: 215 SPYFNWIQDLSSFDKAF-TLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSV-GPL-G 271
P F + + F +L + V V +V+AL+ S G ++W +V GP+
Sbjct: 953 VPSFRIVWQYEAGAPIFSSLAIDHQSGNVVCCLVNGMVIALN-SHGTVVWKATVGGPIFA 1011
Query: 272 SAEYAPVVDSNGWISVGSLDGLLYSFS-PSGVL-------NKFSKSDTSDSVIQSSP 320
A + + S + + S DG LYSF SGVL + + S D V+ S+P
Sbjct: 1012 GASVSSALSSQ--VLIPSRDGSLYSFDITSGVLLWSYEVGDPITASAFVDEVLASTP 1066
>gi|386810753|ref|ZP_10097979.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386405477|dbj|GAB60860.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 401
Score = 39.3 bits (90), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 118/297 (39%), Gaps = 68/297 (22%)
Query: 40 SKPLIGEDGKIYACS-EKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAENR 98
+ P IG+DG IY S +K ++A +G + W+ FT + I+ +
Sbjct: 122 ASPAIGDDGTIYIGSRDKKMYAITPDGKLKWT----FTTS-------------GIILSSA 164
Query: 99 VLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVST---SSSSVYINVKGRALFAFM 155
+ D++ G+ ++ V G K A + I S + ++Y+ AL A
Sbjct: 165 TVTSDIVCFGSDDNNLYVLTLDGKLKWKYTAKSNITASPAIWTDGTIYLFETSGALHALS 224
Query: 156 THGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHS 215
+ G W + ++G T V ++S + D +G++Y G L +L +
Sbjct: 225 SDGVEKW-----MKRIG-------TGVYSSYSSPSIGD--DGTVYAGTDSGRLVALKPNG 270
Query: 216 PYFNWIQDLSSFDKAFTLTPG-----------NNGYLYVTIPVRALVLALDTSSGNILWH 264
I+ + KA TP NG++Y P L + T++ W
Sbjct: 271 T----IKWYVNTGKAIHGTPAIANDGTIIFGSYNGFVYAVYPDCKLRWSFKTNN----WV 322
Query: 265 KSVGPLGSAEYAPVVDSNGWISVGSLDGLLYSFSPSGVLN-KFSKSDTSDSVIQSSP 320
S +P +D+ G + +GS DG LY+ + G L F D I+SSP
Sbjct: 323 AS---------SPAIDAEGTVYIGSSDGKLYAINADGTLKWSFQTKD----AIESSP 366
>gi|422013655|ref|ZP_16360274.1| outer membrane biogenesis protein BamB [Providencia
burhodogranariea DSM 19968]
gi|414102693|gb|EKT64284.1| outer membrane biogenesis protein BamB [Providencia
burhodogranariea DSM 19968]
Length = 390
Score = 39.3 bits (90), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 65/153 (42%), Gaps = 22/153 (14%)
Query: 147 KGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDV----DCYFTSVPVIDQCEGSIYIS 202
GR ++ GQL+W Q Q + T++ D T PVID +G IY
Sbjct: 211 NGRVSAVLLSQGQLIW-------QQRISQVTSSTEIGRLDDVDMT--PVID--DGIIYAI 259
Query: 203 NTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNIL 262
G L +L S W +DL S + + G N YL + VL++ + G L
Sbjct: 260 AYNGTLAALDMRSGQIKWKRDLGSVNN--MVLSGENLYL---VDQHDRVLSVRKTDGVTL 314
Query: 263 WHKSVGPLGSAEYAPVVDSNGWISVGSLDGLLY 295
W + L AP + NG+I VG +G L+
Sbjct: 315 WTQE-DLLNRGLTAPEM-YNGYIVVGDKEGYLH 345
>gi|269962407|ref|ZP_06176757.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269832903|gb|EEZ87012.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 201
Score = 39.3 bits (90), Expect = 6.2, Method: Composition-based stats.
Identities = 43/152 (28%), Positives = 66/152 (43%), Gaps = 22/152 (14%)
Query: 148 GRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGE 207
GR A + GQL+W PV G +G T+ D S P++ G+++ G+
Sbjct: 21 GRLAAAIVERGQLIWQQ-PV----GTPKGATEIDRLVDVDSSPIV--LGGTLFTVGYNGQ 73
Query: 208 LYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSV 267
L ++ S W ++ SS + T +G I + V+A+D SG LW S
Sbjct: 74 LIAIDLRSANPIWKRNYSSANDIAT-----DGSRIFVITEKDHVVAVDARSGTELWENS- 127
Query: 268 GPLGSAEY----APVVDSNGWISVGSLDGLLY 295
EY APV+ N ++ VG G L+
Sbjct: 128 ----KLEYRQLTAPVIVDN-YLVVGDTLGYLH 154
>gi|343494443|ref|ZP_08732705.1| outer membrane biogenesis protein BamB [Vibrio nigripulchritudo
ATCC 27043]
gi|342825348|gb|EGU59847.1| outer membrane biogenesis protein BamB [Vibrio nigripulchritudo
ATCC 27043]
Length = 385
Score = 39.3 bits (90), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 71/165 (43%), Gaps = 22/165 (13%)
Query: 135 VSTSSSSVYINVKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQ 194
V+ S + GR A + GQL+W PV G +G T+ D + PVI
Sbjct: 193 VTISGGVFWGTANGRIAAAIVARGQLIWQQ-PV----GTPKGSTEIDRLVDADASPVI-- 245
Query: 195 CEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLAL 254
++YI G+L ++ S W + SS +T G N YL + + ++A+
Sbjct: 246 IGSTLYIVGVNGQLVAIDLRSGAPTWKRTYSSATD--MVTDGTNLYL---VTDKDHLVAV 300
Query: 255 DTSSGNILWHKSVGPLGSAEY----APVVDSNGWISVGSLDGLLY 295
D SG +W + E+ AP + NG + VG +G L+
Sbjct: 301 DARSGTEIWSNN-----QLEHRLLTAPSI-VNGRLVVGDTEGYLH 339
>gi|54307961|ref|YP_128981.1| outer membrane protein assembly complex subunit YfgL
[Photobacterium profundum SS9]
gi|46912387|emb|CAG19179.1| Conserved hypothetical protein [Photobacterium profundum SS9]
Length = 385
Score = 39.3 bits (90), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 118/307 (38%), Gaps = 68/307 (22%)
Query: 38 RLSKPLIGEDGKIYACSEKTLF-AFE-SNGTIAWSLDLDFTCNIGTAPVHGGT----GEV 91
RLS P IG GKI+A L A + NG + W DL TA + GG G++
Sbjct: 60 RLS-PAIGY-GKIFAADRNGLVKALDPENGKVIWQQDLQGDV---TAKLAGGITLSYGKL 114
Query: 92 YIVAEN-RVLKVD-------------------------LLKIGTSESATQVFYG-TGSGK 124
+I EN V+ +D ++ + TS Q TG K
Sbjct: 115 FIGTENADVIALDEETGEEIWRTKVEGEVLAKPLVDNGMVVVNTSRGVLQALDAETGEAK 174
Query: 125 GG-TGAIAGIAVSTSSSSVYI-------NVKGRALFAFMTHGQLLWSAGPVLDQLGYRQG 176
+ + + + SS V I GR A M GQ+LW +G +G
Sbjct: 175 WQLSSEVPTLTLRGDSSPVAISGGIFWGQANGRLAGALMNTGQMLWQ-----QPIGSPKG 229
Query: 177 CTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPG 236
T+ D + PVI +Y G L S+ S W + SS F + G
Sbjct: 230 ATEIDRLVDVDATPVI--AGERLYALGYNGALVSIELRSGQVAWKRAYSSATD-FAID-G 285
Query: 237 NNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEY----APVVDSNGWISVGSLDG 292
+ YL + + ++A+DT SG LW EY AP + S G++ +G +G
Sbjct: 286 SQLYL---VTDKDHIVAVDTRSGTELWQNK-----DLEYRLLSAPALIS-GYLVLGDSEG 336
Query: 293 LLYSFSP 299
L+ P
Sbjct: 337 YLHWLDP 343
>gi|163746868|ref|ZP_02154225.1| PQQ enzyme repeat family protein [Oceanibulbus indolifex HEL-45]
gi|161379982|gb|EDQ04394.1| PQQ enzyme repeat family protein [Oceanibulbus indolifex HEL-45]
Length = 460
Score = 39.3 bits (90), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 57/128 (44%), Gaps = 24/128 (18%)
Query: 186 FTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTI 245
TS PVI G++Y+ N G L +L +S W+ + + P + VT
Sbjct: 306 VTSAPVI--SGGTVYVGNHSGRLAALDVNSGDRKWVARDGAIGPVW---PAGDSVFAVT- 359
Query: 246 PVRALVLALDTSSGNILWHKSVGPLGS-------------AEYAPVVDSNGWISVGSLDG 292
+ LV LD S+G +W PL + A Y P++ + G + V S DG
Sbjct: 360 DLNELVR-LDASTGRRIWGT---PLPNFVKDKPKKQSEVVAHYGPII-AGGRVIVASNDG 414
Query: 293 LLYSFSPS 300
+L SF+P+
Sbjct: 415 VLRSFNPT 422
>gi|354583774|ref|ZP_09002672.1| Pyrrolo-quinoline quinone repeat-containing protein [Paenibacillus
lactis 154]
gi|353197654|gb|EHB63135.1| Pyrrolo-quinoline quinone repeat-containing protein [Paenibacillus
lactis 154]
Length = 315
Score = 39.3 bits (90), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 42 PLIGEDGKIYACSEKT-LFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAEN 97
P IG DG IY + + L+A +GT+ W L + + +P G G +Y+ E+
Sbjct: 131 PSIGADGTIYVGGDDSYLYAIHPDGTLKWDLKIGSLVFVSPSPAIGADGTIYVATED 187
>gi|424042346|ref|ZP_17780086.1| outer membrane assembly lipoprotein YfgL [Vibrio cholerae HENC-02]
gi|408889696|gb|EKM28041.1| outer membrane assembly lipoprotein YfgL [Vibrio cholerae HENC-02]
Length = 386
Score = 39.3 bits (90), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 65/153 (42%), Gaps = 22/153 (14%)
Query: 147 KGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQG 206
GR A + GQL+W PV G +G T+ D S P++ G+++ G
Sbjct: 205 NGRLAAAIVERGQLIWQQ-PV----GTPKGATEIDRLVDVDSSPIV--LGGTLFTVGYNG 257
Query: 207 ELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKS 266
+L ++ S W ++ SS T +G I + V+A+D SG LW S
Sbjct: 258 QLIAIDLRSANPIWKRNYSSATDIAT-----DGSRIFVITEKDHVVAVDARSGTELWENS 312
Query: 267 VGPLGSAEY----APVVDSNGWISVGSLDGLLY 295
EY APV+ N ++ VG G L+
Sbjct: 313 -----KLEYRQLTAPVIVDN-YLVVGDTLGYLH 339
>gi|424032155|ref|ZP_17771575.1| outer membrane assembly lipoprotein YfgL [Vibrio cholerae HENC-01]
gi|408876160|gb|EKM15289.1| outer membrane assembly lipoprotein YfgL [Vibrio cholerae HENC-01]
Length = 386
Score = 39.3 bits (90), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 65/153 (42%), Gaps = 22/153 (14%)
Query: 147 KGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQG 206
GR A + GQL+W PV G +G T+ D S P++ G+++ G
Sbjct: 205 NGRLAAAIVERGQLIWQQ-PV----GTPKGATEIDRLVDVDSSPIV--LGGTLFTVGYNG 257
Query: 207 ELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKS 266
+L ++ S W ++ SS T +G I + V+A+D SG LW S
Sbjct: 258 QLIAIDLRSANPIWKRNYSSATDIAT-----DGSRIFVITEKDHVVAVDARSGTELWENS 312
Query: 267 VGPLGSAEY----APVVDSNGWISVGSLDGLLY 295
EY APV+ N ++ VG G L+
Sbjct: 313 -----KLEYRQLTAPVIVDN-YLVVGDTLGYLH 339
>gi|225463846|ref|XP_002265371.1| PREDICTED: acyl-CoA synthetase family member 4 [Vitis vinifera]
gi|296088768|emb|CBI38218.3| unnamed protein product [Vitis vinifera]
Length = 1175
Score = 38.9 bits (89), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 81/179 (45%), Gaps = 33/179 (18%)
Query: 147 KGRALFAFMTHGQLLWSAGPVLDQ----------------LGYRQGCTKTDVDC---YFT 187
G + F T G++ + PV+D+ L YR C + C F
Sbjct: 899 NGNICWTFQTRGEV--KSQPVIDKRRNLVWCGSHDHYLYALNYRNHCCVYKLPCGGSIFG 956
Query: 188 SVPVIDQCEGSIYISNTQGELYSLSAHSPYFN--WIQDLSSFDKAF-TLTPGNNGYLYVT 244
S P ID+ +Y+++T G + ++S F W+ +L+ F +L+ +NG +
Sbjct: 957 S-PAIDEARDILYVASTSGRVTAISLKVQPFCTLWLHELNV--PVFGSLSVSSNGNVICC 1013
Query: 245 IPVRALVLALDTSSGNILWH-KSVGPL-GSAEYAPVVDSNGWISVGSLDGLLYSFSPSG 301
+ V VLA D SSG+I+W K+ GP+ A + + S I S +G +YSF G
Sbjct: 1014 L-VDGHVLAFD-SSGSIVWKGKTGGPIFAGACISHALPSQALIC--SRNGSVYSFELEG 1068
>gi|148380281|ref|YP_001254822.1| tail fiber protein [Clostridium botulinum A str. ATCC 3502]
gi|148289765|emb|CAL83873.1| putative tail fiber protein [Clostridium botulinum A str. ATCC
3502]
Length = 561
Score = 38.9 bits (89), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 107/255 (41%), Gaps = 46/255 (18%)
Query: 48 GKIYACSEKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIV--AENRVLKVDLL 105
GKIY S K L + +G I W +T + V G VYI NR++K++
Sbjct: 304 GKIYCKSTKILSKIDEDGYIYWQ----YTHDRIITSVTVKNGYVYIADWEGNRIIKIN-- 357
Query: 106 KIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTHGQLLWSAG 165
S S ++ S K GT +I V ++ +Y + + G+++W+
Sbjct: 358 ----SSSGEIIWNNRYSSKYGTESI----VIDDNNIIYAGTDNGKVIKIDSTGEVIWT-- 407
Query: 166 PVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLS 225
Y + ++ D ID+ G IY S L L ++ WI+D
Sbjct: 408 -------YDKHKSRVDAIS-------IDK-NGYIY-SGGGNRLVKLCSNGGE-EWIRD-- 448
Query: 226 SFDKAF-TLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSA------EYAPV 278
F ++ ++ +NGY+Y+ + ++ ++ +G +WH +G SA +Y V
Sbjct: 449 -FGRSIASIAIDSNGYIYIGF-INYGIVKINPDNGEQIWHVDLGLNISANSIFVDDYVYV 506
Query: 279 VDSNGWISVGSLDGL 293
S+ I SLDGL
Sbjct: 507 ASSDKIIRKISLDGL 521
>gi|345303552|ref|YP_004825454.1| Pyrrolo-quinoline quinone repeat-containing protein [Rhodothermus
marinus SG0.5JP17-172]
gi|345112785|gb|AEN73617.1| Pyrrolo-quinoline quinone repeat-containing protein [Rhodothermus
marinus SG0.5JP17-172]
Length = 372
Score = 38.9 bits (89), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 51/110 (46%), Gaps = 7/110 (6%)
Query: 190 PVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFD-KAFTLTPGNNGYLYVTIPVR 248
PV+D + +Y++ G +Y+L+ W+Q+ + + P G L V R
Sbjct: 136 PVLD--DEVVYVAERWGRVYALNVEDGRERWVQEPEATGLEGVRARPVRVGELLVVADKR 193
Query: 249 ALVLALDTSSGNILWHKSVGPLGSAEYAPVVDSNGWISVGSLDGLLYSFS 298
V+AL+ +G + W + + P+ YA + ++G + V + G L +
Sbjct: 194 GRVVALEARTGRLRWRRQLRPV----YADLAVADGLVLVPTTRGRLVALE 239
>gi|237722325|ref|ZP_04552806.1| cell surface protein [Bacteroides sp. 2_2_4]
gi|229448135|gb|EEO53926.1| cell surface protein [Bacteroides sp. 2_2_4]
Length = 499
Score = 38.9 bits (89), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 104/264 (39%), Gaps = 61/264 (23%)
Query: 43 LIGEDGKIYAC----SEKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAENR 98
L+ DG IY C + ++A NGT W++ LD IG P G +Y +
Sbjct: 203 LVAPDGTIYQCVRNATINNVYAINPNGTQKWAVKLD--AAIGAFPALSADGVLYCLTN-- 258
Query: 99 VLKVDLLKIGTSESATQVFYGTGSGKGGTGAI--AGIAVSTSSSSVY------------- 143
K L + S A + G AI AG + +S+++Y
Sbjct: 259 --KSTLYALDASSGAIKWQQSLDGATGSAVAIDKAGNVYAGTSAAIYSFKSNKEQNWKLE 316
Query: 144 -INVKGRALFAFMTHGQLLWSA--GPVLDQLGYRQGCTK-----TDVDCYFTSVPVIDQC 195
+NV +A FA Q+L++ L + G K T D YF P+ D+
Sbjct: 317 EVNVTEQATFAL--KDQVLYATLKNGGLVAVDMTNGTKKWTYPTTKGDAYF---PIADK- 370
Query: 196 EGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNN-----------GYLYVT 244
G++Y + E S + H+ +S K + GNN G LY+
Sbjct: 371 NGNVYFT----EKGSQTVHAVN-------ASGSKIWEKNVGNNLNYSGGALSTDGILYIG 419
Query: 245 IPVRALVLALDTSSGNILWHKSVG 268
VL LD ++GNI++ ++VG
Sbjct: 420 TQSNNKVLGLDITNGNIVFEETVG 443
>gi|308175690|ref|YP_003922395.1| hypothetical protein BAMF_3799 [Bacillus amyloliquefaciens DSM 7]
gi|307608554|emb|CBI44925.1| Uncharacterized WD repeat-containing protein YxaL [Bacillus
amyloliquefaciens DSM 7]
Length = 415
Score = 38.9 bits (89), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 87/217 (40%), Gaps = 47/217 (21%)
Query: 131 AGIAVSTSSSSVYINVKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKT---------- 180
AG AV +V+I K L A+ G + W V + LG T
Sbjct: 103 AGAAVD-GDGTVFIQSKDGKLTAYHPDGTVKW----VTENLGTTYTLTPVLGTNGVIYLP 157
Query: 181 --DVDCYF---------TSVPVIDQ--------CEGSIYISNTQGELYSLSAHSPYFNWI 221
D YF TSVP+ +G++Y+S +Y++ SP W
Sbjct: 158 SHDKKLYFIDKETGNILTSVPLSGAPSSDAAIGSDGTLYVSTLDNYIYAIKPTSPS-TWT 216
Query: 222 QDLS-SFDKAFTLTP--GNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPV 278
+ + P +NG LY+ + A+++ +G + W K+ G Y PV
Sbjct: 217 EKWKFKTNGVVGSAPVLASNGTLYMAT-YNNIFYAINSGTGQVKWSKTTSN-GFKGY-PV 273
Query: 279 VDSNGWISVGSLDGLLYSFSPSGV------LNKFSKS 309
+D +G + G+ DG LY+++ +G LN FS S
Sbjct: 274 IDKDGTVYAGNQDGNLYAYTSTGAVKWTFPLNGFSSS 310
>gi|336124874|ref|YP_004566922.1| PQQ enzyme repeat family protein [Vibrio anguillarum 775]
gi|335342597|gb|AEH33880.1| PQQ enzyme repeat family protein [Vibrio anguillarum 775]
Length = 387
Score = 38.9 bits (89), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 67/152 (44%), Gaps = 22/152 (14%)
Query: 148 GRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGE 207
GR A + GQL+W +G +G T+ D + P++ G +Y G+
Sbjct: 207 GRLAAAIVERGQLIWQ-----QPIGMPKGATEIDRLVDVDASPIV--IGGMLYAVGFNGQ 259
Query: 208 LYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSV 267
L ++ S W ++ SS T + G L+V + + V+A+DT SG LW
Sbjct: 260 LIAIDLRSGKPAWKRNYSSA----TDMASDGGRLFV-VTDKDHVVAVDTRSGTELWSNK- 313
Query: 268 GPLGSAEY----APVVDSNGWISVGSLDGLLY 295
E+ AP + NG++ +G +G L+
Sbjct: 314 ----QLEHRLLTAPAI-INGYLVLGDSEGYLH 340
>gi|374620260|ref|ZP_09692794.1| outer membrane assembly lipoprotein YfgL [gamma proteobacterium
HIMB55]
gi|374303487|gb|EHQ57671.1| outer membrane assembly lipoprotein YfgL [gamma proteobacterium
HIMB55]
Length = 393
Score = 38.9 bits (89), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 58/116 (50%), Gaps = 10/116 (8%)
Query: 183 DCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPG-NNGYL 241
D +F PV++ +G IY+++++GE+ ++ A+ W D+S ++ + G + G L
Sbjct: 65 DGFFKITPVLE--DGVIYVASSEGEVAAIDANDGDKRW--DVS-LERPISGGVGYHEGSL 119
Query: 242 YVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPVVDSNGWISVGSLDGLLYSF 297
Y+ ++ L G+++W P+ AP S+ W+ V + DG L F
Sbjct: 120 YLG-GADGSIMQLSADDGSVVWEA---PVSGEVLAPPAVSDDWVIVQTYDGKLLGF 171
>gi|91775968|ref|YP_545724.1| Pyrrolo-quinoline quinone [Methylobacillus flagellatus KT]
gi|91709955|gb|ABE49883.1| Pyrrolo-quinoline quinone [Methylobacillus flagellatus KT]
Length = 390
Score = 38.9 bits (89), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 58/132 (43%), Gaps = 13/132 (9%)
Query: 135 VSTSSSSVYINVKGRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVID 193
V+ + + VY G L + G+ LW A L + G T+ + TS+PV+D
Sbjct: 194 VTIADNIVYAGFAGGKLVSLRADDGKTLWEASVALPK-----GTTELERIADITSLPVVD 248
Query: 194 QCEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLA 253
+Y QG + ++ + W +D+SS+ T + +YV+ A V A
Sbjct: 249 GP--LVYAVAYQGRVAAVERTTGRVAWTRDISSY----TGLGAEDARVYVSHASGA-VFA 301
Query: 254 LDTSSGNILWHK 265
LD SSG W +
Sbjct: 302 LDYSSGRTFWRQ 313
>gi|395776743|ref|ZP_10457258.1| Ser/Thr protein kinase [Streptomyces acidiscabies 84-104]
Length = 665
Score = 38.9 bits (89), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 60/112 (53%), Gaps = 10/112 (8%)
Query: 195 CEGSIYISNTQGELYSLSAHSPYFNWIQDL-----SSFDKAFTLTPGNNGYLYVTIPVRA 249
+G++Y+++ + EL+++ A + W Q L S+++ F+ +G +YV+ P
Sbjct: 442 ADGTVYLASGREELWAVDAATGRRRWKQQLRPRGPRSYNR-FSSPAVADGRVYVSFPYDR 500
Query: 250 LVLALDTSSGNILWHKSVGPLGSAEYAPVVDSNGWISVGSLDGLLYSFSPSG 301
L A+D ++G+ LW S S+ YA V ++G + +G GL+ + SG
Sbjct: 501 L-WAVDAATGSRLWEVST---DSSPYASPVVADGTLYIGGAHGLIALDAASG 548
>gi|323491634|ref|ZP_08096813.1| outer membrane biogenesis protein BamB [Vibrio brasiliensis LMG
20546]
gi|323314210|gb|EGA67295.1| outer membrane biogenesis protein BamB [Vibrio brasiliensis LMG
20546]
Length = 386
Score = 38.5 bits (88), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 105/258 (40%), Gaps = 43/258 (16%)
Query: 40 SKPLIG-EDGKIYACSEKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAENR 98
S+ IG E+G++ A +E+T G + W +D+D + AP + IV N+
Sbjct: 112 SQVFIGSENGRVLAFNEET-------GELNWQVDVD--GEVLAAPAT--DSNLVIVHTNK 160
Query: 99 VLKVDLLKIGTSES----ATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAF 154
+ + L ++ T E+ +T+V T G V+ S + GR A
Sbjct: 161 GILLALDQV-TGEAKWTISTEVPNLTLRGNSA-------PVTASGGVFWGTANGRLAAAI 212
Query: 155 MTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAH 214
+ GQL+W +G QG T+ D + P+I ++YI G+L ++
Sbjct: 213 VERGQLIWQ-----QPIGMPQGATEIDRLVDVDASPLI--LGSTLYIVGYNGQLTAIDLR 265
Query: 215 SPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKS-------V 267
S W ++ SS + +G + + + A+D SG LW
Sbjct: 266 SGKAAWKRNYSSSTDLVS-----DGSRLFVVTEQDHIAAVDARSGTELWTNDQLENRLVT 320
Query: 268 GPLGSAEYAPVVDSNGWI 285
P+ +Y V DS G++
Sbjct: 321 APVIIEQYLVVGDSEGYL 338
>gi|393764192|ref|ZP_10352804.1| outer membrane biogenesis protein BamB [Alishewanella agri BL06]
gi|392604822|gb|EIW87721.1| outer membrane biogenesis protein BamB [Alishewanella agri BL06]
Length = 395
Score = 38.5 bits (88), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 111/321 (34%), Gaps = 90/321 (28%)
Query: 41 KPLIGEDGKIYACSEKTLFAFE-SNGTIAWSLDLDFTCNIGT------------APVHGG 87
KPLI D A E + AFE S+G W+ DL + T A + GG
Sbjct: 57 KPLILNDKVYMASREGLVVAFELSSGKRLWTFDLRKDDTLSTLQKLRQRFSADNARIAGG 116
Query: 88 T----GEVYIVAENRVLKVDLLKIGTSESAT--------QVFYGTGSGKG------GTGA 129
G +Y+ EN DL+ + A +V G G GTG+
Sbjct: 117 ISHGFGNIYLGTENG----DLVALNAETGALAWRVQVPGEVLVSPAVGDGFVVVKLGTGS 172
Query: 130 IAGIA-------------------------VSTSSSSVYINVKGRALFAFMTHGQLLWSA 164
+ G++ V S VY GR + G W
Sbjct: 173 LIGLSPDNGEQRWIFENEQPPLTIRGVSEPVIDSGGVVYGTANGRVGVLVVDRGFQAWE- 231
Query: 165 GPVLDQLGYRQGCTK----TDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNW 220
+ + +G T DVD P++ G+IY GEL++L S W
Sbjct: 232 ----ENIATPKGSTDLSRLVDVDAK----PIV--IAGTIYTIAFNGELFALDLRSGQQLW 281
Query: 221 IQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILW-------HKSVGPLGSA 273
+D +SF + T+ G + + + A+D +G LW H GP
Sbjct: 282 KRDYASF-RNMTV----QGTVLYLVDSEGRIYAIDRRNGTELWSQTGLHRHFLTGPAVYK 336
Query: 274 EYAPVVDSNG---WISVGSLD 291
+Y V D+ G W+ S D
Sbjct: 337 DYLVVGDNKGNLHWLDRNSGD 357
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.131 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,288,475,261
Number of Sequences: 23463169
Number of extensions: 387791367
Number of successful extensions: 1334730
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 97
Number of HSP's successfully gapped in prelim test: 1024
Number of HSP's that attempted gapping in prelim test: 1313749
Number of HSP's gapped (non-prelim): 16428
length of query: 626
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 477
effective length of database: 8,863,183,186
effective search space: 4227738379722
effective search space used: 4227738379722
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 80 (35.4 bits)