Query 006913
Match_columns 626
No_of_seqs 230 out of 1803
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 12:17:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006913.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006913hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hxj_A Pyrrolo-quinoline quino 99.9 6.7E-25 2.3E-29 225.8 21.7 295 35-380 18-315 (330)
2 3v9f_A Two-component system se 99.9 5.7E-23 2E-27 239.3 34.7 301 37-364 258-582 (781)
3 3hxj_A Pyrrolo-quinoline quino 99.9 4.8E-24 1.6E-28 219.4 21.8 261 36-347 59-320 (330)
4 4a2l_A BT_4663, two-component 99.9 1.8E-22 6.3E-27 235.5 36.8 318 37-377 263-603 (795)
5 4a2l_A BT_4663, two-component 99.9 2.6E-21 8.9E-26 225.8 39.9 286 38-347 216-522 (795)
6 3v9f_A Two-component system se 99.9 1E-20 3.6E-25 220.3 41.1 299 37-357 19-349 (781)
7 3ott_A Two-component system se 99.9 3.6E-20 1.2E-24 215.0 32.3 293 39-357 193-509 (758)
8 3ott_A Two-component system se 99.9 3.8E-19 1.3E-23 206.4 34.5 268 36-338 21-297 (758)
9 3q7m_A Lipoprotein YFGL, BAMB; 99.8 2.9E-18 9.8E-23 181.2 36.6 265 39-347 46-333 (376)
10 3q7m_A Lipoprotein YFGL, BAMB; 99.8 2.2E-18 7.5E-23 182.1 34.0 274 37-345 94-372 (376)
11 2z2n_A Virginiamycin B lyase; 99.7 5.3E-14 1.8E-18 141.3 38.7 270 37-347 15-291 (299)
12 2qc5_A Streptogramin B lactona 99.7 3.3E-14 1.1E-18 142.9 35.9 264 37-338 20-290 (300)
13 1w6s_A Methanol dehydrogenase 99.6 2.7E-12 9.3E-17 145.7 35.8 179 38-224 54-296 (599)
14 1yiq_A Quinohemoprotein alcoho 99.6 3.7E-12 1.3E-16 146.9 36.1 288 38-343 62-541 (689)
15 2z2n_A Virginiamycin B lyase; 99.6 2.7E-11 9.1E-16 121.5 36.5 241 79-357 16-261 (299)
16 2ad6_A Methanol dehydrogenase 99.5 8.1E-12 2.8E-16 141.0 35.4 275 40-340 109-527 (571)
17 3no2_A Uncharacterized protein 99.5 3.2E-12 1.1E-16 130.8 29.0 235 48-308 5-260 (276)
18 1flg_A Protein (quinoprotein e 99.5 1.2E-11 4.1E-16 140.0 36.4 279 40-343 111-552 (582)
19 2ad6_A Methanol dehydrogenase 99.5 2E-11 7E-16 137.8 38.0 221 38-268 54-345 (571)
20 2qc5_A Streptogramin B lactona 99.5 4.8E-11 1.6E-15 119.7 35.9 240 80-357 22-266 (300)
21 1kv9_A Type II quinohemoprotei 99.5 2.3E-11 8E-16 139.7 36.3 178 38-224 58-288 (668)
22 1flg_A Protein (quinoprotein e 99.5 2.6E-11 9.1E-16 137.2 36.2 220 38-268 60-365 (582)
23 1kb0_A Quinohemoprotein alcoho 99.5 1.8E-11 6.3E-16 140.8 35.0 221 38-268 69-356 (677)
24 1kb0_A Quinohemoprotein alcoho 99.5 4.9E-11 1.7E-15 137.3 36.1 275 39-339 121-539 (677)
25 1q7f_A NHL, brain tumor CG1071 99.4 3.2E-10 1.1E-14 114.1 32.3 233 39-299 32-278 (286)
26 1q7f_A NHL, brain tumor CG1071 99.4 3.8E-10 1.3E-14 113.6 31.9 226 81-336 33-267 (286)
27 1pjx_A Dfpase, DIISOPROPYLFLUO 99.4 1.7E-10 6E-15 116.9 27.3 235 37-300 18-298 (314)
28 1rwi_B Serine/threonine-protei 99.3 2.6E-10 8.8E-15 113.3 23.8 229 81-347 27-260 (270)
29 1pjx_A Dfpase, DIISOPROPYLFLUO 99.3 6.7E-10 2.3E-14 112.6 26.2 236 80-347 20-295 (314)
30 2hz6_A Endoplasmic reticulum t 99.3 3.9E-12 1.3E-16 135.5 8.0 229 39-308 2-248 (369)
31 1rwi_B Serine/threonine-protei 99.3 1.4E-09 4.9E-14 107.8 25.9 231 38-300 25-263 (270)
32 1w6s_A Methanol dehydrogenase 99.3 3.2E-09 1.1E-13 120.5 32.0 245 37-292 157-536 (599)
33 1kv9_A Type II quinohemoprotei 99.2 1.4E-09 4.8E-14 124.9 28.1 225 64-307 43-340 (668)
34 3e5z_A Putative gluconolactona 99.2 2.7E-09 9.1E-14 108.2 26.5 233 34-301 25-286 (296)
35 3dsm_A Uncharacterized protein 99.2 9.4E-09 3.2E-13 106.9 31.1 236 41-308 48-309 (328)
36 2dg1_A DRP35, lactonase; beta 99.2 6.6E-09 2.3E-13 106.7 29.5 232 38-299 46-314 (333)
37 3e5z_A Putative gluconolactona 99.2 9.6E-09 3.3E-13 104.1 28.8 199 80-308 30-253 (296)
38 3vgz_A Uncharacterized protein 99.2 2.5E-07 8.6E-12 94.6 39.8 261 40-337 44-332 (353)
39 3no2_A Uncharacterized protein 99.2 5.9E-09 2E-13 106.4 26.8 216 88-337 4-230 (276)
40 3g4e_A Regucalcin; six bladed 99.2 9.7E-09 3.3E-13 105.0 28.4 228 35-292 11-263 (297)
41 2hz6_A Endoplasmic reticulum t 99.2 2.4E-11 8.2E-16 129.3 9.2 189 82-308 4-200 (369)
42 2dg1_A DRP35, lactonase; beta 99.2 9.7E-09 3.3E-13 105.4 28.4 226 81-338 48-299 (333)
43 1yiq_A Quinohemoprotein alcoho 99.2 3.7E-09 1.3E-13 121.8 27.8 227 64-308 47-346 (689)
44 2ghs_A AGR_C_1268P; regucalcin 99.1 5.6E-08 1.9E-12 101.0 31.6 224 36-293 48-294 (326)
45 3g4e_A Regucalcin; six bladed 99.1 9.1E-08 3.1E-12 97.7 30.0 221 80-338 15-261 (297)
46 2fp8_A Strictosidine synthase; 99.1 3.7E-08 1.3E-12 101.7 25.4 234 38-301 20-313 (322)
47 3dr2_A Exported gluconolactona 99.1 2.8E-08 9.5E-13 101.8 24.3 199 80-308 47-274 (305)
48 2fp8_A Strictosidine synthase; 99.0 7.1E-08 2.4E-12 99.5 27.1 237 81-347 22-309 (322)
49 3dsm_A Uncharacterized protein 99.0 3.1E-07 1E-11 95.4 32.0 246 55-337 16-285 (328)
50 2ghs_A AGR_C_1268P; regucalcin 99.0 2.4E-07 8.2E-12 96.1 31.1 218 81-338 52-291 (326)
51 3fvz_A Peptidyl-glycine alpha- 99.0 1.7E-07 5.7E-12 97.2 28.6 252 37-300 24-321 (329)
52 3dr2_A Exported gluconolactona 99.0 3.4E-08 1.2E-12 101.1 21.6 229 34-299 42-304 (305)
53 2be1_A Serine/threonine-protei 98.9 5.6E-09 1.9E-13 110.2 12.7 203 47-267 10-241 (339)
54 3fvz_A Peptidyl-glycine alpha- 98.8 2.1E-06 7.2E-11 88.8 28.7 234 80-336 26-308 (329)
55 3vgz_A Uncharacterized protein 98.7 1.9E-05 6.6E-10 80.4 31.7 223 40-291 92-334 (353)
56 2be1_A Serine/threonine-protei 98.7 2.5E-08 8.5E-13 105.3 9.6 197 88-306 10-237 (339)
57 3b7f_A Glycosyl hydrolase, BNR 98.6 8.5E-06 2.9E-10 86.7 25.1 226 85-337 19-297 (394)
58 3bws_A Protein LP49; two-domai 98.6 0.00023 7.8E-09 75.0 35.7 252 41-334 127-415 (433)
59 3b7f_A Glycosyl hydrolase, BNR 98.5 9.5E-06 3.2E-10 86.3 23.6 232 44-290 19-298 (394)
60 2p4o_A Hypothetical protein; p 98.5 9.5E-05 3.2E-09 75.6 28.4 229 37-291 32-278 (306)
61 1l0q_A Surface layer protein; 98.5 0.0011 3.7E-08 68.7 36.7 238 49-332 3-256 (391)
62 3hrp_A Uncharacterized protein 98.5 0.00017 5.7E-09 77.5 30.7 229 82-336 135-396 (409)
63 2p4o_A Hypothetical protein; p 98.4 0.00023 7.8E-09 72.7 29.5 217 81-338 35-277 (306)
64 3hrp_A Uncharacterized protein 98.4 0.00031 1E-08 75.4 30.8 238 38-297 132-406 (409)
65 3bws_A Protein LP49; two-domai 98.3 0.0017 5.7E-08 68.3 32.4 224 40-299 173-430 (433)
66 1r5m_A SIR4-interacting protei 98.2 0.0027 9.3E-08 65.6 33.1 236 38-300 110-360 (425)
67 1pby_B Quinohemoprotein amine 98.2 0.0012 4.1E-08 66.2 28.6 228 50-307 4-276 (337)
68 3odt_A Protein DOA1; ubiquitin 98.2 0.0063 2.1E-07 60.1 40.2 256 36-333 19-280 (313)
69 1l0q_A Surface layer protein; 98.2 0.0035 1.2E-07 64.8 32.2 230 39-305 34-280 (391)
70 1pby_B Quinohemoprotein amine 98.2 0.0018 6.3E-08 64.8 29.3 231 39-307 36-317 (337)
71 1npe_A Nidogen, entactin; glyc 98.2 0.0026 8.7E-08 63.1 29.8 198 40-267 39-247 (267)
72 1r5m_A SIR4-interacting protei 98.1 0.0074 2.5E-07 62.2 33.9 209 80-306 111-325 (425)
73 1npe_A Nidogen, entactin; glyc 98.1 0.0068 2.3E-07 60.0 31.3 222 50-306 4-244 (267)
74 1gxr_A ESG1, transducin-like e 98.1 0.011 3.6E-07 59.0 35.4 236 39-305 54-301 (337)
75 3v7d_B Cell division control p 98.1 0.018 6.3E-07 61.0 37.5 246 38-305 124-386 (464)
76 1jmx_B Amine dehydrogenase; ox 98.1 0.0016 5.5E-08 65.7 26.3 236 42-306 5-331 (349)
77 4hw6_A Hypothetical protein, I 98.1 0.00053 1.8E-08 74.4 23.8 226 82-336 143-419 (433)
78 3u4y_A Uncharacterized protein 98.1 0.0041 1.4E-07 62.7 29.1 222 47-303 9-255 (331)
79 3nol_A Glutamine cyclotransfer 98.0 0.0023 8E-08 64.7 26.4 177 81-289 46-243 (262)
80 1got_B GT-beta; complex (GTP-b 98.0 0.019 6.6E-07 58.7 39.3 269 41-344 60-336 (340)
81 2qe8_A Uncharacterized protein 98.0 0.0015 5E-08 67.8 25.0 241 38-290 18-309 (343)
82 2qe8_A Uncharacterized protein 98.0 0.0045 1.5E-07 64.1 28.5 229 81-338 20-309 (343)
83 3a9g_A Putative uncharacterize 98.0 0.0032 1.1E-07 66.3 27.3 228 38-290 30-330 (354)
84 1ijq_A LDL receptor, low-densi 98.0 0.0083 2.8E-07 61.7 30.0 197 37-262 30-242 (316)
85 3mbr_X Glutamine cyclotransfer 97.9 0.0076 2.6E-07 60.3 27.9 178 80-289 23-222 (243)
86 2iwa_A Glutamine cyclotransfer 97.9 0.007 2.4E-07 61.4 27.6 188 81-298 24-234 (266)
87 2ovr_B FBW7, F-BOX/WD repeat p 97.9 0.036 1.2E-06 58.6 39.4 255 47-342 169-429 (445)
88 1gxr_A ESG1, transducin-like e 97.9 0.025 8.5E-07 56.3 37.4 233 79-346 53-291 (337)
89 3hfq_A Uncharacterized protein 97.9 0.0077 2.6E-07 61.4 27.7 248 39-305 42-324 (347)
90 3v64_C Agrin; beta propeller, 97.9 0.014 4.8E-07 61.0 29.6 227 45-303 42-278 (349)
91 4hw6_A Hypothetical protein, I 97.9 0.0051 1.7E-07 66.6 26.9 229 40-298 142-430 (433)
92 3v65_B Low-density lipoprotein 97.8 0.01 3.4E-07 63.0 28.6 226 45-303 85-321 (386)
93 3sre_A PON1, serum paraoxonase 97.8 0.0058 2E-07 64.6 26.4 106 189-300 169-297 (355)
94 2p9w_A MAL S 1 allergenic prot 97.8 0.00041 1.4E-08 72.6 17.0 153 189-347 17-211 (334)
95 3nok_A Glutaminyl cyclase; bet 97.8 0.0078 2.7E-07 61.0 25.9 176 81-289 58-253 (268)
96 3u4y_A Uncharacterized protein 97.8 0.017 5.8E-07 58.0 28.3 234 41-304 44-307 (331)
97 3tc9_A Hypothetical hydrolase; 97.8 0.0045 1.5E-07 66.9 25.3 226 82-336 141-416 (430)
98 2xbg_A YCF48-like protein; pho 97.8 0.023 7.8E-07 58.6 29.5 264 9-302 6-280 (327)
99 3mkq_A Coatomer beta'-subunit; 97.7 0.095 3.2E-06 59.7 36.3 237 39-307 16-266 (814)
100 3nol_A Glutamine cyclotransfer 97.7 0.015 5.1E-07 58.8 25.9 175 139-335 52-241 (262)
101 4ery_A WD repeat-containing pr 97.7 0.049 1.7E-06 54.4 37.7 237 39-305 26-273 (312)
102 3odt_A Protein DOA1; ubiquitin 97.7 0.044 1.5E-06 53.9 33.2 185 82-300 109-295 (313)
103 1ijq_A LDL receptor, low-densi 97.7 0.051 1.7E-06 55.7 30.7 226 50-302 4-240 (316)
104 3ow8_A WD repeat-containing pr 97.7 0.057 2E-06 55.0 35.4 255 50-344 51-314 (321)
105 3v64_C Agrin; beta propeller, 97.7 0.023 7.7E-07 59.4 28.2 194 40-262 76-279 (349)
106 1p22_A F-BOX/WD-repeat protein 97.7 0.068 2.3E-06 56.5 31.8 217 47-299 143-363 (435)
107 3zwl_B Eukaryotic translation 97.7 0.06 2E-06 54.1 37.0 229 38-292 34-281 (369)
108 2ovr_B FBW7, F-BOX/WD repeat p 97.7 0.085 2.9E-06 55.7 42.2 230 38-307 121-355 (445)
109 3mbr_X Glutamine cyclotransfer 97.6 0.023 8E-07 56.8 25.7 178 138-338 29-222 (243)
110 3v65_B Low-density lipoprotein 97.6 0.055 1.9E-06 57.2 30.2 221 87-347 86-314 (386)
111 1vyh_C Platelet-activating fac 97.6 0.098 3.3E-06 55.1 34.2 261 42-344 114-404 (410)
112 3tc9_A Hypothetical hydrolase; 97.6 0.019 6.6E-07 61.9 26.8 232 39-299 139-428 (430)
113 3hfq_A Uncharacterized protein 97.6 0.077 2.6E-06 53.8 31.5 235 49-299 4-269 (347)
114 3ei3_B DNA damage-binding prot 97.6 0.046 1.6E-06 56.3 28.3 239 39-306 76-345 (383)
115 2ism_A Putative oxidoreductase 97.6 0.018 6.2E-07 60.3 25.2 229 38-291 32-334 (352)
116 3sov_A LRP-6, low-density lipo 97.6 0.022 7.6E-07 58.8 25.2 186 47-262 46-242 (318)
117 3qqz_A Putative uncharacterize 97.6 0.065 2.2E-06 53.9 27.8 206 37-257 27-252 (255)
118 3vl1_A 26S proteasome regulato 97.5 0.038 1.3E-06 57.4 27.1 246 37-299 98-363 (420)
119 1yfq_A Cell cycle arrest prote 97.5 0.037 1.2E-06 55.5 26.0 267 41-343 16-315 (342)
120 3p5b_L Low density lipoprotein 97.5 0.11 3.8E-06 55.3 30.9 228 47-303 83-323 (400)
121 2ism_A Putative oxidoreductase 97.5 0.027 9.1E-07 59.0 25.5 234 82-339 35-334 (352)
122 2g8s_A Glucose/sorbosone dehyd 97.5 0.015 5E-07 61.0 23.2 241 40-299 21-352 (353)
123 3p5b_L Low density lipoprotein 97.5 0.078 2.7E-06 56.5 29.1 196 40-263 115-325 (400)
124 2pbi_B Guanine nucleotide-bind 97.5 0.14 4.7E-06 52.8 33.3 267 42-344 70-350 (354)
125 1sq9_A Antiviral protein SKI8; 97.4 0.14 4.7E-06 52.5 32.5 249 48-305 27-327 (397)
126 3kya_A Putative phosphatase; s 97.4 0.085 2.9E-06 58.1 29.0 230 82-337 143-462 (496)
127 2p9w_A MAL S 1 allergenic prot 97.4 0.035 1.2E-06 58.0 24.5 210 82-301 17-265 (334)
128 4aez_A CDC20, WD repeat-contai 97.4 0.16 5.6E-06 52.8 30.5 231 39-300 137-379 (401)
129 3ow8_A WD repeat-containing pr 97.4 0.14 4.8E-06 52.0 33.0 221 46-298 90-318 (321)
130 1nir_A Nitrite reductase; hemo 97.4 0.16 5.4E-06 56.3 31.4 236 44-299 145-400 (543)
131 3a9g_A Putative uncharacterize 97.4 0.099 3.4E-06 54.8 27.8 230 82-338 33-330 (354)
132 3i2n_A WD repeat-containing pr 97.4 0.13 4.4E-06 51.6 27.7 233 41-299 23-289 (357)
133 3vl1_A 26S proteasome regulato 97.4 0.093 3.2E-06 54.3 27.2 220 49-300 70-321 (420)
134 1got_B GT-beta; complex (GTP-b 97.3 0.17 6E-06 51.4 32.0 186 83-297 149-339 (340)
135 3zwl_B Eukaryotic translation 97.3 0.16 5.4E-06 50.9 30.9 236 39-299 77-344 (369)
136 3m0c_C LDL receptor, low-densi 97.3 0.098 3.3E-06 61.0 29.6 197 39-262 426-636 (791)
137 3kya_A Putative phosphatase; s 97.3 0.045 1.5E-06 60.3 25.2 246 39-301 141-475 (496)
138 3nok_A Glutaminyl cyclase; bet 97.3 0.014 4.8E-07 59.1 19.5 111 190-308 60-172 (268)
139 4gqb_B Methylosome protein 50; 97.3 0.21 7.1E-06 51.6 30.5 196 82-303 87-292 (344)
140 2iwa_A Glutamine cyclotransfer 97.3 0.026 8.9E-07 57.2 20.7 112 190-307 26-142 (266)
141 4g56_B MGC81050 protein; prote 97.2 0.083 2.8E-06 54.6 24.8 199 81-305 98-306 (357)
142 3sov_A LRP-6, low-density lipo 97.2 0.085 2.9E-06 54.4 24.7 187 88-303 46-241 (318)
143 1sq9_A Antiviral protein SKI8; 97.2 0.26 9E-06 50.3 28.2 159 131-299 189-393 (397)
144 1k8k_C P40, ARP2/3 complex 41 97.2 0.24 8.3E-06 49.9 28.9 201 80-306 11-239 (372)
145 2ymu_A WD-40 repeat protein; u 97.1 0.41 1.4E-05 51.9 41.0 260 43-346 269-534 (577)
146 1k8k_C P40, ARP2/3 complex 41 97.1 0.27 9.3E-06 49.5 34.1 233 40-299 12-272 (372)
147 1jmx_B Amine dehydrogenase; ox 97.1 0.092 3.1E-06 52.6 23.5 214 39-268 45-335 (349)
148 4a11_B DNA excision repair pro 97.1 0.28 9.6E-06 49.9 27.5 270 39-345 46-359 (408)
149 3m0c_C LDL receptor, low-densi 97.1 0.33 1.1E-05 56.5 30.6 228 47-302 395-634 (791)
150 2ymu_A WD-40 repeat protein; u 97.1 0.48 1.7E-05 51.3 40.6 255 46-344 190-450 (577)
151 2xbg_A YCF48-like protein; pho 97.1 0.081 2.8E-06 54.4 22.7 229 39-299 82-320 (327)
152 3sre_A PON1, serum paraoxonase 97.1 0.33 1.1E-05 51.0 27.6 188 43-256 56-296 (355)
153 4a0p_A LRP6, LRP-6, low-densit 97.1 0.12 4.2E-06 58.5 26.0 188 42-261 42-240 (628)
154 1p22_A F-BOX/WD-repeat protein 97.0 0.42 1.5E-05 50.2 32.2 184 88-306 142-331 (435)
155 3sfz_A APAF-1, apoptotic pepti 97.0 0.32 1.1E-05 58.5 30.9 243 45-304 807-1078(1249)
156 3sfz_A APAF-1, apoptotic pepti 97.0 1.1 3.6E-05 53.9 36.6 231 39-300 618-870 (1249)
157 4aez_A CDC20, WD repeat-contai 97.0 0.44 1.5E-05 49.5 36.4 221 47-300 103-335 (401)
158 1ri6_A Putative isomerase YBHE 96.9 0.37 1.3E-05 47.8 30.1 226 48-300 5-261 (343)
159 3sjl_D Methylamine dehydrogena 96.9 0.57 1.9E-05 49.9 31.2 240 42-308 83-371 (386)
160 3mkq_A Coatomer beta'-subunit; 96.9 0.47 1.6E-05 53.8 29.8 197 80-305 16-222 (814)
161 4gqb_B Methylosome protein 50; 96.9 0.3 1E-05 50.3 25.7 160 131-303 85-249 (344)
162 4a11_B DNA excision repair pro 96.9 0.44 1.5E-05 48.4 26.7 236 47-300 111-364 (408)
163 1pgu_A Actin interacting prote 96.9 0.68 2.3E-05 50.2 31.8 236 39-304 67-332 (615)
164 2aq5_A Coronin-1A; WD40 repeat 96.9 0.49 1.7E-05 49.0 27.1 103 197-300 145-253 (402)
165 2ynn_A Coatomer subunit beta'; 96.8 0.45 1.6E-05 47.5 35.5 236 39-306 16-265 (304)
166 3das_A Putative oxidoreductase 96.8 0.32 1.1E-05 51.1 24.7 230 36-291 31-327 (347)
167 4g56_B MGC81050 protein; prote 96.8 0.32 1.1E-05 50.1 24.7 158 131-302 97-260 (357)
168 3iz6_a 40S ribosomal protein R 96.8 0.63 2.2E-05 48.1 29.5 282 42-345 72-369 (380)
169 1vyh_C Platelet-activating fac 96.7 0.74 2.5E-05 48.2 33.0 227 82-347 113-365 (410)
170 1nir_A Nitrite reductase; hemo 96.7 0.51 1.7E-05 52.2 27.0 191 85-307 145-362 (543)
171 3c75_H MADH, methylamine dehyd 96.7 0.75 2.6E-05 49.6 27.3 250 47-306 84-408 (426)
172 3v7d_B Cell division control p 96.6 0.88 3E-05 47.8 40.4 239 41-305 167-426 (464)
173 3k26_A Polycomb protein EED; W 96.6 0.67 2.3E-05 46.3 26.8 238 48-299 85-364 (366)
174 4ery_A WD repeat-containing pr 96.6 0.68 2.3E-05 45.9 32.7 217 41-287 70-295 (312)
175 1n7d_A LDL receptor, low-densi 96.6 0.028 9.6E-07 64.6 15.8 197 39-263 408-619 (699)
176 1erj_A Transcriptional repress 96.5 0.95 3.2E-05 47.0 37.4 236 40-305 68-346 (393)
177 3dm0_A Maltose-binding peripla 96.5 1.5 5.2E-05 49.2 35.4 195 80-301 433-632 (694)
178 2pm9_A Protein WEB1, protein t 96.5 0.24 8.1E-06 51.0 21.3 244 39-300 70-336 (416)
179 2vdu_B TRNA (guanine-N(7)-)-me 96.5 1.1 3.7E-05 47.4 31.6 196 80-299 105-337 (450)
180 1yfq_A Cell cycle arrest prote 96.5 0.79 2.7E-05 45.5 25.3 191 80-299 14-223 (342)
181 1n7d_A LDL receptor, low-densi 96.5 0.023 7.9E-07 65.3 14.3 230 48-305 378-619 (699)
182 3jrp_A Fusion protein of prote 96.4 0.89 3E-05 45.6 26.1 235 39-300 14-286 (379)
183 3i2n_A WD repeat-containing pr 96.4 0.27 9.4E-06 49.1 20.7 186 48-259 81-292 (357)
184 3scy_A Hypothetical bacterial 96.4 0.96 3.3E-05 45.9 30.7 114 189-304 215-343 (361)
185 3s94_A LRP-6, low-density lipo 96.4 1.2 4.2E-05 50.1 27.9 186 47-261 360-554 (619)
186 4a0p_A LRP6, LRP-6, low-densit 96.4 1.9 6.4E-05 48.7 31.7 221 49-302 8-239 (628)
187 3frx_A Guanine nucleotide-bind 96.4 0.97 3.3E-05 45.4 36.2 233 80-344 68-310 (319)
188 3qqz_A Putative uncharacterize 96.3 1 3.5E-05 45.0 29.1 201 80-300 29-252 (255)
189 1pgu_A Actin interacting prote 96.3 1.6 5.5E-05 47.2 32.3 239 39-306 21-289 (615)
190 1cru_A Protein (soluble quinop 96.3 0.13 4.3E-06 56.0 18.2 100 189-290 31-162 (454)
191 3s94_A LRP-6, low-density lipo 96.3 0.41 1.4E-05 54.0 22.8 194 40-261 43-246 (619)
192 3gre_A Serine/threonine-protei 96.2 1.5 5.2E-05 45.5 28.0 148 139-300 182-358 (437)
193 2ecf_A Dipeptidyl peptidase IV 96.1 2.4 8.2E-05 47.6 36.1 245 37-302 37-370 (741)
194 2aq5_A Coronin-1A; WD40 repeat 96.1 1.4 4.8E-05 45.4 24.5 199 80-300 84-298 (402)
195 4aow_A Guanine nucleotide-bind 96.1 1.3 4.4E-05 43.8 35.9 234 80-344 89-330 (340)
196 3dm0_A Maltose-binding peripla 96.0 2.6 9E-05 47.2 30.1 195 42-265 436-639 (694)
197 3dwl_C Actin-related protein 2 96.0 0.12 4E-06 52.8 15.6 238 40-300 15-280 (377)
198 1qks_A Cytochrome CD1 nitrite 96.0 2.6 9E-05 46.9 30.0 237 44-300 163-420 (567)
199 3mmy_A MRNA export factor; mRN 95.8 1.7 5.7E-05 43.2 32.5 257 37-335 40-331 (368)
200 3sjl_D Methylamine dehydrogena 95.8 2.4 8.2E-05 45.0 24.8 211 42-268 142-373 (386)
201 2pm9_A Protein WEB1, protein t 95.8 0.95 3.2E-05 46.3 21.3 204 80-305 70-299 (416)
202 2mad_H Methylamine dehydrogena 95.8 2.4 8.1E-05 44.3 32.5 237 41-305 70-355 (373)
203 2ynn_A Coatomer subunit beta'; 95.6 2 6.7E-05 42.7 30.7 197 80-304 16-221 (304)
204 2hqs_A Protein TOLB; TOLB, PAL 95.6 2.7 9.2E-05 44.2 25.6 211 56-304 159-390 (415)
205 4aow_A Guanine nucleotide-bind 95.6 2 6.8E-05 42.4 29.9 226 42-298 92-334 (340)
206 1erj_A Transcriptional repress 95.6 2.6 8.8E-05 43.6 31.7 201 41-265 128-348 (393)
207 1ri6_A Putative isomerase YBHE 95.4 1.4 4.9E-05 43.4 20.5 112 190-304 43-165 (343)
208 3k26_A Polycomb protein EED; W 95.2 2.8 9.7E-05 41.6 29.6 264 47-345 34-360 (366)
209 2xzm_R RACK1; ribosome, transl 95.1 3.1 0.00011 41.9 28.4 189 42-260 82-287 (343)
210 3jrp_A Fusion protein of prote 95.1 3 0.0001 41.6 24.3 194 80-300 14-239 (379)
211 3q6k_A 43.2 kDa salivary prote 95.1 4.2 0.00014 43.1 24.5 72 37-108 87-192 (381)
212 3das_A Putative oxidoreductase 94.9 0.79 2.7E-05 48.0 17.3 112 190-302 37-184 (347)
213 1qks_A Cytochrome CD1 nitrite 94.9 6 0.00021 44.0 29.9 193 86-308 164-381 (567)
214 4e54_B DNA damage-binding prot 94.8 4.7 0.00016 42.2 23.5 228 47-300 176-429 (435)
215 1tl2_A L10, protein (tachylect 94.6 0.098 3.3E-06 51.6 8.6 105 41-155 45-160 (236)
216 3f3f_A Nucleoporin SEH1; struc 94.6 3.7 0.00013 39.9 27.9 197 80-300 14-248 (351)
217 3mmy_A MRNA export factor; mRN 94.5 4.2 0.00014 40.2 26.1 219 42-291 92-336 (368)
218 2g8s_A Glucose/sorbosone dehyd 94.3 0.46 1.6E-05 49.5 13.7 112 189-302 22-174 (353)
219 2pbi_B Guanine nucleotide-bind 94.3 5.3 0.00018 40.6 27.6 186 83-297 160-353 (354)
220 3lrv_A PRE-mRNA-splicing facto 94.2 5.2 0.00018 40.2 28.2 188 91-300 51-243 (343)
221 3hx6_A Type 4 fimbrial biogene 94.2 1.1 3.7E-05 49.9 16.7 161 138-300 84-283 (570)
222 3iz6_a 40S ribosomal protein R 94.2 5.8 0.0002 40.6 25.8 190 90-300 172-374 (380)
223 4gga_A P55CDC, cell division c 94.1 6.2 0.00021 40.9 38.2 260 47-346 116-390 (420)
224 2ojh_A Uncharacterized protein 94.0 4.3 0.00015 38.5 22.6 209 56-300 22-257 (297)
225 3dwl_C Actin-related protein 2 94.0 1.3 4.3E-05 44.9 16.2 192 80-300 14-235 (377)
226 3ei3_B DNA damage-binding prot 94.0 6 0.00021 40.0 27.8 152 131-300 76-235 (383)
227 3jro_A Fusion protein of prote 93.7 5.5 0.00019 45.4 22.5 232 44-300 17-284 (753)
228 3gre_A Serine/threonine-protei 93.5 8 0.00027 39.9 26.2 108 196-305 182-297 (437)
229 2vdu_B TRNA (guanine-N(7)-)-me 93.4 8.7 0.0003 40.2 30.6 226 39-291 105-373 (450)
230 3lrv_A PRE-mRNA-splicing facto 93.2 7.7 0.00026 38.9 22.5 175 140-334 49-229 (343)
231 1cru_A Protein (soluble quinop 93.2 1.7 5.9E-05 46.9 16.2 147 82-246 31-246 (454)
232 1tl2_A L10, protein (tachylect 93.0 0.24 8.3E-06 48.8 8.0 151 133-299 45-208 (236)
233 3fm0_A Protein CIAO1; WDR39,SG 92.8 8.9 0.0003 38.6 21.2 151 131-298 64-222 (345)
234 4h5i_A Guanine nucleotide-exch 92.7 9.9 0.00034 38.8 23.6 189 82-298 138-340 (365)
235 3scy_A Hypothetical bacterial 92.5 9.7 0.00033 38.2 33.3 108 190-298 160-288 (361)
236 3frx_A Guanine nucleotide-bind 92.3 9.9 0.00034 37.8 32.3 223 43-298 72-314 (319)
237 2z3z_A Dipeptidyl aminopeptida 92.2 17 0.00057 40.4 30.4 65 39-106 84-150 (706)
238 2z3z_A Dipeptidyl aminopeptida 92.2 17 0.00057 40.4 32.9 99 206-304 235-347 (706)
239 4e54_B DNA damage-binding prot 92.2 2.4 8.1E-05 44.5 15.3 139 197-344 133-275 (435)
240 2xyi_A Probable histone-bindin 91.9 13 0.00046 38.6 25.8 101 196-300 244-352 (430)
241 1nr0_A Actin interacting prote 91.5 19 0.00065 39.5 33.8 154 130-301 149-313 (611)
242 3c75_H MADH, methylamine dehyd 91.4 7.3 0.00025 41.7 18.2 113 138-268 83-219 (426)
243 2xyi_A Probable histone-bindin 91.4 15 0.00052 38.1 22.8 156 80-258 184-353 (430)
244 3jro_A Fusion protein of prote 91.3 11 0.00037 42.9 20.8 102 196-300 67-188 (753)
245 1nr0_A Actin interacting prote 91.1 21 0.00071 39.2 30.7 225 50-300 163-396 (611)
246 2xzm_R RACK1; ribosome, transl 90.5 15 0.00052 36.7 33.9 192 80-300 79-284 (343)
247 1jof_A Carboxy-CIS,CIS-muconat 90.5 16 0.00055 37.0 21.8 136 190-332 45-205 (365)
248 3dw8_B Serine/threonine-protei 90.2 18 0.00061 37.0 27.9 164 132-305 181-378 (447)
249 3f3f_A Nucleoporin SEH1; struc 90.0 14 0.00049 35.6 26.7 206 40-259 15-250 (351)
250 3dw8_B Serine/threonine-protei 88.6 23 0.00079 36.1 26.7 167 80-263 180-378 (447)
251 4ggc_A P55CDC, cell division c 88.4 19 0.00064 34.7 38.0 260 47-346 36-310 (318)
252 3elq_A Arylsulfate sulfotransf 88.3 19 0.00066 40.0 18.7 151 149-308 175-392 (571)
253 3o4h_A Acylamino-acid-releasin 88.2 32 0.0011 37.2 21.9 106 190-302 155-276 (582)
254 3elq_A Arylsulfate sulfotransf 88.2 36 0.0012 37.8 24.8 117 46-166 216-393 (571)
255 4gga_A P55CDC, cell division c 87.3 29 0.00098 35.7 29.8 190 88-305 116-315 (420)
256 3q6k_A 43.2 kDa salivary prote 87.2 32 0.0011 36.2 27.0 249 33-289 22-341 (381)
257 2oaj_A Protein SNI1; WD40 repe 86.9 52 0.0018 38.3 26.8 195 80-305 20-247 (902)
258 1k32_A Tricorn protease; prote 86.8 56 0.0019 38.5 24.9 221 41-293 249-494 (1045)
259 2ecf_A Dipeptidyl peptidase IV 86.2 46 0.0016 36.9 28.3 66 39-107 111-182 (741)
260 2oiz_A Aromatic amine dehydrog 85.6 34 0.0012 34.9 33.3 232 41-301 54-335 (361)
261 1k3i_A Galactose oxidase precu 83.0 47 0.0016 36.9 19.1 63 43-107 249-324 (656)
262 3o4h_A Acylamino-acid-releasin 81.9 26 0.0009 37.8 16.1 102 196-304 122-231 (582)
263 2ojh_A Uncharacterized protein 81.9 34 0.0012 32.0 24.5 150 131-301 44-206 (297)
264 2mad_H Methylamine dehydrogena 81.5 52 0.0018 33.9 33.4 250 48-336 33-335 (373)
265 1sqj_A OXG-RCBH, oligoxylogluc 81.4 82 0.0028 36.1 26.5 244 37-302 15-334 (789)
266 3amr_A 3-phytase; beta-propell 80.6 58 0.002 33.9 22.4 74 190-263 185-269 (355)
267 2oaj_A Protein SNI1; WD40 repe 79.6 98 0.0034 35.9 25.6 152 131-304 20-186 (902)
268 2hqs_A Protein TOLB; TOLB, PAL 78.5 66 0.0022 33.3 30.8 150 131-303 181-347 (415)
269 3amr_A 3-phytase; beta-propell 78.4 68 0.0023 33.4 22.6 143 139-300 39-209 (355)
270 2oiz_A Aromatic amine dehydrog 78.3 62 0.0021 32.9 25.0 86 190-283 259-359 (361)
271 1jof_A Carboxy-CIS,CIS-muconat 77.7 61 0.0021 32.5 28.2 75 229-303 146-229 (365)
272 4asc_A Kelch repeat and BTB do 77.4 58 0.002 32.0 27.4 181 90-302 6-222 (315)
273 2cn3_A Xyloglucanase, beta-1,4 77.2 1E+02 0.0035 34.9 26.4 207 79-303 24-285 (737)
274 1k32_A Tricorn protease; prote 75.8 1.3E+02 0.0044 35.3 28.0 101 196-301 348-461 (1045)
275 3vu4_A KMHSV2; beta-propeller 75.4 70 0.0024 32.0 26.2 221 38-299 21-269 (355)
276 4h5i_A Guanine nucleotide-exch 75.0 74 0.0025 32.1 29.7 191 131-347 136-339 (365)
277 1mda_H Methylamine dehydrogena 74.6 22 0.00074 37.1 12.0 103 196-301 31-158 (368)
278 3a0f_A Xyloglucanase; beta-pro 74.1 50 0.0017 37.8 15.9 184 47-252 556-757 (763)
279 3s25_A Hypothetical 7-bladed b 73.2 80 0.0027 31.7 27.8 176 83-303 20-218 (302)
280 3a0f_A Xyloglucanase; beta-pro 72.1 1.4E+02 0.0048 34.0 25.8 248 36-302 20-346 (763)
281 2ece_A 462AA long hypothetical 71.3 1.2E+02 0.004 32.8 26.6 256 28-299 2-350 (462)
282 1xfd_A DIP, dipeptidyl aminope 70.5 1.3E+02 0.0045 33.0 20.2 92 207-298 229-341 (723)
283 3fm0_A Protein CIAO1; WDR39,SG 70.3 89 0.003 31.0 24.0 112 189-300 66-180 (345)
284 3pe7_A Oligogalacturonate lyas 70.2 90 0.0031 31.0 28.0 65 42-108 41-113 (388)
285 2wg3_C Hedgehog-interacting pr 69.8 1.1E+02 0.0039 32.6 16.7 94 198-291 28-158 (463)
286 2cn3_A Xyloglucanase, beta-1,4 69.4 1.5E+02 0.0053 33.4 25.4 253 38-302 24-338 (737)
287 3ogk_Q JAZ1 incomplete degron 68.7 1.9 6.4E-05 26.5 1.2 13 428-440 2-14 (22)
288 3s25_A Hypothetical 7-bladed b 67.0 1.1E+02 0.0037 30.7 29.5 211 43-303 21-257 (302)
289 2uvk_A YJHT; unknown function, 64.8 1.2E+02 0.004 30.3 28.3 61 46-107 18-96 (357)
290 2woz_A Kelch repeat and BTB do 63.2 1.2E+02 0.004 29.8 24.4 209 88-335 15-258 (318)
291 3pe7_A Oligogalacturonate lyas 63.1 1.2E+02 0.0042 29.9 22.5 109 190-302 86-226 (388)
292 3ogl_Q JAZ1 incomplete degron 61.3 2.4 8.3E-05 25.6 0.7 12 428-439 7-18 (21)
293 3azo_A Aminopeptidase; POP fam 60.9 1.9E+02 0.0064 31.4 16.7 96 206-304 161-278 (662)
294 4asc_A Kelch repeat and BTB do 60.7 1.3E+02 0.0044 29.4 29.9 204 49-288 6-249 (315)
295 1sqj_A OXG-RCBH, oligoxylogluc 59.2 2.4E+02 0.0083 32.1 22.6 207 79-303 16-271 (789)
296 3hx6_A Type 4 fimbrial biogene 59.1 1.8E+02 0.0062 32.2 15.7 96 57-157 165-283 (570)
297 2klu_A T-cell surface glycopro 56.3 1.7 5.8E-05 34.0 -0.8 24 401-424 14-37 (70)
298 2j04_B YDR362CP, TAU91; beta p 55.1 2.3E+02 0.0078 30.5 16.0 151 131-301 269-428 (524)
299 2oit_A Nucleoporin 214KDA; NH2 53.9 1.3E+02 0.0046 31.3 13.4 74 229-305 151-227 (434)
300 3ii7_A Kelch-like protein 7; p 53.4 1.6E+02 0.0056 28.4 27.0 181 46-259 54-273 (306)
301 1mda_H Methylamine dehydrogena 51.9 43 0.0015 34.8 8.9 76 191-268 270-356 (368)
302 2xdw_A Prolyl endopeptidase; a 51.4 2.8E+02 0.0097 30.5 28.5 105 196-302 297-416 (710)
303 3azo_A Aminopeptidase; POP fam 50.5 2.7E+02 0.0093 30.0 31.1 113 188-302 191-326 (662)
304 2vpj_A Kelch-like protein 12; 48.9 1.9E+02 0.0064 27.8 26.7 184 46-260 61-280 (301)
305 2xdw_A Prolyl endopeptidase; a 47.6 3.2E+02 0.011 30.1 24.9 113 190-304 238-372 (710)
306 2xzh_A Clathrin heavy chain 1; 45.3 81 0.0028 32.8 9.4 58 236-307 269-329 (365)
307 2j04_B YDR362CP, TAU91; beta p 44.9 94 0.0032 33.7 10.7 103 196-300 277-385 (524)
308 4ggc_A P55CDC, cell division c 44.1 2.1E+02 0.0072 26.9 31.2 146 87-260 35-183 (318)
309 2xn4_A Kelch-like protein 2; s 44.0 2.3E+02 0.0077 27.3 27.1 186 46-265 60-281 (302)
310 2k9y_A Ephrin type-A receptor 43.4 3.1 0.00011 29.2 -1.1 13 413-425 29-41 (41)
311 2vpj_A Kelch-like protein 12; 41.2 2.5E+02 0.0084 26.9 31.1 212 57-300 32-277 (301)
312 1xip_A Nucleoporin NUP159; bet 40.3 2.4E+02 0.0083 29.3 12.6 101 190-303 93-193 (388)
313 3bg1_A Protein SEC13 homolog; 38.9 1.7E+02 0.0056 28.5 10.6 112 187-298 16-133 (316)
314 4a9v_A PHOX; hydrolase, beta-p 38.6 63 0.0022 36.0 7.9 56 190-246 481-550 (592)
315 1gk7_A Vimentin; intermediate 38.0 11 0.00039 26.4 1.2 25 430-454 14-38 (39)
316 3vu4_A KMHSV2; beta-propeller 37.7 3.1E+02 0.011 27.1 27.7 176 55-259 80-272 (355)
317 1bpo_A Protein (clathrin); cla 36.6 1.3E+02 0.0046 32.5 9.7 58 236-307 268-328 (494)
318 2hes_X YDR267CP; beta-propelle 36.3 3.1E+02 0.011 26.6 28.4 229 49-300 26-279 (330)
319 3c5m_A Oligogalacturonate lyas 36.0 3.2E+02 0.011 26.7 18.9 68 190-262 243-333 (396)
320 2oqq_A Transcription factor HY 35.8 32 0.0011 24.3 3.2 32 440-471 7-38 (42)
321 2ece_A 462AA long hypothetical 35.7 3.8E+02 0.013 28.8 13.2 108 196-304 95-241 (462)
322 2xn4_A Kelch-like protein 2; s 34.1 3.2E+02 0.011 26.1 31.5 221 47-302 15-277 (302)
323 1fwx_A Nitrous oxide reductase 32.0 3.3E+02 0.011 30.2 12.4 93 196-291 101-215 (595)
324 1xfd_A DIP, dipeptidyl aminope 30.4 2.1E+02 0.0073 31.2 10.8 108 196-304 27-147 (723)
325 1zgk_A Kelch-like ECH-associat 26.9 4.3E+02 0.015 25.4 28.0 182 46-259 69-288 (308)
326 3f6k_A Sortilin; protein sorti 26.8 7.2E+02 0.025 27.9 18.5 140 130-289 46-194 (685)
327 4a9v_A PHOX; hydrolase, beta-p 25.8 2.2E+02 0.0074 31.7 9.4 32 276-307 480-525 (592)
328 1z68_A Fibroblast activation p 25.5 4.4E+02 0.015 28.7 12.3 108 138-262 25-143 (719)
329 2hes_X YDR267CP; beta-propelle 25.4 4.7E+02 0.016 25.3 28.5 196 80-299 110-326 (330)
330 2l2t_A Receptor tyrosine-prote 24.8 7.4 0.00025 28.1 -1.7 11 418-428 31-41 (44)
331 3lb6_C IL-13, interleukin-13 r 24.6 16 0.00054 38.1 0.0 32 397-430 341-372 (380)
332 1zgk_A Kelch-like ECH-associat 24.3 4.8E+02 0.016 25.0 32.8 220 46-300 23-286 (308)
333 2uvk_A YJHT; unknown function, 24.2 5.1E+02 0.017 25.3 22.0 91 138-245 18-125 (357)
334 2j04_A TAU60, YPL007P, hypothe 24.1 7.6E+02 0.026 27.3 26.4 150 137-304 95-257 (588)
335 1z68_A Fibroblast activation p 24.0 1.6E+02 0.0056 32.3 8.3 104 196-303 26-142 (719)
336 3zwu_A Alkaline phosphatase PH 23.3 2.1E+02 0.0072 31.8 8.9 58 232-290 480-550 (592)
337 2pm7_B Protein transport prote 23.0 4.9E+02 0.017 24.6 21.5 100 197-299 68-187 (297)
338 4gq1_A NUP37; propeller, trans 22.0 6E+02 0.02 25.3 12.2 99 199-300 104-217 (393)
339 3c5m_A Oligogalacturonate lyas 21.6 5.6E+02 0.019 24.8 26.1 89 207-300 217-328 (396)
340 1k3i_A Galactose oxidase precu 21.1 8.2E+02 0.028 26.6 26.8 70 84-164 249-328 (656)
341 2wg3_C Hedgehog-interacting pr 20.7 1.4E+02 0.0047 32.0 6.6 51 196-246 293-354 (463)
342 2ks1_B Epidermal growth factor 20.4 10 0.00035 27.3 -1.7 11 418-428 32-42 (44)
343 4a5s_A Dipeptidyl peptidase 4 20.4 4.4E+02 0.015 29.2 11.1 101 196-300 27-140 (740)
344 2zux_A YESW protein; beta-prop 20.3 9E+02 0.031 26.7 14.1 60 208-268 231-313 (591)
No 1
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.93 E-value=6.7e-25 Score=225.76 Aligned_cols=295 Identities=20% Similarity=0.314 Sum_probs=205.3
Q ss_pred CCceeeeeEEeeCCEEEEEe-CCcEEEEcCCCCEEEEEeCCCCCCcccCeEEecCCeEEEEECCeEEEEECCCCccccce
Q 006913 35 SAFRLSKPLIGEDGKIYACS-EKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAENRVLKVDLLKIGTSESA 113 (626)
Q Consensus 35 ~~~~~Sspvid~dG~IwIgS-dggL~a~d~~G~~~W~~~~~~~~~i~~sp~iD~dG~IwVgT~ggL~~id~~~~~~~~~~ 113 (626)
...+.++|++|.+|.||+++ +++|+++|.+|+..|.+..+. ....+++++.+|.||+++.+ |+++|+. +..
T Consensus 18 ~~~~~~~~~~d~~g~l~v~t~~~~l~~~d~~g~~~~~~~~~~--~~~~~~~~~~~g~l~v~t~~-l~~~d~~-g~~---- 89 (330)
T 3hxj_A 18 GNSIDSSPILAKNGTIYLGSSNKNLYAINTDGSVKWFFKSGE--IIECRPSIGKDGTIYFGSDK-VYAINPD-GTE---- 89 (330)
T ss_dssp CEEECCCCEECTTSCEECSSTTTTTEEECTTSCEEESSCGGG--EEEECCEETTTTEECCSSCE-EEEECCC-GGG----
T ss_pred CCCcccCceEccCCeEEEEcCCCEEEEECCCCcEEEEEecCC--CcccceEEecCCcEEEecCc-EEEECCC-CcE----
Confidence 44678899999999999998 678999998899999765432 34568888889999999976 9999874 332
Q ss_pred eEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEcCCeEEEEeCCCcEEEEECCcccccccccccccCCCCCccccceEEE
Q 006913 114 TQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVID 193 (626)
Q Consensus 114 ~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~~gGL~a~d~~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD 193 (626)
.|.+... ......+... ++.||+++.+++|+++|++|+..|.... + .....+++++
T Consensus 90 -~~~~~~~------~~~~~~~~~~-~~~l~v~t~~~~l~~~d~~g~~~~~~~~-----~-----------~~~~~~~~~~ 145 (330)
T 3hxj_A 90 -KWRFDTK------KAIVSDFTIF-EDILYVTSMDGHLYAINTDGTEKWRFKT-----K-----------KAIYATPIVS 145 (330)
T ss_dssp -GGGSCC-----------CCEEEE-TTEEEEECTTSEEEEECTTSCEEEEEEC-----S-----------SCCCSCCEEC
T ss_pred -EEEEECC------CCcccCceEE-CCEEEEEecCCEEEEEcCCCCEEEEEcC-----C-----------CceeeeeEEc
Confidence 1211110 1111222223 8999999988999999988989997511 0 1123567888
Q ss_pred cCCCeEEEEcCCCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCCeEEEEEcCCCEEEEEECCCCcEEEEEecCCCCCc
Q 006913 194 QCEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSA 273 (626)
Q Consensus 194 ~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~~ 273 (626)
. +|.||+|+.+++|+++|++ ++..|...... ..+.+++.|.+|+||+++ +.++++| .+|+..|...... ..
T Consensus 146 ~-~g~l~vgt~~~~l~~~d~~-g~~~~~~~~~~-~~~~~~~~d~~g~l~v~t---~~l~~~d-~~g~~~~~~~~~~--~~ 216 (330)
T 3hxj_A 146 E-DGTIYVGSNDNYLYAINPD-GTEKWRFKTND-AITSAASIGKDGTIYFGS---DKVYAIN-PDGTEKWNFYAGY--WT 216 (330)
T ss_dssp T-TSCEEEECTTSEEEEECTT-SCEEEEEECSS-CCCSCCEECTTCCEEEES---SSEEEEC-TTSCEEEEECCSS--CC
T ss_pred C-CCEEEEEcCCCEEEEECCC-CCEeEEEecCC-CceeeeEEcCCCEEEEEe---CEEEEEC-CCCcEEEEEccCC--cc
Confidence 5 8999999988999999999 78889876432 234567788899999998 5788899 7899999876542 23
Q ss_pred eeeEEEeeCCeEEEEEcCCeEEEEcCCCCEEEEeeccCCCCccccCceEEEEEEecCCcEEEEEeeecCeeEEecccCC-
Q 006913 274 EYAPVVDSNGWISVGSLDGLLYSFSPSGVLNKFSKSDTSDSVIQSSPYWFHLLGPSIGLKAILCLMVVGQFSSLLSKSD- 352 (626)
Q Consensus 274 ~sspvvD~dG~IWVGT~~gGLy~~d~~g~~~~~~~~~~~~~~ilssp~V~~Il~DsdG~IwI~T~t~~Ggl~~~~~~~d- 352 (626)
..+++++.+|.||+||.+++|++++++++..|..... .. ...+ ++.+.+|+||+++. .|++..+...+.
T Consensus 217 ~~~~~~~~~g~l~v~t~~~gl~~~~~~g~~~~~~~~~--~~-~~~~-----~~~~~~g~l~v~t~--~ggl~~~d~~g~~ 286 (330)
T 3hxj_A 217 VTRPAISEDGTIYVTSLDGHLYAINPDGTEKWRFKTG--KR-IESS-----PVIGNTDTIYFGSY--DGHLYAINPDGTE 286 (330)
T ss_dssp CSCCEECTTSCEEEEETTTEEEEECTTSCEEEEEECS--SC-CCSC-----CEECTTSCEEEECT--TCEEEEECTTSCE
T ss_pred eeceEECCCCeEEEEcCCCeEEEECCCCCEeEEeeCC--CC-cccc-----ceEcCCCeEEEecC--CCCEEEECCCCcE
Confidence 5668889889999999999999999888888865521 11 1222 44578999987653 467766544333
Q ss_pred cceeeecCceeeeeec-cccceeeeeecc
Q 006913 353 LQHFVLDESLVLAFLT-ASNQKLVASCSQ 380 (626)
Q Consensus 353 ~~~f~~d~gli~~~~~-a~~~~~~~~~~~ 380 (626)
...+......+..++. ..+...+++-.+
T Consensus 287 ~~~~~~~~~~~~~~~~d~~g~l~~gt~~G 315 (330)
T 3hxj_A 287 KWNFETGSWIIATPVIDENGTIYFGTRNG 315 (330)
T ss_dssp EEEEECSSCCCSCCEECTTCCEEEECTTS
T ss_pred EEEEEcCCccccceEEcCCCEEEEEcCCC
Confidence 3334433333333333 445555554443
No 2
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.92 E-value=5.7e-23 Score=239.34 Aligned_cols=301 Identities=12% Similarity=0.116 Sum_probs=203.5
Q ss_pred ceeeeeEEeeCCEEEEEeC-CcEEEEcC-CCCEEEEEe-------CC---C--CCCcccCeEEecCCeEEEEE-CCeEEE
Q 006913 37 FRLSKPLIGEDGKIYACSE-KTLFAFES-NGTIAWSLD-------LD---F--TCNIGTAPVHGGTGEVYIVA-ENRVLK 101 (626)
Q Consensus 37 ~~~Sspvid~dG~IwIgSd-ggL~a~d~-~G~~~W~~~-------~~---~--~~~i~~sp~iD~dG~IwVgT-~ggL~~ 101 (626)
....+.++|.+|.||+|+. +||++++. ++.+..... .. . ....+.++++|.+|+||+|| ++||++
T Consensus 258 ~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~lWigt~~~Gl~~ 337 (781)
T 3v9f_A 258 SYIFSIKQLKDNKLWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNNIWIGTWGGGINF 337 (781)
T ss_dssp CCEEEEEECTTSEEEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCCEEEEEBSSCEEE
T ss_pred ceEEEEEECCCCCEEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCCEEEEecCCeEEE
Confidence 3455677888999999996 89999998 555432111 11 0 01345678899999999999 899999
Q ss_pred EECCCCccccceeEEEecC--CCCCCCCCCeeEEEEEEcCCeEEEEEcCCeEEEEeCC-CcEEEEECCcccccccccccc
Q 006913 102 VDLLKIGTSESATQVFYGT--GSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTH-GQLLWSAGPVLDQLGYRQGCT 178 (626)
Q Consensus 102 id~~~~~~~~~~~~~~~~~--~~~~~~~~~~I~s~~~d~dG~LwIgT~~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~ 178 (626)
+++.+..+ ..+.... ..........|..++.+.+|+||+||.++||+++++. +...+.. . .
T Consensus 338 ~~~~~~~~----~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~-~-----------~ 401 (781)
T 3v9f_A 338 ISNAPPTF----HTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFENGKRVAIYNK-E-----------N 401 (781)
T ss_dssp ECSSCCSC----EEEC----CCCSSCCSSSCEEEEEECTTSCEEEEEBSSCEEEEETTEEEEECC---------------
T ss_pred eCCCCCcc----eeeccCccccccCCCCCcceEEEEEcCCCCEEEEeCCCcEEEEECCCCeEEEcc-C-----------C
Confidence 99887542 1111110 0012223456788888999999999998999999986 3332110 0 0
Q ss_pred cCCCCCccccceEEEcCCCeEEEEcCCCeEEEEeCCCCeEEEEEcCC-CCCcceeeeeecCCeEEEEEcCCCEEEEEECC
Q 006913 179 KTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLS-SFDKAFTLTPGNNGYLYVTIPVRALVLALDTS 257 (626)
Q Consensus 179 ~~l~~~~i~sspviD~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~-s~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~ 257 (626)
..+.... ..+++.|. +|+||+|+..+||++++++++++..+.... ....+.++++|.+|+||||+. ++++.+|+.
T Consensus 402 ~~~~~~~-v~~i~~d~-~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~--~Gl~~~~~~ 477 (781)
T 3v9f_A 402 RELLSNS-VLCSLKDS-EGNLWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTH--AGVFVIDLA 477 (781)
T ss_dssp --CCCSB-EEEEEECT-TSCEEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEET--TEEEEEESS
T ss_pred CCCCCcc-eEEEEECC-CCCEEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEEC--CceEEEeCC
Confidence 0111112 35567785 899999999889999999988776553211 234578899999999999995 578899988
Q ss_pred CCcEEEEEecC--C-CCCceeeEEEeeCCeEEEEEcCCeEEEEcCCCCEEEEeeccCCCCccccCceEEEEEEecCCcEE
Q 006913 258 SGNILWHKSVG--P-LGSAEYAPVVDSNGWISVGSLDGLLYSFSPSGVLNKFSKSDTSDSVIQSSPYWFHLLGPSIGLKA 334 (626)
Q Consensus 258 tG~~~w~~~~~--~-l~~~~sspvvD~dG~IWVGT~~gGLy~~d~~g~~~~~~~~~~~~~~ilssp~V~~Il~DsdG~Iw 334 (626)
++++....... . ....+.++.+|++|+||+||.++||+++++.+........ ... ++.+.|.+|++|.+|+||
T Consensus 478 ~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~--~~~--l~~~~i~~i~~d~~g~lW 553 (781)
T 3v9f_A 478 SKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQLVRKFNQ--YEG--FCSNTINQIYRSSKGQMW 553 (781)
T ss_dssp SSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCCEEEEECT--TTT--CSCSCEEEEEECTTSCEE
T ss_pred CCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCeEEEccC--CCC--CCCCeeEEEEECCCCCEE
Confidence 88765443222 1 1234567889999999999988899999987543333221 223 567889999999999999
Q ss_pred EEEeeecCee-EEec-ccCCcceeeecCceee
Q 006913 335 ILCLMVVGQF-SSLL-SKSDLQHFVLDESLVL 364 (626)
Q Consensus 335 I~T~t~~Ggl-~~~~-~~~d~~~f~~d~gli~ 364 (626)
++|. +|+ ..+. ....+.+|...+|++.
T Consensus 554 i~T~---~Glv~~~d~~~~~~~~~~~~~gl~~ 582 (781)
T 3v9f_A 554 LATG---EGLVCFPSARNFDYQVFQRKEGLPN 582 (781)
T ss_dssp EEET---TEEEEESCTTTCCCEEECGGGTCSC
T ss_pred EEEC---CCceEEECCCCCcEEEccccCCCCC
Confidence 8875 344 5543 3445888887777643
No 3
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.92 E-value=4.8e-24 Score=219.35 Aligned_cols=261 Identities=22% Similarity=0.329 Sum_probs=191.9
Q ss_pred CceeeeeEEeeCCEEEEEeCCcEEEEcCCCCEEEEEeCCCCCCcccCeEEecCCeEEEEE-CCeEEEEECCCCcccccee
Q 006913 36 AFRLSKPLIGEDGKIYACSEKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVA-ENRVLKVDLLKIGTSESAT 114 (626)
Q Consensus 36 ~~~~Sspvid~dG~IwIgSdggL~a~d~~G~~~W~~~~~~~~~i~~sp~iD~dG~IwVgT-~ggL~~id~~~~~~~~~~~ 114 (626)
....++|+++.+|.||+++.+ |+++|.+|+..|.+.... .....+.++ +|+||+++ +++|+++|+. +. .
T Consensus 59 ~~~~~~~~~~~~g~l~v~t~~-l~~~d~~g~~~~~~~~~~--~~~~~~~~~-~~~l~v~t~~~~l~~~d~~-g~-----~ 128 (330)
T 3hxj_A 59 EIIECRPSIGKDGTIYFGSDK-VYAINPDGTEKWRFDTKK--AIVSDFTIF-EDILYVTSMDGHLYAINTD-GT-----E 128 (330)
T ss_dssp GEEEECCEETTTTEECCSSCE-EEEECCCGGGGGGSCC-------CCEEEE-TTEEEEECTTSEEEEECTT-SC-----E
T ss_pred CCcccceEEecCCcEEEecCc-EEEECCCCcEEEEEECCC--CcccCceEE-CCEEEEEecCCEEEEEcCC-CC-----E
Confidence 456688999889999999977 999998888777655432 234456665 89999999 7899999988 43 3
Q ss_pred EEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEcCCeEEEEeCCCcEEEEECCcccccccccccccCCCCCccccceEEEc
Q 006913 115 QVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQ 194 (626)
Q Consensus 115 ~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~~gGL~a~d~~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~ 194 (626)
.|.+... ...+..+..+.+|+||+++.+++|+++|++|+..|.+.. . .....++++|.
T Consensus 129 ~~~~~~~------~~~~~~~~~~~~g~l~vgt~~~~l~~~d~~g~~~~~~~~-----~-----------~~~~~~~~~d~ 186 (330)
T 3hxj_A 129 KWRFKTK------KAIYATPIVSEDGTIYVGSNDNYLYAINPDGTEKWRFKT-----N-----------DAITSAASIGK 186 (330)
T ss_dssp EEEEECS------SCCCSCCEECTTSCEEEECTTSEEEEECTTSCEEEEEEC-----S-----------SCCCSCCEECT
T ss_pred EEEEcCC------CceeeeeEEcCCCEEEEEcCCCEEEEECCCCCEeEEEec-----C-----------CCceeeeEEcC
Confidence 4544321 123344566779999999988999999988989897511 0 11235678885
Q ss_pred CCCeEEEEcCCCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCCeEEEEEcCCCEEEEEECCCCcEEEEEecCCCCCce
Q 006913 195 CEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAE 274 (626)
Q Consensus 195 ~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~~~ 274 (626)
+|.||+++ ++|+++| .+++..|...... ..+.+++.+.+|+||+++. ++.++++| .+|...|.+.... ...
T Consensus 187 -~g~l~v~t--~~l~~~d-~~g~~~~~~~~~~-~~~~~~~~~~~g~l~v~t~-~~gl~~~~-~~g~~~~~~~~~~--~~~ 257 (330)
T 3hxj_A 187 -DGTIYFGS--DKVYAIN-PDGTEKWNFYAGY-WTVTRPAISEDGTIYVTSL-DGHLYAIN-PDGTEKWRFKTGK--RIE 257 (330)
T ss_dssp -TCCEEEES--SSEEEEC-TTSCEEEEECCSS-CCCSCCEECTTSCEEEEET-TTEEEEEC-TTSCEEEEEECSS--CCC
T ss_pred -CCEEEEEe--CEEEEEC-CCCcEEEEEccCC-cceeceEECCCCeEEEEcC-CCeEEEEC-CCCCEeEEeeCCC--Ccc
Confidence 89999999 7899999 6668889866432 3356678888999999995 57899998 5788888876542 234
Q ss_pred eeEEEeeCCeEEEEEcCCeEEEEcCCCCEEEEeeccCCCCccccCceEEEEEEecCCcEEEEEeeecCeeEEe
Q 006913 275 YAPVVDSNGWISVGSLDGLLYSFSPSGVLNKFSKSDTSDSVIQSSPYWFHLLGPSIGLKAILCLMVVGQFSSL 347 (626)
Q Consensus 275 sspvvD~dG~IWVGT~~gGLy~~d~~g~~~~~~~~~~~~~~ilssp~V~~Il~DsdG~IwI~T~t~~Ggl~~~ 347 (626)
.+++++.+|+||+||.+++|+++|++|+..|.... +.+.+.+++.|.+|+||+++. .|.+...
T Consensus 258 ~~~~~~~~g~l~v~t~~ggl~~~d~~g~~~~~~~~--------~~~~~~~~~~d~~g~l~~gt~--~G~~~~~ 320 (330)
T 3hxj_A 258 SSPVIGNTDTIYFGSYDGHLYAINPDGTEKWNFET--------GSWIIATPVIDENGTIYFGTR--NGKFYAL 320 (330)
T ss_dssp SCCEECTTSCEEEECTTCEEEEECTTSCEEEEEEC--------SSCCCSCCEECTTCCEEEECT--TSCEEEE
T ss_pred ccceEcCCCeEEEecCCCCEEEECCCCcEEEEEEc--------CCccccceEEcCCCEEEEEcC--CCeEEEE
Confidence 55778889999999999999999998888886552 233344567889999998653 4666543
No 4
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.92 E-value=1.8e-22 Score=235.54 Aligned_cols=318 Identities=9% Similarity=0.082 Sum_probs=210.9
Q ss_pred ceeeeeEEeeCCEEEEEeCCcEEEEcC-CCCEEEEEeCCC-----CCCcccCeEEecCCeEEEEE-CCeEEEEECCCCcc
Q 006913 37 FRLSKPLIGEDGKIYACSEKTLFAFES-NGTIAWSLDLDF-----TCNIGTAPVHGGTGEVYIVA-ENRVLKVDLLKIGT 109 (626)
Q Consensus 37 ~~~Sspvid~dG~IwIgSdggL~a~d~-~G~~~W~~~~~~-----~~~i~~sp~iD~dG~IwVgT-~ggL~~id~~~~~~ 109 (626)
....+...|.+|.||+|+.+||+.++. ++.+........ ....+.++++|.+|+||+|| ++||+++++.+..+
T Consensus 263 ~~i~~i~~d~~g~lWigt~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~ 342 (795)
T 4a2l_A 263 NYIRSLAMDSQNRLWIGTFNDLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGTYFGGLNYYHPIRNRF 342 (795)
T ss_dssp SBEEEEEECTTSCEEEEESSCEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEEEESSSCEEEECGGGGSS
T ss_pred CeEEEEEEcCCCCEEEEeCChhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEEECCCCeEEeCCCcccc
Confidence 345567788899999999879999998 555543221110 01345678899999999999 68999999876532
Q ss_pred ccceeEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEcCCeEEEEeCC-CcEEEEECCccccccccccccc-CCCCCccc
Q 006913 110 SESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTK-TDVDCYFT 187 (626)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~-~l~~~~i~ 187 (626)
................|..+..|.+|+||+||.++||+++++. ++..... . ...... .+.... .
T Consensus 343 -----~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~-~-------~~~~~~~~l~~~~-v 408 (795)
T 4a2l_A 343 -----KNIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYT-L-------QEDESARGIGSNN-I 408 (795)
T ss_dssp -----EEECCCTTSSSCSCSSEEEEEECTTSCEEEEESSSCEEEECTTTCCEEEEC-C-------C------CCSCSC-E
T ss_pred -----eEEcCCCCCCCCCCCeeEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEe-c-------CCCCcccCCCCcc-E
Confidence 2221111112233456788888999999999998999999986 6554321 0 000000 111122 3
Q ss_pred cceEEEcCCCe-EEEEcCCCeEEEEeCCCCeEEEEEcCC---CCCcceeeeeecCCeEEEEEcCCCEEEEEECCCCcEEE
Q 006913 188 SVPVIDQCEGS-IYISNTQGELYSLSAHSPYFNWIQDLS---SFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILW 263 (626)
Q Consensus 188 sspviD~~dG~-LwIGT~~GgL~~ld~~tg~~~w~~~~~---s~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~tG~~~w 263 (626)
.+++.|. +|+ ||||+.++||+++|++++++..+.... ....+.+++.|.+|+||+|+. .+++.+|+.++.+..
T Consensus 409 ~~i~~d~-~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~--~Gl~~~~~~~~~~~~ 485 (795)
T 4a2l_A 409 KAVYVDE-KKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL--SALVRFNPEQRSFTT 485 (795)
T ss_dssp EEEEEET-TTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES--SCEEEEETTTTEEEE
T ss_pred EEEEEcC-CCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec--CceeEEeCCCCeEEE
Confidence 5677786 889 999999889999999998876554311 123578889999999999995 468889988886654
Q ss_pred EEec---CCC-CCceeeEEEeeCCeEEEEEcCCeEEEEcCCCCEEEEeeccCCCCccccCceEEEEEEecCCcEEEEEee
Q 006913 264 HKSV---GPL-GSAEYAPVVDSNGWISVGSLDGLLYSFSPSGVLNKFSKSDTSDSVIQSSPYWFHLLGPSIGLKAILCLM 339 (626)
Q Consensus 264 ~~~~---~~l-~~~~sspvvD~dG~IWVGT~~gGLy~~d~~g~~~~~~~~~~~~~~ilssp~V~~Il~DsdG~IwI~T~t 339 (626)
.... ..+ ...+.++.+|++|+||+||. +||+++++.+....+....... .++.+.|.+|++|.+|+||++|.
T Consensus 486 ~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~Gl~~~~~~~~~~~~~~~~~~~--~l~~~~i~~i~~d~~g~lWigT~- 561 (795)
T 4a2l_A 486 IEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-EGLSVFKQEGLDIQKASILPVS--NVTKLFTNCIYEASNGIIWVGTR- 561 (795)
T ss_dssp CCBCTTCCBCCCCCEEEEEECTTCCEEEEES-SCEEEEEEETTEEEECCCSCSC--GGGGSCEEEEEECTTSCEEEEES-
T ss_pred ccccccccccCCceEEEEEECCCCCEEEEeC-CceEEEeCCCCeEEEecCCCCC--CCCCCeeEEEEECCCCCEEEEeC-
Confidence 3221 011 12356688999999999998 8999999864433322110122 25677889999999999998875
Q ss_pred ecCeeEEec-ccCCcceeeecCcee----eeeec-cccceeeee
Q 006913 340 VVGQFSSLL-SKSDLQHFVLDESLV----LAFLT-ASNQKLVAS 377 (626)
Q Consensus 340 ~~Ggl~~~~-~~~d~~~f~~d~gli----~~~~~-a~~~~~~~~ 377 (626)
+|+..+. ....+.+|...+|++ .++.. ..+...+++
T Consensus 562 --~Gl~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lWi~t 603 (795)
T 4a2l_A 562 --EGFYCFNEKDKQIKRYNTTNGLPNNVVYGILEDSFGRLWLST 603 (795)
T ss_dssp --SCEEEEETTTTEEEEECGGGTCSCSCEEEEEECTTSCEEEEE
T ss_pred --CCceeECCCCCcEEEeCCCCCCchhheEEEEECCCCCEEEEc
Confidence 2555443 344577887766663 33322 235555555
No 5
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.91 E-value=2.6e-21 Score=225.80 Aligned_cols=286 Identities=14% Similarity=0.082 Sum_probs=195.1
Q ss_pred eeeeeEEeeCCEEEEEe-CCcEEEEcC-CCCEEEEEeCCC------CCCcccCeEEecCCeEEEEECCeEEEEECCCCcc
Q 006913 38 RLSKPLIGEDGKIYACS-EKTLFAFES-NGTIAWSLDLDF------TCNIGTAPVHGGTGEVYIVAENRVLKVDLLKIGT 109 (626)
Q Consensus 38 ~~Sspvid~dG~IwIgS-dggL~a~d~-~G~~~W~~~~~~------~~~i~~sp~iD~dG~IwVgT~ggL~~id~~~~~~ 109 (626)
...+.++|.+|.||+|+ .+||+++|. ++++.. +.... ....+.+++.|.+|+||+||.+||+++++.++.+
T Consensus 216 ~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~Gl~~~~~~~~~~ 294 (795)
T 4a2l_A 216 QIQAILQQSPTRIWVATEGAGLFLINPKTKEIKN-YLHSPSNPKSISSNYIRSLAMDSQNRLWIGTFNDLNIYHEGTDSF 294 (795)
T ss_dssp CEEEEEEEETTEEEEEEBSSCEEEEETTTTEEEE-ECCCTTCTTSCSCSBEEEEEECTTSCEEEEESSCEEEEETTTTEE
T ss_pred eeEEEEEcCCCCEEEEECCCCeEEEeCCCCeEEE-eecCCCCccccCCCeEEEEEEcCCCCEEEEeCChhheEcCCCCeE
Confidence 34566788899999999 569999998 555432 22211 0133567788999999999977999999887632
Q ss_pred ccceeEEEec-CCCCCCCCCCeeEEEEEEcCCeEEEEEcCCeEEEEeCC-CcEEEEECCcccccccccccccCCCCCccc
Q 006913 110 SESATQVFYG-TGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFT 187 (626)
Q Consensus 110 ~~~~~~~~~~-~~~~~~~~~~~I~s~~~d~dG~LwIgT~~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~ 187 (626)
..... ...........|..+..|.+|+||+||.++||+.+++. +.+.... . .. ....+... ..
T Consensus 295 -----~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~-~----~~----~~~~l~~~-~V 359 (795)
T 4a2l_A 295 -----ASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGTYFGGLNYYHPIRNRFKNIR-N----IP----YKNSLSDN-VV 359 (795)
T ss_dssp -----EEECCCTTSTTSCSSSCEEEEEECTTSCEEEEESSSCEEEECGGGGSSEEEC-C----CT----TSSSCSCS-SE
T ss_pred -----EEEecCCCCCCCCCCCcEEEEEEeCCcCEEEEECCCCeEEeCCCcccceEEc-C----CC----CCCCCCCC-ee
Confidence 22111 11112233456888899999999999999999999975 5443321 1 00 01122222 23
Q ss_pred cceEEEcCCCeEEEEcCCCeEEEEeCCCCeEEEEEcCC-------CCCcceeeeeecCCe-EEEEEcCCCEEEEEECCCC
Q 006913 188 SVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLS-------SFDKAFTLTPGNNGY-LYVTIPVRALVLALDTSSG 259 (626)
Q Consensus 188 sspviD~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~-------s~~~v~sI~~D~dG~-LwVGT~~gG~l~alD~~tG 259 (626)
.+++.|+ +|+|||||.++||++++++++++..+.... ....+.+++.|.+|+ ||||+. +++++.+|+.++
T Consensus 360 ~~i~~d~-~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~-~~Gl~~~d~~~~ 437 (795)
T 4a2l_A 360 SCIVEDK-DKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTH-AGGLSILHRNSG 437 (795)
T ss_dssp EEEEECT-TSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEET-TTEEEEEETTTC
T ss_pred EEEEECC-CCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeC-cCceeEEeCCCC
Confidence 5677786 999999999989999999998887764221 124578899999999 999995 468999998888
Q ss_pred cEEEEEecC-CC-CCceeeEEEeeCCeEEEEEcCCeEEEEcCCCC-EEEEeeccCCCCccccCceEEEEEEecCCcEEEE
Q 006913 260 NILWHKSVG-PL-GSAEYAPVVDSNGWISVGSLDGLLYSFSPSGV-LNKFSKSDTSDSVIQSSPYWFHLLGPSIGLKAIL 336 (626)
Q Consensus 260 ~~~w~~~~~-~l-~~~~sspvvD~dG~IWVGT~~gGLy~~d~~g~-~~~~~~~~~~~~~ilssp~V~~Il~DsdG~IwI~ 336 (626)
++....... .+ ...+.++.+|++|+||+||. +||+++++... ...+... .+...+..+.|++|++|++|+||++
T Consensus 438 ~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~i~~d~~g~lWig 514 (795)
T 4a2l_A 438 QVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-SALVRFNPEQRSFTTIEKE--KDGTPVVSKQITTLFRDSHKRLWIG 514 (795)
T ss_dssp CEEEECTTTSCCSCSCEEEEEECSSSCEEEEES-SCEEEEETTTTEEEECCBC--TTCCBCCCCCEEEEEECTTCCEEEE
T ss_pred cEEEeecCCCCcCCCeeEEEEECCCCCEEEEec-CceeEEeCCCCeEEEcccc--ccccccCCceEEEEEECCCCCEEEE
Confidence 765432211 11 23456788899999999997 79999998644 3333221 1111245567899999999999998
Q ss_pred EeeecCeeEEe
Q 006913 337 CLMVVGQFSSL 347 (626)
Q Consensus 337 T~t~~Ggl~~~ 347 (626)
|. +|+..+
T Consensus 515 t~---~Gl~~~ 522 (795)
T 4a2l_A 515 GE---EGLSVF 522 (795)
T ss_dssp ES---SCEEEE
T ss_pred eC---CceEEE
Confidence 75 455444
No 6
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.90 E-value=1e-20 Score=220.28 Aligned_cols=299 Identities=8% Similarity=0.016 Sum_probs=194.0
Q ss_pred ceeeeeEEeeCCEEEEEeCCcEEEEcCCCCEEEEEeCCCC--------CCcccCeEEecCCe-EEEEECC-eEEEEECCC
Q 006913 37 FRLSKPLIGEDGKIYACSEKTLFAFESNGTIAWSLDLDFT--------CNIGTAPVHGGTGE-VYIVAEN-RVLKVDLLK 106 (626)
Q Consensus 37 ~~~Sspvid~dG~IwIgSdggL~a~d~~G~~~W~~~~~~~--------~~i~~sp~iD~dG~-IwVgT~g-gL~~id~~~ 106 (626)
....+.+.|.+|.||+||.+||.+||... +. .+..... .+.+.++++|.+|+ |||||.+ ||+++|+.+
T Consensus 19 n~V~~I~qD~~G~lWigT~~GL~ryDG~~-f~-~~~~~~~~~~~~~l~~n~I~~i~~d~~g~~lWigt~~~Gl~~~d~~~ 96 (781)
T 3v9f_A 19 NYVLSITQDKQGFLWFATEEGLNKFDGTR-FI-TYYKEEQSSSVQSITGNELNEVYTDPVQPVIWIATQRAGLNAYNYET 96 (781)
T ss_dssp SBEEEEEECTTSCEEEEESSCEEEECSSS-EE-EECCCSSCSSSCCCSCSCEEEEEECSSSSEEEEEESSSCEEEEETTT
T ss_pred CEeEEEEECCCCCEEEccCCcCccccCCc-eE-EEEcCCCCCccccccccccceEEEcCCCCEEEEEeCCCCcceECCCC
Confidence 45667889999999999999999998642 32 2222111 12355778899999 9999965 999999987
Q ss_pred CccccceeEEEecCCCCCCCCCCeeEEEEEEc--CCeEEEEEcCCeEEEEeCC-CcEEEEECCcccccccccccccCCCC
Q 006913 107 IGTSESATQVFYGTGSGKGGTGAIAGIAVSTS--SSSVYINVKGRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVD 183 (626)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~--dG~LwIgT~~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~ 183 (626)
..+ ..+..............|..+..+. +|.||+++..+||+++++. +++. .+.. .. ...+..
T Consensus 97 ~~f----~~~~~~~~~~~~l~~~~i~~i~~d~~~~g~lwi~t~~~gl~~~~~~~~~~~-~~~~-------~~--~~~l~~ 162 (781)
T 3v9f_A 97 QSF----SVYQYNPEDPQSLITNDVTHITSSVQAGKGLWVCTYYRGIEYLDIATGKFT-HYNK-------ST--VPALPS 162 (781)
T ss_dssp TEE----EEECCCTTCSSSCSCSCEEEEEECSSTTSEEEEEESSSCEEEEETTTTEEE-EEST-------TT--CTTCSC
T ss_pred CeE----EeeccccCCCCCcccCcceEEEecCccCCCEEEEECCCCeeEEECCCCeEE-eecc-------Cc--ccCCCc
Confidence 642 1111111111112223566777888 8999999977899999986 5442 2211 00 000111
Q ss_pred CccccceEEEcCCCeEEEEcCCCeEEEEeCCCCeEEEEEcCC------CCCcceeeeeecCCeEEEEEcCCCEEEEEECC
Q 006913 184 CYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLS------SFDKAFTLTPGNNGYLYVTIPVRALVLALDTS 257 (626)
Q Consensus 184 ~~i~sspviD~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~------s~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~ 257 (626)
.. ..+++.|. +|.||||+.++||+++|++++++..+.... ....+.+++.|.+|+|||||. + +++.+|+.
T Consensus 163 ~~-i~~i~~d~-~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lwigt~-~-Gl~~~d~~ 238 (781)
T 3v9f_A 163 EQ-TWTATEAE-DGKLYIGHVEGGLSILSLNDKSVKHFVHDPQNPNSLPGNDVRCIYKDTNGNIWIGTS-K-GLALFNAN 238 (781)
T ss_dssp CC-EEEEEEEE-TTEEEEEETTTEEEEEETTTTEEEEECC--------CCSSEEEEEECTTCCEEEEET-T-EEEEEETT
T ss_pred cc-eEEEEECC-CCCEEEEecCCCeEEEcCCCCceEeeecCCCCcccCCCCceeEEEEcCCCCEEEEeC-C-cHheECCC
Confidence 11 24567786 899999998878999999998776543211 123577889999999999995 4 78899988
Q ss_pred CCcEEEEEecC----CC-CCceeeEEEeeCCeEEEEEcCCeEEEEcCCCC-EEEEee------ccCCCCccccCceEEEE
Q 006913 258 SGNILWHKSVG----PL-GSAEYAPVVDSNGWISVGSLDGLLYSFSPSGV-LNKFSK------SDTSDSVIQSSPYWFHL 325 (626)
Q Consensus 258 tG~~~w~~~~~----~l-~~~~sspvvD~dG~IWVGT~~gGLy~~d~~g~-~~~~~~------~~~~~~~ilssp~V~~I 325 (626)
++.+....... .+ ...+.++++|.+|.|||||..+||+++++... +..+.. ....+...++.+.|++|
T Consensus 239 ~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i 318 (781)
T 3v9f_A 239 TETFTNFHNNPGNIHGALSSYIFSIKQLKDNKLWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYI 318 (781)
T ss_dssp TTEEEC-----------CCCCEEEEEECTTSEEEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEE
T ss_pred CCcEEEEEcCCCccccccCceEEEEEECCCCCEEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEE
Confidence 77665322110 11 23466788999999999998889999998643 332221 01111113677889999
Q ss_pred EEecCCcEEEEEeeecCeeEEecc-cCCcceee
Q 006913 326 LGPSIGLKAILCLMVVGQFSSLLS-KSDLQHFV 357 (626)
Q Consensus 326 l~DsdG~IwI~T~t~~Ggl~~~~~-~~d~~~f~ 357 (626)
++|.+|+|||+| +.+|+..+.. ...+.+|.
T Consensus 319 ~~D~~g~lWigt--~~~Gl~~~~~~~~~~~~~~ 349 (781)
T 3v9f_A 319 FQDSFNNIWIGT--WGGGINFISNAPPTFHTWS 349 (781)
T ss_dssp EECSSCCEEEEE--BSSCEEEECSSCCSCEEEC
T ss_pred EEeCCCCEEEEe--cCCeEEEeCCCCCcceeec
Confidence 999999999876 3467765533 33466664
No 7
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=99.87 E-value=3.6e-20 Score=214.99 Aligned_cols=293 Identities=11% Similarity=0.082 Sum_probs=186.4
Q ss_pred eeeeEEeeC-CEEEEEeCCcEEEEcC-CCCEEEEEeCCCCCCcccCeEEecCCeEEEEECCeEEEEECCCCccccceeEE
Q 006913 39 LSKPLIGED-GKIYACSEKTLFAFES-NGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAENRVLKVDLLKIGTSESATQV 116 (626)
Q Consensus 39 ~Sspvid~d-G~IwIgSdggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~dG~IwVgT~ggL~~id~~~~~~~~~~~~~ 116 (626)
..+.++|.+ +.||||+++||+++++ ++++.....+. ...+.++++|.+|+||+||++||+++++.+..+ ..+
T Consensus 193 i~~i~~d~~~~~lWigt~~Gl~~~~~~~~~~~~~~~l~--~~~i~~i~~d~~g~lWigT~~Gl~~~~~~~~~~----~~~ 266 (758)
T 3ott_A 193 VNSLLEDTTRQCVWIGTEGYLFQYFPSTGQIKQTEAFH--NNSIKSLALDGNGDLLAGTDNGLYVYHNDTTPL----QHI 266 (758)
T ss_dssp EEEEEEETTTTEEEEEEEEEEEEEETTTTEEEEEEEEE--EEEEEEEEECTTCCEEEEETTEEEEECCTTSCC----EEE
T ss_pred eEEEEEECCCCEEEEEECCCCeEEcCCCCeEEeccCCC--CCeEEEEEEcCCCCEEEEeCCceeEEecCCCcE----EEE
Confidence 445677765 4699999889999998 55543211111 123567888999999999988999999877532 111
Q ss_pred EecCCCCCCCCCCeeEEEEEEcCCeEEEEEcCCeEEEEeCCCcEEEEECCcccccccccccccCCCCCccccceEEEcCC
Q 006913 117 FYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCE 196 (626)
Q Consensus 117 ~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~~gGL~a~d~~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~d 196 (626)
..............|..+..|.+|+||+||.. ||..+..+....... . ... ...... ....+++.|+ +
T Consensus 267 ~~~~~~~~~l~~~~i~~i~~D~~g~lWiGT~~-Gl~~~~~~~~~~~~~-~--~~~------~~~~~~-~~v~~i~~D~-~ 334 (758)
T 3ott_A 267 IHDSRNIQSLTNNIIWNIFADQEHNIWLGTDY-GISLSRYNSALQFIP-I--SQI------TGTGDG-NQFYSLFRDS-K 334 (758)
T ss_dssp CCCTTCTTSCSCSCEEEEEECTTCCEEEEESS-SEEEECCCC-CEEEE-H--HHH------SCSCCC-CBEEEEEECT-T
T ss_pred EcCCCCcCcCCcCeEEEEEEcCCCCEEEEeCC-cccccccCCceeEEe-c--ccC------CCCCCC-ceEEEEEEcC-C
Confidence 11111112234456788889999999999975 777664443332221 0 000 001111 1235567786 9
Q ss_pred CeEEEEcCCCeEEEEeCCCC---eEEEEEcCC-----CCCcceeeeeecCCeEEEEEcCCCEEEEEECCCCcEEEEEecC
Q 006913 197 GSIYISNTQGELYSLSAHSP---YFNWIQDLS-----SFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVG 268 (626)
Q Consensus 197 G~LwIGT~~GgL~~ld~~tg---~~~w~~~~~-----s~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~ 268 (626)
|+||||+. +||++++..++ .+.|+.... ....+.++++|.+|+||||| . ++++.+|+.++++.......
T Consensus 335 g~lWiGt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt-~-~GL~~~~~~~~~~~~~~~~~ 411 (758)
T 3ott_A 335 GFYWFGGA-NGLIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYEDKEQQLWIAT-D-GSINRYDYATRQFIHYNIVD 411 (758)
T ss_dssp CCEEEEET-TEEEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEECTTSCEEEEE-T-TEEEEEETTTTEEEEEEEEC
T ss_pred CCEEEeeC-CcceeecccccccceeEEeccCCcCCCCCCCceEEEEECCCCCEEEEe-C-CcHhhcCcCCCcEEEeecCC
Confidence 99999995 58999988764 455654211 12357889999999999999 4 48999999888775432111
Q ss_pred C----CCCceeeEEEeeCCeEEEEEcCCeEEEEcCCC------C-EE--EEeeccCCCCccccCceEEEEEEecCCcEEE
Q 006913 269 P----LGSAEYAPVVDSNGWISVGSLDGLLYSFSPSG------V-LN--KFSKSDTSDSVIQSSPYWFHLLGPSIGLKAI 335 (626)
Q Consensus 269 ~----l~~~~sspvvD~dG~IWVGT~~gGLy~~d~~g------~-~~--~~~~~~~~~~~ilssp~V~~Il~DsdG~IwI 335 (626)
. ....+.++++|++|+|||||.++||+++++.. . .. ..+. ...+ ++.+.|++|++|.+|+||+
T Consensus 412 ~~~~~~~~~v~~i~~d~~g~lWigT~~~Gl~~~~~~~~~~~~~~~~~~~~~~~--~~~~--l~~~~i~~i~~d~~g~lWi 487 (758)
T 3ott_A 412 NTGTYNTNWTYYIFEDTAGQLWISTCLGGIFVVDKHKLMQSTSGQYIAEQNYS--VHNG--LSGMFINQIIPDNEGNVWV 487 (758)
T ss_dssp CC--CBSSSEEEEEECTTSEEEEEESSSCEEEEEHHHHHHCCSSEEECSEEEC--GGGT--CSCSCEEEEEECTTSCEEE
T ss_pred CcCCCCCceEEEEEEcCCCCEEEEECCCceEEEccccccccCCcceecccccc--cccc--cccceeeeEEEcCCCCEEE
Confidence 1 01235668899999999999989999998642 2 11 1111 1122 4567789999999999998
Q ss_pred EEeeecCeeEEe-cccCCcceee
Q 006913 336 LCLMVVGQFSSL-LSKSDLQHFV 357 (626)
Q Consensus 336 ~T~t~~Ggl~~~-~~~~d~~~f~ 357 (626)
+.++. +|+..+ .....+.++.
T Consensus 488 ~~~t~-~Gl~~~d~~~~~~~~~~ 509 (758)
T 3ott_A 488 LLYNN-KGIDKINPRTREVTKLF 509 (758)
T ss_dssp EETTC-SSEEEEETTTTEEEEEC
T ss_pred EccCC-CCcEEEeCCCCceEEec
Confidence 33343 445444 3333455553
No 8
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=99.85 E-value=3.8e-19 Score=206.43 Aligned_cols=268 Identities=13% Similarity=0.081 Sum_probs=177.4
Q ss_pred CceeeeeEEeeCCEEEEEeCCcEEEEcCCCCEEEEEeCCC--CCCcccCeEEecCCeEEEEECCeEEEEECCCCccccce
Q 006913 36 AFRLSKPLIGEDGKIYACSEKTLFAFESNGTIAWSLDLDF--TCNIGTAPVHGGTGEVYIVAENRVLKVDLLKIGTSESA 113 (626)
Q Consensus 36 ~~~~Sspvid~dG~IwIgSdggL~a~d~~G~~~W~~~~~~--~~~i~~sp~iD~dG~IwVgT~ggL~~id~~~~~~~~~~ 113 (626)
.....+.+.|.+|.||+||.+||.+||... +. .+.... ....+.+++.|.+|.|||||.+||+++|+.+..+
T Consensus 21 ~n~V~~I~qD~~G~lWigT~~GL~ryDG~~-~~-~~~~~~~~~~~~i~~i~~d~~g~lWigT~~Gl~~yd~~~~~f---- 94 (758)
T 3ott_A 21 ASVVSCFLQDSEGLIWIGSNKGLFSYDGYS-TQ-QHFTYGENNNTRIYCGVIIDNTYLYMGTDNGILVYNYRADRY---- 94 (758)
T ss_dssp CCCEEEEEECTTSCEEEEESSCEEEECSSC-EE-ECSCTTSTTSSCEEEEEEETTTEEEEEETTEEEEEETTTTEE----
T ss_pred cceEEEEEECCCCCEEEEECCCccccCCCc-eE-EEEccCCCCCceEEEEEEcCCCcEEEEeCCCeEEEeCCCCEE----
Confidence 345677889999999999999999998522 21 121111 1123556788999999999999999999987532
Q ss_pred eEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEcCCeEEEEeCC-CcEEEEECCcccccccccccccCCCCCccccceEE
Q 006913 114 TQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVI 192 (626)
Q Consensus 114 ~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspvi 192 (626)
.. .. . .....|..+ .+.+|.||++|.+ ||+++++. +++. .+.. . ...+... ...+++.
T Consensus 95 ---~~-~~--~-~~~~~i~~i-~~~~g~lWigt~~-Gl~~~~~~~~~~~-~~~~-------~---~~~l~~~-~i~~i~~ 153 (758)
T 3ott_A 95 ---EQ-PE--T-DFPTDVRTM-ALQGDTLWLGALN-GLYTYQLQSRKLT-SFDT-------R---RNGLPNN-TIYSIIR 153 (758)
T ss_dssp ---CC-CS--C-CCCSCEEEE-EEETTEEEEEETT-EEEEEETTTCCEE-EECH-------H---HHCCSCS-CEEEEEE
T ss_pred ---EC-cc--c-CCCceEEEE-EecCCcEEEEcCC-cceeEeCCCCeEE-Eecc-------C---CCCcCCC-eEEEEEE
Confidence 11 10 0 111234443 3468999999975 99999985 5443 2210 0 0011111 1245667
Q ss_pred EcCCCeEEEEcCCCeEEEEeCCCCeEEEEEcCCC----CCcceeeeeecCC-eEEEEEcCCCEEEEEECCCCcEEEEEec
Q 006913 193 DQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSS----FDKAFTLTPGNNG-YLYVTIPVRALVLALDTSSGNILWHKSV 267 (626)
Q Consensus 193 D~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s----~~~v~sI~~D~dG-~LwVGT~~gG~l~alD~~tG~~~w~~~~ 267 (626)
|. +|.||||+. +||+++++.++++........ ...+.+++.|.+| .|||||. ++++.+|+.++.+......
T Consensus 154 d~-~g~lWigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~--~Gl~~~~~~~~~~~~~~~l 229 (758)
T 3ott_A 154 TK-DNQIYVGTY-NGLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE--GYLFQYFPSTGQIKQTEAF 229 (758)
T ss_dssp CT-TCCEEEEET-TEEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE--EEEEEEETTTTEEEEEEEE
T ss_pred cC-CCCEEEEeC-CCHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC--CCCeEEcCCCCeEEeccCC
Confidence 85 899999996 579999998887765422111 1236778888765 6999994 4788899888765432222
Q ss_pred CCCCCceeeEEEeeCCeEEEEEcCCeEEEEcCCC-CEEEEeeccCCCCccccCceEEEEEEecCCcEEEEEe
Q 006913 268 GPLGSAEYAPVVDSNGWISVGSLDGLLYSFSPSG-VLNKFSKSDTSDSVIQSSPYWFHLLGPSIGLKAILCL 338 (626)
Q Consensus 268 ~~l~~~~sspvvD~dG~IWVGT~~gGLy~~d~~g-~~~~~~~~~~~~~~ilssp~V~~Il~DsdG~IwI~T~ 338 (626)
. ...+.++++|.+|.||||| .+||+++++.. ++..+... ..+...++.+.|++|++|.+|+|||+|.
T Consensus 230 ~--~~~i~~i~~d~~g~lWigT-~~Gl~~~~~~~~~~~~~~~~-~~~~~~l~~~~i~~i~~D~~g~lWiGT~ 297 (758)
T 3ott_A 230 H--NNSIKSLALDGNGDLLAGT-DNGLYVYHNDTTPLQHIIHD-SRNIQSLTNNIIWNIFADQEHNIWLGTD 297 (758)
T ss_dssp E--EEEEEEEEECTTCCEEEEE-TTEEEEECCTTSCCEEECCC-TTCTTSCSCSCEEEEEECTTCCEEEEES
T ss_pred C--CCeEEEEEEcCCCCEEEEe-CCceeEEecCCCcEEEEEcC-CCCcCcCCcCeEEEEEEcCCCCEEEEeC
Confidence 1 1235668889999999999 47999999864 44443321 1121236788899999999999999884
No 9
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.85 E-value=2.9e-18 Score=181.19 Aligned_cols=265 Identities=18% Similarity=0.213 Sum_probs=182.7
Q ss_pred eeeeEEeeCCEEEEEe-CCcEEEEcC-CCCEEEEEeCCCC--------CCcccCeEEecCCeEEEEE-CCeEEEEECCCC
Q 006913 39 LSKPLIGEDGKIYACS-EKTLFAFES-NGTIAWSLDLDFT--------CNIGTAPVHGGTGEVYIVA-ENRVLKVDLLKI 107 (626)
Q Consensus 39 ~Sspvid~dG~IwIgS-dggL~a~d~-~G~~~W~~~~~~~--------~~i~~sp~iD~dG~IwVgT-~ggL~~id~~~~ 107 (626)
.++|++ .+|.||+++ ++.|+++|. +|+.+|.+..... ......|.. .++.||+++ +++|+++|..++
T Consensus 46 ~~~p~v-~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~v~~~~g~l~a~d~~tG 123 (376)
T 3q7m_A 46 NLHPAL-ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTV-SGGHVYIGSEKAQVYALNTSDG 123 (376)
T ss_dssp CCCCEE-ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEE-ETTEEEEEETTSEEEEEETTTC
T ss_pred eeccEE-ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceE-eCCEEEEEcCCCEEEEEECCCC
Confidence 358988 688999998 568999998 8999999877421 112334554 578999999 688999999887
Q ss_pred ccccceeEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEcCCeEEEEeC-CCcEEEEECCcccccccccccccCCCCCcc
Q 006913 108 GTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMT-HGQLLWSAGPVLDQLGYRQGCTKTDVDCYF 186 (626)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~~gGL~a~d~-~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i 186 (626)
+ ..|.+.... .. ...+...++.||+++.+++|+++|+ +|+.+|.+.. . . .... ...
T Consensus 124 ~-----~~W~~~~~~------~~-~~~p~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~-----~--~---~~~~-~~~ 180 (376)
T 3q7m_A 124 T-----VAWQTKVAG------EA-LSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNL-----D--M---PSLS-LRG 180 (376)
T ss_dssp C-----EEEEEECSS------CC-CSCCEEETTEEEEECTTSEEEEEETTTCCEEEEEEC-----C--C---------CC
T ss_pred C-----EEEEEeCCC------ce-EcCCEEECCEEEEEcCCCeEEEEECCCCcEEEEEeC-----C--C---Ccee-ecC
Confidence 5 356543211 11 1122345889999998889999997 5999998621 0 0 0000 001
Q ss_pred ccceEEEcCCCeEEEEcCCCeEEEEeCCCCeEEEEEcCCCC----------CcceeeeeecCCeEEEEEcCCCEEEEEEC
Q 006913 187 TSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSSF----------DKAFTLTPGNNGYLYVTIPVRALVLALDT 256 (626)
Q Consensus 187 ~sspviD~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s~----------~~v~sI~~D~dG~LwVGT~~gG~l~alD~ 256 (626)
..+|+++ ++.||+++.++.|+++|+++|++.|....... +....+. ..++.+|+++. ++.++++|+
T Consensus 181 ~~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~v~~~~~-~g~l~~~d~ 256 (376)
T 3q7m_A 181 ESAPTTA--FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPV-VVNGVVFALAY-NGNLTALDL 256 (376)
T ss_dssp CCCCEEE--TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCE-EETTEEEEECT-TSCEEEEET
T ss_pred CCCcEEE--CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcE-EECCEEEEEec-CcEEEEEEC
Confidence 2457777 78999999999999999999999998764310 0111222 24789999985 578999999
Q ss_pred CCCcEEEEEecCCCCCceeeEEEeeCCeEEEEEcCCeEEEEcC-CCCEEEEeeccCCCCccccCceEEEEEEecCCcEEE
Q 006913 257 SSGNILWHKSVGPLGSAEYAPVVDSNGWISVGSLDGLLYSFSP-SGVLNKFSKSDTSDSVIQSSPYWFHLLGPSIGLKAI 335 (626)
Q Consensus 257 ~tG~~~w~~~~~~l~~~~sspvvD~dG~IWVGT~~gGLy~~d~-~g~~~~~~~~~~~~~~ilssp~V~~Il~DsdG~IwI 335 (626)
.+|+.+|....+. ...++.+ ++.||+++.+++|+++|+ +|+..|........ ....+.+ .+|.||+
T Consensus 257 ~tG~~~w~~~~~~----~~~~~~~-~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~--~~~~~~~------~~~~l~v 323 (376)
T 3q7m_A 257 RSGQIMWKRELGS----VNDFIVD-GNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHR--LLTSPVL------YNGNLVV 323 (376)
T ss_dssp TTCCEEEEECCCC----EEEEEEE-TTEEEEEETTCCEEEEETTTCCEEEEECTTTTS--CCCCCEE------ETTEEEE
T ss_pred CCCcEEeeccCCC----CCCceEE-CCEEEEEcCCCeEEEEECCCCcEEEeecccCCC--cccCCEE------ECCEEEE
Confidence 9999999876542 3456666 899999999999999997 58898876521111 1334432 3577776
Q ss_pred EEeeecCeeEEe
Q 006913 336 LCLMVVGQFSSL 347 (626)
Q Consensus 336 ~T~t~~Ggl~~~ 347 (626)
++ ..|.+..+
T Consensus 324 ~~--~~g~l~~~ 333 (376)
T 3q7m_A 324 GD--SEGYLHWI 333 (376)
T ss_dssp EC--TTSEEEEE
T ss_pred Ee--CCCeEEEE
Confidence 54 33555443
No 10
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.84 E-value=2.2e-18 Score=182.08 Aligned_cols=274 Identities=21% Similarity=0.272 Sum_probs=185.2
Q ss_pred ceeeeeEEeeCCEEEEEe-CCcEEEEcC-CCCEEEEEeCCCCCCcccCeEEecCCeEEEEE-CCeEEEEECCCCccccce
Q 006913 37 FRLSKPLIGEDGKIYACS-EKTLFAFES-NGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVA-ENRVLKVDLLKIGTSESA 113 (626)
Q Consensus 37 ~~~Sspvid~dG~IwIgS-dggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~dG~IwVgT-~ggL~~id~~~~~~~~~~ 113 (626)
.+.+.|++ .+|.||+++ ++.|+++|. +|+.+|.+.... .....|++ .++.+|+++ +++|+++|+.++.
T Consensus 94 ~~~~~~~~-~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~--~~~~~p~~-~~~~v~v~~~~g~l~~~d~~tG~----- 164 (376)
T 3q7m_A 94 LLSGGVTV-SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAG--EALSRPVV-SDGLVLIHTSNGQLQALNEADGA----- 164 (376)
T ss_dssp CEEEEEEE-ETTEEEEEETTSEEEEEETTTCCEEEEEECSS--CCCSCCEE-ETTEEEEECTTSEEEEEETTTCC-----
T ss_pred ccccCceE-eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCC--ceEcCCEE-ECCEEEEEcCCCeEEEEECCCCc-----
Confidence 45566776 688999998 568999998 899999987753 24456666 468999998 7889999998875
Q ss_pred eEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEcCCeEEEEeC-CCcEEEEECCcccccccccccccCCCCCccccceEE
Q 006913 114 TQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMT-HGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVI 192 (626)
Q Consensus 114 ~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~~gGL~a~d~-~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspvi 192 (626)
..|.+........ ..... .+...++.||+++.+++|+++|+ +|+.+|.... ....+......-..+...|++
T Consensus 165 ~~W~~~~~~~~~~-~~~~~-~~~~~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~-----~~~~~~~~~~~~~~~~~~p~~ 237 (376)
T 3q7m_A 165 VKWTVNLDMPSLS-LRGES-APTTAFGAAVVGGDNGRVSAVLMEQGQMIWQQRI-----SQATGSTEIDRLSDVDTTPVV 237 (376)
T ss_dssp EEEEEECCC------CCCC-CCEEETTEEEECCTTTEEEEEETTTCCEEEEEEC-----CC-----------CCCCCCEE
T ss_pred EEEEEeCCCCcee-ecCCC-CcEEECCEEEEEcCCCEEEEEECCCCcEEEEEec-----ccCCCCcccccccccCCCcEE
Confidence 3555433211000 00011 22334789999998889999998 5999998511 000000000000012355777
Q ss_pred EcCCCeEEEEcCCCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCCeEEEEEcCCCEEEEEECCCCcEEEEEecCCCCC
Q 006913 193 DQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGS 272 (626)
Q Consensus 193 D~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~ 272 (626)
+ ++.||+++.+++|+++|+++|++.|...... ...+..+ +++||+++. ++.++++|+.+|+.+|...... ..
T Consensus 238 ~--~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~~---~~~~~~~-~~~l~~~~~-~g~l~~~d~~tG~~~w~~~~~~-~~ 309 (376)
T 3q7m_A 238 V--NGVVFALAYNGNLTALDLRSGQIMWKRELGS---VNDFIVD-GNRIYLVDQ-NDRVMALTIDGGVTLWTQSDLL-HR 309 (376)
T ss_dssp E--TTEEEEECTTSCEEEEETTTCCEEEEECCCC---EEEEEEE-TTEEEEEET-TCCEEEEETTTCCEEEEECTTT-TS
T ss_pred E--CCEEEEEecCcEEEEEECCCCcEEeeccCCC---CCCceEE-CCEEEEEcC-CCeEEEEECCCCcEEEeecccC-CC
Confidence 6 7999999999999999999999999876433 2334444 789999995 5789999999999999876321 12
Q ss_pred ceeeEEEeeCCeEEEEEcCCeEEEEcC-CCCEEEEeeccCCCCccccCceEEEEEEecCCcEEEEEeeecCeeE
Q 006913 273 AEYAPVVDSNGWISVGSLDGLLYSFSP-SGVLNKFSKSDTSDSVIQSSPYWFHLLGPSIGLKAILCLMVVGQFS 345 (626)
Q Consensus 273 ~~sspvvD~dG~IWVGT~~gGLy~~d~-~g~~~~~~~~~~~~~~ilssp~V~~Il~DsdG~IwI~T~t~~Ggl~ 345 (626)
...+|++. ++.||+++.++.|+++|+ +|+..|..... ...+...|.+ .+|.||+++. .|.+.
T Consensus 310 ~~~~~~~~-~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~--~~~~~~~~~~------~~~~l~v~~~--~G~l~ 372 (376)
T 3q7m_A 310 LLTSPVLY-NGNLVVGDSEGYLHWINVEDGRFVAQQKVD--SSGFQTEPVA------ADGKLLIQAK--DGTVY 372 (376)
T ss_dssp CCCCCEEE-TTEEEEECTTSEEEEEETTTCCEEEEEECC--TTCBCSCCEE------ETTEEEEEBT--TSCEE
T ss_pred cccCCEEE-CCEEEEEeCCCeEEEEECCCCcEEEEEecC--CCcceeCCEE------ECCEEEEEeC--CCEEE
Confidence 34556665 799999999999999997 58998876531 1112334432 4788886543 35554
No 11
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.72 E-value=5.3e-14 Score=141.30 Aligned_cols=270 Identities=10% Similarity=0.074 Sum_probs=176.5
Q ss_pred ceeeeeEEeeCCEEEEEe--CCcEEEEcCCCCEEEEEeCCCCCCcccCeEEecCCeEEEEE--CCeEEEEECCCCccccc
Q 006913 37 FRLSKPLIGEDGKIYACS--EKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVA--ENRVLKVDLLKIGTSES 112 (626)
Q Consensus 37 ~~~Sspvid~dG~IwIgS--dggL~a~d~~G~~~W~~~~~~~~~i~~sp~iD~dG~IwVgT--~ggL~~id~~~~~~~~~ 112 (626)
.....+++|.+|+||+++ +++|+.+|.++.+.. +...........+.+|.+|++|+++ +++|+++++++. .
T Consensus 15 ~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~~~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~-~--- 89 (299)
T 2z2n_A 15 TGPYGITVSDKGKVWITQHKANMISCINLDGKITE-YPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKKGI-I--- 89 (299)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEE-EECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTSC-E---
T ss_pred CCccceEECCCCCEEEEecCCCcEEEEcCCCCeEE-ecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCCCc-E---
Confidence 455677888899999998 367999998766543 3222111234567788999999998 478999998742 1
Q ss_pred eeEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEc-CCeEEEEeCCCcEEEEECCcccccccccccccCCCCCccccceE
Q 006913 113 ATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVK-GRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPV 191 (626)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~-~gGL~a~d~~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspv 191 (626)
..+... .....+..+..+.+|+||+++. +++|+.++++|+......+ .. ......++
T Consensus 90 -~~~~~~------~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~------------~~---~~~~~~i~ 147 (299)
T 2z2n_A 90 -KEYTLP------NPDSAPYGITEGPNGDIWFTEMNGNRIGRITDDGKIREYELP------------NK---GSYPSFIT 147 (299)
T ss_dssp -EEEECS------STTCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEECS------------ST---TCCEEEEE
T ss_pred -EEEeCC------CcCCCceeeEECCCCCEEEEecCCceEEEECCCCCEEEecCC------------CC---CCCCceEE
Confidence 112111 0122345566678899999875 5789999997765432100 00 00123466
Q ss_pred EEcCCCeEEEEcC-CCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCCeEEEEEcCCCEEEEEECCCCcEEEEEecCCC
Q 006913 192 IDQCEGSIYISNT-QGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPL 270 (626)
Q Consensus 192 iD~~dG~LwIGT~-~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l 270 (626)
+|+ +|+||+++. .++|+++|+ ++++...........+..++.+.+|+||+++...+.++.+|+ ++.+.. ......
T Consensus 148 ~~~-~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~ 223 (299)
T 2z2n_A 148 LGS-DNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITE-FKIPTP 223 (299)
T ss_dssp ECT-TSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EECSST
T ss_pred EcC-CCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEE-EECCCC
Confidence 775 889999875 578999999 666654322122234567888989999999866678999998 787653 222211
Q ss_pred CCceeeEEEeeCCeEEEEEc-CCeEEEEcCCCCEEEEeeccCCCCccccCceEEEEEEecCCcEEEEEeeecCeeEEe
Q 006913 271 GSAEYAPVVDSNGWISVGSL-DGLLYSFSPSGVLNKFSKSDTSDSVIQSSPYWFHLLGPSIGLKAILCLMVVGQFSSL 347 (626)
Q Consensus 271 ~~~~sspvvD~dG~IWVGT~-~gGLy~~d~~g~~~~~~~~~~~~~~ilssp~V~~Il~DsdG~IwI~T~t~~Ggl~~~ 347 (626)
......+++|++|+||+++. +++|+++++++.+..+... . ....+..+.. .+|+||+++. .+++..+
T Consensus 224 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~---~----~~~~~~~i~~-~~g~l~v~~~--~~~l~~~ 291 (299)
T 2z2n_A 224 NARPHAITAGAGIDLWFTEWGANKIGRLTSNNIIEEYPIQ---I----KSAEPHGICF-DGETIWFAME--CDKIGKL 291 (299)
T ss_dssp TCCEEEEEECSTTCEEEEETTTTEEEEEETTTEEEEEECS---S----SSCCEEEEEE-CSSCEEEEET--TTEEEEE
T ss_pred CCCceeEEECCCCCEEEeccCCceEEEECCCCceEEEeCC---C----CCCccceEEe-cCCCEEEEec--CCcEEEE
Confidence 12355688898999999984 5799999997755433221 1 1233566777 8999998764 3566544
No 12
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.72 E-value=3.3e-14 Score=142.92 Aligned_cols=264 Identities=10% Similarity=0.078 Sum_probs=173.8
Q ss_pred ceeeeeEEeeCCEEEEEe--CCcEEEEcCCCCEEEEEeCCCCCCcccCeEEecCCeEEEEE--CCeEEEEECCCCccccc
Q 006913 37 FRLSKPLIGEDGKIYACS--EKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVA--ENRVLKVDLLKIGTSES 112 (626)
Q Consensus 37 ~~~Sspvid~dG~IwIgS--dggL~a~d~~G~~~W~~~~~~~~~i~~sp~iD~dG~IwVgT--~ggL~~id~~~~~~~~~ 112 (626)
.......+|.+|+||+++ +++|+.++.++++.. +..+........+.+|.+|++|+++ +++|+++|+. +..
T Consensus 20 ~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~--- 94 (300)
T 2qc5_A 20 SGPYGITSSEDGKVWFTQHKANKISSLDQSGRIKE-FEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGF--- 94 (300)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEE-EECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE---
T ss_pred CCcceeeECCCCCEEEEcCCCCeEEEECCCCceEE-EECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCe---
Confidence 344567888899999997 468999998766543 3332211234466788899999998 4789999988 421
Q ss_pred eeEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEc-CCeEEEEeCCCcEEEEECCcccccccccccccCCCCCccccceE
Q 006913 113 ATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVK-GRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPV 191 (626)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~-~gGL~a~d~~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspv 191 (626)
..+.... ....+..+..+.+|+||+++. +++|+.++++|+...... + .. ......++
T Consensus 95 -~~~~~~~------~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~------~------~~---~~~~~~i~ 152 (300)
T 2qc5_A 95 -TEYPLPQ------PDSGPYGITEGLNGDIWFTQLNGDRIGKLTADGTIYEYDL------P------NK---GSYPAFIT 152 (300)
T ss_dssp -EEEECSS------TTCCEEEEEECSTTCEEEEETTTTEEEEECTTSCEEEEEC------S------ST---TCCEEEEE
T ss_pred -EEecCCC------CCCCCccceECCCCCEEEEccCCCeEEEECCCCCEEEccC------C------CC---CCCceeEE
Confidence 1121110 112345566678899999986 578999998877653210 0 00 00123466
Q ss_pred EEcCCCeEEEEcC-CCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCCeEEEEEcCCCEEEEEECCCCcEEEEEecCCC
Q 006913 192 IDQCEGSIYISNT-QGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPL 270 (626)
Q Consensus 192 iD~~dG~LwIGT~-~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l 270 (626)
+|. +|+||+++. +++|++++. ++++...........+..++.|.+|+||+++..++.++.+++ +|..........
T Consensus 153 ~d~-~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~- 228 (300)
T 2qc5_A 153 LGS-DNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTP- 228 (300)
T ss_dssp ECT-TSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSST-
T ss_pred ECC-CCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCC-
Confidence 775 888999986 578999999 455543322122234567888989999999876678999997 676654322211
Q ss_pred CCceeeEEEeeCCeEEEEEcC-CeEEEEcCCCCEEEEeeccCCCCccccCceEEEEEEecCCcEEEEEe
Q 006913 271 GSAEYAPVVDSNGWISVGSLD-GLLYSFSPSGVLNKFSKSDTSDSVIQSSPYWFHLLGPSIGLKAILCL 338 (626)
Q Consensus 271 ~~~~sspvvD~dG~IWVGT~~-gGLy~~d~~g~~~~~~~~~~~~~~ilssp~V~~Il~DsdG~IwI~T~ 338 (626)
......+++|++|+||+++.. ++|++++++++...+... . ....+.+|..|.+|+||+++.
T Consensus 229 ~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~---~----~~~~~~~i~~~~~g~l~v~~~ 290 (300)
T 2qc5_A 229 NARPHAITAGKNSEIWFTEWGANQIGRITNDNTIQEYQLQ---T----ENAEPHGITFGKDGSVWFALK 290 (300)
T ss_dssp TCCEEEEEECSTTCEEEEETTTTEEEEECTTSCEEEEECC---S----TTCCCCCEEECTTSCEEEECS
T ss_pred CCCceEEEECCCCCEEEeccCCCeEEEECCCCcEEEEECC---c----cCCccceeEeCCCCCEEEEcc
Confidence 123456888989999999964 799999998766544221 1 112235688899999997653
No 13
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=99.58 E-value=2.7e-12 Score=145.68 Aligned_cols=179 Identities=18% Similarity=0.153 Sum_probs=110.9
Q ss_pred eeeeeEEeeCCEEEEEeC--CcEEEEcC--CCCEEEEEeCCCCC---------CcccCeEEe-cCCe----EEEEE-CCe
Q 006913 38 RLSKPLIGEDGKIYACSE--KTLFAFES--NGTIAWSLDLDFTC---------NIGTAPVHG-GTGE----VYIVA-ENR 98 (626)
Q Consensus 38 ~~Sspvid~dG~IwIgSd--ggL~a~d~--~G~~~W~~~~~~~~---------~i~~sp~iD-~dG~----IwVgT-~gg 98 (626)
..++|++ .+|.||+++. +.|+++|. +|+.+|++...... .....+.+. .++. ||+++ ++.
T Consensus 54 ~~~tP~v-~~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~ 132 (599)
T 1w6s_A 54 HEGAPLV-VDGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGN 132 (599)
T ss_dssp CCSCCEE-ETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSE
T ss_pred ceeccEE-ECCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCE
Confidence 4689999 6889999985 67999997 89999998764320 112345552 3566 99998 789
Q ss_pred EEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEc------CCeEEEEeCC-CcEEEEECCccccc
Q 006913 99 VLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVK------GRALFAFMTH-GQLLWSAGPVLDQL 171 (626)
Q Consensus 99 L~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~------~gGL~a~d~~-G~~~w~~~~~~~~~ 171 (626)
|+++|..+++. .|........ ....+...+...++.||+++. ++.|+++|.. |+++|.+.......
T Consensus 133 l~AlDa~TG~~-----~W~~~~~~~~--~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~ 205 (599)
T 1w6s_A 133 VAALNAETGET-----VWKVENSDIK--VGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDK 205 (599)
T ss_dssp EEEEETTTCCE-----EEEEECCCGG--GTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHH
T ss_pred EEEEECCCCCE-----EEeecCCCCC--ccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcc
Confidence 99999998863 5654322100 011222223335789999874 5789999974 99999862211000
Q ss_pred cc---cc-------------ccc------cCCCCCccccceEEEcCCCeEEEEcCC----------------CeEEEEeC
Q 006913 172 GY---RQ-------------GCT------KTDVDCYFTSVPVIDQCEGSIYISNTQ----------------GELYSLSA 213 (626)
Q Consensus 172 ~~---~~-------------~~~------~~l~~~~i~sspviD~~dG~LwIGT~~----------------GgL~~ld~ 213 (626)
.. .. +.. -...+......+.+|...+.||+++.+ +.|+++|+
T Consensus 206 ~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~ 285 (599)
T 1w6s_A 206 DLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDA 285 (599)
T ss_dssp HHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEET
T ss_pred ccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeC
Confidence 00 00 000 000011122346676546778888765 36888888
Q ss_pred CCCeEEEEEcC
Q 006913 214 HSPYFNWIQDL 224 (626)
Q Consensus 214 ~tg~~~w~~~~ 224 (626)
++|+++|.+..
T Consensus 286 ~TG~~~W~~q~ 296 (599)
T 1w6s_A 286 DTGEAKFGYQK 296 (599)
T ss_dssp TTCCEEEEEES
T ss_pred CCCceeeEeec
Confidence 88888887654
No 14
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.57 E-value=3.7e-12 Score=146.89 Aligned_cols=288 Identities=15% Similarity=0.193 Sum_probs=179.1
Q ss_pred eeeeeEEeeCCEEEEEe-CCcEEEEcC-CCCEEEEEeCCCCC---------CcccCeEEecCCeEEEEE-CCeEEEEECC
Q 006913 38 RLSKPLIGEDGKIYACS-EKTLFAFES-NGTIAWSLDLDFTC---------NIGTAPVHGGTGEVYIVA-ENRVLKVDLL 105 (626)
Q Consensus 38 ~~Sspvid~dG~IwIgS-dggL~a~d~-~G~~~W~~~~~~~~---------~i~~sp~iD~dG~IwVgT-~ggL~~id~~ 105 (626)
+.++|++ .+|.||+++ ++.|+++|. +|+.+|++...... ....+|.+ .++.||+++ ++.|+++|..
T Consensus 62 ~~~~P~v-~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~v~v~~~dg~l~AlDa~ 139 (689)
T 1yiq_A 62 VEATPIV-VDGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV-WKGKVYVGVLDGRLEAIDAK 139 (689)
T ss_dssp CCCCCEE-ETTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE-ETTEEEEECTTSEEEEEETT
T ss_pred ceecCEE-ECCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE-ECCEEEEEccCCEEEEEECC
Confidence 5788998 789999998 567999998 99999998754210 11234565 468999998 8899999999
Q ss_pred CCccccceeEEEecCC-CCCCCCCCeeEEEEEEcCCeEEEEEc------CCeEEEEeC-CCcEEEEECCcccc-c-cccc
Q 006913 106 KIGTSESATQVFYGTG-SGKGGTGAIAGIAVSTSSSSVYINVK------GRALFAFMT-HGQLLWSAGPVLDQ-L-GYRQ 175 (626)
Q Consensus 106 ~~~~~~~~~~~~~~~~-~~~~~~~~~I~s~~~d~dG~LwIgT~------~gGL~a~d~-~G~~~w~~~~~~~~-~-~~~~ 175 (626)
+++ ..|.+... ... . ...+...+...++.|++++. ++.|+++|. +|+++|.+...... . .+..
T Consensus 140 TG~-----~~W~~~~~~~~~-~-~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~ 212 (689)
T 1yiq_A 140 TGQ-----RAWSVDTRADHK-R-SYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEG 212 (689)
T ss_dssp TCC-----EEEEEECCSCTT-S-CCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCS
T ss_pred CCC-----EeeeecCcCCCC-C-CccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCccccccc
Confidence 886 35655432 100 0 01122222335789999863 367999997 59999986221000 0 0000
Q ss_pred -----ccccC--------CCCCccccceEEEcCCCeEEEEcCCCe-------------------EEEEeCCCCeEEEEEc
Q 006913 176 -----GCTKT--------DVDCYFTSVPVIDQCEGSIYISNTQGE-------------------LYSLSAHSPYFNWIQD 223 (626)
Q Consensus 176 -----~~~~~--------l~~~~i~sspviD~~dG~LwIGT~~Gg-------------------L~~ld~~tg~~~w~~~ 223 (626)
..... ..+......+.+|...+.||+++.++. |+++|+++|+..|.+.
T Consensus 213 ~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~ 292 (689)
T 1yiq_A 213 KGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQ 292 (689)
T ss_dssp HHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEE
T ss_pred ccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeee
Confidence 00000 001112245677754788999987753 9999999999999764
Q ss_pred CCC-----CCc----c-e----------e---------------------------------------------------
Q 006913 224 LSS-----FDK----A-F----------T--------------------------------------------------- 232 (626)
Q Consensus 224 ~~s-----~~~----v-~----------s--------------------------------------------------- 232 (626)
... .+. + . .
T Consensus 293 ~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~ 372 (689)
T 1yiq_A 293 TTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAY 372 (689)
T ss_dssp SSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCT
T ss_pred cCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccc
Confidence 310 000 0 0 0
Q ss_pred ---------------------eeee-cCCeEEEEEcC-------------------------------------------
Q 006913 233 ---------------------LTPG-NNGYLYVTIPV------------------------------------------- 247 (626)
Q Consensus 233 ---------------------I~~D-~dG~LwVGT~~------------------------------------------- 247 (626)
++.| ..|.+|+++..
T Consensus 373 ~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~ 452 (689)
T 1yiq_A 373 WKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKS 452 (689)
T ss_dssp TTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTT
T ss_pred cCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCC
Confidence 1112 12455554311
Q ss_pred -CCEEEEEECCCCcEEEEEecCCCCCceeeEEEeeCCeEEEEEcCCeEEEEcC-CCCEEEEeeccCCCCccccCceEEEE
Q 006913 248 -RALVLALDTSSGNILWHKSVGPLGSAEYAPVVDSNGWISVGSLDGLLYSFSP-SGVLNKFSKSDTSDSVIQSSPYWFHL 325 (626)
Q Consensus 248 -gG~l~alD~~tG~~~w~~~~~~l~~~~sspvvD~dG~IWVGT~~gGLy~~d~-~g~~~~~~~~~~~~~~ilssp~V~~I 325 (626)
.+.+.++|+.||+++|+...+. .....++...+|.|++|+.++.|++||. +|+.+|..+.. ..+...|..+
T Consensus 453 ~~g~l~A~D~~tG~~~W~~~~~~--~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~---~~~~~~p~ty-- 525 (689)
T 1yiq_A 453 WSGKLIAWDPVKQQAAWEVPYVT--IFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAA---SGVMAAPVTY-- 525 (689)
T ss_dssp CEEEEEEEETTTTEEEEEEEESS--SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS---SCCCSCCEEE--
T ss_pred cceeEEEEECCCCCeEeEccCCC--CccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCC---CCcccCceEE--
Confidence 1568888888899888876542 1122344445889999999999999997 59999976621 1134455432
Q ss_pred EEecCCcEEEEEeeecCe
Q 006913 326 LGPSIGLKAILCLMVVGQ 343 (626)
Q Consensus 326 l~DsdG~IwI~T~t~~Gg 343 (626)
..+|..||.+....|+
T Consensus 526 --~~~G~qyv~~~~G~gg 541 (689)
T 1yiq_A 526 --SVDGEQYVTFMAGWGG 541 (689)
T ss_dssp --EETTEEEEEEEECCCT
T ss_pred --EECCEEEEEEEecCCc
Confidence 4689999888764333
No 15
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.56 E-value=2.7e-11 Score=121.49 Aligned_cols=241 Identities=12% Similarity=0.036 Sum_probs=156.0
Q ss_pred cccCeEEecCCeEEEEE--CCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEc-CCeEEEEe
Q 006913 79 IGTAPVHGGTGEVYIVA--ENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVK-GRALFAFM 155 (626)
Q Consensus 79 i~~sp~iD~dG~IwVgT--~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~-~gGL~a~d 155 (626)
...++.+|.+|++|+++ +++|+.+|+. +.+ ..+.... ....+..+..+.+|+||+++. +++|+.++
T Consensus 16 ~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~----~~~~~~~------~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~ 84 (299)
T 2z2n_A 16 GPYGITVSDKGKVWITQHKANMISCINLD-GKI----TEYPLPT------PDAKVMCLTISSDGEVWFTENAANKIGRIT 84 (299)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTT-CCE----EEEECSS------TTCCEEEEEECTTSCEEEEETTTTEEEEEC
T ss_pred CccceEECCCCCEEEEecCCCcEEEEcCC-CCe----EEecCCc------ccCceeeEEECCCCCEEEeCCCCCeEEEEC
Confidence 34567889999999998 4789999988 431 1111110 112345566778999999987 46799999
Q ss_pred CCCcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcC-CCeEEEEeCCCCeEEEEEcCCCCCcceeee
Q 006913 156 THGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNT-QGELYSLSAHSPYFNWIQDLSSFDKAFTLT 234 (626)
Q Consensus 156 ~~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~-~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~ 234 (626)
++|+..... .+ .. ......+++++ +|.||+++. +++|+++|+ ++++...........+..++
T Consensus 85 ~~g~~~~~~------~~------~~---~~~~~~i~~~~-~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~ 147 (299)
T 2z2n_A 85 KKGIIKEYT------LP------NP---DSAPYGITEGP-NGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFIT 147 (299)
T ss_dssp TTSCEEEEE------CS------ST---TCCEEEEEECT-TSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEE
T ss_pred CCCcEEEEe------CC------Cc---CCCceeeEECC-CCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEE
Confidence 886643221 00 00 00123466775 899999864 678999999 55554432221223456788
Q ss_pred eecCCeEEEEEcCCCEEEEEECCCCcEEEEEecCCCCCceeeEEEeeCCeEEEEEc-CCeEEEEcCCCCEEEEeeccCCC
Q 006913 235 PGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPVVDSNGWISVGSL-DGLLYSFSPSGVLNKFSKSDTSD 313 (626)
Q Consensus 235 ~D~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~~~sspvvD~dG~IWVGT~-~gGLy~~d~~g~~~~~~~~~~~~ 313 (626)
.+.+|++|+++...+.++.+|+ +|++........ ......+.++++|.||+++. +++|++++++++...+.. .
T Consensus 148 ~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~-~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~---~- 221 (299)
T 2z2n_A 148 LGSDNALWFTENQNNAIGRITE-SGDITEFKIPTP-ASGPVGITKGNDDALWFVEIIGNKIGRITTSGEITEFKI---P- 221 (299)
T ss_dssp ECTTSCEEEEETTTTEEEEECT-TCCEEEEECSST-TCCEEEEEECTTSSEEEEETTTTEEEEECTTCCEEEEEC---S-
T ss_pred EcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCC-CCcceeEEECCCCCEEEEccCCceEEEECCCCcEEEEEC---C-
Confidence 8999999999865678999997 787654321111 12345678888999999985 578999999776544322 1
Q ss_pred CccccCceEEEEEEecCCcEEEEEeeecCeeEEecccCCcceee
Q 006913 314 SVIQSSPYWFHLLGPSIGLKAILCLMVVGQFSSLLSKSDLQHFV 357 (626)
Q Consensus 314 ~~ilssp~V~~Il~DsdG~IwI~T~t~~Ggl~~~~~~~d~~~f~ 357 (626)
.....+..|..|.+|++|+++.. .+++..+.....+..+.
T Consensus 222 ---~~~~~~~~i~~~~~g~l~v~~~~-~~~i~~~d~~g~~~~~~ 261 (299)
T 2z2n_A 222 ---TPNARPHAITAGAGIDLWFTEWG-ANKIGRLTSNNIIEEYP 261 (299)
T ss_dssp ---STTCCEEEEEECSTTCEEEEETT-TTEEEEEETTTEEEEEE
T ss_pred ---CCCCCceeEEECCCCCEEEeccC-CceEEEECCCCceEEEe
Confidence 12234568899999999976522 35665553344445554
No 16
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.55 E-value=8.1e-12 Score=141.04 Aligned_cols=275 Identities=17% Similarity=0.155 Sum_probs=176.4
Q ss_pred eeeEEeeCCEEEEEe-CCcEEEEcC-CCCEEEEEeCCCC---CCcccCeEEecCCeEEEEE-------CCeEEEEECCCC
Q 006913 40 SKPLIGEDGKIYACS-EKTLFAFES-NGTIAWSLDLDFT---CNIGTAPVHGGTGEVYIVA-------ENRVLKVDLLKI 107 (626)
Q Consensus 40 Sspvid~dG~IwIgS-dggL~a~d~-~G~~~W~~~~~~~---~~i~~sp~iD~dG~IwVgT-------~ggL~~id~~~~ 107 (626)
.+|++ .++.||+++ ++.|+++|. +|+.+|++..... ..+..+|+++ +|.||+++ ++.|+++|..++
T Consensus 109 ~~~~~-~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~-~g~v~vg~~~~~~~~~g~v~a~D~~tG 186 (571)
T 2ad6_A 109 RGLAY-GAGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVA-KDTVLMGCSGAELGVRGAVNAFDLKTG 186 (571)
T ss_dssp CCCEE-ETTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TTEEEEECBCGGGTCCCEEEEEETTTC
T ss_pred cccEE-ECCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEE-CCEEEEEecCCccCCCCEEEEEECCCC
Confidence 45777 688999998 678999998 9999999876431 1244577774 68999986 368999999988
Q ss_pred ccccceeEEEecCCCCC--------------------------------CCCCCeeEEEEEE-cCCeEEEEEcC------
Q 006913 108 GTSESATQVFYGTGSGK--------------------------------GGTGAIAGIAVST-SSSSVYINVKG------ 148 (626)
Q Consensus 108 ~~~~~~~~~~~~~~~~~--------------------------------~~~~~~I~s~~~d-~dG~LwIgT~~------ 148 (626)
+. .|.+...... ...+.....+..+ ..+.||+++.+
T Consensus 187 ~~-----~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~ 261 (571)
T 2ad6_A 187 EL-----KWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNE 261 (571)
T ss_dssp CE-----EEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCG
T ss_pred cE-----EEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccC
Confidence 63 5544322110 0000111122333 46889998742
Q ss_pred ----------CeEEEEeCC-CcEEEEECCcccccccccccccCCCCCccccceEE-Ec-CCC----eEEEEcCCCeEEEE
Q 006913 149 ----------RALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVI-DQ-CEG----SIYISNTQGELYSL 211 (626)
Q Consensus 149 ----------gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspvi-D~-~dG----~LwIGT~~GgL~~l 211 (626)
+.|+++|++ |+.+|.+.. . .+..-+.....+|++ +. .+| .+++++.+|.|++|
T Consensus 262 ~~~~gd~~y~~~v~Ald~~tG~~~W~~~~-----~-----~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~l 331 (571)
T 2ad6_A 262 TMRPGDNKWTMTIWGRDLDTGMAKWGYQK-----T-----PHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTL 331 (571)
T ss_dssp GGSCSCCTTTTEEEEEETTTCCEEEEEES-----S-----TTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEE
T ss_pred CccCCCceeEEEEEEEecCCCcEEEEecC-----C-----CCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEE
Confidence 259999984 999998621 0 000000011233443 31 145 36778889999999
Q ss_pred eCCCCeEEEEEcCCC-CC----------c-c--------------------------eeeeeec-CCeEEEEEc------
Q 006913 212 SAHSPYFNWIQDLSS-FD----------K-A--------------------------FTLTPGN-NGYLYVTIP------ 246 (626)
Q Consensus 212 d~~tg~~~w~~~~~s-~~----------~-v--------------------------~sI~~D~-dG~LwVGT~------ 246 (626)
|+++|++.|...... .. . + ..++.|. .|.+|+.+.
T Consensus 332 D~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~ 411 (571)
T 2ad6_A 332 NRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDW 411 (571)
T ss_dssp ETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEE
T ss_pred ECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccc
Confidence 999999999865321 00 0 0 1123443 467777652
Q ss_pred ------------------------------CCCEEEEEECCCCcEEEEEecCCCCCceeeEEEeeCCeEEEEEcCCeEEE
Q 006913 247 ------------------------------VRALVLALDTSSGNILWHKSVGPLGSAEYAPVVDSNGWISVGSLDGLLYS 296 (626)
Q Consensus 247 ------------------------------~gG~l~alD~~tG~~~w~~~~~~l~~~~sspvvD~dG~IWVGT~~gGLy~ 296 (626)
..+.++++|..+|+.+|...... .....++...+|.||+|+.++.|++
T Consensus 412 ~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~--~~~~~~~~t~gg~v~~g~~dg~l~a 489 (571)
T 2ad6_A 412 EPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKF--AAWGGTLYTKGGLVWYATLDGYLKA 489 (571)
T ss_dssp EECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESS--CCCSBCEEETTTEEEEECTTSEEEE
T ss_pred cccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCC--CccceeEEECCCEEEEEcCCCeEEE
Confidence 23689999999999999976552 1233444545899999999999999
Q ss_pred EcC-CCCEEEEeeccCCCCccccCceEEEEEEecCCcEEEEEeee
Q 006913 297 FSP-SGVLNKFSKSDTSDSVIQSSPYWFHLLGPSIGLKAILCLMV 340 (626)
Q Consensus 297 ~d~-~g~~~~~~~~~~~~~~ilssp~V~~Il~DsdG~IwI~T~t~ 340 (626)
+|. +|+.+|..... .. +..+|.+ + ..+|.+|+++...
T Consensus 490 ~D~~tG~~lw~~~~~--~~-~~~~p~~---~-~~~G~~yv~~~~G 527 (571)
T 2ad6_A 490 LDNKDGKELWNFKMP--SG-GIGSPMT---Y-SFKGKQYIGSMYG 527 (571)
T ss_dssp EETTTCCEEEEEECS--SC-CCSCCEE---E-EETTEEEEEEEEC
T ss_pred EECCCCCEEEEEeCC--CC-cEeeeEE---E-EECCEEEEEEECC
Confidence 997 59999976632 11 3445543 2 3579999887654
No 17
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.54 E-value=3.2e-12 Score=130.81 Aligned_cols=235 Identities=11% Similarity=0.055 Sum_probs=158.6
Q ss_pred CEEE-EEe-CCcEEEEcC-CCCEEEEEeCCCCCCcccCeEEecCCeEEEEECCeEEEEECCCCccccceeEEEecCCCCC
Q 006913 48 GKIY-ACS-EKTLFAFES-NGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAENRVLKVDLLKIGTSESATQVFYGTGSGK 124 (626)
Q Consensus 48 G~Iw-IgS-dggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~dG~IwVgT~ggL~~id~~~~~~~~~~~~~~~~~~~~~ 124 (626)
|++. +++ ++.++++|. +|+++|++..... ....++.+..+|++++..+++|+.+|+ +++ ..|.+...
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~-~~~~~~~~~pdG~ilvs~~~~V~~~d~-~G~-----~~W~~~~~--- 74 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKG-WECNSVAATKAGEILFSYSKGAKMITR-DGR-----ELWNIAAP--- 74 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCTT-CCCCEEEECTTSCEEEECBSEEEEECT-TSC-----EEEEEECC---
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCcc-CCCcCeEECCCCCEEEeCCCCEEEECC-CCC-----EEEEEcCC---
Confidence 4444 444 678999999 9999999876431 123455667899999955889999999 454 46665431
Q ss_pred CCCCCeeEEEEEEcCCeEEEEEc--CCeEEEEeCCCcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEE
Q 006913 125 GGTGAIAGIAVSTSSSSVYINVK--GRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYIS 202 (626)
Q Consensus 125 ~~~~~~I~s~~~d~dG~LwIgT~--~gGL~a~d~~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIG 202 (626)
....+.......+|+++++.. ++.+++++++|+.+|.+.. . ....... .. ......+. +|++++.
T Consensus 75 --~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~-----~--~~~~~~~--~~-~~~v~~~~-~G~~lv~ 141 (276)
T 3no2_A 75 --AGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEF-----E--TGIERPH--AQ-FRQINKNK-KGNYLVP 141 (276)
T ss_dssp --TTCEEEEEEECTTSCEEEEEESTTEEEEEECTTSCEEEEEEE-----C--CSCSSGG--GS-CSCCEECT-TSCEEEE
T ss_pred --CCccccccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEEec-----c--CCCCccc--cc-ccCceECC-CCCEEEE
Confidence 112344455567888888754 4568899999999998511 0 0000000 00 11123443 6666654
Q ss_pred -cCCCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCCeEEEEEcCCCEEEEEECCCCcEEEEEecCCCC----CceeeE
Q 006913 203 -NTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLG----SAEYAP 277 (626)
Q Consensus 203 -T~~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~----~~~ssp 277 (626)
..++.|+++|++ |++.|...... .+.++....+|+++|+...++.++++|+.+|+++|++...... .....+
T Consensus 142 ~~~~~~v~~~d~~-G~~~w~~~~~~--~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~ 218 (276)
T 3no2_A 142 LFATSEVREIAPN-GQLLNSVKLSG--TPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQL 218 (276)
T ss_dssp ETTTTEEEEECTT-SCEEEEEECSS--CCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEE
T ss_pred ecCCCEEEEECCC-CCEEEEEECCC--CccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccc
Confidence 457889999999 79999876532 2334556678999988766778999999999999998543111 124556
Q ss_pred EEeeCCeEEEEEcC-----------CeEEEEcCCCCEEEEee
Q 006913 278 VVDSNGWISVGSLD-----------GLLYSFSPSGVLNKFSK 308 (626)
Q Consensus 278 vvD~dG~IWVGT~~-----------gGLy~~d~~g~~~~~~~ 308 (626)
....+|+++|+.++ +.++.++++|++.|.+.
T Consensus 219 ~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~~~W~~~ 260 (276)
T 3no2_A 219 FPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGKVVWQLN 260 (276)
T ss_dssp EECTTSCEEEEEECTTCTTGGGSCCCSEEEECTTSBEEEEEC
T ss_pred eEcCCCCEEEEeccCccccccccCCceEEEECCCCCEEEEec
Confidence 67779999999853 35999999999999765
No 18
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=99.54 E-value=1.2e-11 Score=139.96 Aligned_cols=279 Identities=15% Similarity=0.157 Sum_probs=176.5
Q ss_pred eeeEEeeCCEEEEEe-CCcEEEEcC-CCCEEEEEeCCCC---CCcccCeEEecC---C--eEEEEE-------CCeEEEE
Q 006913 40 SKPLIGEDGKIYACS-EKTLFAFES-NGTIAWSLDLDFT---CNIGTAPVHGGT---G--EVYIVA-------ENRVLKV 102 (626)
Q Consensus 40 Sspvid~dG~IwIgS-dggL~a~d~-~G~~~W~~~~~~~---~~i~~sp~iD~d---G--~IwVgT-------~ggL~~i 102 (626)
.+|++ .++.||+++ ++.|+++|. +|+.+|++..... .....+|++..+ | .||+++ ++.|+++
T Consensus 111 ~g~a~-~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~al 189 (582)
T 1flg_A 111 RGAAI-YGDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFAR 189 (582)
T ss_dssp CCCEE-ETTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEE
T ss_pred CccEE-ECCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEE
Confidence 45666 688999998 678999998 9999999876431 123456776433 2 788875 4689999
Q ss_pred ECCCCccccceeEEEecCCC---------------------CCC--------------CCCCeeEEEEEE-cCCeEEEEE
Q 006913 103 DLLKIGTSESATQVFYGTGS---------------------GKG--------------GTGAIAGIAVST-SSSSVYINV 146 (626)
Q Consensus 103 d~~~~~~~~~~~~~~~~~~~---------------------~~~--------------~~~~~I~s~~~d-~dG~LwIgT 146 (626)
|..+++. .|...... |.. ..+.....+..+ ..+.||+++
T Consensus 190 D~~tG~~-----~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~ 264 (582)
T 1flg_A 190 DPDTGEE-----IWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGA 264 (582)
T ss_dssp CTTTCCE-----EEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEE
T ss_pred ECCCCCE-----EeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeC
Confidence 9998864 44332210 000 001111223344 568899988
Q ss_pred cC------------------------CeEEEEeC-CCcEEEEECCcccccccccccccCCCCCccccceEE-Ec--CCC-
Q 006913 147 KG------------------------RALFAFMT-HGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVI-DQ--CEG- 197 (626)
Q Consensus 147 ~~------------------------gGL~a~d~-~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspvi-D~--~dG- 197 (626)
.+ +.|+++|+ +|+.+|.+.... +..-+.....+|++ +. .+|
T Consensus 265 gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~----------~d~wd~~~~~~p~l~~~~~~~G~ 334 (582)
T 1flg_A 265 GNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTP----------NDAWDFSGNNELVLFDYKAKDGK 334 (582)
T ss_dssp CCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESST----------TCCSCCCCCCCCEEEEEECSSSC
T ss_pred CCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCC----------CCcccccCCCCcEEEeeecCCCC
Confidence 31 47999998 599999862100 00000001123333 31 134
Q ss_pred ---eEEEEcCCCeEEEEeCCCCeEEEEEcCCC-CC----------c---------------------------------c
Q 006913 198 ---SIYISNTQGELYSLSAHSPYFNWIQDLSS-FD----------K---------------------------------A 230 (626)
Q Consensus 198 ---~LwIGT~~GgL~~ld~~tg~~~w~~~~~s-~~----------~---------------------------------v 230 (626)
.|++++.+|.||++|+++|++.|...... .. . -
T Consensus 335 ~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w 414 (582)
T 1flg_A 335 IVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNW 414 (582)
T ss_dssp EEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCS
T ss_pred EEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCC
Confidence 57788899999999999999999765421 00 0 0
Q ss_pred eeeeeec-CCeEEEEEc--------------------------------CCCEEEEEECCCCcEEEEEecCCCCCceeeE
Q 006913 231 FTLTPGN-NGYLYVTIP--------------------------------VRALVLALDTSSGNILWHKSVGPLGSAEYAP 277 (626)
Q Consensus 231 ~sI~~D~-dG~LwVGT~--------------------------------~gG~l~alD~~tG~~~w~~~~~~l~~~~ssp 277 (626)
..++.|. .|.+|+... ..+.++++|+.+|+++|+..... .....+
T Consensus 415 ~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~--~~~~g~ 492 (582)
T 1flg_A 415 NPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHL--PLWAGV 492 (582)
T ss_dssp SCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESS--CCCSCC
T ss_pred CCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCC--CCcccc
Confidence 0122232 356776542 13689999999999999876542 122334
Q ss_pred EEeeCCeEEEEEcCCeEEEEcC-CCCEEEEeeccCCCCccccCceEEEEEEecCCcEEEEEeeecCe
Q 006913 278 VVDSNGWISVGSLDGLLYSFSP-SGVLNKFSKSDTSDSVIQSSPYWFHLLGPSIGLKAILCLMVVGQ 343 (626)
Q Consensus 278 vvD~dG~IWVGT~~gGLy~~d~-~g~~~~~~~~~~~~~~ilssp~V~~Il~DsdG~IwI~T~t~~Gg 343 (626)
+...+|.||+|+.++.|++||. +|+.+|..+. ...+..+|.++ ..+|..||.+....|+
T Consensus 493 ~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~---~~g~~a~P~~y----~~~G~qYv~~~~G~gg 552 (582)
T 1flg_A 493 LATAGNLVFTGTGDGYFKAFDAKSGKELWKFQT---GSGIVSPPITW----EQDGEQYLGVTVGYGG 552 (582)
T ss_dssp EEETTTEEEEECTTSEEEEEETTTCCEEEEEEC---SSCCCSCCEEE----EETTEEEEEEEECCCS
T ss_pred eEeCCCEEEEECCCCcEEEEECCCCCEEEEecC---CCCcccCceEE----EECCEEEEEEEccCCC
Confidence 4445899999999999999997 5999997763 22234556542 3689999988764333
No 19
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.54 E-value=2e-11 Score=137.76 Aligned_cols=221 Identities=15% Similarity=0.163 Sum_probs=139.6
Q ss_pred eeeeeEEeeCCEEEEEeC--CcEEEEcC--CCCEEEEEeCCCCC---------CcccCeEEecCCeEEEEE-CCeEEEEE
Q 006913 38 RLSKPLIGEDGKIYACSE--KTLFAFES--NGTIAWSLDLDFTC---------NIGTAPVHGGTGEVYIVA-ENRVLKVD 103 (626)
Q Consensus 38 ~~Sspvid~dG~IwIgSd--ggL~a~d~--~G~~~W~~~~~~~~---------~i~~sp~iD~dG~IwVgT-~ggL~~id 103 (626)
+.++|++ .+|.||+++. +.|+++|. +|+.+|++...... ....+|.+ .++.||+++ ++.|+++|
T Consensus 54 ~~~~P~v-~~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~v~~~dg~l~alD 131 (571)
T 2ad6_A 54 HEGAPLV-IGDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY-GAGQIVKKQANGHLLALD 131 (571)
T ss_dssp CCSCCEE-ETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE-ETTEEEEECTTSEEEEEE
T ss_pred cccccEE-ECCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE-ECCEEEEEeCCCEEEEEE
Confidence 5689998 6899999985 56999996 89999998764321 11234666 468999998 78999999
Q ss_pred CCCCccccceeEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEc------CCeEEEEeC-CCcEEEEECCccccccc---
Q 006913 104 LLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVK------GRALFAFMT-HGQLLWSAGPVLDQLGY--- 173 (626)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~------~gGL~a~d~-~G~~~w~~~~~~~~~~~--- 173 (626)
..+++ ..|.+....... ...+...+...++.||+++. ++.|+++|+ +|+.+|.+.........
T Consensus 132 ~~tG~-----~~W~~~~~~~~~--~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~ 204 (571)
T 2ad6_A 132 AKTGK-----INWEVEVCDPKV--GSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLA 204 (571)
T ss_dssp TTTCC-----EEEEEECCCGGG--TCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBC
T ss_pred CCCCC-----EEEEecCCCCCc--cceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccC
Confidence 98886 356543221100 01122222334789999976 578999998 59999986221000000
Q ss_pred cc-------------cccc------CCCCCccccceEEEcCCCeEEEEcCC----------------CeEEEEeCCCCeE
Q 006913 174 RQ-------------GCTK------TDVDCYFTSVPVIDQCEGSIYISNTQ----------------GELYSLSAHSPYF 218 (626)
Q Consensus 174 ~~-------------~~~~------~l~~~~i~sspviD~~dG~LwIGT~~----------------GgL~~ld~~tg~~ 218 (626)
.. +... ...+......+.+|...+.||+++.+ +.|+++|+++|++
T Consensus 205 p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~ 284 (571)
T 2ad6_A 205 KDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMA 284 (571)
T ss_dssp TTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCE
T ss_pred cccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcE
Confidence 00 0000 00011112346777546899999853 2599999999999
Q ss_pred EEEEcCCCC-----Cccee-eeee--cCCe----EEEEEcCCCEEEEEECCCCcEEEEEecC
Q 006913 219 NWIQDLSSF-----DKAFT-LTPG--NNGY----LYVTIPVRALVLALDTSSGNILWHKSVG 268 (626)
Q Consensus 219 ~w~~~~~s~-----~~v~s-I~~D--~dG~----LwVGT~~gG~l~alD~~tG~~~w~~~~~ 268 (626)
+|.+..... +.... +..+ .+|+ +++++ .+|.++++|+.+|+++|.....
T Consensus 285 ~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~-~~G~l~~lD~~tG~~~w~~~~~ 345 (571)
T 2ad6_A 285 KWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHID-RNGILYTLNRENGNLIVAEKVD 345 (571)
T ss_dssp EEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEEC-TTSEEEEEETTTCCEEEEEESS
T ss_pred EEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeC-CCcEEEEEECCCCCEEeeeccc
Confidence 999764311 11111 2223 3673 45555 5689999999999999987544
No 20
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.53 E-value=4.8e-11 Score=119.69 Aligned_cols=240 Identities=10% Similarity=0.054 Sum_probs=155.8
Q ss_pred ccCeEEecCCeEEEEE--CCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEc-CCeEEEEeC
Q 006913 80 GTAPVHGGTGEVYIVA--ENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVK-GRALFAFMT 156 (626)
Q Consensus 80 ~~sp~iD~dG~IwVgT--~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~-~gGL~a~d~ 156 (626)
..++.+|.+|+||+++ +++|.++++. +.+ ..+.... ....+..+..+.+|+||+++. +++|+.+|+
T Consensus 22 p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~----~~~~~~~------~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~ 90 (300)
T 2qc5_A 22 PYGITSSEDGKVWFTQHKANKISSLDQS-GRI----KEFEVPT------PDAKVMCLIVSSLGDIWFTENGANKIGKLSK 90 (300)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEECTT-SCE----EEEECSS------TTCCEEEEEECTTSCEEEEETTTTEEEEECT
T ss_pred cceeeECCCCCEEEEcCCCCeEEEECCC-Cce----EEEECCC------CCCcceeEEECCCCCEEEEecCCCeEEEECC
Confidence 4467788999999998 4899999988 432 1121110 112345566678899999986 467999998
Q ss_pred CCcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcC-CCeEEEEeCCCCeEEEEEcCCCCCcceeeee
Q 006913 157 HGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNT-QGELYSLSAHSPYFNWIQDLSSFDKAFTLTP 235 (626)
Q Consensus 157 ~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~-~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~ 235 (626)
+|+......+ .. .. ....+++++ +|+||+++. +++|+++|++ +++...........+..++.
T Consensus 91 ~g~~~~~~~~------------~~--~~-~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~ 153 (300)
T 2qc5_A 91 KGGFTEYPLP------------QP--DS-GPYGITEGL-NGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITL 153 (300)
T ss_dssp TSCEEEEECS------------ST--TC-CEEEEEECS-TTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEE
T ss_pred CCCeEEecCC------------CC--CC-CCccceECC-CCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEE
Confidence 8765322100 00 01 123466775 899999876 6789999998 56654322112234567888
Q ss_pred ecCCeEEEEEcCCCEEEEEECCCCcEEEEEecCCCCCceeeEEEeeCCeEEEEEcC-CeEEEEcCCCCEEEEeeccCCCC
Q 006913 236 GNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPVVDSNGWISVGSLD-GLLYSFSPSGVLNKFSKSDTSDS 314 (626)
Q Consensus 236 D~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~~~sspvvD~dG~IWVGT~~-gGLy~~d~~g~~~~~~~~~~~~~ 314 (626)
|.+|+||+++..++.++.+|. +|++.. ............++++++|+||+++.. ++|++++++++...+... .
T Consensus 154 d~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~---~- 227 (300)
T 2qc5_A 154 GSDNALWFTENQNNSIGRITN-TGKLEE-YPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITTTGEISEYDIP---T- 227 (300)
T ss_dssp CTTSSEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTCCEEEEECS---S-
T ss_pred CCCCCEEEEecCCCeEEEECC-CCcEEE-eeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcCCCcEEEEECC---C-
Confidence 999999999866678999997 777653 222211123456788889999999864 579999997776554321 1
Q ss_pred ccccCceEEEEEEecCCcEEEEEeeecCeeEEecccCCcceee
Q 006913 315 VIQSSPYWFHLLGPSIGLKAILCLMVVGQFSSLLSKSDLQHFV 357 (626)
Q Consensus 315 ~ilssp~V~~Il~DsdG~IwI~T~t~~Ggl~~~~~~~d~~~f~ 357 (626)
....+..|..|.+|+||+.+. ..+.+..+.....+..|.
T Consensus 228 ---~~~~~~~i~~d~~g~l~v~~~-~~~~i~~~~~~g~~~~~~ 266 (300)
T 2qc5_A 228 ---PNARPHAITAGKNSEIWFTEW-GANQIGRITNDNTIQEYQ 266 (300)
T ss_dssp ---TTCCEEEEEECSTTCEEEEET-TTTEEEEECTTSCEEEEE
T ss_pred ---CCCCceEEEECCCCCEEEecc-CCCeEEEECCCCcEEEEE
Confidence 123356788999999997652 235665554444444443
No 21
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.52 E-value=2.3e-11 Score=139.74 Aligned_cols=178 Identities=17% Similarity=0.248 Sum_probs=114.6
Q ss_pred eeeeeEEeeCCEEEEEe-CCcEEEEcC-CCCEEEEEeCCCC--------CC-cccCeEEecCCeEEEEE-CCeEEEEECC
Q 006913 38 RLSKPLIGEDGKIYACS-EKTLFAFES-NGTIAWSLDLDFT--------CN-IGTAPVHGGTGEVYIVA-ENRVLKVDLL 105 (626)
Q Consensus 38 ~~Sspvid~dG~IwIgS-dggL~a~d~-~G~~~W~~~~~~~--------~~-i~~sp~iD~dG~IwVgT-~ggL~~id~~ 105 (626)
+.++|++ .+|.||+++ ++.|+++|. +|+.+|++..... +. ....|.+ .++.||+++ ++.|+++|..
T Consensus 58 ~~~~P~v-~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~v~~~dg~l~alD~~ 135 (668)
T 1kv9_A 58 LEATPLF-HDGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL-WGDKVYVGTLDGRLIALDAK 135 (668)
T ss_dssp CCCCCEE-ETTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE-EBTEEEEECTTSEEEEEETT
T ss_pred cccCCEE-ECCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE-ECCEEEEEcCCCEEEEEECC
Confidence 5788998 789999998 567999998 9999999876421 00 1234565 468999998 8899999999
Q ss_pred CCccccceeEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEcC------CeEEEEeC-CCcEEEEECCcccc--ccccc-
Q 006913 106 KIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKG------RALFAFMT-HGQLLWSAGPVLDQ--LGYRQ- 175 (626)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~~------gGL~a~d~-~G~~~w~~~~~~~~--~~~~~- 175 (626)
+++ ..|.+....... ...+...+...++.||+++.+ +.|+++|. +|+.+|.+...... .....
T Consensus 136 tG~-----~~W~~~~~~~~~--~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~ 208 (668)
T 1kv9_A 136 TGK-----AIWSQQTTDPAK--PYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHP 208 (668)
T ss_dssp TCC-----EEEEEECSCTTS--SCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSH
T ss_pred CCC-----EeeeeccCCCCC--cceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCcccccc
Confidence 886 356543321100 111122223357899998653 67999997 59999986221000 00000
Q ss_pred ----ccccC-C-------CCCccccceEEEcCCCeEEEEcCCCe-------------------EEEEeCCCCeEEEEEcC
Q 006913 176 ----GCTKT-D-------VDCYFTSVPVIDQCEGSIYISNTQGE-------------------LYSLSAHSPYFNWIQDL 224 (626)
Q Consensus 176 ----~~~~~-l-------~~~~i~sspviD~~dG~LwIGT~~Gg-------------------L~~ld~~tg~~~w~~~~ 224 (626)
..... . .+.....++.+|...+.||+++.++. |+++|+++|++.|.+..
T Consensus 209 ~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~ 288 (668)
T 1kv9_A 209 ELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQV 288 (668)
T ss_dssp HHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEES
T ss_pred ccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeec
Confidence 00000 0 01122345778754688999987653 99999999999998754
No 22
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=99.52 E-value=2.6e-11 Score=137.17 Aligned_cols=220 Identities=13% Similarity=0.141 Sum_probs=138.8
Q ss_pred eeeeeEEeeCCEEEEEeC-CcEEEEcC-CCCEEEEEeCCCCCC-------cccCeEEecCCeEEEEE-CCeEEEEECCCC
Q 006913 38 RLSKPLIGEDGKIYACSE-KTLFAFES-NGTIAWSLDLDFTCN-------IGTAPVHGGTGEVYIVA-ENRVLKVDLLKI 107 (626)
Q Consensus 38 ~~Sspvid~dG~IwIgSd-ggL~a~d~-~G~~~W~~~~~~~~~-------i~~sp~iD~dG~IwVgT-~ggL~~id~~~~ 107 (626)
..++|++ .+|.||+++. ++|+++|. +|+.+|++....... ....+.+ .++.||+++ ++.|+++|..++
T Consensus 60 ~~~~P~v-~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~-~~~~v~~~t~dg~l~AlD~~TG 137 (582)
T 1flg_A 60 QESQAIV-SDGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI-YGDKVFFGTLDASVVALNKNTG 137 (582)
T ss_dssp CCCCCEE-ETTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE-ETTEEEEEETTTEEEEEESSSC
T ss_pred ceeccEE-ECCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE-ECCEEEEEeCCCEEEEEECCCC
Confidence 4588988 7899999985 77999998 999999987643210 1234555 468999998 789999999988
Q ss_pred ccccceeEEEecCCCCCCCCCCeeEEEEEEcCC------eEEEEEc------CCeEEEEeC-CCcEEEEECCccccccc-
Q 006913 108 GTSESATQVFYGTGSGKGGTGAIAGIAVSTSSS------SVYINVK------GRALFAFMT-HGQLLWSAGPVLDQLGY- 173 (626)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG------~LwIgT~------~gGL~a~d~-~G~~~w~~~~~~~~~~~- 173 (626)
+ ..|.+........ ......++. .++ .||+++. ++.|+++|+ +|+++|...........
T Consensus 138 ~-----~~W~~~~~~~~~~-~~~~~sP~v-~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~ 210 (582)
T 1flg_A 138 K-----VVWKKKFADHGAG-YTMTGAPTI-VKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRL 210 (582)
T ss_dssp C-----EEEEEECSCGGGT-CBCCSCCEE-EECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEE
T ss_pred C-----EEeeecCCCCCcC-cccccCCEE-eCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccc
Confidence 6 3565432211000 011112222 234 7888763 577999997 59999975210000000
Q ss_pred ---------ccc----------------cccCCCCCccccceEEEcCCCeEEEEcCC-----------------------
Q 006913 174 ---------RQG----------------CTKTDVDCYFTSVPVIDQCEGSIYISNTQ----------------------- 205 (626)
Q Consensus 174 ---------~~~----------------~~~~l~~~~i~sspviD~~dG~LwIGT~~----------------------- 205 (626)
..+ +.. ..+.....++.+|...+.||+++.+
T Consensus 211 ~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~-~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~ 289 (582)
T 1flg_A 211 NGKDSTVTGDVKAPSWPDDRNSPTGKVESWS-HGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLY 289 (582)
T ss_dssp TTEEEEESSCTTCTTSCBCTTSTTSBCGGGG-GCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTT
T ss_pred cCcccccccccccccCCCccccccccccccc-cCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcc
Confidence 000 000 0011223567888657899998842
Q ss_pred -CeEEEEeCCCCeEEEEEcCCCC-----Ccc-eeeeee---cCC----eEEEEEcCCCEEEEEECCCCcEEEEEecC
Q 006913 206 -GELYSLSAHSPYFNWIQDLSSF-----DKA-FTLTPG---NNG----YLYVTIPVRALVLALDTSSGNILWHKSVG 268 (626)
Q Consensus 206 -GgL~~ld~~tg~~~w~~~~~s~-----~~v-~sI~~D---~dG----~LwVGT~~gG~l~alD~~tG~~~w~~~~~ 268 (626)
+.|+++|+++|+++|.+..... +.. ..+..+ .+| .+++++ ..|.++++|+.+|+++|.....
T Consensus 290 ~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~-~~G~l~~lD~~tG~~lw~~~~~ 365 (582)
T 1flg_A 290 TSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHAD-RNGFFYVVDRSNGKLQNAFPFV 365 (582)
T ss_dssp CSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEEC-TTSEEEEEETTTCCEEEEEESS
T ss_pred cceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEEC-CCceEEEEECCCCCEecccccc
Confidence 5799999999999998754211 111 112223 356 355665 5689999999999999987543
No 23
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.51 E-value=1.8e-11 Score=140.83 Aligned_cols=221 Identities=15% Similarity=0.206 Sum_probs=141.5
Q ss_pred eeeeeEEeeCCEEEEEe-CCcEEEEcC-CCCEEEEEeCCCCC---------CcccCeEEecCCeEEEEE-CCeEEEEECC
Q 006913 38 RLSKPLIGEDGKIYACS-EKTLFAFES-NGTIAWSLDLDFTC---------NIGTAPVHGGTGEVYIVA-ENRVLKVDLL 105 (626)
Q Consensus 38 ~~Sspvid~dG~IwIgS-dggL~a~d~-~G~~~W~~~~~~~~---------~i~~sp~iD~dG~IwVgT-~ggL~~id~~ 105 (626)
+.++|++ .+|.||+++ ++.|+++|. +|+.+|++...... .....+.+ .++.||+++ ++.|+++|..
T Consensus 69 ~~~~P~v-~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~-~~~~v~v~~~dg~l~alD~~ 146 (677)
T 1kb0_A 69 VEATPVV-VDGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL-WKGKVYVGAWDGRLIALDAA 146 (677)
T ss_dssp CCCCCEE-ETTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE-ETTEEEEECTTSEEEEEETT
T ss_pred ceeCCEE-ECCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE-ECCEEEEEcCCCEEEEEECC
Confidence 6789998 789999998 577999998 99999998764310 11234555 468999998 7899999999
Q ss_pred CCccccceeEEEecCC-CCCCCCCCeeEEEEEEcCCeEEEEEc------CCeEEEEeC-CCcEEEEECCccccc--ccc-
Q 006913 106 KIGTSESATQVFYGTG-SGKGGTGAIAGIAVSTSSSSVYINVK------GRALFAFMT-HGQLLWSAGPVLDQL--GYR- 174 (626)
Q Consensus 106 ~~~~~~~~~~~~~~~~-~~~~~~~~~I~s~~~d~dG~LwIgT~------~gGL~a~d~-~G~~~w~~~~~~~~~--~~~- 174 (626)
+++ ..|.+... ... ....+...+...++.||+++. ++.|+++|. +|+++|.+....... ...
T Consensus 147 tG~-----~~W~~~~~~~~~--~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~ 219 (677)
T 1kb0_A 147 TGK-----EVWHQNTFEGQK--GSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFED 219 (677)
T ss_dssp TCC-----EEEEEETTTTCC--SSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSS
T ss_pred CCC-----EEeeecCCcCcC--cCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccc
Confidence 886 35655432 100 011222233345789999875 467999997 599999862210000 000
Q ss_pred ----ccc---c--cC----CCCCccccceEEEcCCCeEEEEcCCC-------------------eEEEEeCCCCeEEEEE
Q 006913 175 ----QGC---T--KT----DVDCYFTSVPVIDQCEGSIYISNTQG-------------------ELYSLSAHSPYFNWIQ 222 (626)
Q Consensus 175 ----~~~---~--~~----l~~~~i~sspviD~~dG~LwIGT~~G-------------------gL~~ld~~tg~~~w~~ 222 (626)
.+. . .. ..+......+.+|...+.||+++.++ .|+++|+++|++.|.+
T Consensus 220 ~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~ 299 (677)
T 1kb0_A 220 ESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHY 299 (677)
T ss_dssp HHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEE
T ss_pred cccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEE
Confidence 000 0 00 00111224567776578899998764 3999999999999987
Q ss_pred cCCCC-----Cccee-eeee--cCC----eEEEEEcCCCEEEEEECCCCcEEEEEecC
Q 006913 223 DLSSF-----DKAFT-LTPG--NNG----YLYVTIPVRALVLALDTSSGNILWHKSVG 268 (626)
Q Consensus 223 ~~~s~-----~~v~s-I~~D--~dG----~LwVGT~~gG~l~alD~~tG~~~w~~~~~ 268 (626)
..... +.... +..+ .+| .|++++ ..|.++++|+.+|+++|.....
T Consensus 300 ~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~-~~G~l~~lD~~tG~~l~~~~~~ 356 (677)
T 1kb0_A 300 QETPGDNWDYTSTQPMILADIKIAGKPRKVILHAP-KNGFFFVLDRTNGKFISAKNFV 356 (677)
T ss_dssp ESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECC-TTSEEEEEETTTCCEEEEEESS
T ss_pred ecCCCcccccccCCCcEEEecccCCcEeeEEEEEC-CCCEEEEEECCCCCEecccccc
Confidence 64311 11111 1122 255 366665 5689999999999999987543
No 24
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.49 E-value=4.9e-11 Score=137.30 Aligned_cols=275 Identities=15% Similarity=0.184 Sum_probs=176.9
Q ss_pred eeeeEEeeCCEEEEEe-CCcEEEEcC-CCCEEEEEeCC-CC---CCcccCeEEecCCeEEEEE-------CCeEEEEECC
Q 006913 39 LSKPLIGEDGKIYACS-EKTLFAFES-NGTIAWSLDLD-FT---CNIGTAPVHGGTGEVYIVA-------ENRVLKVDLL 105 (626)
Q Consensus 39 ~Sspvid~dG~IwIgS-dggL~a~d~-~G~~~W~~~~~-~~---~~i~~sp~iD~dG~IwVgT-------~ggL~~id~~ 105 (626)
..+|.+ .++.||+++ ++.|+++|. +|+.+|++... .. .....+|+++ ++.||+++ ++.|+++|..
T Consensus 121 ~~~~a~-~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~-~~~v~v~~~~~~~~~~g~v~a~D~~ 198 (677)
T 1kb0_A 121 NRGVAL-WKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVF-KGKVIIGNGGAEYGVRGYITAYDAE 198 (677)
T ss_dssp CCCCEE-ETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEE-TTEEEECCBCTTTCCBCEEEEEETT
T ss_pred CCCceE-ECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEE-CCEEEEEecccccCCCCEEEEEECC
Confidence 345666 678999998 678999998 99999998765 21 1244567774 58899986 3679999999
Q ss_pred CCccccceeEEEecCCCCCC--------------------------CCCCeeEEEEEE-cCCeEEEEEcCC---------
Q 006913 106 KIGTSESATQVFYGTGSGKG--------------------------GTGAIAGIAVST-SSSSVYINVKGR--------- 149 (626)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~I~s~~~d-~dG~LwIgT~~g--------- 149 (626)
+++. .|.+....... ........+..+ ..+.||+++.++
T Consensus 199 tG~~-----~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~ 273 (677)
T 1kb0_A 199 TGER-----KWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRS 273 (677)
T ss_dssp TCCE-----EEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHS
T ss_pred CCcE-----EEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCC
Confidence 8863 55543321110 000111223334 467899987643
Q ss_pred ----------eEEEEeCC-CcEEEEECCcccccccccccccCCCCCccccceEE-Ec-CC----CeEEEEcCCCeEEEEe
Q 006913 150 ----------ALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVI-DQ-CE----GSIYISNTQGELYSLS 212 (626)
Q Consensus 150 ----------GL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspvi-D~-~d----G~LwIGT~~GgL~~ld 212 (626)
.|+++|++ |+.+|.+.... +..-+......|++ +. .+ +.|++++.+|.|+++|
T Consensus 274 ~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~----------~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD 343 (677)
T 1kb0_A 274 PKGGDNLYLASIVALDPDTGKYKWHYQETP----------GDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLD 343 (677)
T ss_dssp TTCCCCTTTTEEEEECTTTCCEEEEEESST----------TCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEE
T ss_pred ccCCCCeeeEEEEEEECCCCCEEEEEecCC----------CcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEE
Confidence 39999985 99999862100 00000011233433 20 02 4588898999999999
Q ss_pred CCCCeEEEEEcCCCCC----------------------------------cceeeeeec-CCeEEEEEcC----------
Q 006913 213 AHSPYFNWIQDLSSFD----------------------------------KAFTLTPGN-NGYLYVTIPV---------- 247 (626)
Q Consensus 213 ~~tg~~~w~~~~~s~~----------------------------------~v~sI~~D~-dG~LwVGT~~---------- 247 (626)
.++|++.|........ .-..++.|. .|.+|+++..
T Consensus 344 ~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~ 423 (677)
T 1kb0_A 344 RTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKK 423 (677)
T ss_dssp TTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTT
T ss_pred CCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccc
Confidence 9999999976532100 001234554 4688887531
Q ss_pred --------------------------------CCEEEEEECCCCcEEEEEecCCCCCceeeEEEeeCCeEEEEEcCCeEE
Q 006913 248 --------------------------------RALVLALDTSSGNILWHKSVGPLGSAEYAPVVDSNGWISVGSLDGLLY 295 (626)
Q Consensus 248 --------------------------------gG~l~alD~~tG~~~w~~~~~~l~~~~sspvvD~dG~IWVGT~~gGLy 295 (626)
.+.+.++|..||+++|+...+. .....++...++.+|+|+.++.|+
T Consensus 424 ~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~--~~~~g~~~~~g~~v~~g~~dg~l~ 501 (677)
T 1kb0_A 424 WEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVS--PWNGGTLTTAGNVVFQGTADGRLV 501 (677)
T ss_dssp CCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESS--SCCCCEEEETTTEEEEECTTSEEE
T ss_pred cccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCC--CCcCcceEeCCCEEEEECCCCcEE
Confidence 1679999999999999986652 122334444578999999999999
Q ss_pred EEcC-CCCEEEEeeccCCCCccccCceEEEEEEecCCcEEEEEee
Q 006913 296 SFSP-SGVLNKFSKSDTSDSVIQSSPYWFHLLGPSIGLKAILCLM 339 (626)
Q Consensus 296 ~~d~-~g~~~~~~~~~~~~~~ilssp~V~~Il~DsdG~IwI~T~t 339 (626)
++|. +|+.+|..... .. +...|.++ ..+|..|+.+..
T Consensus 502 a~D~~tG~~lw~~~~~--~~-~~~~p~~y----~~~G~~~v~~~~ 539 (677)
T 1kb0_A 502 AYHAATGEKLWEAPTG--TG-VVAAPSTY----MVDGRQYVSVAV 539 (677)
T ss_dssp EEETTTCCEEEEEECS--SC-CCSCCEEE----EETTEEEEEEEE
T ss_pred EEECCCCceeeeeeCC--CC-cccCCEEE----EeCCEEEEEEec
Confidence 9997 59999976632 11 34455432 357888877654
No 25
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.42 E-value=3.2e-10 Score=114.10 Aligned_cols=233 Identities=10% Similarity=0.100 Sum_probs=152.1
Q ss_pred eeeeEEeeCCEEEEEe--CCcEEEEcCCCCEEEEEeCCCC----CCcccCeEE-ecCCeEEEEE---CCeEEEEECCCCc
Q 006913 39 LSKPLIGEDGKIYACS--EKTLFAFESNGTIAWSLDLDFT----CNIGTAPVH-GGTGEVYIVA---ENRVLKVDLLKIG 108 (626)
Q Consensus 39 ~Sspvid~dG~IwIgS--dggL~a~d~~G~~~W~~~~~~~----~~i~~sp~i-D~dG~IwVgT---~ggL~~id~~~~~ 108 (626)
....+++.+|.||++. ++.|..+|.+|...+.+..... ......+.+ +.+|++|++. ++.|.++++++.
T Consensus 32 p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~g~- 110 (286)
T 1q7f_A 32 PSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQ- 110 (286)
T ss_dssp EEEEEECTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTTSC-
T ss_pred CceEEECCCCCEEEEECCCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEECCCCc-
Confidence 4556677889999985 5689999988887765543110 012334556 4789999997 578999996543
Q ss_pred cccceeEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEc-CCeEEEEeCCCcEEEEECCcccccccccccccCCCCCccc
Q 006913 109 TSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVK-GRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFT 187 (626)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~-~gGL~a~d~~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~ 187 (626)
....+... .......+..+.+|+||++.. ++.|+.++++|+....+.. . .. ....
T Consensus 111 -----~~~~~~~~-----~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~-------~----~~---~~~p 166 (286)
T 1q7f_A 111 -----FVRKFGAT-----ILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFGC-------S----KH---LEFP 166 (286)
T ss_dssp -----EEEEECTT-----TCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEEEC-------T----TT---CSSE
T ss_pred -----EEEEecCc-----cCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCCEEEEeCC-------C----Cc---cCCc
Confidence 12222211 112334556678899999865 4679999988877665411 0 00 0112
Q ss_pred cceEEEcCCCeEEEEcC-CCeEEEEeCCCCeEEEEEcCCC-CCcceeeeeecCCeEEEEEcCCC-EEEEEECCCCcEEEE
Q 006913 188 SVPVIDQCEGSIYISNT-QGELYSLSAHSPYFNWIQDLSS-FDKAFTLTPGNNGYLYVTIPVRA-LVLALDTSSGNILWH 264 (626)
Q Consensus 188 sspviD~~dG~LwIGT~-~GgL~~ld~~tg~~~w~~~~~s-~~~v~sI~~D~dG~LwVGT~~gG-~l~alD~~tG~~~w~ 264 (626)
..+++++ +|+||++.. ++.|+.+|+++. ......... ...+..++.|.+|+|||++..++ .+..+|+ +|+.+..
T Consensus 167 ~~i~~~~-~g~l~v~~~~~~~i~~~~~~g~-~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~ 243 (286)
T 1q7f_A 167 NGVVVND-KQEIFISDNRAHCVKVFNYEGQ-YLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISA 243 (286)
T ss_dssp EEEEECS-SSEEEEEEGGGTEEEEEETTCC-EEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEE
T ss_pred EEEEECC-CCCEEEEECCCCEEEEEcCCCC-EEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEE
Confidence 4467786 899999864 678999998764 433332221 23456788999999999986554 8999984 6776655
Q ss_pred EecCCCCCceeeEEEeeCCeEEEEEcCCeEEEEcC
Q 006913 265 KSVGPLGSAEYAPVVDSNGWISVGSLDGLLYSFSP 299 (626)
Q Consensus 265 ~~~~~l~~~~sspvvD~dG~IWVGT~~gGLy~~d~ 299 (626)
............++++++|++|++..++.|..|+.
T Consensus 244 ~~~~~~~~~~~~i~~~~~g~l~vs~~~~~v~v~~~ 278 (286)
T 1q7f_A 244 LESKVKHAQCFDVALMDDGSVVLASKDYRLYIYRY 278 (286)
T ss_dssp EEESSCCSCEEEEEEETTTEEEEEETTTEEEEEEC
T ss_pred EcccCCCCcceeEEECCCCcEEEECCCCeEEEEEc
Confidence 53331111244678888999999987777777753
No 26
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.41 E-value=3.8e-10 Score=113.57 Aligned_cols=226 Identities=11% Similarity=0.098 Sum_probs=146.0
Q ss_pred cCeEEecCCeEEEEE--CCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEE-EcCCeEEEEEc--CCeEEEEe
Q 006913 81 TAPVHGGTGEVYIVA--ENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVS-TSSSSVYINVK--GRALFAFM 155 (626)
Q Consensus 81 ~sp~iD~dG~IwVgT--~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~-d~dG~LwIgT~--~gGL~a~d 155 (626)
.++.++.+|++|++. ++.|.++++++. ....+...............+.. +.+|+||++.. ++.|..++
T Consensus 33 ~~v~~~~~g~l~v~~~~~~~i~~~d~~g~------~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d 106 (286)
T 1q7f_A 33 SGVAVNAQNDIIVADTNNHRIQIFDKEGR------FKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN 106 (286)
T ss_dssp EEEEECTTCCEEEEEGGGTEEEEECTTSC------EEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC
T ss_pred ceEEECCCCCEEEEECCCCEEEEECCCCc------EEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC
Confidence 356678889999986 688999998753 12222211100000112233344 57899999984 68899999
Q ss_pred CCCcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcC-CCeEEEEeCCCCeEEEEEcC-CCCCcceee
Q 006913 156 THGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNT-QGELYSLSAHSPYFNWIQDL-SSFDKAFTL 233 (626)
Q Consensus 156 ~~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~-~GgL~~ld~~tg~~~w~~~~-~s~~~v~sI 233 (626)
++|+....+.. . . ......+.+++ +|+||++.. ++.|+++++++ +..+.... .....+..+
T Consensus 107 ~~g~~~~~~~~-----~-------~---~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~g-~~~~~~~~~~~~~~p~~i 169 (286)
T 1q7f_A 107 QYGQFVRKFGA-----T-------I---LQHPRGVTVDN-KGRIIVVECKVMRVIIFDQNG-NVLHKFGCSKHLEFPNGV 169 (286)
T ss_dssp TTSCEEEEECT-----T-------T---CSCEEEEEECT-TSCEEEEETTTTEEEEECTTS-CEEEEEECTTTCSSEEEE
T ss_pred CCCcEEEEecC-----c-------c---CCCceEEEEeC-CCCEEEEECCCCEEEEEcCCC-CEEEEeCCCCccCCcEEE
Confidence 88887665411 0 0 00123466776 889999864 57899999876 44443322 223346678
Q ss_pred eeecCCeEEEEEcCCCEEEEEECCCCcEEEEEecCCCCCceeeEEEeeCCeEEEEEcCC--eEEEEcCCCCEEEEeeccC
Q 006913 234 TPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPVVDSNGWISVGSLDG--LLYSFSPSGVLNKFSKSDT 311 (626)
Q Consensus 234 ~~D~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~~~sspvvD~dG~IWVGT~~g--GLy~~d~~g~~~~~~~~~~ 311 (626)
+.+.+|+||++....+.+..+|. +|+................+++|++|+||+++..+ .|.+|+++++........
T Consensus 170 ~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~~- 247 (286)
T 1q7f_A 170 VVNDKQEIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALESK- 247 (286)
T ss_dssp EECSSSEEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSCEEEEEEES-
T ss_pred EECCCCCEEEEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCCEEEEEccc-
Confidence 89999999999865678999996 56666554322101234568889999999998643 899999988766544311
Q ss_pred CCCccccCceEEEEEEecCCcEEEE
Q 006913 312 SDSVIQSSPYWFHLLGPSIGLKAIL 336 (626)
Q Consensus 312 ~~~~ilssp~V~~Il~DsdG~IwI~ 336 (626)
...+....+..+.+|++|+.
T Consensus 248 -----~~~~~~~~i~~~~~g~l~vs 267 (286)
T 1q7f_A 248 -----VKHAQCFDVALMDDGSVVLA 267 (286)
T ss_dssp -----SCCSCEEEEEEETTTEEEEE
T ss_pred -----CCCCcceeEEECCCCcEEEE
Confidence 11223457888899999865
No 27
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.38 E-value=1.7e-10 Score=116.95 Aligned_cols=235 Identities=10% Similarity=0.084 Sum_probs=148.1
Q ss_pred ceeeeeEEeeCCEEEEE--------e-CCcEEEEcC-CCCEEEEEeCC---CCCCcccCeEEecC-CeEEEEE-CCeEEE
Q 006913 37 FRLSKPLIGEDGKIYAC--------S-EKTLFAFES-NGTIAWSLDLD---FTCNIGTAPVHGGT-GEVYIVA-ENRVLK 101 (626)
Q Consensus 37 ~~~Sspvid~dG~IwIg--------S-dggL~a~d~-~G~~~W~~~~~---~~~~i~~sp~iD~d-G~IwVgT-~ggL~~ 101 (626)
.....++.+.+|.||++ + +++|++++. +|++.. +..+ ........+.++.+ |++|+++ .++|++
T Consensus 18 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~l~~ 96 (314)
T 1pjx_A 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTV-ICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLV 96 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEE-EECCEETTEECCEEEEEECSSSSEEEEEETTTEEEE
T ss_pred CCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEE-EEecccCCCCCCCceEEEecCCCcEEEEECCCCEEE
Confidence 34467888889999998 4 568999996 777642 2221 00112345677888 9999998 579999
Q ss_pred EECCCCccccceeEEE-ecCCCCCCCCCCeeEEEEEEcCCeEEEEEcC----------------CeEEEEeCCCcEEEEE
Q 006913 102 VDLLKIGTSESATQVF-YGTGSGKGGTGAIAGIAVSTSSSSVYINVKG----------------RALFAFMTHGQLLWSA 164 (626)
Q Consensus 102 id~~~~~~~~~~~~~~-~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~~----------------gGL~a~d~~G~~~w~~ 164 (626)
++++ +.. ... .... .......+..+..+.+|+||+++.. ++|++++++|+.....
T Consensus 97 ~d~~-g~~-----~~~~~~~~--~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~ 168 (314)
T 1pjx_A 97 VQTD-GTF-----EEIAKKDS--EGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQMIQVD 168 (314)
T ss_dssp EETT-SCE-----EECCSBCT--TSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTSCEEEEE
T ss_pred EeCC-CCE-----EEEEeccC--CCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCCCCEEEec
Confidence 9988 531 211 1110 0111123445667889999999864 4799999877654321
Q ss_pred CCcccccccccccccCCCCCccccceEEE----cCCC-eEEEEc-CCCeEEEEeCC-CCeEEEE---EcCCC-C-Cccee
Q 006913 165 GPVLDQLGYRQGCTKTDVDCYFTSVPVID----QCEG-SIYISN-TQGELYSLSAH-SPYFNWI---QDLSS-F-DKAFT 232 (626)
Q Consensus 165 ~~~~~~~~~~~~~~~~l~~~~i~sspviD----~~dG-~LwIGT-~~GgL~~ld~~-tg~~~w~---~~~~s-~-~~v~s 232 (626)
. ... ....++++ + ++ .||++. .+++|++++.+ ++.+... ..... . ..+..
T Consensus 169 ~----~~~-------------~~~~i~~~~~~d~-dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~ 230 (314)
T 1pjx_A 169 T----AFQ-------------FPNGIAVRHMNDG-RPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADG 230 (314)
T ss_dssp E----EES-------------SEEEEEEEECTTS-CEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEE
T ss_pred c----CCC-------------CcceEEEecccCC-CCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCc
Confidence 0 000 01223445 5 55 689885 46789999875 4443211 12211 1 33556
Q ss_pred eeeecCCeEEEEEcCCCEEEEEECCCCcEEEEEecCCCCCceeeEEEeeCCe-EEEEEc-CCeEEEEcCC
Q 006913 233 LTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPVVDSNGW-ISVGSL-DGLLYSFSPS 300 (626)
Q Consensus 233 I~~D~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~~~sspvvD~dG~-IWVGT~-~gGLy~~d~~ 300 (626)
++.|.+|+||+++..++.+..+|+.+|+........ ......+.++++|. ||+++. +++|++++.+
T Consensus 231 i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~--~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~ 298 (314)
T 1pjx_A 231 MDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCP--FEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp EEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECS--SSCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred eEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCC--CCCceeEEECCCCCEEEEEeCCCCeEEEEeCC
Confidence 788999999999865678999998777765444333 12345677787887 999985 3689999864
No 28
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.32 E-value=2.6e-10 Score=113.30 Aligned_cols=229 Identities=14% Similarity=0.108 Sum_probs=141.6
Q ss_pred cCeEEecCCeEEE-EE--CCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEcCCeEEEEeCC
Q 006913 81 TAPVHGGTGEVYI-VA--ENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTH 157 (626)
Q Consensus 81 ~sp~iD~dG~IwV-gT--~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~~gGL~a~d~~ 157 (626)
.++.+|.+|++|+ +. +++|+++++.+.. ...+... .......+..+.+|+||++..+++|+.++++
T Consensus 27 ~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~------~~~~~~~-----~~~~p~~i~~~~~g~l~v~~~~~~i~~~d~~ 95 (270)
T 1rwi_B 27 SGVAVDSAGNVYVTSEGMYGRVVKLATGSTG------TTVLPFN-----GLYQPQGLAVDGAGTVYVTDFNNRVVTLAAG 95 (270)
T ss_dssp EEEEECTTCCEEEEECSSSCEEEEECC-----------EECCCC-----SCCSCCCEEECTTCCEEEEETTTEEEEECTT
T ss_pred cceEECCCCCEEEEccCCCCcEEEecCCCcc------cceEeeC-----CcCCcceeEECCCCCEEEEcCCCEEEEEeCC
Confidence 3567788999999 73 5889999876642 1111110 0112233456778899999877789999987
Q ss_pred CcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcC-CCeEEEEeCCCCeEEEEEcCCCCCcceeeeee
Q 006913 158 GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNT-QGELYSLSAHSPYFNWIQDLSSFDKAFTLTPG 236 (626)
Q Consensus 158 G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~-~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D 236 (626)
+........ . .. .....+++++ +|+||++.. ++.|++++..+...... .......+..++.+
T Consensus 96 ~~~~~~~~~-----~-------~~---~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~~~~~~~~-~~~~~~~p~~i~~~ 158 (270)
T 1rwi_B 96 SNNQTVLPF-----D-------GL---NYPEGLAVDT-QGAVYVADRGNNRVVKLAAGSKTQTVL-PFTGLNDPDGVAVD 158 (270)
T ss_dssp CSCCEECCC-----C-------SC---SSEEEEEECT-TCCEEEEEGGGTEEEEECTTCCSCEEC-CCCSCCSCCCEEEC
T ss_pred CceEeeeec-----C-------Cc---CCCcceEECC-CCCEEEEECCCCEEEEEECCCceeEee-ccccCCCceeEEEe
Confidence 654443200 0 00 0123467776 889999864 56899997766443322 11122345567888
Q ss_pred cCCeEEEEEcCCCEEEEEECCCCcEEEEEecCCCCCceeeEEEeeCCeEEEEEc-CCeEEEEcCCCCEEEEeeccCCCCc
Q 006913 237 NNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPVVDSNGWISVGSL-DGLLYSFSPSGVLNKFSKSDTSDSV 315 (626)
Q Consensus 237 ~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~~~sspvvD~dG~IWVGT~-~gGLy~~d~~g~~~~~~~~~~~~~~ 315 (626)
.+|+||+++..++.++.+|..++.... .....+ .....+++|++|+||+++. ++.|+++++++....... ...
T Consensus 159 ~~g~l~v~~~~~~~i~~~~~~~~~~~~-~~~~~~-~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~---~~~- 232 (270)
T 1rwi_B 159 NSGNVYVTDTDNNRVVKLEAESNNQVV-LPFTDI-TAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLP---FTG- 232 (270)
T ss_dssp TTCCEEEEEGGGTEEEEECTTTCCEEE-CCCSSC-CSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECC---CCS-
T ss_pred CCCCEEEEECCCCEEEEEecCCCceEe-ecccCC-CCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeec---cCC-
Confidence 899999998666789999976655432 211211 2345678898999999986 568999998765433321 111
Q ss_pred cccCceEEEEEEecCCcEEEEEeeecCeeEEe
Q 006913 316 IQSSPYWFHLLGPSIGLKAILCLMVVGQFSSL 347 (626)
Q Consensus 316 ilssp~V~~Il~DsdG~IwI~T~t~~Ggl~~~ 347 (626)
...+..|..+.+|+||+.. ...+.+..+
T Consensus 233 ---~~~p~~i~~~~~g~l~v~~-~~~~~v~~~ 260 (270)
T 1rwi_B 233 ---LNTPLAVAVDSDRTVYVAD-RGNDRVVKL 260 (270)
T ss_dssp ---CSCEEEEEECTTCCEEEEE-GGGTEEEEE
T ss_pred ---CCCceeEEECCCCCEEEEE-CCCCEEEEE
Confidence 1345678889999998643 334555443
No 29
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.30 E-value=6.7e-10 Score=112.59 Aligned_cols=236 Identities=14% Similarity=0.115 Sum_probs=142.6
Q ss_pred ccCeEEecCCeEEEE--------E-CCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEcC-CeEEEEEcCC
Q 006913 80 GTAPVHGGTGEVYIV--------A-ENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSS-SSVYINVKGR 149 (626)
Q Consensus 80 ~~sp~iD~dG~IwVg--------T-~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~d-G~LwIgT~~g 149 (626)
..++..|.+|++|++ + +++|+++++.++.. ..+.... .......+..+..+.+ |+||+++..+
T Consensus 20 ~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~----~~~~~~~---~~~~~~~~~~i~~~~~~g~l~v~~~~~ 92 (314)
T 1pjx_A 20 AEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKK----TVICKPE---VNGYGGIPAGCQCDRDANQLFVADMRL 92 (314)
T ss_dssp CEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCE----EEEECCE---ETTEECCEEEEEECSSSSEEEEEETTT
T ss_pred ccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcE----EEEEecc---cCCCCCCCceEEEecCCCcEEEEECCC
Confidence 346777889999998 4 68899999776642 1111100 0000122344556777 9999999878
Q ss_pred eEEEEeCCCcEEEE-ECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcCC----------------CeEEEEe
Q 006913 150 ALFAFMTHGQLLWS-AGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQ----------------GELYSLS 212 (626)
Q Consensus 150 GL~a~d~~G~~~w~-~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~~----------------GgL~~ld 212 (626)
+|+.+|++|+.... ... . .... ......+++|+ +|+||+++.. ++|++++
T Consensus 93 ~l~~~d~~g~~~~~~~~~-------~----~~~~-~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~ 159 (314)
T 1pjx_A 93 GLLVVQTDGTFEEIAKKD-------S----EGRR-MQGCNDCAFDY-EGNLWITAPAGEVAPADYTRSMQEKFGSIYCFT 159 (314)
T ss_dssp EEEEEETTSCEEECCSBC-------T----TSCB-CBCCCEEEECT-TSCEEEEECBCBCTTSCCCBTTSSSCEEEEEEC
T ss_pred CEEEEeCCCCEEEEEecc-------C----CCcc-ccCCcCEEECC-CCCEEEEecCcccccccccccccCCCCeEEEEC
Confidence 99999987765432 100 0 0000 01124467786 8999999863 5899999
Q ss_pred CCCCeEEEEEcCCCCCcceeeeee----cCC-eEEEEEcCCCEEEEEECC-CCcEEEE---EecCCCC-CceeeEEEeeC
Q 006913 213 AHSPYFNWIQDLSSFDKAFTLTPG----NNG-YLYVTIPVRALVLALDTS-SGNILWH---KSVGPLG-SAEYAPVVDSN 282 (626)
Q Consensus 213 ~~tg~~~w~~~~~s~~~v~sI~~D----~dG-~LwVGT~~gG~l~alD~~-tG~~~w~---~~~~~l~-~~~sspvvD~d 282 (626)
++ +++...... ......++.+ .+| .||++....+.++.+|.. +|..... ....... .....+++|++
T Consensus 160 ~~-g~~~~~~~~--~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~ 236 (314)
T 1pjx_A 160 TD-GQMIQVDTA--FQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDED 236 (314)
T ss_dssp TT-SCEEEEEEE--ESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTT
T ss_pred CC-CCEEEeccC--CCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCC
Confidence 87 565443221 1122345555 788 699987556788888754 4543211 1111111 23456788999
Q ss_pred CeEEEEEc-CCeEEEEcCC-CCEEEEeeccCCCCccccCceEEEEEEecCCc-EEEEEeeecCeeEEe
Q 006913 283 GWISVGSL-DGLLYSFSPS-GVLNKFSKSDTSDSVIQSSPYWFHLLGPSIGL-KAILCLMVVGQFSSL 347 (626)
Q Consensus 283 G~IWVGT~-~gGLy~~d~~-g~~~~~~~~~~~~~~ilssp~V~~Il~DsdG~-IwI~T~t~~Ggl~~~ 347 (626)
|++|+++. +++|++++++ ++...... .+...+.++..+.+|+ ||+.+.. .+++..+
T Consensus 237 G~l~v~~~~~~~i~~~d~~~g~~~~~~~--------~~~~~~~~i~~~~dg~~l~v~~~~-~~~l~~~ 295 (314)
T 1pjx_A 237 NNLLVANWGSSHIEVFGPDGGQPKMRIR--------CPFEKPSNLHFKPQTKTIFVTEHE-NNAVWKF 295 (314)
T ss_dssp CCEEEEEETTTEEEEECTTCBSCSEEEE--------CSSSCEEEEEECTTSSEEEEEETT-TTEEEEE
T ss_pred CCEEEEEcCCCEEEEEcCCCCcEeEEEe--------CCCCCceeEEECCCCCEEEEEeCC-CCeEEEE
Confidence 99999974 6789999987 66443322 1223456777788898 8865532 3455443
No 30
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.27 E-value=3.9e-12 Score=135.45 Aligned_cols=229 Identities=14% Similarity=0.186 Sum_probs=129.1
Q ss_pred eeeeEEeeCCEEEEEe-CCcEEEEcC-CCCEEEEEeCCCCCCcccCeEEecCCeEEEE-E-CCeEEEEECCCCcccccee
Q 006913 39 LSKPLIGEDGKIYACS-EKTLFAFES-NGTIAWSLDLDFTCNIGTAPVHGGTGEVYIV-A-ENRVLKVDLLKIGTSESAT 114 (626)
Q Consensus 39 ~Sspvid~dG~IwIgS-dggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~dG~IwVg-T-~ggL~~id~~~~~~~~~~~ 114 (626)
.++|++ .++.||+++ ++.|+++|. +|+.+|.+.. . .+..+|+.+ +|.++++ + ++.|+++|..+++.
T Consensus 2 ~ssP~v-~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-~--~~~s~p~~~-~g~~~v~~s~dg~l~a~d~~tG~~----- 71 (369)
T 2hz6_A 2 SSTVTL-PETLLFVSTLDGSLHAVSKRTGSIKWTLKE-D--PVLQVPTHV-EEPAFLPDPNDGSLYTLGSKNNEG----- 71 (369)
T ss_dssp -------CTTEEEEEETTSEEEEEETTTCCEEEEEEC-C--CSCCCC------CCEEECTTTCCEEEC-----CC-----
T ss_pred CCCCee-eCCEEEEEcCCCEEEEEECCCCCEEEEecC-C--CceecceEc-CCCEEEEeCCCCEEEEEECCCCce-----
Confidence 478888 678999998 678999997 9999999876 2 345566663 4666766 4 78999999977642
Q ss_pred EEEecCCCCCCCCCCee-EEEEEEcCCeEEEEEcCCeEEEEeCC-CcEEEEECCcccccccccccccCCCCCccccceEE
Q 006913 115 QVFYGTGSGKGGTGAIA-GIAVSTSSSSVYINVKGRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVI 192 (626)
Q Consensus 115 ~~~~~~~~~~~~~~~~I-~s~~~d~dG~LwIgT~~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspvi 192 (626)
.|.+.... ...+ ..++...++.||+++.++.|+++|+. |+.+|.+.. + . ....+|
T Consensus 72 ~w~~~~~~-----~~~~~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~-----~------~-----~~~~~p-- 128 (369)
T 2hz6_A 72 LTKLPFTI-----PELVQASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSS-----A------F-----ADSLSP-- 128 (369)
T ss_dssp SEECSCCH-----HHHHTTCSCC-----CCCCEEEEEEEEECCC------------------------------------
T ss_pred eeeeeccC-----ccccccCceEecCCEEEEEeCCCEEEEEECCCCcEEEEecC-----C------C-----cccccc--
Confidence 34332110 0011 11122246789998888889999985 999997511 0 0 011223
Q ss_pred EcCCCeEEEEcCCCeEEEEeCCCCeEEEEEcCCCCCcceeeeeec----CCeEEEEEcCCCEEEEEECCCCcEEEEEecC
Q 006913 193 DQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGN----NGYLYVTIPVRALVLALDTSSGNILWHKSVG 268 (626)
Q Consensus 193 D~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~----dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~ 268 (626)
+ ++.||+++.++.|+++|.++|+..|....... ..+..+. ++.+|+++. ++.++++|..+|+.+|.....
T Consensus 129 ~--~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~~---~~~~~~~~~~~~~~v~~~~~-dg~v~a~d~~tG~~~W~~~~~ 202 (369)
T 2hz6_A 129 S--TSLLYLGRTEYTITMYDTKTRELRWNATYFDY---AASLPEDDVDYKMSHFVSNG-DGLVVTVDSESGDVLWIQNYA 202 (369)
T ss_dssp ------EEEEEEEEEEECCCSSSSSCCCEEEEEEE---CCBCCCCCTTCCCCEEEEET-SCEEEEECTTTCCEEEEEECS
T ss_pred c--CCEEEEEecCCEEEEEECCCCCEEEeEecccc---cCccccCCccccceEEEECC-CCEEEEEECCCCcEEEEecCC
Confidence 3 78999999889999999999999998643211 1122222 378999885 579999999999999988755
Q ss_pred CCCCceeeEEEeeCCeEEEEE---cCCeEEEEcC-CCC----EEEEee
Q 006913 269 PLGSAEYAPVVDSNGWISVGS---LDGLLYSFSP-SGV----LNKFSK 308 (626)
Q Consensus 269 ~l~~~~sspvvD~dG~IWVGT---~~gGLy~~d~-~g~----~~~~~~ 308 (626)
. .....++...+|.+|+.. .++.++++|. +|+ ..|...
T Consensus 203 ~--pv~~~~~~~~dg~~~v~~~~~~~~~l~~ld~~tG~~~~~~~W~~~ 248 (369)
T 2hz6_A 203 S--PVVAFYVWQREGLRKVMHINVAVETLRYLTFMSGEVGRITKWKYP 248 (369)
T ss_dssp S--CEEEEEECTTSSCEEECCEEEEHHHHHHHHHHHHHHHHHHTSCCC
T ss_pred C--ceEEEEEecCCceEeccceeecccceeeeehhcCCcccceeeeec
Confidence 2 233445555677776432 1346788886 477 777544
No 31
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.27 E-value=1.4e-09 Score=107.82 Aligned_cols=231 Identities=15% Similarity=0.142 Sum_probs=143.9
Q ss_pred eeeeeEEeeCCEEEE-Ee--CCcEEEEcCCCCEEEEEeCCCCCCcccCeEEecCCeEEEEE-CCeEEEEECCCCccccce
Q 006913 38 RLSKPLIGEDGKIYA-CS--EKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVA-ENRVLKVDLLKIGTSESA 113 (626)
Q Consensus 38 ~~Sspvid~dG~IwI-gS--dggL~a~d~~G~~~W~~~~~~~~~i~~sp~iD~dG~IwVgT-~ggL~~id~~~~~~~~~~ 113 (626)
.-..++++.+|+||+ +. +++|++++..+...+...... ......+.+|.+|++|++. +++|+++++.+...
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~p~~i~~~~~g~l~v~~~~~~i~~~d~~~~~~---- 99 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNG-LYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQ---- 99 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCS-CCSCCCEEECTTCCEEEEETTTEEEEECTTCSCC----
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCC-cCCcceeEECCCCCEEEEcCCCEEEEEeCCCceE----
Confidence 445667778999999 63 568999997443332222211 1234567888899999998 78999999877521
Q ss_pred eEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEc-CCeEEEEeCC-CcEEEEECCcccccccccccccCCCCCccccceE
Q 006913 114 TQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVK-GRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPV 191 (626)
Q Consensus 114 ~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~-~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspv 191 (626)
..+.. ........+..+.+|+||++.. ++.|+.++.. ....... .. . ......++
T Consensus 100 --~~~~~-----~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~---------~~----~---~~~p~~i~ 156 (270)
T 1rwi_B 100 --TVLPF-----DGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLP---------FT----G---LNDPDGVA 156 (270)
T ss_dssp --EECCC-----CSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECC---------CC----S---CCSCCCEE
T ss_pred --eeeec-----CCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeec---------cc----c---CCCceeEE
Confidence 11111 0112334556677899999864 4678899764 3222110 00 0 00123467
Q ss_pred EEcCCCeEEEEcC-CCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCCeEEEEEcCCCEEEEEECCCCcEEEEEecCCC
Q 006913 192 IDQCEGSIYISNT-QGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPL 270 (626)
Q Consensus 192 iD~~dG~LwIGT~-~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l 270 (626)
+++ +|+||+++. ++.|+.++.+++..... .......+..++.|.+|+||+++..++.+..+++.+... .......+
T Consensus 157 ~~~-~g~l~v~~~~~~~i~~~~~~~~~~~~~-~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~-~~~~~~~~ 233 (270)
T 1rwi_B 157 VDN-SGNVYVTDTDNNRVVKLEAESNNQVVL-PFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTS-TVLPFTGL 233 (270)
T ss_dssp ECT-TCCEEEEEGGGTEEEEECTTTCCEEEC-CCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCC-EECCCCSC
T ss_pred EeC-CCCEEEEECCCCEEEEEecCCCceEee-cccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcc-eeeccCCC
Confidence 785 789999875 56899999988654332 211223456788999999999987667888898754432 22222211
Q ss_pred CCceeeEEEeeCCeEEEEEc-CCeEEEEcCC
Q 006913 271 GSAEYAPVVDSNGWISVGSL-DGLLYSFSPS 300 (626)
Q Consensus 271 ~~~~sspvvD~dG~IWVGT~-~gGLy~~d~~ 300 (626)
.....++++++|+||++.. ++.|..|+..
T Consensus 234 -~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~ 263 (270)
T 1rwi_B 234 -NTPLAVAVDSDRTVYVADRGNDRVVKLTSL 263 (270)
T ss_dssp -SCEEEEEECTTCCEEEEEGGGTEEEEECCC
T ss_pred -CCceeEEECCCCCEEEEECCCCEEEEEcCC
Confidence 2345678888999999975 4577777653
No 32
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=99.27 E-value=3.2e-09 Score=120.46 Aligned_cols=245 Identities=13% Similarity=0.100 Sum_probs=147.7
Q ss_pred ceeeeeEEeeCCEEEEEe-------CCcEEEEcC-CCCEEEEEeCCCCC-------------------------------
Q 006913 37 FRLSKPLIGEDGKIYACS-------EKTLFAFES-NGTIAWSLDLDFTC------------------------------- 77 (626)
Q Consensus 37 ~~~Sspvid~dG~IwIgS-------dggL~a~d~-~G~~~W~~~~~~~~------------------------------- 77 (626)
.+.++|++ .+|.|++++ ++.|+++|. +|+.+|.+......
T Consensus 157 ~~~ssP~v-~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~ 235 (599)
T 1w6s_A 157 TLTIAPYV-VKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAW 235 (599)
T ss_dssp BCCSCCEE-ETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGG
T ss_pred eeecCCEE-ECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcce
Confidence 56788988 678999986 467999998 89999998764210
Q ss_pred -----CcccCeEEe-cCCeEEEEEC-----------------CeEEEEECCCCccccceeEEEecCCCCCCCCCCeeE-E
Q 006913 78 -----NIGTAPVHG-GTGEVYIVAE-----------------NRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAG-I 133 (626)
Q Consensus 78 -----~i~~sp~iD-~dG~IwVgT~-----------------ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~-s 133 (626)
.....+..| ..+.||+++. +.|+++|+.+++ ..|.+.........-.... .
T Consensus 236 ~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~-----~~W~~q~~~~d~wd~d~~~~p 310 (599)
T 1w6s_A 236 KIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGE-----AKFGYQKTPHDEWDYAGVNVM 310 (599)
T ss_dssp GGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCC-----EEEEEESSTTCSSCCCCCCCC
T ss_pred ecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCc-----eeeEeecCCCccccccCCCcc
Confidence 011234555 4578999983 279999999986 4666543321110000011 1
Q ss_pred EEEE---cCC---e-EEEEEcCCeEEEEeC-CCcEEEEECCc--cc---ccccc-------------------cccccCC
Q 006913 134 AVST---SSS---S-VYINVKGRALFAFMT-HGQLLWSAGPV--LD---QLGYR-------------------QGCTKTD 181 (626)
Q Consensus 134 ~~~d---~dG---~-LwIgT~~gGL~a~d~-~G~~~w~~~~~--~~---~~~~~-------------------~~~~~~l 181 (626)
++.+ .+| . ++.++.++.|+++|. +|+++|..... .+ ..... ..|+...
T Consensus 311 ~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~ 390 (599)
T 1w6s_A 311 MLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAM 390 (599)
T ss_dssp EEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTT
T ss_pred EEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcc
Confidence 1222 456 3 555777888999997 59999975210 00 00000 0011111
Q ss_pred CCCccccceEEEcCCCeEEEEc---------------------------------------CCCeEEEEeCCCCeEEEEE
Q 006913 182 VDCYFTSVPVIDQCEGSIYISN---------------------------------------TQGELYSLSAHSPYFNWIQ 222 (626)
Q Consensus 182 ~~~~i~sspviD~~dG~LwIGT---------------------------------------~~GgL~~ld~~tg~~~w~~ 222 (626)
...+ ...+.+|+..+.+|+.. ..|.|+++|+.+|++.|..
T Consensus 391 Gg~~-w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~ 469 (599)
T 1w6s_A 391 GYHN-QGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEK 469 (599)
T ss_dssp CSSC-SCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEE
T ss_pred cccC-CCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEe
Confidence 1111 12344554334444421 3478999999999999987
Q ss_pred cCCCCCcceeeeeecCCeEEEEEcCCCEEEEEECCCCcEEEEEecCCCCCceeeEEE-eeCCeEEEEEcCC
Q 006913 223 DLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPVV-DSNGWISVGSLDG 292 (626)
Q Consensus 223 ~~~s~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~~~sspvv-D~dG~IWVGT~~g 292 (626)
..... ..........|.+|+++. .+.++++|.+||+.+|.+..+. .....|+. ..+|++||+...|
T Consensus 470 ~~~~~-~~~g~~~tagg~vf~gt~-dg~l~A~D~~tG~~lW~~~l~~--g~~~~P~~y~~~G~qyv~~~~G 536 (599)
T 1w6s_A 470 MERFA-VWGGTMATAGDLVFYGTL-DGYLKARDSDTGDLLWKFKIPS--GAIGYPMTYTHKGTQYVAIYYG 536 (599)
T ss_dssp EESSC-CCSBCEEETTTEEEEECT-TSEEEEEETTTCCEEEEEECSS--CCCSCCEEEEETTEEEEEEEEC
T ss_pred cCCCC-ccCcceEecCCEEEEECC-CCeEEEEECCCCCEEEEeeCCC--CcEeccEEEEeCCEEEEEEEcc
Confidence 54321 111222335789999985 5799999999999999987662 22333433 3489999987544
No 33
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.25 E-value=1.4e-09 Score=124.90 Aligned_cols=225 Identities=21% Similarity=0.298 Sum_probs=146.2
Q ss_pred CCCEEEEEeCCCCCCcccCeEEecCCeEEEEE-CCeEEEEECCCCccccceeEEEecCCCCCC----CCCCeeEEEEEEc
Q 006913 64 NGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVA-ENRVLKVDLLKIGTSESATQVFYGTGSGKG----GTGAIAGIAVSTS 138 (626)
Q Consensus 64 ~G~~~W~~~~~~~~~i~~sp~iD~dG~IwVgT-~ggL~~id~~~~~~~~~~~~~~~~~~~~~~----~~~~~I~s~~~d~ 138 (626)
+++..|++.++.......+|++ .+|.||+++ ++.|+++|..+++ ..|.+....... .....+...+...
T Consensus 43 ~l~~~W~~~~~~~~~~~~~P~v-~~g~vyv~~~~~~v~AlD~~tG~-----~~W~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (668)
T 1kv9_A 43 SLGLAWYMDLDNTRGLEATPLF-HDGVIYTSMSWSRVIAVDAASGK-----ELWRYDPEVAKVKARTSCCDAVNRGVALW 116 (668)
T ss_dssp GEEEEEEEECSCCSCCCCCCEE-ETTEEEEEEGGGEEEEEETTTCC-----EEEEECCCCCGGGGGGCTTCSCCCCCEEE
T ss_pred CcceEEEEECCCCCCcccCCEE-ECCEEEEECCCCeEEEEECCCCh-----hceEECCCCCccccccccccCCccceEEE
Confidence 4567898887542224567877 468999998 7889999999886 467664321100 0001111122335
Q ss_pred CCeEEEEEcCCeEEEEeC-CCcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcC------CCeEEEE
Q 006913 139 SSSVYINVKGRALFAFMT-HGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNT------QGELYSL 211 (626)
Q Consensus 139 dG~LwIgT~~gGL~a~d~-~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~------~GgL~~l 211 (626)
++.||+++.++.|+++|. +|+.+|.+.. . . .. ....+..+|++. ++.||+++. +|.|+++
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~-----~--~--~~--~~~~~~~~P~v~--~~~v~vg~~~~~~~~~g~v~a~ 183 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQT-----T--D--PA--KPYSITGAPRVV--KGKVIIGNGGAEYGVRGFVSAY 183 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEEC-----S--C--TT--SSCBCCSCCEEE--TTEEEECCBCTTTCCBCEEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeecc-----C--C--CC--CcceecCCCEEE--CCEEEEeCCCCCcCCCCEEEEE
Confidence 789999998899999997 5999998621 0 0 00 011234567887 789999875 3789999
Q ss_pred eCCCCeEEEEEcCC-C--CC---------------------------cceeeeeec-CCeEEEEEcCC------------
Q 006913 212 SAHSPYFNWIQDLS-S--FD---------------------------KAFTLTPGN-NGYLYVTIPVR------------ 248 (626)
Q Consensus 212 d~~tg~~~w~~~~~-s--~~---------------------------~v~sI~~D~-dG~LwVGT~~g------------ 248 (626)
|.++|+..|..... . .. ....++.|. .+.+|+++.++
T Consensus 184 D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~ 263 (668)
T 1kv9_A 184 DADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGG 263 (668)
T ss_dssp ETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTC
T ss_pred ECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCC
Confidence 99999999986531 1 00 001245553 57999997432
Q ss_pred ------CEEEEEECCCCcEEEEEecCCCCC----ceeeEEE---eeCCe----EEEEEcCCeEEEEcC-CCCEEEEe
Q 006913 249 ------ALVLALDTSSGNILWHKSVGPLGS----AEYAPVV---DSNGW----ISVGSLDGLLYSFSP-SGVLNKFS 307 (626)
Q Consensus 249 ------G~l~alD~~tG~~~w~~~~~~l~~----~~sspvv---D~dG~----IWVGT~~gGLy~~d~-~g~~~~~~ 307 (626)
+.++++|+.||+.+|.+...+... ....++. ..+|. |++++.+|.||++|. +|+++|..
T Consensus 264 gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~ 340 (668)
T 1kv9_A 264 GDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAE 340 (668)
T ss_dssp CCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEE
T ss_pred CCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccc
Confidence 149999999999999987642110 0011111 12564 889999999999997 48888643
No 34
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.24 E-value=2.7e-09 Score=108.25 Aligned_cols=233 Identities=9% Similarity=0.020 Sum_probs=141.8
Q ss_pred cCCceeeeeEEeeCCE--EEEEe-CCcEEEEcCCCCEEEEEeCCCCCCcccCeEEecCCeEEEEE--CCeEEEEECCCCc
Q 006913 34 RSAFRLSKPLIGEDGK--IYACS-EKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVA--ENRVLKVDLLKIG 108 (626)
Q Consensus 34 ~~~~~~Sspvid~dG~--IwIgS-dggL~a~d~~G~~~W~~~~~~~~~i~~sp~iD~dG~IwVgT--~ggL~~id~~~~~ 108 (626)
.......+|+.+.+|+ +|+++ +++|++++..+... .+.... ....++.++.+|++|+++ +++|+.+|+.++.
T Consensus 25 ~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~~~-~~~~~~--~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~ 101 (296)
T 3e5z_A 25 DGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQLS-PEMHPS--HHQNGHCLNKQGHLIACSHGLRRLERQREPGGE 101 (296)
T ss_dssp CCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSCEE-EEESSC--SSEEEEEECTTCCEEEEETTTTEEEEECSTTCC
T ss_pred cCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCCeE-EEECCC--CCcceeeECCCCcEEEEecCCCeEEEEcCCCCc
Confidence 3455667899988886 55565 57899999844432 233222 234567788999999998 4799999996654
Q ss_pred cccceeEEEecCCCCCCCCCCeeEEEEEEcCCeEEEE-----Ec-------------CCeEEEEeCCCcEEEEECCcccc
Q 006913 109 TSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYIN-----VK-------------GRALFAFMTHGQLLWSAGPVLDQ 170 (626)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIg-----T~-------------~gGL~a~d~~G~~~w~~~~~~~~ 170 (626)
. ......... .....+..+..+.+|+||+. +. .++|+.++++|+.......
T Consensus 102 ~-----~~~~~~~~~--~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~---- 170 (296)
T 3e5z_A 102 W-----ESIADSFEG--KKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGTLSAPIRD---- 170 (296)
T ss_dssp E-----EEEECEETT--EECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSCEEEEECC----
T ss_pred E-----EEEeeccCC--CCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCCCCEEEeecC----
Confidence 2 221111000 00111233556789999994 31 3589999987665332100
Q ss_pred cccccccccCCCCCccccceEEEcCCCe-EEEEcCCCeEEEEeCC-CCeE-EEEEc-CCCCCcceeeeeecCCeEEEEEc
Q 006913 171 LGYRQGCTKTDVDCYFTSVPVIDQCEGS-IYISNTQGELYSLSAH-SPYF-NWIQD-LSSFDKAFTLTPGNNGYLYVTIP 246 (626)
Q Consensus 171 ~~~~~~~~~~l~~~~i~sspviD~~dG~-LwIGT~~GgL~~ld~~-tg~~-~w~~~-~~s~~~v~sI~~D~dG~LwVGT~ 246 (626)
+ .....++.++ +|. ++..+.++.|++++.+ +|.+ .-... ......+..++.|.+|+|||++
T Consensus 171 ~-------------~~~~gi~~s~-dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~- 235 (296)
T 3e5z_A 171 R-------------VKPNGLAFLP-SGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA- 235 (296)
T ss_dssp C-------------SSEEEEEECT-TSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE-
T ss_pred C-------------CCCccEEECC-CCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc-
Confidence 0 0112355665 555 4444556789999875 4554 11111 1112234567889999999998
Q ss_pred CCCEEEEEECCCCcEEEEEecCCCCCceeeEEEe-eC-CeEEEEEcCCeEEEEcCCC
Q 006913 247 VRALVLALDTSSGNILWHKSVGPLGSAEYAPVVD-SN-GWISVGSLDGLLYSFSPSG 301 (626)
Q Consensus 247 ~gG~l~alD~~tG~~~w~~~~~~l~~~~sspvvD-~d-G~IWVGT~~gGLy~~d~~g 301 (626)
++.+..+|+. |+.......+. . ..+++.+ ++ +.||+++. ++|+++++..
T Consensus 236 -~~~v~~~~~~-g~~~~~~~~~~--~-~~~~~f~~~d~~~L~v~t~-~~l~~~~~~~ 286 (296)
T 3e5z_A 236 -GDGVHVLTPD-GDELGRVLTPQ--T-TSNLCFGGPEGRTLYMTVS-TEFWSIETNV 286 (296)
T ss_dssp -TTEEEEECTT-SCEEEEEECSS--C-CCEEEEESTTSCEEEEEET-TEEEEEECSC
T ss_pred -CCeEEEECCC-CCEEEEEECCC--C-ceeEEEECCCCCEEEEEcC-CeEEEEEccc
Confidence 4688899975 76665544432 1 3445553 34 47999995 6999999753
No 35
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.23 E-value=9.4e-09 Score=106.93 Aligned_cols=236 Identities=14% Similarity=0.123 Sum_probs=150.6
Q ss_pred eeEEeeCCEEEEEe--CCcEEEEcC-CCCEEEEEeCCCCCCcccCeEEecCCeEEEEE--CCeEEEEECCCCccccceeE
Q 006913 41 KPLIGEDGKIYACS--EKTLFAFES-NGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVA--ENRVLKVDLLKIGTSESATQ 115 (626)
Q Consensus 41 spvid~dG~IwIgS--dggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~dG~IwVgT--~ggL~~id~~~~~~~~~~~~ 115 (626)
...+ .++.+|+++ ++.+..+|. +++.+..+.... ....+..+.+|.+|++. ++.|.++|+.++.. .
T Consensus 48 ~i~~-~~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~---~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~-----~ 118 (328)
T 3dsm_A 48 SMVI-RDGIGWIVVNNSHVIFAIDINTFKEVGRITGFT---SPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEI-----T 118 (328)
T ss_dssp EEEE-ETTEEEEEEGGGTEEEEEETTTCCEEEEEECCS---SEEEEEEEETTEEEEEEBSCSEEEEEETTTTEE-----E
T ss_pred EEEE-ECCEEEEEEcCCCEEEEEECcccEEEEEcCCCC---CCcEEEEeCCCeEEEEECCCCeEEEEECCCCeE-----E
Confidence 3445 578999987 467999998 888876664321 22345666678999998 68999999988642 2
Q ss_pred EEecCCCCCCCCCCeeEEEEEEcCCeEEEEEc--CCeEEEEeCC-CcEEEEECCcccccccccccccCCCCCccccceEE
Q 006913 116 VFYGTGSGKGGTGAIAGIAVSTSSSSVYINVK--GRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVI 192 (626)
Q Consensus 116 ~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~--~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspvi 192 (626)
..+................+ .++.||++.. ++.|..+|+. ++..+.... + . ....+.+
T Consensus 119 ~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~-----g-----------~-~p~~i~~ 179 (328)
T 3dsm_A 119 GYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTI-----G-----------I-QPTSLVM 179 (328)
T ss_dssp EEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEEC-----S-----------S-CBCCCEE
T ss_pred EEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEc-----C-----------C-CccceEE
Confidence 22221110000001112222 6889999974 5789999985 777665410 1 0 0133567
Q ss_pred EcCCCeEEEEcCC-----------CeEEEEeCCCCeEEEEEcCCCCCcceeeeeecC-CeEEEEEcCCCEEEEEECCCCc
Q 006913 193 DQCEGSIYISNTQ-----------GELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNN-GYLYVTIPVRALVLALDTSSGN 260 (626)
Q Consensus 193 D~~dG~LwIGT~~-----------GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~d-G~LwVGT~~gG~l~alD~~tG~ 260 (626)
++ +|++|+++.. +.|+++|++++++......+.......++.+.+ +.||++. . .++.+|..+++
T Consensus 180 ~~-dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~--~-~v~~~d~~t~~ 255 (328)
T 3dsm_A 180 DK-YNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWIN--N-DIWRMPVEADR 255 (328)
T ss_dssp CT-TSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEES--S-SEEEEETTCSS
T ss_pred cC-CCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEc--c-EEEEEECCCCc
Confidence 75 8999999864 579999999988775544322123456777754 5788864 2 78889988887
Q ss_pred EEEEEecCCCCCceeeEEEee-CCeEEEEE-----cCCeEEEEcCCCCEEEEee
Q 006913 261 ILWHKSVGPLGSAEYAPVVDS-NGWISVGS-----LDGLLYSFSPSGVLNKFSK 308 (626)
Q Consensus 261 ~~w~~~~~~l~~~~sspvvD~-dG~IWVGT-----~~gGLy~~d~~g~~~~~~~ 308 (626)
+...............+.+++ +|+||++. .++.|++|+++|+..+...
T Consensus 256 ~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~g~~~~~i~ 309 (328)
T 3dsm_A 256 VPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQGKLIDEFY 309 (328)
T ss_dssp CCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTTCCEEEEEE
T ss_pred eeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCCCCEEEEEE
Confidence 531100110012345577885 79999997 4578999999888776543
No 36
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.23 E-value=6.6e-09 Score=106.67 Aligned_cols=232 Identities=11% Similarity=0.096 Sum_probs=143.5
Q ss_pred eeeeeEEeeCCEEEEE-e-CCcEEEEcC-CCCEEEEEeCCCCCCcccCeEEecCCeEEEEE-C-----CeEEEEECCCCc
Q 006913 38 RLSKPLIGEDGKIYAC-S-EKTLFAFES-NGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVA-E-----NRVLKVDLLKIG 108 (626)
Q Consensus 38 ~~Sspvid~dG~IwIg-S-dggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~dG~IwVgT-~-----ggL~~id~~~~~ 108 (626)
....|..+.+|+||+. + +++|+++|. ++++........ ....++..+.+|++|+++ . ++|+++|++++.
T Consensus 46 ~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~--~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~ 123 (333)
T 2dg1_A 46 QLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHK--ANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDN 123 (333)
T ss_dssp CEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSS--SSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCS
T ss_pred cccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCC--CCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCE
Confidence 4467888889999985 4 568999998 666542221111 234567788899999997 3 489999988764
Q ss_pred cccceeEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEcC-------CeEEEEeCC-CcEEEEECCcccccccccccccC
Q 006913 109 TSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKG-------RALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKT 180 (626)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~~-------gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~ 180 (626)
. ....... .....+..+..+.+|++|+++.. ++|+.++++ ++..... . ...
T Consensus 124 ~-----~~~~~~~----~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~---~~~-------- 182 (333)
T 2dg1_A 124 L-----QDIIEDL----STAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPII-Q---NIS-------- 182 (333)
T ss_dssp C-----EEEECSS----SSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEE-E---EES--------
T ss_pred E-----EEEEccC----ccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEee-c---CCC--------
Confidence 2 2111111 11224555667889999999863 679999986 4443211 0 000
Q ss_pred CCCCccccceEEEcCCC-eEEEEcC-CCeEEEEeCCC-Ce-EEEE-----EcCCCCCcceeeeeecCCeEEEEEcCCCEE
Q 006913 181 DVDCYFTSVPVIDQCEG-SIYISNT-QGELYSLSAHS-PY-FNWI-----QDLSSFDKAFTLTPGNNGYLYVTIPVRALV 251 (626)
Q Consensus 181 l~~~~i~sspviD~~dG-~LwIGT~-~GgL~~ld~~t-g~-~~w~-----~~~~s~~~v~sI~~D~dG~LwVGT~~gG~l 251 (626)
....+.+++ +| .||++.. ++.|++++.++ +. .... ........+..++.|.+|+||+++..++.+
T Consensus 183 -----~~~~i~~~~-dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v 256 (333)
T 2dg1_A 183 -----VANGIALST-DEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRV 256 (333)
T ss_dssp -----SEEEEEECT-TSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEE
T ss_pred -----cccceEECC-CCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEE
Confidence 012355665 55 5888754 57899999853 22 2111 111111234568889999999998656789
Q ss_pred EEEECCCCcEEEEEecCCC--C--CceeeEEEeeC-CeEEEEEcCC------eEEEEcC
Q 006913 252 LALDTSSGNILWHKSVGPL--G--SAEYAPVVDSN-GWISVGSLDG------LLYSFSP 299 (626)
Q Consensus 252 ~alD~~tG~~~w~~~~~~l--~--~~~sspvvD~d-G~IWVGT~~g------GLy~~d~ 299 (626)
..+|+ +++....+..+.. + .....++.+++ +.||+++.++ +||+++.
T Consensus 257 ~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~~ 314 (333)
T 2dg1_A 257 LVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNG 314 (333)
T ss_dssp EEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEEC
T ss_pred EEECC-CCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCccCCCCCceEEEEec
Confidence 99997 5666555443310 0 02345666666 4899998763 6777764
No 37
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.21 E-value=9.6e-09 Score=104.10 Aligned_cols=199 Identities=13% Similarity=0.005 Sum_probs=126.3
Q ss_pred ccCeEEecCCe--EEEEE-CCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEcC-CeEEEEe
Q 006913 80 GTAPVHGGTGE--VYIVA-ENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKG-RALFAFM 155 (626)
Q Consensus 80 ~~sp~iD~dG~--IwVgT-~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~~-gGL~a~d 155 (626)
..+|+.|.+|+ +|+++ +++|+++++.++ . ..+.. ....+..+..+.+|+||+++.. ++|+.+|
T Consensus 30 ~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~----~~~~~--------~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d 96 (296)
T 3e5z_A 30 TEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-L----SPEMH--------PSHHQNGHCLNKQGHLIACSHGLRRLERQR 96 (296)
T ss_dssp EEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-E----EEEES--------SCSSEEEEEECTTCCEEEEETTTTEEEEEC
T ss_pred ccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-e----EEEEC--------CCCCcceeeECCCCcEEEEecCCCeEEEEc
Confidence 45688888887 45555 689999999875 2 12211 1123455667889999999864 7899999
Q ss_pred C-CCcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEE-----Ec-------------CCCeEEEEeCCCC
Q 006913 156 T-HGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYI-----SN-------------TQGELYSLSAHSP 216 (626)
Q Consensus 156 ~-~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwI-----GT-------------~~GgL~~ld~~tg 216 (626)
+ +|+....... . .+.. ......+++|+ +|+||+ |+ ..++|++++++ +
T Consensus 97 ~~~g~~~~~~~~----~---~~~~-----~~~~~~i~~d~-~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g 162 (296)
T 3e5z_A 97 EPGGEWESIADS----F---EGKK-----LNSPNDVCLAP-DGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-G 162 (296)
T ss_dssp STTCCEEEEECE----E---TTEE-----CCCCCCEEECT-TSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-S
T ss_pred CCCCcEEEEeec----c---CCCC-----CCCCCCEEECC-CCCEEEECCccccccccccccccccCCCcEEEEECCC-C
Confidence 8 5876543210 0 0000 00123467786 899999 43 14589999988 5
Q ss_pred eEEEEEcCCCCCcceeeeeecCCeEEEEEcCCCEEEEEECC-CCcE-EEEEecCCCCCceeeEEEeeCCeEEEEEcCCeE
Q 006913 217 YFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTS-SGNI-LWHKSVGPLGSAEYAPVVDSNGWISVGSLDGLL 294 (626)
Q Consensus 217 ~~~w~~~~~s~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~-tG~~-~w~~~~~~l~~~~sspvvD~dG~IWVGT~~gGL 294 (626)
++..... .......++.+.+|+++++....+.++.++.. +|.+ ...............+++|++|+||+++ +++|
T Consensus 163 ~~~~~~~--~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~-~~~v 239 (296)
T 3e5z_A 163 TLSAPIR--DRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA-GDGV 239 (296)
T ss_dssp CEEEEEC--CCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE-TTEE
T ss_pred CEEEeec--CCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc-CCeE
Confidence 5543322 22234567778888766665455788888865 5665 2111111111223457899999999999 8999
Q ss_pred EEEcCCCCEEEEee
Q 006913 295 YSFSPSGVLNKFSK 308 (626)
Q Consensus 295 y~~d~~g~~~~~~~ 308 (626)
++|+++|+......
T Consensus 240 ~~~~~~g~~~~~~~ 253 (296)
T 3e5z_A 240 HVLTPDGDELGRVL 253 (296)
T ss_dssp EEECTTSCEEEEEE
T ss_pred EEECCCCCEEEEEE
Confidence 99999987665443
No 38
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.21 E-value=2.5e-07 Score=94.61 Aligned_cols=261 Identities=12% Similarity=0.065 Sum_probs=164.2
Q ss_pred eeeEEeeCC-EEEEEe--------CCcEEEEcC-CCCEEEEEeCCCCCCcccCeEEecCCe-EEEEE--CCeEEEEECCC
Q 006913 40 SKPLIGEDG-KIYACS--------EKTLFAFES-NGTIAWSLDLDFTCNIGTAPVHGGTGE-VYIVA--ENRVLKVDLLK 106 (626)
Q Consensus 40 Sspvid~dG-~IwIgS--------dggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~dG~-IwVgT--~ggL~~id~~~ 106 (626)
..+..+.+| .||+++ ++.++.+|. +++..+.+.... ....+.++.+|+ +|++. ++.|..+|..+
T Consensus 44 ~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~---~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~ 120 (353)
T 3vgz_A 44 YEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDL---KPFGATINNTTQTLWFGNTVNSAVTAIDAKT 120 (353)
T ss_dssp EEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESS---CCCSEEEETTTTEEEEEETTTTEEEEEETTT
T ss_pred cceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCC---CcceEEECCCCCEEEEEecCCCEEEEEeCCC
Confidence 344555555 788877 336999998 788877665432 234567778876 88876 57899999987
Q ss_pred CccccceeEEEecCCC-CC--CCCCCeeEEEEEEcC-CeEEEEEc--CCeEEEEeCC-CcEEEEECCccccccccccccc
Q 006913 107 IGTSESATQVFYGTGS-GK--GGTGAIAGIAVSTSS-SSVYINVK--GRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTK 179 (626)
Q Consensus 107 ~~~~~~~~~~~~~~~~-~~--~~~~~~I~s~~~d~d-G~LwIgT~--~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~ 179 (626)
+.. ...+.... .. .........+....+ +.+|++.. ++.|+.+|.. ++..+.... .
T Consensus 121 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~--------~---- 183 (353)
T 3vgz_A 121 GEV-----KGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQN--------T---- 183 (353)
T ss_dssp CCE-----EEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECC--------C----
T ss_pred Cee-----EEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecC--------C----
Confidence 642 22222111 00 000111233444444 56888873 4569999985 777665410 0
Q ss_pred CCCCCccccceEEEcCCCeEEEEcCCCeEEEEeCCCCeEEEEEcCCC---CCcceeeeeecCC-eEEEEEcCCCEEEEEE
Q 006913 180 TDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSS---FDKAFTLTPGNNG-YLYVTIPVRALVLALD 255 (626)
Q Consensus 180 ~l~~~~i~sspviD~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s---~~~v~sI~~D~dG-~LwVGT~~gG~l~alD 255 (626)
+.. ...+.+++.++.||++..++.|+.+|..+++..+...... ...+..+..+.+| .||++....+.++.+|
T Consensus 184 ---~~~-~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d 259 (353)
T 3vgz_A 184 ---GKM-STGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVD 259 (353)
T ss_dssp ---CTT-CCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEE
T ss_pred ---CCc-cceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEE
Confidence 000 1234565435669999888999999999998887655422 1223446667666 5898876668999999
Q ss_pred CCCCcEEEEEecCCCCCceeeEEEeeCCe-EEEEEc-CCeEEEEcCC-CCEEEEeeccCCCCccccCceEEEEEEecCCc
Q 006913 256 TSSGNILWHKSVGPLGSAEYAPVVDSNGW-ISVGSL-DGLLYSFSPS-GVLNKFSKSDTSDSVIQSSPYWFHLLGPSIGL 332 (626)
Q Consensus 256 ~~tG~~~w~~~~~~l~~~~sspvvD~dG~-IWVGT~-~gGLy~~d~~-g~~~~~~~~~~~~~~ilssp~V~~Il~DsdG~ 332 (626)
..+++.......+. ...+..+++|. +|++.. ++.|..+|.. ++....... ......+..+.+|+
T Consensus 260 ~~~~~~~~~~~~~~----~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~---------~~~~~~~~~s~dg~ 326 (353)
T 3vgz_A 260 TRNGNILAKVAAPE----SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDT---------PTHPNSLALSADGK 326 (353)
T ss_dssp TTTCCEEEEEECSS----CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEEC---------CSEEEEEEECTTSC
T ss_pred CCCCcEEEEEEcCC----CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEec---------CCCCCeEEEcCCCC
Confidence 99999887665542 12356666765 899884 6789999975 655544331 11235677778887
Q ss_pred -EEEEE
Q 006913 333 -KAILC 337 (626)
Q Consensus 333 -IwI~T 337 (626)
||+..
T Consensus 327 ~l~v~~ 332 (353)
T 3vgz_A 327 TLYVSV 332 (353)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 66543
No 39
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.20 E-value=5.9e-09 Score=106.45 Aligned_cols=216 Identities=10% Similarity=0.081 Sum_probs=140.8
Q ss_pred CCeEEEEE--CCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEcCCeEEEEeCCCcEEEEEC
Q 006913 88 TGEVYIVA--ENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTHGQLLWSAG 165 (626)
Q Consensus 88 dG~IwVgT--~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~~gGL~a~d~~G~~~w~~~ 165 (626)
.|++.++. ++.|+++|+++++ ..|.+.... ......+....+|+|++ +.+++++++|++|+++|.+.
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~-----~~w~~~~~~-----~~~~~~~~~~pdG~ilv-s~~~~V~~~d~~G~~~W~~~ 72 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKE-----IVWEYPLEK-----GWECNSVAATKAGEILF-SYSKGAKMITRDGRELWNIA 72 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTE-----EEEEEECCT-----TCCCCEEEECTTSCEEE-ECBSEEEEECTTSCEEEEEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCe-----EEEEeCCCc-----cCCCcCeEECCCCCEEE-eCCCCEEEECCCCCEEEEEc
Confidence 35555553 7899999997875 466654321 01234455667899999 56789999999999999862
Q ss_pred CcccccccccccccCCCCCccccceEEEcCCCeEEEEcC--CCeEEEEeCCCCeEEEEEcCCC-C----CcceeeeeecC
Q 006913 166 PVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNT--QGELYSLSAHSPYFNWIQDLSS-F----DKAFTLTPGNN 238 (626)
Q Consensus 166 ~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~--~GgL~~ld~~tg~~~w~~~~~s-~----~~v~sI~~D~d 238 (626)
. + . ...+ .+..... +|+++++.. ++.++.+|++ |++.|...... . .....+..+.+
T Consensus 73 ~-----~------~---~~~~-~~~~~~~-dG~~lv~~~~~~~~v~~vd~~-Gk~l~~~~~~~~~~~~~~~~~~v~~~~~ 135 (276)
T 3no2_A 73 A-----P------A---GCEM-QTARILP-DGNALVAWCGHPSTILEVNMK-GEVLSKTEFETGIERPHAQFRQINKNKK 135 (276)
T ss_dssp C-----C------T---TCEE-EEEEECT-TSCEEEEEESTTEEEEEECTT-SCEEEEEEECCSCSSGGGSCSCCEECTT
T ss_pred C-----C------C---Cccc-cccEECC-CCCEEEEecCCCCEEEEEeCC-CCEEEEEeccCCCCcccccccCceECCC
Confidence 1 0 0 0111 2233343 677777643 5679999985 57888754321 0 11223456778
Q ss_pred CeEEEEEcCCCEEEEEECCCCcEEEEEecCCCCCceeeEEEeeCCeEEEEEc-CCeEEEEcCC-CCEEEEeeccCCCCcc
Q 006913 239 GYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPVVDSNGWISVGSL-DGLLYSFSPS-GVLNKFSKSDTSDSVI 316 (626)
Q Consensus 239 G~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~~~sspvvD~dG~IWVGT~-~gGLy~~d~~-g~~~~~~~~~~~~~~i 316 (626)
|+++++....+.++++|+. |+.+|.+..+. .... .....+|+++++.. ++.|+++|++ |++.|.........
T Consensus 136 G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~--~~~~-~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~-- 209 (276)
T 3no2_A 136 GNYLVPLFATSEVREIAPN-GQLLNSVKLSG--TPFS-SAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEG-- 209 (276)
T ss_dssp SCEEEEETTTTEEEEECTT-SCEEEEEECSS--CCCE-EEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBS--
T ss_pred CCEEEEecCCCEEEEECCC-CCEEEEEECCC--Cccc-eeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCC--
Confidence 9988887667899999987 99999987642 2233 34456888888655 4479999997 99999765221111
Q ss_pred ccCceEEEEEEecCCcEEEEE
Q 006913 317 QSSPYWFHLLGPSIGLKAILC 337 (626)
Q Consensus 317 lssp~V~~Il~DsdG~IwI~T 337 (626)
...+.+..+....+|++|+..
T Consensus 210 ~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 210 VQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp CCCSEEEEEEECTTSCEEEEE
T ss_pred ccccccccceEcCCCCEEEEe
Confidence 112345567778899999764
No 40
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.20 E-value=9.7e-09 Score=104.95 Aligned_cols=228 Identities=9% Similarity=0.043 Sum_probs=141.6
Q ss_pred CCceeeeeEEee-CCEEEEEe--CCcEEEEcC-CCCEEEEEeCCCCCCcccCeEEecCCeEEEEECCeEEEEECCCCccc
Q 006913 35 SAFRLSKPLIGE-DGKIYACS--EKTLFAFES-NGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAENRVLKVDLLKIGTS 110 (626)
Q Consensus 35 ~~~~~Sspvid~-dG~IwIgS--dggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~dG~IwVgT~ggL~~id~~~~~~~ 110 (626)
....--+|+-+. ++.||+.. .+.|+++|. ++... .+..+ ....++..+.+|++|++++++|+++|++++.+
T Consensus 11 ~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~~~---~~~~~i~~~~dG~l~v~~~~~l~~~d~~~g~~- 85 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ-RVTMD---APVSSVALRQSGGYVATIGTKFCALNWKEQSA- 85 (297)
T ss_dssp CCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE-EEECS---SCEEEEEEBTTSSEEEEETTEEEEEETTTTEE-
T ss_pred CCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE-EEeCC---CceEEEEECCCCCEEEEECCeEEEEECCCCcE-
Confidence 345566787765 57777765 568999998 55543 22222 23456778899999999989999999987632
Q ss_pred cceeEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEcC------------CeEEEEeCCCcEEEEECCcccccccccccc
Q 006913 111 ESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKG------------RALFAFMTHGQLLWSAGPVLDQLGYRQGCT 178 (626)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~~------------gGL~a~d~~G~~~w~~~~~~~~~~~~~~~~ 178 (626)
........ ......+..+..+.+|++|+++.. ++|+.++++|+...... .+.
T Consensus 86 ----~~~~~~~~--~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~----~~~------ 149 (297)
T 3g4e_A 86 ----VVLATVDN--DKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFD----QVD------ 149 (297)
T ss_dssp ----EEEEECCT--TCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEE----EES------
T ss_pred ----EEEEecCC--CCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEee----ccc------
Confidence 22211111 111223455667889999999742 47899998766532210 000
Q ss_pred cCCCCCccccceEEEcCCCeEEEEc-CCCeEEEEeC--CCCeEEEE---EcCCC-CCcceeeeeecCCeEEEEEcCCCEE
Q 006913 179 KTDVDCYFTSVPVIDQCEGSIYISN-TQGELYSLSA--HSPYFNWI---QDLSS-FDKAFTLTPGNNGYLYVTIPVRALV 251 (626)
Q Consensus 179 ~~l~~~~i~sspviD~~dG~LwIGT-~~GgL~~ld~--~tg~~~w~---~~~~s-~~~v~sI~~D~dG~LwVGT~~gG~l 251 (626)
....++.++.+..||+.. ..+.|++++. .+|.+... ..... ......++.|.+|+|||++..++.+
T Consensus 150 -------~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v 222 (297)
T 3g4e_A 150 -------ISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRV 222 (297)
T ss_dssp -------BEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEE
T ss_pred -------cccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEE
Confidence 112345554234577654 4667888875 55654321 11111 1234567889999999999777789
Q ss_pred EEEECCCCcEEEEEecCCCCCceeeEEEe-e-CCeEEEEEcCC
Q 006913 252 LALDTSSGNILWHKSVGPLGSAEYAPVVD-S-NGWISVGSLDG 292 (626)
Q Consensus 252 ~alD~~tG~~~w~~~~~~l~~~~sspvvD-~-dG~IWVGT~~g 292 (626)
..+|+.+|++......+. ....++++. + .++|||++...
T Consensus 223 ~~~d~~tG~~~~~i~~p~--~~~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 223 IRLDPVTGKRLQTVKLPV--DKTTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp EEECTTTCCEEEEEECSS--SBEEEEEEESGGGCEEEEEEBCT
T ss_pred EEEcCCCceEEEEEECCC--CCceEEEEeCCCCCEEEEEcCCc
Confidence 999998898876655441 234556664 2 35899998643
No 41
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.20 E-value=2.4e-11 Score=129.33 Aligned_cols=189 Identities=12% Similarity=0.135 Sum_probs=107.1
Q ss_pred CeEEecCCeEEEEE-CCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEcCCeEEEE-EcCCeEEEEeC-CC
Q 006913 82 APVHGGTGEVYIVA-ENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYIN-VKGRALFAFMT-HG 158 (626)
Q Consensus 82 sp~iD~dG~IwVgT-~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIg-T~~gGL~a~d~-~G 158 (626)
+|++ .++.||+++ ++.|+++|..+++ ..|.+.. +.+...+. ..++.+++. +.++.|+++|. +|
T Consensus 4 sP~v-~~~~v~~gs~dg~v~a~d~~tG~-----~~W~~~~-------~~~~s~p~-~~~g~~~v~~s~dg~l~a~d~~tG 69 (369)
T 2hz6_A 4 TVTL-PETLLFVSTLDGSLHAVSKRTGS-----IKWTLKE-------DPVLQVPT-HVEEPAFLPDPNDGSLYTLGSKNN 69 (369)
T ss_dssp -----CTTEEEEEETTSEEEEEETTTCC-----EEEEEEC-------CCSCCCC------CCEEECTTTCCEEEC-----
T ss_pred CCee-eCCEEEEEcCCCEEEEEECCCCC-----EEEEecC-------CCceecce-EcCCCEEEEeCCCCEEEEEECCCC
Confidence 5666 468999999 7899999998886 3565532 11222222 245656665 67788999998 59
Q ss_pred cEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcCCCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecC
Q 006913 159 QLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNN 238 (626)
Q Consensus 159 ~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~d 238 (626)
+.+|.... .. . ..+..+|++.. ++.||+|+.++.|+++|+++|+..|....... . .... .+
T Consensus 70 ~~~w~~~~-------~~--~-----~~~~~sp~~~~-~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~--~-~~~p-~~ 130 (369)
T 2hz6_A 70 EGLTKLPF-------TI--P-----ELVQASPCRSS-DGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA--D-SLSP-ST 130 (369)
T ss_dssp CCSEECSC-------CH--H-----HHHTTCSCC------CCCCEEEEEEEEECCC------------------------
T ss_pred ceeeeeec-------cC--c-----cccccCceEec-CCEEEEEeCCCEEEEEECCCCcEEEEecCCCc--c-cccc-cC
Confidence 88887411 00 0 01123455522 68899998888999999999999998654321 1 1122 46
Q ss_pred CeEEEEEcCCCEEEEEECCCCcEEEEEecCCCCCceeeEEEee----CCeEEEEEcCCeEEEEcC-CCCEEEEee
Q 006913 239 GYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPVVDS----NGWISVGSLDGLLYSFSP-SGVLNKFSK 308 (626)
Q Consensus 239 G~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~~~sspvvD~----dG~IWVGT~~gGLy~~d~-~g~~~~~~~ 308 (626)
+.||+++. ++.++++|..+|+.+|...... ...++++. ++.+|+++.++.|+++|. +|+..|...
T Consensus 131 ~~v~~~~~-dg~v~a~d~~tG~~~W~~~~~~----~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~ 200 (369)
T 2hz6_A 131 SLLYLGRT-EYTITMYDTKTRELRWNATYFD----YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQN 200 (369)
T ss_dssp --EEEEEE-EEEEECCCSSSSSCCCEEEEEE----ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEE
T ss_pred CEEEEEec-CCEEEEEECCCCCEEEeEeccc----ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEec
Confidence 78999985 4689999999999999865431 22344442 278999999999999998 589999765
No 42
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.19 E-value=9.7e-09 Score=105.42 Aligned_cols=226 Identities=14% Similarity=0.111 Sum_probs=136.5
Q ss_pred cCeEEecCCeEEEEE--CCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEcCC-----eEEE
Q 006913 81 TAPVHGGTGEVYIVA--ENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGR-----ALFA 153 (626)
Q Consensus 81 ~sp~iD~dG~IwVgT--~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~~g-----GL~a 153 (626)
.++..+.+|+||+.. +++|+++|+.++.. ..+.... ...+..+..+.+|++|+++..+ +|+.
T Consensus 48 ~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~----~~~~~~~-------~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~ 116 (333)
T 2dg1_A 48 EGLNFDRQGQLFLLDVFEGNIFKINPETKEI----KRPFVSH-------KANPAAIKIHKDGRLFVCYLGDFKSTGGIFA 116 (333)
T ss_dssp EEEEECTTSCEEEEETTTCEEEEECTTTCCE----EEEEECS-------SSSEEEEEECTTSCEEEEECTTSSSCCEEEE
T ss_pred cCcEECCCCCEEEEECCCCEEEEEeCCCCcE----EEEeeCC-------CCCcceEEECCCCcEEEEeCCCCCCCceEEE
Confidence 466778899999864 67899999887642 1121111 1245566678899999998654 8999
Q ss_pred EeCC-CcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcCC-------CeEEEEeCCCCeEEEEEcCC
Q 006913 154 FMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQ-------GELYSLSAHSPYFNWIQDLS 225 (626)
Q Consensus 154 ~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~~-------GgL~~ld~~tg~~~w~~~~~ 225 (626)
+|++ +........ . . .. .....+.+|+ +|++|+++.. ++|++++++++++.....
T Consensus 117 ~d~~~~~~~~~~~~--------~----~-~~-~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-- 179 (333)
T 2dg1_A 117 ATENGDNLQDIIED--------L----S-TA-YCIDDMVFDS-KGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQ-- 179 (333)
T ss_dssp ECTTSCSCEEEECS--------S----S-SC-CCEEEEEECT-TSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEE--
T ss_pred EeCCCCEEEEEEcc--------C----c-cC-CcccceEECC-CCCEEEEeccccccCCCceEEEEeCCCCEEEEeec--
Confidence 9986 443211100 0 0 00 1123467786 8999999863 689999998766644322
Q ss_pred CCCcceeeeeecCC-eEEEEEcCCCEEEEEECCC-CcEEEE------EecCCCCCceeeEEEeeCCeEEEEEcC-CeEEE
Q 006913 226 SFDKAFTLTPGNNG-YLYVTIPVRALVLALDTSS-GNILWH------KSVGPLGSAEYAPVVDSNGWISVGSLD-GLLYS 296 (626)
Q Consensus 226 s~~~v~sI~~D~dG-~LwVGT~~gG~l~alD~~t-G~~~w~------~~~~~l~~~~sspvvD~dG~IWVGT~~-gGLy~ 296 (626)
....+..++.+.+| .||++....+.++.+|..+ |..... ..... ......+.+|++|++|+++.. ++|++
T Consensus 180 ~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~-~~~~~~i~~d~~G~l~v~~~~~~~v~~ 258 (333)
T 2dg1_A 180 NISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTG-HEGPDSCCIDSDDNLYVAMYGQGRVLV 258 (333)
T ss_dssp EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCS-SSEEEEEEEBTTCCEEEEEETTTEEEE
T ss_pred CCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCC-CCCCCceEECCCCCEEEEEcCCCEEEE
Confidence 11224456777787 4999875556888888643 432211 11111 123455788999999999854 78999
Q ss_pred EcCCCCEEEEeeccCC-CCccccCceEEEEEEecCC-cEEEEEe
Q 006913 297 FSPSGVLNKFSKSDTS-DSVIQSSPYWFHLLGPSIG-LKAILCL 338 (626)
Q Consensus 297 ~d~~g~~~~~~~~~~~-~~~ilssp~V~~Il~DsdG-~IwI~T~ 338 (626)
++++++.......... .+ ....+..+..+.+| .||+.+.
T Consensus 259 ~d~~g~~~~~~~~~~~~~g---~~~~~~~~~~~~dg~~L~v~~~ 299 (333)
T 2dg1_A 259 FNKRGYPIGQILIPGRDEG---HMLRSTHPQFIPGTNQLIICSN 299 (333)
T ss_dssp ECTTSCEEEEEECTTGGGT---CSCBCCEEEECTTSCEEEEEEE
T ss_pred ECCCCCEEEEEEcCCCccc---cccCcceEEECCCCCEEEEEeC
Confidence 9998775543331100 00 00012344445664 7887654
No 43
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.19 E-value=3.7e-09 Score=121.83 Aligned_cols=227 Identities=19% Similarity=0.272 Sum_probs=146.1
Q ss_pred CCCEEEEEeCCCCCCcccCeEEecCCeEEEEE-CCeEEEEECCCCccccceeEEEecCCCCCC----CCCCeeEEEEEEc
Q 006913 64 NGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVA-ENRVLKVDLLKIGTSESATQVFYGTGSGKG----GTGAIAGIAVSTS 138 (626)
Q Consensus 64 ~G~~~W~~~~~~~~~i~~sp~iD~dG~IwVgT-~ggL~~id~~~~~~~~~~~~~~~~~~~~~~----~~~~~I~s~~~d~ 138 (626)
+.+..|.+.++.......+|++ .+|.||+++ ++.|+++|..+++ ..|.+....... .....+...+...
T Consensus 47 ~l~~~W~~~~~~~~~~~~~P~v-~~g~vyv~~~~~~v~AlD~~tG~-----~~W~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (689)
T 1yiq_A 47 QLGLAWSYKLDLDRGVEATPIV-VDGVMYTTGPFSVVYALDARDGR-----LIWKYDPQSDRHRAGEACCDAVNRGVAVW 120 (689)
T ss_dssp GEEEEEEEECSSCSCCCCCCEE-ETTEEEEECGGGCEEEEETTTCC-----EEEEECCCCCGGGGGGCTTCSCCCCCEEE
T ss_pred CceEEEEEECCCCCCceecCEE-ECCEEEEEcCCCeEEEEECCCCc-----eeEEEcCCCCccccccccccCCCCccEEE
Confidence 3467898877532223567877 468999998 6889999999886 467664321100 0001112222346
Q ss_pred CCeEEEEEcCCeEEEEeC-CCcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcC------CCeEEEE
Q 006913 139 SSSVYINVKGRALFAFMT-HGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNT------QGELYSL 211 (626)
Q Consensus 139 dG~LwIgT~~gGL~a~d~-~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~------~GgL~~l 211 (626)
++.||+++.++.|+++|. +|+++|.+.... . .. ....+..+|++. ++.||+++. +|.|+++
T Consensus 121 ~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~---~------~~-~~~~~~~sP~v~--~g~v~vg~~~~~~~~~g~v~a~ 188 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKTGQRAWSVDTRA---D------HK-RSYTITGAPRVV--NGKVVIGNGGAEFGVRGYVTAY 188 (689)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCS---C------TT-SCCBCCSCCEEE--TTEEEECCBCTTTCCBCEEEEE
T ss_pred CCEEEEEccCCEEEEEECCCCCEeeeecCcC---C------CC-CCccccCCcEEE--CCEEEEEeCCCccCCCCEEEEE
Confidence 889999998899999997 599999862200 0 00 011234567776 789999864 4789999
Q ss_pred eCCCCeEEEEEcCC-C--C-C-------------------------c-ceeeeee-cCCeEEEEEcCC------------
Q 006913 212 SAHSPYFNWIQDLS-S--F-D-------------------------K-AFTLTPG-NNGYLYVTIPVR------------ 248 (626)
Q Consensus 212 d~~tg~~~w~~~~~-s--~-~-------------------------~-v~sI~~D-~dG~LwVGT~~g------------ 248 (626)
|.++|+..|..... . . . . ...+..| ..+.||+++.++
T Consensus 189 D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~ 268 (689)
T 1yiq_A 189 DAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAK 268 (689)
T ss_dssp ETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTC
T ss_pred ECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCC
Confidence 99999999986531 0 0 0 0 0124455 367999997431
Q ss_pred ------CEEEEEECCCCcEEEEEecCCCC--C--ceeeEEE-e--eCC----eEEEEEcCCeEEEEcC-CCCEEEEee
Q 006913 249 ------ALVLALDTSSGNILWHKSVGPLG--S--AEYAPVV-D--SNG----WISVGSLDGLLYSFSP-SGVLNKFSK 308 (626)
Q Consensus 249 ------G~l~alD~~tG~~~w~~~~~~l~--~--~~sspvv-D--~dG----~IWVGT~~gGLy~~d~-~g~~~~~~~ 308 (626)
+.++++|+.||+.+|.+...+.. . ....++. | .+| .|++++.+|.||++|+ +|+++|...
T Consensus 269 gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~ 346 (689)
T 1yiq_A 269 GDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKG 346 (689)
T ss_dssp SCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEE
T ss_pred CCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEecccc
Confidence 14999999999999988654210 0 1111211 1 245 5888999999999997 588886443
No 44
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.14 E-value=5.6e-08 Score=100.95 Aligned_cols=224 Identities=14% Similarity=0.128 Sum_probs=138.1
Q ss_pred CceeeeeEEeeC-CEEEEEe--CCcEEEEcC-CCCEEEEEeCCCCCCcccCeEEecCCeEEEEECCeEEEEECCCCcccc
Q 006913 36 AFRLSKPLIGED-GKIYACS--EKTLFAFES-NGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAENRVLKVDLLKIGTSE 111 (626)
Q Consensus 36 ~~~~Sspvid~d-G~IwIgS--dggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~dG~IwVgT~ggL~~id~~~~~~~~ 111 (626)
.....+|..+.+ +.+|+.. .++|++++. ++... .+..+ ....++..+.+|++|+++.++|+.+|+.++..
T Consensus 48 ~~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~~~---~~v~~i~~~~dg~l~v~~~~gl~~~d~~~g~~-- 121 (326)
T 2ghs_A 48 MLLGEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHALP---FMGSALAKISDSKQLIASDDGLFLRDTATGVL-- 121 (326)
T ss_dssp CSBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEECS---SCEEEEEEEETTEEEEEETTEEEEEETTTCCE--
T ss_pred CCCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEECC---CcceEEEEeCCCeEEEEECCCEEEEECCCCcE--
Confidence 345567888764 6666654 568999998 55443 22222 13445677889999999988999999877642
Q ss_pred ceeEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEcC-------CeEEEEeCCCcEEEEECCcccccccccccccCCCCC
Q 006913 112 SATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKG-------RALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDC 184 (626)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~~-------gGL~a~d~~G~~~w~~~~~~~~~~~~~~~~~~l~~~ 184 (626)
....... .......+..+..+.+|++|+++.. ++|+.++ +|+...... ...
T Consensus 122 ---~~~~~~~--~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~-~g~~~~~~~----~~~------------ 179 (326)
T 2ghs_A 122 ---TLHAELE--SDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA-KGKVTKLFA----DIS------------ 179 (326)
T ss_dssp ---EEEECSS--TTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE-TTEEEEEEE----EES------------
T ss_pred ---EEEeeCC--CCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe-CCcEEEeeC----CCc------------
Confidence 2221111 0111234556677889999999852 5899999 765432210 000
Q ss_pred ccccceEEEcCCC-eEEEEc-CCCeEEEEeCC--CC-eE----EEEEcCC-CCCcceeeeeecCCeEEEEEcCCCEEEEE
Q 006913 185 YFTSVPVIDQCEG-SIYISN-TQGELYSLSAH--SP-YF----NWIQDLS-SFDKAFTLTPGNNGYLYVTIPVRALVLAL 254 (626)
Q Consensus 185 ~i~sspviD~~dG-~LwIGT-~~GgL~~ld~~--tg-~~----~w~~~~~-s~~~v~sI~~D~dG~LwVGT~~gG~l~al 254 (626)
....++.++ ++ .||++. ..+.|++++.+ +| .+ .+. ... .......++.|.+|+||+++..++.++.+
T Consensus 180 -~~~~i~~s~-dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~-~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~ 256 (326)
T 2ghs_A 180 -IPNSICFSP-DGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFI-DSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRY 256 (326)
T ss_dssp -SEEEEEECT-TSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEE-ECTTSSSEEEEEEECTTSCEEEEEETTTEEEEE
T ss_pred -ccCCeEEcC-CCCEEEEEECCCCEEEEEEcccccCCcccCceEEE-ECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEE
Confidence 112345554 44 588764 35789999875 55 32 222 111 11234567889999999998666789999
Q ss_pred ECCCCcEEEEEecCCCCCceeeEEEe-eC-CeEEEEEcCCe
Q 006913 255 DTSSGNILWHKSVGPLGSAEYAPVVD-SN-GWISVGSLDGL 293 (626)
Q Consensus 255 D~~tG~~~w~~~~~~l~~~~sspvvD-~d-G~IWVGT~~gG 293 (626)
|+ +|+.......+ .....+++++ ++ +.||+++..++
T Consensus 257 d~-~g~~~~~i~~~--~~~~~~~af~g~d~~~L~vt~~~~~ 294 (326)
T 2ghs_A 257 DT-DGNHIARYEVP--GKQTTCPAFIGPDASRLLVTSAREH 294 (326)
T ss_dssp CT-TCCEEEEEECS--CSBEEEEEEESTTSCEEEEEEBCTT
T ss_pred CC-CCCEEEEEECC--CCCcEEEEEecCCCCEEEEEecCCC
Confidence 97 67765544443 1234556665 44 57999986543
No 45
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.09 E-value=9.1e-08 Score=97.68 Aligned_cols=221 Identities=17% Similarity=0.125 Sum_probs=133.3
Q ss_pred ccCeEEec-CCeEEEEE--CCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEcCCeEEEEeC
Q 006913 80 GTAPVHGG-TGEVYIVA--ENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMT 156 (626)
Q Consensus 80 ~~sp~iD~-dG~IwVgT--~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~~gGL~a~d~ 156 (626)
.-.|+.+. ++.||+.. .+.|+++++.++.. ..+.. ...+..+..+.+|+||+++ .++|+.+|+
T Consensus 15 ~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~----~~~~~---------~~~~~~i~~~~dG~l~v~~-~~~l~~~d~ 80 (297)
T 3g4e_A 15 GESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV----QRVTM---------DAPVSSVALRQSGGYVATI-GTKFCALNW 80 (297)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTTCCE----EEEEC---------SSCEEEEEEBTTSSEEEEE-TTEEEEEET
T ss_pred ccCCeEECCCCEEEEEECCCCEEEEEECCCCcE----EEEeC---------CCceEEEEECCCCCEEEEE-CCeEEEEEC
Confidence 34566665 56777765 68999999987631 11211 1245566678899999998 579999998
Q ss_pred C-CcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcC------------CCeEEEEeCCCCeEEEEEc
Q 006913 157 H-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNT------------QGELYSLSAHSPYFNWIQD 223 (626)
Q Consensus 157 ~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~------------~GgL~~ld~~tg~~~w~~~ 223 (626)
+ |+....... .. ... ......+.+|+ +|++|+++. .+.|+++++++ +......
T Consensus 81 ~~g~~~~~~~~-------~~----~~~-~~~~~di~~d~-dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~~ 146 (297)
T 3g4e_A 81 KEQSAVVLATV-------DN----DKK-NNRFNDGKVDP-AGRYFAGTMAEETAPAVLERHQGALYSLFPDH-HVKKYFD 146 (297)
T ss_dssp TTTEEEEEEEC-------CT----TCS-SEEEEEEEECT-TSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-CEEEEEE
T ss_pred CCCcEEEEEec-------CC----CCC-CCCCCCEEECC-CCCEEEecCCcccccccccCCCcEEEEEECCC-CEEEEee
Confidence 5 655432200 00 000 01123466786 899999973 35799999875 4332211
Q ss_pred CCCCCcceeeeeecCC-eEEEEEcCCCEEEEEEC--CCCcEEEE---EecCCCCCceeeEEEeeCCeEEEEEcC-CeEEE
Q 006913 224 LSSFDKAFTLTPGNNG-YLYVTIPVRALVLALDT--SSGNILWH---KSVGPLGSAEYAPVVDSNGWISVGSLD-GLLYS 296 (626)
Q Consensus 224 ~~s~~~v~sI~~D~dG-~LwVGT~~gG~l~alD~--~tG~~~w~---~~~~~l~~~~sspvvD~dG~IWVGT~~-gGLy~ 296 (626)
.......++.+.|| .||++....+.++.++. .+|..... ............+.+|++|+||+++.+ +.|++
T Consensus 147 --~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~ 224 (297)
T 3g4e_A 147 --QVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIR 224 (297)
T ss_dssp --EESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEE
T ss_pred --ccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEE
Confidence 11223456667777 58888755567777764 67765321 111110123456788999999999864 46999
Q ss_pred EcCC-CCEEEEeeccCCCCccccCceEEEEEEe--cCCcEEEEEe
Q 006913 297 FSPS-GVLNKFSKSDTSDSVIQSSPYWFHLLGP--SIGLKAILCL 338 (626)
Q Consensus 297 ~d~~-g~~~~~~~~~~~~~~ilssp~V~~Il~D--sdG~IwI~T~ 338 (626)
||++ |+...... .+...+.++... ..+.|||.+.
T Consensus 225 ~d~~tG~~~~~i~--------~p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 225 LDPVTGKRLQTVK--------LPVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp ECTTTCCEEEEEE--------CSSSBEEEEEEESGGGCEEEEEEB
T ss_pred EcCCCceEEEEEE--------CCCCCceEEEEeCCCCCEEEEEcC
Confidence 9996 87765443 122334455543 3357887654
No 46
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.06 E-value=3.7e-08 Score=101.70 Aligned_cols=234 Identities=12% Similarity=0.117 Sum_probs=138.5
Q ss_pred eeeeeEEeeCCE-EEEEe-CCcEEEEcCC-CCEE-EEEeCCCC----------------CCcccCeEEec-CCeEEEEE-
Q 006913 38 RLSKPLIGEDGK-IYACS-EKTLFAFESN-GTIA-WSLDLDFT----------------CNIGTAPVHGG-TGEVYIVA- 95 (626)
Q Consensus 38 ~~Sspvid~dG~-IwIgS-dggL~a~d~~-G~~~-W~~~~~~~----------------~~i~~sp~iD~-dG~IwVgT- 95 (626)
.-..+++|.+|+ +|+++ +++|++++.. +.+. |....... ......+.++. +|+|||+.
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~ 99 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDC 99 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEET
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEEC
Confidence 345567777887 88887 5789999984 4443 32211100 01123466785 89999997
Q ss_pred CCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEc-CCeEEEEEcC------------------CeEEEEeC
Q 006913 96 ENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTS-SSSVYINVKG------------------RALFAFMT 156 (626)
Q Consensus 96 ~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~-dG~LwIgT~~------------------gGL~a~d~ 156 (626)
.++|+++++.++.. ......... ........+..+. +|+||+++.. ++|+++|+
T Consensus 100 ~~~i~~~d~~~g~~-----~~~~~~~~~--~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~ 172 (322)
T 2fp8_A 100 YYHLSVVGSEGGHA-----TQLATSVDG--VPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDP 172 (322)
T ss_dssp TTEEEEECTTCEEC-----EEEESEETT--EECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEET
T ss_pred CCCEEEEeCCCCEE-----EEecccCCC--CcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeC
Confidence 67899999876421 111110000 0011234456778 8999998743 56999998
Q ss_pred C-CcEEEEECCcccccccccccccCCCCCccccceEEEcCCC-eEEEEcC-CCeEEEEeCCCC---eEEEEEcCCCCCcc
Q 006913 157 H-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEG-SIYISNT-QGELYSLSAHSP---YFNWIQDLSSFDKA 230 (626)
Q Consensus 157 ~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG-~LwIGT~-~GgL~~ld~~tg---~~~w~~~~~s~~~v 230 (626)
. ++...... .+. ....+++++ +| .||++.. ++.|++++.+++ .......... .
T Consensus 173 ~~~~~~~~~~----~~~-------------~p~gia~~~-dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g---P 231 (322)
T 2fp8_A 173 STKETTLLLK----ELH-------------VPGGAEVSA-DSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN---P 231 (322)
T ss_dssp TTTEEEEEEE----EES-------------CCCEEEECT-TSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS---E
T ss_pred CCCEEEEecc----CCc-------------cCcceEECC-CCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC---C
Confidence 6 54322110 000 012246665 55 5999854 578999998752 2222222211 4
Q ss_pred eeeeeecCCeEEEEEcC----------CCEEEEEECCCCcEEEEEecCC-C-CCceeeEEEeeCCeEEEEEc-CCeEEEE
Q 006913 231 FTLTPGNNGYLYVTIPV----------RALVLALDTSSGNILWHKSVGP-L-GSAEYAPVVDSNGWISVGSL-DGLLYSF 297 (626)
Q Consensus 231 ~sI~~D~dG~LwVGT~~----------gG~l~alD~~tG~~~w~~~~~~-l-~~~~sspvvD~dG~IWVGT~-~gGLy~~ 297 (626)
..+++|.+|+|||++.. .+.++.+|+ +|+....+..+. . ......++. .+|+|||++. +++|.++
T Consensus 232 ~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~ 309 (322)
T 2fp8_A 232 GNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGIL 309 (322)
T ss_dssp EEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEE
T ss_pred CCeEECCCCCEEEEecCcccccccCCCccEEEEECC-CCCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEE
Confidence 56788999999999854 356889996 577665444331 0 112333444 4899999974 5688888
Q ss_pred cCCC
Q 006913 298 SPSG 301 (626)
Q Consensus 298 d~~g 301 (626)
+...
T Consensus 310 ~~~~ 313 (322)
T 2fp8_A 310 VYDK 313 (322)
T ss_dssp EC--
T ss_pred eccc
Confidence 7643
No 47
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.06 E-value=2.8e-08 Score=101.81 Aligned_cols=199 Identities=16% Similarity=0.163 Sum_probs=121.9
Q ss_pred ccCeEEecCCe-E-EEEE-CCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEcC-CeEEEEe
Q 006913 80 GTAPVHGGTGE-V-YIVA-ENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKG-RALFAFM 155 (626)
Q Consensus 80 ~~sp~iD~dG~-I-wVgT-~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~~-gGL~a~d 155 (626)
...|+.+.+|+ | |+.+ +++|+++++.+. . ..+... ...+..+..+.+|+||+++.. ++|+.++
T Consensus 47 ~egp~~~~~g~~l~~~d~~~~~i~~~~~~g~-~----~~~~~~--------~~~~~gl~~d~dG~l~v~~~~~~~v~~~~ 113 (305)
T 3dr2_A 47 SEGPAWWEAQRTLVWSDLVGRRVLGWREDGT-V----DVLLDA--------TAFTNGNAVDAQQRLVHCEHGRRAITRSD 113 (305)
T ss_dssp EEEEEEEGGGTEEEEEETTTTEEEEEETTSC-E----EEEEES--------CSCEEEEEECTTSCEEEEETTTTEEEEEC
T ss_pred ccCCeEeCCCCEEEEEECCCCEEEEEeCCCC-E----EEEeCC--------CCccceeeECCCCCEEEEECCCCEEEEEC
Confidence 34677777777 4 4444 689999998542 1 112111 123455667889999999865 7899999
Q ss_pred CCCcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEE-----EcC-------------CCeEEEEeCCCCe
Q 006913 156 THGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYI-----SNT-------------QGELYSLSAHSPY 217 (626)
Q Consensus 156 ~~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwI-----GT~-------------~GgL~~ld~~tg~ 217 (626)
++|+....... . .+... +....+++++ +|+||+ |+. .++|+++|+++++
T Consensus 114 ~~g~~~~~~~~----~---~~~~~-----~~~~~i~~d~-dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~ 180 (305)
T 3dr2_A 114 ADGQAHLLVGR----Y---AGKRL-----NSPNDLIVAR-DGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSP 180 (305)
T ss_dssp TTSCEEEEECE----E---TTEEC-----SCCCCEEECT-TSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCC
T ss_pred CCCCEEEEEec----c---CCCcc-----CCCCCEEECC-CCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCc
Confidence 88775433211 0 00000 0123467886 999999 442 3689999998777
Q ss_pred EEEEEcCCCCCcceeeeeecCCe-EEEEEcCC-----CEEEEEECCCCcEEEEE-ecCCCCCceeeEEEeeCCeEEEEEc
Q 006913 218 FNWIQDLSSFDKAFTLTPGNNGY-LYVTIPVR-----ALVLALDTSSGNILWHK-SVGPLGSAEYAPVVDSNGWISVGSL 290 (626)
Q Consensus 218 ~~w~~~~~s~~~v~sI~~D~dG~-LwVGT~~g-----G~l~alD~~tG~~~w~~-~~~~l~~~~sspvvD~dG~IWVGT~ 290 (626)
+..... ......++.+.||+ ||++.... ..++.++...+...... ...........+.+|.+|+||+++
T Consensus 181 ~~~~~~---~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~- 256 (305)
T 3dr2_A 181 LQRMAD---LDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSS- 256 (305)
T ss_dssp CEEEEE---ESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECC-
T ss_pred EEEEec---CCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEec-
Confidence 654321 12234566777774 99987531 57877776544321111 000001123457889999999999
Q ss_pred CCeEEEEcCCCCEEEEee
Q 006913 291 DGLLYSFSPSGVLNKFSK 308 (626)
Q Consensus 291 ~gGLy~~d~~g~~~~~~~ 308 (626)
.++|++|+++|+......
T Consensus 257 ~~gv~~~~~~g~~~~~~~ 274 (305)
T 3dr2_A 257 GTGVCVFDSDGQLLGHIP 274 (305)
T ss_dssp SSEEEEECTTSCEEEEEE
T ss_pred CCcEEEECCCCCEEEEEE
Confidence 568999999987665443
No 48
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.05 E-value=7.1e-08 Score=99.54 Aligned_cols=237 Identities=14% Similarity=0.089 Sum_probs=138.0
Q ss_pred cCeEEecCCe-EEEEE-CCeEEEEECCCCccccceeEEEecCCCCC-------------CCCCCeeEEEEEEc-CCeEEE
Q 006913 81 TAPVHGGTGE-VYIVA-ENRVLKVDLLKIGTSESATQVFYGTGSGK-------------GGTGAIAGIAVSTS-SSSVYI 144 (626)
Q Consensus 81 ~sp~iD~dG~-IwVgT-~ggL~~id~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~I~s~~~d~-dG~LwI 144 (626)
..+++|.+|+ +|+++ +++|+++++.++.. ..+........ ..... ...+..+. +|+||+
T Consensus 22 ~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~----~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-p~gi~~~~~~g~l~v 96 (322)
T 2fp8_A 22 NSFTFDSTNKGFYTSVQDGRVIKYEGPNSGF----VDFAYASPYWNKAFCENSTDAEKRPLCGR-TYDISYNLQNNQLYI 96 (322)
T ss_dssp CCEECCTTCSSEEEECTTSEEEEECCTTTCE----EEEEESCTTCCHHHHTTCCCGGGHHHHCC-EEEEEEETTTTEEEE
T ss_pred eEEEEcCCCCEEEEEcCCCeEEEECCCCCce----EEEecccccccccccccccchhccccCCC-CceEEEcCCCCcEEE
Confidence 3567788888 88887 78999999876532 12221110000 00011 23345564 899999
Q ss_pred EEcCCeEEEEeCC-CcEEEEECCcccccccccccccCCCCCccccceEEEcC-CCeEEEEcCC-----------------
Q 006913 145 NVKGRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQC-EGSIYISNTQ----------------- 205 (626)
Q Consensus 145 gT~~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~-dG~LwIGT~~----------------- 205 (626)
++..++|+.+|++ +........ . .+ .. ......+++| . +|+||+++..
T Consensus 97 ~d~~~~i~~~d~~~g~~~~~~~~----~---~~--~~---~~~p~~i~~d-~~~G~l~v~d~~~~~~~~~~~~~~~~~~~ 163 (322)
T 2fp8_A 97 VDCYYHLSVVGSEGGHATQLATS----V---DG--VP---FKWLYAVTVD-QRTGIVYFTDVSTLYDDRGVQQIMDTSDK 163 (322)
T ss_dssp EETTTEEEEECTTCEECEEEESE----E---TT--EE---CSCEEEEEEC-TTTCCEEEEESCSSCCTTCHHHHHHHTCC
T ss_pred EECCCCEEEEeCCCCEEEEeccc----C---CC--Cc---ccccceEEEe-cCCCEEEEECCcccccccccceehcccCC
Confidence 9888899999987 433221100 0 00 00 0011235667 4 6899998643
Q ss_pred -CeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCC-eEEEEEcCCCEEEEEECCC---CcEEEEEecCCCCCceeeEEEe
Q 006913 206 -GELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNG-YLYVTIPVRALVLALDTSS---GNILWHKSVGPLGSAEYAPVVD 280 (626)
Q Consensus 206 -GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG-~LwVGT~~gG~l~alD~~t---G~~~w~~~~~~l~~~~sspvvD 280 (626)
++|+++|++++++...... ......++.+.+| .|||+....+.++.++..+ +......... + ...+++|
T Consensus 164 ~g~v~~~d~~~~~~~~~~~~--~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~--g--P~gi~~d 237 (322)
T 2fp8_A 164 TGRLIKYDPSTKETTLLLKE--LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIP--N--PGNIKRN 237 (322)
T ss_dssp CEEEEEEETTTTEEEEEEEE--ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECS--S--EEEEEEC
T ss_pred CceEEEEeCCCCEEEEeccC--CccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCC--C--CCCeEEC
Confidence 6799999988776433221 1123456778887 4999976567899998654 2322211221 1 4557889
Q ss_pred eCCeEEEEEcC-----------CeEEEEcCCCCEEEEeeccCCCCccccCceEEEEEEecCCcEEEEEeeecCeeEEe
Q 006913 281 SNGWISVGSLD-----------GLLYSFSPSGVLNKFSKSDTSDSVIQSSPYWFHLLGPSIGLKAILCLMVVGQFSSL 347 (626)
Q Consensus 281 ~dG~IWVGT~~-----------gGLy~~d~~g~~~~~~~~~~~~~~ilssp~V~~Il~DsdG~IwI~T~t~~Ggl~~~ 347 (626)
++|+|||++.. +.|++|+++|+........ ++. ..+.+..+.. .+|+|||.+.. .+.+..+
T Consensus 238 ~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~--~g~--~~~~~~~~~~-~~g~L~v~~~~-~~~i~~~ 309 (322)
T 2fp8_A 238 ADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLP--PPF--AGEHFEQIQE-HDGLLYIGTLF-HGSVGIL 309 (322)
T ss_dssp TTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECC--TTT--TTSCCCEEEE-ETTEEEEECSS-CSEEEEE
T ss_pred CCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECC--CCC--ccccceEEEE-eCCEEEEeecC-CCceEEE
Confidence 99999999864 5799999998876544321 110 0112223433 47999976432 3444443
No 49
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.04 E-value=3.1e-07 Score=95.43 Aligned_cols=246 Identities=8% Similarity=-0.031 Sum_probs=150.6
Q ss_pred CCcEEEEcC-CCCEEEEEeC--CC--CCCcccCeEEecCCeEEEEE--CCeEEEEECCCCccccceeEEEecCCCCCCCC
Q 006913 55 EKTLFAFES-NGTIAWSLDL--DF--TCNIGTAPVHGGTGEVYIVA--ENRVLKVDLLKIGTSESATQVFYGTGSGKGGT 127 (626)
Q Consensus 55 dggL~a~d~-~G~~~W~~~~--~~--~~~i~~sp~iD~dG~IwVgT--~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~ 127 (626)
+++|..+|. ++++...+.. .. .......+.++ ++.+|+++ ++.|..+|+.+++. ...+..
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~-----~~~i~~------- 82 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKE-----VGRITG------- 82 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCE-----EEEEEC-------
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEE-----EEEcCC-------
Confidence 357999998 6775421110 00 00112334454 58899998 57899999988642 122211
Q ss_pred CCeeEEEEEEcCCeEEEEE-cCCeEEEEeCC-CcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcC-
Q 006913 128 GAIAGIAVSTSSSSVYINV-KGRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNT- 204 (626)
Q Consensus 128 ~~~I~s~~~d~dG~LwIgT-~~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~- 204 (626)
......+..+.+|++|++. .++.|..+|+. +++.+.... +... ... .....++++ ++.||++.+
T Consensus 83 ~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~-----g~~~--~~~----~~p~~i~~~--~~~lyv~~~~ 149 (328)
T 3dsm_A 83 FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIEC-----PDMD--MES----GSTEQMVQY--GKYVYVNCWS 149 (328)
T ss_dssp CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEEC-----TTCC--TTT----CBCCCEEEE--TTEEEEEECT
T ss_pred CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEc-----CCcc--ccC----CCcceEEEE--CCEEEEEcCC
Confidence 1122334444677999998 67889999985 777655411 1000 000 001234555 899999974
Q ss_pred -CCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCCeEEEEEcCC----------CEEEEEECCCCcEEEEEecCCCCCc
Q 006913 205 -QGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVR----------ALVLALDTSSGNILWHKSVGPLGSA 273 (626)
Q Consensus 205 -~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG~LwVGT~~g----------G~l~alD~~tG~~~w~~~~~~l~~~ 273 (626)
++.|..+|++++++.+....+. ....++.+.+|++|+++... +.++.+|+.++++......+. +..
T Consensus 150 ~~~~v~viD~~t~~~~~~i~~g~--~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~-g~~ 226 (328)
T 3dsm_A 150 YQNRILKIDTETDKVVDELTIGI--QPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKL-GDW 226 (328)
T ss_dssp TCCEEEEEETTTTEEEEEEECSS--CBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCT-TCC
T ss_pred CCCEEEEEECCCCeEEEEEEcCC--CccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCC-CCC
Confidence 6789999999998877655432 23456778899999998543 689999999998776554431 123
Q ss_pred eeeEEEee-CCeEEEEEcCCeEEEEcCC-CCEEEEeeccCCCCccccCceEEEEEEec-CCcEEEEE
Q 006913 274 EYAPVVDS-NGWISVGSLDGLLYSFSPS-GVLNKFSKSDTSDSVIQSSPYWFHLLGPS-IGLKAILC 337 (626)
Q Consensus 274 ~sspvvD~-dG~IWVGT~~gGLy~~d~~-g~~~~~~~~~~~~~~ilssp~V~~Il~Ds-dG~IwI~T 337 (626)
...+++++ ++.+|+... .|+.+|.. +++... ..... .......+..|. +|+||+..
T Consensus 227 p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~-~~~~~-----~~~~p~gi~vdp~~g~lyva~ 285 (328)
T 3dsm_A 227 PSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVR-PFLEF-----RDTKYYGLTVNPNNGEVYVAD 285 (328)
T ss_dssp CEEEEECTTSCEEEEESS--SEEEEETTCSSCCSS-CSBCC-----CSSCEEEEEECTTTCCEEEEE
T ss_pred ceeEEEecCCCEEEEEcc--EEEEEECCCCceeee-eeecC-----CCCceEEEEEcCCCCeEEEEc
Confidence 45577775 467888653 89999975 443210 00000 023345777885 89999754
No 50
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.04 E-value=2.4e-07 Score=96.13 Aligned_cols=218 Identities=12% Similarity=0.078 Sum_probs=131.9
Q ss_pred cCeEEecC-CeEEEEE--CCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEcCCeEEEEeCC
Q 006913 81 TAPVHGGT-GEVYIVA--ENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTH 157 (626)
Q Consensus 81 ~sp~iD~d-G~IwVgT--~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~~gGL~a~d~~ 157 (626)
..|..+.+ +.+|+.. +++|+++++.++.. ..+.. ...+..+..+.+|++|+++ ..||+.+|+.
T Consensus 52 egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~----~~~~~---------~~~v~~i~~~~dg~l~v~~-~~gl~~~d~~ 117 (326)
T 2ghs_A 52 EGPTFDPASGTAWWFNILERELHELHLASGRK----TVHAL---------PFMGSALAKISDSKQLIAS-DDGLFLRDTA 117 (326)
T ss_dssp EEEEEETTTTEEEEEEGGGTEEEEEETTTTEE----EEEEC---------SSCEEEEEEEETTEEEEEE-TTEEEEEETT
T ss_pred cCCeEeCCCCEEEEEECCCCEEEEEECCCCcE----EEEEC---------CCcceEEEEeCCCeEEEEE-CCCEEEEECC
Confidence 35666664 5666654 68999999987631 11211 1234556667899999998 4689999975
Q ss_pred -CcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcC-------CCeEEEEeCCCCeEEEEEcCCCCCc
Q 006913 158 -GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNT-------QGELYSLSAHSPYFNWIQDLSSFDK 229 (626)
Q Consensus 158 -G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~-------~GgL~~ld~~tg~~~w~~~~~s~~~ 229 (626)
|+....... . .... ......+.+|+ +|++|+++. .++|++++ ++++..... ....
T Consensus 118 ~g~~~~~~~~-------~----~~~~-~~~~~~i~~d~-~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~--~~~~ 180 (326)
T 2ghs_A 118 TGVLTLHAEL-------E----SDLP-GNRSNDGRMHP-SGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFA--DISI 180 (326)
T ss_dssp TCCEEEEECS-------S----TTCT-TEEEEEEEECT-TSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEE--EESS
T ss_pred CCcEEEEeeC-------C----CCCC-CCCCCCEEECC-CCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeC--CCcc
Confidence 765432210 0 0000 01124467786 899999975 36899999 456543322 1112
Q ss_pred ceeeeeecCC-eEEEEEcCCCEEEEEECC--CC-cE----EEEEecCCCCCceeeEEEeeCCeEEEEEcC-CeEEEEcCC
Q 006913 230 AFTLTPGNNG-YLYVTIPVRALVLALDTS--SG-NI----LWHKSVGPLGSAEYAPVVDSNGWISVGSLD-GLLYSFSPS 300 (626)
Q Consensus 230 v~sI~~D~dG-~LwVGT~~gG~l~alD~~--tG-~~----~w~~~~~~l~~~~sspvvD~dG~IWVGT~~-gGLy~~d~~ 300 (626)
...++.+.|| .||++....+.++.++.. +| .+ .+. ...........+.+|.+|++|+++.+ ++|++++++
T Consensus 181 ~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~-~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~ 259 (326)
T 2ghs_A 181 PNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFI-DSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTD 259 (326)
T ss_dssp EEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEE-ECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTT
T ss_pred cCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEE-ECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCC
Confidence 3456667777 588887555788888864 66 32 121 11111123456788999999999964 789999998
Q ss_pred CCEEEEeeccCCCCccccCceEEEEEEe-cC-CcEEEEEe
Q 006913 301 GVLNKFSKSDTSDSVIQSSPYWFHLLGP-SI-GLKAILCL 338 (626)
Q Consensus 301 g~~~~~~~~~~~~~~ilssp~V~~Il~D-sd-G~IwI~T~ 338 (626)
++...... .+...+.++..+ .+ +.||+.+.
T Consensus 260 g~~~~~i~--------~~~~~~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 260 GNHIARYE--------VPGKQTTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp CCEEEEEE--------CSCSBEEEEEEESTTSCEEEEEEB
T ss_pred CCEEEEEE--------CCCCCcEEEEEecCCCCEEEEEec
Confidence 77654333 122345566655 44 56776543
No 51
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.02 E-value=1.7e-07 Score=97.16 Aligned_cols=252 Identities=12% Similarity=0.121 Sum_probs=151.0
Q ss_pred ceeeeeEEeeCCEEEEEeC-C-------------------------cEEEEcC-CCCEEEEEeCCCCCCcccCeEEecCC
Q 006913 37 FRLSKPLIGEDGKIYACSE-K-------------------------TLFAFES-NGTIAWSLDLDFTCNIGTAPVHGGTG 89 (626)
Q Consensus 37 ~~~Sspvid~dG~IwIgSd-g-------------------------gL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~dG 89 (626)
......+++.+|+||++.. + .++.+|. +|++........ ......+.+|.+|
T Consensus 24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~-~~~p~gia~d~~g 102 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNL-FYLPHGLSIDTDG 102 (329)
T ss_dssp SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTT-CSSEEEEEECTTS
T ss_pred CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCc-cCCceEEEECCCC
Confidence 4456778889999999863 2 4999998 688764332111 1123456788999
Q ss_pred eEEEEE--CCeEEEEECCCCccccceeEEEecCCCCC---CCCCCeeEEEEEEc-CCeEEEEE-c-CCeEEEEeCCCcEE
Q 006913 90 EVYIVA--ENRVLKVDLLKIGTSESATQVFYGTGSGK---GGTGAIAGIAVSTS-SSSVYINV-K-GRALFAFMTHGQLL 161 (626)
Q Consensus 90 ~IwVgT--~ggL~~id~~~~~~~~~~~~~~~~~~~~~---~~~~~~I~s~~~d~-dG~LwIgT-~-~gGL~a~d~~G~~~ 161 (626)
+||++. ++.|.++++++... ....+...... ...-.....+..+. +|+||++. . ++.|..++++|+.+
T Consensus 103 ~l~v~d~~~~~v~~~~~~g~~~----~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~~~ 178 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHSKEG----PLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGKFV 178 (329)
T ss_dssp CEEEEETTTTEEEEECTTCSSC----CSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTSCEE
T ss_pred CEEEEECCCCEEEEEeCCCCeE----EEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCCEE
Confidence 999986 57899999876410 11222211000 00011233455666 89999997 3 67899999889887
Q ss_pred EEECCcccccccccccccCCCCCccccceEEEcCC-CeEEEEcC-CCeEEEEeCCCCeEEEEEcCCC-CCccee------
Q 006913 162 WSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCE-GSIYISNT-QGELYSLSAHSPYFNWIQDLSS-FDKAFT------ 232 (626)
Q Consensus 162 w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~d-G~LwIGT~-~GgL~~ld~~tg~~~w~~~~~s-~~~v~s------ 232 (626)
+.+... +... ... ...-.....+++|+ + +.||++.. ++.|.++++++|++........ ...+..
T Consensus 179 ~~~~~~----g~~~-~~~-~~~~~~p~gia~d~-~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg 251 (329)
T 3fvz_A 179 TQWGEE----SSGS-SPR-PGQFSVPHSLALVP-HLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPG 251 (329)
T ss_dssp EEECEE----CCSS-SCC-TTEESCEEEEEEET-TTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETT
T ss_pred EEeccC----CCCC-CCC-CcccCCCcEEEEEC-CCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCC
Confidence 764210 0000 000 00001123467786 5 89999875 5679999999777765543221 112222
Q ss_pred eeeecCCeEEEEEcCCCEEEEEECCCCcEEEEEecCC-CCCceeeEEEeeCCeEEEEEc-CCeEEEEcCC
Q 006913 233 LTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGP-LGSAEYAPVVDSNGWISVGSL-DGLLYSFSPS 300 (626)
Q Consensus 233 I~~D~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~-l~~~~sspvvD~dG~IWVGT~-~gGLy~~d~~ 300 (626)
++.+.+|++|++......+..++..+|+.+....... .......++++++|.|||+.. ++.|.+|+.+
T Consensus 252 ~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 252 FLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLT 321 (329)
T ss_dssp EEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEE
T ss_pred EEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCC
Confidence 2333466666665445578888988998876543211 112355688899999999874 4567777653
No 52
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.99 E-value=3.4e-08 Score=101.11 Aligned_cols=229 Identities=11% Similarity=0.136 Sum_probs=136.7
Q ss_pred cCCceeeeeEEeeCCE--EEEEe-CCcEEEEcCCCCEEEEEeCCCCCCcccCeEEecCCeEEEEE--CCeEEEEECCCCc
Q 006913 34 RSAFRLSKPLIGEDGK--IYACS-EKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVA--ENRVLKVDLLKIG 108 (626)
Q Consensus 34 ~~~~~~Sspvid~dG~--IwIgS-dggL~a~d~~G~~~W~~~~~~~~~i~~sp~iD~dG~IwVgT--~ggL~~id~~~~~ 108 (626)
........|+.+.+|+ +|+.. .+.|++++.+|...- +.... .....+..|.+|++|+++ .++|+++++++ .
T Consensus 42 ~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g~~~~-~~~~~--~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~g-~ 117 (305)
T 3dr2_A 42 DQATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDGTVDV-LLDAT--AFTNGNAVDAQQRLVHCEHGRRAITRSDADG-Q 117 (305)
T ss_dssp CCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETTSCEEE-EEESC--SCEEEEEECTTSCEEEEETTTTEEEEECTTS-C
T ss_pred cCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCCCCEEE-EeCCC--CccceeeECCCCCEEEEECCCCEEEEECCCC-C
Confidence 3445556788888776 45555 568999998776431 22221 234567889999999998 46899999863 2
Q ss_pred cccceeEEEecCCCCCCCCCCeeEEEEEEcCCeEEE-----EEc-------------CCeEEEEeCC-CcEEEEECCccc
Q 006913 109 TSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYI-----NVK-------------GRALFAFMTH-GQLLWSAGPVLD 169 (626)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwI-----gT~-------------~gGL~a~d~~-G~~~w~~~~~~~ 169 (626)
. .......... ....+..+..+.+|+||+ |+. .++|++++++ |+..... .
T Consensus 118 ~-----~~~~~~~~~~--~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~--- 186 (305)
T 3dr2_A 118 A-----HLLVGRYAGK--RLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-D--- 186 (305)
T ss_dssp E-----EEEECEETTE--ECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-E---
T ss_pred E-----EEEEeccCCC--ccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-c---
Confidence 1 2211110000 011223456688999999 432 2579999984 6543211 0
Q ss_pred ccccccccccCCCCCccccceEEEcCCC-eEEEEcCC------CeEEEEeCCCCeEEEEEcC--CCCCcceeeeeecCCe
Q 006913 170 QLGYRQGCTKTDVDCYFTSVPVIDQCEG-SIYISNTQ------GELYSLSAHSPYFNWIQDL--SSFDKAFTLTPGNNGY 240 (626)
Q Consensus 170 ~~~~~~~~~~~l~~~~i~sspviD~~dG-~LwIGT~~------GgL~~ld~~tg~~~w~~~~--~s~~~v~sI~~D~dG~ 240 (626)
+. ....+++++ ++ .||++... +.|++++.+++.+.-.... ........+++|.+|+
T Consensus 187 -~~-------------~p~gl~~sp-dg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~ 251 (305)
T 3dr2_A 187 -LD-------------HPNGLAFSP-DEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGW 251 (305)
T ss_dssp -ES-------------SEEEEEECT-TSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSC
T ss_pred -CC-------------CCcceEEcC-CCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCC
Confidence 00 012245554 44 58988664 6799988776542111110 0112234578899999
Q ss_pred EEEEEcCCCEEEEEECCCCcEEEEEecCCCCCceeeEEEeeC-CeEEEEEcCCeEEEEcC
Q 006913 241 LYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPVVDSN-GWISVGSLDGLLYSFSP 299 (626)
Q Consensus 241 LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~~~sspvvD~d-G~IWVGT~~gGLy~~d~ 299 (626)
||+++. ++++.+++ +|+.+.....+. ....++.+++ +.||+++. ++||+++.
T Consensus 252 lwv~~~--~gv~~~~~-~g~~~~~~~~~~---~~~~~~f~~d~~~L~it~~-~~l~~~~~ 304 (305)
T 3dr2_A 252 LWSSSG--TGVCVFDS-DGQLLGHIPTPG---TASNCTFDQAQQRLFITGG-PCLWMLPL 304 (305)
T ss_dssp EEECCS--SEEEEECT-TSCEEEEEECSS---CCCEEEECTTSCEEEEEET-TEEEEEEC
T ss_pred EEEecC--CcEEEECC-CCCEEEEEECCC---ceeEEEEeCCCCEEEEEcC-CeEEEEEC
Confidence 999983 46889996 676665544432 1234555434 57999995 68999863
No 53
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=98.92 E-value=5.6e-09 Score=110.24 Aligned_cols=203 Identities=18% Similarity=0.198 Sum_probs=115.5
Q ss_pred CCEEEEEe-CCcEEEEcC-CCCEEEEEeCCCCCCcc--cCeEEecCCeEEEE--E-CCeEEEEECCCCccccceeEEEec
Q 006913 47 DGKIYACS-EKTLFAFES-NGTIAWSLDLDFTCNIG--TAPVHGGTGEVYIV--A-ENRVLKVDLLKIGTSESATQVFYG 119 (626)
Q Consensus 47 dG~IwIgS-dggL~a~d~-~G~~~W~~~~~~~~~i~--~sp~iD~dG~IwVg--T-~ggL~~id~~~~~~~~~~~~~~~~ 119 (626)
+|.|++++ +|.|+++|. +|+.+|++......... ..+....++.+|++ + +|.|++++..++. ..|.+.
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~-----~~~~~~ 84 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGL-----QKLPLS 84 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEE-----EEEEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCc-----EEeeec
Confidence 57899998 788999998 99999998654100111 01111135678877 4 7999999988763 234322
Q ss_pred CCCCCCCCCCee-E-EEEE------EcCCeEEEEEcCCeEEEEeC-CCcEEEEECCcccccccccccccCCCCCccccce
Q 006913 120 TGSGKGGTGAIA-G-IAVS------TSSSSVYINVKGRALFAFMT-HGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVP 190 (626)
Q Consensus 120 ~~~~~~~~~~~I-~-s~~~------d~dG~LwIgT~~gGL~a~d~-~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~ssp 190 (626)
... .....+.. . .++. ..+|.+|+|+.++.|+++|. +|+.+|.+.. +.+..........++
T Consensus 85 ~~~-lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~---------~~~~~~~~~~~e~~~ 154 (339)
T 2be1_A 85 IRQ-LVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGP---------GSKNGYFGSQSVDCS 154 (339)
T ss_dssp HHH-HHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEEST---------TCBCC----------
T ss_pred ccc-ceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEec---------CCCcccccccccccc
Confidence 100 00001111 1 1112 16889999999999999997 5999998722 111000000000011
Q ss_pred E-E----EcCCCeEEEEcCCCeEEEEeCCCCeEEEEEcCCC-----CCc-c-eeeeeecCCeEEEEEcCCCEEEEEECCC
Q 006913 191 V-I----DQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSS-----FDK-A-FTLTPGNNGYLYVTIPVRALVLALDTSS 258 (626)
Q Consensus 191 v-i----D~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s-----~~~-v-~sI~~D~dG~LwVGT~~gG~l~alD~~t 258 (626)
. . |.+++.|++|.....+++.+ ++|+ .|...... ... + .......||.+++++. .+.++++|+.+
T Consensus 155 ~~~d~~~d~~~~~v~ig~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~~~~~~-dg~v~A~d~~~ 231 (339)
T 2be1_A 155 PEEKIKLQECENMIVIGKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMCIAPFR-DKSLLASDLDF 231 (339)
T ss_dssp ----------CCEEEEEEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCCEEEET-TTEEEEECSTT
T ss_pred cccccccccCCCeEEEecceEEEEEEC-CCCC-eEEEecccccccccccccccccccccCCcEEEECC-CCEEEEEECCC
Confidence 1 1 11367899988776666666 5566 78643221 110 0 0001123577788774 68999999999
Q ss_pred CcEEE-EEec
Q 006913 259 GNILW-HKSV 267 (626)
Q Consensus 259 G~~~w-~~~~ 267 (626)
|..+| +...
T Consensus 232 G~~~W~~~~l 241 (339)
T 2be1_A 232 RIARWVSPTF 241 (339)
T ss_dssp CCEEEECCCC
T ss_pred CcEEEEeecC
Confidence 99999 5443
No 54
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.83 E-value=2.1e-06 Score=88.79 Aligned_cols=234 Identities=12% Similarity=0.098 Sum_probs=136.9
Q ss_pred ccCeEEecCCeEEEEE-CC-------------------------eEEEEECCCCccccceeEEEecCCCCCCCCCCeeEE
Q 006913 80 GTAPVHGGTGEVYIVA-EN-------------------------RVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGI 133 (626)
Q Consensus 80 ~~sp~iD~dG~IwVgT-~g-------------------------gL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s 133 (626)
..++.+|.+|++|++. .+ .|+.+|+.++.. ...+... .-.....
T Consensus 26 v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~-----~~~~~~~-----~~~~p~g 95 (329)
T 3fvz_A 26 VSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEI-----LQSSGKN-----LFYLPHG 95 (329)
T ss_dssp EEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCE-----EEEECTT-----TCSSEEE
T ss_pred ceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeE-----EeccCCC-----ccCCceE
Confidence 4456778888999886 23 488899876642 2222211 0112344
Q ss_pred EEEEcCCeEEEEEc-CCeEEEEeCCCc--EEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEc-C-CCeE
Q 006913 134 AVSTSSSSVYINVK-GRALFAFMTHGQ--LLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISN-T-QGEL 208 (626)
Q Consensus 134 ~~~d~dG~LwIgT~-~gGL~a~d~~G~--~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT-~-~GgL 208 (626)
+..+.+|+||++.. ++.|..++++|+ .+...... + ..+.... .......+++++.++.||++. + ++.|
T Consensus 96 ia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~----~-~~g~~~~--~~~~P~~ia~~~~~g~lyv~d~~~~~~I 168 (329)
T 3fvz_A 96 LSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRS----M-QPGSDQN--HFCQPTDVAVEPSTGAVFVSDGYCNSRI 168 (329)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBT----T-BCCCSTT--CCSSEEEEEECTTTCCEEEEECSSCCEE
T ss_pred EEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEeccc----C-CCCCCcc--ccCCCcEEEEeCCCCeEEEEeCCCCCeE
Confidence 56678899999865 467899998876 34433110 0 0000000 000123456773378999988 3 7889
Q ss_pred EEEeCCCCeEEEEEcC-C--------CCCcceeeeeecC-CeEEEEEcCCCEEEEEECCCCcEEEEEecCCCCCceeeE-
Q 006913 209 YSLSAHSPYFNWIQDL-S--------SFDKAFTLTPGNN-GYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAP- 277 (626)
Q Consensus 209 ~~ld~~tg~~~w~~~~-~--------s~~~v~sI~~D~d-G~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~~~ssp- 277 (626)
.++++++ .+.+.... + ....+..++.+.+ |+|||+...++.+..+++.+|+.+........+.....+
T Consensus 169 ~~~~~~g-~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~ 247 (329)
T 3fvz_A 169 VQFSPSG-KFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAIS 247 (329)
T ss_dssp EEECTTS-CEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEE
T ss_pred EEEcCCC-CEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceee
Confidence 9999765 55544321 1 1123567888887 899999877789999998889887665333212112222
Q ss_pred -----EEeeCCeEEEEEc-CCeEEEEcC-CCCEEEEeeccCCCCccccCceEEEEEEecCCcEEEE
Q 006913 278 -----VVDSNGWISVGSL-DGLLYSFSP-SGVLNKFSKSDTSDSVIQSSPYWFHLLGPSIGLKAIL 336 (626)
Q Consensus 278 -----vvD~dG~IWVGT~-~gGLy~~d~-~g~~~~~~~~~~~~~~ilssp~V~~Il~DsdG~IwI~ 336 (626)
+++.+|.+|++.. +..++.++. +|+....... ... .......|..+.+|+||+.
T Consensus 248 ~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~--~~~---~~~~p~~ia~~~dG~lyva 308 (329)
T 3fvz_A 248 YIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKP--VRK---HFDMPHDIVASEDGTVYIG 308 (329)
T ss_dssp EETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECC--SSS---CCSSEEEEEECTTSEEEEE
T ss_pred ecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcC--CCC---ccCCeeEEEECCCCCEEEE
Confidence 3333566665543 336888885 4766554321 111 1223457888999999864
No 55
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.73 E-value=1.9e-05 Score=80.44 Aligned_cols=223 Identities=14% Similarity=0.109 Sum_probs=138.8
Q ss_pred eeeEEeeCCE-EEEEe--CCcEEEEcC-CCCEEEEEeCCCCCC-------cccCeEEecCCe-EEEEE---CCeEEEEEC
Q 006913 40 SKPLIGEDGK-IYACS--EKTLFAFES-NGTIAWSLDLDFTCN-------IGTAPVHGGTGE-VYIVA---ENRVLKVDL 104 (626)
Q Consensus 40 Sspvid~dG~-IwIgS--dggL~a~d~-~G~~~W~~~~~~~~~-------i~~sp~iD~dG~-IwVgT---~ggL~~id~ 104 (626)
..+.++.+|. +|++. ++.+..+|. +++..+.+....... ....+.++.+|+ +|++. ++.|+.+|.
T Consensus 92 ~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~ 171 (353)
T 3vgz_A 92 FGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDG 171 (353)
T ss_dssp CSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEET
T ss_pred ceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcC
Confidence 3445656665 88876 467999998 888877766532110 023456677765 78776 466999999
Q ss_pred CCCccccceeEEEecCCCCCCCCCCeeEEEEEE-cCCeEEEEEcCCeEEEEeCC-CcEEEEECCcccccccccccccCCC
Q 006913 105 LKIGTSESATQVFYGTGSGKGGTGAIAGIAVST-SSSSVYINVKGRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDV 182 (626)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d-~dG~LwIgT~~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~ 182 (626)
.++. ....+... +.....+... .+..||++..++.|+.+|.. ++..+.... + . ..
T Consensus 172 ~~~~-----~~~~~~~~------~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~-----~-~----~~-- 228 (353)
T 3vgz_A 172 GNIK-----LKTAIQNT------GKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKL-----L-D----DG-- 228 (353)
T ss_dssp TTTE-----EEEEECCC------CTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEEC-----C-C----SS--
T ss_pred CCCc-----eEEEecCC------CCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEc-----C-C----CC--
Confidence 8763 22222211 1111222233 44568888888889999975 877765410 0 0 00
Q ss_pred CCccccceEEEcCCCeEEEEcCC-CeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCCe-EEEEEcCCCEEEEEECCCCc
Q 006913 183 DCYFTSVPVIDQCEGSIYISNTQ-GELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGY-LYVTIPVRALVLALDTSSGN 260 (626)
Q Consensus 183 ~~~i~sspviD~~dG~LwIGT~~-GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG~-LwVGT~~gG~l~alD~~tG~ 260 (626)
.......+.+++.++.||++... +.|+.+|..+++.......+. ...+..+.+|+ +|++...++.+..+|..+++
T Consensus 229 ~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~---~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~ 305 (353)
T 3vgz_A 229 KEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE---SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYK 305 (353)
T ss_dssp SCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS---CCCEEEETTTTEEEEEETTTTEEEEEETTTTE
T ss_pred CCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC---CceEEECCCCCEEEEEECCCCeEEEEECCCCe
Confidence 00112234566524568888764 789999999988876655332 23455666775 99988666899999999998
Q ss_pred EEEEEecCCCCCceeeEEEeeCCe-EEEEEcC
Q 006913 261 ILWHKSVGPLGSAEYAPVVDSNGW-ISVGSLD 291 (626)
Q Consensus 261 ~~w~~~~~~l~~~~sspvvD~dG~-IWVGT~~ 291 (626)
.......+ .....+.++++|. ||++..+
T Consensus 306 ~~~~~~~~---~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 306 VVKTFDTP---THPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp EEEEEECC---SEEEEEEECTTSCEEEEEEEC
T ss_pred EEEEEecC---CCCCeEEEcCCCCEEEEEEcc
Confidence 87665543 1345567777775 8887754
No 56
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=98.72 E-value=2.5e-08 Score=105.29 Aligned_cols=197 Identities=8% Similarity=0.015 Sum_probs=115.9
Q ss_pred CCeEEEEE-CCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEE--EEEcCCeEEEE--EcCCeEEEEeCC-CcEE
Q 006913 88 TGEVYIVA-ENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIA--VSTSSSSVYIN--VKGRALFAFMTH-GQLL 161 (626)
Q Consensus 88 dG~IwVgT-~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~--~~d~dG~LwIg--T~~gGL~a~d~~-G~~~ 161 (626)
+|.+|++| +|.|+++|..+++ ..|.+.... ....+... ....++.+|++ +.++.|++++.. |...
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~-----~~W~~~~~~----~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~ 80 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGH-----IIWSIEPEN----FQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQK 80 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTE-----EEEEECGGG----SCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCc-----EEEEecCCc----cCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEE
Confidence 46899999 8999999999885 467664320 01111110 00136678877 568999999975 8777
Q ss_pred EEECCcccccccccccccCCCCCccccceEEE------cCCCeEEEEcCCCeEEEEeCCCCeEEEEEcCCCCC------c
Q 006913 162 WSAGPVLDQLGYRQGCTKTDVDCYFTSVPVID------QCEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFD------K 229 (626)
Q Consensus 162 w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD------~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s~~------~ 229 (626)
|.... + .. ...+.......|+++ . +|.||+|+.+|.++++|..+|+..|....+... .
T Consensus 81 ~~~~~-----~-~l---v~~SP~~~~~~pvv~~~~~~~~-~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~ 150 (339)
T 2be1_A 81 LPLSI-----R-QL---VSTSPLHLKTNIVVNDSGKIVE-DEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQS 150 (339)
T ss_dssp EEEEH-----H-HH---HTTCSEEEECC----------C-CEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC------
T ss_pred eeecc-----c-cc---eeccccccCCCceeeccccccc-CCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccc
Confidence 76411 0 00 000000002334451 3 789999999999999999999999997654211 1
Q ss_pred ceeeee------ecCCeEEEEEcCCCEEEEEECCCCcEEEEEecCCC--CCc----eeeEEEeeCCeEEEEEcCCeEEEE
Q 006913 230 AFTLTP------GNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPL--GSA----EYAPVVDSNGWISVGSLDGLLYSF 297 (626)
Q Consensus 230 v~sI~~------D~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l--~~~----~sspvvD~dG~IWVGT~~gGLy~~ 297 (626)
..+... +.++.|++|... ..+.+.+ ++|+ .|....... ... ........+|.+++++.++.|+++
T Consensus 151 e~~~~~~d~~~d~~~~~v~ig~~~-y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~~~~~~dg~v~A~ 227 (339)
T 2be1_A 151 VDCSPEEKIKLQECENMIVIGKTI-FELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMCIAPFRDKSLLAS 227 (339)
T ss_dssp --------------CCEEEEEEEE-EECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCCEEEETTTEEEEE
T ss_pred cccccccccccccCCCeEEEecce-EEEEEEC-CCCC-eEEEecccccccccccccccccccccCCcEEEECCCCEEEEE
Confidence 111111 235789998743 3555556 6787 785432200 000 000111235778899999999999
Q ss_pred cCC-CCEEEE
Q 006913 298 SPS-GVLNKF 306 (626)
Q Consensus 298 d~~-g~~~~~ 306 (626)
|+. |+.+|+
T Consensus 228 d~~~G~~~W~ 237 (339)
T 2be1_A 228 DLDFRIARWV 237 (339)
T ss_dssp CSTTCCEEEE
T ss_pred ECCCCcEEEE
Confidence 985 889884
No 57
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=98.60 E-value=8.5e-06 Score=86.66 Aligned_cols=226 Identities=10% Similarity=0.053 Sum_probs=126.4
Q ss_pred EecCCeEEEEECCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEc--CCeEEEEEcCC----eEEEEeCCC
Q 006913 85 HGGTGEVYIVAENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTS--SSSVYINVKGR----ALFAFMTHG 158 (626)
Q Consensus 85 iD~dG~IwVgT~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~--dG~LwIgT~~g----GL~a~d~~G 158 (626)
.|+++.||+||..|+++++...+.. .|.... .......+..+..+. ++.||+++..+ ||++.+..|
T Consensus 19 ~d~~g~l~vgt~~Gl~~~~~~~~g~-----~W~~~~---~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G 90 (394)
T 3b7f_A 19 ESGPVMLLVATIKGAWFLASDPARR-----TWELRG---PVFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRSDDGG 90 (394)
T ss_dssp CCSCCEEEEEETTEEEEEEECTTSC-----SEEEEE---EESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEESSTT
T ss_pred CCCCCEEEEEecCceEEEECCCCCC-----CceECC---ccCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEeCCCC
Confidence 4678999999988899987654211 222100 001234566777776 78999999876 788765545
Q ss_pred cEEEEECCcccccccccccccCCC-----CCccccceEEEcC--CCeEEEEcCCCeEEEEeCCCCeEEEEEcC-----C-
Q 006913 159 QLLWSAGPVLDQLGYRQGCTKTDV-----DCYFTSVPVIDQC--EGSIYISNTQGELYSLSAHSPYFNWIQDL-----S- 225 (626)
Q Consensus 159 ~~~w~~~~~~~~~~~~~~~~~~l~-----~~~i~sspviD~~--dG~LwIGT~~GgL~~ld~~tg~~~w~~~~-----~- 225 (626)
+ .|..-.. ...+ ..... ......++++++. .+.||+++..++|++.+-.+. .|..-. +
T Consensus 91 ~-tW~~~~~--~~~~----~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~DgG~--tW~~~~~~~~~p~ 161 (394)
T 3b7f_A 91 G-NWTEATR--PPAF----NKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTDHGA--SWEPVAGFNDHPM 161 (394)
T ss_dssp S-CCEECSB--CCCC----CCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEESSTTS--BCEECHHHHTCTT
T ss_pred C-CceECCc--cccC----CCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEcCCCC--CeEECcCccCCcc
Confidence 4 4653110 0000 00000 0001123455521 588999998889998754332 354321 0
Q ss_pred -------------CCCcceeeeeec--CCeEEEEEcCCCEEEEEECCCCcEEEEEecCCC------------CCceeeEE
Q 006913 226 -------------SFDKAFTLTPGN--NGYLYVTIPVRALVLALDTSSGNILWHKSVGPL------------GSAEYAPV 278 (626)
Q Consensus 226 -------------s~~~v~sI~~D~--dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l------------~~~~sspv 278 (626)
....+.++++|. .++||+++.. +.++..+ ++-..|....... +..+..++
T Consensus 162 ~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~-ggl~~s~--DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~ 238 (394)
T 3b7f_A 162 RRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSS-GGVFEST--DAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVV 238 (394)
T ss_dssp HHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEET-BEEEEES--STTSSCEECCTTCCCTTSSSSSSSSCBCEEEEE
T ss_pred ccccccccccCCCCCCceeEEEECCCCCCEEEEEECC-CCEEEEC--CCCCCceECCCCccccccCCCccccCcceeEEE
Confidence 012345677764 5789999853 5676654 3334565322110 11245567
Q ss_pred EeeC--CeEEEEEcCCeEEEEcCCCCEEEEeeccCCCCccccC---ceEEEEEEe--cCCcEEEEE
Q 006913 279 VDSN--GWISVGSLDGLLYSFSPSGVLNKFSKSDTSDSVIQSS---PYWFHLLGP--SIGLKAILC 337 (626)
Q Consensus 279 vD~d--G~IWVGT~~gGLy~~d~~g~~~~~~~~~~~~~~ilss---p~V~~Il~D--sdG~IwI~T 337 (626)
++++ +.||+++ .++||+.+..|+. |..... . ++. ..++.|.++ ..+.||+++
T Consensus 239 ~~~~~~~~l~vg~-~~gl~~s~D~G~t-W~~~~~---~--l~~~~~~~~~~i~~~p~~~~~l~~~t 297 (394)
T 3b7f_A 239 QHPAAPDILYQQN-HCGIYRMDRREGV-WKRIGD---A--MPREVGDIGFPIVVHQRDPRTVWVFP 297 (394)
T ss_dssp ECSSSTTEEEEEE-TTEEEEEETTTTE-EECGGG---G--SCTTTCSCEEEEEECSSCTTCEEEEE
T ss_pred ECCCCCCEEEEEc-CCeEEEeCCCCCc-ceECCC---C--CCCCCccceEEEEECCCCCCEEEEEe
Confidence 7765 8999998 4689988766654 322210 0 122 345677776 568899876
No 58
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.59 E-value=0.00023 Score=74.97 Aligned_cols=252 Identities=11% Similarity=0.051 Sum_probs=151.9
Q ss_pred eeEEeeCCEEEEEe--CCcEEEEcC-CCCEEEEEeCC---CCCCcccCeEEecCCeEEEEE--CCeEEEEECCCCccccc
Q 006913 41 KPLIGEDGKIYACS--EKTLFAFES-NGTIAWSLDLD---FTCNIGTAPVHGGTGEVYIVA--ENRVLKVDLLKIGTSES 112 (626)
Q Consensus 41 spvid~dG~IwIgS--dggL~a~d~-~G~~~W~~~~~---~~~~i~~sp~iD~dG~IwVgT--~ggL~~id~~~~~~~~~ 112 (626)
.+....++.++++. ++.+..+|. +|+........ .....+.++....+|.+|++. ++.|..+|..++..
T Consensus 127 ~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~--- 203 (433)
T 3bws_A 127 SVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAY--- 203 (433)
T ss_dssp CCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCE---
T ss_pred EEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceE---
Confidence 44555578888876 446999998 67765422211 101223345566788888876 68999999877531
Q ss_pred eeEEEecCCCCCCCCCCeeEEEEEEcCC-eEEEEE-cCCeEEEEeCC-CcEEEEECCcccccccccccccCCCCCccccc
Q 006913 113 ATQVFYGTGSGKGGTGAIAGIAVSTSSS-SVYINV-KGRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSV 189 (626)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~I~s~~~d~dG-~LwIgT-~~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~ss 189 (626)
...+.. . ...+..+....++ .++++. .++.|..+|.. ++....... ... ...
T Consensus 204 --~~~~~~-----~-~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~----------------~~~-~~~ 258 (433)
T 3bws_A 204 --KATVDL-----T-GKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK----------------IGL-PRG 258 (433)
T ss_dssp --EEEEEC-----S-SSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCC----------------CSE-EEE
T ss_pred --EEEEcC-----C-CCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC----------------CCC-ceE
Confidence 222211 1 1233444444444 566665 46789999975 766554310 001 133
Q ss_pred eEEEcCCCeEEEEcC--------CCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCC-eEEEEEcCCCEEEEEECCCCc
Q 006913 190 PVIDQCEGSIYISNT--------QGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNG-YLYVTIPVRALVLALDTSSGN 260 (626)
Q Consensus 190 pviD~~dG~LwIGT~--------~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG-~LwVGT~~gG~l~alD~~tG~ 260 (626)
+..++.+..||++.. ++.|+.+|.++++......... .+..++.+.+| .+|+.....+.+..+|..+++
T Consensus 259 ~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~--~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~ 336 (433)
T 3bws_A 259 LLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPG--NKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKK 336 (433)
T ss_dssp EEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEE--CEEEEEECSSTTEEEEEETTTTEEEEEETTTTE
T ss_pred EEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCC--CcceEEECCCCCEEEEEecCCCEEEEEECCCCc
Confidence 455542447888773 6789999999887765532111 23455666677 688876667899999998888
Q ss_pred EEEEEecCCCCCceeeEEEeeCC-eEEEEEcC---------------CeEEEEcCC-CCEEEEeeccCCCCccccCceEE
Q 006913 261 ILWHKSVGPLGSAEYAPVVDSNG-WISVGSLD---------------GLLYSFSPS-GVLNKFSKSDTSDSVIQSSPYWF 323 (626)
Q Consensus 261 ~~w~~~~~~l~~~~sspvvD~dG-~IWVGT~~---------------gGLy~~d~~-g~~~~~~~~~~~~~~ilssp~V~ 323 (626)
........ .....+...++| .+|+++.+ |.|+.+|.. ++....... ...+.
T Consensus 337 ~~~~~~~~---~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~---------~~~~~ 404 (433)
T 3bws_A 337 VQKSIPVF---DKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA---------GNQPT 404 (433)
T ss_dssp EEEEEECS---SSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC---------SSSEE
T ss_pred EEEEecCC---CCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC---------CCCCc
Confidence 87665433 224557777777 48888763 589999974 555443331 11234
Q ss_pred EEEEecCCcEE
Q 006913 324 HLLGPSIGLKA 334 (626)
Q Consensus 324 ~Il~DsdG~Iw 334 (626)
.+....+|...
T Consensus 405 ~~~~s~dg~~l 415 (433)
T 3bws_A 405 GLDVSPDNRYL 415 (433)
T ss_dssp EEEECTTSCEE
T ss_pred eEEEcCCCCEE
Confidence 55566666544
No 59
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=98.54 E-value=9.5e-06 Score=86.30 Aligned_cols=232 Identities=13% Similarity=0.124 Sum_probs=124.0
Q ss_pred EeeCCEEEEEeCCcEEEEcC-CCCEEEEEeC-CCCCCcccCeEEec--CCeEEEEE-CC----eEEEEECCCCcccccee
Q 006913 44 IGEDGKIYACSEKTLFAFES-NGTIAWSLDL-DFTCNIGTAPVHGG--TGEVYIVA-EN----RVLKVDLLKIGTSESAT 114 (626)
Q Consensus 44 id~dG~IwIgSdggL~a~d~-~G~~~W~~~~-~~~~~i~~sp~iD~--dG~IwVgT-~g----gL~~id~~~~~~~~~~~ 114 (626)
+|.+|.||+|+..||+.++. ++...|.... ......+.++++|. +++||+++ .+ +|++.+..+.
T Consensus 19 ~d~~g~l~vgt~~Gl~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G~------- 91 (394)
T 3b7f_A 19 ESGPVMLLVATIKGAWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRSDDGGG------- 91 (394)
T ss_dssp CCSCCEEEEEETTEEEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEESSTTS-------
T ss_pred CCCCCEEEEEecCceEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEeCCCCC-------
Confidence 55789999999888998886 3222454321 01113456778886 78999998 45 7888754443
Q ss_pred EEEecCCCC--CCC-------CCCeeEEEEEEc---CCeEEEEEcCCeEEEEeCCCcEEEEECCcccccccc----cccc
Q 006913 115 QVFYGTGSG--KGG-------TGAIAGIAVSTS---SSSVYINVKGRALFAFMTHGQLLWSAGPVLDQLGYR----QGCT 178 (626)
Q Consensus 115 ~~~~~~~~~--~~~-------~~~~I~s~~~d~---dG~LwIgT~~gGL~a~d~~G~~~w~~~~~~~~~~~~----~~~~ 178 (626)
.|....... ... ....+..+..+. .+.||+++..+||++.+..|+. |..-......+.+ .+..
T Consensus 92 tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~DgG~t-W~~~~~~~~~p~~~~~~~~~~ 170 (394)
T 3b7f_A 92 NWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTDHGAS-WEPVAGFNDHPMRRAWTGGEQ 170 (394)
T ss_dssp CCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEESSTTSB-CEECHHHHTCTTHHHHHCCC-
T ss_pred CceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEcCCCCC-eEECcCccCCccccccccccc
Confidence 222111000 000 112344444442 7899999988899888655653 7531100000000 0000
Q ss_pred c-CCCCCccccceEEEc-CCCeEEEEcCCCeEEEEeCCCCeEEEEEcCCC--C-----------CcceeeeeecC--CeE
Q 006913 179 K-TDVDCYFTSVPVIDQ-CEGSIYISNTQGELYSLSAHSPYFNWIQDLSS--F-----------DKAFTLTPGNN--GYL 241 (626)
Q Consensus 179 ~-~l~~~~i~sspviD~-~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s--~-----------~~v~sI~~D~d--G~L 241 (626)
. ...... ...+.+|+ ..+.||+++..++|++.+-.+ ..|...... . ..+.+++.+.+ +.|
T Consensus 171 ~g~~~~~~-i~~i~~d~~~~~~l~vg~~~ggl~~s~DgG--~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l 247 (394)
T 3b7f_A 171 DGTPDGPK-MHSILVDPRDPKHLYIGMSSGGVFESTDAG--TDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDIL 247 (394)
T ss_dssp ---CCCCE-EEEEEECTTCTTCEEEEEETBEEEEESSTT--SSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEE
T ss_pred cCCCCCCc-eeEEEECCCCCCEEEEEECCCCEEEECCCC--CCceECCCCccccccCCCccccCcceeEEEECCCCCCEE
Confidence 0 000011 13455663 147899998888888875433 346532110 0 12456677654 899
Q ss_pred EEEEcCCCEEEEEECCCCcEEEEEecCCC-C---CceeeEEEe--eCCeEEEEEc
Q 006913 242 YVTIPVRALVLALDTSSGNILWHKSVGPL-G---SAEYAPVVD--SNGWISVGSL 290 (626)
Q Consensus 242 wVGT~~gG~l~alD~~tG~~~w~~~~~~l-~---~~~sspvvD--~dG~IWVGT~ 290 (626)
|+++. +.++..+ ++...|......+ . .....+.++ ..+.||+++.
T Consensus 248 ~vg~~--~gl~~s~--D~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t~ 298 (394)
T 3b7f_A 248 YQQNH--CGIYRMD--RREGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVFPM 298 (394)
T ss_dssp EEEET--TEEEEEE--TTTTEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEEEC
T ss_pred EEEcC--CeEEEeC--CCCCcceECCCCCCCCCccceEEEEECCCCCCEEEEEec
Confidence 99984 4676665 3334665422111 1 223345665 4689999974
No 60
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.48 E-value=9.5e-05 Score=75.59 Aligned_cols=229 Identities=11% Similarity=0.057 Sum_probs=129.7
Q ss_pred ceeeeeEEeeCCEEEEEe--CCcEEEEcCCCCEEEEEeCCCCCCcccCeEEecCCeEEEEE--CCe--EEEEECCCCccc
Q 006913 37 FRLSKPLIGEDGKIYACS--EKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVA--ENR--VLKVDLLKIGTS 110 (626)
Q Consensus 37 ~~~Sspvid~dG~IwIgS--dggL~a~d~~G~~~W~~~~~~~~~i~~sp~iD~dG~IwVgT--~gg--L~~id~~~~~~~ 110 (626)
.....++++.+|+||++. .+.|+++|.+|......... .....+.++.+|++|++. .++ |+.++..++..
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~~~~~~~---~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~- 107 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQIHATVE---GKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTV- 107 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEEECS---SEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCE-
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCceEEEEeCC---CCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeE-
Confidence 345678888899999986 56899999977654323332 234456778899999986 334 88888766532
Q ss_pred cceeEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEc-CCeEEEEeCC-Cc-EEEEECCcccccccccccccCCCCCccc
Q 006913 111 ESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVK-GRALFAFMTH-GQ-LLWSAGPVLDQLGYRQGCTKTDVDCYFT 187 (626)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~-~gGL~a~d~~-G~-~~w~~~~~~~~~~~~~~~~~~l~~~~i~ 187 (626)
........ ......+....++.+|+... .+.|+++|+. ++ .++.....+.. . . ....+. ..
T Consensus 108 ----~~~~~~~~-----~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~-~--~-~~~~~~---~p 171 (306)
T 2p4o_A 108 ----ETLLTLPD-----AIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLAR-S--N-SESVFP---AA 171 (306)
T ss_dssp ----EEEEECTT-----CSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSC-S--S-TTCCSC---SE
T ss_pred ----EEEEeCCC-----ccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCcccc-c--c-ccCCCC---cC
Confidence 21111110 11112223345677888764 5789999986 42 23322110000 0 0 000000 01
Q ss_pred cceEEEcCCCeEEEEcC-CCeEEEEeCCC-CeE---EEEEcCCCCCcceeeeeecCCeEEEEEcCCCEEEEEECCCCcEE
Q 006913 188 SVPVIDQCEGSIYISNT-QGELYSLSAHS-PYF---NWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNIL 262 (626)
Q Consensus 188 sspviD~~dG~LwIGT~-~GgL~~ld~~t-g~~---~w~~~~~s~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~tG~~~ 262 (626)
..+..| ++.||++.. .+.|++++.++ +.+ ...... .....++.|.+|+|||+...++.+..+++ +|+..
T Consensus 172 ngis~d--g~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~---~~P~gi~vd~dG~l~va~~~~~~V~~~~~-~G~~~ 245 (306)
T 2p4o_A 172 NGLKRF--GNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQ---TNIDDFAFDVEGNLYGATHIYNSVVRIAP-DRSTT 245 (306)
T ss_dssp EEEEEE--TTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEES---CCCSSEEEBTTCCEEEECBTTCCEEEECT-TCCEE
T ss_pred CCcCcC--CCEEEEEeCCCCEEEEEEeCCCCCCCccEEEecc---CCCCCeEECCCCCEEEEeCCCCeEEEECC-CCCEE
Confidence 112223 568999865 56799998764 332 111111 12345788999999999876678999996 47664
Q ss_pred EEEecCCCCCceeeEEEe---eC-CeEEEEEcC
Q 006913 263 WHKSVGPLGSAEYAPVVD---SN-GWISVGSLD 291 (626)
Q Consensus 263 w~~~~~~l~~~~sspvvD---~d-G~IWVGT~~ 291 (626)
.............+++++ ++ ++|||.+..
T Consensus 246 ~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 246 IIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp EEECGGGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred EEeecccccCCceEEEEecccCCCCEEEEECCC
Confidence 321121001224556665 34 689998853
No 61
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.47 E-value=0.0011 Score=68.74 Aligned_cols=238 Identities=12% Similarity=0.086 Sum_probs=143.5
Q ss_pred EEEEEe--CCcEEEEcC-CCCEEEEEeCCCCCCcccCeEEecCCe-EEEEE--CCeEEEEECCCCccccceeEEEecCCC
Q 006913 49 KIYACS--EKTLFAFES-NGTIAWSLDLDFTCNIGTAPVHGGTGE-VYIVA--ENRVLKVDLLKIGTSESATQVFYGTGS 122 (626)
Q Consensus 49 ~IwIgS--dggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~dG~-IwVgT--~ggL~~id~~~~~~~~~~~~~~~~~~~ 122 (626)
.+++.. ++.|..+|. +++....+.... ...++....+|. |+++. ++.|..+|..++.. ...+..
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~---~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~-----~~~~~~-- 72 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGS---NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNV-----IATVPA-- 72 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSS---SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEE-----EEEEEC--
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCC---CcceEEECCCCCEEEEECCCCCeEEEEECCCCeE-----EEEEEC--
Confidence 456644 567899997 777766554432 234566677776 55654 68899999877632 222211
Q ss_pred CCCCCCCeeEEEEEEcCC-eEEEEEc-CCeEEEEeCC-CcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeE
Q 006913 123 GKGGTGAIAGIAVSTSSS-SVYINVK-GRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSI 199 (626)
Q Consensus 123 ~~~~~~~~I~s~~~d~dG-~LwIgT~-~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~L 199 (626)
...+..+....++ .|+++.. ++.|..+|.. ++....... + .. ...+...+.+..|
T Consensus 73 -----~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~-----~-----------~~-~~~~~~s~dg~~l 130 (391)
T 1l0q_A 73 -----GSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKT-----G-----------KS-PLGLALSPDGKKL 130 (391)
T ss_dssp -----SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC-----S-----------SS-EEEEEECTTSSEE
T ss_pred -----CCCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeC-----C-----------CC-cceEEECCCCCEE
Confidence 1133444444444 5777654 4789999975 666554310 0 01 1334555423447
Q ss_pred EE-EcCCCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCC-eEEEEEcCCCEEEEEECCCCcEEEEEecCCCCCceeeE
Q 006913 200 YI-SNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNG-YLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAP 277 (626)
Q Consensus 200 wI-GT~~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG-~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~~~ssp 277 (626)
|+ +..++.|+.+|..+++......... .+..+....+| .||+....++.++.+|..+++........ .....+
T Consensus 131 ~~~~~~~~~v~~~d~~~~~~~~~~~~~~--~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~---~~~~~~ 205 (391)
T 1l0q_A 131 YVTNNGDKTVSVINTVTKAVINTVSVGR--SPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVE---AAPSGI 205 (391)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEECCS--SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS---SEEEEE
T ss_pred EEEeCCCCEEEEEECCCCcEEEEEecCC--CcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecC---CCccce
Confidence 54 4457889999999988776544322 23455666666 57777656678999999888776555433 223446
Q ss_pred EEeeCC-eEEEEE---cCCeEEEEcCC-CCEEEEeeccCCCCccccCceEEEEEEecCCc
Q 006913 278 VVDSNG-WISVGS---LDGLLYSFSPS-GVLNKFSKSDTSDSVIQSSPYWFHLLGPSIGL 332 (626)
Q Consensus 278 vvD~dG-~IWVGT---~~gGLy~~d~~-g~~~~~~~~~~~~~~ilssp~V~~Il~DsdG~ 332 (626)
...++| .||+++ .++.|+.+|.. ++....... ...+..+....+|.
T Consensus 206 ~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~---------~~~~~~~~~s~dg~ 256 (391)
T 1l0q_A 206 AVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPV---------GPDPAGIAVTPDGK 256 (391)
T ss_dssp EECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEEC---------CSSEEEEEECTTSS
T ss_pred EECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEec---------CCCccEEEEccCCC
Confidence 666666 688887 57899999975 554443331 11234555666665
No 62
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.45 E-value=0.00017 Score=77.52 Aligned_cols=229 Identities=14% Similarity=0.099 Sum_probs=133.8
Q ss_pred CeEEecCCeEEEEE--CCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEcC-CeEEEEEcCC--eEEEEeC
Q 006913 82 APVHGGTGEVYIVA--ENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSS-SSVYINVKGR--ALFAFMT 156 (626)
Q Consensus 82 sp~iD~dG~IwVgT--~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~d-G~LwIgT~~g--GL~a~d~ 156 (626)
.+.+|.+|+||++. ++.|.++|++++.. ....... . ... +..+.+ +.||++...+ .|+.+++
T Consensus 135 ~la~d~~g~lyv~d~~~~~I~~id~~~g~~-----~~~~~~~------~-~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~ 201 (409)
T 3hrp_A 135 GIAAVGNNTVLAYQRDDPRVRLISVDDNKV-----TTVHPGF------K-GGK-PAVTKDKQRVYSIGWEGTHTVYVYMK 201 (409)
T ss_dssp EEEECSTTEEEEEETTTTEEEEEETTTTEE-----EEEEETC------C-BCB-CEECTTSSEEEEEBSSTTCEEEEEEG
T ss_pred EEEEeCCCCEEEEecCCCcEEEEECCCCEE-----EEeeccC------C-CCc-eeEecCCCcEEEEecCCCceEEEEEc
Confidence 45678899999987 47899999987632 1111110 1 111 333444 4577776644 7999997
Q ss_pred C-CcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcCCCeEEEEeCCCCeEEEEEcCC---CCCcc-e
Q 006913 157 H-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLS---SFDKA-F 231 (626)
Q Consensus 157 ~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~---s~~~v-~ 231 (626)
. +......+. .. . ... . ....+++++.++.||+...++.|+++|++++......... ..... .
T Consensus 202 ~~~~~~~~~g~----~~-~----~~~--~-~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~ 269 (409)
T 3hrp_A 202 ASGWAPTRIGQ----LG-S----TFS--G-KIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPG 269 (409)
T ss_dssp GGTTCEEEEEE----CC-T----TSC--S-CCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSC
T ss_pred CCCceeEEeee----cc-c----hhc--C-CcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCcc
Confidence 5 332111100 00 0 000 0 1133566643789999877778999999987665442211 11111 3
Q ss_pred -eeeeec-CCeEEEEEcCCCEEEEEECCCCcEEEEEecC---CC---------CCceeeEEEeeCCeEEEEEc--CCeEE
Q 006913 232 -TLTPGN-NGYLYVTIPVRALVLALDTSSGNILWHKSVG---PL---------GSAEYAPVVDSNGWISVGSL--DGLLY 295 (626)
Q Consensus 232 -sI~~D~-dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~---~l---------~~~~sspvvD~dG~IWVGT~--~gGLy 295 (626)
.++.+. +|+||++....+.++.++. +|......... .. -.....++++++|+||++.. ++.|.
T Consensus 270 ~~ia~~p~~g~lyv~d~~~~~I~~~~~-~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~ 348 (409)
T 3hrp_A 270 PYLIYYFVDSNFYMSDQNLSSVYKITP-DGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLR 348 (409)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEECT-TCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEE
T ss_pred ccEEEeCCCCEEEEEeCCCCEEEEEec-CCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEE
Confidence 677887 6899999877788999985 45543222111 00 01245678899999999975 56899
Q ss_pred EEc-CCCCEEEEeeccC----CCCcc--ccCceEEEEEEecCCcEEEE
Q 006913 296 SFS-PSGVLNKFSKSDT----SDSVI--QSSPYWFHLLGPSIGLKAIL 336 (626)
Q Consensus 296 ~~d-~~g~~~~~~~~~~----~~~~i--lssp~V~~Il~DsdG~IwI~ 336 (626)
+++ ++|.+........ .++.. ..-.....|..|.+|+||+.
T Consensus 349 ~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVa 396 (409)
T 3hrp_A 349 KLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIA 396 (409)
T ss_dssp EEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEE
T ss_pred EEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEE
Confidence 999 6776654433100 01000 00122457888999999964
No 63
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.42 E-value=0.00023 Score=72.73 Aligned_cols=217 Identities=11% Similarity=0.076 Sum_probs=126.8
Q ss_pred cCeEEecCCeEEEEE--CCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEcC-C--eEEEEe
Q 006913 81 TAPVHGGTGEVYIVA--ENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKG-R--ALFAFM 155 (626)
Q Consensus 81 ~sp~iD~dG~IwVgT--~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~~-g--GL~a~d 155 (626)
..+.+|.+|+||++. ++.|+++++++.. ...+.. ......+..+.+|+||++... + .|+.++
T Consensus 35 egia~~~~g~lyv~d~~~~~I~~~d~~g~~------~~~~~~-------~~~p~gia~~~dG~l~vad~~~~~~~v~~~d 101 (306)
T 2p4o_A 35 ENLASAPDGTIFVTNHEVGEIVSITPDGNQ------QIHATV-------EGKVSGLAFTSNGDLVATGWNADSIPVVSLV 101 (306)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEECTTCCE------EEEEEC-------SSEEEEEEECTTSCEEEEEECTTSCEEEEEE
T ss_pred ceEEECCCCCEEEEeCCCCeEEEECCCCce------EEEEeC-------CCCceeEEEcCCCcEEEEeccCCcceEEEEc
Confidence 356778889999987 6889999987642 111111 113344566788999998753 2 388888
Q ss_pred C-CCcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcC-CCeEEEEeCCCCeE-EEEEcC--------
Q 006913 156 T-HGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNT-QGELYSLSAHSPYF-NWIQDL-------- 224 (626)
Q Consensus 156 ~-~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~-~GgL~~ld~~tg~~-~w~~~~-------- 224 (626)
. +|++...... + . ..+...++... ++.+|+... .+.|+++|+.++.. .+....
T Consensus 102 ~~~g~~~~~~~~-----~------~----~~~~~g~~~~~-~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~ 165 (306)
T 2p4o_A 102 KSDGTVETLLTL-----P------D----AIFLNGITPLS-DTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSE 165 (306)
T ss_dssp CTTSCEEEEEEC-----T------T----CSCEEEEEESS-SSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTT
T ss_pred CCCCeEEEEEeC-----C------C----ccccCcccccC-CCcEEEEECCCCeEEEEeCCCCcEeEEEECCcccccccc
Confidence 5 5776432210 0 0 00111223343 677888764 78899999987643 232110
Q ss_pred CCCCcceeeeeecCCeEEEEEcCCCEEEEEECCC-CcE----EEEEecCCCCCceeeEEEeeCCeEEEEEc-CCeEEEEc
Q 006913 225 SSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSS-GNI----LWHKSVGPLGSAEYAPVVDSNGWISVGSL-DGLLYSFS 298 (626)
Q Consensus 225 ~s~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~t-G~~----~w~~~~~~l~~~~sspvvD~dG~IWVGT~-~gGLy~~d 298 (626)
........+..| .+.||++......++.++... |.. .+. ... ....+++|++|+||++.. ++.|.+|+
T Consensus 166 ~~~~~pngis~d-g~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~-~~~----~P~gi~vd~dG~l~va~~~~~~V~~~~ 239 (306)
T 2p4o_A 166 SVFPAANGLKRF-GNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFV-EQT----NIDDFAFDVEGNLYGATHIYNSVVRIA 239 (306)
T ss_dssp CCSCSEEEEEEE-TTEEEEEETTTTEEEEEEBCTTSCBCCCEEEE-ESC----CCSSEEEBTTCCEEEECBTTCCEEEEC
T ss_pred CCCCcCCCcCcC-CCEEEEEeCCCCEEEEEEeCCCCCCCccEEEe-ccC----CCCCeEECCCCCEEEEeCCCCeEEEEC
Confidence 111122334222 458999987677899888653 432 111 111 123478899999999985 46899999
Q ss_pred CCCCEEEEeeccCCCCccccCceEEEEEEe---cC-CcEEEEEe
Q 006913 299 PSGVLNKFSKSDTSDSVIQSSPYWFHLLGP---SI-GLKAILCL 338 (626)
Q Consensus 299 ~~g~~~~~~~~~~~~~~ilssp~V~~Il~D---sd-G~IwI~T~ 338 (626)
++|+........ .......++..+ .+ +.||+.+.
T Consensus 240 ~~G~~~~~~~~~------~~~~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 240 PDRSTTIIAQAE------QGVIGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp TTCCEEEEECGG------GTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred CCCCEEEEeecc------cccCCceEEEEecccCCCCEEEEECC
Confidence 988764332210 111223456554 44 67886553
No 64
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.39 E-value=0.00031 Score=75.45 Aligned_cols=238 Identities=11% Similarity=0.077 Sum_probs=138.2
Q ss_pred eeeeeEEeeCCEEEEEe--CCcEEEEcCC-CCEEEEEeCCCCCCcccCeEEecCCe-EEEEE-CC--eEEEEECCCCccc
Q 006913 38 RLSKPLIGEDGKIYACS--EKTLFAFESN-GTIAWSLDLDFTCNIGTAPVHGGTGE-VYIVA-EN--RVLKVDLLKIGTS 110 (626)
Q Consensus 38 ~~Sspvid~dG~IwIgS--dggL~a~d~~-G~~~W~~~~~~~~~i~~sp~iD~dG~-IwVgT-~g--gL~~id~~~~~~~ 110 (626)
.-..+++|.+|+||++. ++.|.++|.+ +.+...... . .... +.++.+|+ ||++. ++ .|+.+++.++..
T Consensus 132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~-~--~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~- 206 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPG-F--KGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWA- 206 (409)
T ss_dssp CEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEET-C--CBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTC-
T ss_pred CceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeecc-C--CCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCce-
Confidence 34566788899999987 3679999984 554321222 1 1223 67777776 66665 33 799999876421
Q ss_pred cceeEEEecCCCCCCCCCCeeEEEEEEc-CCeEEEEEcCCeEEEEeCC-CcEEEEECCcccccccccccccCCCCCcccc
Q 006913 111 ESATQVFYGTGSGKGGTGAIAGIAVSTS-SSSVYINVKGRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTS 188 (626)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~I~s~~~d~-dG~LwIgT~~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~s 188 (626)
........... ......+..+. +|.||++..++.|+.++++ +........ + .. ... ......
T Consensus 207 ----~~~~g~~~~~~--~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~-----~-~~---g~~-~~~P~~ 270 (409)
T 3hrp_A 207 ----PTRIGQLGSTF--SGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQL-----E-LS---GSL-GTNPGP 270 (409)
T ss_dssp ----EEEEEECCTTS--CSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEEC-----C-CC---SCC-CCSSCC
T ss_pred ----eEEeeeccchh--cCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecc-----c-cc---CCC-CCCccc
Confidence 11111000000 11122334455 8999997665669999986 543322100 0 00 000 000001
Q ss_pred ceEEEcCCCeEEEEcC-CCeEEEEeCCCCeEEEEEcCC---C----------CCcceeeeeecCCeEEEEEc-CCCEEEE
Q 006913 189 VPVIDQCEGSIYISNT-QGELYSLSAHSPYFNWIQDLS---S----------FDKAFTLTPGNNGYLYVTIP-VRALVLA 253 (626)
Q Consensus 189 spviD~~dG~LwIGT~-~GgL~~ld~~tg~~~w~~~~~---s----------~~~v~sI~~D~dG~LwVGT~-~gG~l~a 253 (626)
.+++++.++.||++.. ++.|++++.++. ........ + +.....++.|.+|+|||+.. .+..+..
T Consensus 271 ~ia~~p~~g~lyv~d~~~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~ 349 (409)
T 3hrp_A 271 YLIYYFVDSNFYMSDQNLSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRK 349 (409)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEE
T ss_pred cEEEeCCCCEEEEEeCCCCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEE
Confidence 4677753689999865 567999998874 33222111 0 23355788899999999987 7789999
Q ss_pred EECCCCcEEEEEecCC-C-----------CCceeeEEEeeCCeEEEEEcC-CeEEEE
Q 006913 254 LDTSSGNILWHKSVGP-L-----------GSAEYAPVVDSNGWISVGSLD-GLLYSF 297 (626)
Q Consensus 254 lD~~tG~~~w~~~~~~-l-----------~~~~sspvvD~dG~IWVGT~~-gGLy~~ 297 (626)
++..+|.+......+. . -.....+++|++|+|||+... +.|.++
T Consensus 350 ~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i 406 (409)
T 3hrp_A 350 LDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKY 406 (409)
T ss_dssp EETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEE
T ss_pred EECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEE
Confidence 9977887654332210 0 012456788988999998754 344444
No 65
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.26 E-value=0.0017 Score=68.27 Aligned_cols=224 Identities=15% Similarity=0.160 Sum_probs=137.0
Q ss_pred eeeEEeeCCEEEEEe--CCcEEEEcC-CCCEEEEEeCCCCCCcccCeEEecCCe-EEEEE--CCeEEEEECCCCccccce
Q 006913 40 SKPLIGEDGKIYACS--EKTLFAFES-NGTIAWSLDLDFTCNIGTAPVHGGTGE-VYIVA--ENRVLKVDLLKIGTSESA 113 (626)
Q Consensus 40 Sspvid~dG~IwIgS--dggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~dG~-IwVgT--~ggL~~id~~~~~~~~~~ 113 (626)
.......+|.+|++. ++.+..+|. +++..+.+.... .....+..+.+|. ++++. ++.|..+|..++.
T Consensus 173 ~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~----- 245 (433)
T 3bws_A 173 ETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTG--KWSKILLYDPIRDLVYCSNWISEDISVIDRKTKL----- 245 (433)
T ss_dssp EEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSS--SSEEEEEEETTTTEEEEEETTTTEEEEEETTTTE-----
T ss_pred eEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCC--CCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCc-----
Confidence 334555688888865 578999997 777776554322 2334556667766 55555 5789999987753
Q ss_pred eEEEecCCCCCCCCCCeeEEEEEEcCC-eEEEEEc--------CCeEEEEeCC-CcEEEEECCcccccccccccccCCCC
Q 006913 114 TQVFYGTGSGKGGTGAIAGIAVSTSSS-SVYINVK--------GRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVD 183 (626)
Q Consensus 114 ~~~~~~~~~~~~~~~~~I~s~~~d~dG-~LwIgT~--------~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~ 183 (626)
....+.. ...+..+....+| .|++++. ++.|+.+|.. ++....... .
T Consensus 246 ~~~~~~~-------~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~-----~----------- 302 (433)
T 3bws_A 246 EIRKTDK-------IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGP-----P----------- 302 (433)
T ss_dssp EEEECCC-------CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEE-----E-----------
T ss_pred EEEEecC-------CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccC-----C-----------
Confidence 1122111 1223444445555 6888774 5578899975 666543200 0
Q ss_pred CccccceEEEcCCCeEEEE-cCCCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCC-eEEEEEcC--------------
Q 006913 184 CYFTSVPVIDQCEGSIYIS-NTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNG-YLYVTIPV-------------- 247 (626)
Q Consensus 184 ~~i~sspviD~~dG~LwIG-T~~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG-~LwVGT~~-------------- 247 (626)
.. ...+..++.+..+|+. ..++.|..+|.++++........ ..+..++...+| .||++...
T Consensus 303 ~~-~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~ 379 (433)
T 3bws_A 303 GN-KRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPVF--DKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLV 379 (433)
T ss_dssp EC-EEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEECS--SSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSS
T ss_pred CC-cceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecCC--CCCCeEEEcCCCCEEEEEecCCCcccccccccccc
Confidence 00 1234455413367776 56888999999998877654422 235566777777 58887743
Q ss_pred CCEEEEEECCCCcEEEEEecCCCCCceeeEEEeeCC-eEEEEEc-CCeEEEEcC
Q 006913 248 RALVLALDTSSGNILWHKSVGPLGSAEYAPVVDSNG-WISVGSL-DGLLYSFSP 299 (626)
Q Consensus 248 gG~l~alD~~tG~~~w~~~~~~l~~~~sspvvD~dG-~IWVGT~-~gGLy~~d~ 299 (626)
.|.++.+|..+++........ .....+..+++| .|++++. ++.|..++.
T Consensus 380 dg~v~~~d~~~~~~~~~~~~~---~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~ 430 (433)
T 3bws_A 380 LGKVYVIDTTTDTVKEFWEAG---NQPTGLDVSPDNRYLVISDFLDHQIRVYRR 430 (433)
T ss_dssp CCEEEEEETTTTEEEEEEECS---SSEEEEEECTTSCEEEEEETTTTEEEEEEE
T ss_pred ceEEEEEECCCCcEEEEecCC---CCCceEEEcCCCCEEEEEECCCCeEEEEEe
Confidence 248999999899877655443 234556677676 4566664 677777754
No 66
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.24 E-value=0.0027 Score=65.58 Aligned_cols=236 Identities=11% Similarity=0.038 Sum_probs=138.3
Q ss_pred eeeeeEEeeCCEE-EEEe-CCcEEEEcCCCCEEEEEeCCCCCCcccCeEEecCCe-EEEEE-CCeEEEEECCCCccccce
Q 006913 38 RLSKPLIGEDGKI-YACS-EKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGE-VYIVA-ENRVLKVDLLKIGTSESA 113 (626)
Q Consensus 38 ~~Sspvid~dG~I-wIgS-dggL~a~d~~G~~~W~~~~~~~~~i~~sp~iD~dG~-IwVgT-~ggL~~id~~~~~~~~~~ 113 (626)
....+....+|.+ .+|+ ++.+..++.++.....+.... ..+.++....++. |+.++ ++.|..+|..++..
T Consensus 110 ~v~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~---- 183 (425)
T 1r5m_A 110 QVTCLAWSHDGNSIVTGVENGELRLWNKTGALLNVLNFHR--APIVSVKWNKDGTHIISMDVENVTILWNVISGTV---- 183 (425)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCC--SCEEEEEECTTSSEEEEEETTCCEEEEETTTTEE----
T ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeeccCCC--ccEEEEEECCCCCEEEEEecCCeEEEEECCCCcE----
Confidence 3444455456654 4455 566888887777665543221 2344556666676 44455 78899999877531
Q ss_pred eEEEecCCCCC---------CCCCCeeEEEEEEcCCeEEEEEcCCeEEEEeCC-CcEEEEECCcccccccccccccCCCC
Q 006913 114 TQVFYGTGSGK---------GGTGAIAGIAVSTSSSSVYINVKGRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVD 183 (626)
Q Consensus 114 ~~~~~~~~~~~---------~~~~~~I~s~~~d~dG~LwIgT~~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~ 183 (626)
...+...... ...+..+..+....++.+++++.++.|..+|.. ++....+.. . .
T Consensus 184 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~------------~---~ 247 (425)
T 1r5m_A 184 -MQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIG------------H---H 247 (425)
T ss_dssp -EEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECC------------C---S
T ss_pred -EEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeecc------------C---C
Confidence 1112111000 000001333334467888899888889999975 554433200 0 0
Q ss_pred CccccceEEEcCCCeEEEEcCCCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCCeEEEEEcCCCEEEEEECCCCcEEE
Q 006913 184 CYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILW 263 (626)
Q Consensus 184 ~~i~sspviD~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~tG~~~w 263 (626)
.. ...+...+.+..|+.++.++.|..+|.++++....... ....+.++....+|.++.++ ..+.+..+|..+++...
T Consensus 248 ~~-i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~ 324 (425)
T 1r5m_A 248 GP-ISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYG-HSQSIVSASWVGDDKVISCS-MDGSVRLWSLKQNTLLA 324 (425)
T ss_dssp SC-EEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECC-CSSCEEEEEEETTTEEEEEE-TTSEEEEEETTTTEEEE
T ss_pred Cc-eEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecC-CCccEEEEEECCCCEEEEEe-CCCcEEEEECCCCcEeE
Confidence 11 13344554244677888888899999888665443321 12245666666777666666 45789999998888776
Q ss_pred EEecCCCCCceeeEEEeeCC-eEEEEEcCCeEEEEcCC
Q 006913 264 HKSVGPLGSAEYAPVVDSNG-WISVGSLDGLLYSFSPS 300 (626)
Q Consensus 264 ~~~~~~l~~~~sspvvD~dG-~IWVGT~~gGLy~~d~~ 300 (626)
...... ..+..+...++| .|.+|+.++.|..++..
T Consensus 325 ~~~~~~--~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~ 360 (425)
T 1r5m_A 325 LSIVDG--VPIFAGRISQDGQKYAVAFMDGQVNVYDLK 360 (425)
T ss_dssp EEECTT--CCEEEEEECTTSSEEEEEETTSCEEEEECH
T ss_pred ecccCC--ccEEEEEEcCCCCEEEEEECCCeEEEEECC
Confidence 654321 234556666565 57778888889999864
No 67
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.21 E-value=0.0012 Score=66.20 Aligned_cols=228 Identities=11% Similarity=0.030 Sum_probs=123.9
Q ss_pred EEEEe-CCcEEEEcC-CCCEEEEEeCCCCCCcccCeEEecCC-eEEEEE--CCeEEEEECCCCccccceeEEEecCCCCC
Q 006913 50 IYACS-EKTLFAFES-NGTIAWSLDLDFTCNIGTAPVHGGTG-EVYIVA--ENRVLKVDLLKIGTSESATQVFYGTGSGK 124 (626)
Q Consensus 50 IwIgS-dggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~dG-~IwVgT--~ggL~~id~~~~~~~~~~~~~~~~~~~~~ 124 (626)
+..++ ++.|..+|. +++..+.+..+........+..+.+| .+|++. ++.|..+|..++.. ...+.....
T Consensus 4 ~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~-----~~~~~~~~~- 77 (337)
T 1pby_B 4 ILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGET-----LGRIDLSTP- 77 (337)
T ss_dssp EEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCE-----EEEEECCBT-
T ss_pred EEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCe-----EeeEEcCCc-
Confidence 33444 678999998 78777666554310023466777888 577776 57899999887642 211211100
Q ss_pred CCCCCeeEEEEEEcCC-eEEEEE------------cCCeEEEEeCC-CcEEEEECCcccccccccccccCCCCCccccce
Q 006913 125 GGTGAIAGIAVSTSSS-SVYINV------------KGRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVP 190 (626)
Q Consensus 125 ~~~~~~I~s~~~d~dG-~LwIgT------------~~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~ssp 190 (626)
...+..+..+....+| .||++. .++.|..+|.. ++..+.... + .. ...+
T Consensus 78 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-----~-----------~~-~~~~ 140 (337)
T 1pby_B 78 EERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-----P-----------RQ-ITML 140 (337)
T ss_dssp TEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-----C-----------SS-CCCE
T ss_pred ccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-----C-----------CC-ccee
Confidence 0000011122334555 688875 35789999975 666554310 0 00 1234
Q ss_pred EEEcCCCeEEEEcCCCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCC-eEEEEEcCCC--------------------
Q 006913 191 VIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNG-YLYVTIPVRA-------------------- 249 (626)
Q Consensus 191 viD~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG-~LwVGT~~gG-------------------- 249 (626)
...+.+..||++ ++.|+.+|.++++...............+ ..|| .||+....++
T Consensus 141 ~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~--s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (337)
T 1pby_B 141 AWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYA--QPDVLAVWNQHESSGVMATPFYTARKDIDPADPTA 216 (337)
T ss_dssp EECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBC--CCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGG
T ss_pred EECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCcee--CCCccEEeeeccCCCceeeeeeccccccccccccc
Confidence 555423448887 46799999999887655443221111111 2223 3444332111
Q ss_pred ---EEEEEECCCCcEEEEEecCCCCCceeeEEEeeCC-eEEEEEcCCeEEEEcCC-CCEEEEe
Q 006913 250 ---LVLALDTSSGNILWHKSVGPLGSAEYAPVVDSNG-WISVGSLDGLLYSFSPS-GVLNKFS 307 (626)
Q Consensus 250 ---~l~alD~~tG~~~w~~~~~~l~~~~sspvvD~dG-~IWVGT~~gGLy~~d~~-g~~~~~~ 307 (626)
.++.+|..+++.. .....+.......+..+++| .+|++ ++.|+.+|.. ++.....
T Consensus 217 ~~~~v~~~d~~~~~~~-~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~ 276 (337)
T 1pby_B 217 YRTGLLTMDLETGEMA-MREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRV 276 (337)
T ss_dssp EEEEEEEEETTTCCEE-EEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEE
T ss_pred cccceEEEeCCCCCce-EeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCccee
Confidence 4678898888775 22222111223446677676 46666 5899999975 5554443
No 68
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.20 E-value=0.0063 Score=60.13 Aligned_cols=256 Identities=12% Similarity=0.031 Sum_probs=145.3
Q ss_pred CceeeeeEEeeCCEEEEEe-CCcEEEEcC-CCCEEEEEeCCCCCCcccCeEEecCCeEEE-EE-CCeEEEEECCCCcccc
Q 006913 36 AFRLSKPLIGEDGKIYACS-EKTLFAFES-NGTIAWSLDLDFTCNIGTAPVHGGTGEVYI-VA-ENRVLKVDLLKIGTSE 111 (626)
Q Consensus 36 ~~~~Sspvid~dG~IwIgS-dggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~dG~IwV-gT-~ggL~~id~~~~~~~~ 111 (626)
..+.+-.. ..++.|..++ ++.+..+|. ++.......... ..+.++....++.+.+ ++ ++.+..++........
T Consensus 19 ~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~ 95 (313)
T 3odt_A 19 QDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQ--GFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGED 95 (313)
T ss_dssp SCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECS--SCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSC
T ss_pred CCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCC--ccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCC
Confidence 34444333 3455666676 566888886 554433332211 2344555666776544 45 6777777765432100
Q ss_pred ceeEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEcCCeEEEEeCCCcEEEEECCcccccccccccccCCCCCccccceE
Q 006913 112 SATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPV 191 (626)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~~gGL~a~d~~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspv 191 (626)
....+. .... .+..+.. .++.+..++.++.+..+| .++....... . ...+ ....
T Consensus 96 --~~~~~~-----~~~~-~i~~~~~-~~~~l~~~~~d~~i~~~d-~~~~~~~~~~------------~---~~~v-~~~~ 149 (313)
T 3odt_A 96 --PLYTLI-----GHQG-NVCSLSF-QDGVVISGSWDKTAKVWK-EGSLVYNLQA------------H---NASV-WDAK 149 (313)
T ss_dssp --C-CEEC-----CCSS-CEEEEEE-ETTEEEEEETTSEEEEEE-TTEEEEEEEC------------C---SSCE-EEEE
T ss_pred --cccchh-----hccc-CEEEEEe-cCCEEEEEeCCCCEEEEc-CCcEEEeccc------------C---CCce-eEEE
Confidence 011111 1112 3333333 566788888888888888 4444443200 0 0111 1122
Q ss_pred E-EcCCCeEEEEcCCCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCCeEEEEEcCCCEEEEEECCCCcEEEEEecCCC
Q 006913 192 I-DQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPL 270 (626)
Q Consensus 192 i-D~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l 270 (626)
. ...++.+..++.++.|..+|.. +............+.++....++.+.+++. ++.+..+|..+++........
T Consensus 150 ~~~~~~~~l~~~~~d~~i~i~d~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-dg~i~i~d~~~~~~~~~~~~~-- 224 (313)
T 3odt_A 150 VVSFSENKFLTASADKTIKLWQND--KVIKTFSGIHNDVVRHLAVVDDGHFISCSN-DGLIKLVDMHTGDVLRTYEGH-- 224 (313)
T ss_dssp EEETTTTEEEEEETTSCEEEEETT--EEEEEECSSCSSCEEEEEEEETTEEEEEET-TSEEEEEETTTCCEEEEEECC--
T ss_pred EccCCCCEEEEEECCCCEEEEecC--ceEEEEeccCcccEEEEEEcCCCeEEEccC-CCeEEEEECCchhhhhhhhcC--
Confidence 2 2126778888888999999843 333222221223456667777888777774 578999999989887665432
Q ss_pred CCceeeEEEeeCCeEEEEEcCCeEEEEcCC-CCEEEEeeccCCCCccccCceEEEEEEecCCcE
Q 006913 271 GSAEYAPVVDSNGWISVGSLDGLLYSFSPS-GVLNKFSKSDTSDSVIQSSPYWFHLLGPSIGLK 333 (626)
Q Consensus 271 ~~~~sspvvD~dG~IWVGT~~gGLy~~d~~-g~~~~~~~~~~~~~~ilssp~V~~Il~DsdG~I 333 (626)
...+..+...++|.+..|+.++.|..+|.. ++....... ....|.++....+|.+
T Consensus 225 ~~~i~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~--------~~~~i~~~~~~~~~~~ 280 (313)
T 3odt_A 225 ESFVYCIKLLPNGDIVSCGEDRTVRIWSKENGSLKQVITL--------PAISIWSVDCMSNGDI 280 (313)
T ss_dssp SSCEEEEEECTTSCEEEEETTSEEEEECTTTCCEEEEEEC--------SSSCEEEEEECTTSCE
T ss_pred CceEEEEEEecCCCEEEEecCCEEEEEECCCCceeEEEec--------cCceEEEEEEccCCCE
Confidence 123556777778899999999999999964 665544331 1223555666666664
No 69
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.18 E-value=0.0035 Score=64.82 Aligned_cols=230 Identities=13% Similarity=0.136 Sum_probs=140.7
Q ss_pred eeeeEEeeCCE-EEEEe--CCcEEEEcC-CCCEEEEEeCCCCCCcccCeEEecCCe-EEEEE--CCeEEEEECCCCcccc
Q 006913 39 LSKPLIGEDGK-IYACS--EKTLFAFES-NGTIAWSLDLDFTCNIGTAPVHGGTGE-VYIVA--ENRVLKVDLLKIGTSE 111 (626)
Q Consensus 39 ~Sspvid~dG~-IwIgS--dggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~dG~-IwVgT--~ggL~~id~~~~~~~~ 111 (626)
...+....+|. |+++. ++.|..+|. +++..+.+.... ....+..+.+|+ |+++. ++.|..+|..++..
T Consensus 34 ~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~---~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~-- 108 (391)
T 1l0q_A 34 PMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS---SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTV-- 108 (391)
T ss_dssp EEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS---SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE--
T ss_pred cceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC---CccceEECCCCCEEEEEECCCCEEEEEECCCCeE--
Confidence 45566666775 65653 678999997 788776665432 234556666766 66665 58899999987631
Q ss_pred ceeEEEecCCCCCCCCCCeeEEEEEEcCC-eEEEEE-cCCeEEEEeCC-CcEEEEECCcccccccccccccCCCCCcccc
Q 006913 112 SATQVFYGTGSGKGGTGAIAGIAVSTSSS-SVYINV-KGRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTS 188 (626)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~I~s~~~d~dG-~LwIgT-~~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~s 188 (626)
...+.. ...+..+....+| .||+.. .++.|+.+|.. ++....... + .. ..
T Consensus 109 ---~~~~~~-------~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~-----~-----------~~-~~ 161 (391)
T 1l0q_A 109 ---AGTVKT-------GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSV-----G-----------RS-PK 161 (391)
T ss_dssp ---EEEEEC-------SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC-----C-----------SS-EE
T ss_pred ---EEEEeC-------CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEec-----C-----------CC-cc
Confidence 222211 1123334444555 475554 46788999975 766554310 0 01 12
Q ss_pred ceEEEcCCCeEEEE-cCCCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCC-eEEEEEc--CCCEEEEEECCCCcEEEE
Q 006913 189 VPVIDQCEGSIYIS-NTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNG-YLYVTIP--VRALVLALDTSSGNILWH 264 (626)
Q Consensus 189 spviD~~dG~LwIG-T~~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG-~LwVGT~--~gG~l~alD~~tG~~~w~ 264 (626)
.+...+.+..||+. ..++.|+.+|.++++........ ..+..+....+| .||++.. ..+.+..+|..+++....
T Consensus 162 ~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~--~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~ 239 (391)
T 1l0q_A 162 GIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVE--AAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITAR 239 (391)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS--SEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEE
T ss_pred eEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecC--CCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEE
Confidence 34455424467665 45678999999998776544322 234455666666 6787764 357899999988887765
Q ss_pred EecCCCCCceeeEEEeeCC-eEEEE-EcCCeEEEEcCC-CCEEE
Q 006913 265 KSVGPLGSAEYAPVVDSNG-WISVG-SLDGLLYSFSPS-GVLNK 305 (626)
Q Consensus 265 ~~~~~l~~~~sspvvD~dG-~IWVG-T~~gGLy~~d~~-g~~~~ 305 (626)
..... ....+..+++| .||++ ..++.|..+|.. ++...
T Consensus 240 ~~~~~---~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~ 280 (391)
T 1l0q_A 240 IPVGP---DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITA 280 (391)
T ss_dssp EECCS---SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EecCC---CccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEE
Confidence 54432 23456677677 57776 457889999975 55544
No 70
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.18 E-value=0.0018 Score=64.82 Aligned_cols=231 Identities=13% Similarity=0.107 Sum_probs=133.2
Q ss_pred eeeeEEeeCC-EEEEEe--CCcEEEEcC-CCCEEEEEeCCCCC---CcccCeEEecCC-eEEEEE-------------CC
Q 006913 39 LSKPLIGEDG-KIYACS--EKTLFAFES-NGTIAWSLDLDFTC---NIGTAPVHGGTG-EVYIVA-------------EN 97 (626)
Q Consensus 39 ~Sspvid~dG-~IwIgS--dggL~a~d~-~G~~~W~~~~~~~~---~i~~sp~iD~dG-~IwVgT-------------~g 97 (626)
...+.++.+| .+|++. ++.|+.+|. +++..+.+...... .....+..+.+| .+|++. ++
T Consensus 36 ~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~ 115 (337)
T 1pby_B 36 PMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPT 115 (337)
T ss_dssp CCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCC
T ss_pred ccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCc
Confidence 3456676777 677765 457999998 78877666543200 023456677777 577773 47
Q ss_pred eEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEcCCe-EEEEEcCCeEEEEeCC-CcEEEEECCccccccccc
Q 006913 98 RVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSS-VYINVKGRALFAFMTH-GQLLWSAGPVLDQLGYRQ 175 (626)
Q Consensus 98 gL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~-LwIgT~~gGL~a~d~~-G~~~w~~~~~~~~~~~~~ 175 (626)
.|+.+|..++.. ...+... ..+..+....+|+ |+++ ++.|+.+|.. ++....... ....
T Consensus 116 ~i~v~d~~~~~~-----~~~~~~~-------~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~--~~~~--- 176 (337)
T 1pby_B 116 RVALYDAETLSR-----RKAFEAP-------RQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPI--QSWE--- 176 (337)
T ss_dssp EEEEEETTTTEE-----EEEEECC-------SSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECS--TTTT---
T ss_pred eEEEEECCCCcE-----EEEEeCC-------CCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeec--cccC---
Confidence 899999877531 2222111 1112233445555 7776 5679999975 766554311 0000
Q ss_pred ccccCCCCCccccceEEEcCCCeEEEEcC--------------CC----------eEEEEeCCCCeEEEEEcCC-CCCcc
Q 006913 176 GCTKTDVDCYFTSVPVIDQCEGSIYISNT--------------QG----------ELYSLSAHSPYFNWIQDLS-SFDKA 230 (626)
Q Consensus 176 ~~~~~l~~~~i~sspviD~~dG~LwIGT~--------------~G----------gL~~ld~~tg~~~w~~~~~-s~~~v 230 (626)
.. . ...+.+..||+... .+ .|+.+|.++++.. ..... ....+
T Consensus 177 ---~~-----~----~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~~~~~~~~~~~ 243 (337)
T 1pby_B 177 ---AE-----T----YAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA-MREVRIMDVFY 243 (337)
T ss_dssp ---TT-----T----BCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-EEEEEECSSCE
T ss_pred ---CC-----c----eeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce-EeecCCCCCce
Confidence 00 0 00100222333221 11 4789999988775 22211 11233
Q ss_pred eeeeeecCC-eEEEEEcCCCEEEEEECCCCcEEEEEecCCCCCceeeEEEeeCC-eEEEEEcCCeEEEEcCC-CCEEEEe
Q 006913 231 FTLTPGNNG-YLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPVVDSNG-WISVGSLDGLLYSFSPS-GVLNKFS 307 (626)
Q Consensus 231 ~sI~~D~dG-~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~~~sspvvD~dG-~IWVGT~~gGLy~~d~~-g~~~~~~ 307 (626)
..+..+.|| .||++ .+.++.+|..+++.......+. ....+..+++| .||++..++.|..+|.. ++.....
T Consensus 244 ~~~~~s~dg~~l~~~---~~~v~~~d~~~~~~~~~~~~~~---~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~ 317 (337)
T 1pby_B 244 FSTAVNPAKTRAFGA---YNVLESFDLEKNASIKRVPLPH---SYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQV 317 (337)
T ss_dssp EEEEECTTSSEEEEE---ESEEEEEETTTTEEEEEEECSS---CCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEE
T ss_pred eeEEECCCCCEEEEe---CCeEEEEECCCCcCcceecCCC---ceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEE
Confidence 456666677 57776 2688899999998876655431 23446677676 58998888899999974 6655543
No 71
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.17 E-value=0.0026 Score=63.11 Aligned_cols=198 Identities=11% Similarity=0.016 Sum_probs=119.6
Q ss_pred eeeEEee-CCEEEEEe--CCcEEEEcCCCCEEEEEeCCCCCCcccCeEEec-CCeEEEEE--CCeEEEEECCCCccccce
Q 006913 40 SKPLIGE-DGKIYACS--EKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGG-TGEVYIVA--ENRVLKVDLLKIGTSESA 113 (626)
Q Consensus 40 Sspvid~-dG~IwIgS--dggL~a~d~~G~~~W~~~~~~~~~i~~sp~iD~-dG~IwVgT--~ggL~~id~~~~~~~~~~ 113 (626)
..+++|. ++.||++. .+.+++++.+|.......... ......+.+|. .+.||++. .+.|.+++.++..
T Consensus 39 ~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~-~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~----- 112 (267)
T 1npe_A 39 IGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQD-LGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQ----- 112 (267)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTT-CCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-----
T ss_pred EEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECC-CCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCC-----
Confidence 4566775 67899986 457999998554221121111 11234567776 57899987 5789999987532
Q ss_pred eEEEecCCCCCCCCCCeeEEEEEEc-CCeEEEEEcC---CeEEEEeCCCcEEEEECCcccccccccccccCCCCCccccc
Q 006913 114 TQVFYGTGSGKGGTGAIAGIAVSTS-SSSVYINVKG---RALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSV 189 (626)
Q Consensus 114 ~~~~~~~~~~~~~~~~~I~s~~~d~-dG~LwIgT~~---gGL~a~d~~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~ss 189 (626)
........ .... ..+..+. +++||++... +.|++++.+|...-... .. .. .....
T Consensus 113 ~~~~~~~~-----~~~P-~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~--------~~----~~---~~P~g 171 (267)
T 1npe_A 113 RRVLFDTG-----LVNP-RGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILA--------QD----NL---GLPNG 171 (267)
T ss_dssp CEEEECSS-----CSSE-EEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEE--------CT----TC---SCEEE
T ss_pred EEEEEECC-----CCCc-cEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEE--------EC----CC---CCCcE
Confidence 11221110 0112 3344565 7899998754 56888888764321110 00 00 01234
Q ss_pred eEEEcCCCeEEEEcC-CCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCCeEEEEEcCCCEEEEEECCCCcEEEEEec
Q 006913 190 PVIDQCEGSIYISNT-QGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSV 267 (626)
Q Consensus 190 pviD~~dG~LwIGT~-~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~ 267 (626)
+++|..++.||++.. .+.|++++.+++....... .......++.| ++.||++...++.+..+|+.+|+..-....
T Consensus 172 ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~--~~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g~~~~~i~~ 247 (267)
T 1npe_A 172 LTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLE--GLQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISKEMDTFHP 247 (267)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEE--CCCSEEEEEEE-TTEEEEEETTTTEEEEEETTTTEEEEEECC
T ss_pred EEEcCCCCEEEEEECCCCEEEEEecCCCceEEEec--CCCCceEEEEe-CCEEEEEECCCCeEEEEeCCCCCceEEEcc
Confidence 567753578998876 4689999998754433222 12234566777 789999987778999999988987655443
No 72
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.15 E-value=0.0074 Score=62.23 Aligned_cols=209 Identities=8% Similarity=-0.072 Sum_probs=117.8
Q ss_pred ccCeEEecCCeEEE-EE-CCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEcCC-eEEEEEcCCeEEEEeC
Q 006913 80 GTAPVHGGTGEVYI-VA-ENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSS-SVYINVKGRALFAFMT 156 (626)
Q Consensus 80 ~~sp~iD~dG~IwV-gT-~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG-~LwIgT~~gGL~a~d~ 156 (626)
+.++....+|.+.+ ++ ++.|..++..+. ....+.. . ...+..+....++ .|+.++.++.+..+|.
T Consensus 111 v~~~~~s~~~~~l~~~~~dg~i~i~~~~~~------~~~~~~~-----~-~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~ 178 (425)
T 1r5m_A 111 VTCLAWSHDGNSIVTGVENGELRLWNKTGA------LLNVLNF-----H-RAPIVSVKWNKDGTHIISMDVENVTILWNV 178 (425)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTSC------EEEEECC-----C-CSCEEEEEECTTSSEEEEEETTCCEEEEET
T ss_pred eEEEEEcCCCCEEEEEeCCCeEEEEeCCCC------eeeeccC-----C-CccEEEEEECCCCCEEEEEecCCeEEEEEC
Confidence 44555666776444 45 677888884442 1222211 1 1234444444444 5777788888999997
Q ss_pred C-CcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcCCCeEEEEeCCCCeEEEEEcCCCCCcceeeee
Q 006913 157 H-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTP 235 (626)
Q Consensus 157 ~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~ 235 (626)
. ++....+...... ..................+...+ ++.+++++.++.|+.+|.++++....... ....+.++..
T Consensus 179 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~i~~~d~~~~~~~~~~~~-~~~~i~~~~~ 255 (425)
T 1r5m_A 179 ISGTVMQHFELKETG-GSSINAENHSGDGSLGVDVEWVD-DDKFVIPGPKGAIFVYQITEKTPTGKLIG-HHGPISVLEF 255 (425)
T ss_dssp TTTEEEEEECCC----------------CCCBSCCEEEE-TTEEEEECGGGCEEEEETTCSSCSEEECC-CSSCEEEEEE
T ss_pred CCCcEEEEeeccccC-ccceeeccccCCcceeeEEEEcC-CCEEEEEcCCCeEEEEEcCCCceeeeecc-CCCceEEEEE
Confidence 4 7665543110000 00000000000000023344454 78899999999999999988765443321 1234556666
Q ss_pred ecCC-eEEEEEcCCCEEEEEECCCCcEEEEEecCCCCCceeeEEEeeCCeEEEEEcCCeEEEEcCC-CCEEEE
Q 006913 236 GNNG-YLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPVVDSNGWISVGSLDGLLYSFSPS-GVLNKF 306 (626)
Q Consensus 236 D~dG-~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~~~sspvvD~dG~IWVGT~~gGLy~~d~~-g~~~~~ 306 (626)
..++ .|.+++ ..+.+..+|..+++........ ...+..+...+++.++.++.++.|..+|.. ++....
T Consensus 256 ~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~--~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 325 (425)
T 1r5m_A 256 NDTNKLLLSAS-DDGTLRIWHGGNGNSQNCFYGH--SQSIVSASWVGDDKVISCSMDGSVRLWSLKQNTLLAL 325 (425)
T ss_dssp ETTTTEEEEEE-TTSCEEEECSSSBSCSEEECCC--SSCEEEEEEETTTEEEEEETTSEEEEEETTTTEEEEE
T ss_pred CCCCCEEEEEc-CCCEEEEEECCCCccceEecCC--CccEEEEEECCCCEEEEEeCCCcEEEEECCCCcEeEe
Confidence 6666 455555 4567888888777665544322 123455677777888889999999999975 554443
No 73
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.10 E-value=0.0068 Score=59.99 Aligned_cols=222 Identities=7% Similarity=-0.067 Sum_probs=128.5
Q ss_pred EEEEeCCcEEEEcCCCCE--------EEEEeCCCCCCcccCeEEec-CCeEEEEE--CCeEEEEECCCCccccceeEEEe
Q 006913 50 IYACSEKTLFAFESNGTI--------AWSLDLDFTCNIGTAPVHGG-TGEVYIVA--ENRVLKVDLLKIGTSESATQVFY 118 (626)
Q Consensus 50 IwIgSdggL~a~d~~G~~--------~W~~~~~~~~~i~~sp~iD~-dG~IwVgT--~ggL~~id~~~~~~~~~~~~~~~ 118 (626)
||++..+.+++++.+|.. ...... .....+.+|. ++.||++. .+.|+++++++... ....
T Consensus 4 l~~~~~~~I~~~~~~g~~~~~~~~~~~~~~~~----~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~-----~~~~ 74 (267)
T 1npe_A 4 LLFAQTGKIERLPLERNTMKKTEAKAFLHIPA----KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEP-----TTII 74 (267)
T ss_dssp EEEEEEEEEEEEEESSSCBCGGGCEEEEEEEE----EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCC-----EEEE
T ss_pred EEEEcCCeEEEEEecCcccccccceeeecCCC----CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCc-----EEEE
Confidence 555555567777764431 111110 1123566776 57899987 57899999876521 1111
Q ss_pred cCCCCCCCCCCeeEEEEEEc-CCeEEEEEcC-CeEEEEeCCCcEEEEECCcccccccccccccCCCCCccccceEEEcCC
Q 006913 119 GTGSGKGGTGAIAGIAVSTS-SSSVYINVKG-RALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCE 196 (626)
Q Consensus 119 ~~~~~~~~~~~~I~s~~~d~-dG~LwIgT~~-gGL~a~d~~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~d 196 (626)
.. ... ....+..+. +++||++... +.|..++.+|...-... .. .. .....+++|+.+
T Consensus 75 ~~-----~~~-~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~--------~~----~~---~~P~~i~vd~~~ 133 (267)
T 1npe_A 75 RQ-----DLG-SPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLF--------DT----GL---VNPRGIVTDPVR 133 (267)
T ss_dssp CT-----TCC-CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE--------CS----SC---SSEEEEEEETTT
T ss_pred EC-----CCC-CccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEE--------EC----CC---CCccEEEEeeCC
Confidence 11 001 223344554 6899998654 67888988754321110 00 00 011335677536
Q ss_pred CeEEEEcCC---CeEEEEeCCCCeEEEEEcCCCCCcceeeeeecC-CeEEEEEcCCCEEEEEECCCCcEEEEEecCCCCC
Q 006913 197 GSIYISNTQ---GELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNN-GYLYVTIPVRALVLALDTSSGNILWHKSVGPLGS 272 (626)
Q Consensus 197 G~LwIGT~~---GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~d-G~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~ 272 (626)
+.||++... +.|++++.++......... .......++.|.+ ++||++....+.+..+|..++....... . ..
T Consensus 134 g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~-~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~-~--~~ 209 (267)
T 1npe_A 134 GNLYWTDWNRDNPKIETSHMDGTNRRILAQD-NLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLE-G--LQ 209 (267)
T ss_dssp TEEEEEECCSSSCEEEEEETTSCCCEEEECT-TCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEE-C--CC
T ss_pred CEEEEEECCCCCcEEEEEecCCCCcEEEEEC-CCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEec-C--CC
Confidence 899998753 5788988876443222211 2233556788874 6899998777899999975433322222 1 11
Q ss_pred ceeeEEEeeCCeEEEEEc-CCeEEEEcCC-CCEEEE
Q 006913 273 AEYAPVVDSNGWISVGSL-DGLLYSFSPS-GVLNKF 306 (626)
Q Consensus 273 ~~sspvvD~dG~IWVGT~-~gGLy~~d~~-g~~~~~ 306 (626)
....+..| ++.||++.. ++.|+++++. |+....
T Consensus 210 ~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g~~~~~ 244 (267)
T 1npe_A 210 YPFAVTSY-GKNLYYTDWKTNSVIAMDLAISKEMDT 244 (267)
T ss_dssp SEEEEEEE-TTEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CceEEEEe-CCEEEEEECCCCeEEEEeCCCCCceEE
Confidence 23446667 789999885 4689999985 665443
No 74
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.10 E-value=0.011 Score=59.01 Aligned_cols=236 Identities=11% Similarity=-0.011 Sum_probs=132.7
Q ss_pred eeeeEEeeCCEEEE-EeCCcEEEEcC-CCCE---EEEEeCCCCCCcccCeEEecCCe-EEEEE-CCeEEEEECCCCcccc
Q 006913 39 LSKPLIGEDGKIYA-CSEKTLFAFES-NGTI---AWSLDLDFTCNIGTAPVHGGTGE-VYIVA-ENRVLKVDLLKIGTSE 111 (626)
Q Consensus 39 ~Sspvid~dG~IwI-gSdggL~a~d~-~G~~---~W~~~~~~~~~i~~sp~iD~dG~-IwVgT-~ggL~~id~~~~~~~~ 111 (626)
...+....+|.+.+ ++++.+..++. ++.. ............+.++....+++ +++++ ++.|..++..++..
T Consensus 54 v~~~~~~~~~~~l~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~-- 131 (337)
T 1gxr_A 54 VCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTP-- 131 (337)
T ss_dssp CCEEEECSSSSEEEEECBSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC----
T ss_pred eEEEEEecCCcEEEEcCCCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCc--
Confidence 34445545665544 45667778876 3321 11111111112344555666776 44555 67888899876531
Q ss_pred ceeEEEecCCCCCCCCCCeeEEEEEEcC-CeEEEEEcCCeEEEEeCC-CcEEEEECCcccccccccccccCCCCCccccc
Q 006913 112 SATQVFYGTGSGKGGTGAIAGIAVSTSS-SSVYINVKGRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSV 189 (626)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~I~s~~~d~d-G~LwIgT~~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~ss 189 (626)
.....+.. . ...+..+....+ ..|+.++.++.+..+|.. ++....... + ... ...
T Consensus 132 -~~~~~~~~-----~-~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~------------~---~~~-i~~ 188 (337)
T 1gxr_A 132 -RIKAELTS-----S-APACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG------------H---TDG-ASC 188 (337)
T ss_dssp -EEEEEEEC-----S-SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC------------C---SSC-EEE
T ss_pred -ceeeeccc-----C-CCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeec------------c---cCc-eEE
Confidence 01111111 1 123344333434 467778888889999975 665544310 0 011 133
Q ss_pred eEEEcCCCeEEEEcCCCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCCe-EEEEEcCCCEEEEEECCCCcEEEEEecC
Q 006913 190 PVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGY-LYVTIPVRALVLALDTSSGNILWHKSVG 268 (626)
Q Consensus 190 pviD~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG~-LwVGT~~gG~l~alD~~tG~~~w~~~~~ 268 (626)
+...+.+..|+.++.++.|..+|.++++........ ..+.++....+|. |.+++ ..+.+..+|..+++........
T Consensus 189 ~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~--~~v~~~~~s~~~~~l~~~~-~~~~i~~~~~~~~~~~~~~~~~ 265 (337)
T 1gxr_A 189 IDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFT--SQIFSLGYCPTGEWLAVGM-ESSNVEVLHVNKPDKYQLHLHE 265 (337)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECS--SCEEEEEECTTSSEEEEEE-TTSCEEEEETTSSCEEEECCCS
T ss_pred EEECCCCCEEEEEecCCcEEEEECCCCceEeeecCC--CceEEEEECCCCCEEEEEc-CCCcEEEEECCCCCeEEEcCCc
Confidence 444432456788888999999999988776554322 2345566666664 55555 4578888898887764322211
Q ss_pred CCCCceeeEEEeeCCe-EEEEEcCCeEEEEcCC-CCEEE
Q 006913 269 PLGSAEYAPVVDSNGW-ISVGSLDGLLYSFSPS-GVLNK 305 (626)
Q Consensus 269 ~l~~~~sspvvD~dG~-IWVGT~~gGLy~~d~~-g~~~~ 305 (626)
..+..+...++|. +..++.++.|..++.. ++...
T Consensus 266 ---~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~ 301 (337)
T 1gxr_A 266 ---SCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIF 301 (337)
T ss_dssp ---SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred ---cceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEE
Confidence 2345566666654 7777888889999964 55543
No 75
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.08 E-value=0.018 Score=60.98 Aligned_cols=246 Identities=9% Similarity=0.043 Sum_probs=137.6
Q ss_pred eeeeeEEeeCCEEEEEe-CCcEEEEcC-CCCEEEEEeCCCCCCcccCeEEecCCeEEEEE-CCeEEEEECCCCcccccee
Q 006913 38 RLSKPLIGEDGKIYACS-EKTLFAFES-NGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVA-ENRVLKVDLLKIGTSESAT 114 (626)
Q Consensus 38 ~~Sspvid~dG~IwIgS-dggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~dG~IwVgT-~ggL~~id~~~~~~~~~~~ 114 (626)
+.+.... .++.|..|+ ++.+..+|. +++..+.+.... ..+.++....++.+..|+ ++.|...|..++. .
T Consensus 124 v~~~~~~-~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~--~~V~~l~~~~~~~l~s~s~dg~i~vwd~~~~~-----~ 195 (464)
T 3v7d_B 124 VITCLQF-EDNYVITGADDKMIRVYDSINKKFLLQLSGHD--GGVWALKYAHGGILVSGSTDRTVRVWDIKKGC-----C 195 (464)
T ss_dssp CEEEEEE-ETTEEEEEETTSCEEEEETTTTEEEEEECCCS--SCEEEEEECSTTEEEEEETTSCEEEEETTTTE-----E
T ss_pred cEEEEEE-CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCC--cCEEEEEEcCCCEEEEEeCCCCEEEEECCCCc-----E
Confidence 3343333 455666676 678999997 777766554221 234455555667666666 7889999988763 1
Q ss_pred EEEecCCCCCCCCCCeeEEEEEE-cC-CeEEEEEcCCeEEEEeCC-CcEEEEECCccc-c--cccc------cccccCCC
Q 006913 115 QVFYGTGSGKGGTGAIAGIAVST-SS-SSVYINVKGRALFAFMTH-GQLLWSAGPVLD-Q--LGYR------QGCTKTDV 182 (626)
Q Consensus 115 ~~~~~~~~~~~~~~~~I~s~~~d-~d-G~LwIgT~~gGL~a~d~~-G~~~w~~~~~~~-~--~~~~------~~~~~~l~ 182 (626)
...+. .....+....... .+ ..|..++.++.+..+|.. +........... . +... .......
T Consensus 196 ~~~~~-----~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 269 (464)
T 3v7d_B 196 THVFE-----GHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGH- 269 (464)
T ss_dssp EEEEC-----CCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCC-
T ss_pred EEEEC-----CCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCc-
Confidence 22221 1112222222222 34 446677778888888864 432211100000 0 0000 0000000
Q ss_pred CCccccceEEEcCCCeEEEEcCCCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCC-eEEEEEcCCCEEEEEECCCCcE
Q 006913 183 DCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNG-YLYVTIPVRALVLALDTSSGNI 261 (626)
Q Consensus 183 ~~~i~sspviD~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG-~LwVGT~~gG~l~alD~~tG~~ 261 (626)
...+ .....+ ++.|..|+.++.|..+|..+++....... ....+.++....+| .+..|+ .++.+..+|..+++.
T Consensus 270 ~~~v-~~~~~~--~~~l~~~~~d~~i~vwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~sg~-~dg~i~vwd~~~~~~ 344 (464)
T 3v7d_B 270 MASV-RTVSGH--GNIVVSGSYDNTLIVWDVAQMKCLYILSG-HTDRIYSTIYDHERKRCISAS-MDTTIRIWDLENGEL 344 (464)
T ss_dssp SSCE-EEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEEETTTTEEEEEE-TTSCEEEEETTTTEE
T ss_pred cceE-EEEcCC--CCEEEEEeCCCeEEEEECCCCcEEEEecC-CCCCEEEEEEcCCCCEEEEEe-CCCcEEEEECCCCcE
Confidence 0011 112223 67788898899999999998877654331 12346667777776 455555 457888899989987
Q ss_pred EEEEecCCCCCceeeEEEeeCCeEEEEEcCCeEEEEcCC-CCEEE
Q 006913 262 LWHKSVGPLGSAEYAPVVDSNGWISVGSLDGLLYSFSPS-GVLNK 305 (626)
Q Consensus 262 ~w~~~~~~l~~~~sspvvD~dG~IWVGT~~gGLy~~d~~-g~~~~ 305 (626)
....... ...+..+..+ +..+..|+.++.|..+|.. +....
T Consensus 345 ~~~~~~h--~~~v~~~~~~-~~~l~s~s~dg~v~vwd~~~~~~~~ 386 (464)
T 3v7d_B 345 MYTLQGH--TALVGLLRLS-DKFLVSAAADGSIRGWDANDYSRKF 386 (464)
T ss_dssp EEEECCC--SSCEEEEEEC-SSEEEEEETTSEEEEEETTTCCEEE
T ss_pred EEEEeCC--CCcEEEEEEc-CCEEEEEeCCCcEEEEECCCCceee
Confidence 7665332 1234445555 6788889999999999975 44433
No 76
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.07 E-value=0.0016 Score=65.72 Aligned_cols=236 Identities=14% Similarity=0.136 Sum_probs=130.8
Q ss_pred eEEeeCCEEEEEe--CCcEEEEcC-CCCEEEEEeCCCCCCcccCeEEecCCe-EEEEE--CCeEEEEECCCCccccceeE
Q 006913 42 PLIGEDGKIYACS--EKTLFAFES-NGTIAWSLDLDFTCNIGTAPVHGGTGE-VYIVA--ENRVLKVDLLKIGTSESATQ 115 (626)
Q Consensus 42 pvid~dG~IwIgS--dggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~dG~-IwVgT--~ggL~~id~~~~~~~~~~~~ 115 (626)
+....++.+|+.. ++.|+.+|. +++..+.+..+.. .....+.++.+|+ +|++. ++.|+.+|..++.. .
T Consensus 5 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~-----~ 78 (349)
T 1jmx_B 5 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDK-FGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKN-----T 78 (349)
T ss_dssp CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSC-CSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEE-----E
T ss_pred ccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCC-CCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcE-----E
Confidence 3444678888864 578999998 7877766654321 0233566677776 77776 57899999887631 2
Q ss_pred EEecCCCCCCCCCCeeEEEEEEcCC-eEEEEEcC------------CeEEEEeCC-CcEEEEECCcccccccccccccCC
Q 006913 116 VFYGTGSGKGGTGAIAGIAVSTSSS-SVYINVKG------------RALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTD 181 (626)
Q Consensus 116 ~~~~~~~~~~~~~~~I~s~~~d~dG-~LwIgT~~------------gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l 181 (626)
............+..+..+....+| .|+++..+ +.|+.+|.. ++..... ..+. ..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~----~~~~------~~- 147 (349)
T 1jmx_B 79 FHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPV----RTFP------MP- 147 (349)
T ss_dssp EEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCS----EEEE------CC-
T ss_pred EEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCcccccee----eecc------CC-
Confidence 1111110000000011223334454 57777643 678888864 3321100 0000 00
Q ss_pred CCCccccceEEEcCCCeEEEEcCCCeEEEEeCCCCeEEEEEcCCC--CC-------------------------------
Q 006913 182 VDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSS--FD------------------------------- 228 (626)
Q Consensus 182 ~~~~i~sspviD~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s--~~------------------------------- 228 (626)
.. ...+..++ +|.+|++.. .|+.+|..+++......... ..
T Consensus 148 --~~-~~~~~~s~-dg~l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 221 (349)
T 1jmx_B 148 --RQ-VYLMRAAD-DGSLYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKD 221 (349)
T ss_dssp --SS-CCCEEECT-TSCEEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC--
T ss_pred --Cc-ccceeECC-CCcEEEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCC
Confidence 01 12344554 667888643 39999998888766543221 00
Q ss_pred ----------------------------------cceeeeeec-CC-eEEEEEcCCCEEEEEECCCCcEEEEEecCCCCC
Q 006913 229 ----------------------------------KAFTLTPGN-NG-YLYVTIPVRALVLALDTSSGNILWHKSVGPLGS 272 (626)
Q Consensus 229 ----------------------------------~v~sI~~D~-dG-~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~ 272 (626)
....+..+. || .+|++ .+.++.+|..+++.......+.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~---~~~v~~~d~~~~~~~~~~~~~~--- 295 (349)
T 1jmx_B 222 DKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV---LNRLAKYDLKQRKLIKAANLDH--- 295 (349)
T ss_dssp -----CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE---ESEEEEEETTTTEEEEEEECSS---
T ss_pred CcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE---cCeEEEEECccCeEEEEEcCCC---
Confidence 001112224 55 56666 3588889998988776554431
Q ss_pred ceeeEEEeeCC-eEEEEEcCCeEEEEcCC-CCEEEE
Q 006913 273 AEYAPVVDSNG-WISVGSLDGLLYSFSPS-GVLNKF 306 (626)
Q Consensus 273 ~~sspvvD~dG-~IWVGT~~gGLy~~d~~-g~~~~~ 306 (626)
....+..+++| .||++..++.|..+|.. ++....
T Consensus 296 ~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~ 331 (349)
T 1jmx_B 296 TYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKN 331 (349)
T ss_dssp CCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEE
T ss_pred CccceEECCCCCEEEEecCCCeEEEEeccccceeee
Confidence 12346666665 68888777889999975 554443
No 77
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.06 E-value=0.00053 Score=74.39 Aligned_cols=226 Identities=10% Similarity=0.067 Sum_probs=130.4
Q ss_pred CeEEec---CCeEEEEE-CCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEcC-----CeEE
Q 006913 82 APVHGG---TGEVYIVA-ENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKG-----RALF 152 (626)
Q Consensus 82 sp~iD~---dG~IwVgT-~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~~-----gGL~ 152 (626)
.+.+|. +|+||++. .+.|.++++.++.. ..... .......+..+.+|+||++... .+++
T Consensus 143 gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v-----~~~~~-------~~~~P~giavd~dG~lyVad~~~~~~~~gv~ 210 (433)
T 4hw6_A 143 RMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYV-----DIKTT-------NIGQCADVNFTLNGDMVVVDDQSSDTNTGIY 210 (433)
T ss_dssp EEEECTTTTTCEEEEECBTSCEEEEETTTTEE-----EEECC-------CCSCEEEEEECTTCCEEEEECCSCTTSEEEE
T ss_pred eEEEccccCCCEEEEEeCCCCEEEEECCCCEE-----EEeec-------CCCCccEEEECCCCCEEEEcCCCCcccceEE
Confidence 456775 49999986 48999999976531 11111 1112344556778889998753 3577
Q ss_pred EEeCCCcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcC-CCeEEEEeCCCCeEEEE-EcCCCCCcc
Q 006913 153 AFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNT-QGELYSLSAHSPYFNWI-QDLSSFDKA 230 (626)
Q Consensus 153 a~d~~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~-~GgL~~ld~~tg~~~w~-~~~~s~~~v 230 (626)
.++..+...... .+..+. ....+++|+.+|.||++.. ++.|++++++++.+... .........
T Consensus 211 ~~~~~~~~~~~~--~~~~~~-------------~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~ 275 (433)
T 4hw6_A 211 LFTRASGFTERL--SLCNAR-------------GAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSN 275 (433)
T ss_dssp EECGGGTTCCEE--EEEECS-------------SBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSC
T ss_pred EEECCCCeeccc--cccccC-------------CCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCc
Confidence 776543221100 000000 0123567743789999875 56799999997776222 222221222
Q ss_pred eeeeeecCCe-EEEEEcCCCEEEEEECC--CCcEE----EEEecCCCC-----------CceeeEEE---------eeCC
Q 006913 231 FTLTPGNNGY-LYVTIPVRALVLALDTS--SGNIL----WHKSVGPLG-----------SAEYAPVV---------DSNG 283 (626)
Q Consensus 231 ~sI~~D~dG~-LwVGT~~gG~l~alD~~--tG~~~----w~~~~~~l~-----------~~~sspvv---------D~dG 283 (626)
..++.+.+|+ |||+......++.++.. ++.+. ..-..+..+ .....+++ |.+|
T Consensus 276 ~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g 355 (433)
T 4hw6_A 276 FHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEY 355 (433)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCE
T ss_pred ccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCC
Confidence 3578888886 99998767788886643 44321 111101000 11334667 7889
Q ss_pred eEEEEEc-CCeEEEEcCCCCEEEEeeccC------CCC-----ccccCceEEEEEEe-cCCcEEEE
Q 006913 284 WISVGSL-DGLLYSFSPSGVLNKFSKSDT------SDS-----VIQSSPYWFHLLGP-SIGLKAIL 336 (626)
Q Consensus 284 ~IWVGT~-~gGLy~~d~~g~~~~~~~~~~------~~~-----~ilssp~V~~Il~D-sdG~IwI~ 336 (626)
+|||... ++.|.+++++|.+..+.-... .++ ..+..| ..|..| .+|+|||.
T Consensus 356 ~lyvaD~~n~~I~~~~~~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P--~giavd~~~g~lyVa 419 (433)
T 4hw6_A 356 DFYFCDRDSHTVRVLTPEGRVTTYAGRGNSREWGYVDGELRSQALFNHP--TSIAYDMKRKCFYIG 419 (433)
T ss_dssp EEEEEETTTTEEEEECTTSEEEEEECCCTTCSSCCBCEETTTTCBCSSE--EEEEEETTTTEEEEE
T ss_pred cEEEEECCCCEEEEECCCCCEEEEEeCCCCCccccCCCccccccEeCCC--cEEEEECCCCEEEEE
Confidence 9999975 468999999886655432110 011 012223 468888 89999964
No 78
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.06 E-value=0.0041 Score=62.66 Aligned_cols=222 Identities=12% Similarity=0.088 Sum_probs=128.3
Q ss_pred CCEEEEEe--CCcEEEEcC-CCCEEEEEeCCCCCCcccCeEEecCCe-EEEEE--CCeEEEEECCCCccccceeEEEecC
Q 006913 47 DGKIYACS--EKTLFAFES-NGTIAWSLDLDFTCNIGTAPVHGGTGE-VYIVA--ENRVLKVDLLKIGTSESATQVFYGT 120 (626)
Q Consensus 47 dG~IwIgS--dggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~dG~-IwVgT--~ggL~~id~~~~~~~~~~~~~~~~~ 120 (626)
.+.+|+.. ++.+..+|. +++.......+. ... .+.++.+|+ +|++. ++.|+.+|..++.. .......
T Consensus 9 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~--~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~----~~~~~~~ 81 (331)
T 3u4y_A 9 SNFGIVVEQHLRRISFFSTDTLEILNQITLGY--DFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPP----KVVAIQE 81 (331)
T ss_dssp CCEEEEEEGGGTEEEEEETTTCCEEEEEECCC--CEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSC----EEEEEEE
T ss_pred CCEEEEEecCCCeEEEEeCcccceeeeEEccC--Ccc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCce----eEEeccc
Confidence 56778765 567999998 788765555432 122 566777886 77776 57899999987642 0111111
Q ss_pred CCCCCCCCCeeEEEEEEcCCe-EEEEEcCC----eEEEEeCC-CcEEEEECCcccccccccccccCCCCCccccceEEEc
Q 006913 121 GSGKGGTGAIAGIAVSTSSSS-VYINVKGR----ALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQ 194 (626)
Q Consensus 121 ~~~~~~~~~~I~s~~~d~dG~-LwIgT~~g----GL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~ 194 (626)
. ......+....+|+ |+ ..... .|..+|.. ++.+..... + .. ...+.+++
T Consensus 82 ~------~~~~~~~~~s~dg~~l~-~~~~~~~~~~i~v~d~~~~~~~~~~~~-----~-----------~~-~~~~~~sp 137 (331)
T 3u4y_A 82 G------QSSMADVDITPDDQFAV-TVTGLNHPFNMQSYSFLKNKFISTIPI-----P-----------YD-AVGIAISP 137 (331)
T ss_dssp C------SSCCCCEEECTTSSEEE-ECCCSSSSCEEEEEETTTTEEEEEEEC-----C-----------TT-EEEEEECT
T ss_pred C------CCCccceEECCCCCEEE-EecCCCCcccEEEEECCCCCeEEEEEC-----C-----------CC-ccceEECC
Confidence 1 11122133345555 55 44333 68899975 665443200 0 00 13355665
Q ss_pred CCC-eEEEEcCC-Ce-EEEEeCCCC-eEEEE--EcCCCCCcceeeeeecCCe-EEEEEcCCCEEEEEECCCCcE---EEE
Q 006913 195 CEG-SIYISNTQ-GE-LYSLSAHSP-YFNWI--QDLSSFDKAFTLTPGNNGY-LYVTIPVRALVLALDTSSGNI---LWH 264 (626)
Q Consensus 195 ~dG-~LwIGT~~-Gg-L~~ld~~tg-~~~w~--~~~~s~~~v~sI~~D~dG~-LwVGT~~gG~l~alD~~tG~~---~w~ 264 (626)
+| .||++... +. |..++.+.. .+... ...........+..+.||+ ||++...++.+..+|..+++. ...
T Consensus 138 -dg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~ 216 (331)
T 3u4y_A 138 -NGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNA 216 (331)
T ss_dssp -TSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEE
T ss_pred -CCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeee
Confidence 55 48877553 55 665554432 22111 1111112345667778885 899886667899999888886 544
Q ss_pred EecCCCCCceeeEEEeeCCe-EEEEEc-CCeEEEEcCC-CCE
Q 006913 265 KSVGPLGSAEYAPVVDSNGW-ISVGSL-DGLLYSFSPS-GVL 303 (626)
Q Consensus 265 ~~~~~l~~~~sspvvD~dG~-IWVGT~-~gGLy~~d~~-g~~ 303 (626)
...+ .....+.++++|. +|++.. ++.|+.+|.. ++.
T Consensus 217 ~~~~---~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 217 VGTN---NLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTL 255 (331)
T ss_dssp EECS---SCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEE
T ss_pred ccCC---CCCceEEECCCCCEEEEEEcCCCEEEEEECCCCce
Confidence 4433 1234567777887 888764 4578999975 554
No 79
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.04 E-value=0.0023 Score=64.74 Aligned_cols=177 Identities=12% Similarity=0.031 Sum_probs=109.9
Q ss_pred cCeEEecCCeEEEEE--CC--eEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEcC-CeEEEEe
Q 006913 81 TAPVHGGTGEVYIVA--EN--RVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKG-RALFAFM 155 (626)
Q Consensus 81 ~sp~iD~dG~IwVgT--~g--gL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~~-gGL~a~d 155 (626)
..+..+ ++.||+++ .+ .|.++|+.+++. .-..... ....+.-+...+++||+.++. +-++.+|
T Consensus 46 qGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv-----~~~~~l~------~~~FgeGit~~g~~ly~ltw~~~~v~v~D 113 (262)
T 3nol_A 46 EGFFYR-NGYFYESTGLNGRSSIRKVDIESGKT-----LQQIELG------KRYFGEGISDWKDKIVGLTWKNGLGFVWN 113 (262)
T ss_dssp EEEEEE-TTEEEEEEEETTEEEEEEECTTTCCE-----EEEEECC------TTCCEEEEEEETTEEEEEESSSSEEEEEE
T ss_pred ceEEEE-CCEEEEECCCCCCceEEEEECCCCcE-----EEEEecC------CccceeEEEEeCCEEEEEEeeCCEEEEEE
Confidence 445565 68999998 33 799999998752 2111111 112222223357899999875 5678999
Q ss_pred CC-CcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcCCCeEEEEeCCCCeEEEEEcCCC----CCcc
Q 006913 156 TH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSS----FDKA 230 (626)
Q Consensus 156 ~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s----~~~v 230 (626)
+. ++.+-.+ .+. . .. ..+..| ++.||++...+.|+.+|+.+.++.-...... ...+
T Consensus 114 ~~t~~~~~ti-------~~~---~----eG---~glt~d--g~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~l 174 (262)
T 3nol_A 114 IRNLRQVRSF-------NYD---G----EG---WGLTHN--DQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPEL 174 (262)
T ss_dssp TTTCCEEEEE-------ECS---S----CC---CCEEEC--SSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCE
T ss_pred CccCcEEEEE-------ECC---C----Cc---eEEecC--CCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCcccccc
Confidence 85 7776554 110 0 00 123445 6889999877889999999987765433321 1111
Q ss_pred eeeeeecCCeEEEEEcCCCEEEEEECCCCcEEEEEecCCC----------CCceeeEEEeeC-CeEEEEE
Q 006913 231 FTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPL----------GSAEYAPVVDSN-GWISVGS 289 (626)
Q Consensus 231 ~sI~~D~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l----------~~~~sspvvD~d-G~IWVGT 289 (626)
..+.. .+|+||+.......+..+|+.+|++.-......+ ..+...++.|++ +++||..
T Consensus 175 NELe~-~~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 175 NELEW-VDGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp EEEEE-ETTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred ceeEE-ECCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 11222 3899999987778999999999998765544321 123456667643 5666655
No 80
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.01 E-value=0.019 Score=58.73 Aligned_cols=269 Identities=9% Similarity=-0.070 Sum_probs=149.0
Q ss_pred eeEEeeCCEEEE-Ee-CCcEEEEcC-CCCEEEEEeCCCCCCcccCeEEecCCeEEE-EE-CCeEEEEECCCCccccceeE
Q 006913 41 KPLIGEDGKIYA-CS-EKTLFAFES-NGTIAWSLDLDFTCNIGTAPVHGGTGEVYI-VA-ENRVLKVDLLKIGTSESATQ 115 (626)
Q Consensus 41 spvid~dG~IwI-gS-dggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~dG~IwV-gT-~ggL~~id~~~~~~~~~~~~ 115 (626)
......+|.+.+ |+ ++.+..+|. ++.....+.... ..+.++....+|++.+ +. ++.+..++..+...... ..
T Consensus 60 ~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~--~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~-~~ 136 (340)
T 1got_B 60 AMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRS--SWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVR-VS 136 (340)
T ss_dssp EEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSS--SCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCE-EE
T ss_pred EEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCC--ccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcce-eE
Confidence 334445665544 55 667888887 776654444322 2233445566777554 44 67788888765321000 11
Q ss_pred EEecCCCCCCCCCCeeEEEEEEcCCeEEEEEcCCeEEEEeCC-CcEEEEECCcccccccccccccCCCCCccccceEEEc
Q 006913 116 VFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQ 194 (626)
Q Consensus 116 ~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~ 194 (626)
..+. .. ...+.......++.+..++.++.+..+|.. ++....+.. +. ..+ .++...+
T Consensus 137 ~~~~-----~h-~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~------------h~---~~v-~~~~~~~ 194 (340)
T 1got_B 137 RELA-----GH-TGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTG------------HT---GDV-MSLSLAP 194 (340)
T ss_dssp EEEE-----CC-SSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECC------------CS---SCE-EEEEECT
T ss_pred EEec-----CC-CccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcC------------CC---Cce-EEEEECC
Confidence 1111 11 123444444567788888888889999975 766544310 00 111 3344443
Q ss_pred CCCeEEEEcCCCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCCeEEEEEcCCCEEEEEECCCCcEEEEEecCCCCCce
Q 006913 195 CEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAE 274 (626)
Q Consensus 195 ~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~~~ 274 (626)
.+..+..|+.++.|..+|.+++........ ....+.++....+|.+.+....++.+..+|..++..............+
T Consensus 195 ~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~-h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v 273 (340)
T 1got_B 195 DTRLFVSGACDASAKLWDVREGMCRQTFTG-HESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGI 273 (340)
T ss_dssp TSSEEEEEETTSCEEEEETTTCSEEEEECC-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCE
T ss_pred CCCEEEEEeCCCcEEEEECCCCeeEEEEcC-CcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccce
Confidence 133456677788899999988776543321 1234566666667755444335578888898888766554333211124
Q ss_pred eeEEEeeCCe-EEEEEcCCeEEEEcCC-CCEEEEeeccCCCCccccCceEEEEEEecCCcEEEEEeeecCee
Q 006913 275 YAPVVDSNGW-ISVGSLDGLLYSFSPS-GVLNKFSKSDTSDSVIQSSPYWFHLLGPSIGLKAILCLMVVGQF 344 (626)
Q Consensus 275 sspvvD~dG~-IWVGT~~gGLy~~d~~-g~~~~~~~~~~~~~~ilssp~V~~Il~DsdG~IwI~T~t~~Ggl 344 (626)
.++...++|. +..|+.++.|..+|.. ++...... . ....|.++....+|... .+++..|.+
T Consensus 274 ~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~---~-----h~~~v~~~~~s~dg~~l-~s~s~D~~i 336 (340)
T 1got_B 274 TSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLA---G-----HDNRVSCLGVTDDGMAV-ATGSWDSFL 336 (340)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE---C-----CSSCEEEEEECTTSSCE-EEEETTSCE
T ss_pred EEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEee---c-----CCCcEEEEEEcCCCCEE-EEEcCCccE
Confidence 5566666664 6667888889999864 54433222 0 12235566666666543 454444433
No 81
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.00 E-value=0.0015 Score=67.80 Aligned_cols=241 Identities=10% Similarity=0.073 Sum_probs=128.1
Q ss_pred eeeeeEEeeCCEEEEEe----CC--cEEEEcCCCCEEEEEeCC--CCC---CcccCeEEecCCeEEEEE-------CCeE
Q 006913 38 RLSKPLIGEDGKIYACS----EK--TLFAFESNGTIAWSLDLD--FTC---NIGTAPVHGGTGEVYIVA-------ENRV 99 (626)
Q Consensus 38 ~~Sspvid~dG~IwIgS----dg--gL~a~d~~G~~~W~~~~~--~~~---~i~~sp~iD~dG~IwVgT-------~ggL 99 (626)
......++.+|+||++. ++ .|..++ +|++. .++.. ..+ .....+.+|.+|+||+.. ...|
T Consensus 18 ~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~-~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 18 APGNITLTPDGRLFLSLHQFYQPEMQVAELT-QDGLI-PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp CEEEEEECTTSCEEEEECGGGCCSCSEEEEE-TTEEE-ESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CcceEEECCCCCEEEEeCCCCCCceEEEEEC-CCCee-cCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 44566777789999874 22 588887 66543 12110 001 123456788899999986 2689
Q ss_pred EEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEE-cCCeEEEEEc----CCeEEEEeCC-CcEEEEECC---cccc
Q 006913 100 LKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVST-SSSSVYINVK----GRALFAFMTH-GQLLWSAGP---VLDQ 170 (626)
Q Consensus 100 ~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d-~dG~LwIgT~----~gGL~a~d~~-G~~~w~~~~---~~~~ 170 (626)
+.+|+.+++. ...+.+.... .........+..+ .++.+|++.. .++|+.+|.. |+. |.... ....
T Consensus 96 ~~~d~~tg~~---~~~~~~~~~~--~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~-~r~~~~~~~~~~ 169 (343)
T 2qe8_A 96 VAWDTLNNQL---SRVIYLPPPI--TLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLA-ARVLQGYPGIAP 169 (343)
T ss_dssp EEEETTTTEE---EEEEECCTTT--SCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCE-EEECTTCTTTSC
T ss_pred EEEECCCCeE---EEEEECChhh--cccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCE-EEEecCCCcccc
Confidence 9999987631 0112221111 0111122334455 4689999853 5789999985 654 54310 0000
Q ss_pred --cccc-cccc---cCCCC-----CccccceEEEcCCCeEEEEcCC-CeEEEEeCCC---Ce---------EEEEEcCCC
Q 006913 171 --LGYR-QGCT---KTDVD-----CYFTSVPVIDQCEGSIYISNTQ-GELYSLSAHS---PY---------FNWIQDLSS 226 (626)
Q Consensus 171 --~~~~-~~~~---~~l~~-----~~i~sspviD~~dG~LwIGT~~-GgL~~ld~~t---g~---------~~w~~~~~s 226 (626)
..+. .+.. ....+ ......+++++.+..||++... ..|++++.+. +. +.-.-.
T Consensus 170 ~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~--- 246 (343)
T 2qe8_A 170 EDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSE--- 246 (343)
T ss_dssp CSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEE---
T ss_pred cccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEeccc---
Confidence 0000 0000 00000 0001224555413358877653 3677776421 00 000000
Q ss_pred CCcceeeeeecCCeEEEEEcCCCEEEEEECCCCcEEEEEecCCCCCceeeEEEeeCCeEEEEEc
Q 006913 227 FDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPVVDSNGWISVGSL 290 (626)
Q Consensus 227 ~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~~~sspvvD~dG~IWVGT~ 290 (626)
......++.|.+|+||++...++.+.++|+.+|++........ ......+.++.+|++||.+.
T Consensus 247 ~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~-~~~p~~va~~~~g~l~v~~~ 309 (343)
T 2qe8_A 247 KPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEK-LSWTDSFNFGSDGYLYFDCN 309 (343)
T ss_dssp CCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGG-GSCEEEEEECTTSCEEEEEC
T ss_pred CCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCc-eecCCeeEECCCCcEEEEeC
Confidence 0122357889999999998777899999975786543222111 12345677887899999874
No 82
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.99 E-value=0.0045 Score=64.08 Aligned_cols=229 Identities=13% Similarity=0.041 Sum_probs=128.3
Q ss_pred cCeEEecCCeEEEEE---C-C--eEEEEECCCCccccceeEEEecCCC-CCCCCCCeeEEEEEEcCCeEEEEEc------
Q 006913 81 TAPVHGGTGEVYIVA---E-N--RVLKVDLLKIGTSESATQVFYGTGS-GKGGTGAIAGIAVSTSSSSVYINVK------ 147 (626)
Q Consensus 81 ~sp~iD~dG~IwVgT---~-g--gL~~id~~~~~~~~~~~~~~~~~~~-~~~~~~~~I~s~~~d~dG~LwIgT~------ 147 (626)
..+.++.+|++|++. . + .|..++ ++. ...+.... .....-..+..+..+.+|+||+...
T Consensus 20 ~~va~~~~g~~~v~~~~~~~~~~~l~~~~--~g~------~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~ 91 (343)
T 2qe8_A 20 GNITLTPDGRLFLSLHQFYQPEMQVAELT--QDG------LIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKS 91 (343)
T ss_dssp EEEEECTTSCEEEEECGGGCCSCSEEEEE--TTE------EEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTS
T ss_pred ceEEECCCCCEEEEeCCCCCCceEEEEEC--CCC------eecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCC
Confidence 356677889999885 2 2 588887 331 11221100 0000112344556678899999864
Q ss_pred CCeEEEEeCC-CcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcC----CCeEEEEeCCCCeEEEEE
Q 006913 148 GRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNT----QGELYSLSAHSPYFNWIQ 222 (626)
Q Consensus 148 ~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~----~GgL~~ld~~tg~~~w~~ 222 (626)
...|+.+|+. |+++-.+. ++... .... .....+++|..++.+|++.. .++|+.+|.++++..-..
T Consensus 92 ~~~i~~~d~~tg~~~~~~~-----~~~~~----~~~~-~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~ 161 (343)
T 2qe8_A 92 VPKLVAWDTLNNQLSRVIY-----LPPPI----TLSN-SFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVL 161 (343)
T ss_dssp CCEEEEEETTTTEEEEEEE-----CCTTT----SCTT-CCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEEC
T ss_pred CCeEEEEECCCCeEEEEEE-----CChhh----cccc-cccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEe
Confidence 3689999975 77544331 11000 0000 11134677742679999864 578999999887653222
Q ss_pred cC-CC--------------C-------------CcceeeeeecCC-eEEEEEcCCCEEEEEECC---CCcE---------
Q 006913 223 DL-SS--------------F-------------DKAFTLTPGNNG-YLYVTIPVRALVLALDTS---SGNI--------- 261 (626)
Q Consensus 223 ~~-~s--------------~-------------~~v~sI~~D~dG-~LwVGT~~gG~l~alD~~---tG~~--------- 261 (626)
.. .. . ..+..++.+.|| .||++...+..++.++.. .+..
T Consensus 162 ~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 241 (343)
T 2qe8_A 162 QGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKI 241 (343)
T ss_dssp TTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTC
T ss_pred cCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcce
Confidence 11 00 0 012346666677 588877655677777631 1110
Q ss_pred EEEEecCCCCCceeeEEEeeCCeEEEEEc-CCeEEEEcC-CCCEEEEeeccCCCCccccCceEEEEEEecCCcEEEEEe
Q 006913 262 LWHKSVGPLGSAEYAPVVDSNGWISVGSL-DGLLYSFSP-SGVLNKFSKSDTSDSVIQSSPYWFHLLGPSIGLKAILCL 338 (626)
Q Consensus 262 ~w~~~~~~l~~~~sspvvD~dG~IWVGT~-~gGLy~~d~-~g~~~~~~~~~~~~~~ilssp~V~~Il~DsdG~IwI~T~ 338 (626)
.-.-..+ ....+++|++|+||++.. ++.|.++++ +|+....... . .......+..+.+|.+|+.+.
T Consensus 242 ~~~g~~g----~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~----~---~~~~p~~va~~~~g~l~v~~~ 309 (343)
T 2qe8_A 242 ERYSEKP----ICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTD----E---KLSWTDSFNFGSDGYLYFDCN 309 (343)
T ss_dssp EEEEECC----SCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEEC----G---GGSCEEEEEECTTSCEEEEEC
T ss_pred EecccCC----CCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEEC----C---ceecCCeeEECCCCcEEEEeC
Confidence 0000011 123478898999999985 468999999 7865433321 0 012234677788899997654
No 83
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.98 E-value=0.0032 Score=66.29 Aligned_cols=228 Identities=15% Similarity=0.094 Sum_probs=123.3
Q ss_pred eeeeeEEeeCCEEEEEe-CCcEEEEcCCCCEEEEEeCC--C-CCCcccCeEEecC----CeEEEEE-C--------CeEE
Q 006913 38 RLSKPLIGEDGKIYACS-EKTLFAFESNGTIAWSLDLD--F-TCNIGTAPVHGGT----GEVYIVA-E--------NRVL 100 (626)
Q Consensus 38 ~~Sspvid~dG~IwIgS-dggL~a~d~~G~~~W~~~~~--~-~~~i~~sp~iD~d----G~IwVgT-~--------ggL~ 100 (626)
.-..++++.+|+||++. .+.|++++.+|. .-..... . ...-...+.++.+ |.||+.. . +.|.
T Consensus 30 ~P~~ia~~pdG~l~V~e~~g~I~~~d~~G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~ 108 (354)
T 3a9g_A 30 VPWSIAPLGGGRYLVTERPGRLVLISPSGK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVI 108 (354)
T ss_dssp CEEEEEEEETTEEEEEETTTEEEEECSSCE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEE
T ss_pred CCeEEEEcCCCeEEEEeCCCEEEEEeCCCc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEE
Confidence 34566777899999997 678999987775 2111111 0 0011234566654 8999975 3 6799
Q ss_pred EEECCCC--ccccceeEEE-ecCCCCCCCCCCeeEEEEEEcCCeEEEEEc--------------CCeEEEEeCCCc----
Q 006913 101 KVDLLKI--GTSESATQVF-YGTGSGKGGTGAIAGIAVSTSSSSVYINVK--------------GRALFAFMTHGQ---- 159 (626)
Q Consensus 101 ~id~~~~--~~~~~~~~~~-~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~--------------~gGL~a~d~~G~---- 159 (626)
+++..+. ........+. +... ..+. .+.+..+.+|.||+++. .+.|++++++|+
T Consensus 109 r~~~~~~~~~~~~~~~l~~~~~~~--~~h~---~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~ 183 (354)
T 3a9g_A 109 RGRLDGSTFKLKEVKTLIDGIPGA--YIHN---GGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPAD 183 (354)
T ss_dssp EEEECSSSCCEEEEEEEEEEEECC--SSCC---CCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTT
T ss_pred EEEECCCCcCcCccEEEEEcCCCC--CCcC---CceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCC
Confidence 9987653 1110111111 1111 1111 12345578999999853 246888988775
Q ss_pred ------EEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcCCC----eEEEEeCCCCeEEEEE-------
Q 006913 160 ------LLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQG----ELYSLSAHSPYFNWIQ------- 222 (626)
Q Consensus 160 ------~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~~G----gL~~ld~~tg~~~w~~------- 222 (626)
.+|.. +.+. ..-+.+|+.+|.||++.... .|..+.+ ++.+-|-.
T Consensus 184 npf~~~~i~a~-------G~rn-----------p~Gla~d~~~g~l~v~d~g~~~~dei~~i~~-G~nyGwp~~~g~~~~ 244 (354)
T 3a9g_A 184 NPFPNSPIWSY-------GHRN-----------PQGIDWHRASGVMVATEHGPVGHDEVNIILK-GGNYGWPLATGKAGR 244 (354)
T ss_dssp SSSTTCCEEEE-------CCSC-----------CCEEEECTTTCCEEEEECCSSSCCEEEEECT-TCBCCTTTCCSCCCC
T ss_pred CCCCCCcEEEE-------ccCC-----------cceEEEeCCCCCEEEEecCCCCCcEEEEecC-CCcCCCCcccCCCCC
Confidence 23432 1110 12256664368899987532 3666643 22222210
Q ss_pred --------cC-CCCCcceeeee-------ecCCeEEEEEcCCCEEEEEECCC-CcEEE-EEecCCCCCceeeEEEeeCCe
Q 006913 223 --------DL-SSFDKAFTLTP-------GNNGYLYVTIPVRALVLALDTSS-GNILW-HKSVGPLGSAEYAPVVDSNGW 284 (626)
Q Consensus 223 --------~~-~s~~~v~sI~~-------D~dG~LwVGT~~gG~l~alD~~t-G~~~w-~~~~~~l~~~~sspvvD~dG~ 284 (626)
.. ........++. +.+|.+|++...++.+..++... |...- ..-..........+.++++|.
T Consensus 245 ~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~ 324 (354)
T 3a9g_A 245 GEFVDPVIDTGSETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGG 324 (354)
T ss_dssp TTSCCCSEECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSC
T ss_pred CCCcCCEeecCCCCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCc
Confidence 00 00001122232 46899999998778888888654 33321 111111112245678888999
Q ss_pred EEEEEc
Q 006913 285 ISVGSL 290 (626)
Q Consensus 285 IWVGT~ 290 (626)
|||.+.
T Consensus 325 lyv~~~ 330 (354)
T 3a9g_A 325 ILISTS 330 (354)
T ss_dssp EEEEEC
T ss_pred EEEEEe
Confidence 999986
No 84
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.98 E-value=0.0083 Score=61.69 Aligned_cols=197 Identities=10% Similarity=0.083 Sum_probs=117.1
Q ss_pred ceeeeeEEee-CCEEEEEe--CCcEEEEcCCC----CE-EEEEeCCCCCCcccCeEEec-CCeEEEEE--CCeEEEEECC
Q 006913 37 FRLSKPLIGE-DGKIYACS--EKTLFAFESNG----TI-AWSLDLDFTCNIGTAPVHGG-TGEVYIVA--ENRVLKVDLL 105 (626)
Q Consensus 37 ~~~Sspvid~-dG~IwIgS--dggL~a~d~~G----~~-~W~~~~~~~~~i~~sp~iD~-dG~IwVgT--~ggL~~id~~ 105 (626)
.....+..|. ++.||+.. .+.|++++.+| .. ........ .....+.+|. .++||+.. .+.|.+++++
T Consensus 30 ~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~--~~p~glavd~~~~~ly~~d~~~~~I~~~~~~ 107 (316)
T 1ijq_A 30 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI--QAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 107 (316)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSC--SCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCC--CCcCEEEEeecCCeEEEEECCCCEEEEEeCC
Confidence 3345667764 67898876 46799998854 22 11121111 1234567774 78899985 5789999987
Q ss_pred CCccccceeEEEecCCCCCCCCCCeeEEEEEE-cCCeEEEEEcC--CeEEEEeCCCcEEEEECCcccccccccccccCCC
Q 006913 106 KIGTSESATQVFYGTGSGKGGTGAIAGIAVST-SSSSVYINVKG--RALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDV 182 (626)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d-~dG~LwIgT~~--gGL~a~d~~G~~~w~~~~~~~~~~~~~~~~~~l~ 182 (626)
+.. ........ .... ..+..+ .+|.||+...+ +.|+.++++|...-.... ..+
T Consensus 108 g~~-----~~~~~~~~-----~~~P-~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~------------~~~- 163 (316)
T 1ijq_A 108 GVK-----RKTLFREN-----GSKP-RAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT------------ENI- 163 (316)
T ss_dssp SSS-----EEEEEECT-----TCCE-EEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEEC------------SSC-
T ss_pred CCc-----eEEEEECC-----CCCc-ceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEE------------CCC-
Confidence 642 12221110 0112 334456 58899998754 579999988765332200 000
Q ss_pred CCccccceEEEcCCCeEEEEcC-CCeEEEEeCCCCeEEEEEcC-CCCCcceeeeeecCCeEEEEEcCCCEEEEEECCCCc
Q 006913 183 DCYFTSVPVIDQCEGSIYISNT-QGELYSLSAHSPYFNWIQDL-SSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGN 260 (626)
Q Consensus 183 ~~~i~sspviD~~dG~LwIGT~-~GgL~~ld~~tg~~~w~~~~-~s~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~tG~ 260 (626)
.....+++|..++.||++.. .+.|.++|.++......... ........++++ +++||+....++.+..+++.+|+
T Consensus 164 --~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g~ 240 (316)
T 1ijq_A 164 --QWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGS 240 (316)
T ss_dssp --SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCC
T ss_pred --CCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCCc
Confidence 01234677743789998865 56899999987544333222 122344567776 58999988777899999977776
Q ss_pred EE
Q 006913 261 IL 262 (626)
Q Consensus 261 ~~ 262 (626)
..
T Consensus 241 ~~ 242 (316)
T 1ijq_A 241 DV 242 (316)
T ss_dssp CC
T ss_pred ce
Confidence 43
No 85
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.94 E-value=0.0076 Score=60.32 Aligned_cols=178 Identities=14% Similarity=0.068 Sum_probs=110.1
Q ss_pred ccCeEEecCCeEEEEE-C---CeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEcC-CeEEEE
Q 006913 80 GTAPVHGGTGEVYIVA-E---NRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKG-RALFAF 154 (626)
Q Consensus 80 ~~sp~iD~dG~IwVgT-~---ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~~-gGL~a~ 154 (626)
...+..+. +.||+++ . ..|.++|+.+++. .-..... ....+.-+...+++||+.+.. +-++.+
T Consensus 23 tqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv-----~~~~~l~------~~~fgeGi~~~~~~ly~ltw~~~~v~v~ 90 (243)
T 3mbr_X 23 TEGLFYLR-GHLYESTGETGRSSVRKVDLETGRI-----LQRAEVP------PPYFGAGIVAWRDRLIQLTWRNHEGFVY 90 (243)
T ss_dssp EEEEEEET-TEEEEEECCTTSCEEEEEETTTCCE-----EEEEECC------TTCCEEEEEEETTEEEEEESSSSEEEEE
T ss_pred cccEEEEC-CEEEEECCCCCCceEEEEECCCCCE-----EEEEeCC------CCcceeEEEEeCCEEEEEEeeCCEEEEE
Confidence 33455554 8999998 2 3799999998752 1111111 112222223347899999865 557889
Q ss_pred eCC-CcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcCCCeEEEEeCCCCeEEEEEcCCC----CCc
Q 006913 155 MTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSS----FDK 229 (626)
Q Consensus 155 d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s----~~~ 229 (626)
|++ .+.+-.+ ++. . .. ..+..| ++.||++...+.|+.+|+++.++.-...... ...
T Consensus 91 D~~tl~~~~ti-------~~~----~---~G---wglt~d--g~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~ 151 (243)
T 3mbr_X 91 DLATLTPRARF-------RYP----G---EG---WALTSD--DSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDN 151 (243)
T ss_dssp ETTTTEEEEEE-------ECS----S---CC---CEEEEC--SSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCC
T ss_pred ECCcCcEEEEE-------eCC----C---Cc---eEEeeC--CCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCccccc
Confidence 975 7766544 110 0 00 123344 7889999988899999999987765433221 111
Q ss_pred ceeeeeecCCeEEEEEcCCCEEEEEECCCCcEEEEEecCC-----------CCCceeeEEEeeC-CeEEEEE
Q 006913 230 AFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGP-----------LGSAEYAPVVDSN-GWISVGS 289 (626)
Q Consensus 230 v~sI~~D~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~-----------l~~~~sspvvD~d-G~IWVGT 289 (626)
+..+ +-.+|+||+.......+..+|+.+|++.-.....+ ...+...++.|++ +++||..
T Consensus 152 lNeL-e~~~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 152 LNEL-EWVNGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp EEEE-EEETTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred ceee-EEeCCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 2122 22489999998766799999999999876554331 1124566777753 5677755
No 86
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.92 E-value=0.007 Score=61.40 Aligned_cols=188 Identities=13% Similarity=0.028 Sum_probs=116.9
Q ss_pred cCeEEecCCeEEEEE----CCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEcC-CeEEEEe
Q 006913 81 TAPVHGGTGEVYIVA----ENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKG-RALFAFM 155 (626)
Q Consensus 81 ~sp~iD~dG~IwVgT----~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~~-gGL~a~d 155 (626)
..+.++.+|.||+++ ++.|..+|+.+++. .-...... . .....+...++.||+.++. +.++.+|
T Consensus 24 ~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v-----~~~i~l~~-----~-~fgeGi~~~g~~lyv~t~~~~~v~viD 92 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLYGRSSVRQVALQTGKV-----ENIHKMDD-----S-YFGEGLTLLNEKLYQVVWLKNIGFIYD 92 (266)
T ss_dssp EEEEECSTTEEEEEECSTTTCEEEEEETTTCCE-----EEEEECCT-----T-CCEEEEEEETTEEEEEETTCSEEEEEE
T ss_pred ccEEEeCCCeEEEECCCCCCCEEEEEECCCCCE-----EEEEecCC-----C-cceEEEEEeCCEEEEEEecCCEEEEEE
Confidence 356667779999997 26899999998752 21211110 1 1111122236799999875 5678999
Q ss_pred CC-CcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcCCCeEEEEeCCCCeEEEEEcCCC----CCcc
Q 006913 156 TH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSS----FDKA 230 (626)
Q Consensus 156 ~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s----~~~v 230 (626)
+. ++.+-.+.. + .. .. ..+..| ++.+|++...+.|+.+|+++.++.-....+. ....
T Consensus 93 ~~t~~v~~~i~~-----g------~~--~g---~glt~D--g~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~ 154 (266)
T 2iwa_A 93 RRTLSNIKNFTH-----Q------MK--DG---WGLATD--GKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRL 154 (266)
T ss_dssp TTTTEEEEEEEC-----C------SS--SC---CEEEEC--SSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCE
T ss_pred CCCCcEEEEEEC-----C------CC--Ce---EEEEEC--CCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccc
Confidence 75 776655410 0 00 00 113334 6889999888899999999987765544321 1112
Q ss_pred eeeeeecCCeEEEEEcCCCEEEEEECCCCcEEEEEecCC-----------CCCceeeEEEeeC-CeEEEEEc-CCeEEEE
Q 006913 231 FTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGP-----------LGSAEYAPVVDSN-GWISVGSL-DGLLYSF 297 (626)
Q Consensus 231 ~sI~~D~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~-----------l~~~~sspvvD~d-G~IWVGT~-~gGLy~~ 297 (626)
..+... +|.||+.....+.+..+|+.+|++.-....+. .......++.+++ +++||+.. .+.|+.+
T Consensus 155 nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i 233 (266)
T 2iwa_A 155 NELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEI 233 (266)
T ss_dssp EEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEE
T ss_pred eeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEE
Confidence 233333 78999998766799999999999875554321 0123456777765 47888773 4567766
Q ss_pred c
Q 006913 298 S 298 (626)
Q Consensus 298 d 298 (626)
+
T Consensus 234 ~ 234 (266)
T 2iwa_A 234 K 234 (266)
T ss_dssp E
T ss_pred E
Confidence 5
No 87
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.91 E-value=0.036 Score=58.59 Aligned_cols=255 Identities=11% Similarity=-0.039 Sum_probs=150.4
Q ss_pred CCEEEEEe-CCcEEEEcC-CCCEEEEEeCCCCCCcccCeEEecCCeEEEEE-CCeEEEEECCCCccccceeEEEecCCCC
Q 006913 47 DGKIYACS-EKTLFAFES-NGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVA-ENRVLKVDLLKIGTSESATQVFYGTGSG 123 (626)
Q Consensus 47 dG~IwIgS-dggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~dG~IwVgT-~ggL~~id~~~~~~~~~~~~~~~~~~~~ 123 (626)
++.++.|+ ++.+..+|. +++....+.... ..+.++..+ .+.+..++ ++.|..+|..++.. ...+..
T Consensus 169 ~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~--~~v~~~~~~-~~~l~s~s~dg~i~~wd~~~~~~-----~~~~~~--- 237 (445)
T 2ovr_B 169 DNIIISGSTDRTLKVWNAETGECIHTLYGHT--STVRCMHLH-EKRVVSGSRDATLRVWDIETGQC-----LHVLMG--- 237 (445)
T ss_dssp TTEEEEEETTSCEEEEETTTTEEEEEECCCS--SCEEEEEEE-TTEEEEEETTSEEEEEESSSCCE-----EEEEEC---
T ss_pred CCEEEEEeCCCeEEEEECCcCcEEEEECCCC--CcEEEEEec-CCEEEEEeCCCEEEEEECCCCcE-----EEEEcC---
Confidence 45666666 667888887 676655443221 223344443 34566666 78899999877531 222211
Q ss_pred CCCCCCeeEEEEEEcCCeEEEEEcCCeEEEEeCC-CcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEE
Q 006913 124 KGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYIS 202 (626)
Q Consensus 124 ~~~~~~~I~s~~~d~dG~LwIgT~~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIG 202 (626)
. ...+..+.. .+..+..++.++.|..+|.. ++.+..... + ...+ .++..+ +..|+.|
T Consensus 238 --~-~~~v~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~------------~---~~~v-~~~~~~--~~~l~~~ 295 (445)
T 2ovr_B 238 --H-VAAVRCVQY-DGRRVVSGAYDFMVKVWDPETETCLHTLQG------------H---TNRV-YSLQFD--GIHVVSG 295 (445)
T ss_dssp --C-SSCEEEEEE-CSSCEEEEETTSCEEEEEGGGTEEEEEECC------------C---SSCE-EEEEEC--SSEEEEE
T ss_pred --C-cccEEEEEE-CCCEEEEEcCCCEEEEEECCCCcEeEEecC------------C---CCce-EEEEEC--CCEEEEE
Confidence 1 122333332 55668888888889999975 766655411 0 0111 233444 6788899
Q ss_pred cCCCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCCeEEEEEcCCCEEEEEECCCCcEEEEEecCC-CCCceeeEEEee
Q 006913 203 NTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGP-LGSAEYAPVVDS 281 (626)
Q Consensus 203 T~~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~-l~~~~sspvvD~ 281 (626)
+.++.|..+|.++++........ ...+.++..+ ++.+.+|+. ++.+..+|..+++......... ....+.++..+
T Consensus 296 ~~d~~i~i~d~~~~~~~~~~~~~-~~~v~~~~~~-~~~l~~~~~-dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~- 371 (445)
T 2ovr_B 296 SLDTSIRVWDVETGNCIHTLTGH-QSLTSGMELK-DNILVSGNA-DSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN- 371 (445)
T ss_dssp ETTSCEEEEETTTCCEEEEECCC-CSCEEEEEEE-TTEEEEEET-TSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC-
T ss_pred eCCCeEEEEECCCCCEEEEEcCC-cccEEEEEEe-CCEEEEEeC-CCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC-
Confidence 88999999999998876654321 1234445444 456777764 5788889988998876654321 11234445555
Q ss_pred CCeEEEEEcCCeEEEEcCC-CCEEEEeeccCCCCccccCceEEEEEEecCCcEEEEEeeecC
Q 006913 282 NGWISVGSLDGLLYSFSPS-GVLNKFSKSDTSDSVIQSSPYWFHLLGPSIGLKAILCLMVVG 342 (626)
Q Consensus 282 dG~IWVGT~~gGLy~~d~~-g~~~~~~~~~~~~~~ilssp~V~~Il~DsdG~IwI~T~t~~G 342 (626)
...|..|+.++.|..+|.. ++........... .....|.++....+|.+. .+++..|
T Consensus 372 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~---~~~~~v~~~~~s~~~~~l-a~~~~dg 429 (445)
T 2ovr_B 372 KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESG---GSGGVVWRIRASNTKLVC-AVGSRNG 429 (445)
T ss_dssp SSEEEEEETTSEEEEEETTTCCEEEEEEECTTG---GGTCEEEEEEECSSEEEE-EEECSSS
T ss_pred CCEEEEEeCCCeEEEEECCCCceeeeeeccccC---CCCceEEEEEecCCEEEE-EEcccCC
Confidence 5788889999999999964 6655433211111 233456667666666653 5544433
No 88
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.90 E-value=0.025 Score=56.29 Aligned_cols=233 Identities=12% Similarity=0.028 Sum_probs=130.2
Q ss_pred cccCeEEecCCeEEEEE-CCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEcCC-eEEEEEcCCeEEEEeC
Q 006913 79 IGTAPVHGGTGEVYIVA-ENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSS-SVYINVKGRALFAFMT 156 (626)
Q Consensus 79 i~~sp~iD~dG~IwVgT-~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG-~LwIgT~~gGL~a~d~ 156 (626)
.+.++....++++.+.. ++.|..++..++........... ......+..+....++ .|..++.++.|..+|.
T Consensus 53 ~v~~~~~~~~~~~l~~~~dg~i~iw~~~~~~~~~~~~~~~~------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~ 126 (337)
T 1gxr_A 53 VVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDC------LNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDL 126 (337)
T ss_dssp CCCEEEECSSSSEEEEECBSEEEEEETTSTTCCSCSEEEEC------SCTTSBEEEEEECTTSSEEEEEESSSEEEEEEC
T ss_pred ceEEEEEecCCcEEEEcCCCeEEEEECCCCCceeeeecccc------cCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEEC
Confidence 34456666777766554 78888888876421111011110 0112234444444454 5777777788889997
Q ss_pred C-CcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcCCCeEEEEeCCCCeEEEEEcCCCCCcceeeee
Q 006913 157 H-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTP 235 (626)
Q Consensus 157 ~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~ 235 (626)
. ++..... .+. . + ... ...+...+.+..|+.++.++.|..+|.++++....... ....+.++..
T Consensus 127 ~~~~~~~~~-----~~~--~---~---~~~-i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~-~~~~i~~~~~ 191 (337)
T 1gxr_A 127 AAPTPRIKA-----ELT--S---S---APA-CYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG-HTDGASCIDI 191 (337)
T ss_dssp CCC--EEEE-----EEE--C---S---SSC-EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEE
T ss_pred CCCCcceee-----ecc--c---C---CCc-eEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeec-ccCceEEEEE
Confidence 5 5421111 000 0 0 011 12334443245678888889999999998876554332 1234556666
Q ss_pred ecCC-eEEEEEcCCCEEEEEECCCCcEEEEEecCCCCCceeeEEEeeCC-eEEEEEcCCeEEEEcCC-CCEEEEeeccCC
Q 006913 236 GNNG-YLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPVVDSNG-WISVGSLDGLLYSFSPS-GVLNKFSKSDTS 312 (626)
Q Consensus 236 D~dG-~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~~~sspvvD~dG-~IWVGT~~gGLy~~d~~-g~~~~~~~~~~~ 312 (626)
..+| .|++++ ..+.+..+|..+++........ ..+..+...++| .+.+|+.++.|+.++.. ++......
T Consensus 192 ~~~~~~l~~~~-~dg~i~~~d~~~~~~~~~~~~~---~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~---- 263 (337)
T 1gxr_A 192 SNDGTKLWTGG-LDNTVRSWDLREGRQLQQHDFT---SQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHL---- 263 (337)
T ss_dssp CTTSSEEEEEE-TTSEEEEEETTTTEEEEEEECS---SCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECC----
T ss_pred CCCCCEEEEEe-cCCcEEEEECCCCceEeeecCC---CceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEEcC----
Confidence 6666 555555 4678999999888877665443 124456665555 57778888999999975 44332211
Q ss_pred CCccccCceEEEEEEecCCcEEEEEeeecCeeEE
Q 006913 313 DSVIQSSPYWFHLLGPSIGLKAILCLMVVGQFSS 346 (626)
Q Consensus 313 ~~~ilssp~V~~Il~DsdG~IwI~T~t~~Ggl~~ 346 (626)
....|..+....+|.+. .++...|.+..
T Consensus 264 -----~~~~v~~~~~~~~~~~l-~~~~~dg~i~~ 291 (337)
T 1gxr_A 264 -----HESCVLSLKFAYCGKWF-VSTGKDNLLNA 291 (337)
T ss_dssp -----CSSCEEEEEECTTSSEE-EEEETTSEEEE
T ss_pred -----CccceeEEEECCCCCEE-EEecCCCcEEE
Confidence 11234555556666654 44444454443
No 89
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.89 E-value=0.0077 Score=61.38 Aligned_cols=248 Identities=13% Similarity=0.110 Sum_probs=125.4
Q ss_pred eeeeEEeeCCEEEEEeC----CcEEEEcC-CCCEEEEEeCCCCCCcccCeEEecCCe-EEEEE--CCeEEEEECCC-Ccc
Q 006913 39 LSKPLIGEDGKIYACSE----KTLFAFES-NGTIAWSLDLDFTCNIGTAPVHGGTGE-VYIVA--ENRVLKVDLLK-IGT 109 (626)
Q Consensus 39 ~Sspvid~dG~IwIgSd----ggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~dG~-IwVgT--~ggL~~id~~~-~~~ 109 (626)
...+.++.+|+||+++. +.++.++. +|.................+.++.+|+ ||++. ++.+..++... +..
T Consensus 42 p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~ 121 (347)
T 3hfq_A 42 PTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGAL 121 (347)
T ss_dssp CCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCE
T ss_pred cceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCe
Confidence 34456667888888763 47888887 555321111000011233566778887 77766 46677777642 211
Q ss_pred ccceeEEEecC-CCCC--CCCCCeeEEEEEEcCCeEEEEEcC-CeEEEEeC--CCcEEEEECCcccccccccccccCCCC
Q 006913 110 SESATQVFYGT-GSGK--GGTGAIAGIAVSTSSSSVYINVKG-RALFAFMT--HGQLLWSAGPVLDQLGYRQGCTKTDVD 183 (626)
Q Consensus 110 ~~~~~~~~~~~-~~~~--~~~~~~I~s~~~d~dG~LwIgT~~-gGL~a~d~--~G~~~w~~~~~~~~~~~~~~~~~~l~~ 183 (626)
........ .... ......+..+....+|++|+.... +.+..++. +|++.... .+.... +
T Consensus 122 ---~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~-----~~~~~~-------g 186 (347)
T 3hfq_A 122 ---TLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQS-----VLTMEA-------G 186 (347)
T ss_dssp ---EEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEE-----EEECCT-------T
T ss_pred ---eecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEee-----eEEcCC-------C
Confidence 00111111 0000 001123444556778888887654 45777775 35543221 000000 0
Q ss_pred CccccceEEEcCCCe-EEEEcC-CCeEEEEeCC--CCeEEEEEcC---CC----CCcceeeeeecCCe-EEEEEcCCCEE
Q 006913 184 CYFTSVPVIDQCEGS-IYISNT-QGELYSLSAH--SPYFNWIQDL---SS----FDKAFTLTPGNNGY-LYVTIPVRALV 251 (626)
Q Consensus 184 ~~i~sspviD~~dG~-LwIGT~-~GgL~~ld~~--tg~~~w~~~~---~s----~~~v~sI~~D~dG~-LwVGT~~gG~l 251 (626)
.. ...+.+++ +|+ ||+... ++.+..++.+ ++++...... .. ...+..++.+.||+ ||++....+.+
T Consensus 187 ~~-p~~~~~sp-dg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v 264 (347)
T 3hfq_A 187 FG-PRHLVFSP-DGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTL 264 (347)
T ss_dssp CC-EEEEEECT-TSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEE
T ss_pred CC-CceEEECC-CCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEE
Confidence 00 12245665 665 888643 5555555544 5665432221 11 12345577788885 88876555667
Q ss_pred EEEECC-CCcEEE--EEecCCCCCceeeEEEeeCCe-EEEEEcC-CeEEEE--cCC-CCEEE
Q 006913 252 LALDTS-SGNILW--HKSVGPLGSAEYAPVVDSNGW-ISVGSLD-GLLYSF--SPS-GVLNK 305 (626)
Q Consensus 252 ~alD~~-tG~~~w--~~~~~~l~~~~sspvvD~dG~-IWVGT~~-gGLy~~--d~~-g~~~~ 305 (626)
..++.. +|.... ..... +.....+.++++|. ||++..+ +.+..| |+. |+...
T Consensus 265 ~v~~~~~~g~~~~~~~~~~~--~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~ 324 (347)
T 3hfq_A 265 AVFAVTADGHLTLIQQISTE--GDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLSL 324 (347)
T ss_dssp EEEEECGGGCEEEEEEEECS--SSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEE
T ss_pred EEEEECCCCcEEEeEEEecC--CCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEe
Confidence 667653 343332 22221 12234567777875 8888765 555555 654 65543
No 90
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.86 E-value=0.014 Score=61.02 Aligned_cols=227 Identities=14% Similarity=0.043 Sum_probs=132.3
Q ss_pred eeCCEEEEEeCCcEEEEcCCCCEEEEEeCCCCCCcccCeEEe-cCCeEEEEE--CCeEEEEECCCCccccceeEEEecCC
Q 006913 45 GEDGKIYACSEKTLFAFESNGTIAWSLDLDFTCNIGTAPVHG-GTGEVYIVA--ENRVLKVDLLKIGTSESATQVFYGTG 121 (626)
Q Consensus 45 d~dG~IwIgSdggL~a~d~~G~~~W~~~~~~~~~i~~sp~iD-~dG~IwVgT--~ggL~~id~~~~~~~~~~~~~~~~~~ 121 (626)
+.++.|+++....|..++.+|... ....... .....+..| .++.||+.. .+.|+++++++... .......
T Consensus 42 ~~~~~ll~~~~~~I~~i~~~g~~~-~~~~~~~-~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~-----~~~~~~~ 114 (349)
T 3v64_C 42 GPEPVLLFANRIDIRQVLPHRSEY-TLLLNNL-ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNV-----EEVVSTG 114 (349)
T ss_dssp SSCCEEEEECBSCEEEECTTSCCE-EEEECSC-SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-----EEEECSS
T ss_pred ccCceeEeecccceEEEeCCCCee-EEeecCC-CceEEEEEeccccEEEEEeccCCceEEEecCCCCc-----eEEEeCC
Confidence 346677777777799999865422 1111111 122345566 578899886 67899999887531 1111110
Q ss_pred CCCCCCCCeeEEEEEE-cCCeEEEEEcC-CeEEEEeCCCcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeE
Q 006913 122 SGKGGTGAIAGIAVST-SSSSVYINVKG-RALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSI 199 (626)
Q Consensus 122 ~~~~~~~~~I~s~~~d-~dG~LwIgT~~-gGL~a~d~~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~L 199 (626)
.....+ +..+ .+++||+.... +.|..++.+|...-... . ..+ .....+++|+.++.|
T Consensus 115 -----~~~p~g-lavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~--------~----~~l---~~P~~iavdp~~g~l 173 (349)
T 3v64_C 115 -----LESPGG-LAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL--------W----QSL---EKPRAIALHPMEGTI 173 (349)
T ss_dssp -----CSCCCE-EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE--------C----TTC---SCEEEEEEETTTTEE
T ss_pred -----CCCccE-EEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEE--------e----CCC---CCcceEEEecCcCeE
Confidence 011223 3345 58899988653 67888998765322210 0 000 012346788547889
Q ss_pred EEEcCC--CeEEEEeCCCCeEEEEEcCCCCCcceeeeee-cCCeEEEEEcCCCEEEEEECCCCcEEEEEecCCCCCceee
Q 006913 200 YISNTQ--GELYSLSAHSPYFNWIQDLSSFDKAFTLTPG-NNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYA 276 (626)
Q Consensus 200 wIGT~~--GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D-~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~~~ss 276 (626)
|+.... +.|++++.++........ ........++.| .+++||++....+.+..+|............+ + .....
T Consensus 174 y~td~~~~~~I~r~~~dG~~~~~~~~-~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~-~-~~P~g 250 (349)
T 3v64_C 174 YWTDWGNTPRIEASSMDGSGRRIIAD-THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQG-L-PHPFA 250 (349)
T ss_dssp EEEECSSSCEEEEEETTSCSCEESCC-SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSS-C-SSEEE
T ss_pred EEeccCCCCEEEEEeCCCCCcEEEEE-CCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCC-C-CCceE
Confidence 988763 679999988754332211 122334568888 57899999877778999986433222212111 1 12344
Q ss_pred EEEeeCCeEEEEEc-CCeEEEEcC-CCCE
Q 006913 277 PVVDSNGWISVGSL-DGLLYSFSP-SGVL 303 (626)
Q Consensus 277 pvvD~dG~IWVGT~-~gGLy~~d~-~g~~ 303 (626)
+.++ ++.||+... ++.|.++++ +|+.
T Consensus 251 iav~-~~~ly~td~~~~~V~~~~~~~G~~ 278 (349)
T 3v64_C 251 ITVF-EDSLYWTDWHTKSINSANKFTGKN 278 (349)
T ss_dssp EEEE-TTEEEEEETTTTEEEEEETTTCCS
T ss_pred EEEE-CCEEEEecCCCCeEEEEEccCCCc
Confidence 6665 788888875 467889984 5653
No 91
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.85 E-value=0.0051 Score=66.57 Aligned_cols=229 Identities=10% Similarity=0.031 Sum_probs=131.3
Q ss_pred eeeEEee---CCEEEEEeC-CcEEEEcC-CCCEEEEEeCCCCCCcccCeEEecCCeEEEEEC------CeEEEEECCCCc
Q 006913 40 SKPLIGE---DGKIYACSE-KTLFAFES-NGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAE------NRVLKVDLLKIG 108 (626)
Q Consensus 40 Sspvid~---dG~IwIgSd-ggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~dG~IwVgT~------ggL~~id~~~~~ 108 (626)
..+++|. +|.||++.. +.|++++. +|.+.. ..... .....+.+|.+|+||++.. .+++.+++....
T Consensus 142 ~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~-~~~~~--~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~ 218 (433)
T 4hw6_A 142 WRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDI-KTTNI--GQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGF 218 (433)
T ss_dssp CEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEE-ECCCC--SCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTT
T ss_pred ceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEE-eecCC--CCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCe
Confidence 3557775 499999874 78999998 666542 21111 2234677889999999862 257777654331
Q ss_pred cccceeEEEecCCCCCCCCCCeeEEEEEEc-CCeEEEEEcC-CeEEEEeCC-CcEEEEECCcccccccccccccCCCCCc
Q 006913 109 TSESATQVFYGTGSGKGGTGAIAGIAVSTS-SSSVYINVKG-RALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCY 185 (626)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~-dG~LwIgT~~-gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~ 185 (626)
. .. ...... ... ..+..+. +|+||++... +.|++++++ |....... ..+. . .
T Consensus 219 ~-~~---~~~~~~------~~P-~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~--------~~~~-~-----~ 273 (433)
T 4hw6_A 219 T-ER---LSLCNA------RGA-KTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEV--------MMDT-K-----G 273 (433)
T ss_dssp C-CE---EEEEEC------SSB-CCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEE--------ECSC-C-----S
T ss_pred e-cc---cccccc------CCC-CEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEe--------ccCC-C-----C
Confidence 0 00 000000 001 1133455 8999998754 569999986 76633220 0000 0 0
Q ss_pred cccceEEEcCCCe-EEEEcC-CCeEEEEeCC--CCeE----EEEEcCC--C----------CCcceeeee---------e
Q 006913 186 FTSVPVIDQCEGS-IYISNT-QGELYSLSAH--SPYF----NWIQDLS--S----------FDKAFTLTP---------G 236 (626)
Q Consensus 186 i~sspviD~~dG~-LwIGT~-~GgL~~ld~~--tg~~----~w~~~~~--s----------~~~v~sI~~---------D 236 (626)
....+++++ +|+ ||+... ++.|++++.+ ++.+ .+.-..+ + +.....++. |
T Consensus 274 ~~~~ia~dp-dG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd 352 (433)
T 4hw6_A 274 SNFHIVWHP-TGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEE 352 (433)
T ss_dssp SCEEEEECT-TSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSS
T ss_pred CcccEEEeC-CCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccC
Confidence 112367776 555 999875 5678887755 3332 1111111 0 122345777 8
Q ss_pred cCCeEEEEEcCCCEEEEEECCCCcEEEEEecCC----------CC-----CceeeEEEe-eCCeEEEEEc-CCeEEEEc
Q 006913 237 NNGYLYVTIPVRALVLALDTSSGNILWHKSVGP----------LG-----SAEYAPVVD-SNGWISVGSL-DGLLYSFS 298 (626)
Q Consensus 237 ~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~----------l~-----~~~sspvvD-~dG~IWVGT~-~gGLy~~d 298 (626)
.+|+|||+...+..+..+++ +|.+......+. +. .....++++ .+|+|||+.. ++.|.+++
T Consensus 353 ~~g~lyvaD~~n~~I~~~~~-~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~ 430 (433)
T 4hw6_A 353 DEYDFYFCDRDSHTVRVLTP-EGRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIA 430 (433)
T ss_dssp CCEEEEEEETTTTEEEEECT-TSEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEE
T ss_pred CCCcEEEEECCCCEEEEECC-CCCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEe
Confidence 89999999877788988985 776543321110 00 113457788 7899999874 34555554
No 92
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.84 E-value=0.01 Score=63.05 Aligned_cols=226 Identities=13% Similarity=0.030 Sum_probs=130.4
Q ss_pred eeCCEEEEEeCCcEEEEcCCC-CEEEEEeCCCCCCcccCeEEe-cCCeEEEEE--CCeEEEEECCCCccccceeEEEecC
Q 006913 45 GEDGKIYACSEKTLFAFESNG-TIAWSLDLDFTCNIGTAPVHG-GTGEVYIVA--ENRVLKVDLLKIGTSESATQVFYGT 120 (626)
Q Consensus 45 d~dG~IwIgSdggL~a~d~~G-~~~W~~~~~~~~~i~~sp~iD-~dG~IwVgT--~ggL~~id~~~~~~~~~~~~~~~~~ 120 (626)
+..+.|+++..+.|..++.++ ...... ... .....+..| .++.||+.. .+.|+++++++.. .......
T Consensus 85 ~~~~~l~~~~~~~I~~i~~~~~~~~~~~-~~~--~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~-----~~~~~~~ 156 (386)
T 3v65_B 85 GPEPVLLFANRIDIRQVLPHRSEYTLLL-NNL--ENAIALDFHHRRELVFWSDVTLDRILRANLNGSN-----VEEVVST 156 (386)
T ss_dssp SSCCEEEEECBSCEEEECTTSCCCEEEE-CSC--SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCC-----EEEEECS
T ss_pred cccceeEeecCccceeeccCCCcEEEEe-cCC--CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCC-----cEEEEeC
Confidence 345667777777899998854 322111 111 123355666 578899886 6789999988752 1111111
Q ss_pred CCCCCCCCCeeEEEEEE-cCCeEEEEEcC-CeEEEEeCCCcEEEEECCcccccccccccccCCCCCccccceEEEcCCCe
Q 006913 121 GSGKGGTGAIAGIAVST-SSSSVYINVKG-RALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGS 198 (626)
Q Consensus 121 ~~~~~~~~~~I~s~~~d-~dG~LwIgT~~-gGL~a~d~~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~ 198 (626)
.. ....+ +..+ .+++||+.... +.|..++++|...-... . ..+ .....+++|+.++.
T Consensus 157 ~~-----~~p~g-lavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~--------~----~~l---~~P~giavdp~~g~ 215 (386)
T 3v65_B 157 GL-----ESPGG-LAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL--------W----QSL---EKPRAIALHPMEGT 215 (386)
T ss_dssp SC-----SCCCC-EEEETTTTEEEEEETTTTEEEECBTTSCSCEEEE--------C----SSC---SCEEEEEEETTTTE
T ss_pred CC-----CCccE-EEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEee--------c----CCC---CCCcEEEEEcCCCe
Confidence 10 11122 3345 57899887653 66888888764322110 0 000 01234677854788
Q ss_pred EEEEcCC--CeEEEEeCCCCeEEEEEcCCCCCcceeeeee-cCCeEEEEEcCCCEEEEEECCCCcEEEEEecCCCCCcee
Q 006913 199 IYISNTQ--GELYSLSAHSPYFNWIQDLSSFDKAFTLTPG-NNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEY 275 (626)
Q Consensus 199 LwIGT~~--GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D-~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~~~s 275 (626)
||+.... +.|++++.++......... .......++.| .+++||++....+.|..+|........... ..+ ....
T Consensus 216 ly~td~~~~~~I~r~~~dG~~~~~~~~~-~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~-~~~-~~P~ 292 (386)
T 3v65_B 216 IYWTDWGNTPRIEASSMDGSGRRIIADT-HLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVIS-QGL-PHPF 292 (386)
T ss_dssp EEEEECSSSCEEEEEETTSCSCEEEECS-SCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEEC-SSC-SSEE
T ss_pred EEEeccCCCCEEEEEeCCCCCcEEEEEC-CCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEE-CCC-CCce
Confidence 9988753 5799999887544333221 22334567888 578999998777789999864332222221 111 1234
Q ss_pred eEEEeeCCeEEEEEc-CCeEEEEcC-CCCE
Q 006913 276 APVVDSNGWISVGSL-DGLLYSFSP-SGVL 303 (626)
Q Consensus 276 spvvD~dG~IWVGT~-~gGLy~~d~-~g~~ 303 (626)
.+.++ ++.||+... ++.|.++++ +|+.
T Consensus 293 giav~-~~~ly~td~~~~~V~~~~~~~G~~ 321 (386)
T 3v65_B 293 AITVF-EDSLYWTDWHTKSINSANKFTGKN 321 (386)
T ss_dssp EEEEE-TTEEEEEETTTTEEEEEETTTCCS
T ss_pred EEEEE-CCEEEEeeCCCCeEEEEECCCCcc
Confidence 46666 678888764 567889984 5653
No 93
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.84 E-value=0.0058 Score=64.61 Aligned_cols=106 Identities=14% Similarity=0.162 Sum_probs=65.1
Q ss_pred ceEEEcCCCeEEEEcC------------------CCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCC-eEEEEEcCCC
Q 006913 189 VPVIDQCEGSIYISNT------------------QGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNG-YLYVTIPVRA 249 (626)
Q Consensus 189 spviD~~dG~LwIGT~------------------~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG-~LwVGT~~gG 249 (626)
..++++ +|.+|+++. .|.||++++. +.....+ .......++.+.|| .||++.....
T Consensus 169 D~~v~~-~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~~~~~~~--~l~~pNGia~spDg~~lYvadt~~~ 243 (355)
T 3sre_A 169 DIVAVG-PEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--DVRVVAE--GFDFANGINISPDGKYVYIAELLAH 243 (355)
T ss_dssp EEEEEE-TTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--CCEEEEE--EESSEEEEEECTTSSEEEEEEGGGT
T ss_pred eEEEeC-CCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--eEEEeec--CCcccCcceECCCCCEEEEEeCCCC
Confidence 367786 899999864 2679999884 2222111 12233456777777 8999976667
Q ss_pred EEEEEECC-CCcEEEEEecCCCCCceeeEEEee-CCeEEEEEc-C-CeEEEEcCC
Q 006913 250 LVLALDTS-SGNILWHKSVGPLGSAEYAPVVDS-NGWISVGSL-D-GLLYSFSPS 300 (626)
Q Consensus 250 ~l~alD~~-tG~~~w~~~~~~l~~~~sspvvD~-dG~IWVGT~-~-gGLy~~d~~ 300 (626)
.+++++.. +|+........ .....-.+.+|. +|++|++.. + +.|.+++|+
T Consensus 244 ~I~~~~~~~~g~l~~~~~~~-~~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~P~ 297 (355)
T 3sre_A 244 KIHVYEKHANWTLTPLRVLS-FDTLVDNISVDPVTGDLWVGCHPNGMRIFFYDAE 297 (355)
T ss_dssp EEEEEEECTTSCEEEEEEEE-CSSEEEEEEECTTTCCEEEEEESCHHHHHSCCTT
T ss_pred eEEEEEECCCCcEecCEEEe-CCCCCceEEEeCCCCcEEEEecCCceEEEEECCC
Confidence 88888753 45543211111 112344578898 599999764 3 356667775
No 94
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.83 E-value=0.00041 Score=72.58 Aligned_cols=153 Identities=12% Similarity=0.091 Sum_probs=100.6
Q ss_pred ceEEEcCCCeEEEEc-CCCeEEEEeCCCCeEEEEEcCCCC-------Ccceeeee---ecCCeEEEEEcC----------
Q 006913 189 VPVIDQCEGSIYISN-TQGELYSLSAHSPYFNWIQDLSSF-------DKAFTLTP---GNNGYLYVTIPV---------- 247 (626)
Q Consensus 189 spviD~~dG~LwIGT-~~GgL~~ld~~tg~~~w~~~~~s~-------~~v~sI~~---D~dG~LwVGT~~---------- 247 (626)
++..|..++.+|++. +.+.|+.+++.++...-. ..+.. .....+.. |.+|+|||....
T Consensus 17 ~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~ 95 (334)
T 2p9w_A 17 DTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQS 95 (334)
T ss_dssp CEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCC
T ss_pred CccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccc
Confidence 355664479999998 589999999987654433 22211 12356777 678999996431
Q ss_pred ---CCEEEEEECC---CCcEEEEEecCCC-----------CCceeeEEEeeCCeEEE-EEcC-CeEEEEcCCCC--EEEE
Q 006913 248 ---RALVLALDTS---SGNILWHKSVGPL-----------GSAEYAPVVDSNGWISV-GSLD-GLLYSFSPSGV--LNKF 306 (626)
Q Consensus 248 ---gG~l~alD~~---tG~~~w~~~~~~l-----------~~~~sspvvD~dG~IWV-GT~~-gGLy~~d~~g~--~~~~ 306 (626)
...++++|.. +|+..|...+... ......+++|.+|++|| ++.. +.|++++++|+ ..|+
T Consensus 96 ~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~ 175 (334)
T 2p9w_A 96 SHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVSTFA 175 (334)
T ss_dssp SSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEEEE
T ss_pred cCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEeeee
Confidence 3578999988 8999998764310 01245788999999999 8888 89999999986 2344
Q ss_pred eeccCCCCccccCceEEEEEEecCCcEEEEEeeecCeeEEe
Q 006913 307 SKSDTSDSVIQSSPYWFHLLGPSIGLKAILCLMVVGQFSSL 347 (626)
Q Consensus 307 ~~~~~~~~~ilssp~V~~Il~DsdG~IwI~T~t~~Ggl~~~ 347 (626)
... +... .-.....|....+|++.|...+ .|.|..+
T Consensus 176 ~~~-~~~~---~~~G~nGIv~~pdg~~Liv~~~-~g~L~~f 211 (334)
T 2p9w_A 176 WES-GNGG---QRPGYSGITFDPHSNKLIAFGG-PRALTAF 211 (334)
T ss_dssp ECC-CCSS---SCCSCSEEEEETTTTEEEEESS-SSSEEEE
T ss_pred ecC-CCcc---cccCcceEEEeCCCCEEEEEcC-CCeEEEE
Confidence 331 1111 1111235667778877766665 6666544
No 95
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.83 E-value=0.0078 Score=61.01 Aligned_cols=176 Identities=14% Similarity=0.070 Sum_probs=110.2
Q ss_pred cCeEEecCCeEEEEE--CCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEcC-CeEEEEeCC
Q 006913 81 TAPVHGGTGEVYIVA--ENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKG-RALFAFMTH 157 (626)
Q Consensus 81 ~sp~iD~dG~IwVgT--~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~~-gGL~a~d~~ 157 (626)
..+..+ ++.||+++ ++.|.++|+++++.. ... .+. ...+--+...+++||+.++. +-++.||+.
T Consensus 58 qGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~---~~~-l~~--------~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~ 124 (268)
T 3nok_A 58 QGLVFH-QGHFFESTGHQGTLRQLSLESAQPV---WME-RLG--------NIFAEGLASDGERLYQLTWTEGLLFTWSGM 124 (268)
T ss_dssp EEEEEE-TTEEEEEETTTTEEEECCSSCSSCS---EEE-ECT--------TCCEEEEEECSSCEEEEESSSCEEEEEETT
T ss_pred ceEEEE-CCEEEEEcCCCCEEEEEECCCCcEE---eEE-CCC--------CcceeEEEEeCCEEEEEEccCCEEEEEECC
Confidence 345554 58999998 567999999987531 111 221 12222223357899999865 557889975
Q ss_pred -CcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcCCCeEEEEeCCCCeEEEEEcCCC----CCccee
Q 006913 158 -GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSS----FDKAFT 232 (626)
Q Consensus 158 -G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s----~~~v~s 232 (626)
++.+-.+ .+. .. -..+..| ++.||++...+.|+.+|+++.++.-...... ......
T Consensus 125 Tl~~~~ti-------~~~---~e-------GwGLt~D--g~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNe 185 (268)
T 3nok_A 125 PPQRERTT-------RYS---GE-------GWGLCYW--NGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINE 185 (268)
T ss_dssp TTEEEEEE-------ECS---SC-------CCCEEEE--TTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEE
T ss_pred cCcEEEEE-------eCC---Cc-------eeEEecC--CCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccc
Confidence 7766554 110 00 0224456 7899999888899999999987765433221 111122
Q ss_pred eeeecCCeEEEEEcCCCEEEEEECCCCcEEEEEecCC-----------CCCceeeEEEeeC-CeEEEEE
Q 006913 233 LTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGP-----------LGSAEYAPVVDSN-GWISVGS 289 (626)
Q Consensus 233 I~~D~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~-----------l~~~~sspvvD~d-G~IWVGT 289 (626)
+. -.+|.||+.......+..+|+.+|++.-...... ...+...++.|++ +++||..
T Consensus 186 Le-~~dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 186 LE-CANGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp EE-EETTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred cE-EeCCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 22 2389999998767799999999999875543321 1124556777653 5677654
No 96
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=97.80 E-value=0.017 Score=58.02 Aligned_cols=234 Identities=12% Similarity=0.045 Sum_probs=130.7
Q ss_pred eeEEeeCCE-EEEEe--CCcEEEEcC-CCCE-EEEEeCCCCCCcccCeEEecCCeEEEEE-CC----eEEEEECCCCccc
Q 006913 41 KPLIGEDGK-IYACS--EKTLFAFES-NGTI-AWSLDLDFTCNIGTAPVHGGTGEVYIVA-EN----RVLKVDLLKIGTS 110 (626)
Q Consensus 41 spvid~dG~-IwIgS--dggL~a~d~-~G~~-~W~~~~~~~~~i~~sp~iD~dG~IwVgT-~g----gL~~id~~~~~~~ 110 (626)
.+.++.+|. +|++. ++.++.+|. +++. ........ .....+..+.+|+..++. .+ .|..+|..++..
T Consensus 44 ~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~- 120 (331)
T 3u4y_A 44 DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQ--SSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKF- 120 (331)
T ss_dssp EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECS--SCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEE-
T ss_pred eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCC--CCccceEECCCCCEEEEecCCCCcccEEEEECCCCCe-
Confidence 666767775 88876 457999998 7765 43333221 122236777888744444 33 799999887631
Q ss_pred cceeEEEecCCCCCCCCCCeeEEEEEEcCCe-EEEEEcC-Ce-EEEEeC--CCcEEEEECCcccccccccccccCCCCCc
Q 006913 111 ESATQVFYGTGSGKGGTGAIAGIAVSTSSSS-VYINVKG-RA-LFAFMT--HGQLLWSAGPVLDQLGYRQGCTKTDVDCY 185 (626)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~-LwIgT~~-gG-L~a~d~--~G~~~w~~~~~~~~~~~~~~~~~~l~~~~ 185 (626)
...+.. +.....+....+|+ ||++... +. +..++. +|...... . .... . +..
T Consensus 121 ----~~~~~~-------~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~-~--~~~~------~---~~~ 177 (331)
T 3u4y_A 121 ----ISTIPI-------PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTG-Q--EFIS------G---GTR 177 (331)
T ss_dssp ----EEEEEC-------CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEE-E--EEEC------S---SSS
T ss_pred ----EEEEEC-------CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecC-C--cccc------C---CCC
Confidence 111111 11123444556664 8887554 56 666664 35442210 0 0000 0 001
Q ss_pred cccceEEEcCCCe-EEEEcC-CCeEEEEeCCCCeE---EEEEcCCCCCcceeeeeecCCe-EEEEEcCCCEEEEEECCCC
Q 006913 186 FTSVPVIDQCEGS-IYISNT-QGELYSLSAHSPYF---NWIQDLSSFDKAFTLTPGNNGY-LYVTIPVRALVLALDTSSG 259 (626)
Q Consensus 186 i~sspviD~~dG~-LwIGT~-~GgL~~ld~~tg~~---~w~~~~~s~~~v~sI~~D~dG~-LwVGT~~gG~l~alD~~tG 259 (626)
...+.+++ +|. +|++.. ++.|..+|.++++. ....... ..+..++.+.||+ ||++....+.+..+|..++
T Consensus 178 -~~~~~~sp-dg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~--~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~ 253 (331)
T 3u4y_A 178 -PFNITFTP-DGNFAFVANLIGNSIGILETQNPENITLLNAVGTN--NLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSG 253 (331)
T ss_dssp -EEEEEECT-TSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS--SCCCCEEECTTSSEEEEECSSEEEEEEEETTTT
T ss_pred -ccceEECC-CCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC--CCCceEEECCCCCEEEEEEcCCCEEEEEECCCC
Confidence 13355665 554 888764 67799999988876 4333322 2334566777886 8887654567888999888
Q ss_pred cEEEE--EecC--CCCCc---eeeEEEeeCC-eEEEEEcC-CeEEEEcCCCCEE
Q 006913 260 NILWH--KSVG--PLGSA---EYAPVVDSNG-WISVGSLD-GLLYSFSPSGVLN 304 (626)
Q Consensus 260 ~~~w~--~~~~--~l~~~---~sspvvD~dG-~IWVGT~~-gGLy~~d~~g~~~ 304 (626)
+.... .... ..... ...+...++| .||++..+ +.|..++..+...
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~ 307 (331)
T 3u4y_A 254 TLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKVV 307 (331)
T ss_dssp EEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEE
T ss_pred ceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCcc
Confidence 87332 2211 00011 1235666666 47887754 4677888655443
No 97
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.80 E-value=0.0045 Score=66.85 Aligned_cols=226 Identities=11% Similarity=0.085 Sum_probs=126.8
Q ss_pred CeEEe--cCCeEEEEE-CCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEcCCe-EEEEEcCC-----eEE
Q 006913 82 APVHG--GTGEVYIVA-ENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSS-VYINVKGR-----ALF 152 (626)
Q Consensus 82 sp~iD--~dG~IwVgT-~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~-LwIgT~~g-----GL~ 152 (626)
.+.+| .+|+||++. .+.|.++|++++.. ...... ......+..+.+|+ ||++...+ .++
T Consensus 141 ~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v-----~~~~~~-------~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~ 208 (430)
T 3tc9_A 141 WLSFDPKNHNHLYLVGEQHPTRLIDFEKEYV-----STVYSG-------LSKVRTICWTHEADSMIITNDQNNNDRPNNY 208 (430)
T ss_dssp EEEEETTEEEEEEEEEBTEEEEEEETTTTEE-----EEEECC-------CSCEEEEEECTTSSEEEEEECCSCTTSEEEE
T ss_pred EEEECCCCCCeEEEEeCCCcEEEEECCCCEE-----EEEecC-------CCCcceEEEeCCCCEEEEEeCCCCcccceEE
Confidence 45678 468999987 48899999987531 111110 11223344566666 99987532 466
Q ss_pred EEeCCCcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcC-CCeEEEEeCCCCeEEEEEcCCCCCcce
Q 006913 153 AFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNT-QGELYSLSAHSPYFNWIQDLSSFDKAF 231 (626)
Q Consensus 153 a~d~~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~-~GgL~~ld~~tg~~~w~~~~~s~~~v~ 231 (626)
.++++|...... . +..+. -...+++++.+|.||++.. ++.|++++++++........+......
T Consensus 209 ~~~~~g~~~~~~-~-l~~~~-------------~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~ 273 (430)
T 3tc9_A 209 ILTRESGFKVIT-E-LTKGQ-------------NCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEF 273 (430)
T ss_dssp EEEGGGTSCSEE-E-EEECS-------------SCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCE
T ss_pred EEeCCCceeeee-e-eccCC-------------CceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcce
Confidence 677665432110 0 00000 0123566643789999875 578999999987653222222222345
Q ss_pred eeeeecCCe-EEEEEcCCCEEEEEECC--CCcEE----EEEecCC--CC-------Cc--ee-eEEE--------eeCCe
Q 006913 232 TLTPGNNGY-LYVTIPVRALVLALDTS--SGNIL----WHKSVGP--LG-------SA--EY-APVV--------DSNGW 284 (626)
Q Consensus 232 sI~~D~dG~-LwVGT~~gG~l~alD~~--tG~~~----w~~~~~~--l~-------~~--~s-spvv--------D~dG~ 284 (626)
.++.+.+|+ ||+.......++.++.. ++.+. ..-..+. .. .+ .. .+++ |.+|+
T Consensus 274 gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~ 353 (430)
T 3tc9_A 274 HIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYD 353 (430)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEE
T ss_pred eEEEcCCCCEEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCe
Confidence 678888887 99998766788776532 33321 1111010 00 00 11 2334 35689
Q ss_pred EEEEEc-CCeEEEEcCCCCEEEEeecc----CC--CC-----ccccCceEEEEEEec-CCcEEEE
Q 006913 285 ISVGSL-DGLLYSFSPSGVLNKFSKSD----TS--DS-----VIQSSPYWFHLLGPS-IGLKAIL 336 (626)
Q Consensus 285 IWVGT~-~gGLy~~d~~g~~~~~~~~~----~~--~~-----~ilssp~V~~Il~Ds-dG~IwI~ 336 (626)
|||... ++.|.+++++|.+....... .. ++ ..+..| ..|..|. +|.|||.
T Consensus 354 lyvaD~~n~~I~~i~~~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P--~giavd~~~g~lyVa 416 (430)
T 3tc9_A 354 FYFCDRENHCIRILTPQGRVTTFAGRGSNGTSGYNDGDLRQEARFNHP--EGIVYDEERECFFIG 416 (430)
T ss_dssp EEEEEGGGTEEEEECTTSEEEEEEECCTTSSSSCBCEETTTTCBCSSE--EEEEEETTTTEEEEE
T ss_pred EEEEECCCcEEEEECCCCcEEEEEeCCCCCCCcccCCCchhhcEeCCC--cEEEEECCCCEEEEE
Confidence 999974 56899999988765543310 00 11 001223 4688887 6999965
No 98
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.79 E-value=0.023 Score=58.61 Aligned_cols=264 Identities=11% Similarity=0.061 Sum_probs=129.3
Q ss_pred CccccccccceeeeeccCCCccccc--cCCceeeeeEEeeCCEEEEEe-CCcEEEEcCCCCEEEEEeCCC---CCCcccC
Q 006913 9 FHSYRSCFPFLTFASFSSSAKVPYR--RSAFRLSKPLIGEDGKIYACS-EKTLFAFESNGTIAWSLDLDF---TCNIGTA 82 (626)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~Sspvid~dG~IwIgS-dggL~a~d~~G~~~W~~~~~~---~~~i~~s 82 (626)
.|+.-+.||..++.|--....+... +.............+.+|++. .+.|++-...|+ .|...... ....+.+
T Consensus 6 ~~~~~~~~~~~~~~s~d~g~~W~~~~~~~~~~~~~v~~~~~~~~~~~G~~g~i~~s~DgG~-tW~~~~~~~~~~~~~~~~ 84 (327)
T 2xbg_A 6 HHHHHGLVPRGSAIPALDYNPWEAIQLPTTATILDMSFIDRHHGWLVGVNATLMETRDGGQ-TWEPRTLVLDHSDYRFNS 84 (327)
T ss_dssp ------------CCCBCSSCCEEEEECSCSSCEEEEEESSSSCEEEEETTTEEEEESSTTS-SCEECCCCCSCCCCEEEE
T ss_pred cccccCccccceeecCCCCCCceEeecCCCCcEEEEEECCCCcEEEEcCCCeEEEeCCCCC-CCeECCCCCCCCCccEEE
Confidence 3566677777777666655544222 222333444444567788765 455655443343 56543221 0112345
Q ss_pred eEEecCCeEEEEE-CCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEcCCeEEEEeCCCcEE
Q 006913 83 PVHGGTGEVYIVA-ENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTHGQLL 161 (626)
Q Consensus 83 p~iD~dG~IwVgT-~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~~gGL~a~d~~G~~~ 161 (626)
+..+. +.+|++. .++|++ ..+.+. .|....... ...+.. ..+....++.+|+++..++|+.-.-.|+ .
T Consensus 85 i~~~~-~~~~~~g~~g~i~~-S~DgG~------tW~~~~~~~-~~~~~~-~~i~~~~~~~~~~~~~~g~v~~S~DgG~-t 153 (327)
T 2xbg_A 85 VSFQG-NEGWIVGEPPIMLH-TTDGGQ------SWSQIPLDP-KLPGSP-RLIKALGNGSAEMITNVGAIYRTKDSGK-N 153 (327)
T ss_dssp EEEET-TEEEEEEETTEEEE-ESSTTS------SCEECCCCT-TCSSCE-EEEEEEETTEEEEEETTCCEEEESSTTS-S
T ss_pred EEecC-CeEEEEECCCeEEE-ECCCCC------CceECcccc-CCCCCe-EEEEEECCCCEEEEeCCccEEEEcCCCC-C
Confidence 55554 7888876 566665 455443 232211110 011222 3333446788999887666665433354 4
Q ss_pred EEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcCCCeEEEEeCCCCeEEEEEc-CCCCCcceeeeeecCCe
Q 006913 162 WSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQD-LSSFDKAFTLTPGNNGY 240 (626)
Q Consensus 162 w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~-~~s~~~v~sI~~D~dG~ 240 (626)
|.... .+ .. ..+ ..+..+. ++.+|+....|+++.-+-.+| ..|... ......+..++.+.+|+
T Consensus 154 W~~~~----~~--------~~-~~~-~~~~~~~-~~~~~~~g~~G~~~~S~d~gG-~tW~~~~~~~~~~~~~~~~~~~g~ 217 (327)
T 2xbg_A 154 WQALV----QE--------AI-GVM-RNLNRSP-SGEYVAVSSRGSFYSTWEPGQ-TAWEPHNRTTSRRLHNMGFTPDGR 217 (327)
T ss_dssp EEEEE----CS--------CC-CCE-EEEEECT-TSCEEEEETTSSEEEEECTTC-SSCEEEECCSSSCEEEEEECTTSC
T ss_pred CEEee----cC--------CC-cce-EEEEEcC-CCcEEEEECCCcEEEEeCCCC-CceeECCCCCCCccceeEECCCCC
Confidence 76310 00 00 112 2344554 778887766777877643222 235432 11122345666778899
Q ss_pred EEEEEcCCCEEEEEECCCCcEEEEEecCC-C-C-CceeeEEEeeCCeEEEEEcCCeEEEEcCCCC
Q 006913 241 LYVTIPVRALVLALDTSSGNILWHKSVGP-L-G-SAEYAPVVDSNGWISVGSLDGLLYSFSPSGV 302 (626)
Q Consensus 241 LwVGT~~gG~l~alD~~tG~~~w~~~~~~-l-~-~~~sspvvD~dG~IWVGT~~gGLy~~d~~g~ 302 (626)
+|+++. +|.++.-+ .++-..|.....+ + . ..+..+..++++.+|+++.++.|++-...|+
T Consensus 218 ~~~~~~-~G~~~~s~-~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i~~S~DgG~ 280 (327)
T 2xbg_A 218 LWMIVN-GGKIAFSD-PDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGALLCSQDGGQ 280 (327)
T ss_dssp EEEEET-TTEEEEEE-TTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEESTTCEEEESSTTS
T ss_pred EEEEeC-CceEEEec-CCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeCCCeEEEeCCCCc
Confidence 999885 45665442 2444567532211 1 1 1234455666789999988777876544453
No 99
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=97.73 E-value=0.095 Score=59.66 Aligned_cols=237 Identities=9% Similarity=-0.057 Sum_probs=133.9
Q ss_pred eeeeEEeeCCEE-EEEe-CCcEEEEcC-CCCEEEEEeCCCCCCcccCeEEecCCe-EEEEE-CCeEEEEECCCCccccce
Q 006913 39 LSKPLIGEDGKI-YACS-EKTLFAFES-NGTIAWSLDLDFTCNIGTAPVHGGTGE-VYIVA-ENRVLKVDLLKIGTSESA 113 (626)
Q Consensus 39 ~Sspvid~dG~I-wIgS-dggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~dG~-IwVgT-~ggL~~id~~~~~~~~~~ 113 (626)
........+|.. .+|+ ++.+..+|. +|.....+.... ..+.++....+|. |.+++ ++.|..+|..++..
T Consensus 16 v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~--~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~---- 89 (814)
T 3mkq_A 16 VKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTE--TPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEK---- 89 (814)
T ss_dssp EEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCS--SCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCE----
T ss_pred eEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCC--CcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcE----
Confidence 334445456654 4455 567888886 777655444221 2344556666666 44455 68888899877631
Q ss_pred eEEEecCCCCCCCCCCeeEEEEEEcCC-eEEEEEcCCeEEEEeCC-C-cEEEEECCcccccccccccccCCCCCccccce
Q 006913 114 TQVFYGTGSGKGGTGAIAGIAVSTSSS-SVYINVKGRALFAFMTH-G-QLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVP 190 (626)
Q Consensus 114 ~~~~~~~~~~~~~~~~~I~s~~~d~dG-~LwIgT~~gGL~a~d~~-G-~~~w~~~~~~~~~~~~~~~~~~l~~~~i~ssp 190 (626)
...+.. . ...+..+....++ .|..++.++.+..++.. + ....... + + ...+ .++
T Consensus 90 -~~~~~~-----~-~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~------~------~---~~~v-~~~ 146 (814)
T 3mkq_A 90 -VVDFEA-----H-PDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFE------G------H---EHFV-MCV 146 (814)
T ss_dssp -EEEEEC-----C-SSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEE------C------C---SSCE-EEE
T ss_pred -EEEEec-----C-CCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEc------C------C---CCcE-EEE
Confidence 122211 1 1234444444444 57777777888888864 4 2222210 0 0 0111 223
Q ss_pred EEEc-CCCeEEEEcCCCeEEEEeCCCCeEEEEEcCCCCCcceeeeeec--CC-eEEEEEcCCCEEEEEECCCCcEEEEEe
Q 006913 191 VIDQ-CEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGN--NG-YLYVTIPVRALVLALDTSSGNILWHKS 266 (626)
Q Consensus 191 viD~-~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~--dG-~LwVGT~~gG~l~alD~~tG~~~w~~~ 266 (626)
...+ .+..|..++.+|.|..+|..++.............+..+.... +| .|.+++ .++.+..+|..++.......
T Consensus 147 ~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~-~dg~i~~~d~~~~~~~~~~~ 225 (814)
T 3mkq_A 147 AFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITAS-DDLTIKIWDYQTKSCVATLE 225 (814)
T ss_dssp EEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEEC-TTSEEEEEETTTTEEEEEEE
T ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEe-CCCEEEEEECCCCcEEEEEc
Confidence 3332 1346777888888999998776654443322112233333333 56 455555 56788889988888766544
Q ss_pred cCCCCCceeeEEEeeCC-eEEEEEcCCeEEEEcCC-CCEEEEe
Q 006913 267 VGPLGSAEYAPVVDSNG-WISVGSLDGLLYSFSPS-GVLNKFS 307 (626)
Q Consensus 267 ~~~l~~~~sspvvD~dG-~IWVGT~~gGLy~~d~~-g~~~~~~ 307 (626)
.. ...+..+...++| .|..|+.++.|..+|.. ++.....
T Consensus 226 ~~--~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~ 266 (814)
T 3mkq_A 226 GH--MSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTL 266 (814)
T ss_dssp CC--SSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEE
T ss_pred CC--CCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEe
Confidence 32 1234556666666 57778888899999975 5555443
No 100
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.73 E-value=0.015 Score=58.84 Aligned_cols=175 Identities=13% Similarity=0.025 Sum_probs=107.7
Q ss_pred CCeEEEEEcCC---eEEEEeCC-CcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcC-CCeEEEEeC
Q 006913 139 SSSVYINVKGR---ALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNT-QGELYSLSA 213 (626)
Q Consensus 139 dG~LwIgT~~g---GL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~-~GgL~~ld~ 213 (626)
++.||+++-.. .|..+|+. |+.+-.. .++ ...+.-.+..+ ++.||+.++ ++-++.+|+
T Consensus 52 ~~~LyestG~~g~S~v~~vD~~Tgkv~~~~-----~l~----------~~~FgeGit~~--g~~ly~ltw~~~~v~v~D~ 114 (262)
T 3nol_A 52 NGYFYESTGLNGRSSIRKVDIESGKTLQQI-----ELG----------KRYFGEGISDW--KDKIVGLTWKNGLGFVWNI 114 (262)
T ss_dssp TTEEEEEEEETTEEEEEEECTTTCCEEEEE-----ECC----------TTCCEEEEEEE--TTEEEEEESSSSEEEEEET
T ss_pred CCEEEEECCCCCCceEEEEECCCCcEEEEE-----ecC----------CccceeEEEEe--CCEEEEEEeeCCEEEEEEC
Confidence 78999998543 58999985 8876553 111 01121123455 789999997 567899999
Q ss_pred CCCeEEEEEcCCCCCcceeeeeecCCeEEEEEcCCCEEEEEECCCCcEEEEEecCCCCC---ceeeEEEeeCCeEEEEEc
Q 006913 214 HSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGS---AEYAPVVDSNGWISVGSL 290 (626)
Q Consensus 214 ~tg~~~w~~~~~s~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~---~~sspvvD~dG~IWVGT~ 290 (626)
++.+..-..+.+.. -..++.| .++||+.. +...+..+|+.+.++.-.......+. ....+... +|.||+..+
T Consensus 115 ~t~~~~~ti~~~~e--G~glt~d-g~~L~~Sd-Gs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w 189 (262)
T 3nol_A 115 RNLRQVRSFNYDGE--GWGLTHN-DQYLIMSD-GTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVW 189 (262)
T ss_dssp TTCCEEEEEECSSC--CCCEEEC-SSCEEECC-SSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEET
T ss_pred ccCcEEEEEECCCC--ceEEecC-CCEEEEEC-CCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEc
Confidence 99887765444321 1234444 46888875 46789999999998876554431111 12223333 899999985
Q ss_pred -CCeEEEEcCC-CCEEEEeeccC----CCCccccCceEEEEEEecC-CcEEE
Q 006913 291 -DGLLYSFSPS-GVLNKFSKSDT----SDSVIQSSPYWFHLLGPSI-GLKAI 335 (626)
Q Consensus 291 -~gGLy~~d~~-g~~~~~~~~~~----~~~~ilssp~V~~Il~Dsd-G~IwI 335 (626)
.+.|+++|+. |++........ ...........+.|..|.+ +++|+
T Consensus 190 ~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfV 241 (262)
T 3nol_A 190 QTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFV 241 (262)
T ss_dssp TSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEE
T ss_pred cCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEE
Confidence 6789999985 88765443210 0000012234567887764 55653
No 101
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.72 E-value=0.049 Score=54.39 Aligned_cols=237 Identities=12% Similarity=0.012 Sum_probs=131.7
Q ss_pred eeeeEEeeCCEEEE-Ee-CCcEEEEcC-CCCEEEEEeCCCCCCcccCeEEecCCeEEE-EE-CCeEEEEECCCCccccce
Q 006913 39 LSKPLIGEDGKIYA-CS-EKTLFAFES-NGTIAWSLDLDFTCNIGTAPVHGGTGEVYI-VA-ENRVLKVDLLKIGTSESA 113 (626)
Q Consensus 39 ~Sspvid~dG~IwI-gS-dggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~dG~IwV-gT-~ggL~~id~~~~~~~~~~ 113 (626)
........+|.+.+ |+ ++.+..++. +++....+.... ..+.++....++++.+ +. ++.|..+|..++..
T Consensus 26 v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~--~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~---- 99 (312)
T 4ery_A 26 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK--LGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKC---- 99 (312)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCS--SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE----
T ss_pred EEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCC--CceEEEEEcCCCCEEEEECCCCEEEEEECCCCcE----
Confidence 34445556665444 55 567888887 777654332211 2234555666777555 44 67888889877531
Q ss_pred eEEEecCCCCCCCCCCeeEEEEEEcC-CeEEEEEcCCeEEEEeCC-CcEEEEECCcccccccccccccCCCCCccccceE
Q 006913 114 TQVFYGTGSGKGGTGAIAGIAVSTSS-SSVYINVKGRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPV 191 (626)
Q Consensus 114 ~~~~~~~~~~~~~~~~~I~s~~~d~d-G~LwIgT~~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspv 191 (626)
...+.. . ...+.......+ ..|..++.++.|..+|.. ++....... + ... ..++.
T Consensus 100 -~~~~~~-----~-~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~------------~---~~~-v~~~~ 156 (312)
T 4ery_A 100 -LKTLKG-----H-SNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPA------------H---SDP-VSAVH 156 (312)
T ss_dssp -EEEEEC-----C-SSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECC------------C---SSC-EEEEE
T ss_pred -EEEEcC-----C-CCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecC------------C---CCc-EEEEE
Confidence 111111 1 123333333334 456667778889999975 766544310 0 011 13344
Q ss_pred EEcCCCeEEEEcCCCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCCe-EEEEEcCCCEEEEEECCCCcEEEEEecCCC
Q 006913 192 IDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGY-LYVTIPVRALVLALDTSSGNILWHKSVGPL 270 (626)
Q Consensus 192 iD~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG~-LwVGT~~gG~l~alD~~tG~~~w~~~~~~l 270 (626)
..+.+..|..|+.++.|..+|.++++............+..+....+|. |.+++ .++.+..+|..+++....+.....
T Consensus 157 ~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~ 235 (312)
T 4ery_A 157 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT-LDNTLKLWDYSKGKCLKTYTGHKN 235 (312)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEE-TTTEEEEEETTTTEEEEEECSSCC
T ss_pred EcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEc-CCCeEEEEECCCCcEEEEEEecCC
Confidence 4432445777888889999999887765433221122344556666775 44555 467888899988887655432211
Q ss_pred CC--ceeeEEEeeCCeEEEEEcCCeEEEEcCC-CCEEE
Q 006913 271 GS--AEYAPVVDSNGWISVGSLDGLLYSFSPS-GVLNK 305 (626)
Q Consensus 271 ~~--~~sspvvD~dG~IWVGT~~gGLy~~d~~-g~~~~ 305 (626)
.. .........+..|..|+.++.|+.+|.. ++...
T Consensus 236 ~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~ 273 (312)
T 4ery_A 236 EKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQ 273 (312)
T ss_dssp SSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEE
T ss_pred ceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhh
Confidence 11 1111122223456677788899999975 55443
No 102
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=97.72 E-value=0.044 Score=53.88 Aligned_cols=185 Identities=12% Similarity=0.045 Sum_probs=115.6
Q ss_pred CeEEecCCeEEEEE-CCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEE-cCCeEEEEEcCCeEEEEeCCCc
Q 006913 82 APVHGGTGEVYIVA-ENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVST-SSSSVYINVKGRALFAFMTHGQ 159 (626)
Q Consensus 82 sp~iD~dG~IwVgT-~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d-~dG~LwIgT~~gGL~a~d~~G~ 159 (626)
++..+ .+.+..++ ++.|..+|... ....+.. ....+....... .+..+..++.++.|..+|.. +
T Consensus 109 ~~~~~-~~~l~~~~~d~~i~~~d~~~-------~~~~~~~-----~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~-~ 174 (313)
T 3odt_A 109 SLSFQ-DGVVISGSWDKTAKVWKEGS-------LVYNLQA-----HNASVWDAKVVSFSENKFLTASADKTIKLWQND-K 174 (313)
T ss_dssp EEEEE-TTEEEEEETTSEEEEEETTE-------EEEEEEC-----CSSCEEEEEEEETTTTEEEEEETTSCEEEEETT-E
T ss_pred EEEec-CCEEEEEeCCCCEEEEcCCc-------EEEeccc-----CCCceeEEEEccCCCCEEEEEECCCCEEEEecC-c
Confidence 34443 34555566 67888888322 1222211 112233333344 56677788888888888843 3
Q ss_pred EEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcCCCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCC
Q 006913 160 LLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNG 239 (626)
Q Consensus 160 ~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG 239 (626)
....... . . ... ...+...+ ++.+..++.++.|..+|.++++........ ...+.++....+|
T Consensus 175 ~~~~~~~-------~----~---~~~-i~~~~~~~-~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~i~~~~~~~~~ 237 (313)
T 3odt_A 175 VIKTFSG-------I----H---NDV-VRHLAVVD-DGHFISCSNDGLIKLVDMHTGDVLRTYEGH-ESFVYCIKLLPNG 237 (313)
T ss_dssp EEEEECS-------S----C---SSC-EEEEEEEE-TTEEEEEETTSEEEEEETTTCCEEEEEECC-SSCEEEEEECTTS
T ss_pred eEEEEec-------c----C---ccc-EEEEEEcC-CCeEEEccCCCeEEEEECCchhhhhhhhcC-CceEEEEEEecCC
Confidence 3222200 0 0 011 23344554 777889999999999999988776554321 2346677777788
Q ss_pred eEEEEEcCCCEEEEEECCCCcEEEEEecCCCCCceeeEEEeeCCeEEEEEcCCeEEEEcCC
Q 006913 240 YLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPVVDSNGWISVGSLDGLLYSFSPS 300 (626)
Q Consensus 240 ~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~~~sspvvD~dG~IWVGT~~gGLy~~d~~ 300 (626)
.|..++. ++.+..+|..+++........ ...+..+...++|.+.+++.++.|..++..
T Consensus 238 ~l~~~~~-dg~v~iwd~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~~dg~i~iw~~~ 295 (313)
T 3odt_A 238 DIVSCGE-DRTVRIWSKENGSLKQVITLP--AISIWSVDCMSNGDIIVGSSDNLVRIFSQE 295 (313)
T ss_dssp CEEEEET-TSEEEEECTTTCCEEEEEECS--SSCEEEEEECTTSCEEEEETTSCEEEEESC
T ss_pred CEEEEec-CCEEEEEECCCCceeEEEecc--CceEEEEEEccCCCEEEEeCCCcEEEEeCC
Confidence 8888874 578999999999887665443 123556777778889999999999998864
No 103
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.72 E-value=0.051 Score=55.68 Aligned_cols=226 Identities=10% Similarity=0.011 Sum_probs=124.8
Q ss_pred EEEEeCCcEEEEcCCC-CEEEEEeCCCCCCcccCeEEec-CCeEEEEE--CCeEEEEECCCCccccceeEEEecCCCCCC
Q 006913 50 IYACSEKTLFAFESNG-TIAWSLDLDFTCNIGTAPVHGG-TGEVYIVA--ENRVLKVDLLKIGTSESATQVFYGTGSGKG 125 (626)
Q Consensus 50 IwIgSdggL~a~d~~G-~~~W~~~~~~~~~i~~sp~iD~-dG~IwVgT--~ggL~~id~~~~~~~~~~~~~~~~~~~~~~ 125 (626)
|++++.+.|..++.++ ...-... .. ....++..|. ++.||++. .+.|+++++++...... ........
T Consensus 4 ll~~~~~~I~~i~~~~~~~~~~~~-~~--~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~-~~~~~~~~---- 75 (316)
T 1ijq_A 4 LFFTNRHEVRKMTLDRSEYTSLIP-NL--RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSS-YDTVISRD---- 75 (316)
T ss_dssp EEEECBSSEEEEETTSCCCEEEEC-SC--SSEEEEEEETTTTEEEEEETTTTEEEEEEC---------CEEEECSS----
T ss_pred EEEECCCeEEEEECCCcceEehhc-CC--CceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcc-cEEEEeCC----
Confidence 4556666788888733 3221121 11 1233566775 57899886 57899999876100000 11111110
Q ss_pred CCCCeeEEEEEE-cCCeEEEEEc-CCeEEEEeCCCcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEc
Q 006913 126 GTGAIAGIAVST-SSSSVYINVK-GRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISN 203 (626)
Q Consensus 126 ~~~~~I~s~~~d-~dG~LwIgT~-~gGL~a~d~~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT 203 (626)
. ... ..+..+ .+++||+... .+.|..++.+|........ . .+ .....+++|+.++.||+..
T Consensus 76 ~-~~p-~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~--------~----~~---~~P~~iavdp~~g~ly~~d 138 (316)
T 1ijq_A 76 I-QAP-DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR--------E----NG---SKPRAIVVDPVHGFMYWTD 138 (316)
T ss_dssp C-SCC-CEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEE--------C----TT---CCEEEEEEETTTTEEEEEE
T ss_pred C-CCc-CEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEE--------C----CC---CCcceEEeCCCCCEEEEEc
Confidence 0 111 233445 5789998754 4778899988654322100 0 00 0123467784478899887
Q ss_pred CC--CeEEEEeCCCCeEEEEEcCCCCCcceeeeee-cCCeEEEEEcCCCEEEEEECCCCcEEEEEecCCCCCceeeEEEe
Q 006913 204 TQ--GELYSLSAHSPYFNWIQDLSSFDKAFTLTPG-NNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPVVD 280 (626)
Q Consensus 204 ~~--GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D-~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~~~sspvvD 280 (626)
.. +.|++++.++......... .......++.| .+++||++......+..+|.....................+.++
T Consensus 139 ~~~~~~I~~~~~dG~~~~~~~~~-~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~ 217 (316)
T 1ijq_A 139 WGTPAKIKKGGLNGVDIYSLVTE-NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF 217 (316)
T ss_dssp CSSSCEEEEEETTSCCEEEEECS-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE
T ss_pred cCCCCeEEEEcCCCCCeEEEEEC-CCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE
Confidence 63 6899999887544322221 22334567888 46799999876678999996533222212221101123456677
Q ss_pred eCCeEEEEEc-CCeEEEEcC-CCC
Q 006913 281 SNGWISVGSL-DGLLYSFSP-SGV 302 (626)
Q Consensus 281 ~dG~IWVGT~-~gGLy~~d~-~g~ 302 (626)
++.||+... ++.|+++++ +|+
T Consensus 218 -~~~ly~~d~~~~~V~~~~~~~g~ 240 (316)
T 1ijq_A 218 -EDKVFWTDIINEAIFSANRLTGS 240 (316)
T ss_dssp -TTEEEEEETTTTEEEEEETTTCC
T ss_pred -CCEEEEEECCCCeEEEEeCCCCc
Confidence 688888764 467899987 454
No 104
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.71 E-value=0.057 Score=54.96 Aligned_cols=255 Identities=11% Similarity=-0.023 Sum_probs=137.8
Q ss_pred EEEEe-CCcEEEEcC-CCCE--EEEEeCCCCCCcccCeEEecCCeEEEE-E-CCeEEEEECCCCccccceeEEEecCCCC
Q 006913 50 IYACS-EKTLFAFES-NGTI--AWSLDLDFTCNIGTAPVHGGTGEVYIV-A-ENRVLKVDLLKIGTSESATQVFYGTGSG 123 (626)
Q Consensus 50 IwIgS-dggL~a~d~-~G~~--~W~~~~~~~~~i~~sp~iD~dG~IwVg-T-~ggL~~id~~~~~~~~~~~~~~~~~~~~ 123 (626)
|..|+ ++.+..++. ++.. .|...- . ...+.++....++.+.+. + ++.|...|..++.. ...+...
T Consensus 51 l~tgs~D~~v~vW~~~~~~~~~~~~l~g-h-~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~-----~~~~~~~-- 121 (321)
T 3ow8_A 51 VVTGSLDDLVKVWKWRDERLDLQWSLEG-H-QLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQ-----IKSIDAG-- 121 (321)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEECC-C-SSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEE-----EEEEECC--
T ss_pred EEEEcCCCCEEEEECCCCCeeeeeeecc-C-CCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCE-----EEEEeCC--
Confidence 44455 566666665 4432 343321 1 122334445566665554 3 78888889877631 1111111
Q ss_pred CCCCCCeeEEEEEEcCCeEEEEEcCCeEEEEeCC-CcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEE
Q 006913 124 KGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYIS 202 (626)
Q Consensus 124 ~~~~~~~I~s~~~d~dG~LwIgT~~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIG 202 (626)
...+........+..|..++.++.+..++.. ++..+.... . ... ..++...+.+..|..|
T Consensus 122 ---~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~-------~--------~~~-v~~~~~spdg~~lasg 182 (321)
T 3ow8_A 122 ---PVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDT-------R--------GKF-ILSIAYSPDGKYLASG 182 (321)
T ss_dssp ---TTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEEC-------S--------SSC-EEEEEECTTSSEEEEE
T ss_pred ---CccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecC-------C--------Cce-EEEEEECCCCCEEEEE
Confidence 1111122222233456667777888888864 766554310 0 011 2334454424457778
Q ss_pred cCCCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCCeEEEEEcCCCEEEEEECCCCcEEEEEecCCCCCceeeEEEeeC
Q 006913 203 NTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPVVDSN 282 (626)
Q Consensus 203 T~~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~~~sspvvD~d 282 (626)
+.++.|..+|.++++....... ....+.++....+|.+.+....++.+..+|..++......... ...+.++...++
T Consensus 183 ~~dg~i~iwd~~~~~~~~~~~~-h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h--~~~v~~~~~sp~ 259 (321)
T 3ow8_A 183 AIDGIINIFDIATGKLLHTLEG-HAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGH--ASWVLNVAFCPD 259 (321)
T ss_dssp ETTSCEEEEETTTTEEEEEECC-CSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCC--SSCEEEEEECTT
T ss_pred cCCCeEEEEECCCCcEEEEEcc-cCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCC--CCceEEEEECCC
Confidence 8888899999999876554321 1223556666777765554445577888898888766443221 123455666666
Q ss_pred C-eEEEEEcCCeEEEEcCC-CCEEEEeeccCCCCccccCceEEEEEEecCCcEEEEEeeecCee
Q 006913 283 G-WISVGSLDGLLYSFSPS-GVLNKFSKSDTSDSVIQSSPYWFHLLGPSIGLKAILCLMVVGQF 344 (626)
Q Consensus 283 G-~IWVGT~~gGLy~~d~~-g~~~~~~~~~~~~~~ilssp~V~~Il~DsdG~IwI~T~t~~Ggl 344 (626)
| .|..|+.++.|..+|.. ++...... .....|.++....+|... .++...|.+
T Consensus 260 ~~~l~s~s~D~~v~iwd~~~~~~~~~~~--------~h~~~v~~v~~s~~g~~l-~s~~~d~~i 314 (321)
T 3ow8_A 260 DTHFVSSSSDKSVKVWDVGTRTCVHTFF--------DHQDQVWGVKYNGNGSKI-VSVGDDQEI 314 (321)
T ss_dssp SSEEEEEETTSCEEEEETTTTEEEEEEC--------CCSSCEEEEEECTTSSEE-EEEETTCCE
T ss_pred CCEEEEEeCCCcEEEEeCCCCEEEEEEc--------CCCCcEEEEEECCCCCEE-EEEeCCCeE
Confidence 5 56677888889999875 44333222 012235556556666653 333333333
No 105
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.71 E-value=0.023 Score=59.40 Aligned_cols=194 Identities=10% Similarity=-0.002 Sum_probs=114.4
Q ss_pred eeeEEe-eCCEEEEEe--CCcEEEEcCCCCEEEEEeCCCCCCcccCeEEec-CCeEEEEE--CCeEEEEECCCCccccce
Q 006913 40 SKPLIG-EDGKIYACS--EKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGG-TGEVYIVA--ENRVLKVDLLKIGTSESA 113 (626)
Q Consensus 40 Sspvid-~dG~IwIgS--dggL~a~d~~G~~~W~~~~~~~~~i~~sp~iD~-dG~IwVgT--~ggL~~id~~~~~~~~~~ 113 (626)
..+..| .++.||+.. .+.|++++.+|...-...... ......+.+|. .|+||+.. .+.|.+++.++..
T Consensus 76 ~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~-~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~----- 149 (349)
T 3v64_C 76 IALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTG-LESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH----- 149 (349)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSS-CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS-----
T ss_pred EEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCC-CCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCc-----
Confidence 344555 468888875 467888887553211111111 01223567784 78899886 5789999987642
Q ss_pred eEEEecCCCCCCCCCCeeEEEEEE-cCCeEEEEEcC--CeEEEEeCCCcEEEEECCcccccccccccccCCCCCccccce
Q 006913 114 TQVFYGTGSGKGGTGAIAGIAVST-SSSSVYINVKG--RALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVP 190 (626)
Q Consensus 114 ~~~~~~~~~~~~~~~~~I~s~~~d-~dG~LwIgT~~--gGL~a~d~~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~ssp 190 (626)
........ .... ..+..+ .+|.||+.... +.|++++.+|....... . ..+ .....+
T Consensus 150 ~~~l~~~~-----l~~P-~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~--------~----~~~---~~PnGl 208 (349)
T 3v64_C 150 RKVLLWQS-----LEKP-RAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIA--------D----THL---FWPNGL 208 (349)
T ss_dssp CEEEECTT-----CSCE-EEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESC--------C----SSC---SCEEEE
T ss_pred eEEEEeCC-----CCCc-ceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEE--------E----CCC---CCcceE
Confidence 12222110 1112 334455 57899998654 56889998875432210 0 000 112346
Q ss_pred EEEcCCCeEEEEcC-CCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCCeEEEEEcCCCEEEEEECCCCcEE
Q 006913 191 VIDQCEGSIYISNT-QGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNIL 262 (626)
Q Consensus 191 viD~~dG~LwIGT~-~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~tG~~~ 262 (626)
++|..++.||++.. .+.|.+++.++......... .......++++ ++.||++....+.+..+++.+|+..
T Consensus 209 a~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~-~~~~P~giav~-~~~ly~td~~~~~V~~~~~~~G~~~ 279 (349)
T 3v64_C 209 TIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQ-GLPHPFAITVF-EDSLYWTDWHTKSINSANKFTGKNQ 279 (349)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS-SCSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSC
T ss_pred EEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeC-CCCCceEEEEE-CCEEEEecCCCCeEEEEEccCCCcc
Confidence 77743889999865 56799999887543332221 12344566675 6899999877788999987777543
No 106
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.67 E-value=0.068 Score=56.47 Aligned_cols=217 Identities=11% Similarity=-0.047 Sum_probs=128.5
Q ss_pred CCEEEEEe-CCcEEEEcC-CCCEEEEEeCCCCCCcccCeEEecCCeEEEEE-CCeEEEEECCCCccccceeEEEecCCCC
Q 006913 47 DGKIYACS-EKTLFAFES-NGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVA-ENRVLKVDLLKIGTSESATQVFYGTGSG 123 (626)
Q Consensus 47 dG~IwIgS-dggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~dG~IwVgT-~ggL~~id~~~~~~~~~~~~~~~~~~~~ 123 (626)
+..|..|+ ++.+..+|. +++..+.+.... ..+.++.. ....|..|+ ++.|..+|..++.. ...+..
T Consensus 143 ~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~--~~v~~l~~-~~~~l~sg~~dg~i~vwd~~~~~~-----~~~~~~--- 211 (435)
T 1p22_A 143 DQKIVSGLRDNTIKIWDKNTLECKRILTGHT--GSVLCLQY-DERVIITGSSDSTVRVWDVNTGEM-----LNTLIH--- 211 (435)
T ss_dssp SSEEEEEESSSCEEEEESSSCCEEEEECCCS--SCEEEEEC-CSSEEEEEETTSCEEEEESSSCCE-----EEEECC---
T ss_pred CCEEEEEeCCCeEEEEeCCCCeEEEEEcCCC--CcEEEEEE-CCCEEEEEcCCCeEEEEECCCCcE-----EEEEcC---
Confidence 33455566 677999997 777766543221 12333333 233455566 78899999887631 222211
Q ss_pred CCCCCCeeEEEEEEcCCeEEEEEcCCeEEEEeCC-CcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEE
Q 006913 124 KGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYIS 202 (626)
Q Consensus 124 ~~~~~~~I~s~~~d~dG~LwIgT~~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIG 202 (626)
... .+..+. -.++.+..++.++.|..+|.. +...... . .+ . .+ ...+ .++..+ ++.|..|
T Consensus 212 --h~~-~v~~l~-~~~~~l~s~s~dg~i~vwd~~~~~~~~~~-~---~~--~---~~---~~~v-~~~~~~--~~~l~s~ 272 (435)
T 1p22_A 212 --HCE-AVLHLR-FNNGMMVTCSKDRSIAVWDMASPTDITLR-R---VL--V---GH---RAAV-NVVDFD--DKYIVSA 272 (435)
T ss_dssp --CCS-CEEEEE-CCTTEEEEEETTSCEEEEECSSSSCCEEE-E---EE--C---CC---SSCE-EEEEEE--TTEEEEE
T ss_pred --CCC-cEEEEE-EcCCEEEEeeCCCcEEEEeCCCCCCceee-e---Ee--c---CC---CCcE-EEEEeC--CCEEEEE
Confidence 112 233222 246688888888889999964 4432110 0 00 0 00 0111 233445 6788999
Q ss_pred cCCCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCCeEEEEEcCCCEEEEEECCCCcEEEEEecCCCCCceeeEEEeeC
Q 006913 203 NTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPVVDSN 282 (626)
Q Consensus 203 T~~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~~~sspvvD~d 282 (626)
+.++.|..+|.++++........ ...+.++..+ +..+..|+. ++.+..+|..+++........ ...+.++..+ +
T Consensus 273 ~~dg~i~vwd~~~~~~~~~~~~~-~~~v~~~~~~-~~~l~~g~~-dg~i~iwd~~~~~~~~~~~~h--~~~v~~~~~~-~ 346 (435)
T 1p22_A 273 SGDRTIKVWNTSTCEFVRTLNGH-KRGIACLQYR-DRLVVSGSS-DNTIRLWDIECGACLRVLEGH--EELVRCIRFD-N 346 (435)
T ss_dssp ETTSEEEEEETTTCCEEEEEECC-SSCEEEEEEE-TTEEEEEET-TSCEEEEETTTCCEEEEECCC--SSCEEEEECC-S
T ss_pred eCCCeEEEEECCcCcEEEEEcCC-CCcEEEEEeC-CCEEEEEeC-CCeEEEEECCCCCEEEEEeCC--cCcEEEEEec-C
Confidence 99999999999998776543321 2234555554 456777774 578888999999887655432 1234445554 6
Q ss_pred CeEEEEEcCCeEEEEcC
Q 006913 283 GWISVGSLDGLLYSFSP 299 (626)
Q Consensus 283 G~IWVGT~~gGLy~~d~ 299 (626)
..|..|+.++.|..+|.
T Consensus 347 ~~l~sg~~dg~i~vwd~ 363 (435)
T 1p22_A 347 KRIVSGAYDGKIKVWDL 363 (435)
T ss_dssp SEEEEEETTSCEEEEEH
T ss_pred CEEEEEeCCCcEEEEEC
Confidence 68888999999999984
No 107
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=97.67 E-value=0.06 Score=54.09 Aligned_cols=229 Identities=10% Similarity=0.032 Sum_probs=122.6
Q ss_pred eeeeeEEeeCCEE-EEEe-CCcEEEEcC-CCCEEEEEeCCCCCCcccCeEEecCCeEEE-EE-CCeEEEEECCCCccccc
Q 006913 38 RLSKPLIGEDGKI-YACS-EKTLFAFES-NGTIAWSLDLDFTCNIGTAPVHGGTGEVYI-VA-ENRVLKVDLLKIGTSES 112 (626)
Q Consensus 38 ~~Sspvid~dG~I-wIgS-dggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~dG~IwV-gT-~ggL~~id~~~~~~~~~ 112 (626)
.........+|.+ ..|+ ++.+..+|. +++....+.... ..+.++....+++..+ ++ ++.|..+|..++..
T Consensus 34 ~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~--~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~--- 108 (369)
T 3zwl_B 34 PLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHT--GTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQC--- 108 (369)
T ss_dssp CEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCS--SCEEEEEECTTSSEEEEEETTTEEEEEETTTCCE---
T ss_pred eEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcC--CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcE---
Confidence 3444555556654 4455 667889987 777665443221 2344556666776554 44 67899999877632
Q ss_pred eeEEEecCCCCCCCCCCeeEEEEEEcCC-eEEEEEcC-----CeEEEEeCC-CcE---EEEECC-cccccccccccccCC
Q 006913 113 ATQVFYGTGSGKGGTGAIAGIAVSTSSS-SVYINVKG-----RALFAFMTH-GQL---LWSAGP-VLDQLGYRQGCTKTD 181 (626)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~I~s~~~d~dG-~LwIgT~~-----gGL~a~d~~-G~~---~w~~~~-~~~~~~~~~~~~~~l 181 (626)
...+.. ...+..+....++ .+.++..+ +.|..++.. +.. ...... ....+. ...
T Consensus 109 --~~~~~~-------~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~-----~~~- 173 (369)
T 3zwl_B 109 --VATWKS-------PVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKII-----THE- 173 (369)
T ss_dssp --EEEEEC-------SSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEE-----CCT-
T ss_pred --EEEeec-------CCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeecc-----CCc-
Confidence 222211 1223344444444 45555555 677777742 211 111100 000000 000
Q ss_pred CCCccccceEEEcCCCeEEEEcCCCeEEEEeCCC-CeEEEEEcCCCCCcceeeeeecCCe-EEEEEcCCCEEEEEECCCC
Q 006913 182 VDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHS-PYFNWIQDLSSFDKAFTLTPGNNGY-LYVTIPVRALVLALDTSSG 259 (626)
Q Consensus 182 ~~~~i~sspviD~~dG~LwIGT~~GgL~~ld~~t-g~~~w~~~~~s~~~v~sI~~D~dG~-LwVGT~~gG~l~alD~~tG 259 (626)
.......+...+.+..|++++.+|.|..+|.++ +........ ....+.++....+|. |++++ .++.+..+|..++
T Consensus 174 -~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-~d~~i~v~d~~~~ 250 (369)
T 3zwl_B 174 -GLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDL-HEKSISDMQFSPDLTYFITSS-RDTNSFLVDVSTL 250 (369)
T ss_dssp -TCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEEC-CSSCEEEEEECTTSSEEEEEE-TTSEEEEEETTTC
T ss_pred -CccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEec-CCCceeEEEECCCCCEEEEec-CCceEEEEECCCC
Confidence 000112334443245677888889999999988 454443321 123456666666775 55555 4678889999999
Q ss_pred cEEEEEecCCCCCceeeEEEeeCC-eEEEEEcCC
Q 006913 260 NILWHKSVGPLGSAEYAPVVDSNG-WISVGSLDG 292 (626)
Q Consensus 260 ~~~w~~~~~~l~~~~sspvvD~dG-~IWVGT~~g 292 (626)
+........ .....+...+++ .+++|+.++
T Consensus 251 ~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~ 281 (369)
T 3zwl_B 251 QVLKKYETD---CPLNTAVITPLKEFIILGGGQE 281 (369)
T ss_dssp CEEEEEECS---SCEEEEEECSSSSEEEEEECCC
T ss_pred ceeeeecCC---CCceeEEecCCCceEEEeecCC
Confidence 887765533 123445555554 566666555
No 108
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.67 E-value=0.085 Score=55.69 Aligned_cols=230 Identities=9% Similarity=-0.041 Sum_probs=139.7
Q ss_pred eeeeeEEeeCCEEEEEe-CCcEEEEcC-CCCEEEEEeCCCCCCcccCeEEecCCeEEEEE-CCeEEEEECCCCcccccee
Q 006913 38 RLSKPLIGEDGKIYACS-EKTLFAFES-NGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVA-ENRVLKVDLLKIGTSESAT 114 (626)
Q Consensus 38 ~~Sspvid~dG~IwIgS-dggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~dG~IwVgT-~ggL~~id~~~~~~~~~~~ 114 (626)
+.+.... .++.|..|+ ++.+..+|. +++....+.... ..+.++..+ ++.++.++ ++.|..+|..++..
T Consensus 121 v~~~~~~-~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~--~~v~~~~~~-~~~l~s~~~dg~i~vwd~~~~~~----- 191 (445)
T 2ovr_B 121 VITCLQF-CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHT--GGVWSSQMR-DNIIISGSTDRTLKVWNAETGEC----- 191 (445)
T ss_dssp CEEEEEE-ETTEEEEEETTSCEEEEETTTCCEEEECCCCS--SCEEEEEEE-TTEEEEEETTSCEEEEETTTTEE-----
T ss_pred cEEEEEE-cCCEEEEEECCCcEEEEECCCCcEEEEEcCCC--CCEEEEEec-CCEEEEEeCCCeEEEEECCcCcE-----
Confidence 3343333 345566666 677899997 787765443211 223344443 34566666 78899999887631
Q ss_pred EEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEcCCeEEEEeCC-CcEEEEECCcccccccccccccCCCCCccccceEEE
Q 006913 115 QVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVID 193 (626)
Q Consensus 115 ~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD 193 (626)
...+. .. ...+..+.. .++.+..++.++.|..+|.. ++....... + ...+ .++..+
T Consensus 192 ~~~~~-----~h-~~~v~~~~~-~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~------------~---~~~v-~~~~~~ 248 (445)
T 2ovr_B 192 IHTLY-----GH-TSTVRCMHL-HEKRVVSGSRDATLRVWDIETGQCLHVLMG------------H---VAAV-RCVQYD 248 (445)
T ss_dssp EEEEC-----CC-SSCEEEEEE-ETTEEEEEETTSEEEEEESSSCCEEEEEEC------------C---SSCE-EEEEEC
T ss_pred EEEEC-----CC-CCcEEEEEe-cCCEEEEEeCCCEEEEEECCCCcEEEEEcC------------C---cccE-EEEEEC
Confidence 22221 11 123333333 46678888888889999975 776655310 0 0111 223344
Q ss_pred cCCCeEEEEcCCCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCCeEEEEEcCCCEEEEEECCCCcEEEEEecCCCCCc
Q 006913 194 QCEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSA 273 (626)
Q Consensus 194 ~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~~ 273 (626)
++.|..|+.++.|..+|.++++....... ....+.++..+ ...+.+|+. ++.+..+|..+++........ ...
T Consensus 249 --~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~~~v~~~~~~-~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~--~~~ 321 (445)
T 2ovr_B 249 --GRRVVSGAYDFMVKVWDPETETCLHTLQG-HTNRVYSLQFD-GIHVVSGSL-DTSIRVWDVETGNCIHTLTGH--QSL 321 (445)
T ss_dssp --SSCEEEEETTSCEEEEEGGGTEEEEEECC-CSSCEEEEEEC-SSEEEEEET-TSCEEEEETTTCCEEEEECCC--CSC
T ss_pred --CCEEEEEcCCCEEEEEECCCCcEeEEecC-CCCceEEEEEC-CCEEEEEeC-CCeEEEEECCCCCEEEEEcCC--ccc
Confidence 67788898899999999998877655432 12235555552 446777764 578888999899887655332 122
Q ss_pred eeeEEEeeCCeEEEEEcCCeEEEEcCC-CCEEEEe
Q 006913 274 EYAPVVDSNGWISVGSLDGLLYSFSPS-GVLNKFS 307 (626)
Q Consensus 274 ~sspvvD~dG~IWVGT~~gGLy~~d~~-g~~~~~~ 307 (626)
...+..+ ++.+..|+.++.|..+|.. ++.....
T Consensus 322 v~~~~~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~ 355 (445)
T 2ovr_B 322 TSGMELK-DNILVSGNADSTVKIWDIKTGQCLQTL 355 (445)
T ss_dssp EEEEEEE-TTEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred EEEEEEe-CCEEEEEeCCCeEEEEECCCCcEEEEE
Confidence 3444455 6788889999999999974 6655433
No 109
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.64 E-value=0.023 Score=56.76 Aligned_cols=178 Identities=12% Similarity=0.021 Sum_probs=110.2
Q ss_pred cCCeEEEEEcCC---eEEEEeCC-CcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcC-CCeEEEEe
Q 006913 138 SSSSVYINVKGR---ALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNT-QGELYSLS 212 (626)
Q Consensus 138 ~dG~LwIgT~~g---GL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~-~GgL~~ld 212 (626)
.++.||+++-.. .|..+|+. |+.+-.. .++ ...+.-.+..+ +++||+.++ ++-++.+|
T Consensus 29 ~~~~LyestG~~g~S~v~~vD~~tgkv~~~~-----~l~----------~~~fgeGi~~~--~~~ly~ltw~~~~v~v~D 91 (243)
T 3mbr_X 29 LRGHLYESTGETGRSSVRKVDLETGRILQRA-----EVP----------PPYFGAGIVAW--RDRLIQLTWRNHEGFVYD 91 (243)
T ss_dssp ETTEEEEEECCTTSCEEEEEETTTCCEEEEE-----ECC----------TTCCEEEEEEE--TTEEEEEESSSSEEEEEE
T ss_pred ECCEEEEECCCCCCceEEEEECCCCCEEEEE-----eCC----------CCcceeEEEEe--CCEEEEEEeeCCEEEEEE
Confidence 358999998653 69999985 8876543 111 01111223455 789999987 56789999
Q ss_pred CCCCeEEEEEcCCCCCcceeeeeecCCeEEEEEcCCCEEEEEECCCCcEEEEEecCCCC---CceeeEEEeeCCeEEEEE
Q 006913 213 AHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLG---SAEYAPVVDSNGWISVGS 289 (626)
Q Consensus 213 ~~tg~~~w~~~~~s~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~---~~~sspvvD~dG~IWVGT 289 (626)
+++.+..-..+.+.. -..++.| .++||+.. +...++.+|+.+.++.-.......+ .....+... +|.||+..
T Consensus 92 ~~tl~~~~ti~~~~~--Gwglt~d-g~~L~vSd-gs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanv 166 (243)
T 3mbr_X 92 LATLTPRARFRYPGE--GWALTSD-DSHLYMSD-GTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANV 166 (243)
T ss_dssp TTTTEEEEEEECSSC--CCEEEEC-SSCEEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEE
T ss_pred CCcCcEEEEEeCCCC--ceEEeeC-CCEEEEEC-CCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEE
Confidence 999887765544331 1344444 56899976 5678999999999887655443101 112222233 89999998
Q ss_pred c-CCeEEEEcCC-CCEEEEeecc---CCCCc--cccCceEEEEEEec-CCcEEEEEe
Q 006913 290 L-DGLLYSFSPS-GVLNKFSKSD---TSDSV--IQSSPYWFHLLGPS-IGLKAILCL 338 (626)
Q Consensus 290 ~-~gGLy~~d~~-g~~~~~~~~~---~~~~~--ilssp~V~~Il~Ds-dG~IwI~T~ 338 (626)
. .+.|.++|+. |++....... +.... .......+.|..|. .+++| -|+
T Consensus 167 w~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lf-VTG 222 (243)
T 3mbr_X 167 WLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLF-VTG 222 (243)
T ss_dssp TTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEE-EEE
T ss_pred CCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEE-EEC
Confidence 4 6799999985 8866544321 11000 01233556788776 46666 344
No 110
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.63 E-value=0.055 Score=57.23 Aligned_cols=221 Identities=9% Similarity=-0.024 Sum_probs=126.0
Q ss_pred cCCeEEEEECCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEc-CCeEEEEeCCCcEEEE-E
Q 006913 87 GTGEVYIVAENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVK-GRALFAFMTHGQLLWS-A 164 (626)
Q Consensus 87 ~dG~IwVgT~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~-~gGL~a~d~~G~~~w~-~ 164 (626)
..+.|+++..+.|..+++.+... ...... .....+......++.||+... .+.|+.++++|...-. .
T Consensus 86 ~~~~l~~~~~~~I~~i~~~~~~~-----~~~~~~------~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~ 154 (386)
T 3v65_B 86 PEPVLLFANRIDIRQVLPHRSEY-----TLLLNN------LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVV 154 (386)
T ss_dssp SCCEEEEECBSCEEEECTTSCCC-----EEEECS------CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEE
T ss_pred ccceeEeecCccceeeccCCCcE-----EEEecC------CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEE
Confidence 34556666677899998876531 222111 112333333336788998764 4678899987543211 1
Q ss_pred CCcccccccccccccCCCCCccccceEEEcCCCeEEEEcC-CCeEEEEeCCCCeEEEEEcCCCCCcceeeeee-cCCeEE
Q 006913 165 GPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNT-QGELYSLSAHSPYFNWIQDLSSFDKAFTLTPG-NNGYLY 242 (626)
Q Consensus 165 ~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~-~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D-~dG~Lw 242 (626)
.. + +. ....+++|..+++||+... .+.|.+++.++........ ........+++| .+|.||
T Consensus 155 ~~-----~--------~~---~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~-~~l~~P~giavdp~~g~ly 217 (386)
T 3v65_B 155 ST-----G--------LE---SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLW-QSLEKPRAIALHPMEGTIY 217 (386)
T ss_dssp CS-----S--------CS---CCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEEC-SSCSCEEEEEEETTTTEEE
T ss_pred eC-----C--------CC---CccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeec-CCCCCCcEEEEEcCCCeEE
Confidence 00 0 00 0133677743788988765 5678898888754333222 122345678888 478999
Q ss_pred EEEcCC-CEEEEEECCCCcEEEEEecCCCCCceeeEEEe-eCCeEEEEEc-CCeEEEEcCCCCEEE-EeeccCCCCcccc
Q 006913 243 VTIPVR-ALVLALDTSSGNILWHKSVGPLGSAEYAPVVD-SNGWISVGSL-DGLLYSFSPSGVLNK-FSKSDTSDSVIQS 318 (626)
Q Consensus 243 VGT~~g-G~l~alD~~tG~~~w~~~~~~l~~~~sspvvD-~dG~IWVGT~-~gGLy~~d~~g~~~~-~~~~~~~~~~ils 318 (626)
+..... +.++.++.. |..........+ .....+++| .+++||+... .+.|++++.+|.... ... .. +.
T Consensus 218 ~td~~~~~~I~r~~~d-G~~~~~~~~~~~-~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~----~~--~~ 289 (386)
T 3v65_B 218 WTDWGNTPRIEASSMD-GSGRRIIADTHL-FWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVIS----QG--LP 289 (386)
T ss_dssp EEECSSSCEEEEEETT-SCSCEEEECSSC-SCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEEC----SS--CS
T ss_pred EeccCCCCEEEEEeCC-CCCcEEEEECCC-CCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEE----CC--CC
Confidence 987655 688888854 433222211111 124567887 5789999864 457999998764322 222 11 22
Q ss_pred CceEEEEEEecCCcEEEEEeeecCeeEEe
Q 006913 319 SPYWFHLLGPSIGLKAILCLMVVGQFSSL 347 (626)
Q Consensus 319 sp~V~~Il~DsdG~IwI~T~t~~Ggl~~~ 347 (626)
.| ..|..+ ++.|| |+....+.+...
T Consensus 290 ~P--~giav~-~~~ly-~td~~~~~V~~~ 314 (386)
T 3v65_B 290 HP--FAITVF-EDSLY-WTDWHTKSINSA 314 (386)
T ss_dssp SE--EEEEEE-TTEEE-EEETTTTEEEEE
T ss_pred Cc--eEEEEE-CCEEE-EeeCCCCeEEEE
Confidence 33 345554 57888 776555666554
No 111
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=97.62 E-value=0.098 Score=55.11 Aligned_cols=261 Identities=9% Similarity=-0.021 Sum_probs=139.7
Q ss_pred eEEeeCCEEEE-Ee-CCcEEEEcC-CCCEEEEEeCCCCCCcccCeEEecCCeEEEE-E-CCeEEEEECCCCccccceeEE
Q 006913 42 PLIGEDGKIYA-CS-EKTLFAFES-NGTIAWSLDLDFTCNIGTAPVHGGTGEVYIV-A-ENRVLKVDLLKIGTSESATQV 116 (626)
Q Consensus 42 pvid~dG~IwI-gS-dggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~dG~IwVg-T-~ggL~~id~~~~~~~~~~~~~ 116 (626)
.....++.+.+ |+ ++.+..+|. +++....+... ...+.++....+|.+.+. + ++.|..+|..+... ..
T Consensus 114 ~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h--~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~-----~~ 186 (410)
T 1vyh_C 114 VIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGH--TDSVQDISFDHSGKLLASCSADMTIKLWDFQGFEC-----IR 186 (410)
T ss_dssp EEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCC--SSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCE-----EE
T ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEecc--CCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce-----eE
Confidence 33435555444 44 667888887 66654333221 123445556677775554 4 67788888876421 11
Q ss_pred EecCCCCCCCCCCeeEEEEEEcC-CeEEEEEcCCeEEEEeCC-CcEEEEECCcccccccccccccCCCCCccccceEEEc
Q 006913 117 FYGTGSGKGGTGAIAGIAVSTSS-SSVYINVKGRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQ 194 (626)
Q Consensus 117 ~~~~~~~~~~~~~~I~s~~~d~d-G~LwIgT~~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~ 194 (626)
.+ .... ..|..+....+ ..|..|+.++-+..+|.. |..+..+.. +. ..+ ......+
T Consensus 187 ~~-----~~h~-~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~------------h~---~~v-~~~~~~~ 244 (410)
T 1vyh_C 187 TM-----HGHD-HNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG------------HR---EWV-RMVRPNQ 244 (410)
T ss_dssp CC-----CCCS-SCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEEC------------CS---SCE-EEEEECT
T ss_pred EE-----cCCC-CCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeC------------CC---ccE-EEEEECC
Confidence 11 1111 23444444444 457777888888889974 765543300 00 111 2233343
Q ss_pred CCCeEEEEcCCCeEEEEeCCCCeEEEEEcCCCCCcceeeeeec--------------------CC-eEEEEEcCCCEEEE
Q 006913 195 CEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGN--------------------NG-YLYVTIPVRALVLA 253 (626)
Q Consensus 195 ~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~--------------------dG-~LwVGT~~gG~l~a 253 (626)
.+..|..|+.++.|..+|..++...-.... ....+.++.... +| .|..|+ .++.+..
T Consensus 245 ~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs-~D~~i~i 322 (410)
T 1vyh_C 245 DGTLIASCSNDQTVRVWVVATKECKAELRE-HRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS-RDKTIKM 322 (410)
T ss_dssp TSSEEEEEETTSCEEEEETTTCCEEEEECC-CSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEE-TTSEEEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCceeeEecC-CCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEe-CCCeEEE
Confidence 133466677788899999888765433211 111223332222 13 455555 4578888
Q ss_pred EECCCCcEEEEEecCCCCCceeeEEEeeCC-eEEEEEcCCeEEEEcCC-CCEEEEeeccCCCCccccCceEEEEEEecCC
Q 006913 254 LDTSSGNILWHKSVGPLGSAEYAPVVDSNG-WISVGSLDGLLYSFSPS-GVLNKFSKSDTSDSVIQSSPYWFHLLGPSIG 331 (626)
Q Consensus 254 lD~~tG~~~w~~~~~~l~~~~sspvvD~dG-~IWVGT~~gGLy~~d~~-g~~~~~~~~~~~~~~ilssp~V~~Il~DsdG 331 (626)
+|..+|......... ...+.++...++| .|..|+.++.|..+|.. ++...... .....|.++....+|
T Consensus 323 wd~~~~~~~~~~~~h--~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~--------~h~~~v~~l~~~~~~ 392 (410)
T 1vyh_C 323 WDVSTGMCLMTLVGH--DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN--------AHEHFVTSLDFHKTA 392 (410)
T ss_dssp EETTTTEEEEEEECC--SSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEE--------CCSSCEEEEEECSSS
T ss_pred EECCCCceEEEEECC--CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEc--------CCCCcEEEEEEcCCC
Confidence 999888876554322 1234556666665 57778888889999864 43322221 112235566655666
Q ss_pred cEEEEEeeecCee
Q 006913 332 LKAILCLMVVGQF 344 (626)
Q Consensus 332 ~IwI~T~t~~Ggl 344 (626)
... .+++..|.+
T Consensus 393 ~~l-~sgs~D~~i 404 (410)
T 1vyh_C 393 PYV-VTGSVDQTV 404 (410)
T ss_dssp SCE-EEEETTSEE
T ss_pred CEE-EEEeCCCcE
Confidence 543 454444444
No 112
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.62 E-value=0.019 Score=61.85 Aligned_cols=232 Identities=9% Similarity=-0.008 Sum_probs=128.2
Q ss_pred eeeeEEe--eCCEEEEEeC-CcEEEEcCCCCEEEEEeCCCCCCcccCeEEecCCe-EEEEEC--C----eEEEEECCCCc
Q 006913 39 LSKPLIG--EDGKIYACSE-KTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGE-VYIVAE--N----RVLKVDLLKIG 108 (626)
Q Consensus 39 ~Sspvid--~dG~IwIgSd-ggL~a~d~~G~~~W~~~~~~~~~i~~sp~iD~dG~-IwVgT~--g----gL~~id~~~~~ 108 (626)
-+.+++| .+|.||++.. +.|.++|.++..+-.+.... .....+.+|.+|+ ||++.. + .++.+++.+..
T Consensus 139 P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~--~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~ 216 (430)
T 3tc9_A 139 AVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGL--SKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGF 216 (430)
T ss_dssp CCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCC--SCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTS
T ss_pred CCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCC--CCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCce
Confidence 3556777 5689999875 68999998554322222111 2234567788888 898862 1 46667765431
Q ss_pred cccceeEEEecCCCCCCCCCCeeEEEEEEc-CCeEEEEEcC-CeEEEEeCCCcEEEEECCcccccccccccccCCCCCcc
Q 006913 109 TSESATQVFYGTGSGKGGTGAIAGIAVSTS-SSSVYINVKG-RALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYF 186 (626)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~-dG~LwIgT~~-gGL~a~d~~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i 186 (626)
. .. . .+... ... ..+..+. +|.||++... +.|+.+++++....... ..+ . ...
T Consensus 217 ~-~~--~-~l~~~------~~p-~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~----~~~-------~---~~~ 271 (430)
T 3tc9_A 217 K-VI--T-ELTKG------QNC-NGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLF----TIQ-------D---SGW 271 (430)
T ss_dssp C-SE--E-EEEEC------SSC-CCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEE----ECS-------S---SSC
T ss_pred e-ee--e-eeccC------CCc-eEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEE----EcC-------C---CCc
Confidence 1 00 0 01000 001 1233455 8999998754 67999998744331110 000 0 001
Q ss_pred ccceEEEcCCCe-EEEEcC-CCeEEEEeCCC--CeE----EEEEcCC--C----------CCcce-eeee--------ec
Q 006913 187 TSVPVIDQCEGS-IYISNT-QGELYSLSAHS--PYF----NWIQDLS--S----------FDKAF-TLTP--------GN 237 (626)
Q Consensus 187 ~sspviD~~dG~-LwIGT~-~GgL~~ld~~t--g~~----~w~~~~~--s----------~~~v~-sI~~--------D~ 237 (626)
...+++++ +|+ ||+... ++.|++++.++ +.+ .+.-..+ + +.... .++. |.
T Consensus 272 P~gia~~p-dG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~ 350 (430)
T 3tc9_A 272 EFHIQFHP-SGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSD 350 (430)
T ss_dssp CEEEEECT-TSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSC
T ss_pred ceeEEEcC-CCCEEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCC
Confidence 13367776 666 998864 56788877653 332 1111101 0 11122 3444 45
Q ss_pred CCeEEEEEcCCCEEEEEECCCCcEEEEEecC-----C--CC--------CceeeEEEee-CCeEEEEEc-CCeEEEEcC
Q 006913 238 NGYLYVTIPVRALVLALDTSSGNILWHKSVG-----P--LG--------SAEYAPVVDS-NGWISVGSL-DGLLYSFSP 299 (626)
Q Consensus 238 dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~-----~--l~--------~~~sspvvD~-dG~IWVGT~-~gGLy~~d~ 299 (626)
+|+|||+...+..+..++ .+|.+......+ . .+ .....+++|+ +|.|||+.. +..|.++++
T Consensus 351 ~g~lyvaD~~n~~I~~i~-~~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 428 (430)
T 3tc9_A 351 EYDFYFCDRENHCIRILT-PQGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGY 428 (430)
T ss_dssp CEEEEEEEGGGTEEEEEC-TTSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred CCeEEEEECCCcEEEEEC-CCCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEcc
Confidence 689999987777898898 567665433220 0 00 1245677887 699999874 345655553
No 113
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.61 E-value=0.077 Score=53.81 Aligned_cols=235 Identities=10% Similarity=0.042 Sum_probs=116.0
Q ss_pred EEEEEe-----CCc--EEEEcC-CCCEEEEEeCCCCCCcccCeEEecCCeEEEEEC----CeEEEEECCCCccccceeEE
Q 006913 49 KIYACS-----EKT--LFAFES-NGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAE----NRVLKVDLLKIGTSESATQV 116 (626)
Q Consensus 49 ~IwIgS-----dgg--L~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~dG~IwVgT~----ggL~~id~~~~~~~~~~~~~ 116 (626)
.+|+|+ +++ ++.+|. +|++........ ......+.++.+|+||++.. +.|+.++..++... ...
T Consensus 4 ~~~vg~y~~~~~~~i~v~~~d~~tg~~~~~~~~~~-~~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~---~~~ 79 (347)
T 3hfq_A 4 RILFGTYTKKTSQGIYQGTLDTTAKTLTNDGLLAA-TQNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAH---KLN 79 (347)
T ss_dssp EEEEEECCSSSCCEEEEEEEETTTTEEEEEEEEEE-CSCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEE---EEE
T ss_pred EEEEEeccCCCCCCEEEEEEcCCCCeEEEeeeeec-cCCcceEEEccCCeEEEEEecCCCceEEEEEecCCcEE---Eee
Confidence 577775 123 556666 676542111111 01233566778899888762 67888887654210 000
Q ss_pred EecCCCCCCCCCCeeEEEEEEcCC-eEEEEEc-CCeEEEEeC--CCcEEEEECCcccccccccccccCCCCCccccceEE
Q 006913 117 FYGTGSGKGGTGAIAGIAVSTSSS-SVYINVK-GRALFAFMT--HGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVI 192 (626)
Q Consensus 117 ~~~~~~~~~~~~~~I~s~~~d~dG-~LwIgT~-~gGL~a~d~--~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspvi 192 (626)
.... . ......+....+| .||++.. ++.+..++. +|...... . +......+...........+.+
T Consensus 80 ~~~~-----~-~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~-~----~~~~~~~p~~~~~~~~~~~~~~ 148 (347)
T 3hfq_A 80 TVVA-----P-GTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTD-T----VQHSGHGPRPEQDGSHIHYTDL 148 (347)
T ss_dssp EEEE-----E-SCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEE-E----EECCCCCSSTTCSSCCEEEEEE
T ss_pred eeec-----C-CCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecc-e----eecCCCCCCccccCCCceEEEE
Confidence 1000 0 0111223345555 4888774 455777774 35543221 0 0000000000000001123556
Q ss_pred EcCCCeEEEEcC-CCeEEEEeCC-CCeEEEEEc--CCCCCcceeeeeecCCe-EEEEEcCCCEEEE--EECCCCcEEEEE
Q 006913 193 DQCEGSIYISNT-QGELYSLSAH-SPYFNWIQD--LSSFDKAFTLTPGNNGY-LYVTIPVRALVLA--LDTSSGNILWHK 265 (626)
Q Consensus 193 D~~dG~LwIGT~-~GgL~~ld~~-tg~~~w~~~--~~s~~~v~sI~~D~dG~-LwVGT~~gG~l~a--lD~~tG~~~w~~ 265 (626)
++ +|++|+... ++.|..++.+ ++++..... ......+..++.+.||+ ||++...++.+.. ++..+|+.....
T Consensus 149 sp-dg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~ 227 (347)
T 3hfq_A 149 TP-DNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLG 227 (347)
T ss_dssp CT-TSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEE
T ss_pred CC-CCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEee
Confidence 65 677888765 4568888877 555543221 11112344567778886 8887655555444 454456653221
Q ss_pred --ecCCCC----CceeeEEEeeCCe-EEEEEc-CCeEEEEcC
Q 006913 266 --SVGPLG----SAEYAPVVDSNGW-ISVGSL-DGLLYSFSP 299 (626)
Q Consensus 266 --~~~~l~----~~~sspvvD~dG~-IWVGT~-~gGLy~~d~ 299 (626)
...+.. .....+.++++|. ||+... ++.|..++.
T Consensus 228 ~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~ 269 (347)
T 3hfq_A 228 IVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAV 269 (347)
T ss_dssp EEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEE
T ss_pred eeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEE
Confidence 111100 1245577888885 778764 567777774
No 114
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=97.59 E-value=0.046 Score=56.27 Aligned_cols=239 Identities=7% Similarity=-0.087 Sum_probs=128.7
Q ss_pred eeeeEEeeCC--EEEEEe-CCcEEEEcC-CCCEEEEEeCCCCCCcccCeEEec-CCeEE-EEE-CCeEEEEECCCCcccc
Q 006913 39 LSKPLIGEDG--KIYACS-EKTLFAFES-NGTIAWSLDLDFTCNIGTAPVHGG-TGEVY-IVA-ENRVLKVDLLKIGTSE 111 (626)
Q Consensus 39 ~Sspvid~dG--~IwIgS-dggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~-dG~Iw-VgT-~ggL~~id~~~~~~~~ 111 (626)
........+| .|..|+ ++.+..+|. ++..............+.++.... ++++. .++ ++.|..+|..+..
T Consensus 76 v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~--- 152 (383)
T 3ei3_B 76 VTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSV--- 152 (383)
T ss_dssp EEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCE---
T ss_pred EEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCc---
Confidence 3344444565 455565 667888887 555443333211112344455555 44444 445 6888888987642
Q ss_pred ceeEEEecCCCCCCCCCCeeEEEEEE-cCCeEEEEEcCCeEEEEeCCCcEEEEECCcccccccccccccCCCCCccccce
Q 006913 112 SATQVFYGTGSGKGGTGAIAGIAVST-SSSSVYINVKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVP 190 (626)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~I~s~~~d-~dG~LwIgT~~gGL~a~d~~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~ssp 190 (626)
........ .. ...+..+... .+..|..++.++.|..+|.+++....+.. + ... ..++
T Consensus 153 --~~~~~~~~---~~-~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~------------h---~~~-v~~~ 210 (383)
T 3ei3_B 153 --IQVFAKTD---SW-DYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFKEKL------------H---KAK-VTHA 210 (383)
T ss_dssp --EEEEECCC---CS-SCCEEEEEEETTTTEEEEEETTSEEEEEETTSCEEEEEEC------------S---SSC-EEEE
T ss_pred --eEEEeccC---CC-CCCeEEEEECCCCCEEEEECCCCCEEEEECCCCEEEEecc------------C---CCc-EEEE
Confidence 11111111 11 1233443333 44567777888889999988776654310 0 011 2334
Q ss_pred EEEcCCC--eEEEEcCCCeEEEEeCCC----CeEEEEEcCCCCCcceeeeeec-CCeEEEEEcCCCEEEEEECCCCcEEE
Q 006913 191 VIDQCEG--SIYISNTQGELYSLSAHS----PYFNWIQDLSSFDKAFTLTPGN-NGYLYVTIPVRALVLALDTSSGNILW 263 (626)
Q Consensus 191 viD~~dG--~LwIGT~~GgL~~ld~~t----g~~~w~~~~~s~~~v~sI~~D~-dG~LwVGT~~gG~l~alD~~tG~~~w 263 (626)
...+ ++ .|..|..++.|..+|.++ +....... ....+.++.... +|.+.+....++.+..+|..+++...
T Consensus 211 ~~~~-~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 287 (383)
T 3ei3_B 211 EFNP-RCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMP--HEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPD 287 (383)
T ss_dssp EECS-SCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEE--CSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCS
T ss_pred EECC-CCCCEEEEEeCCCEEEEEeCCCCCcccceEEEec--CCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccc
Confidence 4544 44 577788888899999886 44433322 123456667666 77544433345788889987776432
Q ss_pred EEecC---------CCC------CceeeEEEeeCCeEEEEEcCCeEEEEcCC-CCEEEE
Q 006913 264 HKSVG---------PLG------SAEYAPVVDSNGWISVGSLDGLLYSFSPS-GVLNKF 306 (626)
Q Consensus 264 ~~~~~---------~l~------~~~sspvvD~dG~IWVGT~~gGLy~~d~~-g~~~~~ 306 (626)
..... ... .........++|.+ .|+.++.|..+|.. ++....
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~-s~s~d~~i~iwd~~~~~~~~~ 345 (383)
T 3ei3_B 288 QIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL-LLNDKRTIDIYDANSGGLVHQ 345 (383)
T ss_dssp EEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT-CTTCCCCEEEEETTTCCEEEE
T ss_pred ccccccccccccccceEEeccCCCCceEEEecCCccc-ccCCCCeEEEEecCCCceeee
Confidence 22100 000 00111333456666 66778889999964 665443
No 115
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.58 E-value=0.018 Score=60.27 Aligned_cols=229 Identities=14% Similarity=0.099 Sum_probs=119.3
Q ss_pred eeeeeEEeeCCEEEEEe-CCcEEEEcCCCCEEEEEeCC--C-CCCcccCeEEecC----CeEEEEE--C-----CeEEEE
Q 006913 38 RLSKPLIGEDGKIYACS-EKTLFAFESNGTIAWSLDLD--F-TCNIGTAPVHGGT----GEVYIVA--E-----NRVLKV 102 (626)
Q Consensus 38 ~~Sspvid~dG~IwIgS-dggL~a~d~~G~~~W~~~~~--~-~~~i~~sp~iD~d----G~IwVgT--~-----ggL~~i 102 (626)
.-..++++.+|+||++. .+.|++++ +|+..-..... . .......+.++.+ +.||+.. . +.|.++
T Consensus 32 ~P~~ia~~pdG~l~V~e~~g~I~~i~-~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~ 110 (352)
T 2ism_A 32 VPWALAFLPDGGMLIAERPGRIRLFR-EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRL 110 (352)
T ss_dssp CEEEEEECTTSCEEEEETTTEEEEEE-TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEE
T ss_pred CceEEEEcCCCeEEEEeCCCeEEEEE-CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEE
Confidence 34456777899999987 56789998 55432111111 0 0012234566665 7899985 2 689999
Q ss_pred ECCCCccccceeEEE-ecCCCCCCCCCCeeEEEEEEcCCeEEEEEcC--------------CeEEEEeCCCcE-------
Q 006913 103 DLLKIGTSESATQVF-YGTGSGKGGTGAIAGIAVSTSSSSVYINVKG--------------RALFAFMTHGQL------- 160 (626)
Q Consensus 103 d~~~~~~~~~~~~~~-~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~~--------------gGL~a~d~~G~~------- 160 (626)
+..+.........+. +.......+. ...+..+.+|.||+++.+ +.|++++++|++
T Consensus 111 ~~~~~~~~~~~~l~~~~p~~~~~~h~---~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~ 187 (352)
T 2ism_A 111 RHLGERGVLDRVVLDGIPARPHGLHS---GGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFL 187 (352)
T ss_dssp EECSSCEEEEEEEEEEECCCTTCCCC---CCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTT
T ss_pred EeCCCCcCceEEEEEeCCCCCCCCcC---CceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCccc
Confidence 876532111111111 2210111111 123456789999998532 468888887632
Q ss_pred --------EEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcCCC-e--------EEEEeCCCCeEEEEEc
Q 006913 161 --------LWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQG-E--------LYSLSAHSPYFNWIQD 223 (626)
Q Consensus 161 --------~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~~G-g--------L~~ld~~tg~~~w~~~ 223 (626)
+|.. +.+ + ...+.+|+.+|.||++.... . |..+.. ++.+-|-..
T Consensus 188 ~~~~~~~~i~a~-------G~r----------n-p~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~-G~nyGwp~~ 248 (352)
T 2ism_A 188 GRRGARPEVYSL-------GHR----------N-PQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVP-GGNYGWPRV 248 (352)
T ss_dssp TCTTSCTTEEEE-------CCS----------E-ECCCEECTTTCCEEEEEECC------CCCEEEEECT-TCBCCTTTC
T ss_pred CCCCCCccEEEE-------cCC----------C-cccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEecc-CCcCCCCcc
Confidence 1211 000 0 12345664368899987532 2 555533 322222100
Q ss_pred C---------------CCCCcceeeeeecCCeEEEEEcCCCEEEEEECCCCcEEE-----EEecCCCCCceeeEEEeeCC
Q 006913 224 L---------------SSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILW-----HKSVGPLGSAEYAPVVDSNG 283 (626)
Q Consensus 224 ~---------------~s~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~tG~~~w-----~~~~~~l~~~~sspvvD~dG 283 (626)
. ........++. .+|.+|++...++.+..++...+...+ ..-..... ....+.++++|
T Consensus 249 ~g~~~~~~~~~p~~~~~~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~-rp~~v~~~pdG 326 (352)
T 2ism_A 249 VGRGNDPRYRDPLYFWPQGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFG-RLREVQVGPDG 326 (352)
T ss_dssp CSCCCCTTSCCCSEECTTCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSC-CEEEEEECTTS
T ss_pred cCCCCCCCCcCCeEecCCCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCC-CeeEEEECCCC
Confidence 0 00001123333 478999998877788877654332111 10011111 24557788899
Q ss_pred eEEEEEcC
Q 006913 284 WISVGSLD 291 (626)
Q Consensus 284 ~IWVGT~~ 291 (626)
.|||.+.+
T Consensus 327 ~lyv~~~~ 334 (352)
T 2ism_A 327 ALYVTTSN 334 (352)
T ss_dssp CEEEEECS
T ss_pred cEEEEEeC
Confidence 99999853
No 116
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.55 E-value=0.022 Score=58.85 Aligned_cols=186 Identities=17% Similarity=0.061 Sum_probs=109.7
Q ss_pred CCEEEEEe--CCcEEEEcCCCCE--EEEEeCCCCCCcccCeEEec-CCeEEEEE--CCeEEEEECCCCccccceeEEEec
Q 006913 47 DGKIYACS--EKTLFAFESNGTI--AWSLDLDFTCNIGTAPVHGG-TGEVYIVA--ENRVLKVDLLKIGTSESATQVFYG 119 (626)
Q Consensus 47 dG~IwIgS--dggL~a~d~~G~~--~W~~~~~~~~~i~~sp~iD~-dG~IwVgT--~ggL~~id~~~~~~~~~~~~~~~~ 119 (626)
++.||+.. .+.|++++.+|.. .+...... .....+.+|. .|+||+.. .+.|.++++++.. ......
T Consensus 46 ~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l--~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~-----~~~l~~ 118 (318)
T 3sov_A 46 HGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGL--LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL-----RKVLFW 118 (318)
T ss_dssp GTEEEEEETTTTEEEEEETTSSSCCCEEEEECC--SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS-----CEEEEC
T ss_pred CCEEEEEECCCCcEEEEEccCCCceEEEEcCCC--CCccEEEEEcCCCeEEEEECCCCEEEEEECCCCc-----EEEEEe
Confidence 57888875 4568888874431 11121111 1223567784 78899985 5789999987642 122221
Q ss_pred CCCCCCCCCCeeEEEEEE-cCCeEEEEEc--CCeEEEEeCCCcEEEEECCcccccccccccccCCCCCccccceEEEcCC
Q 006913 120 TGSGKGGTGAIAGIAVST-SSSSVYINVK--GRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCE 196 (626)
Q Consensus 120 ~~~~~~~~~~~I~s~~~d-~dG~LwIgT~--~gGL~a~d~~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~d 196 (626)
.. .... ..+..+ .+|.||+... .+.|++++++|........ ..+ .....+++|..+
T Consensus 119 ~~-----~~~P-~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~------------~~l---~~Pnglavd~~~ 177 (318)
T 3sov_A 119 QE-----LDQP-RAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIIN------------SEI---YWPNGLTLDYEE 177 (318)
T ss_dssp SS-----CSSE-EEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEEC------------SSC---SCEEEEEEETTT
T ss_pred CC-----CCCc-cEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEE------------CCC---CCccEEEEeccC
Confidence 10 1122 334445 5789999874 4679999988654322100 000 012346777447
Q ss_pred CeEEEEcC-CCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCCeEEEEEcCCCEEEEEECCCCcEE
Q 006913 197 GSIYISNT-QGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNIL 262 (626)
Q Consensus 197 G~LwIGT~-~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~tG~~~ 262 (626)
++||++.. .+.|+++|.++....-... ........++++ ++.+|+....++.+..+++.+|+..
T Consensus 178 ~~lY~aD~~~~~I~~~d~dG~~~~~~~~-~~~~~P~glav~-~~~lywtd~~~~~V~~~~~~~G~~~ 242 (318)
T 3sov_A 178 QKLYWADAKLNFIHKSNLDGTNRQAVVK-GSLPHPFALTLF-EDILYWTDWSTHSILACNKYTGEGL 242 (318)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEEC-SCCSCEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSC
T ss_pred CEEEEEECCCCEEEEEcCCCCceEEEec-CCCCCceEEEEe-CCEEEEEecCCCeEEEEECCCCCce
Confidence 88998865 5679999988754432222 122345567777 4577777767789999998777643
No 117
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.55 E-value=0.065 Score=53.89 Aligned_cols=206 Identities=10% Similarity=0.066 Sum_probs=118.7
Q ss_pred ceeeeeEEee-CCEEEEEe--CCcEEEEcCCCCEEEEEeCCCCCCcccCeEEecCCeEEEEE--CCeEEEEECCCCcccc
Q 006913 37 FRLSKPLIGE-DGKIYACS--EKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVA--ENRVLKVDLLKIGTSE 111 (626)
Q Consensus 37 ~~~Sspvid~-dG~IwIgS--dggL~a~d~~G~~~W~~~~~~~~~i~~sp~iD~dG~IwVgT--~ggL~~id~~~~~~~~ 111 (626)
.-.|..+.+. .++||+.+ ++.|+.+|.+|++....++... .-...+.++.+|.+||.. ++.++.++.......+
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i~l~g~-~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~ 105 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIPLDFV-KDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVK 105 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETTEEEEEEETTCCEEEEEECSSC-SSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEE
T ss_pred cCcceeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEEecCCC-CChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeee
Confidence 3588888875 57899977 4579999999988776665421 123355667888888887 5688888654432111
Q ss_pred ceeEEEecCCCCCCCCCCeeEEEEEE-cCCeEEEEEcC--CeEEEEeC--CCc-EEEEECCcccccccccccccCCCCCc
Q 006913 112 SATQVFYGTGSGKGGTGAIAGIAVST-SSSSVYINVKG--RALFAFMT--HGQ-LLWSAGPVLDQLGYRQGCTKTDVDCY 185 (626)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~I~s~~~d-~dG~LwIgT~~--gGL~a~d~--~G~-~~w~~~~~~~~~~~~~~~~~~l~~~~ 185 (626)
......+.... ...+.-...+..+ .+++||++... .+|+.++. .+. +.-...+ .+. ....-..
T Consensus 106 ~~~~~~~~~~~--~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~---~~~------~~~~~~d 174 (255)
T 3qqz_A 106 ILKKIKIPLQE--SPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDK---ALQ------RQFTLDD 174 (255)
T ss_dssp EEEEEECCCSS--CCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECH---HHH------HTCCSSC
T ss_pred eeeeecccccc--ccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecch---hhc------cccccCC
Confidence 00111111100 1111123344445 45689998764 36777771 221 1101000 000 0000011
Q ss_pred cccceEEEcCCCeEEEEcC-CCeEEEEeCCCCeEEEEEcCC-C-------CCcceeeeeecCCeEEEEEcCCCEEEEEEC
Q 006913 186 FTSVPVIDQCEGSIYISNT-QGELYSLSAHSPYFNWIQDLS-S-------FDKAFTLTPGNNGYLYVTIPVRALVLALDT 256 (626)
Q Consensus 186 i~sspviD~~dG~LwIGT~-~GgL~~ld~~tg~~~w~~~~~-s-------~~~v~sI~~D~dG~LwVGT~~gG~l~alD~ 256 (626)
.+.+.+|+..|++||-+. ..-|..+|.++. +.-..... + ....-.|+.|.+|+|||.... ..+|.+.+
T Consensus 175 -~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~-~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~-n~~y~f~~ 251 (255)
T 3qqz_A 175 -VSGAEFNQQKNTLLVLSHESRALQEVTLVGE-VIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEP-NRFYRFTP 251 (255)
T ss_dssp -CCEEEEETTTTEEEEEETTTTEEEEECTTCC-EEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETT-TEEEEEEC
T ss_pred -ceeEEEcCCCCeEEEEECCCCeEEEEcCCCC-EEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCC-ceEEEEEe
Confidence 256778876888997655 567889998874 54444332 1 223457899999999999854 58888875
Q ss_pred C
Q 006913 257 S 257 (626)
Q Consensus 257 ~ 257 (626)
.
T Consensus 252 ~ 252 (255)
T 3qqz_A 252 Q 252 (255)
T ss_dssp -
T ss_pred c
Confidence 3
No 118
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.54 E-value=0.038 Score=57.40 Aligned_cols=246 Identities=9% Similarity=-0.056 Sum_probs=128.9
Q ss_pred ceeeeeEEeeCCEEEE-Ee-CCcEEEEcC-CCCEEEEEeCCCCCCcccCeEEecCCeEEE-EE-CCeEEEEECCCCcccc
Q 006913 37 FRLSKPLIGEDGKIYA-CS-EKTLFAFES-NGTIAWSLDLDFTCNIGTAPVHGGTGEVYI-VA-ENRVLKVDLLKIGTSE 111 (626)
Q Consensus 37 ~~~Sspvid~dG~IwI-gS-dggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~dG~IwV-gT-~ggL~~id~~~~~~~~ 111 (626)
.+.+......+|.+.+ |+ ++.+..+|. ++.....+. .. ...+.++....++.+.+ ++ ++.|..+|..++..
T Consensus 98 ~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~h-~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~-- 173 (420)
T 3vl1_A 98 DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQ-AH-VSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSN-- 173 (420)
T ss_dssp CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETT-SS-SSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCC--
T ss_pred CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecc-cc-cCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcC--
Confidence 4444445555665444 55 567888887 555443221 11 12344566666776444 45 67899999876532
Q ss_pred ceeEEEecCCCCCCCCCCeeEEEEEEcC-CeEEEEEcCCeEEEEeCC-CcEEEEECCcccccc------ccccccc---C
Q 006913 112 SATQVFYGTGSGKGGTGAIAGIAVSTSS-SSVYINVKGRALFAFMTH-GQLLWSAGPVLDQLG------YRQGCTK---T 180 (626)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~I~s~~~d~d-G~LwIgT~~gGL~a~d~~-G~~~w~~~~~~~~~~------~~~~~~~---~ 180 (626)
.. .+. .... .+..+....+ ..|..++.++.|..+|.. ++....+........ ....... .
T Consensus 174 --~~-~~~-----~h~~-~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 244 (420)
T 3vl1_A 174 --PR-TLI-----GHRA-TVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHE 244 (420)
T ss_dssp --CE-EEE-----CCSS-CEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGG
T ss_pred --ce-EEc-----CCCC-cEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeee
Confidence 11 111 1112 3444444444 457777777889999975 776655411000000 0000000 0
Q ss_pred CCCCccccceEEEcCCCeEEEEcCCCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCCe--EEEEEcCCCEEEEEECCC
Q 006913 181 DVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGY--LYVTIPVRALVLALDTSS 258 (626)
Q Consensus 181 l~~~~i~sspviD~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG~--LwVGT~~gG~l~alD~~t 258 (626)
..... ...+...+.+..|..|+.+|.|..+|.++++............+.++....+|. |+.|+ ..+.+..+|..+
T Consensus 245 ~~~~~-v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~-~dg~i~vwd~~~ 322 (420)
T 3vl1_A 245 ISTSK-KNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGY-ENGMLAQWDLRS 322 (420)
T ss_dssp GCCCC-CCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEE-TTSEEEEEETTC
T ss_pred cccCc-ccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEe-CCCeEEEEEcCC
Confidence 00000 011222321345777888888999999988766554322223456666666664 66666 457898899887
Q ss_pred CcE-EEEEecCCCCCceeeEEEeeCC-eEEEEEcCCeEEEEcC
Q 006913 259 GNI-LWHKSVGPLGSAEYAPVVDSNG-WISVGSLDGLLYSFSP 299 (626)
Q Consensus 259 G~~-~w~~~~~~l~~~~sspvvD~dG-~IWVGT~~gGLy~~d~ 299 (626)
+.. ........ ...+...... ++ .|..|+.++.|..++.
T Consensus 323 ~~~~~~~~~~~~-~~~v~~~~~~-~~~~l~s~~~d~~v~iw~~ 363 (420)
T 3vl1_A 323 PECPVGEFLINE-GTPINNVYFA-AGALFVSSGFDTSIKLDII 363 (420)
T ss_dssp TTSCSEEEEEST-TSCEEEEEEE-TTEEEEEETTTEEEEEEEE
T ss_pred CcCchhhhhccC-CCCceEEEeC-CCCEEEEecCCccEEEEec
Confidence 753 22222211 1223434333 45 5556666777777774
No 119
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=97.53 E-value=0.037 Score=55.50 Aligned_cols=267 Identities=7% Similarity=-0.090 Sum_probs=135.1
Q ss_pred eeEEeeCCE-EEEEe-CCcEEEEcC-CCC----EEEEEeCCCCCCcccCeEEecCCe--EEEEE-CCeEEEEEC-CCCcc
Q 006913 41 KPLIGEDGK-IYACS-EKTLFAFES-NGT----IAWSLDLDFTCNIGTAPVHGGTGE--VYIVA-ENRVLKVDL-LKIGT 109 (626)
Q Consensus 41 spvid~dG~-IwIgS-dggL~a~d~-~G~----~~W~~~~~~~~~i~~sp~iD~dG~--IwVgT-~ggL~~id~-~~~~~ 109 (626)
......+|. |.+++ ++.+..++. ++. ........ ..+.++....+++ |+.++ ++.|..++. .++.
T Consensus 16 ~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~- 91 (342)
T 1yfq_A 16 DIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYK---HPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPS- 91 (342)
T ss_dssp EEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECS---SCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSS-
T ss_pred EEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecC---CceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCc-
Confidence 334434554 55555 566777776 554 33222221 2344555566676 55566 788999988 7653
Q ss_pred ccceeEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEcCCeEEEEeCCC---cEEEEECCcccccccccccccCCCCCcc
Q 006913 110 SESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTHG---QLLWSAGPVLDQLGYRQGCTKTDVDCYF 186 (626)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~~gGL~a~d~~G---~~~w~~~~~~~~~~~~~~~~~~l~~~~i 186 (626)
...+... .... .+..+....++.|+.++.++.|..+|... .........+..+. ....
T Consensus 92 -----~~~~~~~---~~~~-~v~~l~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~---------~~~~- 152 (342)
T 1yfq_A 92 -----FQALTNN---EANL-GICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK---------VKNK- 152 (342)
T ss_dssp -----EEECBSC---CCCS-CEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS---------SCCC-
T ss_pred -----eEecccc---CCCC-ceEEEEeCCCCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe---------eCCc-
Confidence 1111110 0122 33333333366777888888888887421 10000000000000 0111
Q ss_pred ccceEEEcCCCeEEEEcCCCeEEEEeCCC-CeEEEE-EcCCCCCcceeeeeec-CC-eEEEEEcCCCEEEEEECCCC---
Q 006913 187 TSVPVIDQCEGSIYISNTQGELYSLSAHS-PYFNWI-QDLSSFDKAFTLTPGN-NG-YLYVTIPVRALVLALDTSSG--- 259 (626)
Q Consensus 187 ~sspviD~~dG~LwIGT~~GgL~~ld~~t-g~~~w~-~~~~s~~~v~sI~~D~-dG-~LwVGT~~gG~l~alD~~tG--- 259 (626)
..++... .+.+++++.++.|..+|.++ +..... ........+.++.... +| .+.+++ ..+.+...+...+
T Consensus 153 v~~~~~~--~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~-~dg~i~i~~~~~~~~~ 229 (342)
T 1yfq_A 153 IFTMDTN--SSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSS-IDGRVAVEFFDDQGDD 229 (342)
T ss_dssp EEEEEEC--SSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEE-TTSEEEEEECCTTCCS
T ss_pred eEEEEec--CCcEEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEe-cCCcEEEEEEcCCCcc
Confidence 1334444 34499999999999999987 442211 1111122355666665 55 455555 4567766555444
Q ss_pred ---cEEEEEecCCC-------CCceeeEEEeeCC-eEEEEEcCCeEEEEcCC-CCEEEEeeccCCCCccccCceEEEEEE
Q 006913 260 ---NILWHKSVGPL-------GSAEYAPVVDSNG-WISVGSLDGLLYSFSPS-GVLNKFSKSDTSDSVIQSSPYWFHLLG 327 (626)
Q Consensus 260 ---~~~w~~~~~~l-------~~~~sspvvD~dG-~IWVGT~~gGLy~~d~~-g~~~~~~~~~~~~~~ilssp~V~~Il~ 327 (626)
........... ...+.++...+++ .|..|+.++.|+.+|.. ++...... . .....|.++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~---~----~h~~~v~~~~- 301 (342)
T 1yfq_A 230 YNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFA---K----FNEDSVVKIA- 301 (342)
T ss_dssp TTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECC---C----CSSSEEEEEE-
T ss_pred cccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhh---c----ccCCCceEec-
Confidence 33333322110 0134456666555 58888889999999975 55443322 1 1023355566
Q ss_pred ecCCcEEEEEeeecCe
Q 006913 328 PSIGLKAILCLMVVGQ 343 (626)
Q Consensus 328 DsdG~IwI~T~t~~Gg 343 (626)
.+|.+. .+++..|-
T Consensus 302 -~~~~~l-~s~s~Dg~ 315 (342)
T 1yfq_A 302 -CSDNIL-CLATSDDT 315 (342)
T ss_dssp -ECSSEE-EEEEECTH
T ss_pred -CCCCeE-EEEecCCc
Confidence 667654 44444443
No 120
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.53 E-value=0.11 Score=55.27 Aligned_cols=228 Identities=11% Similarity=0.022 Sum_probs=125.4
Q ss_pred CCEEEEEeCCcEEEEcCCC-CEEEEEeCCCCCCcccCeEEec-CCeEEEEE--CCeEEEEECCCCccccceeEEEecCCC
Q 006913 47 DGKIYACSEKTLFAFESNG-TIAWSLDLDFTCNIGTAPVHGG-TGEVYIVA--ENRVLKVDLLKIGTSESATQVFYGTGS 122 (626)
Q Consensus 47 dG~IwIgSdggL~a~d~~G-~~~W~~~~~~~~~i~~sp~iD~-dG~IwVgT--~ggL~~id~~~~~~~~~~~~~~~~~~~ 122 (626)
...|++.....|..++.++ ....... .. ....++..|. ++.||+.. .+.|+++++++...... .......
T Consensus 83 ~~~ll~~~~~~I~~i~l~~~~~~~~~~-~~--~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~-~~~~~~~-- 156 (400)
T 3p5b_L 83 IAYLFFTNRHEVRKMTLDRSEYTSLIP-NL--RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSS-YDTVISR-- 156 (400)
T ss_dssp SCEEEEEETTEEEEECTTSCSCEEEEC-SC--SCEEEEEEETTTTEEEEEETTTTEEEEEEC------CC-CEEEECS--
T ss_pred cceeEEeccceeEEEccCCcceeEecc-cc--CcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCc-ceEEEeC--
Confidence 3456666667788888743 3322221 11 1223455563 68899886 57899998875210000 1111111
Q ss_pred CCCCCCCeeEEEEEE-cCCeEEEEEc-CCeEEEEeCCCcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEE
Q 006913 123 GKGGTGAIAGIAVST-SSSSVYINVK-GRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIY 200 (626)
Q Consensus 123 ~~~~~~~~I~s~~~d-~dG~LwIgT~-~gGL~a~d~~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~Lw 200 (626)
..... ..+..+ .+++||+... .+.|..++++|...-... . ..+ .....+++|+.+|.||
T Consensus 157 ---~~~~p-~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~--------~----~~~---~~P~~iavdp~~g~ly 217 (400)
T 3p5b_L 157 ---DIQAP-DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLF--------R----ENG---SKPRAIVVDPVHGFMY 217 (400)
T ss_dssp ---SCSCE-EEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEE--------E----CSS---CCEEEEEEETTTTEEE
T ss_pred ---CCCCc-ccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEE--------e----CCC---CCcceEEEecccCeEE
Confidence 01112 234445 4889998864 467888888865432210 0 000 0123467885478899
Q ss_pred EEcC--CCeEEEEeCCCCeEEEEEcCCCCCcceeeeee-cCCeEEEEEcCCCEEEEEECCCCcEEEEE-ecC-CCCCcee
Q 006913 201 ISNT--QGELYSLSAHSPYFNWIQDLSSFDKAFTLTPG-NNGYLYVTIPVRALVLALDTSSGNILWHK-SVG-PLGSAEY 275 (626)
Q Consensus 201 IGT~--~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D-~dG~LwVGT~~gG~l~alD~~tG~~~w~~-~~~-~l~~~~s 275 (626)
+..+ .+.|++++.++......... .......++.| .+++||++......|..+|.. |...... ... .+. ...
T Consensus 218 ~td~~~~~~I~~~~~dG~~~~~~~~~-~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~d-G~~~~~~~~~~~~l~-~P~ 294 (400)
T 3p5b_L 218 WTDWGTPAKIKKGGLNGVDIYSLVTE-NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN-GGNRKTILEDEKRLA-HPF 294 (400)
T ss_dssp EEECSSSCCEEEEETTSCSCEEEECS-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETT-SCCCEEEEECSSTTS-SEE
T ss_pred EEeCCCCCEEEEEeCCCCccEEEEEC-CCCceEEEEEEeCCCEEEEEECCCCEEEEEeCC-CCccEEEEeCCCCCC-CCE
Confidence 9875 36799999987544333221 22345678888 577999998666789999864 4333222 211 111 233
Q ss_pred eEEEeeCCeEEEEE-cCCeEEEEcC-CCCE
Q 006913 276 APVVDSNGWISVGS-LDGLLYSFSP-SGVL 303 (626)
Q Consensus 276 spvvD~dG~IWVGT-~~gGLy~~d~-~g~~ 303 (626)
.+.++ ++.||+.. .++.|+++++ +|+.
T Consensus 295 gl~v~-~~~lywtd~~~~~V~~~~~~~G~~ 323 (400)
T 3p5b_L 295 SLAVF-EDKVFWTDIINEAIFSANRLTGSD 323 (400)
T ss_dssp EEEEE-TTEEEEEESSSCSEEEEESSSCCC
T ss_pred EEEEe-CCEEEEecCCCCeEEEEEcCCCCc
Confidence 46666 55666654 4567899984 5643
No 121
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.51 E-value=0.027 Score=58.95 Aligned_cols=234 Identities=13% Similarity=0.074 Sum_probs=115.9
Q ss_pred CeEEecCCeEEEEE-CCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEc----CCeEEEEEcC------Ce
Q 006913 82 APVHGGTGEVYIVA-ENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTS----SSSVYINVKG------RA 150 (626)
Q Consensus 82 sp~iD~dG~IwVgT-~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~----dG~LwIgT~~------gG 150 (626)
.+.++.+|+|||+. .+.|++++ .+ . ..................+ +..+. ++.||+.... +.
T Consensus 35 ~ia~~pdG~l~V~e~~g~I~~i~-~g-~-----~~~~~~~~v~~~g~~~p~g-ia~~pdf~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 35 ALAFLPDGGMLIAERPGRIRLFR-EG-R-----LSTYAELSVYHRGESGLLG-LALHPRFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp EEEECTTSCEEEEETTTEEEEEE-TT-E-----EEEEEECCCCCSTTCSEEE-EEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred EEEEcCCCeEEEEeCCCeEEEEE-CC-C-----ccEeecceEeecCCCCcee-EEECCCCCCCCEEEEEEecCCCCCccE
Confidence 45667889999987 78899998 32 1 1111111000011122333 33444 4799997542 56
Q ss_pred EEEEeCC-CcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcC--------------CCeEEEEeCCC
Q 006913 151 LFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNT--------------QGELYSLSAHS 215 (626)
Q Consensus 151 L~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~--------------~GgL~~ld~~t 215 (626)
|.+++.+ +... .....+..++...+ ..+....+++++ +|.||++.. .|.|+++++++
T Consensus 107 v~r~~~~~~~~~-~~~~l~~~~p~~~~------~~h~~~~l~~~p-dG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG 178 (352)
T 2ism_A 107 VVRLRHLGERGV-LDRVVLDGIPARPH------GLHSGGRIAFGP-DGMLYVTTGEVYERELAQDLASLGGKILRLTPEG 178 (352)
T ss_dssp EEEEEECSSCEE-EEEEEEEEECCCTT------CCCCCCCEEECT-TSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTS
T ss_pred EEEEEeCCCCcC-ceEEEEEeCCCCCC------CCcCCceEEECC-CCCEEEEECCCCCCccccCCCCCceEEEEEcCCC
Confidence 8888865 3211 00000001110000 011123467886 899999863 26799999876
Q ss_pred C--------------eEEEEEcCCCCCcceeeeeec-CCeEEEEEcCCCE--------EEEEECCCCcEEEEEe------
Q 006913 216 P--------------YFNWIQDLSSFDKAFTLTPGN-NGYLYVTIPVRAL--------VLALDTSSGNILWHKS------ 266 (626)
Q Consensus 216 g--------------~~~w~~~~~s~~~v~sI~~D~-dG~LwVGT~~gG~--------l~alD~~tG~~~w~~~------ 266 (626)
. ...|... ......++.|. +|+||++...... +..+. ..+..-|...
T Consensus 179 ~~p~~npf~~~~~~~~~i~a~G---~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~-~G~nyGwp~~~g~~~~ 254 (352)
T 2ism_A 179 EPAPGNPFLGRRGARPEVYSLG---HRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIV-PGGNYGWPRVVGRGND 254 (352)
T ss_dssp SBCTTCTTTTCTTSCTTEEEEC---CSEECCCEECTTTCCEEEEEECC------CCCEEEEEC-TTCBCCTTTCCSCCCC
T ss_pred CCCCCCcccCCCCCCccEEEEc---CCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEec-cCCcCCCCcccCCCCC
Confidence 1 1223221 12234567777 7899999753333 44443 2222212100
Q ss_pred ---cCCC-----CCceeeEEEeeCCeEEEEEcC-CeEEEEcCC--CCEEEEeeccCCCCccccCceEEEEEEecCCcEEE
Q 006913 267 ---VGPL-----GSAEYAPVVDSNGWISVGSLD-GLLYSFSPS--GVLNKFSKSDTSDSVIQSSPYWFHLLGPSIGLKAI 335 (626)
Q Consensus 267 ---~~~l-----~~~~sspvvD~dG~IWVGT~~-gGLy~~d~~--g~~~~~~~~~~~~~~ilssp~V~~Il~DsdG~IwI 335 (626)
..+. ......+++ .+|.+|++... +.|++++.+ +........ ...+.....+..+..+.+|.||+
T Consensus 255 ~~~~~p~~~~~~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~---~~~~~~~~rp~~v~~~pdG~lyv 330 (352)
T 2ism_A 255 PRYRDPLYFWPQGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRV---ETALSGFGRLREVQVGPDGALYV 330 (352)
T ss_dssp TTSCCCSEECTTCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEE---EEEEESSCCEEEEEECTTSCEEE
T ss_pred CCCcCCeEecCCCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecch---heecccCCCeeEEEECCCCcEEE
Confidence 0000 011233445 37899999864 468887754 321100000 00000112356788899999998
Q ss_pred EEee
Q 006913 336 LCLM 339 (626)
Q Consensus 336 ~T~t 339 (626)
.+..
T Consensus 331 ~~~~ 334 (352)
T 2ism_A 331 TTSN 334 (352)
T ss_dssp EECS
T ss_pred EEeC
Confidence 7643
No 122
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.50 E-value=0.015 Score=61.04 Aligned_cols=241 Identities=11% Similarity=0.106 Sum_probs=123.7
Q ss_pred eeeEEeeCCE-EEEEe-CCcEEEEcCCCCEEEEEe-CCC---CC-CcccCeEEec----CCeEEEEE-C--------CeE
Q 006913 40 SKPLIGEDGK-IYACS-EKTLFAFESNGTIAWSLD-LDF---TC-NIGTAPVHGG----TGEVYIVA-E--------NRV 99 (626)
Q Consensus 40 Sspvid~dG~-IwIgS-dggL~a~d~~G~~~W~~~-~~~---~~-~i~~sp~iD~----dG~IwVgT-~--------ggL 99 (626)
..+..+.+|+ |||+. .+.|++++.+|...-.+. ... .. .-...+.++. ++.||+.. . ..|
T Consensus 21 ~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v 100 (353)
T 2g8s_A 21 WALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAV 100 (353)
T ss_dssp EEEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEEEE
T ss_pred EEEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCceeEE
Confidence 4567778999 99987 567888987665320010 110 00 0112455554 68999984 1 257
Q ss_pred EEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEcC--------------CeEEEEeCCCcE-----
Q 006913 100 LKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKG--------------RALFAFMTHGQL----- 160 (626)
Q Consensus 100 ~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~~--------------gGL~a~d~~G~~----- 160 (626)
.+++..............+...+........-..+..+.+|.||+++.+ +.|++++++|.+
T Consensus 101 ~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~np 180 (353)
T 2g8s_A 101 GYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNP 180 (353)
T ss_dssp EEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTTCT
T ss_pred EEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCCCCC
Confidence 7776643211000111111111100000001123456779999998633 468899987652
Q ss_pred ----------EEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcCCC----eEEEEeCCCCeEEEEEcC--
Q 006913 161 ----------LWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQG----ELYSLSAHSPYFNWIQDL-- 224 (626)
Q Consensus 161 ----------~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~~G----gL~~ld~~tg~~~w~~~~-- 224 (626)
+|.+ +.+ + ...+.+|..+|.||++.... .|..+.. ++.+-|-...
T Consensus 181 f~~~~~~~~~i~a~-------G~r----------n-p~gl~~d~~~g~l~~~d~g~~~~dei~~i~~-G~nyGwp~~~~~ 241 (353)
T 2g8s_A 181 FIKESGVRAEIWSY-------GIR----------N-PQGMAMNPWSNALWLNEHGPRGGDEINIPQK-GKNYGWPLATWG 241 (353)
T ss_dssp TTTSTTSCTTEEEE-------CCS----------E-EEEEEEETTTTEEEEEEECSBSCEEEECCCT-TCBCCTTTBCSS
T ss_pred CcCCCCCCccEEEE-------cCc----------C-ccceEEECCCCCEEEEecCCCCCcEEeEecc-CCcCCCCCccCC
Confidence 2221 100 0 12345674368999986532 3544432 2232221000
Q ss_pred ----------------CC----------CCcceeeeee-------cCCeEEEEEcCCCEEEEEECCCCcEEEEEe-cCCC
Q 006913 225 ----------------SS----------FDKAFTLTPG-------NNGYLYVTIPVRALVLALDTSSGNILWHKS-VGPL 270 (626)
Q Consensus 225 ----------------~s----------~~~v~sI~~D-------~dG~LwVGT~~gG~l~alD~~tG~~~w~~~-~~~l 270 (626)
.. ......++.. .+|.+|++...++.+..++..++...-... ....
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 321 (353)
T 2g8s_A 242 INYSGFKIPEAKGEIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDR 321 (353)
T ss_dssp BCTTSSCCTTCCBSSCTTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGG
T ss_pred CCCCCCccCcccCCCCCCccCCeEEeCCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCC
Confidence 00 0011122222 368999999877888888766665432211 1111
Q ss_pred CCceeeEEEeeCCeEEEEEc--CCeEEEEcC
Q 006913 271 GSAEYAPVVDSNGWISVGSL--DGLLYSFSP 299 (626)
Q Consensus 271 ~~~~sspvvD~dG~IWVGT~--~gGLy~~d~ 299 (626)
......+.++++|.|||.|. ++.||++.+
T Consensus 322 ~~rp~~v~~~pdG~lyv~td~~~g~I~ri~~ 352 (353)
T 2g8s_A 322 GQRIRDVRTGPDGYLYVLTDESSGELLKVSP 352 (353)
T ss_dssp CCCEEEEEECTTSCEEEEECSTTEEEEEEEC
T ss_pred CCceeEEEECCCCcEEEEEeCCCCEEEEEeC
Confidence 11245678899999999975 456777753
No 123
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.49 E-value=0.078 Score=56.45 Aligned_cols=196 Identities=10% Similarity=0.050 Sum_probs=111.6
Q ss_pred eeeEEe-eCCEEEEEe--CCcEEEEcCCCCE----EEEEeCCCCCCcccCeEEec-CCeEEEEE--CCeEEEEECCCCcc
Q 006913 40 SKPLIG-EDGKIYACS--EKTLFAFESNGTI----AWSLDLDFTCNIGTAPVHGG-TGEVYIVA--ENRVLKVDLLKIGT 109 (626)
Q Consensus 40 Sspvid-~dG~IwIgS--dggL~a~d~~G~~----~W~~~~~~~~~i~~sp~iD~-dG~IwVgT--~ggL~~id~~~~~~ 109 (626)
..+..| .++.||+.. .+.|++++.+|.. ........ ......+.+|. .++||+.. .+.|.++++++..
T Consensus 115 ~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~-~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~- 192 (400)
T 3p5b_L 115 VALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD-IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK- 192 (400)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSS-CSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCS-
T ss_pred eEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCC-CCCcccEEEEecCCceEEEECCCCeEEEEeCCCCc-
Confidence 344554 367888875 4578888875521 11111111 01233567786 78899986 5789999887642
Q ss_pred ccceeEEEecCCCCCCCCCCeeEEEEEE-cCCeEEEEEcC--CeEEEEeCCCcEEEEECCcccccccccccccCCCCCcc
Q 006913 110 SESATQVFYGTGSGKGGTGAIAGIAVST-SSSSVYINVKG--RALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYF 186 (626)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~I~s~~~d-~dG~LwIgT~~--gGL~a~d~~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i 186 (626)
........ .... ..+..+ .+|.||+...+ +.|..++++|...-.... ..+ ..
T Consensus 193 ----~~~l~~~~-----~~~P-~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~------------~~l---~~ 247 (400)
T 3p5b_L 193 ----RKTLFREN-----GSKP-RAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT------------ENI---QW 247 (400)
T ss_dssp ----EEEEEECS-----SCCE-EEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEEC------------SSC---SC
T ss_pred ----eEEEEeCC-----CCCc-ceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEE------------CCC---Cc
Confidence 11221110 0112 334455 57899987643 578899988654322100 000 01
Q ss_pred ccceEEEcCCCeEEEEcC-CCeEEEEeCCCCeEEEEEcC-CCCCcceeeeeecCCeEEEEEcCCCEEEEEECCCCcEEE
Q 006913 187 TSVPVIDQCEGSIYISNT-QGELYSLSAHSPYFNWIQDL-SSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILW 263 (626)
Q Consensus 187 ~sspviD~~dG~LwIGT~-~GgL~~ld~~tg~~~w~~~~-~s~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~tG~~~w 263 (626)
...+++|..+++||++.. .+.|.++|.++....-.... ........++++ ++.||+....++.+..+|+.+|+...
T Consensus 248 P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G~~~~ 325 (400)
T 3p5b_L 248 PNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVN 325 (400)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEESSSCCCCE
T ss_pred eEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCCCceE
Confidence 234677844788998864 56799999987554333222 123345566775 56788777666788888877776543
No 124
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=97.45 E-value=0.14 Score=52.76 Aligned_cols=267 Identities=10% Similarity=-0.054 Sum_probs=141.8
Q ss_pred eEEeeCCEEEE-Ee-CCcEEEEcC-CCCEEEEEeCCCCCCcccCeEEecCCeEEEEE--CCeEEEEECCCCcc---ccce
Q 006913 42 PLIGEDGKIYA-CS-EKTLFAFES-NGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVA--ENRVLKVDLLKIGT---SESA 113 (626)
Q Consensus 42 pvid~dG~IwI-gS-dggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~dG~IwVgT--~ggL~~id~~~~~~---~~~~ 113 (626)
.....+|...+ |+ ++.+..+|. ++.......... ..+.+.....+|...+.. ++.+..++...... ....
T Consensus 70 ~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~--~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~ 147 (354)
T 2pbi_B 70 MDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPC--TWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKK 147 (354)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSS--SCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGC
T ss_pred EEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCC--CCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccc
Confidence 33335565444 55 566778886 666554443322 234455566777766544 67777776543210 0000
Q ss_pred eEEEecCCCCCCCCCCeeEEEEE-EcCCeEEEEEcCCeEEEEeCC-CcEEEEECCcccccccccccccCCCCCccccceE
Q 006913 114 TQVFYGTGSGKGGTGAIAGIAVS-TSSSSVYINVKGRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPV 191 (626)
Q Consensus 114 ~~~~~~~~~~~~~~~~~I~s~~~-d~dG~LwIgT~~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspv 191 (626)
..... ..+ .+..... ..+..|..++.++-+..+|.. ++.+..+.. +. ..+ ....
T Consensus 148 ~~~~~-------h~~-~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~------------h~---~~v-~~~~ 203 (354)
T 2pbi_B 148 KSVAM-------HTN-YLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHG------------HG---ADV-LCLD 203 (354)
T ss_dssp EEEEE-------CSS-CEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEEC------------CS---SCE-EEEE
T ss_pred eeeec-------cCC-cEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcC------------CC---CCe-EEEE
Confidence 01110 112 2333333 334467778888888889974 766544300 00 011 1122
Q ss_pred E--EcCCCeEEEEcCCCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCCeEEEEEcCCCEEEEEECCCCcEEEEEecCC
Q 006913 192 I--DQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGP 269 (626)
Q Consensus 192 i--D~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~ 269 (626)
+ +..+..|+.|+.++.|..+|.++++....... ....+.++....+|.+.+....++.+..+|..++..........
T Consensus 204 ~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~-h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~ 282 (354)
T 2pbi_B 204 LAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFET-HESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKES 282 (354)
T ss_dssp ECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTT
T ss_pred EEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecC-CCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCC
Confidence 2 21135678888899999999998876543321 12345666666666544433345678888887776554333221
Q ss_pred CCCceeeEEEeeCC-eEEEEEcCCeEEEEcC-CCCEEEEeeccCCCCccccCceEEEEEEecCCcEEEEEeeecCee
Q 006913 270 LGSAEYAPVVDSNG-WISVGSLDGLLYSFSP-SGVLNKFSKSDTSDSVIQSSPYWFHLLGPSIGLKAILCLMVVGQF 344 (626)
Q Consensus 270 l~~~~sspvvD~dG-~IWVGT~~gGLy~~d~-~g~~~~~~~~~~~~~~ilssp~V~~Il~DsdG~IwI~T~t~~Ggl 344 (626)
......++...++| .|..|+.++.|..+|. +++...... -....|.++....+|... .+++..|.+
T Consensus 283 ~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~--------~h~~~v~~l~~spdg~~l-~sgs~D~~v 350 (354)
T 2pbi_B 283 IIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILF--------GHENRVSTLRVSPDGTAF-CSGSWDHTL 350 (354)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEEC--------CCSSCEEEEEECTTSSCE-EEEETTSEE
T ss_pred cccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEE--------CCCCcEEEEEECCCCCEE-EEEcCCCCE
Confidence 11123445555565 4666778889999996 465443222 122335666666677653 455444433
No 125
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=97.45 E-value=0.14 Score=52.52 Aligned_cols=249 Identities=10% Similarity=-0.025 Sum_probs=125.8
Q ss_pred CEEEEEe-CCcEEEEcC-CCC------EEEEEeCCCCCCcccCeEEecC----C---eEEE-EE-CCeEEEEECCCCccc
Q 006913 48 GKIYACS-EKTLFAFES-NGT------IAWSLDLDFTCNIGTAPVHGGT----G---EVYI-VA-ENRVLKVDLLKIGTS 110 (626)
Q Consensus 48 G~IwIgS-dggL~a~d~-~G~------~~W~~~~~~~~~i~~sp~iD~d----G---~IwV-gT-~ggL~~id~~~~~~~ 110 (626)
..|..|+ ++.+..++. ++. ....+.... ..+.++....+ | .+.+ ++ ++.|..++..++...
T Consensus 27 ~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~--~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~ 104 (397)
T 1sq9_A 27 SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHK--SGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDET 104 (397)
T ss_dssp SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCT--TCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTT
T ss_pred CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCC--CcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCccc
Confidence 5666666 567888887 555 233332211 12334444455 6 5444 45 678888887654210
Q ss_pred cceeEEEecCCCCCCCCCCeeEEEEE----EcCCe-EEEEEcCCeEEEEeCC-------CcEEE-EECCccccccccccc
Q 006913 111 ESATQVFYGTGSGKGGTGAIAGIAVS----TSSSS-VYINVKGRALFAFMTH-------GQLLW-SAGPVLDQLGYRQGC 177 (626)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~I~s~~~----d~dG~-LwIgT~~gGL~a~d~~-------G~~~w-~~~~~~~~~~~~~~~ 177 (626)
.......+...........+...... ..+.. |..++.++.|..+|.. ++.+. ... ..+......
T Consensus 105 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 181 (397)
T 1sq9_A 105 KKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPT---LELQGTVES 181 (397)
T ss_dssp CCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCE---EEEEEEECC
T ss_pred ccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCc---ceeeeeecc
Confidence 00001111110000001223333333 33445 6677777778888742 22211 000 000000000
Q ss_pred ccCCCCCccccceEEEcCCCeEEEEcCCCeEEEEeCCCCeEEEEEcC---C--CCCcceeeeeecCCe-EEEEEcCC---
Q 006913 178 TKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDL---S--SFDKAFTLTPGNNGY-LYVTIPVR--- 248 (626)
Q Consensus 178 ~~~l~~~~i~sspviD~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~---~--s~~~v~sI~~D~dG~-LwVGT~~g--- 248 (626)
. ...... ..++...+ ++.|.+|+.++.|..+|.++++....... . ....+.++....++. |.+++ ..
T Consensus 182 ~-~~~~~~-i~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~-~d~~~ 257 (397)
T 1sq9_A 182 P-MTPSQF-ATSVDISE-RGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAH-DSNSF 257 (397)
T ss_dssp S-SSSCCC-CCEEEECT-TSEEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEE-EETTE
T ss_pred c-cCCCCC-ceEEEECC-CceEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEe-cCCCC
Confidence 0 000111 23345554 44777788889999999998877665442 1 023456666666665 44444 44
Q ss_pred CEEEEEECCCCcEEEEEecCC-----------CCCceeeEEEeeCC-eEEEEEcCCeEEEEcCC-CCEEE
Q 006913 249 ALVLALDTSSGNILWHKSVGP-----------LGSAEYAPVVDSNG-WISVGSLDGLLYSFSPS-GVLNK 305 (626)
Q Consensus 249 G~l~alD~~tG~~~w~~~~~~-----------l~~~~sspvvD~dG-~IWVGT~~gGLy~~d~~-g~~~~ 305 (626)
+.+..+|..+++......... ....+..+...+++ .|..|+.++.|..+|.. ++...
T Consensus 258 g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 327 (397)
T 1sq9_A 258 GCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERIT 327 (397)
T ss_dssp EEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred ceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeE
Confidence 688889988888776654310 01234556666555 57777888899999975 54443
No 126
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.43 E-value=0.085 Score=58.12 Aligned_cols=230 Identities=9% Similarity=0.095 Sum_probs=125.9
Q ss_pred CeEEec--CCeEEEEE--CCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEE-------EcCCe-EEEEEcCC
Q 006913 82 APVHGG--TGEVYIVA--ENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVS-------TSSSS-VYINVKGR 149 (626)
Q Consensus 82 sp~iD~--dG~IwVgT--~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~-------d~dG~-LwIgT~~g 149 (626)
.+.+|. +++||++. .++|.++|++++. +....... ...... ...+.. +.+|. ||++...+
T Consensus 143 ~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~-----v~~l~~~~--~~~~~~-p~~ia~~~~~~~~d~~G~~lyvad~~~ 214 (496)
T 3kya_A 143 RLAFDPLNKDHLYICYDGHKAIQLIDLKNRM-----LSSPLNIN--TIPTNR-IRSIAFNKKIEGYADEAEYMIVAIDYD 214 (496)
T ss_dssp EEEEETTEEEEEEEEEETEEEEEEEETTTTE-----EEEEECCT--TSSCSB-EEEEEECCCBTTTBCTTCEEEEEECCC
T ss_pred EEEEccCCCCEEEEEECCCCeEEEEECCCCE-----EEEEEccC--ccccCC-CcEEEEeecccccCCCCCEEEEEeCCC
Confidence 345674 58899987 3689999988763 12222111 001111 233344 55555 99987654
Q ss_pred -------eEEEEeCC--CcEEE----EECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcC-CCeEEEEeCC-
Q 006913 150 -------ALFAFMTH--GQLLW----SAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNT-QGELYSLSAH- 214 (626)
Q Consensus 150 -------GL~a~d~~--G~~~w----~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~-~GgL~~ld~~- 214 (626)
.++.+++. |...+ .. +..+. .+ ..+++++.++.||+... ++.|+++|++
T Consensus 215 ~~~~~~~~V~~i~r~~~G~~~~~~~~~~---v~~~~----------~p---~giavdp~~g~LYvtd~~~g~V~r~d~~~ 278 (496)
T 3kya_A 215 GKGDESPSVYIIKRNADGTFDDRSDIQL---IAAYK----------QC---NGATIHPINGELYFNSYEKGQVFRLDLVD 278 (496)
T ss_dssp TTGGGEEEEEEEECCTTSCCSTTSCEEE---EEEES----------CC---CCEEECTTTCCEEEEETTTTEEEEECHHH
T ss_pred CCcccCceEEEEecCCCCceeeccccee---eccCC----------Cc---eEEEEcCCCCeEEEEECCCCEEEEEeccc
Confidence 37778643 34321 10 00000 01 22456644788999886 4559999987
Q ss_pred ------CCeE------------EEEEcCCCCCcceeeeeecCCe-EEEEEcCCCEEEEE--ECCCCcE----EEEEecCC
Q 006913 215 ------SPYF------------NWIQDLSSFDKAFTLTPGNNGY-LYVTIPVRALVLAL--DTSSGNI----LWHKSVGP 269 (626)
Q Consensus 215 ------tg~~------------~w~~~~~s~~~v~sI~~D~dG~-LwVGT~~gG~l~al--D~~tG~~----~w~~~~~~ 269 (626)
++.. .-....+.......++.+.+|+ |||+......++.+ |..++.+ .+.-..+.
T Consensus 279 ~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~ 358 (496)
T 3kya_A 279 YFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQ 358 (496)
T ss_dssp HHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTB
T ss_pred ccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCC
Confidence 5543 0111112112345788898997 89998777788884 4444432 11111110
Q ss_pred --C--C-------Ccee-eEEEe-------eCCeEEEEEc-CCeEEEEcCCCCEEEEeeccC------------CCC---
Q 006913 270 --L--G-------SAEY-APVVD-------SNGWISVGSL-DGLLYSFSPSGVLNKFSKSDT------------SDS--- 314 (626)
Q Consensus 270 --l--~-------~~~s-spvvD-------~dG~IWVGT~-~gGLy~~d~~g~~~~~~~~~~------------~~~--- 314 (626)
. + .... ..+++ .+|.|||+.. +..|.+++++|.+..+.-... .++
T Consensus 359 ~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~~G~v~TiaG~g~~~~~~~~~~~G~~dG~~~ 438 (496)
T 3kya_A 359 SGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTPEGIVSTYAGRGASTSLADGNQWGTDDGDLR 438 (496)
T ss_dssp CCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECTTCBEEEEEESCTTHHHHHSCSCCCCCEETT
T ss_pred CcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEeCCCCEEEEecccccccccCccccccCCCCch
Confidence 0 0 0122 34455 5789999964 568999999897665532100 011
Q ss_pred --ccccCceEEEEEEecC-CcEEEEE
Q 006913 315 --VIQSSPYWFHLLGPSI-GLKAILC 337 (626)
Q Consensus 315 --~ilssp~V~~Il~Dsd-G~IwI~T 337 (626)
..+..| ..|..|.+ |+|||.-
T Consensus 439 ~~a~f~~P--~gIavd~~~g~lyVaD 462 (496)
T 3kya_A 439 EVARFRDV--SGLVYDDVKEMFYVHD 462 (496)
T ss_dssp TTCCCSSE--EEEEEETTTTEEEEEE
T ss_pred hhhhcCCC--cEEEEECCCCEEEEEe
Confidence 012223 46888885 9999753
No 127
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.43 E-value=0.035 Score=57.96 Aligned_cols=210 Identities=14% Similarity=0.111 Sum_probs=112.9
Q ss_pred CeEEec-CCeEEEEE--CCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEE---EcCCeEEEEEc--------
Q 006913 82 APVHGG-TGEVYIVA--ENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVS---TSSSSVYINVK-------- 147 (626)
Q Consensus 82 sp~iD~-dG~IwVgT--~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~---d~dG~LwIgT~-------- 147 (626)
++..|. +|.+|++. .+.|..+++.++.. ....+...............+.. |.+|+||+...
T Consensus 17 ~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~----~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~ 92 (334)
T 2p9w_A 17 DTIYDRTRQVFYQSNLYKGRIEVYNPKTQSH----FNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFA 92 (334)
T ss_dssp CEEEETTTTEEEEEETTTTEEEEECTTTCCE----EEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTT
T ss_pred CccCcCCCCEEEEEeccCCEEEEEcCCCCeE----EEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccc
Confidence 455543 78999998 79999999985421 11211110000111112234444 57799999644
Q ss_pred ------CCeEEEEeCC----CcEEEEECCcccccccccc-cccCCCCCccccceEEEcCCCeEEE-EcCC-CeEEEEeCC
Q 006913 148 ------GRALFAFMTH----GQLLWSAGPVLDQLGYRQG-CTKTDVDCYFTSVPVIDQCEGSIYI-SNTQ-GELYSLSAH 214 (626)
Q Consensus 148 ------~gGL~a~d~~----G~~~w~~~~~~~~~~~~~~-~~~~l~~~~i~sspviD~~dG~LwI-GT~~-GgL~~ld~~ 214 (626)
...|.+||.. |+.+|...- .... .+ .+.+.........+++|. +|++|| ++.. +.|++++++
T Consensus 93 g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL--~~~~--~~~~~~~g~~~~~~nDvavD~-~GnaYVt~s~~~~~I~rV~pd 167 (334)
T 2p9w_A 93 DQSSHGASSFHSFNLPLSENSKPVWSVNF--EKVQ--DEFEKKAGKRPFGVVQSAQDR-DGNSYVAFALGMPAIARVSAD 167 (334)
T ss_dssp SCCSSSCCEEEEEESSCCTTCCCSEEEES--HHHH--HHHHHHHSSCCEEEEEEEECT-TSCEEEEEEESSCEEEEECTT
T ss_pred ccccCCCCEEEEEcCCcCCCCCEEEEecC--cccc--ccccccccccccCCceeEECC-CCCEEEeCCCCCCeEEEEeCC
Confidence 4679999966 888887510 0000 00 000000000113467896 999999 6667 889999999
Q ss_pred CCeEE-EEEcCCC---CCcceeeeeecCCeEEEEEcCCCEEEEEECCCCcEEEEEec---CC--CCCceee-EEEeeCCe
Q 006913 215 SPYFN-WIQDLSS---FDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSV---GP--LGSAEYA-PVVDSNGW 284 (626)
Q Consensus 215 tg~~~-w~~~~~s---~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~---~~--l~~~~ss-pvvD~dG~ 284 (626)
+.... |....+. ......|+...+|++.++....+.++++|..+.. .|.... +. ....... +....+|+
T Consensus 168 G~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv-~~~v~~~~~G~~~~~~~~dgilp~~~~G~ 246 (334)
T 2p9w_A 168 GKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPY-AWPEPVKINGDFGTLSGTEKIVTVPVGNE 246 (334)
T ss_dssp SCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSS-CCCEECEESSCCCCCTTEEEEEEEEETTE
T ss_pred CCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCc-ceeecccccCCcccccCcccccccccCCE
Confidence 86444 6543321 1113356777788655555457889999976432 211211 10 0011122 23345787
Q ss_pred E-EEEEcCCeEEEEc-CCC
Q 006913 285 I-SVGSLDGLLYSFS-PSG 301 (626)
Q Consensus 285 I-WVGT~~gGLy~~d-~~g 301 (626)
+ +|+....+++.+- .++
T Consensus 247 vllV~~~~~~~~~l~S~Dg 265 (334)
T 2p9w_A 247 SVLVGARAPYAISFRSWDN 265 (334)
T ss_dssp EEEEEEETTEEEEEECSST
T ss_pred EEEEEcCCCCEEEEECCCC
Confidence 7 6665445555554 445
No 128
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.42 E-value=0.16 Score=52.79 Aligned_cols=231 Identities=6% Similarity=-0.057 Sum_probs=126.0
Q ss_pred eeeeEEeeCCE-EEEEe-CCcEEEEcC-CCCEEEEEeCCCCCCcccCeEEecCCeEEEEE-CCeEEEEECCCCcccccee
Q 006913 39 LSKPLIGEDGK-IYACS-EKTLFAFES-NGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVA-ENRVLKVDLLKIGTSESAT 114 (626)
Q Consensus 39 ~Sspvid~dG~-IwIgS-dggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~dG~IwVgT-~ggL~~id~~~~~~~~~~~ 114 (626)
........+|. |.+|+ ++.+..+|. +++....+.... ..+.++..+ ...+..++ ++.|..+|...... .
T Consensus 137 v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~--~~v~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~----~ 209 (401)
T 4aez_A 137 VASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQ--ARVGCLSWN-RHVLSSGSRSGAIHHHDVRIANH----Q 209 (401)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCS--SCEEEEEEE-TTEEEEEETTSEEEEEETTSSSC----E
T ss_pred EEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCC--CceEEEEEC-CCEEEEEcCCCCEEEEecccCcc----e
Confidence 33444444554 44455 567888887 666654443211 223344443 34555566 78888888874221 1
Q ss_pred EEEecCCCCCCCCCCeeEEEEEEcC-CeEEEEEcCCeEEEEeCC-CcEEEEECCcccccccccccccCCCCCccccceEE
Q 006913 115 QVFYGTGSGKGGTGAIAGIAVSTSS-SSVYINVKGRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVI 192 (626)
Q Consensus 115 ~~~~~~~~~~~~~~~~I~s~~~d~d-G~LwIgT~~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspvi 192 (626)
...+. .... .+..+....+ ..|..++.++.|..+|.. ++....... . ... ..++..
T Consensus 210 ~~~~~-----~~~~-~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~------------~---~~~-v~~~~~ 267 (401)
T 4aez_A 210 IGTLQ-----GHSS-EVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTN------------H---NAA-VKAVAW 267 (401)
T ss_dssp EEEEE-----CCSS-CEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECC------------C---SSC-CCEEEE
T ss_pred eeEEc-----CCCC-CeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecC------------C---cce-EEEEEE
Confidence 11111 1112 3343333334 456777878889999975 666654311 0 011 133444
Q ss_pred EcCCCeEEE-E--cCCCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCCeEEEEEc--CCCEEEEEECCCCcEEEEEec
Q 006913 193 DQCEGSIYI-S--NTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIP--VRALVLALDTSSGNILWHKSV 267 (626)
Q Consensus 193 D~~dG~LwI-G--T~~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG~LwVGT~--~gG~l~alD~~tG~~~w~~~~ 267 (626)
.+.+..+++ | +.++.|..+|.++++........ ..+.++....+|...+.+. ..+.+..+|..++........
T Consensus 268 ~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~--~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~ 345 (401)
T 4aez_A 268 CPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAG--SQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDI 345 (401)
T ss_dssp CTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECS--SCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEE
T ss_pred CCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCC--CcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEe
Confidence 431344555 3 36889999999988776654422 2355666666776555432 356777788777655443222
Q ss_pred CCCCCceeeEEEeeCC-eEEEEEcCCeEEEEcCC
Q 006913 268 GPLGSAEYAPVVDSNG-WISVGSLDGLLYSFSPS 300 (626)
Q Consensus 268 ~~l~~~~sspvvD~dG-~IWVGT~~gGLy~~d~~ 300 (626)
......+..+...++| .|..|+.++.|..++..
T Consensus 346 ~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~ 379 (401)
T 4aez_A 346 PAHDTRVLYSALSPDGRILSTAASDENLKFWRVY 379 (401)
T ss_dssp ECCSSCCCEEEECTTSSEEEEECTTSEEEEEECC
T ss_pred cCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECC
Confidence 1111224446666666 46667778888888864
No 129
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.42 E-value=0.14 Score=52.00 Aligned_cols=221 Identities=10% Similarity=-0.002 Sum_probs=125.1
Q ss_pred eCCEEEE-Ee-CCcEEEEcC-CCCEEEEEeCCCCCCcccCeEEecCCeEEEE-E-CCeEEEEECCCCccccceeEEEecC
Q 006913 46 EDGKIYA-CS-EKTLFAFES-NGTIAWSLDLDFTCNIGTAPVHGGTGEVYIV-A-ENRVLKVDLLKIGTSESATQVFYGT 120 (626)
Q Consensus 46 ~dG~IwI-gS-dggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~dG~IwVg-T-~ggL~~id~~~~~~~~~~~~~~~~~ 120 (626)
.++.+.+ ++ ++.+..+|. +++....+.... ....++....+|+..+. + ++.+..++..++.. ...+..
T Consensus 90 ~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~--~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~-----~~~~~~ 162 (321)
T 3ow8_A 90 HTLPIAASSSLDAHIRLWDLENGKQIKSIDAGP--VDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKK-----EYSLDT 162 (321)
T ss_dssp SSSSEEEEEETTSEEEEEETTTTEEEEEEECCT--TCCCCEEECTTSSEEEEECTTSEEEEEETTTCSE-----EEEEEC
T ss_pred CCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCC--ccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCce-----eEEecC
Confidence 4444444 44 567788887 676654443322 12345566677775554 4 67888888877531 222211
Q ss_pred CCCCCCCCCeeEEEEEEcCC-eEEEEEcCCeEEEEeCC-CcEEEEECCcccccccccccccCCCCCccccceEEEcCCCe
Q 006913 121 GSGKGGTGAIAGIAVSTSSS-SVYINVKGRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGS 198 (626)
Q Consensus 121 ~~~~~~~~~~I~s~~~d~dG-~LwIgT~~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~ 198 (626)
....+..+....+| .|..|+.++-|..+|.. ++.+..+.. .. .. ..++...+.+..
T Consensus 163 ------~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~------------h~---~~-v~~l~~spd~~~ 220 (321)
T 3ow8_A 163 ------RGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEG------------HA---MP-IRSLTFSPDSQL 220 (321)
T ss_dssp ------SSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC------------CS---SC-CCEEEECTTSCE
T ss_pred ------CCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcc------------cC---Cc-eeEEEEcCCCCE
Confidence 11234444444454 46667777888899975 766544311 00 11 133455542345
Q ss_pred EEEEcCCCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCCeEEEEEcCCCEEEEEECCCCcEEEEEecCCCCCceeeEE
Q 006913 199 IYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPV 278 (626)
Q Consensus 199 LwIGT~~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~~~sspv 278 (626)
|..|+.++.|..+|.+++....... +....+.++....+|...+....++.+...|..+++....+... ...+.++.
T Consensus 221 l~s~s~dg~i~iwd~~~~~~~~~~~-~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h--~~~v~~v~ 297 (321)
T 3ow8_A 221 LVTASDDGYIKIYDVQHANLAGTLS-GHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDH--QDQVWGVK 297 (321)
T ss_dssp EEEECTTSCEEEEETTTCCEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCC--SSCEEEEE
T ss_pred EEEEcCCCeEEEEECCCcceeEEEc-CCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCC--CCcEEEEE
Confidence 6677778889999998876543322 11234566666667754444334567888898888776544222 12344566
Q ss_pred EeeCC-eEEEEEcCCeEEEEc
Q 006913 279 VDSNG-WISVGSLDGLLYSFS 298 (626)
Q Consensus 279 vD~dG-~IWVGT~~gGLy~~d 298 (626)
..++| .|..++.++.|..+|
T Consensus 298 ~s~~g~~l~s~~~d~~i~vwd 318 (321)
T 3ow8_A 298 YNGNGSKIVSVGDDQEIHIYD 318 (321)
T ss_dssp ECTTSSEEEEEETTCCEEEEE
T ss_pred ECCCCCEEEEEeCCCeEEEEe
Confidence 66565 455566666666665
No 130
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=97.41 E-value=0.16 Score=56.30 Aligned_cols=236 Identities=10% Similarity=0.000 Sum_probs=129.5
Q ss_pred EeeCCEEEEEe--CCcEEEEcC-CCCEEEEEeCCCCCCcccCeEEecCCe-EEEEE-CCeEEEEEC--CCCccccceeEE
Q 006913 44 IGEDGKIYACS--EKTLFAFES-NGTIAWSLDLDFTCNIGTAPVHGGTGE-VYIVA-ENRVLKVDL--LKIGTSESATQV 116 (626)
Q Consensus 44 id~dG~IwIgS--dggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~dG~-IwVgT-~ggL~~id~--~~~~~~~~~~~~ 116 (626)
++.+|.+|+.. ++.+..+|. +++.+..+..+. . ...+.++.+|+ +|++. ++.|..+|. .++. ..-
T Consensus 145 ~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~--~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~-----~~~ 216 (543)
T 1nir_A 145 LDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGY--A-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPT-----KVA 216 (543)
T ss_dssp CCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECST--T-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCE-----EEE
T ss_pred cCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCc--c-cceEEECCCCCEEEEECCCCeEEEEECcCCCCc-----EEE
Confidence 45678888875 567999998 888776665432 1 34555677775 67776 788999998 5542 111
Q ss_pred EecCCCCCCCCCCeeEEEEEEc-----CCeEEEEEc-CCeEEEEeCC-CcEEEEECCcccccccccccccCCCCCccccc
Q 006913 117 FYGTGSGKGGTGAIAGIAVSTS-----SSSVYINVK-GRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSV 189 (626)
Q Consensus 117 ~~~~~~~~~~~~~~I~s~~~d~-----dG~LwIgT~-~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~ss 189 (626)
.+.. +.....+.... +..||++.+ ++.+..+|.. ++.+..... .+... .........-...
T Consensus 217 ~i~~-------g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~----~g~~~-~~~~~~~~~~v~~ 284 (543)
T 1nir_A 217 EIKI-------GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVST----RGMTV-DTQTYHPEPRVAA 284 (543)
T ss_dssp EEEC-------CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEEC----CEECS-SSCCEESCCCEEE
T ss_pred EEec-------CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecc----cCccc-CccccccCCceEE
Confidence 1111 11223333443 456888875 5788889974 777654311 00000 0000000000122
Q ss_pred eEEEcCCCeEEEEc-CCCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCCe-EEEEEcCCCEEEEEECCCCcEEEEEec
Q 006913 190 PVIDQCEGSIYISN-TQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGY-LYVTIPVRALVLALDTSSGNILWHKSV 267 (626)
Q Consensus 190 pviD~~dG~LwIGT-~~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG~-LwVGT~~gG~l~alD~~tG~~~w~~~~ 267 (626)
++....++.+++.. ..+.|..+|..+++............+..+..+.+|+ +|++....+.+..+|..+|+.......
T Consensus 285 i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~ 364 (543)
T 1nir_A 285 IIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDV 364 (543)
T ss_dssp EEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEEC
T ss_pred EEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeecc
Confidence 33332134455443 3567888888765432211111112244566777886 777765556888899999988766554
Q ss_pred CCCCCc-eeeEEEeeC-CeEEEEEc--CCeEEEEcC
Q 006913 268 GPLGSA-EYAPVVDSN-GWISVGSL--DGLLYSFSP 299 (626)
Q Consensus 268 ~~l~~~-~sspvvD~d-G~IWVGT~--~gGLy~~d~ 299 (626)
+..... ...-..+++ |.+|+... ++.|..++.
T Consensus 365 g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~ 400 (543)
T 1nir_A 365 GKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGT 400 (543)
T ss_dssp SSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEEC
T ss_pred CCCCCCCCCcccCCCCCccEEEeccCCCceEEEEEe
Confidence 311000 011123444 88998763 467777875
No 131
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.38 E-value=0.099 Score=54.76 Aligned_cols=230 Identities=14% Similarity=0.117 Sum_probs=119.4
Q ss_pred CeEEecCCeEEEEE-CCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEc----CCeEEEEEcC--------
Q 006913 82 APVHGGTGEVYIVA-ENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTS----SSSVYINVKG-------- 148 (626)
Q Consensus 82 sp~iD~dG~IwVgT-~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~----dG~LwIgT~~-------- 148 (626)
.+.++.+|+|||+. .+.|++++.++. ..+. .............+ +..+. ++.||+....
T Consensus 33 ~ia~~pdG~l~V~e~~g~I~~~d~~G~------~~~~-~~~v~~~g~~g~~g-ia~~pdf~~~g~lyv~~~~~~~~~~~~ 104 (354)
T 3a9g_A 33 SIAPLGGGRYLVTERPGRLVLISPSGK------KLVA-SFDVANVGEAGLLG-LALHPEFPKKSWVYLYASYFAEGGHIR 104 (354)
T ss_dssp EEEEEETTEEEEEETTTEEEEECSSCE------EEEE-ECCCCCSTTCSEEE-EEECTTTTTSCEEEEEEEEECGGGCEE
T ss_pred EEEEcCCCeEEEEeCCCEEEEEeCCCc------eEee-ccceeecCCCceee-EEeCCCCCcCCEEEEEEeccCCCCCcc
Confidence 56677899999998 789999975431 0111 00000011122333 33344 5899997542
Q ss_pred CeEEEEeCCCc---EEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcC--------------CCeEEEE
Q 006913 149 RALFAFMTHGQ---LLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNT--------------QGELYSL 211 (626)
Q Consensus 149 gGL~a~d~~G~---~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~--------------~GgL~~l 211 (626)
+.|.+++.++. .. ....++..++ .+ ..+....+++++ +|.||++.. .|.|+++
T Consensus 105 ~~v~r~~~~~~~~~~~-~~~~l~~~~~--~~------~~h~~~~l~~~p-DG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri 174 (354)
T 3a9g_A 105 NRVIRGRLDGSTFKLK-EVKTLIDGIP--GA------YIHNGGRIRFGP-DGMLYITTGDAADPRLAQDLSSLAGKILRV 174 (354)
T ss_dssp EEEEEEEECSSSCCEE-EEEEEEEEEE--CC------SSCCCCCEEECT-TSCEEEECCCTTCGGGGTCTTCCSSEEEEE
T ss_pred eEEEEEEECCCCcCcC-ccEEEEEcCC--CC------CCcCCceEEECC-CCcEEEEECCCCCCccccCCCCCCeEEEEE
Confidence 56888886532 11 0000000011 00 011124467886 899999853 2679999
Q ss_pred eCCCC---------eEEEEEcCCCCCcceeeeeec-CCeEEEEEcCC---CEEEEEECCCCcEEEEE-------------
Q 006913 212 SAHSP---------YFNWIQDLSSFDKAFTLTPGN-NGYLYVTIPVR---ALVLALDTSSGNILWHK------------- 265 (626)
Q Consensus 212 d~~tg---------~~~w~~~~~s~~~v~sI~~D~-dG~LwVGT~~g---G~l~alD~~tG~~~w~~------------- 265 (626)
++++. ...|... ......++.|. +|+||++.... ..+..+. ..+..-|..
T Consensus 175 ~~dG~~p~~npf~~~~i~a~G---~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~-~G~nyGwp~~~g~~~~~~~~~p 250 (354)
T 3a9g_A 175 DEEGRPPADNPFPNSPIWSYG---HRNPQGIDWHRASGVMVATEHGPVGHDEVNIIL-KGGNYGWPLATGKAGRGEFVDP 250 (354)
T ss_dssp CTTSCCCTTSSSTTCCEEEEC---CSCCCEEEECTTTCCEEEEECCSSSCCEEEEEC-TTCBCCTTTCCSCCCCTTSCCC
T ss_pred cCCCCCCCCCCCCCCcEEEEc---cCCcceEEEeCCCCCEEEEecCCCCCcEEEEec-CCCcCCCCcccCCCCCCCCcCC
Confidence 98763 1334322 22344677887 79999987432 2344443 222211110
Q ss_pred --ecCCCCCceeeEEE-------eeCCeEEEEEcC-CeEEEEcCC--CCEEEEeeccCCCCccccCceEEEEEEecCCcE
Q 006913 266 --SVGPLGSAEYAPVV-------DSNGWISVGSLD-GLLYSFSPS--GVLNKFSKSDTSDSVIQSSPYWFHLLGPSIGLK 333 (626)
Q Consensus 266 --~~~~l~~~~sspvv-------D~dG~IWVGT~~-gGLy~~d~~--g~~~~~~~~~~~~~~ilssp~V~~Il~DsdG~I 333 (626)
..+........+.+ +.+|.+|++... +.|++++.+ ++........ .+ ....+..+..+.+|.|
T Consensus 251 ~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~-~~----~~~rp~~v~~~pDG~l 325 (354)
T 3a9g_A 251 VIDTGSETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFF-KN----VFGRLRDVVIDDDGGI 325 (354)
T ss_dssp SEECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEEC-TT----TSCCEEEEEECTTSCE
T ss_pred EeecCCCCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeec-cC----CCCCeeEEEECCCCcE
Confidence 00000011334444 357899999864 478888765 3332111100 11 0123567888999999
Q ss_pred EEEEe
Q 006913 334 AILCL 338 (626)
Q Consensus 334 wI~T~ 338 (626)
|+.+.
T Consensus 326 yv~~~ 330 (354)
T 3a9g_A 326 LISTS 330 (354)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 98764
No 132
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=97.37 E-value=0.13 Score=51.57 Aligned_cols=233 Identities=9% Similarity=0.008 Sum_probs=117.9
Q ss_pred eeEEeeCC-EEEEEe-----CCcEEEEcC-CCCEEEEEeCCCCCCcccCeEEecC---Ce-EEEEE-CCeEEEEECCCCc
Q 006913 41 KPLIGEDG-KIYACS-----EKTLFAFES-NGTIAWSLDLDFTCNIGTAPVHGGT---GE-VYIVA-ENRVLKVDLLKIG 108 (626)
Q Consensus 41 spvid~dG-~IwIgS-----dggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~d---G~-IwVgT-~ggL~~id~~~~~ 108 (626)
......+| .+.++. ++.+..+|. +++.......... ..+.++....+ |. ++.++ ++.|..++..++.
T Consensus 23 ~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 101 (357)
T 3i2n_A 23 DCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKA-KPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPE 101 (357)
T ss_dssp EEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEES-SCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCS
T ss_pred EEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeeccc-CcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCC
Confidence 33343555 454443 456777776 5554322211111 12233333344 34 55566 7788888887653
Q ss_pred cccceeEEEecCCCCCCCCCCeeEEEE-------EEcCCeEEEEEcCCeEEEEeCC-Cc-EEEEECCccccccccccccc
Q 006913 109 TSESATQVFYGTGSGKGGTGAIAGIAV-------STSSSSVYINVKGRALFAFMTH-GQ-LLWSAGPVLDQLGYRQGCTK 179 (626)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~I~s~~-------~d~dG~LwIgT~~gGL~a~d~~-G~-~~w~~~~~~~~~~~~~~~~~ 179 (626)
. ....+. .... .+..+. ...+..|..++.++.|..+|.. ++ ....+.. ..
T Consensus 102 ~----~~~~~~-----~~~~-~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~-------~~---- 160 (357)
T 3i2n_A 102 M----PVYSVK-----GHKE-IINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEP-------VQ---- 160 (357)
T ss_dssp S----CSEEEC-----CCSS-CEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECC-------CT----
T ss_pred c----cEEEEE-----eccc-ceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccc-------cC----
Confidence 0 011111 1112 233321 1233457777777888888864 43 3332211 00
Q ss_pred CCCCCccccceE----EEcCCCeEEEEcCCCeEEEEeCCCCeEEEEEcCCCCCcceeeeeec---CC-eEEEEEcCCCEE
Q 006913 180 TDVDCYFTSVPV----IDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGN---NG-YLYVTIPVRALV 251 (626)
Q Consensus 180 ~l~~~~i~sspv----iD~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~---dG-~LwVGT~~gG~l 251 (626)
......+ .++. ..+.+..|..|+.++.|..+|.++++..+..... ..+.++.... ++ .|++++ .++.+
T Consensus 161 ~~~~~~v-~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~l~~~~-~dg~i 236 (357)
T 3i2n_A 161 GENKRDC-WTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIK--NGVCSLEFDRKDISMNKLVATS-LEGKF 236 (357)
T ss_dssp TSCCCCE-EEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECS--SCEEEEEESCSSSSCCEEEEEE-STTEE
T ss_pred CCCCCce-EEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCC--CceEEEEcCCCCCCCCEEEEEC-CCCeE
Confidence 0000011 1122 2222556777888899999999998876654322 2355555554 44 566666 45677
Q ss_pred EEEECCCCcEEEEEe---cCCCCCceeeEEEeeCCe--EEEEEcCCeEEEEcC
Q 006913 252 LALDTSSGNILWHKS---VGPLGSAEYAPVVDSNGW--ISVGSLDGLLYSFSP 299 (626)
Q Consensus 252 ~alD~~tG~~~w~~~---~~~l~~~~sspvvD~dG~--IWVGT~~gGLy~~d~ 299 (626)
..+|..++....... .......+..+...+++. +..|+.++.|..++.
T Consensus 237 ~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~ 289 (357)
T 3i2n_A 237 HVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKY 289 (357)
T ss_dssp EEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEE
T ss_pred EEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeec
Confidence 777755443221111 001112345566666665 777888888888874
No 133
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.35 E-value=0.093 Score=54.34 Aligned_cols=220 Identities=11% Similarity=0.009 Sum_probs=122.5
Q ss_pred EEEEEe-CCcEEEEcC-CCCEEEEEeCCCCCCcccCeEEecCCeEE-EEE-CCeEEEEECCCCccccceeEEEecCCCCC
Q 006913 49 KIYACS-EKTLFAFES-NGTIAWSLDLDFTCNIGTAPVHGGTGEVY-IVA-ENRVLKVDLLKIGTSESATQVFYGTGSGK 124 (626)
Q Consensus 49 ~IwIgS-dggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~dG~Iw-VgT-~ggL~~id~~~~~~~~~~~~~~~~~~~~~ 124 (626)
.|+.++ ++.+..+|. ++... ..... ...........+|++. .++ ++.|..+|..++. ....+.
T Consensus 70 ~l~~~~~d~~v~i~d~~~~~~~--~~~~~-~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-----~~~~~~----- 136 (420)
T 3vl1_A 70 HLYKARLDGHDFLFNTIIRDGS--KMLKR-ADYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNL-----QREIDQ----- 136 (420)
T ss_dssp TEEEEEETTEEEEEECCSEETT--TTSCS-CCEEEEEEECSSSCEEEEEETTSCEEEECTTSCE-----EEEETT-----
T ss_pred eEEEEEcCCcEEEEEeccccee--eEEec-CCceEEEEEecCCCEEEEEECCCCEEEEeCCCcc-----eeeecc-----
Confidence 355555 667777776 32211 00010 1122222344566544 445 6788888887652 111111
Q ss_pred CCCCCeeEEEEEEcCC-eEEEEEcCCeEEEEeCC-CcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEE
Q 006913 125 GGTGAIAGIAVSTSSS-SVYINVKGRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYIS 202 (626)
Q Consensus 125 ~~~~~~I~s~~~d~dG-~LwIgT~~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIG 202 (626)
.. ...+..+....++ .|..++.++.|..+|.. ++....+.. + ... ..++...+.+..|..+
T Consensus 137 ~h-~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~------------h---~~~-v~~~~~~~~~~~l~s~ 199 (420)
T 3vl1_A 137 AH-VSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIG------------H---RAT-VTDIAIIDRGRNVLSA 199 (420)
T ss_dssp SS-SSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEEC------------C---SSC-EEEEEEETTTTEEEEE
T ss_pred cc-cCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcC------------C---CCc-EEEEEEcCCCCEEEEE
Confidence 11 2234444444444 57777877889999974 654433200 0 011 2334555424557778
Q ss_pred cCCCeEEEEeCCCCeEEEEEcCC--CCCc---------------------ceeeeeecCCe-EEEEEcCCCEEEEEECCC
Q 006913 203 NTQGELYSLSAHSPYFNWIQDLS--SFDK---------------------AFTLTPGNNGY-LYVTIPVRALVLALDTSS 258 (626)
Q Consensus 203 T~~GgL~~ld~~tg~~~w~~~~~--s~~~---------------------v~sI~~D~dG~-LwVGT~~gG~l~alD~~t 258 (626)
+.++.|..+|.++++........ .... +.++....+|. |.+|+ ..+.+..+|..+
T Consensus 200 ~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~i~d~~~ 278 (420)
T 3vl1_A 200 SLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGH-VSGVITVHNVFS 278 (420)
T ss_dssp ETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEE-TTSCEEEEETTT
T ss_pred cCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEc-CCCeEEEEECCC
Confidence 88888999999988876654321 0111 11223345664 55555 457888899888
Q ss_pred CcEEEEEecCCCCCceeeEEEeeCC--eEEEEEcCCeEEEEcCC
Q 006913 259 GNILWHKSVGPLGSAEYAPVVDSNG--WISVGSLDGLLYSFSPS 300 (626)
Q Consensus 259 G~~~w~~~~~~l~~~~sspvvD~dG--~IWVGT~~gGLy~~d~~ 300 (626)
++......... ...+.++...+++ .|+.|+.++.|..+|..
T Consensus 279 ~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~ 321 (420)
T 3vl1_A 279 KEQTIQLPSKF-TCSCNSLTVDGNNANYIYAGYENGMLAQWDLR 321 (420)
T ss_dssp CCEEEEECCTT-SSCEEEEEECSSCTTEEEEEETTSEEEEEETT
T ss_pred CceeEEccccc-CCCceeEEEeCCCCCEEEEEeCCCeEEEEEcC
Confidence 88766553321 1235556776666 58889999999999974
No 134
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.34 E-value=0.17 Score=51.45 Aligned_cols=186 Identities=8% Similarity=-0.056 Sum_probs=108.1
Q ss_pred eEEecCCeEEEEE-CCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEcCCe-EEEEEcCCeEEEEeCC-Cc
Q 006913 83 PVHGGTGEVYIVA-ENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSS-VYINVKGRALFAFMTH-GQ 159 (626)
Q Consensus 83 p~iD~dG~IwVgT-~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~-LwIgT~~gGL~a~d~~-G~ 159 (626)
.....++.+..++ ++.|..+|..++.. ...+. ...+ .+..+....++. +..|+.++.+..+|.. +.
T Consensus 149 ~~~~~~~~l~s~s~d~~i~~wd~~~~~~-----~~~~~-----~h~~-~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~ 217 (340)
T 1got_B 149 CRFLDDNQIVTSSGDTTCALWDIETGQQ-----TTTFT-----GHTG-DVMSLSLAPDTRLFVSGACDASAKLWDVREGM 217 (340)
T ss_dssp EEEEETTEEEEEETTSCEEEEETTTTEE-----EEEEC-----CCSS-CEEEEEECTTSSEEEEEETTSCEEEEETTTCS
T ss_pred EEECCCCcEEEEECCCcEEEEECCCCcE-----EEEEc-----CCCC-ceEEEEECCCCCEEEEEeCCCcEEEEECCCCe
Confidence 3334567777776 78888889877531 11221 1112 344444444554 5566777888889974 66
Q ss_pred EEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcCCCeEEEEeCCCCeEEEEEcCCC-CCcceeeeeecC
Q 006913 160 LLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSS-FDKAFTLTPGNN 238 (626)
Q Consensus 160 ~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s-~~~v~sI~~D~d 238 (626)
....+.. + ... ..++...+.+..|..|+.++.|..+|.++++......... ...+.++....+
T Consensus 218 ~~~~~~~------------h---~~~-v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~ 281 (340)
T 1got_B 218 CRQTFTG------------H---ESD-INAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKS 281 (340)
T ss_dssp EEEEECC------------C---SSC-EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTT
T ss_pred eEEEEcC------------C---cCC-EEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCC
Confidence 6544310 0 011 1334444424557778888889999998877655433221 223566667778
Q ss_pred CeEEEEEcCCCEEEEEECCCCcEEEEEecCCCCCceeeEEEeeCCe-EEEEEcCCeEEEE
Q 006913 239 GYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPVVDSNGW-ISVGSLDGLLYSF 297 (626)
Q Consensus 239 G~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~~~sspvvD~dG~-IWVGT~~gGLy~~ 297 (626)
|.+.+....++.+..+|..++......... ...+.++...++|. |..|+.++.|..+
T Consensus 282 g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h--~~~v~~~~~s~dg~~l~s~s~D~~i~iW 339 (340)
T 1got_B 282 GRLLLAGYDDFNCNVWDALKADRAGVLAGH--DNRVSCLGVTDDGMAVATGSWDSFLKIW 339 (340)
T ss_dssp SSEEEEEETTSEEEEEETTTCCEEEEEECC--SSCEEEEEECTTSSCEEEEETTSCEEEE
T ss_pred CCEEEEECCCCeEEEEEcccCcEeeEeecC--CCcEEEEEEcCCCCEEEEEcCCccEEec
Confidence 865555445678888998888766443222 12344566665664 6667767666655
No 135
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=97.34 E-value=0.16 Score=50.91 Aligned_cols=236 Identities=7% Similarity=-0.086 Sum_probs=122.4
Q ss_pred eeeeEEeeCCEE-EEEe-CCcEEEEcC-CCCEEEEEeCCCCCCcccCeEEecCCeEEEE-E-C-----CeEEEEECCCCc
Q 006913 39 LSKPLIGEDGKI-YACS-EKTLFAFES-NGTIAWSLDLDFTCNIGTAPVHGGTGEVYIV-A-E-----NRVLKVDLLKIG 108 (626)
Q Consensus 39 ~Sspvid~dG~I-wIgS-dggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~dG~IwVg-T-~-----ggL~~id~~~~~ 108 (626)
...+....+|.. ..++ ++.+..+|. +++....+... ..+.++....++...+. . + +.|..++.....
T Consensus 77 v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~ 153 (369)
T 3zwl_B 77 IWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWKSP---VPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDS 153 (369)
T ss_dssp EEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECS---SCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECT
T ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecC---CCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCc
Confidence 344455455654 4455 567888887 77776555432 23345556667765554 3 4 677777765432
Q ss_pred cccceeEEEecCCCC---CCCC-CCeeEEEEEEcC-CeEEEEEcCCeEEEEeCC--CcEEEEECCcccccccccccccCC
Q 006913 109 TSESATQVFYGTGSG---KGGT-GAIAGIAVSTSS-SSVYINVKGRALFAFMTH--GQLLWSAGPVLDQLGYRQGCTKTD 181 (626)
Q Consensus 109 ~~~~~~~~~~~~~~~---~~~~-~~~I~s~~~d~d-G~LwIgT~~gGL~a~d~~--G~~~w~~~~~~~~~~~~~~~~~~l 181 (626)
.... ......... .... ...+..+....+ ..|.+++.++.|..+|.. ++....... .
T Consensus 154 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~------------~-- 217 (369)
T 3zwl_B 154 ATHE--LTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDL------------H-- 217 (369)
T ss_dssp TTCC--EEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEEC------------C--
T ss_pred ccee--ecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEec------------C--
Confidence 1000 000000000 0000 113333333334 457777878889999974 444433200 0
Q ss_pred CCCccccceEEEcCCCeEEEEcCCCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCC-eEEEEEcCCC-----------
Q 006913 182 VDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNG-YLYVTIPVRA----------- 249 (626)
Q Consensus 182 ~~~~i~sspviD~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG-~LwVGT~~gG----------- 249 (626)
... ...+...+.+..|+.++.++.|..+|.++++........ ..+..+....++ .++++...++
T Consensus 218 -~~~-v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 293 (369)
T 3zwl_B 218 -EKS-ISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETD--CPLNTAVITPLKEFIILGGGQEAKDVTTTSANEG 293 (369)
T ss_dssp -SSC-EEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECS--SCEEEEEECSSSSEEEEEECCC------------
T ss_pred -CCc-eeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecCC--CCceeEEecCCCceEEEeecCCCceEEEEecCCC
Confidence 011 133444432455778888899999999998776654422 223444555555 4555543221
Q ss_pred --EEEEEECCCCcEEEEEecCCCCCceeeEEEeeCCe-EEEEEcCCeEEEEcC
Q 006913 250 --LVLALDTSSGNILWHKSVGPLGSAEYAPVVDSNGW-ISVGSLDGLLYSFSP 299 (626)
Q Consensus 250 --~l~alD~~tG~~~w~~~~~~l~~~~sspvvD~dG~-IWVGT~~gGLy~~d~ 299 (626)
.+..+|..+++........ ...+.++...++|. |..|+.++.|..++.
T Consensus 294 ~~~i~~~d~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~ 344 (369)
T 3zwl_B 294 KFEARFYHKIFEEEIGRVQGH--FGPLNTVAISPQGTSYASGGEDGFIRLHHF 344 (369)
T ss_dssp -CEEEEEETTTCCEEEEEECC--SSCEEEEEECTTSSEEEEEETTSEEEEEEE
T ss_pred cceeEEEecCCCcchhheecc--cCcEEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 4666676666665443322 12244455655554 555566666666654
No 136
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.34 E-value=0.098 Score=60.99 Aligned_cols=197 Identities=10% Similarity=0.083 Sum_probs=113.6
Q ss_pred eeeeEEee-CCEEEEEe--CCcEEEEcCCCCE---EEEEeCCCCCCcccCeEEecC-CeEEEEE--CCeEEEEECCCCcc
Q 006913 39 LSKPLIGE-DGKIYACS--EKTLFAFESNGTI---AWSLDLDFTCNIGTAPVHGGT-GEVYIVA--ENRVLKVDLLKIGT 109 (626)
Q Consensus 39 ~Sspvid~-dG~IwIgS--dggL~a~d~~G~~---~W~~~~~~~~~i~~sp~iD~d-G~IwVgT--~ggL~~id~~~~~~ 109 (626)
...+.++. ++.||+.. .+.|++++.+|.. ...............+.+|.. ++||++. .+.|.+++.++..
T Consensus 426 ~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~- 504 (791)
T 3m0c_C 426 VVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK- 504 (791)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSS-
T ss_pred eEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCe-
Confidence 34445554 67888876 4568888875421 011111111112345778854 5899986 5789999987642
Q ss_pred ccceeEEEecCCCCCCCCCCeeEEEEEE-cCCeEEEEEcC--CeEEEEeCCCcEEEEECCcccccccccccccCCCCCcc
Q 006913 110 SESATQVFYGTGSGKGGTGAIAGIAVST-SSSSVYINVKG--RALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYF 186 (626)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~I~s~~~d-~dG~LwIgT~~--gGL~a~d~~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i 186 (626)
........ .... ..++.+ ..|.||+...+ +.|.+++++|..+-.... ..+ ..
T Consensus 505 ----~~~l~~~~-----l~~P-~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~------------~~l---~~ 559 (791)
T 3m0c_C 505 ----RKTLFREN-----GSKP-RAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT------------ENI---QW 559 (791)
T ss_dssp ----EEEEEECT-----TCCE-EEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEEC------------SSC---SC
T ss_pred ----EEEEEeCC-----CCCc-ceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEe------------CCC---CC
Confidence 12222111 0112 334445 56899998754 468888888765432200 000 01
Q ss_pred ccceEEEcCCCeEEEEcC-CCeEEEEeCCCCeEEEEEcCC-CCCcceeeeeecCCeEEEEEcCCCEEEEEECCCCcEE
Q 006913 187 TSVPVIDQCEGSIYISNT-QGELYSLSAHSPYFNWIQDLS-SFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNIL 262 (626)
Q Consensus 187 ~sspviD~~dG~LwIGT~-~GgL~~ld~~tg~~~w~~~~~-s~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~tG~~~ 262 (626)
...+++|..++.||++.. .+.|.+++.++....-..... ......+++++ +++||++......|..+|+.+|+.+
T Consensus 560 P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~-~~~lYwtD~~~~~I~~~dk~tG~~~ 636 (791)
T 3m0c_C 560 PNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDV 636 (791)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCCC
T ss_pred ceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEe-CCEEEEEECCCCEEEEEeCCCCcce
Confidence 234677844789998865 457999999876544333221 23344566665 5689998877788999998888654
No 137
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.33 E-value=0.045 Score=60.33 Aligned_cols=246 Identities=13% Similarity=0.137 Sum_probs=130.2
Q ss_pred eeeeEEe--eCCEEEEEeC--CcEEEEcCCC-CEEEEEeCCCC-CCcccCeEE-------ecCCe-EEEEECC-------
Q 006913 39 LSKPLIG--EDGKIYACSE--KTLFAFESNG-TIAWSLDLDFT-CNIGTAPVH-------GGTGE-VYIVAEN------- 97 (626)
Q Consensus 39 ~Sspvid--~dG~IwIgSd--ggL~a~d~~G-~~~W~~~~~~~-~~i~~sp~i-------D~dG~-IwVgT~g------- 97 (626)
...+.+| .+++||++.. +.|.++|..+ .+.-....... ......+.+ |.+|. ||++..+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~ 220 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDES 220 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccC
Confidence 3456777 4689999974 4788999844 44321222110 112345667 88887 9988732
Q ss_pred -eEEEEECCC-Ccccc-ce-eEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEcCCe-EEEEeCC-------CcEEEEEC
Q 006913 98 -RVLKVDLLK-IGTSE-SA-TQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRA-LFAFMTH-------GQLLWSAG 165 (626)
Q Consensus 98 -gL~~id~~~-~~~~~-~~-~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~~gG-L~a~d~~-------G~~~w~~~ 165 (626)
.++.++... +.+.+ .. ..+. . .. ...+..+...++.||++...++ |+++|++ +...|...
T Consensus 221 ~~V~~i~r~~~G~~~~~~~~~~v~--~--~~----~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~ 292 (496)
T 3kya_A 221 PSVYIIKRNADGTFDDRSDIQLIA--A--YK----QCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPI 292 (496)
T ss_dssp EEEEEEECCTTSCCSTTSCEEEEE--E--ES----CCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCB
T ss_pred ceEEEEecCCCCceeecccceeec--c--CC----CceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccc
Confidence 388887554 22211 00 0110 0 00 1122222233789999887655 9999975 33333210
Q ss_pred Cc-----ccccccccccccCCCCCccccceEEEcCCCe-EEEEcC-CCeEEEEeCC--CCeE----EEEEcCC--C----
Q 006913 166 PV-----LDQLGYRQGCTKTDVDCYFTSVPVIDQCEGS-IYISNT-QGELYSLSAH--SPYF----NWIQDLS--S---- 226 (626)
Q Consensus 166 ~~-----~~~~~~~~~~~~~l~~~~i~sspviD~~dG~-LwIGT~-~GgL~~ld~~--tg~~----~w~~~~~--s---- 226 (626)
.. ...+ +.. ........+++++ +|+ |||+.. ++.|++++.+ ++.+ .+.-..+ +
T Consensus 293 ~~~~~g~~~~l-~~~------~~~~~p~~ia~~p-~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG 364 (496)
T 3kya_A 293 VKNNPNTFKQL-FTI------ADPSWEFQIFIHP-TGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDD 364 (496)
T ss_dssp GGGCTTTEEEE-EEC------SSSSCCEEEEECT-TSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCC
T ss_pred cccccccccee-Eec------CCCCCceEEEEcC-CCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCC
Confidence 00 0000 000 0011123467786 666 899865 5678886554 3332 2221111 0
Q ss_pred ------CCcce-eeeee-------cCCeEEEEEcCCCEEEEEECCCCcEEEEEec------------CC-CC--------
Q 006913 227 ------FDKAF-TLTPG-------NNGYLYVTIPVRALVLALDTSSGNILWHKSV------------GP-LG-------- 271 (626)
Q Consensus 227 ------~~~v~-sI~~D-------~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~------------~~-l~-------- 271 (626)
+.... .++.+ .+|.|||+...+..+..++ .+|.+...... +. .+
T Consensus 365 ~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f 443 (496)
T 3kya_A 365 VGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGIVSTYAGRGASTSLADGNQWGTDDGDLREVARF 443 (496)
T ss_dssp BGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCBEEEEEESCTTHHHHHSCSCCCCCEETTTTCCC
T ss_pred cccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEe-CCCCEEEEecccccccccCccccccCCCCchhhhhc
Confidence 12233 35565 5789999987778999998 57866543221 10 00
Q ss_pred CceeeEEEeeC-CeEEEEEc-CCeEEEEcCCC
Q 006913 272 SAEYAPVVDSN-GWISVGSL-DGLLYSFSPSG 301 (626)
Q Consensus 272 ~~~sspvvD~d-G~IWVGT~-~gGLy~~d~~g 301 (626)
.....+++|++ |+|||+.. +..|.+++.++
T Consensus 444 ~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~ 475 (496)
T 3kya_A 444 RDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQ 475 (496)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEECC
T ss_pred CCCcEEEEECCCCEEEEEeCCCCEEEEEECCC
Confidence 11345678875 89999874 34666665543
No 138
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.33 E-value=0.014 Score=59.15 Aligned_cols=111 Identities=19% Similarity=0.117 Sum_probs=78.8
Q ss_pred eEEEcCCCeEEEEcC-CCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCCeEEEEEcCCCEEEEEECCCCcEEEEEecC
Q 006913 190 PVIDQCEGSIYISNT-QGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVG 268 (626)
Q Consensus 190 pviD~~dG~LwIGT~-~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~ 268 (626)
+.++ ++.||+++. +|.|..+|+++|++.-.. .+.......+..+ +++||+.+...+.++.+|+.+++.+-++...
T Consensus 60 L~~~--~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~-g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~ 135 (268)
T 3nok_A 60 LVFH--QGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASD-GERLYQLTWTEGLLFTWSGMPPQRERTTRYS 135 (268)
T ss_dssp EEEE--TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEEC-SSCEEEEESSSCEEEEEETTTTEEEEEEECS
T ss_pred EEEE--CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEe-CCEEEEEEccCCEEEEEECCcCcEEEEEeCC
Confidence 4455 789999987 457999999999886654 3321111234554 5699999987889999999999988776654
Q ss_pred CCCCceeeEEEeeCCeEEEEEcCCeEEEEcCC-CCEEEEee
Q 006913 269 PLGSAEYAPVVDSNGWISVGSLDGLLYSFSPS-GVLNKFSK 308 (626)
Q Consensus 269 ~l~~~~sspvvD~dG~IWVGT~~gGLy~~d~~-g~~~~~~~ 308 (626)
+-+ ..++.| .+++|+....+.|+.+|+. .+......
T Consensus 136 ~eG---wGLt~D-g~~L~vSdGs~~l~~iDp~T~~v~~~I~ 172 (268)
T 3nok_A 136 GEG---WGLCYW-NGKLVRSDGGTMLTFHEPDGFALVGAVQ 172 (268)
T ss_dssp SCC---CCEEEE-TTEEEEECSSSEEEEECTTTCCEEEEEE
T ss_pred Cce---eEEecC-CCEEEEECCCCEEEEEcCCCCeEEEEEE
Confidence 311 234455 6789999878899999986 56554433
No 139
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=97.31 E-value=0.21 Score=51.59 Aligned_cols=196 Identities=13% Similarity=0.018 Sum_probs=108.1
Q ss_pred CeEEecCCeEEEEE-CCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEcCC-eEEEEEcCCeEEEEeCC-C
Q 006913 82 APVHGGTGEVYIVA-ENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSS-SVYINVKGRALFAFMTH-G 158 (626)
Q Consensus 82 sp~iD~dG~IwVgT-~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG-~LwIgT~~gGL~a~d~~-G 158 (626)
++....++.+..++ ++.|...|..++..... ...... .+ ...|..+....+| .|..|+.++-|..+|.. +
T Consensus 87 ~~~~s~d~~l~~~s~dg~v~lWd~~~~~~~~~-~~~~~~-----~H-~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~ 159 (344)
T 4gqb_B 87 DLTWVGERGILVASDSGAVELWELDENETLIV-SKFCKY-----EH-DDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQ 159 (344)
T ss_dssp EEEEETTTEEEEEETTSEEEEEEECTTSSCEE-EEEEEE-----CC-SSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred EEEEeCCCeEEEEECCCEEEEEeccCCCceeE-eecccc-----CC-CCCEEEEEECCCCCEEEEEeCCCeEEEEECCCC
Confidence 44455778888777 67788888776532100 011100 11 1234444444455 46667777788899975 7
Q ss_pred cEEEEECCcccccccccccccCCCCCccccceEEEcCCCe-EEEEcCCCeEEEEeCCCCeEEEEEcCCC-CCcceeeeee
Q 006913 159 QLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGS-IYISNTQGELYSLSAHSPYFNWIQDLSS-FDKAFTLTPG 236 (626)
Q Consensus 159 ~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~-LwIGT~~GgL~~ld~~tg~~~w~~~~~s-~~~v~sI~~D 236 (626)
+.+..+.. +. ..+ .+......+.. +..|..++.|..+|.++++......... ...+.++...
T Consensus 160 ~~~~~~~~------------h~---~~V-~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (344)
T 4gqb_B 160 VVLSSYRA------------HA---AQV-TCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWH 223 (344)
T ss_dssp EEEEEECC------------CS---SCE-EEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEEC
T ss_pred cEEEEEcC------------cC---Cce-EEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeec
Confidence 66554310 00 111 23333321333 4556678889999998877654322111 1223444443
Q ss_pred c-CCeEEE-EEcCCCEEEEEECCCCcEEEEEecCCCCCceeeEEEeeCC--eEEEEEcCCeEEEEcCC-CCE
Q 006913 237 N-NGYLYV-TIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPVVDSNG--WISVGSLDGLLYSFSPS-GVL 303 (626)
Q Consensus 237 ~-dG~LwV-GT~~gG~l~alD~~tG~~~w~~~~~~l~~~~sspvvD~dG--~IWVGT~~gGLy~~d~~-g~~ 303 (626)
. ++++.+ |+ .++.+..+|..+++.+...... ...+.++...++| .|..|+.++.|..+|.. ++.
T Consensus 224 p~~~~~l~sg~-~dg~v~~wd~~~~~~~~~~~~h--~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~ 292 (344)
T 4gqb_B 224 PQQSEVFVFGD-ENGTVSLVDTKSTSCVLSSAVH--SQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSEL 292 (344)
T ss_dssp SSCTTEEEEEE-TTSEEEEEESCC--CCEEEECC--SSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEE
T ss_pred CCCCcceEEec-cCCcEEEEECCCCcEEEEEcCC--CCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcE
Confidence 3 445554 55 4578888998888776554322 1234556666665 36668888999999976 443
No 140
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.25 E-value=0.026 Score=57.20 Aligned_cols=112 Identities=14% Similarity=0.108 Sum_probs=79.3
Q ss_pred eEEEcCCCeEEEEcC---CCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCCeEEEEEcCCCEEEEEECCCCcEEEEEe
Q 006913 190 PVIDQCEGSIYISNT---QGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKS 266 (626)
Q Consensus 190 pviD~~dG~LwIGT~---~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~tG~~~w~~~ 266 (626)
+.++. ++.||+++. .+.|..+|..++++.-..+.+.......++.+ +++||+++...+.+..+|+.+++.+....
T Consensus 26 l~~~~-dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~-g~~lyv~t~~~~~v~viD~~t~~v~~~i~ 103 (266)
T 2iwa_A 26 LVYAE-NDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL-NEKLYQVVWLKNIGFIYDRRTLSNIKNFT 103 (266)
T ss_dssp EEECS-TTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE-TTEEEEEETTCSEEEEEETTTTEEEEEEE
T ss_pred EEEeC-CCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe-CCEEEEEEecCCEEEEEECCCCcEEEEEE
Confidence 45564 589999874 46899999999998776554432222334555 56999999878899999999998887766
Q ss_pred cC-CCCCceeeEEEeeCCeEEEEEcCCeEEEEcCC-CCEEEEe
Q 006913 267 VG-PLGSAEYAPVVDSNGWISVGSLDGLLYSFSPS-GVLNKFS 307 (626)
Q Consensus 267 ~~-~l~~~~sspvvD~dG~IWVGT~~gGLy~~d~~-g~~~~~~ 307 (626)
.+ +-+ ..+..| .+++|++..++.|+.+|+. .+.....
T Consensus 104 ~g~~~g---~glt~D-g~~l~vs~gs~~l~viD~~t~~v~~~I 142 (266)
T 2iwa_A 104 HQMKDG---WGLATD-GKILYGSDGTSILYEIDPHTFKLIKKH 142 (266)
T ss_dssp CCSSSC---CEEEEC-SSSEEEECSSSEEEEECTTTCCEEEEE
T ss_pred CCCCCe---EEEEEC-CCEEEEECCCCeEEEEECCCCcEEEEE
Confidence 55 311 223344 5789998877899999986 4554443
No 141
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=97.21 E-value=0.083 Score=54.63 Aligned_cols=199 Identities=9% Similarity=-0.045 Sum_probs=104.3
Q ss_pred cCeEEecCCeEEEEE-CCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEcCC-eEEEEEcCCeEEEEeCC-
Q 006913 81 TAPVHGGTGEVYIVA-ENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSS-SVYINVKGRALFAFMTH- 157 (626)
Q Consensus 81 ~sp~iD~dG~IwVgT-~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG-~LwIgT~~gGL~a~d~~- 157 (626)
.++....++.+.+++ ++.|...|..++..... ..... ... ...|..+....+| .|..++.++-|..+|..
T Consensus 98 ~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~~~~-~~~~~-----~~h-~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~ 170 (357)
T 4g56_B 98 TDVAWVSEKGILVASDSGAVELWEILEKESLLV-NKFAK-----YEH-DDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQ 170 (357)
T ss_dssp EEEEEETTTEEEEEETTSCEEEC--------CC-CCEEE-----CCC-SSCEEEEEECSSSSEEEEEETTSCEEEEETTT
T ss_pred EEEEEcCCCCEEEEECCCEEEEeeccccceeEE-Eeecc-----CCC-CCCEEEEEECCCCCEEEEEeCCCeEEEEECCC
Confidence 345556788888877 67777777655421000 00000 011 2234444444455 46667777888899975
Q ss_pred CcEEEEECCcccccccccccccCCCCCccccceEEEcC-CCeEEEEcCCCeEEEEeCCCCeEEEEEcCC-CCCcceeeee
Q 006913 158 GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQC-EGSIYISNTQGELYSLSAHSPYFNWIQDLS-SFDKAFTLTP 235 (626)
Q Consensus 158 G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~-dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~-s~~~v~sI~~ 235 (626)
++.+..+.. + ...+ .++..... +..+..+..++.|..+|.++++........ ....+.++..
T Consensus 171 ~~~~~~~~~------------h---~~~v-~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~ 234 (357)
T 4g56_B 171 KAVLKSYNA------------H---SSEV-NCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTW 234 (357)
T ss_dssp TEEEEEECC------------C---SSCE-EEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEE
T ss_pred CcEEEEEcC------------C---CCCE-EEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhh
Confidence 766554310 0 0111 22333221 234566667888888898877543322211 1122444544
Q ss_pred ecC-Ce-EEEEEcCCCEEEEEECCCCcEEEEEecCCCCCceeeEEEeeCC--eEEEEEcCCeEEEEcCC-CCEEE
Q 006913 236 GNN-GY-LYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPVVDSNG--WISVGSLDGLLYSFSPS-GVLNK 305 (626)
Q Consensus 236 D~d-G~-LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~~~sspvvD~dG--~IWVGT~~gGLy~~d~~-g~~~~ 305 (626)
..+ +. |..|+ ..+.+..+|..+++........ ...+.++...+++ .|..|+.++.|..+|.. ++...
T Consensus 235 sp~~~~~la~g~-~d~~i~~wd~~~~~~~~~~~~~--~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~ 306 (357)
T 4g56_B 235 HPEKDDTFACGD-ETGNVSLVNIKNPDSAQTSAVH--SQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFR 306 (357)
T ss_dssp CTTSTTEEEEEE-SSSCEEEEESSCGGGCEEECCC--SSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEE
T ss_pred hhcccceEEEee-cccceeEEECCCCcEeEEEecc--ceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeE
Confidence 333 34 44555 4567888898888765444322 1234556665555 35567888999999975 54443
No 142
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.21 E-value=0.085 Score=54.39 Aligned_cols=187 Identities=12% Similarity=0.008 Sum_probs=108.2
Q ss_pred CCeEEEEE--CCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEE-cCCeEEEEEc-CCeEEEEeCCCcEEEE
Q 006913 88 TGEVYIVA--ENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVST-SSSSVYINVK-GRALFAFMTHGQLLWS 163 (626)
Q Consensus 88 dG~IwVgT--~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d-~dG~LwIgT~-~gGL~a~d~~G~~~w~ 163 (626)
++.||+.. .+.|+++++++... ........ .... ..+..+ .+++||+... .+.|..++++|...-.
T Consensus 46 ~~~lyw~D~~~~~I~r~~~~g~~~----~~~~~~~~-----l~~p-~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~ 115 (318)
T 3sov_A 46 HGLIYWSDVSEEAIKRTEFNKTES----VQNVVVSG-----LLSP-DGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKV 115 (318)
T ss_dssp GTEEEEEETTTTEEEEEETTSSSC----CCEEEEEC-----CSCC-CEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred CCEEEEEECCCCcEEEEEccCCCc----eEEEEcCC-----CCCc-cEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEE
Confidence 57888886 57899999876421 01111100 0111 223445 5889998754 4678888987643222
Q ss_pred ECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcC--CCeEEEEeCCCCeEEEEEcCCCCCcceeeeeec-CCe
Q 006913 164 AGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNT--QGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGN-NGY 240 (626)
Q Consensus 164 ~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~--~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~-dG~ 240 (626)
... ..+ .....+++|..+|.||+... .+.|++++.++......... .......++.|. +++
T Consensus 116 l~~------------~~~---~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~-~l~~Pnglavd~~~~~ 179 (318)
T 3sov_A 116 LFW------------QEL---DQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINS-EIYWPNGLTLDYEEQK 179 (318)
T ss_dssp EEC------------SSC---SSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECS-SCSCEEEEEEETTTTE
T ss_pred EEe------------CCC---CCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEEC-CCCCccEEEEeccCCE
Confidence 100 000 01234677854789999874 47899999987543322221 223345678885 789
Q ss_pred EEEEEcCCCEEEEEECCCCcEEEEEecCCCCCceeeEEEeeCCeEEEEE-cCCeEEEEcC-CCCE
Q 006913 241 LYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPVVDSNGWISVGS-LDGLLYSFSP-SGVL 303 (626)
Q Consensus 241 LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~~~sspvvD~dG~IWVGT-~~gGLy~~d~-~g~~ 303 (626)
||++......+..+|.. |..........+ .....+.++ .+.+|+.. .++.|+++++ +|+.
T Consensus 180 lY~aD~~~~~I~~~d~d-G~~~~~~~~~~~-~~P~glav~-~~~lywtd~~~~~V~~~~~~~G~~ 241 (318)
T 3sov_A 180 LYWADAKLNFIHKSNLD-GTNRQAVVKGSL-PHPFALTLF-EDILYWTDWSTHSILACNKYTGEG 241 (318)
T ss_dssp EEEEETTTTEEEEEETT-SCSCEEEECSCC-SCEEEEEEE-TTEEEEEETTTTEEEEEETTTCCS
T ss_pred EEEEECCCCEEEEEcCC-CCceEEEecCCC-CCceEEEEe-CCEEEEEecCCCeEEEEECCCCCc
Confidence 99998777889999864 332222211111 123456677 45666654 4578999997 4653
No 143
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=97.18 E-value=0.26 Score=50.34 Aligned_cols=159 Identities=7% Similarity=-0.035 Sum_probs=90.6
Q ss_pred eEEEEEEcCCeEEEEEcCCeEEEEeCC-CcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcCC---C
Q 006913 131 AGIAVSTSSSSVYINVKGRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQ---G 206 (626)
Q Consensus 131 I~s~~~d~dG~LwIgT~~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~~---G 206 (626)
+..+....++.+.+++.++.|..+|.. ++.+..+.. .. .+...... ..++...+.+..|..++.+ +
T Consensus 189 i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-------~~--~h~~~~~~-i~~i~~~~~~~~l~~~~~d~~~g 258 (397)
T 1sq9_A 189 ATSVDISERGLIATGFNNGTVQISELSTLRPLYNFES-------QH--SMINNSNS-IRSVKFSPQGSLLAIAHDSNSFG 258 (397)
T ss_dssp CCEEEECTTSEEEEECTTSEEEEEETTTTEEEEEEEC-------CC-----CCCCC-EEEEEECSSTTEEEEEEEETTEE
T ss_pred ceEEEECCCceEEEEeCCCcEEEEECCCCceeEEEec-------cc--cccccCCc-cceEEECCCCCEEEEEecCCCCc
Confidence 334444445566667777889999975 766554310 00 00000011 1334444324557777777 8
Q ss_pred eEEEEeCCCCeEEEEEcCC------------CCCcceeeeeecCCeEEEEEcCCCEEEEEECCCCcEEEEEecC----CC
Q 006913 207 ELYSLSAHSPYFNWIQDLS------------SFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVG----PL 270 (626)
Q Consensus 207 gL~~ld~~tg~~~w~~~~~------------s~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~----~l 270 (626)
.|..+|.++++........ ....+.++....+|.+.+....++.+..+|..+++........ ..
T Consensus 259 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 338 (397)
T 1sq9_A 259 CITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEI 338 (397)
T ss_dssp EEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSS
T ss_pred eEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccc
Confidence 8999999888766544320 1123556666666654443335678999999888877665410 00
Q ss_pred ---------------CCceeeEEEeeCC-----------eEEEEEcCCeEEEEcC
Q 006913 271 ---------------GSAEYAPVVDSNG-----------WISVGSLDGLLYSFSP 299 (626)
Q Consensus 271 ---------------~~~~sspvvD~dG-----------~IWVGT~~gGLy~~d~ 299 (626)
...+..+...++| .|..|+.++.|..++.
T Consensus 339 ~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~ 393 (397)
T 1sq9_A 339 EEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFRE 393 (397)
T ss_dssp GGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEE
T ss_pred hhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEc
Confidence 1234556666665 5666777777776653
No 144
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.18 E-value=0.24 Score=49.90 Aligned_cols=201 Identities=7% Similarity=-0.080 Sum_probs=108.4
Q ss_pred ccCeEEecCCeEEE-EE-CCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEcC-CeEEEEEcCCeEEEEeC
Q 006913 80 GTAPVHGGTGEVYI-VA-ENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSS-SSVYINVKGRALFAFMT 156 (626)
Q Consensus 80 ~~sp~iD~dG~IwV-gT-~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~d-G~LwIgT~~gGL~a~d~ 156 (626)
+.++....+|++.+ ++ ++.|..++..++.. .....+. .. ...+..+....+ ..|..++.++.|..+|.
T Consensus 11 i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~---~~~~~~~-----~h-~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~ 81 (372)
T 1k8k_C 11 ISCHAWNKDRTQIAICPNNHEVHIYEKSGNKW---VQVHELK-----EH-NGQVTGVDWAPDSNRIVTCGTDRNAYVWTL 81 (372)
T ss_dssp CCEEEECTTSSEEEEECSSSEEEEEEEETTEE---EEEEEEE-----CC-SSCEEEEEEETTTTEEEEEETTSCEEEEEE
T ss_pred eEEEEECCCCCEEEEEeCCCEEEEEeCCCCcE---Eeeeeec-----CC-CCcccEEEEeCCCCEEEEEcCCCeEEEEEC
Confidence 34555666776544 43 67888888776521 0011111 11 123444444444 45666777777888886
Q ss_pred C-CcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcCCCeEEEEeCCCCeEEEE---EcCCCCCccee
Q 006913 157 H-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWI---QDLSSFDKAFT 232 (626)
Q Consensus 157 ~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~~GgL~~ld~~tg~~~w~---~~~~s~~~v~s 232 (626)
. ++....... .. . ... ..++...+.+..|..++.++.|..+|.+++...+. ........+.+
T Consensus 82 ~~~~~~~~~~~----~~------~---~~~-v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~ 147 (372)
T 1k8k_C 82 KGRTWKPTLVI----LR------I---NRA-ARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLS 147 (372)
T ss_dssp ETTEEEEEEEC----CC------C---SSC-EEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEE
T ss_pred CCCeeeeeEEe----ec------C---CCc-eeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeE
Confidence 4 543322100 00 0 011 13344443245677888888888877776653221 11111234566
Q ss_pred eeeecCCe-EEEEEcCCCEEEEEEC------------------CCCcEEEEEecCCCCCceeeEEEeeCC-eEEEEEcCC
Q 006913 233 LTPGNNGY-LYVTIPVRALVLALDT------------------SSGNILWHKSVGPLGSAEYAPVVDSNG-WISVGSLDG 292 (626)
Q Consensus 233 I~~D~dG~-LwVGT~~gG~l~alD~------------------~tG~~~w~~~~~~l~~~~sspvvD~dG-~IWVGT~~g 292 (626)
+....++. |.+++ ..+.+..+|. .++......... ...+.++...+++ .|+.|+.++
T Consensus 148 ~~~~~~~~~l~~~~-~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d~ 224 (372)
T 1k8k_C 148 LDWHPNSVLLAAGS-CDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSS--CGWVHGVCFSANGSRVAWVSHDS 224 (372)
T ss_dssp EEECTTSSEEEEEE-TTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCC--SSCEEEEEECSSSSEEEEEETTT
T ss_pred EEEcCCCCEEEEEc-CCCCEEEEEcccccccccccccccccccchhhheEecCCC--CCeEEEEEECCCCCEEEEEeCCC
Confidence 66666675 55555 4567777883 355555443211 1234556666565 688888899
Q ss_pred eEEEEcCC-CCEEEE
Q 006913 293 LLYSFSPS-GVLNKF 306 (626)
Q Consensus 293 GLy~~d~~-g~~~~~ 306 (626)
.|..+|.. ++....
T Consensus 225 ~i~i~d~~~~~~~~~ 239 (372)
T 1k8k_C 225 TVCLADADKKMAVAT 239 (372)
T ss_dssp EEEEEEGGGTTEEEE
T ss_pred EEEEEECCCCceeEE
Confidence 99999974 655443
No 145
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=97.15 E-value=0.41 Score=51.86 Aligned_cols=260 Identities=12% Similarity=0.025 Sum_probs=137.1
Q ss_pred EEeeCCEEEE-Ee-CCcEEEEcCCCCEEEEEeCCCCCCcccCeEEecCCeEEE-EE-CCeEEEEECCCCccccceeEEEe
Q 006913 43 LIGEDGKIYA-CS-EKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYI-VA-ENRVLKVDLLKIGTSESATQVFY 118 (626)
Q Consensus 43 vid~dG~IwI-gS-dggL~a~d~~G~~~W~~~~~~~~~i~~sp~iD~dG~IwV-gT-~ggL~~id~~~~~~~~~~~~~~~ 118 (626)
....+|...+ ++ ++.+..++.+++...... ... ..+.++....++...+ ++ ++.|...|..+.. .. .+
T Consensus 269 ~~~~d~~~l~~~~~d~~i~~w~~~~~~~~~~~-~h~-~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~-----~~-~~ 340 (577)
T 2ymu_A 269 AFRPDGQTIASASDDKTVKLWNRNGQLLQTLT-GHS-SSVWGVAFSPDGQTIASASDDKTVKLWNRNGQH-----LQ-TL 340 (577)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTSCEEEEEC-CCS-SCEEEEEECTTSSEEEEEETTSCEEEEETTSCE-----EE-EE
T ss_pred EEcCCCCEEEEEeCCCEEEEEeCCCcEEEEEe-cCC-CCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCe-----eE-EE
Confidence 3334554443 44 456777777766543332 111 2233455566776554 44 5677777876542 11 11
Q ss_pred cCCCCCCCCCCeeEEEEEEcCC-eEEEEEcCCeEEEEeCCCcEEEEECCcccccccccccccCCCCCccccceEEEcCCC
Q 006913 119 GTGSGKGGTGAIAGIAVSTSSS-SVYINVKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEG 197 (626)
Q Consensus 119 ~~~~~~~~~~~~I~s~~~d~dG-~LwIgT~~gGL~a~d~~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG 197 (626)
. .. ...+..+....+| .|..++.++.+..++.+++....... + ...+ .++.+.+.+.
T Consensus 341 ~-----~~-~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~~~~~~~~~------------~---~~~v-~~~~~s~dg~ 398 (577)
T 2ymu_A 341 T-----GH-SSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTG------------H---SSSV-RGVAFSPDGQ 398 (577)
T ss_dssp C-----CC-SSCEEEEEECTTSSEEEEEETTSEEEEEETTCCEEEEEEC------------C---SSCE-EEEEECTTSS
T ss_pred e-----CC-CCCEEEEEECCCCCEEEEEeCCCEEEEEcCCCCEEEEecC------------C---CCCe-EEEEECCCCC
Confidence 1 11 1233444444454 45666777777788887776544300 0 0111 3344544234
Q ss_pred eEEEEcCCCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCCeEEEEEcCCCEEEEEECCCCcEEEEEecCCCCCceeeE
Q 006913 198 SIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAP 277 (626)
Q Consensus 198 ~LwIGT~~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~~~ssp 277 (626)
.|..+..++.|..+|.++ +....... ....+.++....|+.+.+....++.+..+|. +++........ ...+.++
T Consensus 399 ~l~~~~~d~~v~~~~~~~-~~~~~~~~-~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~--~~~v~~~ 473 (577)
T 2ymu_A 399 TIASASDDKTVKLWNRNG-QLLQTLTG-HSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGH--SSSVRGV 473 (577)
T ss_dssp CEEEEETTSEEEEECTTC-CEEEEEEC-CSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECC--SSCEEEE
T ss_pred EEEEEeCCCEEEEEeCCC-CEEEEecC-CCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCC--CCCEEEE
Confidence 466677788888888765 43332211 1224556666666654443334577877884 56555443222 1234556
Q ss_pred EEeeCCe-EEEEEcCCeEEEEcCCCCEEEEeeccCCCCccccCceEEEEEEecCCcEEEEEeeecCeeEE
Q 006913 278 VVDSNGW-ISVGSLDGLLYSFSPSGVLNKFSKSDTSDSVIQSSPYWFHLLGPSIGLKAILCLMVVGQFSS 346 (626)
Q Consensus 278 vvD~dG~-IWVGT~~gGLy~~d~~g~~~~~~~~~~~~~~ilssp~V~~Il~DsdG~IwI~T~t~~Ggl~~ 346 (626)
...++|. |..++.++.|..++.+++....... ....|.++....+|.+. .++...|.+..
T Consensus 474 ~~spd~~~las~~~d~~i~iw~~~~~~~~~~~~--------h~~~v~~l~~s~dg~~l-~s~~~dg~v~l 534 (577)
T 2ymu_A 474 AFSPDGQTIASASDDKTVKLWNRNGQLLQTLTG--------HSSSVRGVAFSPDGQTI-ASASDDKTVKL 534 (577)
T ss_dssp EECTTSCEEEEEETTSEEEEEETTSCEEEEEEC--------CSSCEEEEEECTTSSCE-EEEETTSEEEE
T ss_pred EEcCCCCEEEEEeCCCEEEEEcCCCCEEEEEeC--------CCCCEEEEEEcCCCCEE-EEEECcCEEEE
Confidence 7776765 5556778889999988876554331 12234556555666643 44444444443
No 146
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.13 E-value=0.27 Score=49.51 Aligned_cols=233 Identities=9% Similarity=-0.053 Sum_probs=126.8
Q ss_pred eeeEEeeCCEEE-EEe-CCcEEEEcC-CCC--EEEEEeCCCCCCcccCeEEecCCeEEE-EE-CCeEEEEECCCCccccc
Q 006913 40 SKPLIGEDGKIY-ACS-EKTLFAFES-NGT--IAWSLDLDFTCNIGTAPVHGGTGEVYI-VA-ENRVLKVDLLKIGTSES 112 (626)
Q Consensus 40 Sspvid~dG~Iw-IgS-dggL~a~d~-~G~--~~W~~~~~~~~~i~~sp~iD~dG~IwV-gT-~ggL~~id~~~~~~~~~ 112 (626)
.......+|.+. +++ ++.+..+|. +++ ....+.... ..+.++....++.+.+ ++ ++.|..+|..++..
T Consensus 12 ~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~--~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~--- 86 (372)
T 1k8k_C 12 SCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHN--GQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTW--- 86 (372)
T ss_dssp CEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCS--SCEEEEEEETTTTEEEEEETTSCEEEEEEETTEE---
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCC--CcccEEEEeCCCCEEEEEcCCCeEEEEECCCCee---
Confidence 344444566544 454 667888887 554 333332211 2344556666776554 44 67788888766421
Q ss_pred eeEEEecCCCCCCCCCCeeEEEEEEcC-CeEEEEEcCCeEEEEeCC-CcEEEEECCcccccccccccccCCCCCccccce
Q 006913 113 ATQVFYGTGSGKGGTGAIAGIAVSTSS-SSVYINVKGRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVP 190 (626)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~I~s~~~d~d-G~LwIgT~~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~ssp 190 (626)
....... .. ...+..+....+ ..|..++.++.+..+|.+ +...+.... + .. .. ... ..++
T Consensus 87 --~~~~~~~---~~-~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~----~--~~--~~---~~~-i~~~ 148 (372)
T 1k8k_C 87 --KPTLVIL---RI-NRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKH----I--KK--PI---RST-VLSL 148 (372)
T ss_dssp --EEEEECC---CC-SSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEE----E--CT--TC---CSC-EEEE
T ss_pred --eeeEEee---cC-CCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeee----e--ec--cc---CCC-eeEE
Confidence 1111100 11 223444444444 457777777778887753 432221100 0 00 00 011 1334
Q ss_pred EEEcCCCeEEEEcCCCeEEEEeCC------------------CCeEEEEEcCCCCCcceeeeeecCC-eEEEEEcCCCEE
Q 006913 191 VIDQCEGSIYISNTQGELYSLSAH------------------SPYFNWIQDLSSFDKAFTLTPGNNG-YLYVTIPVRALV 251 (626)
Q Consensus 191 viD~~dG~LwIGT~~GgL~~ld~~------------------tg~~~w~~~~~s~~~v~sI~~D~dG-~LwVGT~~gG~l 251 (626)
...+.+..|..|+.++.|..+|.+ .++...... .....+.++....+| .|+.++ .++.+
T Consensus 149 ~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~-~d~~i 226 (372)
T 1k8k_C 149 DWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS-SSCGWVHGVCFSANGSRVAWVS-HDSTV 226 (372)
T ss_dssp EECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECC-CCSSCEEEEEECSSSSEEEEEE-TTTEE
T ss_pred EEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecC-CCCCeEEEEEECCCCCEEEEEe-CCCEE
Confidence 444324457778788889999843 334433221 112235566666666 555655 45788
Q ss_pred EEEECCCCcEEEEEecCCCCCceeeEEEeeCCeEEEEEcCCeEEEEcC
Q 006913 252 LALDTSSGNILWHKSVGPLGSAEYAPVVDSNGWISVGSLDGLLYSFSP 299 (626)
Q Consensus 252 ~alD~~tG~~~w~~~~~~l~~~~sspvvD~dG~IWVGT~~gGLy~~d~ 299 (626)
..+|..+++......... ..+..+...++|.+.++..++.+..++.
T Consensus 227 ~i~d~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~d~~i~i~~~ 272 (372)
T 1k8k_C 227 CLADADKKMAVATLASET--LPLLAVTFITESSLVAAGHDCFPVLFTY 272 (372)
T ss_dssp EEEEGGGTTEEEEEECSS--CCEEEEEEEETTEEEEEETTSSCEEEEE
T ss_pred EEEECCCCceeEEEccCC--CCeEEEEEecCCCEEEEEeCCeEEEEEc
Confidence 889988888776554331 2345567777888777778888888875
No 147
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=97.13 E-value=0.092 Score=52.56 Aligned_cols=214 Identities=9% Similarity=0.050 Sum_probs=116.4
Q ss_pred eeeeEEeeCCE-EEEEe--CCcEEEEcC-CCCEEEEEeCCCC----CCcccCeEEecCCe-EEEEE-C------------
Q 006913 39 LSKPLIGEDGK-IYACS--EKTLFAFES-NGTIAWSLDLDFT----CNIGTAPVHGGTGE-VYIVA-E------------ 96 (626)
Q Consensus 39 ~Sspvid~dG~-IwIgS--dggL~a~d~-~G~~~W~~~~~~~----~~i~~sp~iD~dG~-IwVgT-~------------ 96 (626)
...+.+..+|+ +|++. ++.|+.+|. +++..+....... ......+.++.+|+ +|++. +
T Consensus 45 ~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~ 124 (349)
T 1jmx_B 45 PGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKP 124 (349)
T ss_dssp SCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECC
T ss_pred CceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCC
Confidence 34566666774 77765 467999998 7777666654321 01134566777775 66665 3
Q ss_pred CeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEcCCeEEEEeCC-CcEEEEECCcccccc-c-
Q 006913 97 NRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTH-GQLLWSAGPVLDQLG-Y- 173 (626)
Q Consensus 97 ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~~gGL~a~d~~-G~~~w~~~~~~~~~~-~- 173 (626)
+.|+.+|..++..... ....... . .+..+....+|++|++. +.|+.+|.. ++............+ +
T Consensus 125 ~~i~~~d~~~~~~~~~-~~~~~~~-------~-~~~~~~~s~dg~l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~ 193 (349)
T 1jmx_B 125 PRLEVFSTADGLEAKP-VRTFPMP-------R-QVYLMRAADDGSLYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYS 193 (349)
T ss_dssp CEEEEEEGGGGGGBCC-SEEEECC-------S-SCCCEEECTTSCEEEES--SSEEEECTTTCCEEEEECSTTCCCTTBC
T ss_pred CeEEEEECCCccccce-eeeccCC-------C-cccceeECCCCcEEEcc--CcEEEEeCCCCceeccccccccCCcccc
Confidence 7889999876321100 1111110 1 12233345677788864 349999974 777665411000000 0
Q ss_pred --------ccccccC-------------------------------CCCCc-----------cccceEEEc-CCCeEEEE
Q 006913 174 --------RQGCTKT-------------------------------DVDCY-----------FTSVPVIDQ-CEGSIYIS 202 (626)
Q Consensus 174 --------~~~~~~~-------------------------------l~~~~-----------i~sspviD~-~dG~LwIG 202 (626)
..+.... ..... ....+.+++ .+..||++
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~ 273 (349)
T 1jmx_B 194 APDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV 273 (349)
T ss_dssp CCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE
T ss_pred CccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE
Confidence 0000000 00000 000111222 25567877
Q ss_pred cCCCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCC-eEEEEEcCCCEEEEEECCCCcEEEEEecC
Q 006913 203 NTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNG-YLYVTIPVRALVLALDTSSGNILWHKSVG 268 (626)
Q Consensus 203 T~~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG-~LwVGT~~gG~l~alD~~tG~~~w~~~~~ 268 (626)
++.|+.+|.++++.......+. .+..++.+.+| .||++. ..+.+..+|..+++.+.....+
T Consensus 274 --~~~v~~~d~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~~~~-~~~~v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 274 --LNRLAKYDLKQRKLIKAANLDH--TYYCVAFDKKGDKLYLGG-TFNDLAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp --ESEEEEEETTTTEEEEEEECSS--CCCEEEECSSSSCEEEES-BSSEEEEEETTTTEEEEEEECS
T ss_pred --cCeEEEEECccCeEEEEEcCCC--CccceEECCCCCEEEEec-CCCeEEEEeccccceeeeeecC
Confidence 6789999999988765544322 23455666666 688865 4578999999898877665443
No 148
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=97.12 E-value=0.28 Score=49.92 Aligned_cols=270 Identities=7% Similarity=-0.074 Sum_probs=134.3
Q ss_pred eeeeEEee-CCEEE-EEe-CCcEEEEcC-CCCEEEEEe--------C---CCCCCcccCeEEec-CCe-EEEEE-CCeEE
Q 006913 39 LSKPLIGE-DGKIY-ACS-EKTLFAFES-NGTIAWSLD--------L---DFTCNIGTAPVHGG-TGE-VYIVA-ENRVL 100 (626)
Q Consensus 39 ~Sspvid~-dG~Iw-IgS-dggL~a~d~-~G~~~W~~~--------~---~~~~~i~~sp~iD~-dG~-IwVgT-~ggL~ 100 (626)
........ +|.+. .|+ ++.+..+|. ++....... . ......+.++.... ++. +..++ ++.|.
T Consensus 46 v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~ 125 (408)
T 4a11_B 46 INTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLK 125 (408)
T ss_dssp EEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEE
T ss_pred EEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEE
Confidence 33444445 56544 455 566888886 443211111 0 00011233444444 444 44455 77888
Q ss_pred EEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEE---cCCeEEEEEcCCeEEEEeCC-CcEEEEECCcccccccccc
Q 006913 101 KVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVST---SSSSVYINVKGRALFAFMTH-GQLLWSAGPVLDQLGYRQG 176 (626)
Q Consensus 101 ~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d---~dG~LwIgT~~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~ 176 (626)
.+|..++.. ...+.. ........... ....+..++.++.|..+|.. ++....+..
T Consensus 126 iwd~~~~~~-----~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~---------- 184 (408)
T 4a11_B 126 VWDTNTLQT-----ADVFNF------EETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQG---------- 184 (408)
T ss_dssp EEETTTTEE-----EEEEEC------SSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECC----------
T ss_pred EeeCCCCcc-----ceeccC------CCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecC----------
Confidence 899877531 111111 11111211111 22256777778889999974 655443310
Q ss_pred cccCCCCCccccceEEEcCCC-eEEEEcCCCeEEEEeCCCCeEEEEEc-C--------------CCCCcceeeeeecCCe
Q 006913 177 CTKTDVDCYFTSVPVIDQCEG-SIYISNTQGELYSLSAHSPYFNWIQD-L--------------SSFDKAFTLTPGNNGY 240 (626)
Q Consensus 177 ~~~~l~~~~i~sspviD~~dG-~LwIGT~~GgL~~ld~~tg~~~w~~~-~--------------~s~~~v~sI~~D~dG~ 240 (626)
+ ... ..++...+.+. .+..|+.+|.|..+|.+++......- . .....+.++....+|.
T Consensus 185 --~---~~~-v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 258 (408)
T 4a11_B 185 --H---RQE-ILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGL 258 (408)
T ss_dssp --C---CSC-EEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSS
T ss_pred --C---CCc-EEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCC
Confidence 0 011 13344443123 26678888889999987754211110 0 0112355666666774
Q ss_pred -EEEEEcCCCEEEEEECCCCcEEEEEecC--C--CCCceeeEEEeeCCeEEEEEcCCeEEEEcCC-CCEEEEeeccCCCC
Q 006913 241 -LYVTIPVRALVLALDTSSGNILWHKSVG--P--LGSAEYAPVVDSNGWISVGSLDGLLYSFSPS-GVLNKFSKSDTSDS 314 (626)
Q Consensus 241 -LwVGT~~gG~l~alD~~tG~~~w~~~~~--~--l~~~~sspvvD~dG~IWVGT~~gGLy~~d~~-g~~~~~~~~~~~~~ 314 (626)
|.+++ .++.+..+|..+++........ . ..........+..+.+.+++.++.|..+|.. ++.......
T Consensus 259 ~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~----- 332 (408)
T 4a11_B 259 HLLTVG-TDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKG----- 332 (408)
T ss_dssp EEEEEE-TTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECC-----
T ss_pred EEEEec-CCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeecc-----
Confidence 55555 4567888898877653221111 0 0011122223445677777888999999964 555543321
Q ss_pred ccccCceEEEEEEecCCcEEEEEeeecCeeE
Q 006913 315 VIQSSPYWFHLLGPSIGLKAILCLMVVGQFS 345 (626)
Q Consensus 315 ~ilssp~V~~Il~DsdG~IwI~T~t~~Ggl~ 345 (626)
....|.++....+|.+. .+++..|.+.
T Consensus 333 ---~~~~v~~~~~s~~~~~l-~s~~~dg~i~ 359 (408)
T 4a11_B 333 ---HYKTVDCCVFQSNFQEL-YSGSRDCNIL 359 (408)
T ss_dssp ---CSSCEEEEEEETTTTEE-EEEETTSCEE
T ss_pred ---CCCeEEEEEEcCCCCEE-EEECCCCeEE
Confidence 12234555555666543 3444444443
No 149
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.10 E-value=0.33 Score=56.55 Aligned_cols=228 Identities=11% Similarity=0.051 Sum_probs=124.5
Q ss_pred CCEEEEEeCCcEEEEcCCC-CEEEEEeCCCCCCcccCeEEec-CCeEEEEE--CCeEEEEECCCCccccceeEEEecCCC
Q 006913 47 DGKIYACSEKTLFAFESNG-TIAWSLDLDFTCNIGTAPVHGG-TGEVYIVA--ENRVLKVDLLKIGTSESATQVFYGTGS 122 (626)
Q Consensus 47 dG~IwIgSdggL~a~d~~G-~~~W~~~~~~~~~i~~sp~iD~-dG~IwVgT--~ggL~~id~~~~~~~~~~~~~~~~~~~ 122 (626)
...|++.....+..++.++ ...... ... ....++.+|. ++.||+.. .+.|++++.++..... .........
T Consensus 395 ~p~Ll~an~~~Ir~i~l~~~~~~~l~-~~~--~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~-~~~~vi~~~- 469 (791)
T 3m0c_C 395 IAYLFFTNRHEVRKMTLDRSEYTSLI-PNL--RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVS-SYDTVISRD- 469 (791)
T ss_dssp CCEEEEECBSSEEEECTTSCCCEEEE-CSC--SSEEEEEEETTTTEEEEEETTTTEEEEEEC---------CEEEECSS-
T ss_pred ccccccccccceeEeeccCCcceeee-cCC--CceEEEeecccCCeeEEeeccceeEEEEeccCCCCCc-ceeEEEecC-
Confidence 3455555556677777633 222111 111 1223455565 67899886 5789988876521000 011111110
Q ss_pred CCCCCCCeeEEEEEEcCCeEEEEEcC-CeEEEEeCCCcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEE
Q 006913 123 GKGGTGAIAGIAVSTSSSSVYINVKG-RALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYI 201 (626)
Q Consensus 123 ~~~~~~~~I~s~~~d~dG~LwIgT~~-gGL~a~d~~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwI 201 (626)
.....++++-..+++||+.... +.|.+++.+|...-... . ..+ .....+++|..+|.||+
T Consensus 470 ----l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~--------~----~~l---~~P~gIaVDp~~g~LYw 530 (791)
T 3m0c_C 470 ----IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLF--------R----ENG---SKPRAIVVDPVHGFMYW 530 (791)
T ss_dssp ----CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEE--------E----CTT---CCEEEEEEETTTTEEEE
T ss_pred ----CCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEE--------e----CCC---CCcceEEEecCCCCEEE
Confidence 1112233332356799998653 67888898865433220 0 000 01244678864689999
Q ss_pred EcCC--CeEEEEeCCCCeEEEEEcCCCCCcceeeeee-cCCeEEEEEcCCCEEEEEECCCCcEEEEE-ecC-CCCCceee
Q 006913 202 SNTQ--GELYSLSAHSPYFNWIQDLSSFDKAFTLTPG-NNGYLYVTIPVRALVLALDTSSGNILWHK-SVG-PLGSAEYA 276 (626)
Q Consensus 202 GT~~--GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D-~dG~LwVGT~~gG~l~alD~~tG~~~w~~-~~~-~l~~~~ss 276 (626)
..+. +.|.+++.++......... .......|++| .+++||++......|..++.. |..+... ... .+. ....
T Consensus 531 tD~g~~~~I~~~~~dG~~~~~lv~~-~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~d-G~~~~~v~~~~~~l~-~P~g 607 (791)
T 3m0c_C 531 TDWGTPAKIKKGGLNGVDIYSLVTE-NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN-GGNRKTILEDEKRLA-HPFS 607 (791)
T ss_dssp EECSSSCEEEEEETTSCCEEEEECS-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETT-SCSCEEEEECTTTTS-SEEE
T ss_pred ecCCCCCeEEEEecCCCceEEEEeC-CCCCceEEEEecCCCeEEEEeCCCCcEEEEecC-CCceEEEecCCCccC-CCCE
Confidence 8753 5799999987655433221 22345678888 678999998666788888864 4333222 211 111 2234
Q ss_pred EEEeeCCeEEEEEc-CCeEEEEcC-CCC
Q 006913 277 PVVDSNGWISVGSL-DGLLYSFSP-SGV 302 (626)
Q Consensus 277 pvvD~dG~IWVGT~-~gGLy~~d~-~g~ 302 (626)
+.++ .++||+... ++.|++++. +|+
T Consensus 608 lav~-~~~lYwtD~~~~~I~~~dk~tG~ 634 (791)
T 3m0c_C 608 LAVF-EDKVFWTDIINEAIFSANRLTGS 634 (791)
T ss_dssp EEEE-TTEEEEEETTTTEEEEEETTTCC
T ss_pred EEEe-CCEEEEEECCCCEEEEEeCCCCc
Confidence 5565 568888764 467888875 453
No 150
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=97.07 E-value=0.48 Score=51.27 Aligned_cols=255 Identities=11% Similarity=0.040 Sum_probs=136.3
Q ss_pred eCCE-EEEEe-CCcEEEEcCCCCEEEEEeCCCCCCcccCeEEecCCe-EEEEE-CCeEEEEECCCCccccceeEEEecCC
Q 006913 46 EDGK-IYACS-EKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGE-VYIVA-ENRVLKVDLLKIGTSESATQVFYGTG 121 (626)
Q Consensus 46 ~dG~-IwIgS-dggL~a~d~~G~~~W~~~~~~~~~i~~sp~iD~dG~-IwVgT-~ggL~~id~~~~~~~~~~~~~~~~~~ 121 (626)
.+|. |..++ ++.+..+|.+++......... ..+.++....+|. |..+. ++.|...+.+... ...+.
T Consensus 190 ~~~~~l~~~~~d~~v~~w~~~~~~~~~~~~~~--~~v~~~~~s~dg~~l~~~~~d~~i~~w~~~~~~------~~~~~-- 259 (577)
T 2ymu_A 190 PDGQTIASASDDKTVKLWNRNGQLLQTLTGHS--SSVRGVAFSPDGQTIASASDDKTVKLWNRNGQL------LQTLT-- 259 (577)
T ss_dssp TTSSCEEEEETTSEEEEECTTSCEEEEEECCS--SCEEEEEECTTSSCEEEEETTSCEEEECTTSCE------EEEEC--
T ss_pred CCCCEEEEEcCCCEEEEEeCCCcEEEEEecCC--CCEEEEEECCCCCEEEEEeCCCEEEEEeCCCCE------EEEEe--
Confidence 4554 44455 456777777777654443221 2234555666766 44455 5667777765431 11111
Q ss_pred CCCCCCCCeeEEEEEEcCC-eEEEEEcCCeEEEEeCCCcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEE
Q 006913 122 SGKGGTGAIAGIAVSTSSS-SVYINVKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIY 200 (626)
Q Consensus 122 ~~~~~~~~~I~s~~~d~dG-~LwIgT~~gGL~a~d~~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~Lw 200 (626)
.. ...+..+....++ .|..++.++.+..++.+++....... + ...+ ..+...+.+..|.
T Consensus 260 ---~~-~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~~~~~~~~~------------h---~~~v-~~~~~~~~~~~l~ 319 (577)
T 2ymu_A 260 ---GH-SSSVNGVAFRPDGQTIASASDDKTVKLWNRNGQLLQTLTG------------H---SSSV-WGVAFSPDGQTIA 319 (577)
T ss_dssp ---CC-SSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECC------------C---SSCE-EEEEECTTSSEEE
T ss_pred ---cC-CCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCCcEEEEEec------------C---CCCe-EEEEECCCCCEEE
Confidence 11 1233434344444 46666777778888887766543210 0 0111 2334443234566
Q ss_pred EEcCCCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCCeEEEEEcCCCEEEEEECCCCcEEEEEecCCCCCceeeEEEe
Q 006913 201 ISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPVVD 280 (626)
Q Consensus 201 IGT~~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~~~sspvvD 280 (626)
.+..++.|..+|..+..+..... ....+.+++...+|...+....++.+..+| .+++........ ...+.++.+.
T Consensus 320 t~~~d~~i~~w~~~~~~~~~~~~--~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~-~~~~~~~~~~~~--~~~v~~~~~s 394 (577)
T 2ymu_A 320 SASDDKTVKLWNRNGQHLQTLTG--HSSSVWGVAFSPDGQTIASASDDKTVKLWN-RNGQLLQTLTGH--SSSVRGVAFS 394 (577)
T ss_dssp EEETTSCEEEEETTSCEEEEECC--CSSCEEEEEECTTSSEEEEEETTSEEEEEE-TTCCEEEEEECC--SSCEEEEEEC
T ss_pred EEeCCCeEEEEeCCCCeeEEEeC--CCCCEEEEEECCCCCEEEEEeCCCEEEEEc-CCCCEEEEecCC--CCCeEEEEEC
Confidence 67777888888888765543321 123456667777775444333456777778 466665443322 1234556677
Q ss_pred eCCe-EEEEEcCCeEEEEcCCCCEEEEeeccCCCCccccCceEEEEEEecCCcEEEEEeeecCee
Q 006913 281 SNGW-ISVGSLDGLLYSFSPSGVLNKFSKSDTSDSVIQSSPYWFHLLGPSIGLKAILCLMVVGQF 344 (626)
Q Consensus 281 ~dG~-IWVGT~~gGLy~~d~~g~~~~~~~~~~~~~~ilssp~V~~Il~DsdG~IwI~T~t~~Ggl 344 (626)
++|. |..|+.++.|..++.+++....... ....|.++....++... .+....|.+
T Consensus 395 ~dg~~l~~~~~d~~v~~~~~~~~~~~~~~~--------~~~~v~~~~~s~d~~~l-~~~~~d~~v 450 (577)
T 2ymu_A 395 PDGQTIASASDDKTVKLWNRNGQLLQTLTG--------HSSSVWGVAFSPDDQTI-ASASDDKTV 450 (577)
T ss_dssp TTSSCEEEEETTSEEEEECTTCCEEEEEEC--------CSSCEEEEEECTTSSEE-EEEETTSEE
T ss_pred CCCCEEEEEeCCCEEEEEeCCCCEEEEecC--------CCCCeEEEEECCCCCEE-EEEcCCCEE
Confidence 6664 6667888889999987765543321 12234455555555543 343333433
No 151
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.06 E-value=0.081 Score=54.44 Aligned_cols=229 Identities=11% Similarity=0.093 Sum_probs=121.2
Q ss_pred eeeeEEeeCCEEEEEe-CCcEEEEcCCCCEEEEEeCCCC--CCcccCeEEecCCeEEEEE-CCeEEEEECCCCcccccee
Q 006913 39 LSKPLIGEDGKIYACS-EKTLFAFESNGTIAWSLDLDFT--CNIGTAPVHGGTGEVYIVA-ENRVLKVDLLKIGTSESAT 114 (626)
Q Consensus 39 ~Sspvid~dG~IwIgS-dggL~a~d~~G~~~W~~~~~~~--~~i~~sp~iD~dG~IwVgT-~ggL~~id~~~~~~~~~~~ 114 (626)
+....++ ++.+|++. .+.|++-...|+ .|....... ......+....++.+|+++ .++|++- .+.+.
T Consensus 82 ~~~i~~~-~~~~~~~g~~g~i~~S~DgG~-tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~v~~S-~DgG~------ 152 (327)
T 2xbg_A 82 FNSVSFQ-GNEGWIVGEPPIMLHTTDGGQ-SWSQIPLDPKLPGSPRLIKALGNGSAEMITNVGAIYRT-KDSGK------ 152 (327)
T ss_dssp EEEEEEE-TTEEEEEEETTEEEEESSTTS-SCEECCCCTTCSSCEEEEEEEETTEEEEEETTCCEEEE-SSTTS------
T ss_pred EEEEEec-CCeEEEEECCCeEEEECCCCC-CceECccccCCCCCeEEEEEECCCCEEEEeCCccEEEE-cCCCC------
Confidence 4444554 47889876 455665433344 575532110 0112334445678899887 5566654 44332
Q ss_pred EEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEcCCeEEEEeCCCcEEEEECCcccccccccccccCCCCCccccceEEEc
Q 006913 115 QVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQ 194 (626)
Q Consensus 115 ~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~~gGL~a~d~~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~ 194 (626)
.|...... ... .+..+....++.+|+....++++.-+..|...|.... . + . ...+ ..+.++.
T Consensus 153 tW~~~~~~---~~~-~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~---~-~------~---~~~~-~~~~~~~ 214 (327)
T 2xbg_A 153 NWQALVQE---AIG-VMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHN---R-T------T---SRRL-HNMGFTP 214 (327)
T ss_dssp SEEEEECS---CCC-CEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEE---C-C------S---SSCE-EEEEECT
T ss_pred CCEEeecC---CCc-ceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECC---C-C------C---CCcc-ceeEECC
Confidence 23221111 111 2334445567888887777777776544333465300 0 0 0 0111 3345564
Q ss_pred CCCeEEEEcCCCeEEEEeCCCCeEEEEEcC-C---CCCcceeeeeecCCeEEEEEcCCCEEEEEECCCCcEEEEEecC--
Q 006913 195 CEGSIYISNTQGELYSLSAHSPYFNWIQDL-S---SFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVG-- 268 (626)
Q Consensus 195 ~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~-~---s~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~-- 268 (626)
++.+|+.+.+|.++.-+.++ -..|.... + ....+..+..+.++.+|+++.. +.++.- .++-..|.....
T Consensus 215 -~g~~~~~~~~G~~~~s~~D~-G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~-g~i~~S--~DgG~tW~~~~~~~ 289 (327)
T 2xbg_A 215 -DGRLWMIVNGGKIAFSDPDN-SENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGA-GALLCS--QDGGQTWQQDVDVK 289 (327)
T ss_dssp -TSCEEEEETTTEEEEEETTE-EEEECCCBCTTSSCCSCEEEEEESSSSCEEEEEST-TCEEEE--SSTTSSCEECGGGT
T ss_pred -CCCEEEEeCCceEEEecCCC-CCeeEeccCCcccCCcceEEEEecCCCEEEEEeCC-CeEEEe--CCCCcccEEcCccC
Confidence 78999988777666543343 34576321 2 1122455666667899998754 455432 233356764221
Q ss_pred CCCCceeeEEEeeCCeEEEEEcCCeEEEEcC
Q 006913 269 PLGSAEYAPVVDSNGWISVGSLDGLLYSFSP 299 (626)
Q Consensus 269 ~l~~~~sspvvD~dG~IWVGT~~gGLy~~d~ 299 (626)
.....+..+..+.++.+|+++.+|.|++++.
T Consensus 290 ~~~~~~~~v~~~~~~~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 290 KVPSNFYKILFFSPDQGFILGQKGILLRYVT 320 (327)
T ss_dssp TSSSCCCEEEEEETTEEEEECSTTEEEEECC
T ss_pred CCCCCeEEEEEECCCceEEEcCCceEEEEcC
Confidence 1111233455555788999988888888864
No 152
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.06 E-value=0.33 Score=51.04 Aligned_cols=188 Identities=13% Similarity=0.093 Sum_probs=94.2
Q ss_pred EEeeCCEEEEEe--------------CCcEEEEcCC---CCEE-EEEeCC-CC----CCcccCeEEecCC--eEEEEE-C
Q 006913 43 LIGEDGKIYACS--------------EKTLFAFESN---GTIA-WSLDLD-FT----CNIGTAPVHGGTG--EVYIVA-E 96 (626)
Q Consensus 43 vid~dG~IwIgS--------------dggL~a~d~~---G~~~-W~~~~~-~~----~~i~~sp~iD~dG--~IwVgT-~ 96 (626)
.++.+|.+|+++ .|.|+.+|.+ ++.. +...-. .. .....+...|.+| +|||+. .
T Consensus 56 ~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~ 135 (355)
T 3sre_A 56 EILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHP 135 (355)
T ss_dssp EECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECS
T ss_pred EEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECC
Confidence 455689999985 4568888863 3332 222110 00 0111123333345 477774 2
Q ss_pred C-----eEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEc------------------CCeEEE
Q 006913 97 N-----RVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVK------------------GRALFA 153 (626)
Q Consensus 97 g-----gL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~------------------~gGL~a 153 (626)
. +|+.+++.+... .+.-... .. .-...+....+.+|.+|+++. .+.|++
T Consensus 136 ~~~s~ielf~~d~~~~~~-----~~~~~~~-g~--~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr 207 (355)
T 3sre_A 136 GSSSTVEVFKFQEEEKSL-----LHLKTIR-HK--LLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTY 207 (355)
T ss_dssp TTCCEEEEEEEETTTTEE-----EEEEEEC-CT--TCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEE
T ss_pred CCCCeEEEEEEECCCCEE-----EEEeccc-cC--CCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEE
Confidence 1 488888876421 1111111 11 112334566788999999864 246788
Q ss_pred EeCCCcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcC-CCeEEEEeCCC-CeEEEEEcCCCCCcce
Q 006913 154 FMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNT-QGELYSLSAHS-PYFNWIQDLSSFDKAF 231 (626)
Q Consensus 154 ~d~~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~-~GgL~~ld~~t-g~~~w~~~~~s~~~v~ 231 (626)
+++. +..-.. ..+. +..-++..+.+..||++.. .+.|++++.+. |...-..........-
T Consensus 208 ~d~~-~~~~~~----~~l~-------------~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~~g~PD 269 (355)
T 3sre_A 208 YSPN-DVRVVA----EGFD-------------FANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVD 269 (355)
T ss_dssp ECTT-CCEEEE----EEES-------------SEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEE
T ss_pred EECC-eEEEee----cCCc-------------ccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEeCCCCCc
Confidence 8773 221111 0000 1122455542457898754 56788887642 3332211111111233
Q ss_pred eeeeec-CCeEEEEE-cCCCEEEEEEC
Q 006913 232 TLTPGN-NGYLYVTI-PVRALVLALDT 256 (626)
Q Consensus 232 sI~~D~-dG~LwVGT-~~gG~l~alD~ 256 (626)
.+++|. +|+||++. .+++.+.++++
T Consensus 270 Gi~vD~e~G~lwva~~~~g~~v~~~~P 296 (355)
T 3sre_A 270 NISVDPVTGDLWVGCHPNGMRIFFYDA 296 (355)
T ss_dssp EEEECTTTCCEEEEEESCHHHHHSCCT
T ss_pred eEEEeCCCCcEEEEecCCceEEEEECC
Confidence 578898 59999965 33333443443
No 153
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.06 E-value=0.12 Score=58.48 Aligned_cols=188 Identities=16% Similarity=0.097 Sum_probs=113.4
Q ss_pred eEEe-eCCEEEEEe--CCcEEEEcCCCC-EEEEEeCCCCCCcccCeEEec-CCeEEEEE--CCeEEEEECCCCcccccee
Q 006913 42 PLIG-EDGKIYACS--EKTLFAFESNGT-IAWSLDLDFTCNIGTAPVHGG-TGEVYIVA--ENRVLKVDLLKIGTSESAT 114 (626)
Q Consensus 42 pvid-~dG~IwIgS--dggL~a~d~~G~-~~W~~~~~~~~~i~~sp~iD~-dG~IwVgT--~ggL~~id~~~~~~~~~~~ 114 (626)
...| .+|.||+.. .+.+++++.+|. .......+. .....+.+|. .++||++. .+.|.++++++.. .
T Consensus 42 l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~--~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~-----~ 114 (628)
T 4a0p_A 42 LDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGL--DYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQH-----R 114 (628)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSC--SCCCEEEEETTTTEEEEEETTTTEEEEEETTSTT-----C
T ss_pred EEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCC--CCcceEEEEeCCCEEEEEECCCCEEEEEecCCCc-----E
Confidence 3444 368898876 567888887653 211122111 1233567774 58899886 5789999987642 1
Q ss_pred EEEecCCCCCCCCCCeeEEEEEE-cCCeEEEEEc--CCeEEEEeCCCcEEEEECCcccccccccccccCCCCCccccceE
Q 006913 115 QVFYGTGSGKGGTGAIAGIAVST-SSSSVYINVK--GRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPV 191 (626)
Q Consensus 115 ~~~~~~~~~~~~~~~~I~s~~~d-~dG~LwIgT~--~gGL~a~d~~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspv 191 (626)
....... . ... ..+..+ .+|.||+... ...|...+++|...-.... .+ .....++
T Consensus 115 ~~l~~~~----l-~~P-~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~---~~-------------~~P~Gla 172 (628)
T 4a0p_A 115 QVLVWKD----L-DSP-RALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVP---NV-------------GRANGLT 172 (628)
T ss_dssp EEEECSS----C-CCE-EEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC---SC-------------SSEEEEE
T ss_pred EEEEeCC----C-CCc-ccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEEC---CC-------------CCcceEE
Confidence 2222111 1 122 334455 5899999874 3678889887654322100 00 0123367
Q ss_pred EEcCCCeEEEEcC-CCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCCeEEEEEcCCCEEEEEECCCCcE
Q 006913 192 IDQCEGSIYISNT-QGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNI 261 (626)
Q Consensus 192 iD~~dG~LwIGT~-~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~tG~~ 261 (626)
+|..+++||++.. .+.|.+++.++........ .......++++. ++||+.....+.+..+|+.+|+.
T Consensus 173 lD~~~~~LY~aD~~~~~I~~~d~dG~~~~v~~~--~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~~ 240 (628)
T 4a0p_A 173 IDYAKRRLYWTDLDTNLIESSNMLGLNREVIAD--DLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQN 240 (628)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCSCEEEEE--CCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCS
T ss_pred EccccCEEEEEECCCCEEEEEcCCCCceEEeec--cCCCceEEEEEC-CEEEEecCCCCEEEEEECCCCCc
Confidence 7754688988865 5679999988755432222 123455677774 79999887778999999877753
No 154
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.04 E-value=0.42 Score=50.21 Aligned_cols=184 Identities=9% Similarity=0.020 Sum_probs=111.9
Q ss_pred CCe-EEEEE-CCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEcCCeEEEEeCC-CcEEEEE
Q 006913 88 TGE-VYIVA-ENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTH-GQLLWSA 164 (626)
Q Consensus 88 dG~-IwVgT-~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~~gGL~a~d~~-G~~~w~~ 164 (626)
+|. +..|+ ++.|..+|..++.. ...+. .... .|..+.. .+..|..|+.++.|..+|.. ++....+
T Consensus 142 d~~~l~~g~~dg~i~iwd~~~~~~-----~~~~~-----~h~~-~v~~l~~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~ 209 (435)
T 1p22_A 142 DDQKIVSGLRDNTIKIWDKNTLEC-----KRILT-----GHTG-SVLCLQY-DERVIITGSSDSTVRVWDVNTGEMLNTL 209 (435)
T ss_dssp CSSEEEEEESSSCEEEEESSSCCE-----EEEEC-----CCSS-CEEEEEC-CSSEEEEEETTSCEEEEESSSCCEEEEE
T ss_pred CCCEEEEEeCCCeEEEEeCCCCeE-----EEEEc-----CCCC-cEEEEEE-CCCEEEEEcCCCeEEEEECCCCcEEEEE
Confidence 444 44555 78899999877531 22221 1112 2333222 45677888888889999975 7766543
Q ss_pred CCcccccccccccccCCCCCccccceEEEcCCCeEEEEcCCCeEEEEeCCCCeEEEE-Ec-CCCCCcceeeeeecCCeEE
Q 006913 165 GPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWI-QD-LSSFDKAFTLTPGNNGYLY 242 (626)
Q Consensus 165 ~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~~GgL~~ld~~tg~~~w~-~~-~~s~~~v~sI~~D~dG~Lw 242 (626)
.. + ...+ .++..+ ++.|..|+.++.|..+|.+++..... .. .+....+.++..+ ...|.
T Consensus 210 ~~------------h---~~~v-~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~ 270 (435)
T 1p22_A 210 IH------------H---CEAV-LHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD-DKYIV 270 (435)
T ss_dssp CC------------C---CSCE-EEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEE-TTEEE
T ss_pred cC------------C---CCcE-EEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeC-CCEEE
Confidence 10 0 0111 223333 67888898899999999987654321 11 1112345555553 45677
Q ss_pred EEEcCCCEEEEEECCCCcEEEEEecCCCCCceeeEEEeeCCeEEEEEcCCeEEEEcCC-CCEEEE
Q 006913 243 VTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPVVDSNGWISVGSLDGLLYSFSPS-GVLNKF 306 (626)
Q Consensus 243 VGT~~gG~l~alD~~tG~~~w~~~~~~l~~~~sspvvD~dG~IWVGT~~gGLy~~d~~-g~~~~~ 306 (626)
+|+ .++.+..+|..+++......... ..+.++..+ ++.+..|+.++.|..+|.. ++....
T Consensus 271 s~~-~dg~i~vwd~~~~~~~~~~~~~~--~~v~~~~~~-~~~l~~g~~dg~i~iwd~~~~~~~~~ 331 (435)
T 1p22_A 271 SAS-GDRTIKVWNTSTCEFVRTLNGHK--RGIACLQYR-DRLVVSGSSDNTIRLWDIECGACLRV 331 (435)
T ss_dssp EEE-TTSEEEEEETTTCCEEEEEECCS--SCEEEEEEE-TTEEEEEETTSCEEEEETTTCCEEEE
T ss_pred EEe-CCCeEEEEECCcCcEEEEEcCCC--CcEEEEEeC-CCEEEEEeCCCeEEEEECCCCCEEEE
Confidence 776 45788899999998876654321 223445554 6789999999999999975 655443
No 155
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=97.04 E-value=0.32 Score=58.50 Aligned_cols=243 Identities=7% Similarity=0.025 Sum_probs=129.6
Q ss_pred eeCCEEE-EEeCCcEEEEcC-CCCEEEEEeCCCCCCcccCeEEecCCeEEEEE--CCeEEEEECCCCccccceeEEEecC
Q 006913 45 GEDGKIY-ACSEKTLFAFES-NGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVA--ENRVLKVDLLKIGTSESATQVFYGT 120 (626)
Q Consensus 45 d~dG~Iw-IgSdggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~dG~IwVgT--~ggL~~id~~~~~~~~~~~~~~~~~ 120 (626)
..+|... +++++.+..++. ++........... ..+.++....++.+.+.. ++.|..++..++.. ...+.
T Consensus 807 s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~-----~~~~~- 879 (1249)
T 3sfz_A 807 SADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHH-STIQYCDFSPYDHLAVIALSQYCVELWNIDSRLK-----VADCR- 879 (1249)
T ss_dssp CTTSSEEEEEETTEEEEEETTTCCEEEEEECSSS-SCCCEEEECSSTTEEEEECSSSCEEEEETTTTEE-----EEEEC-
T ss_pred CCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCC-CceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCce-----eeecC-
Confidence 3455544 455788999997 7766554433221 233455566677755544 67888888877531 11111
Q ss_pred CCCCCCCCCeeEEEEEEcCC-eEEEEEcCCeEEEEeCC-Cc--------------------EEEEECC--cccccccccc
Q 006913 121 GSGKGGTGAIAGIAVSTSSS-SVYINVKGRALFAFMTH-GQ--------------------LLWSAGP--VLDQLGYRQG 176 (626)
Q Consensus 121 ~~~~~~~~~~I~s~~~d~dG-~LwIgT~~gGL~a~d~~-G~--------------------~~w~~~~--~~~~~~~~~~ 176 (626)
... ..+..+....+| .|..++.++.+..++.. +. ....... .........+
T Consensus 880 ----~h~-~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 954 (1249)
T 3sfz_A 880 ----GHL-SWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTG 954 (1249)
T ss_dssp ----CCS-SCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSC
T ss_pred ----CCc-cceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcc
Confidence 111 233444444444 46666666667776632 10 0000000 0000000000
Q ss_pred cccCCCCCccccceEEEcCCCeEEEEcCCCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCCeEEEEEcCCCEEEEEEC
Q 006913 177 CTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDT 256 (626)
Q Consensus 177 ~~~~l~~~~i~sspviD~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG~LwVGT~~gG~l~alD~ 256 (626)
......... ..+....+.+..+.+|+.+|.|..++..+++...... .....+.++....+|...+....++.+...|.
T Consensus 955 ~~~~~~~~~-i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~-~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~ 1032 (1249)
T 3sfz_A 955 QIDYLPEAQ-VSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGV-GHKKAVRHIQFTADGKTLISSSEDSVIQVWNW 1032 (1249)
T ss_dssp CEEEECCSC-EEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECC-CCSSCCCCEEECSSSSCEEEECSSSBEEEEET
T ss_pred eEEEcccCc-EEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecc-cCCCceEEEEECCCCCEEEEEcCCCEEEEEEC
Confidence 000000011 1223344335567788889999999998877654322 11223555666667754444435578888898
Q ss_pred CCCcEEEEEecCCCCCceeeEEEeeCCeEEEEEcCCeEEEEcCC-CCEE
Q 006913 257 SSGNILWHKSVGPLGSAEYAPVVDSNGWISVGSLDGLLYSFSPS-GVLN 304 (626)
Q Consensus 257 ~tG~~~w~~~~~~l~~~~sspvvD~dG~IWVGT~~gGLy~~d~~-g~~~ 304 (626)
.++........ ...+..+...+++.+..++.++.+..+|.. ++..
T Consensus 1033 ~~~~~~~~~~~---~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~ 1078 (1249)
T 3sfz_A 1033 QTGDYVFLQAH---QETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIE 1078 (1249)
T ss_dssp TTTEEECCBCC---SSCEEEEEECSSSEEEEEESSSEEEEEETTTTCCC
T ss_pred CCCceEEEecC---CCcEEEEEEcCCCcEEEEECCCcEEEEECCCCcee
Confidence 88876532211 123455666778999999999999999964 5543
No 156
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=97.00 E-value=1.1 Score=53.95 Aligned_cols=231 Identities=10% Similarity=-0.003 Sum_probs=131.8
Q ss_pred eeeeEEeeCCEEEE-Ee-CCcEEEEcC-CCCEEEEEeCCCCCCcccCeEEecCCeEEEE-E-CCeEEEEECCCCccccce
Q 006913 39 LSKPLIGEDGKIYA-CS-EKTLFAFES-NGTIAWSLDLDFTCNIGTAPVHGGTGEVYIV-A-ENRVLKVDLLKIGTSESA 113 (626)
Q Consensus 39 ~Sspvid~dG~IwI-gS-dggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~dG~IwVg-T-~ggL~~id~~~~~~~~~~ 113 (626)
........+|.+.+ |+ ++.+..+|. ++.....+.... ..+.++....+|.+.+. + ++.|..+|..++..
T Consensus 618 v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~--~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~---- 691 (1249)
T 3sfz_A 618 VYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHE--DEVLCCAFSSDDSYIATCSADKKVKIWDSATGKL---- 691 (1249)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCS--SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE----
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCC--CCEEEEEEecCCCEEEEEeCCCeEEEEECCCCce----
Confidence 34444546665544 45 567888887 777655443211 23445666677765544 4 67899999887642
Q ss_pred eEEEecCCCCCCCCCCeeEEEEEEc--CC-eEEEEEcCCeEEEEeCC-CcEEEEECCcccccccccccccCCCCCccccc
Q 006913 114 TQVFYGTGSGKGGTGAIAGIAVSTS--SS-SVYINVKGRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSV 189 (626)
Q Consensus 114 ~~~~~~~~~~~~~~~~~I~s~~~d~--dG-~LwIgT~~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~ss 189 (626)
...+.. ... .+..+.... ++ .+..|+.++.|..+|.. ++....... + ...+ .+
T Consensus 692 -~~~~~~-----~~~-~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~------------h---~~~v-~~ 748 (1249)
T 3sfz_A 692 -VHTYDE-----HSE-QVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFG------------H---TNSV-NH 748 (1249)
T ss_dssp -EEEEEC-----CSS-CEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECC------------C---SSCE-EE
T ss_pred -EEEEcC-----CCC-cEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecC------------C---CCCE-EE
Confidence 222211 112 233333322 22 34556777778899974 766554310 0 0111 23
Q ss_pred eEEEcCCCeEEEEcCCCeEEEEeCCCCeEEEEEcCCC------------CCcceeeeeecCCeEEEEEcCCCEEEEEECC
Q 006913 190 PVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSS------------FDKAFTLTPGNNGYLYVTIPVRALVLALDTS 257 (626)
Q Consensus 190 pviD~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s------------~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~ 257 (626)
+...+.+..|..++.+|.|..+|..++.......... ...+.++....+|...+... .+.+..+|..
T Consensus 749 ~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~-~~~v~~~d~~ 827 (1249)
T 3sfz_A 749 CRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA-KNKVLLFDIH 827 (1249)
T ss_dssp EEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEE-TTEEEEEETT
T ss_pred EEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEc-CCcEEEEEec
Confidence 3444324567778888889999998876654432110 01234455566776655553 4688889998
Q ss_pred CCcEEEEEecCCCCCceeeEEEeeCC-eEEEEEcCCeEEEEcCC
Q 006913 258 SGNILWHKSVGPLGSAEYAPVVDSNG-WISVGSLDGLLYSFSPS 300 (626)
Q Consensus 258 tG~~~w~~~~~~l~~~~sspvvD~dG-~IWVGT~~gGLy~~d~~ 300 (626)
++........+. ...+.++...+++ .+.+|+.++.+..++..
T Consensus 828 ~~~~~~~~~~~~-~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~ 870 (1249)
T 3sfz_A 828 TSGLLAEIHTGH-HSTIQYCDFSPYDHLAVIALSQYCVELWNID 870 (1249)
T ss_dssp TCCEEEEEECSS-SSCCCEEEECSSTTEEEEECSSSCEEEEETT
T ss_pred CCCceeEEcCCC-CCceEEEEEcCCCCEEEEEeCCCeEEEEEcC
Confidence 888776554332 1223445555555 56667778888889875
No 157
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=96.99 E-value=0.44 Score=49.50 Aligned_cols=221 Identities=10% Similarity=-0.005 Sum_probs=129.4
Q ss_pred CCEEEEEe-CCcEEEEcC-CCCEEEEEeCCCCCCcccCeEEecCCeE-EEEE-CCeEEEEECCCCccccceeEEEecCCC
Q 006913 47 DGKIYACS-EKTLFAFES-NGTIAWSLDLDFTCNIGTAPVHGGTGEV-YIVA-ENRVLKVDLLKIGTSESATQVFYGTGS 122 (626)
Q Consensus 47 dG~IwIgS-dggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~dG~I-wVgT-~ggL~~id~~~~~~~~~~~~~~~~~~~ 122 (626)
.+.+.+++ ++.++.+|. +|+.......... ..+.++....+|.+ .+++ ++.|..+|..++.. ...+.
T Consensus 103 ~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~-~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~-----~~~~~--- 173 (401)
T 4aez_A 103 NLNVVAVALERNVYVWNADSGSVSALAETDES-TYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTK-----LRTMA--- 173 (401)
T ss_dssp TTSEEEEEETTEEEEEETTTCCEEEEEECCTT-CCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE-----EEEEC---
T ss_pred CCCEEEEECCCeEEEeeCCCCcEeEeeecCCC-CCEEEEEECCCCCEEEEECCCCeEEEEECcCCeE-----EEEec---
Confidence 34455555 778999998 7776654443221 23445556667664 4455 77888999877531 22221
Q ss_pred CCCCCCCeeEEEEEEcCCeEEEEEcCCeEEEEeCC--CcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEE
Q 006913 123 GKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTH--GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIY 200 (626)
Q Consensus 123 ~~~~~~~~I~s~~~d~dG~LwIgT~~gGL~a~d~~--G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~Lw 200 (626)
.... .+..+.. .+..+..++.++.|..+|.. +........ +. .. ...+...+.+..|.
T Consensus 174 --~~~~-~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~------------~~---~~-v~~~~~~~~~~~l~ 233 (401)
T 4aez_A 174 --GHQA-RVGCLSW-NRHVLSSGSRSGAIHHHDVRIANHQIGTLQG------------HS---SE-VCGLAWRSDGLQLA 233 (401)
T ss_dssp --CCSS-CEEEEEE-ETTEEEEEETTSEEEEEETTSSSCEEEEEEC------------CS---SC-EEEEEECTTSSEEE
T ss_pred --CCCC-ceEEEEE-CCCEEEEEcCCCCEEEEecccCcceeeEEcC------------CC---CC-eeEEEEcCCCCEEE
Confidence 1112 3333333 45678888888889999964 433332200 00 11 12334443245677
Q ss_pred EEcCCCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCC-eEEEEEc--CCCEEEEEECCCCcEEEEEecCCCCCceeeE
Q 006913 201 ISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNG-YLYVTIP--VRALVLALDTSSGNILWHKSVGPLGSAEYAP 277 (626)
Q Consensus 201 IGT~~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG-~LwVGT~--~gG~l~alD~~tG~~~w~~~~~~l~~~~ssp 277 (626)
.|+.++.|..+|.++++........ ...+.++....++ .+++... ..+.+..+|..+++........ ..+.++
T Consensus 234 s~~~d~~v~iwd~~~~~~~~~~~~~-~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~---~~v~~~ 309 (401)
T 4aez_A 234 SGGNDNVVQIWDARSSIPKFTKTNH-NAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAG---SQVTSL 309 (401)
T ss_dssp EEETTSCEEEEETTCSSEEEEECCC-SSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECS---SCEEEE
T ss_pred EEeCCCeEEEccCCCCCccEEecCC-cceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCC---CcEEEE
Confidence 8888899999999987766543311 2234555555544 4555332 3578889999899887766543 235556
Q ss_pred EEeeCCeEEEE---EcCCeEEEEcCC
Q 006913 278 VVDSNGWISVG---SLDGLLYSFSPS 300 (626)
Q Consensus 278 vvD~dG~IWVG---T~~gGLy~~d~~ 300 (626)
...++|...+. ..++.|..++..
T Consensus 310 ~~s~~~~~l~~~~g~~dg~i~v~~~~ 335 (401)
T 4aez_A 310 IWSPHSKEIMSTHGFPDNNLSIWSYS 335 (401)
T ss_dssp EECSSSSEEEEEECTTTCEEEEEEEE
T ss_pred EECCCCCeEEEEeecCCCcEEEEecC
Confidence 67666654443 357888888854
No 158
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=96.94 E-value=0.37 Score=47.81 Aligned_cols=226 Identities=11% Similarity=0.054 Sum_probs=115.8
Q ss_pred CEEEEEe--CCcEEEEcC--CCCEE--EEEeCCCCCCcccCeEEecCCe-EEEEE-C-CeEEEEECC--CCccccceeEE
Q 006913 48 GKIYACS--EKTLFAFES--NGTIA--WSLDLDFTCNIGTAPVHGGTGE-VYIVA-E-NRVLKVDLL--KIGTSESATQV 116 (626)
Q Consensus 48 G~IwIgS--dggL~a~d~--~G~~~--W~~~~~~~~~i~~sp~iD~dG~-IwVgT-~-ggL~~id~~--~~~~~~~~~~~ 116 (626)
..+|++. ++.+..++. +|... ...... .....+..+.+|+ ||++. + +.|..++.. ++.. ....
T Consensus 5 ~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~---~~~~ 78 (343)
T 1ri6_A 5 QTVYIASPESQQIHVWNLNHEGALTLTQVVDVP---GQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGAL---TFAA 78 (343)
T ss_dssp EEEEEEEGGGTEEEEEEECTTSCEEEEEEEECS---SCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCE---EEEE
T ss_pred EEEEEeCCCCCeEEEEEECCCCcEEEeeeEecC---CCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCce---eecc
Confidence 4567763 566777765 35432 222221 1234566677777 77776 3 778776654 4321 0011
Q ss_pred EecCCCCCCCCCCeeEEEEEEcCC-eEEEEEcC-CeEEEEeC-CCcEEEEECCcccccccccccccCCCCCccccceEEE
Q 006913 117 FYGTGSGKGGTGAIAGIAVSTSSS-SVYINVKG-RALFAFMT-HGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVID 193 (626)
Q Consensus 117 ~~~~~~~~~~~~~~I~s~~~d~dG-~LwIgT~~-gGL~a~d~-~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD 193 (626)
.+... . .+..+....+| .||++... +.|..++. +|....... .+. . ... ...+..+
T Consensus 79 ~~~~~------~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~----~~~--~-------~~~-~~~~~~s 137 (343)
T 1ri6_A 79 ESALP------G-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVD----VVE--G-------LDG-CHSANIS 137 (343)
T ss_dssp EEECS------S-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEE----EEC--C-------CTT-BCCCEEC
T ss_pred ccccC------C-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccc----ccc--C-------CCC-ceEEEEC
Confidence 11110 1 12223334455 47787763 45778876 333211110 000 0 001 1334555
Q ss_pred cCCCeEEEEc-CCCeEEEEeCCC-CeEEEEE----cCCCCCcceeeeeecCCe-EEEEEcCCCEEEEEEC--CCCcEEEE
Q 006913 194 QCEGSIYISN-TQGELYSLSAHS-PYFNWIQ----DLSSFDKAFTLTPGNNGY-LYVTIPVRALVLALDT--SSGNILWH 264 (626)
Q Consensus 194 ~~dG~LwIGT-~~GgL~~ld~~t-g~~~w~~----~~~s~~~v~sI~~D~dG~-LwVGT~~gG~l~alD~--~tG~~~w~ 264 (626)
+.+..||++. .++.|..+|.++ +++.... .......+..+..+.+|. ||++....+.+..++. .+|.....
T Consensus 138 ~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~ 217 (343)
T 1ri6_A 138 PDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECV 217 (343)
T ss_dssp TTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEE
T ss_pred CCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEE
Confidence 4234688887 677899988876 6553221 111112344566777775 8887755567777776 34554321
Q ss_pred --Ee-cCC-C--CCceeeEEEeeCC-eEEEEE-cCCeEEEEcCC
Q 006913 265 --KS-VGP-L--GSAEYAPVVDSNG-WISVGS-LDGLLYSFSPS 300 (626)
Q Consensus 265 --~~-~~~-l--~~~~sspvvD~dG-~IWVGT-~~gGLy~~d~~ 300 (626)
.. ... . ......+..+++| .||++. .++.|..++..
T Consensus 218 ~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 218 QTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVS 261 (343)
T ss_dssp EEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred eeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEc
Confidence 11 111 0 0123346777777 577766 46678888754
No 159
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=96.93 E-value=0.57 Score=49.87 Aligned_cols=240 Identities=14% Similarity=0.133 Sum_probs=132.2
Q ss_pred eEEeeCCE-EEEEe-----------CCcEEEEcC-CCCEEEEEeCCCC-----CCcccCeEEecCCe-EEEEE---CCeE
Q 006913 42 PLIGEDGK-IYACS-----------EKTLFAFES-NGTIAWSLDLDFT-----CNIGTAPVHGGTGE-VYIVA---ENRV 99 (626)
Q Consensus 42 pvid~dG~-IwIgS-----------dggL~a~d~-~G~~~W~~~~~~~-----~~i~~sp~iD~dG~-IwVgT---~ggL 99 (626)
+.+..+|+ +|++. ++.+..+|. +++..-.+..+.. ...-..+.++.+|+ +|++. .+.|
T Consensus 83 va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~V 162 (386)
T 3sjl_D 83 PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAV 162 (386)
T ss_dssp EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEE
T ss_pred EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeE
Confidence 66666664 88875 246899998 7877655544320 01123456777776 88875 3689
Q ss_pred EEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEcCCeEEEEeC-C-CcEEEEECCccccccccccc
Q 006913 100 LKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMT-H-GQLLWSAGPVLDQLGYRQGC 177 (626)
Q Consensus 100 ~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~~gGL~a~d~-~-G~~~w~~~~~~~~~~~~~~~ 177 (626)
..+|..+++. .-.+.. .+ .. .+.......++..+.++.+..++. . |+..-.... .+.
T Consensus 163 sVID~~t~~v-----v~tI~v------~g-~~-~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~---~~~----- 221 (386)
T 3sjl_D 163 GVVDLEGKAF-----KRMLDV------PD-CY-HIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTE---VFH----- 221 (386)
T ss_dssp EEEETTTTEE-----EEEEEC------CS-EE-EEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECC---CCS-----
T ss_pred EEEECCCCcE-----EEEEEC------CC-cc-eeecCCCceeEEECCCCCEEEEECCCCCeEEEeecc---eec-----
Confidence 9999988632 111110 01 11 111122233444455666666664 2 554221100 000
Q ss_pred ccCCCCCccccceEEEcCCCeEEEEcCCCeEEEEeCCCCeEEEEEcCC---------C--CCcceeeeeec-CCeEEEEE
Q 006913 178 TKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLS---------S--FDKAFTLTPGN-NGYLYVTI 245 (626)
Q Consensus 178 ~~~l~~~~i~sspviD~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~---------s--~~~v~sI~~D~-dG~LwVGT 245 (626)
.....+...+..+..+|++++.+.+|.++.+|..++......... . ......+.++. .++|||..
T Consensus 222 ---~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~ 298 (386)
T 3sjl_D 222 ---PEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLV 298 (386)
T ss_dssp ---CTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEE
T ss_pred ---cccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEe
Confidence 001122223444423777766677889999999876533211110 0 00111234443 45999986
Q ss_pred cC---------CCEEEEEECCCCcEEEEEecCCCCCceeeEEEeeCCe--EEEEEc-CCeEEEEcCC-CCEEEEee
Q 006913 246 PV---------RALVLALDTSSGNILWHKSVGPLGSAEYAPVVDSNGW--ISVGSL-DGLLYSFSPS-GVLNKFSK 308 (626)
Q Consensus 246 ~~---------gG~l~alD~~tG~~~w~~~~~~l~~~~sspvvD~dG~--IWVGT~-~gGLy~~d~~-g~~~~~~~ 308 (626)
.. +..+..+|.++++.+-....+. ...++.++.||. +|+... ++.|..+|.. ++.+....
T Consensus 299 ~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~---~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~ 371 (386)
T 3sjl_D 299 DQRDEWRHKTASRFVVVLDAKTGERLAKFEMGH---EIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVN 371 (386)
T ss_dssp EECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE---EECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEEC
T ss_pred ccccccccCCCCCEEEEEECCCCeEEEEEECCC---CcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEec
Confidence 31 2468899999999876655541 233577777774 666554 5789999974 77665443
No 160
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=96.93 E-value=0.47 Score=53.81 Aligned_cols=197 Identities=5% Similarity=-0.135 Sum_probs=108.9
Q ss_pred ccCeEEecCCeEE-EEE-CCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEE-EEcCCeEEEEEcCCeEEEEeC
Q 006913 80 GTAPVHGGTGEVY-IVA-ENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAV-STSSSSVYINVKGRALFAFMT 156 (626)
Q Consensus 80 ~~sp~iD~dG~Iw-VgT-~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~-~d~dG~LwIgT~~gGL~a~d~ 156 (626)
+.++....+|... ++. ++.|..+|..++.. ...+. .... .+..+. ...+..|.+++.++.|..+|.
T Consensus 16 v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~-----~~~~~-----~~~~-~v~~~~~s~~~~~l~~~~~dg~i~vw~~ 84 (814)
T 3mkq_A 16 VKGIDFHPTEPWVLTTLYSGRVEIWNYETQVE-----VRSIQ-----VTET-PVRAGKFIARKNWIIVGSDDFRIRVFNY 84 (814)
T ss_dssp EEEEEECSSSSEEEEEETTSEEEEEETTTTEE-----EEEEE-----CCSS-CEEEEEEEGGGTEEEEEETTSEEEEEET
T ss_pred eEEEEECCCCCEEEEEeCCCEEEEEECCCCce-----EEEEe-----cCCC-cEEEEEEeCCCCEEEEEeCCCeEEEEEC
Confidence 3345555666644 444 67788888776531 11111 1112 334433 344456778888888999996
Q ss_pred C-CcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcCCCeEEEEeCCCCeEEEEEcCCCCCcceeeee
Q 006913 157 H-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTP 235 (626)
Q Consensus 157 ~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~ 235 (626)
. |+....... + ... ..++...+.+..|..++.+|.|..+|.+++.............+.++..
T Consensus 85 ~~~~~~~~~~~------------~---~~~-v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~ 148 (814)
T 3mkq_A 85 NTGEKVVDFEA------------H---PDY-IRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAF 148 (814)
T ss_dssp TTCCEEEEEEC------------C---SSC-EEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEE
T ss_pred CCCcEEEEEec------------C---CCC-EEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEE
Confidence 4 776554310 0 011 1334444324457788888889999988762221111111223555555
Q ss_pred ec-CC-eEEEEEcCCCEEEEEECCCCcEEEEEecCCCCCceeeEEEee--C-CeEEEEEcCCeEEEEcCC-CCEEE
Q 006913 236 GN-NG-YLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPVVDS--N-GWISVGSLDGLLYSFSPS-GVLNK 305 (626)
Q Consensus 236 D~-dG-~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~~~sspvvD~--d-G~IWVGT~~gGLy~~d~~-g~~~~ 305 (626)
.. ++ .+.+++ .++.+..+|..++........... ..+..+...+ + ..+.+|+.++.|..+|.. ++...
T Consensus 149 ~p~~~~~l~~~~-~dg~v~vwd~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~ 222 (814)
T 3mkq_A 149 NPKDPSTFASGC-LDRTVKVWSLGQSTPNFTLTTGQE-RGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVA 222 (814)
T ss_dssp ETTEEEEEEEEE-TTSEEEEEETTCSSCSEEEECCCT-TCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEE
T ss_pred EcCCCCEEEEEe-CCCeEEEEECCCCcceeEEecCCC-CCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEE
Confidence 54 55 455555 457888888877766554433211 1223344433 3 467888888899999965 54433
No 161
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=96.92 E-value=0.3 Score=50.34 Aligned_cols=160 Identities=6% Similarity=-0.047 Sum_probs=88.3
Q ss_pred eEEEEEEcCCeEEEEEcCCeEEEEeCC-CcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcCCCeEE
Q 006913 131 AGIAVSTSSSSVYINVKGRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELY 209 (626)
Q Consensus 131 I~s~~~d~dG~LwIgT~~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~~GgL~ 209 (626)
|..+.-..++.|..|+.++-|..+|.+ ++....... ...+ + ... ..++...+.+..|..|+.++.|.
T Consensus 85 v~~~~~s~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~--~~~~------H---~~~-V~~v~~spdg~~l~sgs~d~~i~ 152 (344)
T 4gqb_B 85 VADLTWVGERGILVASDSGAVELWELDENETLIVSKF--CKYE------H---DDI-VSTVSVLSSGTQAVSGSKDICIK 152 (344)
T ss_dssp EEEEEEETTTEEEEEETTSEEEEEEECTTSSCEEEEE--EEEC------C---SSC-EEEEEECTTSSEEEEEETTSCEE
T ss_pred EEEEEEeCCCeEEEEECCCEEEEEeccCCCceeEeec--cccC------C---CCC-EEEEEECCCCCEEEEEeCCCeEE
Confidence 333444467788888888888888864 543322100 0000 0 011 23444544244567777888899
Q ss_pred EEeCCCCeEEEEEcCCCCCcceeeeeecCC-eEEEEEcCCCEEEEEECCCCcEEEEEecCCCCCceeeEEEee-CCe-EE
Q 006913 210 SLSAHSPYFNWIQDLSSFDKAFTLTPGNNG-YLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPVVDS-NGW-IS 286 (626)
Q Consensus 210 ~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG-~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~~~sspvvD~-dG~-IW 286 (626)
.+|.++++...... +....+.++....++ .+++....++.+...|..+++...............++...+ ++. +.
T Consensus 153 iwd~~~~~~~~~~~-~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~ 231 (344)
T 4gqb_B 153 VWDLAQQVVLSSYR-AHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFV 231 (344)
T ss_dssp EEETTTTEEEEEEC-CCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEE
T ss_pred EEECCCCcEEEEEc-CcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceE
Confidence 99999987765432 112345566555454 454433245678888988887665432221112234455543 344 55
Q ss_pred EEEcCCeEEEEcCC-CCE
Q 006913 287 VGSLDGLLYSFSPS-GVL 303 (626)
Q Consensus 287 VGT~~gGLy~~d~~-g~~ 303 (626)
.|+.++.|..+|.. ++.
T Consensus 232 sg~~dg~v~~wd~~~~~~ 249 (344)
T 4gqb_B 232 FGDENGTVSLVDTKSTSC 249 (344)
T ss_dssp EEETTSEEEEEESCC--C
T ss_pred EeccCCcEEEEECCCCcE
Confidence 67888889999964 443
No 162
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=96.92 E-value=0.44 Score=48.43 Aligned_cols=236 Identities=12% Similarity=-0.019 Sum_probs=122.0
Q ss_pred CC-EEEEEe-CCcEEEEcC-CCCEEEEEeCCCCCCcccCeEEe---cCCe-EEEEE-CCeEEEEECCCCccccceeEEEe
Q 006913 47 DG-KIYACS-EKTLFAFES-NGTIAWSLDLDFTCNIGTAPVHG---GTGE-VYIVA-ENRVLKVDLLKIGTSESATQVFY 118 (626)
Q Consensus 47 dG-~IwIgS-dggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD---~dG~-IwVgT-~ggL~~id~~~~~~~~~~~~~~~ 118 (626)
++ .+..++ ++.+..+|. ++.....+.... ....+... .++. +..++ ++.|..+|..++.. ...+
T Consensus 111 ~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~-----~~~~ 182 (408)
T 4a11_B 111 DTGMFTSSSFDKTLKVWDTNTLQTADVFNFEE---TVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSC-----SHIL 182 (408)
T ss_dssp CTTCEEEEETTSEEEEEETTTTEEEEEEECSS---CEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCC-----CEEE
T ss_pred CCcEEEEEeCCCeEEEeeCCCCccceeccCCC---ceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcce-----eeee
Confidence 44 355555 667888887 666555444322 11122221 2333 44555 78899999876531 1111
Q ss_pred cCCCCCCCCCCeeEEEEEEcCCe--EEEEEcCCeEEEEeCC-Cc-EEEEECCcccccccccccccCCCCCccccceEEEc
Q 006913 119 GTGSGKGGTGAIAGIAVSTSSSS--VYINVKGRALFAFMTH-GQ-LLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQ 194 (626)
Q Consensus 119 ~~~~~~~~~~~~I~s~~~d~dG~--LwIgT~~gGL~a~d~~-G~-~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~ 194 (626)
. .. ...+..+....++. +..++.++.|..+|.. +. .......................... ...+...+
T Consensus 183 ~-----~~-~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~ 255 (408)
T 4a11_B 183 Q-----GH-RQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGK-VNGLCFTS 255 (408)
T ss_dssp C-----CC-CSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSC-EEEEEECT
T ss_pred c-----CC-CCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCc-eeEEEEcC
Confidence 1 11 12344444444443 6677777888889864 33 22221000000000000000000111 23344544
Q ss_pred CCCeEEEEcCCCeEEEEeCCCCeEEEEEcCC----C-CCcceeeeeecCCeEEEEEcCCCEEEEEECCCCcEEEEEecCC
Q 006913 195 CEGSIYISNTQGELYSLSAHSPYFNWIQDLS----S-FDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGP 269 (626)
Q Consensus 195 ~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~----s-~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~ 269 (626)
.+..|+.++.++.|..+|.++++........ . .........+..+.+.++.. ++.+..+|..+++........
T Consensus 256 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~v~d~~~~~~~~~~~~~- 333 (408)
T 4a11_B 256 DGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPY-GSTIAVYTVYSGEQITMLKGH- 333 (408)
T ss_dssp TSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEE-TTEEEEEETTTCCEEEEECCC-
T ss_pred CCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEec-CCEEEEEECcCCcceeeeccC-
Confidence 2445778888888999999887643221110 0 11112223344455666653 578989999999887665322
Q ss_pred CCCceeeEEEeeCC-eEEEEEcCCeEEEEcCC
Q 006913 270 LGSAEYAPVVDSNG-WISVGSLDGLLYSFSPS 300 (626)
Q Consensus 270 l~~~~sspvvD~dG-~IWVGT~~gGLy~~d~~ 300 (626)
...+..+...++| .|..|+.++.|..++..
T Consensus 334 -~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~ 364 (408)
T 4a11_B 334 -YKTVDCCVFQSNFQELYSGSRDCNILAWVPS 364 (408)
T ss_dssp -SSCEEEEEEETTTTEEEEEETTSCEEEEEEC
T ss_pred -CCeEEEEEEcCCCCEEEEECCCCeEEEEeCC
Confidence 1234556677665 47778888889999864
No 163
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=96.89 E-value=0.68 Score=50.17 Aligned_cols=236 Identities=10% Similarity=0.012 Sum_probs=130.4
Q ss_pred eeeeEEee--CCEEEE-Ee-CCcEEEEcC-CC--------CEEEEEeCCCCCCcccCeEEecCCeEEEE-EC-----CeE
Q 006913 39 LSKPLIGE--DGKIYA-CS-EKTLFAFES-NG--------TIAWSLDLDFTCNIGTAPVHGGTGEVYIV-AE-----NRV 99 (626)
Q Consensus 39 ~Sspvid~--dG~IwI-gS-dggL~a~d~-~G--------~~~W~~~~~~~~~i~~sp~iD~dG~IwVg-T~-----ggL 99 (626)
........ +|.+.+ |+ ++.+..+|. ++ .....+.... ..+.++....+|...+. +. +.|
T Consensus 67 v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~s~~~~~l~~~~~~~~~~~~v 144 (615)
T 1pgu_A 67 VTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLA--GPISDISWDFEGRRLCVVGEGRDNFGVF 144 (615)
T ss_dssp EEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCS--SCEEEEEECTTSSEEEEEECCSSCSEEE
T ss_pred EEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhccc--ccEEEEEEeCCCCEEEEeccCCCCccEE
Confidence 45555556 666544 45 556777776 44 2222222111 23445556677775544 33 345
Q ss_pred EEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEcCC--eEEEEEcCCeEEEEeCC-CcEEEEECCcccccccccc
Q 006913 100 LKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSS--SVYINVKGRALFAFMTH-GQLLWSAGPVLDQLGYRQG 176 (626)
Q Consensus 100 ~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG--~LwIgT~~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~ 176 (626)
+.++... ....+. .. ...+..+....++ .+..++.++.+..+|.. ++.......
T Consensus 145 ~~~d~~~-------~~~~~~-----~~-~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~---------- 201 (615)
T 1pgu_A 145 ISWDSGN-------SLGEVS-----GH-SQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRT---------- 201 (615)
T ss_dssp EETTTCC-------EEEECC-----SC-SSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECS----------
T ss_pred EEEECCC-------cceeee-----cC-CccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecc----------
Confidence 5555221 111111 11 2234444444555 57777888888999965 665544310
Q ss_pred cccCCCCCccccceEEEcC-CCeEEEEcCCCeEEEEeCCCCeEEEEEcC---CCCCcceeeeeecCCe-EEEEEcCCCEE
Q 006913 177 CTKTDVDCYFTSVPVIDQC-EGSIYISNTQGELYSLSAHSPYFNWIQDL---SSFDKAFTLTPGNNGY-LYVTIPVRALV 251 (626)
Q Consensus 177 ~~~~l~~~~i~sspviD~~-dG~LwIGT~~GgL~~ld~~tg~~~w~~~~---~s~~~v~sI~~D~dG~-LwVGT~~gG~l 251 (626)
+...... ..++...+. +..|+.++.++.|..+|.++++....... .....+.++... ++. |+.++ .++.+
T Consensus 202 --~~~~~~~-v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~-~d~~i 276 (615)
T 1pgu_A 202 --HHKQGSF-VRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVG-ADATI 276 (615)
T ss_dssp --SSCTTCC-EEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEE-TTSEE
T ss_pred --cCCCCce-EEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEc-CCCcE
Confidence 0000001 233455542 34577788888999999988877655411 222345566665 664 55555 45788
Q ss_pred EEEECCCCcEEEEEecCC--CCCceeeEEEeeCCeEEEEEcCCeEEEEcCC-CCEE
Q 006913 252 LALDTSSGNILWHKSVGP--LGSAEYAPVVDSNGWISVGSLDGLLYSFSPS-GVLN 304 (626)
Q Consensus 252 ~alD~~tG~~~w~~~~~~--l~~~~sspvvD~dG~IWVGT~~gGLy~~d~~-g~~~ 304 (626)
..+|..+++......... .......+....++.+.+|+.++.|+.++.. ++..
T Consensus 277 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~ 332 (615)
T 1pgu_A 277 RVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVL 332 (615)
T ss_dssp EEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEE
T ss_pred EEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEE
Confidence 889998888776654431 1112233334457889999999999999975 4433
No 164
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=96.88 E-value=0.49 Score=48.98 Aligned_cols=103 Identities=10% Similarity=0.067 Sum_probs=67.2
Q ss_pred CeEEEEcCCCeEEEEeCCCCeEEEEEc-CCCCCcceeeeeecCCe-EEEEEcCCCEEEEEECCCCcEEEEEecCCCCCce
Q 006913 197 GSIYISNTQGELYSLSAHSPYFNWIQD-LSSFDKAFTLTPGNNGY-LYVTIPVRALVLALDTSSGNILWHKSVGPLGSAE 274 (626)
Q Consensus 197 G~LwIGT~~GgL~~ld~~tg~~~w~~~-~~s~~~v~sI~~D~dG~-LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~~~ 274 (626)
..|..|+.++.|..+|.++++...... ......+.++....+|. |..+. .++.+..+|..+++..........+...
T Consensus 145 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 223 (402)
T 2aq5_A 145 NVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSC-RDKRVRVIEPRKGTVVAEKDRPHEGTRP 223 (402)
T ss_dssp TEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEE-TTSEEEEEETTTTEEEEEEECSSCSSSC
T ss_pred CEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEe-cCCcEEEEeCCCCceeeeeccCCCCCcc
Confidence 357777888889999999987765542 11223466666666775 55555 5678999999998877655222111223
Q ss_pred eeEEEeeCCeEEEEE----cCCeEEEEcCC
Q 006913 275 YAPVVDSNGWISVGS----LDGLLYSFSPS 300 (626)
Q Consensus 275 sspvvD~dG~IWVGT----~~gGLy~~d~~ 300 (626)
..+...++|.+.+.. .++.|..+|..
T Consensus 224 ~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~ 253 (402)
T 2aq5_A 224 VHAVFVSEGKILTTGFSRMSERQVALWDTK 253 (402)
T ss_dssp CEEEECSTTEEEEEEECTTCCEEEEEEETT
T ss_pred eEEEEcCCCcEEEEeccCCCCceEEEEcCc
Confidence 445666677766554 67788888864
No 165
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=96.85 E-value=0.45 Score=47.45 Aligned_cols=236 Identities=9% Similarity=-0.058 Sum_probs=127.5
Q ss_pred eeeeEEeeCCEEEE-Ee-CCcEEEEcC-CCCEEEEEeCCCCCCcccCeEEecCCeE-EEEE-CCeEEEEECCCCccccce
Q 006913 39 LSKPLIGEDGKIYA-CS-EKTLFAFES-NGTIAWSLDLDFTCNIGTAPVHGGTGEV-YIVA-ENRVLKVDLLKIGTSESA 113 (626)
Q Consensus 39 ~Sspvid~dG~IwI-gS-dggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~dG~I-wVgT-~ggL~~id~~~~~~~~~~ 113 (626)
.......++|.+.+ ++ ++.+..+|. ++.....+.... ..+.+.....++++ ..|+ ++.|..+|..++..
T Consensus 16 V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~---- 89 (304)
T 2ynn_A 16 VKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTE--TPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEK---- 89 (304)
T ss_dssp EEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCS--SCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCE----
T ss_pred eEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccC--CcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcE----
Confidence 34444546666544 44 567888887 666554443321 12333444455654 4455 67888889887631
Q ss_pred eEEEecCCCCCCCCCCeeEEEEEEcCC-eEEEEEcCCeEEEEeCC-CcEEEE-ECCcccccccccccccCCCCCccccce
Q 006913 114 TQVFYGTGSGKGGTGAIAGIAVSTSSS-SVYINVKGRALFAFMTH-GQLLWS-AGPVLDQLGYRQGCTKTDVDCYFTSVP 190 (626)
Q Consensus 114 ~~~~~~~~~~~~~~~~~I~s~~~d~dG-~LwIgT~~gGL~a~d~~-G~~~w~-~~~~~~~~~~~~~~~~~l~~~~i~ssp 190 (626)
...+. ... ..|..+....++ .|..|+.++.|..+|.. +..... +. + + ... ..+.
T Consensus 90 -~~~~~-----~h~-~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~------~------h---~~~-v~~v 146 (304)
T 2ynn_A 90 -VVDFE-----AHP-DYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFE------G------H---EHF-VMCV 146 (304)
T ss_dssp -EEEEE-----CCS-SCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEEC------C------C---CSC-EEEE
T ss_pred -EEEEe-----CCC-CcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhc------c------c---CCc-EEEE
Confidence 22221 111 234444444444 56667778888888864 533221 10 0 0 011 1233
Q ss_pred EEEcC-CCeEEEEcCCCeEEEEeCCCCeEEEEEcCCCCCcceee--eeecCC-eEEEEEcCCCEEEEEECCCCcEEEEEe
Q 006913 191 VIDQC-EGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTL--TPGNNG-YLYVTIPVRALVLALDTSSGNILWHKS 266 (626)
Q Consensus 191 viD~~-dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s~~~v~sI--~~D~dG-~LwVGT~~gG~l~alD~~tG~~~w~~~ 266 (626)
...+. ...|..|..++.|..+|..++.............+..+ ....++ .|..|+ .++.+...|..+++......
T Consensus 147 ~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s-~D~~i~iWd~~~~~~~~~~~ 225 (304)
T 2ynn_A 147 AFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITAS-DDLTIKIWDYQTKSCVATLE 225 (304)
T ss_dssp EECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEE-TTSEEEEEETTTTEEEEEEE
T ss_pred EECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEc-CCCeEEEEeCCCCccceeeC
Confidence 44321 34577788888899999876544333221111122222 223355 455555 45788889988887765543
Q ss_pred cCCCCCceeeEEEeeCC-eEEEEEcCCeEEEEcCC-CCEEEE
Q 006913 267 VGPLGSAEYAPVVDSNG-WISVGSLDGLLYSFSPS-GVLNKF 306 (626)
Q Consensus 267 ~~~l~~~~sspvvD~dG-~IWVGT~~gGLy~~d~~-g~~~~~ 306 (626)
.. ...+......+++ .|..|+.++.|..+|.. ++....
T Consensus 226 ~h--~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~ 265 (304)
T 2ynn_A 226 GH--MSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKT 265 (304)
T ss_dssp CC--SSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEE
T ss_pred CC--CCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeee
Confidence 22 1234445666665 46667888899999975 555443
No 166
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.81 E-value=0.32 Score=51.08 Aligned_cols=230 Identities=11% Similarity=0.050 Sum_probs=121.6
Q ss_pred CceeeeeEEeeCCEEEEEe--CCcEEEEcC-CCCEEEEEeCCC---C-CCcccCeEEec----CCeEEEE-E---CCeEE
Q 006913 36 AFRLSKPLIGEDGKIYACS--EKTLFAFES-NGTIAWSLDLDF---T-CNIGTAPVHGG----TGEVYIV-A---ENRVL 100 (626)
Q Consensus 36 ~~~~Sspvid~dG~IwIgS--dggL~a~d~-~G~~~W~~~~~~---~-~~i~~sp~iD~----dG~IwVg-T---~ggL~ 100 (626)
...-..+++..+|+||++. .+.|++++. +|...-...++. . ..-...+.++. ++.||+. + .+.|.
T Consensus 31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~ 110 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIV 110 (347)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEE
T ss_pred CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEE
Confidence 3344466777899999987 467999987 565421111210 0 01123455654 5889996 2 56898
Q ss_pred EEECCCC-----ccccceeEEE-ecCCCCCCCCCCeeEEEEEEcCCeEEEEEc--------------CCeEEEEeCCCcE
Q 006913 101 KVDLLKI-----GTSESATQVF-YGTGSGKGGTGAIAGIAVSTSSSSVYINVK--------------GRALFAFMTHGQL 160 (626)
Q Consensus 101 ~id~~~~-----~~~~~~~~~~-~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~--------------~gGL~a~d~~G~~ 160 (626)
++..... ........+. .... ..+ ..+.+..+.+|.||+++- .+.|++++++|++
T Consensus 111 R~~~~~~~~~~~~~~~~~~i~~~~p~~--~~H---~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~i 185 (347)
T 3das_A 111 RMLYDEKKPSGEQLGAPDTVFRGIPKG--VIH---NGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEP 185 (347)
T ss_dssp EEEBCTTSCTTCCBCCCEEEEEEECCC--SSC---CCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSB
T ss_pred EEEeCCCCcccccCCCcEEEEEcCCCC--CCc---cCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCc
Confidence 8876552 1111111221 1111 111 112345578999999852 3678888887652
Q ss_pred ----------EEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcCC----CeEEEEeCCCCeEEEEEcCC-
Q 006913 161 ----------LWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQ----GELYSLSAHSPYFNWIQDLS- 225 (626)
Q Consensus 161 ----------~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~~----GgL~~ld~~tg~~~w~~~~~- 225 (626)
+|.+ +.+. ...+..|. +|.||++... ..|..+. .++.+-|-...+
T Consensus 186 p~~nPf~~~~i~a~-------G~RN-----------p~Gla~dp-~G~L~~~d~g~~~~deln~i~-~G~nyGwP~~~g~ 245 (347)
T 3das_A 186 APGNPFPGSPVYSY-------GHRN-----------VQGLAWDD-KQRLFASEFGQDTWDELNAIK-PGDNYGWPEAEGK 245 (347)
T ss_dssp CTTCSSTTCCEEEB-------CCSB-----------CCEEEECT-TCCEEEEECCSSSCEEEEEEC-TTCBCCTTTCCSS
T ss_pred cCCCCCCCCeEEee-------CCCC-----------cceEEECC-CCCEEEEecCCCCCceeeEEc-CCCEecCCcccCC
Confidence 3322 1111 12256676 7999998652 2355553 344443421100
Q ss_pred ----CC-----------CcceeeeeecCCeEEEEEcCCCEEEEEECCCCcEE--EEEecCCCCCceeeEEEeeCCeEEEE
Q 006913 226 ----SF-----------DKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNIL--WHKSVGPLGSAEYAPVVDSNGWISVG 288 (626)
Q Consensus 226 ----s~-----------~~v~sI~~D~dG~LwVGT~~gG~l~alD~~tG~~~--w~~~~~~l~~~~sspvvD~dG~IWVG 288 (626)
.. .....++. .+|.+|++...+..++.+....+... ....+.........+.+++||.|||.
T Consensus 246 ~~~~~~~~P~~~~~~~~~ap~G~~~-~~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~ 324 (347)
T 3das_A 246 GGGSGFHDPVAQWSTDEASPSGIAY-AEGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLV 324 (347)
T ss_dssp CCCTTCCCCSEEECTTTCCEEEEEE-ETTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEE
T ss_pred CCCccccCCcEecCCCCCCCcceEE-EcCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEE
Confidence 00 01112233 36899999876666766654433221 11111111112456788899999999
Q ss_pred EcC
Q 006913 289 SLD 291 (626)
Q Consensus 289 T~~ 291 (626)
|.+
T Consensus 325 td~ 327 (347)
T 3das_A 325 TSN 327 (347)
T ss_dssp ECT
T ss_pred EcC
Confidence 964
No 167
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=96.80 E-value=0.32 Score=50.07 Aligned_cols=158 Identities=6% Similarity=-0.093 Sum_probs=84.5
Q ss_pred eEEEEEEcCCeEEEEEcCCeEEEEeCC-CcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcCCCeEE
Q 006913 131 AGIAVSTSSSSVYINVKGRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELY 209 (626)
Q Consensus 131 I~s~~~d~dG~LwIgT~~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~~GgL~ 209 (626)
|..+.-..++.+.+++.++.|..+|.. ++..... .+. .. .+ ... ..++...+.+..|..|..++.|.
T Consensus 97 V~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~~~~~-----~~~-~~--~h---~~~-V~~v~~spdg~~l~sgs~dg~v~ 164 (357)
T 4g56_B 97 VTDVAWVSEKGILVASDSGAVELWEILEKESLLVN-----KFA-KY--EH---DDI-VKTLSVFSDGTQAVSGGKDFSVK 164 (357)
T ss_dssp EEEEEEETTTEEEEEETTSCEEEC--------CCC-----CEE-EC--CC---SSC-EEEEEECSSSSEEEEEETTSCEE
T ss_pred EEEEEEcCCCCEEEEECCCEEEEeeccccceeEEE-----eec-cC--CC---CCC-EEEEEECCCCCEEEEEeCCCeEE
Confidence 444445577888888888778777753 4332110 000 00 00 011 23344444234566777888899
Q ss_pred EEeCCCCeEEEEEcCCCCCcceeeeeecCC--eEEEEEcCCCEEEEEECCCCcEEEEEecCCCCCceeeEEEeeC-C-eE
Q 006913 210 SLSAHSPYFNWIQDLSSFDKAFTLTPGNNG--YLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPVVDSN-G-WI 285 (626)
Q Consensus 210 ~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG--~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~~~sspvvD~d-G-~I 285 (626)
.+|.++++........ ...+.++....++ .+..+. .++.+...|..+++.............+.++...++ + .+
T Consensus 165 iwd~~~~~~~~~~~~h-~~~v~~v~~s~~~~~~~~s~~-~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~l 242 (357)
T 4g56_B 165 VWDLSQKAVLKSYNAH-SSEVNCVAACPGKDTIFLSCG-EDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTF 242 (357)
T ss_dssp EEETTTTEEEEEECCC-SSCEEEEEECTTCSSCEEEEE-TTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEE
T ss_pred EEECCCCcEEEEEcCC-CCCEEEEEEccCCCceeeeec-cCCceEEEECCCCceeeeeeeccccccccchhhhhcccceE
Confidence 9999998876554321 2335555554443 455555 456777788777765432222111122444555433 3 46
Q ss_pred EEEEcCCeEEEEcCC-CC
Q 006913 286 SVGSLDGLLYSFSPS-GV 302 (626)
Q Consensus 286 WVGT~~gGLy~~d~~-g~ 302 (626)
..|+.++.|..+|.. ++
T Consensus 243 a~g~~d~~i~~wd~~~~~ 260 (357)
T 4g56_B 243 ACGDETGNVSLVNIKNPD 260 (357)
T ss_dssp EEEESSSCEEEEESSCGG
T ss_pred EEeecccceeEEECCCCc
Confidence 678888899999864 44
No 168
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=96.78 E-value=0.63 Score=48.09 Aligned_cols=282 Identities=9% Similarity=-0.021 Sum_probs=142.5
Q ss_pred eEEeeCCEEE-EEe-CCcEEEEcC-CCCEEEEEeCCCCCCcccCeEEecCCeEEEEE--CCeEEEEECCCCccccceeEE
Q 006913 42 PLIGEDGKIY-ACS-EKTLFAFES-NGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVA--ENRVLKVDLLKIGTSESATQV 116 (626)
Q Consensus 42 pvid~dG~Iw-IgS-dggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~dG~IwVgT--~ggL~~id~~~~~~~~~~~~~ 116 (626)
.....+|... .|+ ++.+..+|. ++.....+.... ..+.++....+|+..+.. ++.+..++.............
T Consensus 72 ~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~--~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~ 149 (380)
T 3iz6_a 72 LDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHC--PWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPV 149 (380)
T ss_dssp EEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCC--TTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTT
T ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCC--CCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccc
Confidence 3333556544 455 567888887 666554443321 234455666778765543 677777776542100000000
Q ss_pred EecCCCCCCCCCCeeEEEEEE-cCCeEEEEEcCCeEEEEeCC-CcEEEEECCcccccccccccccCCCCCccccceEEEc
Q 006913 117 FYGTGSGKGGTGAIAGIAVST-SSSSVYINVKGRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQ 194 (626)
Q Consensus 117 ~~~~~~~~~~~~~~I~s~~~d-~dG~LwIgT~~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~ 194 (626)
. .......+.+....... .+..|..|+.++.+..+|.. |+.+..+.. .+ .. .. ...+ .+....+
T Consensus 150 ~---~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~---~~--~~----~h-~~~v-~~~~~~~ 215 (380)
T 3iz6_a 150 S---RVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGS---EF--PS----GH-TADV-LSLSINS 215 (380)
T ss_dssp C---CBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECC---CS--SS----SC-CSCE-EEEEECS
T ss_pred e---eeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeec---cc--CC----CC-ccCe-EEEEeec
Confidence 0 00001111111111222 23457778888889999974 766544311 00 00 00 0111 2222321
Q ss_pred -CCCeEEEEcCCCeEEEEeCCCC-eEEEEEcCCCCCcceeeeeecCCeEEEEEcCCCEEEEEECCCCcEEEEEecCCC--
Q 006913 195 -CEGSIYISNTQGELYSLSAHSP-YFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPL-- 270 (626)
Q Consensus 195 -~dG~LwIGT~~GgL~~ld~~tg-~~~w~~~~~s~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l-- 270 (626)
.++.+..|+.++.|..+|.+.. ....... +....+.++....+|...+....++.+...|..++.....+.....
T Consensus 216 ~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~-~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~ 294 (380)
T 3iz6_a 216 LNANMFISGSCDTTVRLWDLRITSRAVRTYH-GHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRN 294 (380)
T ss_dssp SSCCEEEEEETTSCEEEEETTTTCCCCEEEC-CCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSS
T ss_pred CCCCEEEEEECCCeEEEEECCCCCcceEEEC-CcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEeccccccc
Confidence 1345667777888999998632 2222111 1123456666667776555444567888899988887655432210
Q ss_pred ---CCceeeEEEeeCC-eEEEEEcCCeEEEEcCC-CCEEEEeeccCCCCccccCceEEEEEEecCCcEEEEEeeecCeeE
Q 006913 271 ---GSAEYAPVVDSNG-WISVGSLDGLLYSFSPS-GVLNKFSKSDTSDSVIQSSPYWFHLLGPSIGLKAILCLMVVGQFS 345 (626)
Q Consensus 271 ---~~~~sspvvD~dG-~IWVGT~~gGLy~~d~~-g~~~~~~~~~~~~~~ilssp~V~~Il~DsdG~IwI~T~t~~Ggl~ 345 (626)
...+.++...++| .|..|+.++.|+.+|.. ++........ .. .....|.++....+|... .+++..|.+.
T Consensus 295 ~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~-~~---~h~~~v~~l~~s~dg~~l-~sgs~D~~i~ 369 (380)
T 3iz6_a 295 DNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTL-QN---SHEGRISCLGLSSDGSAL-CTGSWDKNLK 369 (380)
T ss_dssp CCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCS-CS---SCCCCCCEEEECSSSSEE-EEECTTSCEE
T ss_pred ccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecc-cC---CCCCceEEEEECCCCCEE-EEeeCCCCEE
Confidence 0123456666665 56677788899999964 5544322110 00 122334556666667653 5555444443
No 169
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=96.73 E-value=0.74 Score=48.23 Aligned_cols=227 Identities=11% Similarity=-0.054 Sum_probs=123.6
Q ss_pred CeEEecCCeEEEE-E-CCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEcCC-eEEEEEcCCeEEEEeCC-
Q 006913 82 APVHGGTGEVYIV-A-ENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSS-SVYINVKGRALFAFMTH- 157 (626)
Q Consensus 82 sp~iD~dG~IwVg-T-~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG-~LwIgT~~gGL~a~d~~- 157 (626)
++....++.+.+. + ++.|..+|..++.. ...+. .... .|..+....++ .|..|+.++-|..+|..
T Consensus 113 ~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~-----~~~l~-----~h~~-~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~ 181 (410)
T 1vyh_C 113 RVIFHPVFSVMVSASEDATIKVWDYETGDF-----ERTLK-----GHTD-SVQDISFDHSGKLLASCSADMTIKLWDFQG 181 (410)
T ss_dssp EEEECSSSSEEEEEESSSCEEEEETTTCCC-----CEEEC-----CCSS-CEEEEEECTTSSEEEEEETTSCCCEEETTS
T ss_pred EEEEcCCCCEEEEEeCCCeEEEEECCCCcE-----EEEEe-----ccCC-cEEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Confidence 3445566665554 3 67888889877532 11111 1112 34444444444 45566777778888865
Q ss_pred CcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcCCCeEEEEeCCCCeEEEEEcCCCCCcceeeeeec
Q 006913 158 GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGN 237 (626)
Q Consensus 158 G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~ 237 (626)
++.+..+. + + ... ..+....+.+..|..|+.++.|..+|.+++........ ....+..+....
T Consensus 182 ~~~~~~~~------~------h---~~~-V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~-h~~~v~~~~~~~ 244 (410)
T 1vyh_C 182 FECIRTMH------G------H---DHN-VSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG-HREWVRMVRPNQ 244 (410)
T ss_dssp SCEEECCC------C------C---SSC-EEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEECT
T ss_pred CceeEEEc------C------C---CCC-EEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeC-CCccEEEEEECC
Confidence 55433210 0 0 011 23344443245677788899999999998876543221 122355566666
Q ss_pred CCeEEEEEcCCCEEEEEECCCCcEEEEEecCCCCCceeeEEEee---------------------CCeEEEEEcCCeEEE
Q 006913 238 NGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPVVDS---------------------NGWISVGSLDGLLYS 296 (626)
Q Consensus 238 dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~~~sspvvD~---------------------dG~IWVGT~~gGLy~ 296 (626)
+|.+.+....++.+...|..++......... ...+.++...+ ...+..|+.++.|..
T Consensus 245 ~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~i 322 (410)
T 1vyh_C 245 DGTLIASCSNDQTVRVWVVATKECKAELREH--RHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKM 322 (410)
T ss_dssp TSSEEEEEETTSCEEEEETTTCCEEEEECCC--SSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCceeeEecCC--CceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEE
Confidence 7765544434567878888887765443221 11233333332 235788888999999
Q ss_pred EcCC-CCEEEEeeccCCCCccccCceEEEEEEecCCcEEEEEeeecCeeEEe
Q 006913 297 FSPS-GVLNKFSKSDTSDSVIQSSPYWFHLLGPSIGLKAILCLMVVGQFSSL 347 (626)
Q Consensus 297 ~d~~-g~~~~~~~~~~~~~~ilssp~V~~Il~DsdG~IwI~T~t~~Ggl~~~ 347 (626)
+|.. ++...... .....|.++....+|... .++...|.+..+
T Consensus 323 wd~~~~~~~~~~~--------~h~~~v~~v~~~~~g~~l-~s~s~D~~i~vw 365 (410)
T 1vyh_C 323 WDVSTGMCLMTLV--------GHDNWVRGVLFHSGGKFI-LSCADDKTLRVW 365 (410)
T ss_dssp EETTTTEEEEEEE--------CCSSCEEEEEECSSSSCE-EEEETTTEEEEE
T ss_pred EECCCCceEEEEE--------CCCCcEEEEEEcCCCCEE-EEEeCCCeEEEE
Confidence 9975 55443222 012235556555666543 444444545443
No 170
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=96.72 E-value=0.51 Score=52.18 Aligned_cols=191 Identities=7% Similarity=-0.075 Sum_probs=115.5
Q ss_pred EecCCeEEEEE--CCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEcC-CeEEEEEcCCeEEEEeC--C-C
Q 006913 85 HGGTGEVYIVA--ENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSS-SSVYINVKGRALFAFMT--H-G 158 (626)
Q Consensus 85 iD~dG~IwVgT--~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~d-G~LwIgT~~gGL~a~d~--~-G 158 (626)
.+.++.+|+.. ++.|..+|..++.. ...+.. +..+..+....+ ..||+++.++.|..+|. . +
T Consensus 145 ~~p~~~~~vs~~~d~~V~v~D~~t~~~-----~~~i~~-------g~~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~ 212 (543)
T 1nir_A 145 LDLPNLFSVTLRDAGQIALVDGDSKKI-----VKVIDT-------GYAVHISRMSASGRYLLVIGRDARIDMIDLWAKEP 212 (543)
T ss_dssp CCGGGEEEEEEGGGTEEEEEETTTCCE-----EEEEEC-------STTEEEEEECTTSCEEEEEETTSEEEEEETTSSSC
T ss_pred cCCCCEEEEEEcCCCeEEEEECCCceE-----EEEEec-------CcccceEEECCCCCEEEEECCCCeEEEEECcCCCC
Confidence 45678888876 67899999887642 112211 111344444444 46899988888999998 4 6
Q ss_pred cEEEEECCcccccccccccccCCCCCccccceEEEc----CCCeEEEEcC-CCeEEEEeCCCCeEEEEEcCCC-------
Q 006913 159 QLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQ----CEGSIYISNT-QGELYSLSAHSPYFNWIQDLSS------- 226 (626)
Q Consensus 159 ~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~----~dG~LwIGT~-~GgL~~ld~~tg~~~w~~~~~s------- 226 (626)
+.+.... . +.. ...+.+.+ .+..||++++ ++.|..+|..+++........+
T Consensus 213 ~~~~~i~---------~-------g~~-p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~ 275 (543)
T 1nir_A 213 TKVAEIK---------I-------GIE-ARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQT 275 (543)
T ss_dssp EEEEEEE---------C-------CSE-EEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCC
T ss_pred cEEEEEe---------c-------CCC-cceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccc
Confidence 5544320 0 001 12344543 3677999985 6889999999988766544311
Q ss_pred ---CCcceeeeeecCC-eEEEEEcCCCEEEEEECCCCcEEE--EEecCCCCCceeeEEEeeCCe-EEEEEc-CCeEEEEc
Q 006913 227 ---FDKAFTLTPGNNG-YLYVTIPVRALVLALDTSSGNILW--HKSVGPLGSAEYAPVVDSNGW-ISVGSL-DGLLYSFS 298 (626)
Q Consensus 227 ---~~~v~sI~~D~dG-~LwVGT~~gG~l~alD~~tG~~~w--~~~~~~l~~~~sspvvD~dG~-IWVGT~-~gGLy~~d 298 (626)
...+..++...++ .+++.....+.+..+|..+++.+. ....+ .......++++|+ ++++.. ++.|..+|
T Consensus 276 ~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~---~~~~~~~~spdg~~l~va~~~~~~v~v~D 352 (543)
T 1nir_A 276 YHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAA---PFLHDGGWDSSHRYFMTAANNSNKVAVID 352 (543)
T ss_dssp EESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECC---SSCCCEEECTTSCEEEEEEGGGTEEEEEE
T ss_pred cccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccC---cCccCceECCCCCEEEEEecCCCeEEEEE
Confidence 1134456666555 555555555788888877665332 22222 2334567788887 676654 67899999
Q ss_pred CC-CCEEEEe
Q 006913 299 PS-GVLNKFS 307 (626)
Q Consensus 299 ~~-g~~~~~~ 307 (626)
.. ++.....
T Consensus 353 ~~tg~l~~~i 362 (543)
T 1nir_A 353 SKDRRLSALV 362 (543)
T ss_dssp TTTTEEEEEE
T ss_pred CCCCeEEEee
Confidence 75 6655443
No 171
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=96.70 E-value=0.75 Score=49.56 Aligned_cols=250 Identities=11% Similarity=0.057 Sum_probs=133.5
Q ss_pred CCEEEEEeC------CcEEEEcC-CCCEEEEEeCCCCCCcccCeEEecCCe-EEEEE-----------CCeEEEEECCCC
Q 006913 47 DGKIYACSE------KTLFAFES-NGTIAWSLDLDFTCNIGTAPVHGGTGE-VYIVA-----------ENRVLKVDLLKI 107 (626)
Q Consensus 47 dG~IwIgSd------ggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~dG~-IwVgT-----------~ggL~~id~~~~ 107 (626)
...+|+... +.+..+|. +++.+..++.+.. - .+.++.+|+ +|++. ++.|..||..++
T Consensus 84 ~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~---P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 84 ARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFL---P-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp TTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSS---C-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCC---C-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 357999873 57999998 8888887776532 2 566777776 88874 246999999886
Q ss_pred ccccceeEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEc--CCeEEEEeCC-CcEEEEECCc----ccccc---ccccc
Q 006913 108 GTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVK--GRALFAFMTH-GQLLWSAGPV----LDQLG---YRQGC 177 (626)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~--~gGL~a~d~~-G~~~w~~~~~----~~~~~---~~~~~ 177 (626)
+. ...+..+...............+...+..+|++.. .+.|..+|.. ++++..+.-. ....+ +-..|
T Consensus 160 ~v---v~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~ 236 (426)
T 3c75_H 160 LP---IADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNC 236 (426)
T ss_dssp CE---EEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEE
T ss_pred cE---EEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEc
Confidence 42 01122220000000001112222234457888764 3668899974 6665443100 00000 00000
Q ss_pred ccC------CC---------------CCccccceEEEcCCCeEEEEcCCCeEEEEeCCCCeEEEEEc--C--C-C--C--
Q 006913 178 TKT------DV---------------DCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQD--L--S-S--F-- 227 (626)
Q Consensus 178 ~~~------l~---------------~~~i~sspviD~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~--~--~-s--~-- 227 (626)
..+ .. ...+...+.+...++.+|+.+..+.++.+|..++....... . . . .
T Consensus 237 ~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~ 316 (426)
T 3c75_H 237 RDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDW 316 (426)
T ss_dssp TTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTE
T ss_pred CCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeecccccccccc
Confidence 000 00 00000011223224667887777889999887655432111 0 0 0 0
Q ss_pred --CcceeeeeecC-CeEEEEEcC---------CCEEEEEECCCCcEEEEEecCCCCCceeeEEEeeCCe--EEEEEc-CC
Q 006913 228 --DKAFTLTPGNN-GYLYVTIPV---------RALVLALDTSSGNILWHKSVGPLGSAEYAPVVDSNGW--ISVGSL-DG 292 (626)
Q Consensus 228 --~~v~sI~~D~d-G~LwVGT~~---------gG~l~alD~~tG~~~w~~~~~~l~~~~sspvvD~dG~--IWVGT~-~g 292 (626)
.....++.+.+ +++||.... .+.+..+|..+++.+-....+. ....+.++++|. +|+... ++
T Consensus 317 ~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~---~P~gia~spDg~~~lyv~n~~s~ 393 (426)
T 3c75_H 317 RPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGH---EIDSINVSQDAEPLLYALSAGTQ 393 (426)
T ss_dssp EECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE---EECEEEECCSSSCEEEEEETTTT
T ss_pred ccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCC---CcCeEEEccCCCEEEEEEcCCCC
Confidence 00112445555 589998531 2468899999999876654431 234467777776 666553 68
Q ss_pred eEEEEcCC-CCEEEE
Q 006913 293 LLYSFSPS-GVLNKF 306 (626)
Q Consensus 293 GLy~~d~~-g~~~~~ 306 (626)
.|..+|.. +++...
T Consensus 394 ~VsVID~~t~kvv~t 408 (426)
T 3c75_H 394 TLHIYDAATGEELRS 408 (426)
T ss_dssp EEEEEETTTCCEEEE
T ss_pred eEEEEECCCCCEEEE
Confidence 99999974 666544
No 172
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=96.63 E-value=0.88 Score=47.81 Aligned_cols=239 Identities=10% Similarity=-0.001 Sum_probs=131.9
Q ss_pred eeEEeeCCEEEEEe-CCcEEEEcC-CCCEEEEEeCCCCCCcccCeEEe--cCCe-EEEEE-CCeEEEEECCCCccccce-
Q 006913 41 KPLIGEDGKIYACS-EKTLFAFES-NGTIAWSLDLDFTCNIGTAPVHG--GTGE-VYIVA-ENRVLKVDLLKIGTSESA- 113 (626)
Q Consensus 41 spvid~dG~IwIgS-dggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD--~dG~-IwVgT-~ggL~~id~~~~~~~~~~- 113 (626)
......++.+..|+ ++.+..+|. +++....+.... ..+.++... .++. +..++ ++.|..+|..+.......
T Consensus 167 ~l~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~h~--~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~ 244 (464)
T 3v7d_B 167 ALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHN--STVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHG 244 (464)
T ss_dssp EEEECSTTEEEEEETTSCEEEEETTTTEEEEEECCCS--SCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC----
T ss_pred EEEEcCCCEEEEEeCCCCEEEEECCCCcEEEEECCCC--CccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCccccccc
Confidence 33444566666666 667888887 676654443211 122233332 3555 44445 788888887664310000
Q ss_pred -----eEEEecCCC-------CCCCCCCeeEEEEEEcCCeEEEEEcCCeEEEEeCC-CcEEEEECCcccccccccccccC
Q 006913 114 -----TQVFYGTGS-------GKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKT 180 (626)
Q Consensus 114 -----~~~~~~~~~-------~~~~~~~~I~s~~~d~dG~LwIgT~~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~ 180 (626)
......+.. .... ...+..+ ...+..+..++.++.|..+|.. ++.+..... +
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~-~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~------------~- 309 (464)
T 3v7d_B 245 EEHDYPLVFHTPEENPYFVGVLRGH-MASVRTV-SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSG------------H- 309 (464)
T ss_dssp --CCSSEEESCGGGCTTEEEEECCC-SSCEEEE-EEETTEEEEEETTSCEEEEETTTTEEEEEECC------------C-
T ss_pred ccCCcceEeeccCCCeEEEEEccCc-cceEEEE-cCCCCEEEEEeCCCeEEEEECCCCcEEEEecC------------C-
Confidence 000000000 0001 1122222 3346678888888889999974 766554311 0
Q ss_pred CCCCccccceEEEcCCCeEEEEcCCCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCCeEEEEEcCCCEEEEEECCCCc
Q 006913 181 DVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGN 260 (626)
Q Consensus 181 l~~~~i~sspviD~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~tG~ 260 (626)
... ..+....+.+..|..|+.++.|..+|.++++........ ...+.++..+ +..|..++ .++.+..+|..++.
T Consensus 310 --~~~-v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h-~~~v~~~~~~-~~~l~s~s-~dg~v~vwd~~~~~ 383 (464)
T 3v7d_B 310 --TDR-IYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGH-TALVGLLRLS-DKFLVSAA-ADGSIRGWDANDYS 383 (464)
T ss_dssp --SSC-EEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCC-SSCEEEEEEC-SSEEEEEE-TTSEEEEEETTTCC
T ss_pred --CCC-EEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCC-CCcEEEEEEc-CCEEEEEe-CCCcEEEEECCCCc
Confidence 011 233455542456788888899999999988876554321 2235555554 45677766 45788889988887
Q ss_pred EEEEEecCCCCCceeeEEEeeCCeEEEEEcCCeEEEEcCC-CCEEE
Q 006913 261 ILWHKSVGPLGSAEYAPVVDSNGWISVGSLDGLLYSFSPS-GVLNK 305 (626)
Q Consensus 261 ~~w~~~~~~l~~~~sspvvD~dG~IWVGT~~gGLy~~d~~-g~~~~ 305 (626)
......... .........++.+.+.+.++.|..+|.. ++...
T Consensus 384 ~~~~~~~~~---~~~~~~~~~~~~~l~~~~dg~i~iwd~~~g~~~~ 426 (464)
T 3v7d_B 384 RKFSYHHTN---LSAITTFYVSDNILVSGSENQFNIYNLRSGKLVH 426 (464)
T ss_dssp EEEEEECTT---CCCEEEEEECSSEEEEEETTEEEEEETTTCCEEE
T ss_pred eeeeecCCC---CccEEEEEeCCCEEEEecCCeEEEEECCCCcEEe
Confidence 766554332 1222344445655554448899999964 66554
No 173
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=96.62 E-value=0.67 Score=46.27 Aligned_cols=238 Identities=7% Similarity=-0.084 Sum_probs=116.4
Q ss_pred CEEE-EEe-CCcEEEEcC-CCCEEEEEeCCCCCCcccCeEEec-CCeEE-EEE-CCeEEEEECCCCccccceeEEEecCC
Q 006913 48 GKIY-ACS-EKTLFAFES-NGTIAWSLDLDFTCNIGTAPVHGG-TGEVY-IVA-ENRVLKVDLLKIGTSESATQVFYGTG 121 (626)
Q Consensus 48 G~Iw-IgS-dggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~-dG~Iw-VgT-~ggL~~id~~~~~~~~~~~~~~~~~~ 121 (626)
|.+. .|+ ++.+..+|. +++....+.... ..+.++.... ++.+. .++ ++.|..+|..++. ....+...
T Consensus 85 ~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~-----~~~~~~~~ 157 (366)
T 3k26_A 85 HPLLAVAGSRGIIRIINPITMQCIKHYVGHG--NAINELKFHPRDPNLLLSVSKDHALRLWNIQTDT-----LVAIFGGV 157 (366)
T ss_dssp CEEEEEEETTCEEEEECTTTCCEEEEEESCC--SCEEEEEECSSCTTEEEEEETTSCEEEEETTTTE-----EEEEECST
T ss_pred CCEEEEecCCCEEEEEEchhceEeeeecCCC--CcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCe-----EEEEeccc
Confidence 4444 455 567889997 777765554221 2344555555 56544 455 6889999987753 12222110
Q ss_pred CCCCCCCCeeEEEEEEcC-CeEEEEEcCCeEEEEeCC-CcEEEEEC------Cccccccc-------ccccccCCCCCcc
Q 006913 122 SGKGGTGAIAGIAVSTSS-SSVYINVKGRALFAFMTH-GQLLWSAG------PVLDQLGY-------RQGCTKTDVDCYF 186 (626)
Q Consensus 122 ~~~~~~~~~I~s~~~d~d-G~LwIgT~~gGL~a~d~~-G~~~w~~~------~~~~~~~~-------~~~~~~~l~~~~i 186 (626)
... ...+..+....+ ..|..++.++.|..+|.. ++...... +....... ............
T Consensus 158 --~~~-~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 233 (366)
T 3k26_A 158 --EGH-RDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNY- 233 (366)
T ss_dssp --TSC-SSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSC-
T ss_pred --ccc-cCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcce-
Confidence 011 223444444444 456677777888888865 43211000 00000000 000000000111
Q ss_pred ccceEEEcCCCeEEEEcCCCeEEEEeCCCCeE--------------EEEEcCCCCCcceeeeeecC--CeEEEEEcCCCE
Q 006913 187 TSVPVIDQCEGSIYISNTQGELYSLSAHSPYF--------------NWIQDLSSFDKAFTLTPGNN--GYLYVTIPVRAL 250 (626)
Q Consensus 187 ~sspviD~~dG~LwIGT~~GgL~~ld~~tg~~--------------~w~~~~~s~~~v~sI~~D~d--G~LwVGT~~gG~ 250 (626)
..++... ++.|..++.++.|..+|..++.. ....... ...+.++....+ |.+.+....++.
T Consensus 234 v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~~~l~~~~~dg~ 310 (366)
T 3k26_A 234 VDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYS-QCDIWYMRFSMDFWQKMLALGNQVGK 310 (366)
T ss_dssp CCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECS-SCCSSCCCCEECTTSSEEEEECTTSC
T ss_pred EEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheecccccc-CCcEEEEEEcCCCCCcEEEEEecCCc
Confidence 1233344 56788888888899998876532 1111110 112333333334 654443334578
Q ss_pred EEEEECCCCcE----EEEEecCCCCCceeeEEEeeCCe-EEEEEcCCeEEEEcC
Q 006913 251 VLALDTSSGNI----LWHKSVGPLGSAEYAPVVDSNGW-ISVGSLDGLLYSFSP 299 (626)
Q Consensus 251 l~alD~~tG~~----~w~~~~~~l~~~~sspvvD~dG~-IWVGT~~gGLy~~d~ 299 (626)
+..+|..+++. ............+..+...++|. |..|+.++.|+.+|.
T Consensus 311 i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~ 364 (366)
T 3k26_A 311 LYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDR 364 (366)
T ss_dssp EEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC
T ss_pred EEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEe
Confidence 88888877652 11221110012345566666654 556777777777763
No 174
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.58 E-value=0.68 Score=45.85 Aligned_cols=217 Identities=11% Similarity=-0.051 Sum_probs=114.3
Q ss_pred eeEEeeCCEEEE-Ee-CCcEEEEcC-CCCEEEEEeCCCCCCcccCeEEecCCeEEE-EE-CCeEEEEECCCCccccceeE
Q 006913 41 KPLIGEDGKIYA-CS-EKTLFAFES-NGTIAWSLDLDFTCNIGTAPVHGGTGEVYI-VA-ENRVLKVDLLKIGTSESATQ 115 (626)
Q Consensus 41 spvid~dG~IwI-gS-dggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~dG~IwV-gT-~ggL~~id~~~~~~~~~~~~ 115 (626)
......+|.+.+ |+ ++.+..+|. +++....+.... ..+.++....++++.+ +. ++.|..+|..++.. .
T Consensus 70 ~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~-----~ 142 (312)
T 4ery_A 70 DVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHS--NYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC-----L 142 (312)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCS--SCEEEEEECSSSSEEEEEETTSCEEEEETTTCCE-----E
T ss_pred EEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCC--CCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEE-----E
Confidence 344445665444 55 567888887 676654433221 2233444556666554 44 78899999877531 1
Q ss_pred EEecCCCCCCCCCCeeEEEEEEcCC-eEEEEEcCCeEEEEeCC-CcEEEEECCcccccccccccccCCCCCccccceEEE
Q 006913 116 VFYGTGSGKGGTGAIAGIAVSTSSS-SVYINVKGRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVID 193 (626)
Q Consensus 116 ~~~~~~~~~~~~~~~I~s~~~d~dG-~LwIgT~~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD 193 (626)
..+.. . ...+..+....++ .|..++.++-|..+|.. ++....... . . ... ...+...
T Consensus 143 ~~~~~-----~-~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~-------~----~---~~~-~~~~~~~ 201 (312)
T 4ery_A 143 KTLPA-----H-SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID-------D----D---NPP-VSFVKFS 201 (312)
T ss_dssp EEECC-----C-SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECC-------S----S---CCC-EEEEEEC
T ss_pred EEecC-----C-CCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEec-------c----C---CCc-eEEEEEC
Confidence 22211 1 1234444444454 46667777888899974 665443200 0 0 001 1223444
Q ss_pred cCCCeEEEEcCCCeEEEEeCCCCeEEEEEcCCC--CCcceeeeeecCCeEEEEEcCCCEEEEEECCCCcEEEEEecCCCC
Q 006913 194 QCEGSIYISNTQGELYSLSAHSPYFNWIQDLSS--FDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLG 271 (626)
Q Consensus 194 ~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s--~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~ 271 (626)
+.+..|..++.++.|..+|..+++......... ...+.......++.+.+....++.+..+|..+++........ .
T Consensus 202 ~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h--~ 279 (312)
T 4ery_A 202 PNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH--T 279 (312)
T ss_dssp TTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCC--S
T ss_pred CCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhcc--C
Confidence 424557778888999999999887665433211 111111122234544443334567888898888776544322 1
Q ss_pred CceeeEEEeeCCeEEE
Q 006913 272 SAEYAPVVDSNGWISV 287 (626)
Q Consensus 272 ~~~sspvvD~dG~IWV 287 (626)
..+.++...+++.+.+
T Consensus 280 ~~v~~~~~~p~~~~l~ 295 (312)
T 4ery_A 280 DVVISTACHPTENIIA 295 (312)
T ss_dssp SCEEEEEECSSSSEEE
T ss_pred CcEEEEeecCcCCceE
Confidence 2234455555554443
No 175
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.56 E-value=0.028 Score=64.59 Aligned_cols=197 Identities=10% Similarity=0.073 Sum_probs=108.3
Q ss_pred eeeeEEee-CCEEEEEe--CCcEEEEcCCC----CEEEEEeCCCCCCcccCeEEe-cCCeEEEEE--CCeEEEEECCCCc
Q 006913 39 LSKPLIGE-DGKIYACS--EKTLFAFESNG----TIAWSLDLDFTCNIGTAPVHG-GTGEVYIVA--ENRVLKVDLLKIG 108 (626)
Q Consensus 39 ~Sspvid~-dG~IwIgS--dggL~a~d~~G----~~~W~~~~~~~~~i~~sp~iD-~dG~IwVgT--~ggL~~id~~~~~ 108 (626)
...+.++. ++.||+.. .+.|++++.++ ... .............+++| ..++||++. .+.|.++++++..
T Consensus 408 p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~-~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~ 486 (699)
T 1n7d_A 408 VVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSY-DTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK 486 (699)
T ss_dssp CCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCC-CCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCC
T ss_pred eEEEccccccCeEEEEecCCCeEEEEecCCCCCCcce-EEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCc
Confidence 33455653 67888875 45788888754 111 01011000112356666 467899875 5789999887642
Q ss_pred cccceeEEEecCCCCCCCCCCeeEEEEEE-cCCeEEEEEcC--CeEEEEeCCCcEEEEECCcccccccccccccCCCCCc
Q 006913 109 TSESATQVFYGTGSGKGGTGAIAGIAVST-SSSSVYINVKG--RALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCY 185 (626)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~I~s~~~d-~dG~LwIgT~~--gGL~a~d~~G~~~w~~~~~~~~~~~~~~~~~~l~~~~ 185 (626)
......... ....+ +..+ .+|.||+.... +.|++++++|...-.... ..+ .
T Consensus 487 -----~~~l~~~~~-----~~P~g-iavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~------------~~l---~ 540 (699)
T 1n7d_A 487 -----RKTLFREQG-----SKPRA-IVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT------------ENI---Q 540 (699)
T ss_dssp -----EEEECCCSS-----CCCCC-EECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESC------------SSC---S
T ss_pred -----eEEEEeCCC-----CCcce-EEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEe------------CCC---C
Confidence 122211100 01112 2334 46788887543 568888877643221100 000 0
Q ss_pred cccceEEEcCCCeEEEEcC-CCeEEEEeCCCCeEEEEEcCC-CCCcceeeeeecCCeEEEEEcCCCEEEEEECCCCcEEE
Q 006913 186 FTSVPVIDQCEGSIYISNT-QGELYSLSAHSPYFNWIQDLS-SFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILW 263 (626)
Q Consensus 186 i~sspviD~~dG~LwIGT~-~GgL~~ld~~tg~~~w~~~~~-s~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~tG~~~w 263 (626)
....+++|..+++||++.. .+.|.+++.++.......... .......++++.+ +||+.....+.|..+++.+|+...
T Consensus 541 ~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~~ 619 (699)
T 1n7d_A 541 WPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVN 619 (699)
T ss_dssp SCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEEEE
T ss_pred CccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCceE
Confidence 1234677743688998865 457999998875443332211 1223445667754 777776666789999987887654
No 176
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=96.53 E-value=0.95 Score=46.97 Aligned_cols=236 Identities=12% Similarity=0.015 Sum_probs=125.8
Q ss_pred eeeEEeeCCEEEEE-eCCcEEEEcC-CCCEEEEEeCCCC----------------CCcccCeEEecCCeEEE-EE-CCeE
Q 006913 40 SKPLIGEDGKIYAC-SEKTLFAFES-NGTIAWSLDLDFT----------------CNIGTAPVHGGTGEVYI-VA-ENRV 99 (626)
Q Consensus 40 Sspvid~dG~IwIg-SdggL~a~d~-~G~~~W~~~~~~~----------------~~i~~sp~iD~dG~IwV-gT-~ggL 99 (626)
.......+|.+++. +++.+..++. +|.....+..... ...+.++....+|+..+ |. ++.|
T Consensus 68 ~~v~fspdg~~la~g~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~~d~~i 147 (393)
T 1erj_A 68 CCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLI 147 (393)
T ss_dssp CEEEECTTSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEETTSCE
T ss_pred EEEEECCCCCEEEEEcCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEEcCCCeE
Confidence 34444467766554 4667778886 7776543322100 00133455666777554 44 6788
Q ss_pred EEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEE-cCCeEEEEEcCCeEEEEeCC-CcEEEEECCccccccccccc
Q 006913 100 LKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVST-SSSSVYINVKGRALFAFMTH-GQLLWSAGPVLDQLGYRQGC 177 (626)
Q Consensus 100 ~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d-~dG~LwIgT~~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~ 177 (626)
..+|..++.. ...+. .... .|..+... .+..|..++.++-+..+|.. ++....... .
T Consensus 148 ~iwd~~~~~~-----~~~~~-----~h~~-~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~-------~--- 206 (393)
T 1erj_A 148 RIWDIENRKI-----VMILQ-----GHEQ-DIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSI-------E--- 206 (393)
T ss_dssp EEEETTTTEE-----EEEEC-----CCSS-CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC-------S---
T ss_pred EEEECCCCcE-----EEEEc-----cCCC-CEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEc-------C---
Confidence 8889877531 11121 1112 33433333 34457777778888888974 665443200 0
Q ss_pred ccCCCCCccccceEEEc-CCCeEEEEcCCCeEEEEeCCCCeEEEEEcC------CCCCcceeeeeecCCeEEEEEcCCCE
Q 006913 178 TKTDVDCYFTSVPVIDQ-CEGSIYISNTQGELYSLSAHSPYFNWIQDL------SSFDKAFTLTPGNNGYLYVTIPVRAL 250 (626)
Q Consensus 178 ~~~l~~~~i~sspviD~-~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~------~s~~~v~sI~~D~dG~LwVGT~~gG~ 250 (626)
..+ ......+ .+..|..|+.++.|..+|.+++........ +....+.++....+|.+.+....++.
T Consensus 207 ------~~v-~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~ 279 (393)
T 1erj_A 207 ------DGV-TTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRS 279 (393)
T ss_dssp ------SCE-EEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred ------CCc-EEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCE
Confidence 011 2233322 134567788888999999998876543321 11234666777777754443334567
Q ss_pred EEEEECCCCcEEE------------EEecCCCCCceeeEEEeeCC-eEEEEEcCCeEEEEcCC-CCEEE
Q 006913 251 VLALDTSSGNILW------------HKSVGPLGSAEYAPVVDSNG-WISVGSLDGLLYSFSPS-GVLNK 305 (626)
Q Consensus 251 l~alD~~tG~~~w------------~~~~~~l~~~~sspvvD~dG-~IWVGT~~gGLy~~d~~-g~~~~ 305 (626)
+...|..++.... ..... ...+.++...+++ .|..|+.++.|+.+|.. ++...
T Consensus 280 v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h--~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~ 346 (393)
T 1erj_A 280 VKLWNLQNANNKSDSKTPNSGTCEVTYIGH--KDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLL 346 (393)
T ss_dssp EEEEEC---------------CEEEEEECC--SSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEE
T ss_pred EEEEECCCCCCcccccCCCCCcceEEEecc--cCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEE
Confidence 7777765543211 11100 1123445555454 57778888999999975 55443
No 177
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=96.53 E-value=1.5 Score=49.23 Aligned_cols=195 Identities=12% Similarity=0.050 Sum_probs=115.5
Q ss_pred ccCeEEecCCeEEEE-E-CCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEcC-CeEEEEEcCCeEEEEeC
Q 006913 80 GTAPVHGGTGEVYIV-A-ENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSS-SSVYINVKGRALFAFMT 156 (626)
Q Consensus 80 ~~sp~iD~dG~IwVg-T-~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~d-G~LwIgT~~gGL~a~d~ 156 (626)
+.++....+|++.+. + ++.|...|..++.. ...+. .+.. .|..+....+ ..|..++.++.|..+|.
T Consensus 433 v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~-----~~~~~-----~h~~-~v~~~~~s~~~~~l~s~s~D~~i~iwd~ 501 (694)
T 3dm0_A 433 VEDVVLSSDGQFALSGSWDGELRLWDLAAGVS-----TRRFV-----GHTK-DVLSVAFSLDNRQIVSASRDRTIKLWNT 501 (694)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTTEE-----EEEEE-----CCSS-CEEEEEECTTSSCEEEEETTSCEEEECT
T ss_pred EEEEEECCCCCEEEEEeCCCcEEEEECCCCcc-----eeEEe-----CCCC-CEEEEEEeCCCCEEEEEeCCCEEEEEEC
Confidence 445566677776554 4 78888889877531 11111 1112 3344433344 45777788888888887
Q ss_pred CCcEEEEECCcccccccccccccCCCCCccccceEEEcC--CCeEEEEcCCCeEEEEeCCCCeEEEEEcCCCCCcceeee
Q 006913 157 HGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQC--EGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLT 234 (626)
Q Consensus 157 ~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~--dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~ 234 (626)
.+........ ....+ ... ..+....+. ...|..|+.++.|..+|.++++...... +....+.++.
T Consensus 502 ~~~~~~~~~~--------~~~~h---~~~-v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~-~h~~~v~~v~ 568 (694)
T 3dm0_A 502 LGECKYTISE--------GGEGH---RDW-VSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLA-GHTGYVSTVA 568 (694)
T ss_dssp TSCEEEEECS--------STTSC---SSC-EEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEEC-CCSSCEEEEE
T ss_pred CCCcceeecc--------CCCCC---CCc-EEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEc-CCCCCEEEEE
Confidence 6554443211 00000 011 122333320 1357778888999999998877654322 1123466777
Q ss_pred eecCCeEEEEEcCCCEEEEEECCCCcEEEEEecCCCCCceeeEEEeeCCeEEEEEcCCeEEEEcCCC
Q 006913 235 PGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPVVDSNGWISVGSLDGLLYSFSPSG 301 (626)
Q Consensus 235 ~D~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~~~sspvvD~dG~IWVGT~~gGLy~~d~~g 301 (626)
...+|++.+....++.+...|..+++.+...... ..+.++...+++.+.+++.+++|..+|...
T Consensus 569 ~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~---~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~ 632 (694)
T 3dm0_A 569 VSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEAN---SVIHALCFSPNRYWLCAATEHGIKIWDLES 632 (694)
T ss_dssp ECTTSSEEEEEETTSBCEEEETTTTEEEECCBCS---SCEEEEEECSSSSEEEEEETTEEEEEETTT
T ss_pred EeCCCCEEEEEeCCCeEEEEECCCCceEEEecCC---CcEEEEEEcCCCcEEEEEcCCCEEEEECCC
Confidence 7778865554435578888898888876543322 235557777788888877788999999753
No 178
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=96.53 E-value=0.24 Score=50.97 Aligned_cols=244 Identities=8% Similarity=-0.024 Sum_probs=122.2
Q ss_pred eeeeEEeeCCEE-EEEe-CCcEEEEcC-C---C-CEEEEEeCCCCCCcccCeEEecC-CeEE-EEE-CCeEEEEECCCCc
Q 006913 39 LSKPLIGEDGKI-YACS-EKTLFAFES-N---G-TIAWSLDLDFTCNIGTAPVHGGT-GEVY-IVA-ENRVLKVDLLKIG 108 (626)
Q Consensus 39 ~Sspvid~dG~I-wIgS-dggL~a~d~-~---G-~~~W~~~~~~~~~i~~sp~iD~d-G~Iw-VgT-~ggL~~id~~~~~ 108 (626)
...+....+|.+ ..|+ ++.+..++. + + .....+. .. ...+.++....+ ++++ .++ ++.|..+|..+..
T Consensus 70 v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~-~h-~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~ 147 (416)
T 2pm9_A 70 FNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFS-NH-SSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCT 147 (416)
T ss_dssp EEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECC-CS-SSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTS
T ss_pred eEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhcc-CC-ccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCc
Confidence 344444456654 4455 567888887 3 2 2332222 11 123444555554 5544 444 6788888887652
Q ss_pred cccceeEEEecCCCCCCCCCCeeEEEEEEcC--CeEEEEEcCCeEEEEeCC-CcEEEEECCcccccccccccccCCCCCc
Q 006913 109 TSESATQVFYGTGSGKGGTGAIAGIAVSTSS--SSVYINVKGRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCY 185 (626)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~d--G~LwIgT~~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~ 185 (626)
........ ........... .+..+....+ ..|..++.++.|..+|.. ++....... .. ........
T Consensus 148 ~~~~~~~~-~~~~~~~~~~~-~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~-------~~--~~~~~~~~ 216 (416)
T 2pm9_A 148 ESPSNYTP-LTPGQSMSSVD-EVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSY-------TS--PNSGIKQQ 216 (416)
T ss_dssp SCTTTCCC-BCCCCSCCSSC-CCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECC-------CC--CSSCCCCC
T ss_pred cccccccc-cccccccCCCC-CeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEec-------cc--cccccCCc
Confidence 00000000 00000011112 2333333333 345566677779999975 665544311 00 00000011
Q ss_pred cccceEEEcCCC--eEEEEcCCC---eEEEEeCCCCe-EEEEEcCCCCCcceeeeeec-CCe-EEEEEcCCCEEEEEECC
Q 006913 186 FTSVPVIDQCEG--SIYISNTQG---ELYSLSAHSPY-FNWIQDLSSFDKAFTLTPGN-NGY-LYVTIPVRALVLALDTS 257 (626)
Q Consensus 186 i~sspviD~~dG--~LwIGT~~G---gL~~ld~~tg~-~~w~~~~~s~~~v~sI~~D~-dG~-LwVGT~~gG~l~alD~~ 257 (626)
..++...+ ++ .|..++.++ .|..+|.+++. ............+.++.... ++. |..++ .++.+..+|..
T Consensus 217 -v~~~~~~~-~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~-~dg~v~~wd~~ 293 (416)
T 2pm9_A 217 -LSVVEWHP-KNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSG-RDNTVLLWNPE 293 (416)
T ss_dssp -EEEEEECS-SCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEE-SSSEEEEECSS
T ss_pred -eEEEEECC-CCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEe-CCCCEEEeeCC
Confidence 23344543 33 466777676 78999988752 21111101122355566554 554 55555 45788889988
Q ss_pred CCcEEEEEecCCCCCceeeEEEeeCC--eEEEEEcCCeEEEEcCC
Q 006913 258 SGNILWHKSVGPLGSAEYAPVVDSNG--WISVGSLDGLLYSFSPS 300 (626)
Q Consensus 258 tG~~~w~~~~~~l~~~~sspvvD~dG--~IWVGT~~gGLy~~d~~ 300 (626)
+++......... ..+..+...+++ .+..++.++.|..++..
T Consensus 294 ~~~~~~~~~~~~--~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~ 336 (416)
T 2pm9_A 294 SAEQLSQFPARG--NWCFKTKFAPEAPDLFACASFDNKIEVQTLQ 336 (416)
T ss_dssp SCCEEEEEECSS--SCCCCEEECTTCTTEEEECCSSSEEEEEESC
T ss_pred CCccceeecCCC--CceEEEEECCCCCCEEEEEecCCcEEEEEcc
Confidence 888776543321 223446666665 56667777888888753
No 179
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=96.51 E-value=1.1 Score=47.36 Aligned_cols=196 Identities=8% Similarity=-0.088 Sum_probs=103.5
Q ss_pred ccCeEEecCCeEE-EEE--CCeEEEEECC--CCccccceeEEEecCCCCCCCCCCeeEEEEEEcC-CeEEEEEcCCeEEE
Q 006913 80 GTAPVHGGTGEVY-IVA--ENRVLKVDLL--KIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSS-SSVYINVKGRALFA 153 (626)
Q Consensus 80 ~~sp~iD~dG~Iw-VgT--~ggL~~id~~--~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~d-G~LwIgT~~gGL~a 153 (626)
+.++....+|... +.+ ++.|..++.. ++.. ....... .. ...+..+....+ ..|+.++.++.++.
T Consensus 105 v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~----~~~~~~~----~~-~~~v~~~~~sp~~~~l~~~~~~g~v~~ 175 (450)
T 2vdu_B 105 IRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNV----LKLRKRF----CF-SKRPNAISIAEDDTTVIIADKFGDVYS 175 (450)
T ss_dssp EEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSC----EEEEEEE----EC-SSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred eEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCce----eeeeecc----cC-CCCceEEEEcCCCCEEEEEeCCCcEEE
Confidence 3445566777764 333 6778888876 4421 1111000 00 122333333444 45777777777888
Q ss_pred EeCC-CcEEEEECCcccccccccccccCCCCCccccceEEEcCC---C-eEEEEcCCCeEEEEeCCCCeEEEEEcCCCCC
Q 006913 154 FMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCE---G-SIYISNTQGELYSLSAHSPYFNWIQDLSSFD 228 (626)
Q Consensus 154 ~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~d---G-~LwIGT~~GgL~~ld~~tg~~~w~~~~~s~~ 228 (626)
++.. ++..... ...+ . .+ ... ..++...+ + + .|..|+.++.|..+|.++++.......+...
T Consensus 176 ~~~~~~~~~~~~---~~~~--~---~h---~~~-v~~~~~sp-~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~ 242 (450)
T 2vdu_B 176 IDINSIPEEKFT---QEPI--L---GH---VSM-LTDVHLIK-DSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKH 242 (450)
T ss_dssp EETTSCCCSSCC---CCCS--E---EC---SSC-EEEEEEEE-CTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSS
T ss_pred EecCCccccccc---ceee--e---cc---cCc-eEEEEEcC-CCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCC
Confidence 8853 4321000 0000 0 00 011 23344554 4 5 4666777888999998887655432212223
Q ss_pred cceeeeeecCC-eEEEEEcCCCEEEEEECCCCcEEEEEecC-----------------------CCCCceeeEEEeeCC-
Q 006913 229 KAFTLTPGNNG-YLYVTIPVRALVLALDTSSGNILWHKSVG-----------------------PLGSAEYAPVVDSNG- 283 (626)
Q Consensus 229 ~v~sI~~D~dG-~LwVGT~~gG~l~alD~~tG~~~w~~~~~-----------------------~l~~~~sspvvD~dG- 283 (626)
.+.++... +| .|+.++ ..+.+..+|..+|+........ .....+..+...+++
T Consensus 243 ~v~~~~~s-d~~~l~s~~-~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~ 320 (450)
T 2vdu_B 243 FVSSICCG-KDYLLLSAG-GDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLP 320 (450)
T ss_dssp CEEEEEEC-STTEEEEEE-SSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSS
T ss_pred ceEEEEEC-CCCEEEEEe-CCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCC
Confidence 45666666 66 455555 4578989999999876554321 000123345555555
Q ss_pred eEEEEE-cCCeEEEEcC
Q 006913 284 WISVGS-LDGLLYSFSP 299 (626)
Q Consensus 284 ~IWVGT-~~gGLy~~d~ 299 (626)
.|++++ .++.|..++.
T Consensus 321 ~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 321 FVAFFVEATKCIIILEM 337 (450)
T ss_dssp EEEEEETTCSEEEEEEE
T ss_pred EEEEEECCCCeEEEEEe
Confidence 566777 6777877775
No 180
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=96.49 E-value=0.79 Score=45.52 Aligned_cols=191 Identities=7% Similarity=-0.062 Sum_probs=102.0
Q ss_pred ccCeEEecCCe-EEEEE-CCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEE-cCC-eEEEEEcCCeEEEEe
Q 006913 80 GTAPVHGGTGE-VYIVA-ENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVST-SSS-SVYINVKGRALFAFM 155 (626)
Q Consensus 80 ~~sp~iD~dG~-IwVgT-~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d-~dG-~LwIgT~~gGL~a~d 155 (626)
+.++....++. |+.++ ++.|..++..++..... ...... ... .+..+... .+. .|+.++.++.|..++
T Consensus 14 v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~-~~~~~~------~~~-~v~~~~~~~~~~~~l~~~~~dg~i~~wd 85 (342)
T 1yfq_A 14 ISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVD-LLQSLR------YKH-PLLCCNFIDNTDLQIYVGTVQGEILKVD 85 (342)
T ss_dssp EEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEE-EEEEEE------CSS-CEEEEEEEESSSEEEEEEETTSCEEEEC
T ss_pred EEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCcccc-ceeeee------cCC-ceEEEEECCCCCcEEEEEcCCCeEEEEE
Confidence 33444555555 44455 67787777665421000 111111 112 33443333 444 588888888899999
Q ss_pred C-C-CcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcCCCeEEEEeCCC---------CeEEEEEcC
Q 006913 156 T-H-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHS---------PYFNWIQDL 224 (626)
Q Consensus 156 ~-~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~~GgL~~ld~~t---------g~~~w~~~~ 224 (626)
. . ++. .... + ..+ ...+ ..+...+ ++.|+.++.++.|..+|.++ ++......
T Consensus 86 ~~~~~~~-~~~~------~----~~~---~~~v-~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~- 148 (342)
T 1yfq_A 86 LIGSPSF-QALT------N----NEA---NLGI-CRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK- 148 (342)
T ss_dssp SSSSSSE-EECB------S----CCC---CSCE-EEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-
T ss_pred eccCCce-Eecc------c----cCC---CCce-EEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-
Confidence 8 6 443 2210 0 000 0112 3445554 67788888888898888765 32211111
Q ss_pred CCCCcceeeeeecCCeEEEEEcCCCEEEEEECCC-CcEEEE-EecCCCCCceeeEEEee-C-CeEEEEEcCCeEEEEcC
Q 006913 225 SSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSS-GNILWH-KSVGPLGSAEYAPVVDS-N-GWISVGSLDGLLYSFSP 299 (626)
Q Consensus 225 ~s~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~t-G~~~w~-~~~~~l~~~~sspvvD~-d-G~IWVGT~~gGLy~~d~ 299 (626)
....+.++....++ +++++. ++.+..+|..+ +..... .... ....+.++...+ + ..+.+|+.++.+..++.
T Consensus 149 -~~~~v~~~~~~~~~-l~~~~~-d~~i~i~d~~~~~~~~~~~~~~~-~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~ 223 (342)
T 1yfq_A 149 -VKNKIFTMDTNSSR-LIVGMN-NSQVQWFRLPLCEDDNGTIEESG-LKYQIRDVALLPKEQEGYACSSIDGRVAVEFF 223 (342)
T ss_dssp -SCCCEEEEEECSSE-EEEEES-TTEEEEEESSCCTTCCCEEEECS-CSSCEEEEEECSGGGCEEEEEETTSEEEEEEC
T ss_pred -eCCceEEEEecCCc-EEEEeC-CCeEEEEECCccccccceeeecC-CCCceeEEEECCCCCCEEEEEecCCcEEEEEE
Confidence 12235566666555 888874 57888889877 543211 1111 112345566665 4 46777888887777654
No 181
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.47 E-value=0.023 Score=65.29 Aligned_cols=230 Identities=11% Similarity=0.026 Sum_probs=119.1
Q ss_pred CEEEEEeCCcEEEEcCCC-CEEEEEeCCCCCCcccCeEEec-CCeEEEEE--CCeEEEEECCCCccccceeEEEecCCCC
Q 006913 48 GKIYACSEKTLFAFESNG-TIAWSLDLDFTCNIGTAPVHGG-TGEVYIVA--ENRVLKVDLLKIGTSESATQVFYGTGSG 123 (626)
Q Consensus 48 G~IwIgSdggL~a~d~~G-~~~W~~~~~~~~~i~~sp~iD~-dG~IwVgT--~ggL~~id~~~~~~~~~~~~~~~~~~~~ 123 (626)
..|++.....|..++..+ .... .... ......+.+|. .+.||++. .+.|+++++.+...... .......
T Consensus 378 ~~ll~~~~~~I~~id~~~~~~~~--~~~~-~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~-~~~~i~~--- 450 (699)
T 1n7d_A 378 AYLFFTNRHEVRKMTLDRSEYTS--LIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSS-YDTVISR--- 450 (699)
T ss_dssp CCBCCCCTTC-CEECTTSCCEEC--CSCC-CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CC-CCCBCCS---
T ss_pred eeEEecCccceEEEeCCCCccee--eecc-CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcc-eEEEEeC---
Confidence 445555556777887743 3321 1111 11233566664 67888875 57899998875100000 0000000
Q ss_pred CCCCCCeeEEEEEE-cCCeEEEEEc-CCeEEEEeCCCcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEE
Q 006913 124 KGGTGAIAGIAVST-SSSSVYINVK-GRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYI 201 (626)
Q Consensus 124 ~~~~~~~I~s~~~d-~dG~LwIgT~-~gGL~a~d~~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwI 201 (626)
......+ +..+ .+++||+... .+.|..++++|..+-.... . .+ .....+++|..++.||+
T Consensus 451 --~~~~P~g-lavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~--------~----~~---~~P~giavDp~~g~ly~ 512 (699)
T 1n7d_A 451 --DIQAPDG-LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR--------E----QG---SKPRAIVVDPVHGFMYW 512 (699)
T ss_dssp --CC--CCC-EECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECC--------C----SS---CCCCCEECCSSSSCCEE
T ss_pred --CCCCcce-EEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEe--------C----CC---CCcceEEEccCCCcEEE
Confidence 0011112 2334 5788988743 4678899988654332200 0 00 00133566644688888
Q ss_pred EcCC--CeEEEEeCCCCeEEEEEcCCCCCcceeeeeec-CCeEEEEEcCCCEEEEEECCCCcEEEEEecC-CCCCceeeE
Q 006913 202 SNTQ--GELYSLSAHSPYFNWIQDLSSFDKAFTLTPGN-NGYLYVTIPVRALVLALDTSSGNILWHKSVG-PLGSAEYAP 277 (626)
Q Consensus 202 GT~~--GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~-dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~-~l~~~~ssp 277 (626)
.... +.|++++.++........ ........|++|. +++||++......|..++............. .+ .....+
T Consensus 513 td~~~~~~I~~~~~dG~~~~~l~~-~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~-~~P~gl 590 (699)
T 1n7d_A 513 TDWGTPAKIKKGGLNGVDIYSLVT-ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRL-AHPFSL 590 (699)
T ss_dssp CCCSSSCCEEBCCSSSCCCCEESC-SSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSC-SSCCCC
T ss_pred cccCCCCeEEEEeCCCCCeeEEEe-CCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcC-CCceEe
Confidence 7652 578888877643322211 1122344677874 5799999876678888886433222111111 11 112345
Q ss_pred EEeeCCeEEEEE-cCCeEEEEcC-CCCEEE
Q 006913 278 VVDSNGWISVGS-LDGLLYSFSP-SGVLNK 305 (626)
Q Consensus 278 vvD~dG~IWVGT-~~gGLy~~d~-~g~~~~ 305 (626)
.++.+ .||+.. ..+.|.++++ +|+...
T Consensus 591 avd~~-~lywtd~~~~~V~~~d~~~G~~~~ 619 (699)
T 1n7d_A 591 AVFED-KVFWTDIINEAIFSANRLTGSDVN 619 (699)
T ss_dssp EEETT-EEEEECSTTTCEEEEETTTEEEEE
T ss_pred EEECC-EEEEEeCCCCeEEEEEccCCCceE
Confidence 66744 566554 4568999987 465443
No 182
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.44 E-value=0.89 Score=45.59 Aligned_cols=235 Identities=9% Similarity=0.011 Sum_probs=117.0
Q ss_pred eeeeEEeeCCEEEE-Ee-CCcEEEEcC-CCC--EEEEEeCCCCCCcccCeEEecC--CeE-EEEE-CCeEEEEECCCCcc
Q 006913 39 LSKPLIGEDGKIYA-CS-EKTLFAFES-NGT--IAWSLDLDFTCNIGTAPVHGGT--GEV-YIVA-ENRVLKVDLLKIGT 109 (626)
Q Consensus 39 ~Sspvid~dG~IwI-gS-dggL~a~d~-~G~--~~W~~~~~~~~~i~~sp~iD~d--G~I-wVgT-~ggL~~id~~~~~~ 109 (626)
........+|.+.+ |+ ++.+..++. .+. ....+. .. ...+.++....+ +++ ..++ ++.|..+|..++..
T Consensus 14 v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~-~h-~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~ 91 (379)
T 3jrp_A 14 IHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLT-GH-EGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRW 91 (379)
T ss_dssp EEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEEC-CC-SSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEE
T ss_pred EEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEec-CC-CCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCce
Confidence 34444545665444 54 566777775 332 222221 11 122334444333 554 4455 67788888776521
Q ss_pred ccceeEEEecCCCCCCCCCCeeEEEEEE-c--CCeEEEEEcCCeEEEEeCC-Cc--EEEEECCcccccccccccccCCCC
Q 006913 110 SESATQVFYGTGSGKGGTGAIAGIAVST-S--SSSVYINVKGRALFAFMTH-GQ--LLWSAGPVLDQLGYRQGCTKTDVD 183 (626)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~I~s~~~d-~--dG~LwIgT~~gGL~a~d~~-G~--~~w~~~~~~~~~~~~~~~~~~l~~ 183 (626)
. ....+. .. ...+..+... . +..|..++.++.|..+|.. +. ....... +.
T Consensus 92 --~-~~~~~~-----~~-~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~------------~~--- 147 (379)
T 3jrp_A 92 --S-QIAVHA-----VH-SASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDA------------HA--- 147 (379)
T ss_dssp --E-EEEEEC-----CC-SSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEEC------------CT---
T ss_pred --e-Eeeeec-----CC-CcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecC------------CC---
Confidence 0 011111 11 1233333333 3 4567778888888888864 32 1111100 00
Q ss_pred CccccceEEEc-------------CCCeEEEEcCCCeEEEEeCCCCeEEEE--EcCCC-CCcceeeeeecC---CeEEEE
Q 006913 184 CYFTSVPVIDQ-------------CEGSIYISNTQGELYSLSAHSPYFNWI--QDLSS-FDKAFTLTPGNN---GYLYVT 244 (626)
Q Consensus 184 ~~i~sspviD~-------------~dG~LwIGT~~GgL~~ld~~tg~~~w~--~~~~s-~~~v~sI~~D~d---G~LwVG 244 (626)
..+ .++...+ .+..|..|+.++.|..+|.+++...+. ..... ...+.++....+ +.+.+.
T Consensus 148 ~~v-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s 226 (379)
T 3jrp_A 148 IGV-NSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLAS 226 (379)
T ss_dssp TCE-EEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEE
T ss_pred Cce-EEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEE
Confidence 001 1222221 145677888888899998876653332 11111 234566666666 554444
Q ss_pred EcCCCEEEEEECCCCcEEEE---EecCCCCCceeeEEEeeCCe-EEEEEcCCeEEEEcCC
Q 006913 245 IPVRALVLALDTSSGNILWH---KSVGPLGSAEYAPVVDSNGW-ISVGSLDGLLYSFSPS 300 (626)
Q Consensus 245 T~~gG~l~alD~~tG~~~w~---~~~~~l~~~~sspvvD~dG~-IWVGT~~gGLy~~d~~ 300 (626)
...++.+..+|..++...+. .........+.++...++|. |.+++.++.|+.++..
T Consensus 227 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~ 286 (379)
T 3jrp_A 227 VSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 286 (379)
T ss_dssp EETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEE
T ss_pred EeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCC
Confidence 43456777777666642211 11111122345566766664 6677888888888753
No 183
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=96.44 E-value=0.27 Score=49.08 Aligned_cols=186 Identities=8% Similarity=-0.050 Sum_probs=91.4
Q ss_pred CEEEEEe-CCcEEEEcC-CCC-EEEEEeCCCCCCcccCeE------EecCCe-EEEEE-CCeEEEEECCCCccccceeEE
Q 006913 48 GKIYACS-EKTLFAFES-NGT-IAWSLDLDFTCNIGTAPV------HGGTGE-VYIVA-ENRVLKVDLLKIGTSESATQV 116 (626)
Q Consensus 48 G~IwIgS-dggL~a~d~-~G~-~~W~~~~~~~~~i~~sp~------iD~dG~-IwVgT-~ggL~~id~~~~~~~~~~~~~ 116 (626)
..|+.|+ ++.+..+|. ++. ....+.... ..+.++. ...+++ +..++ ++.|..+|..++.. ...
T Consensus 81 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~----~~~ 154 (357)
T 3i2n_A 81 RYLATGDFGGNLHIWNLEAPEMPVYSVKGHK--EIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDD----PVA 154 (357)
T ss_dssp CCEEEEETTSCEEEECTTSCSSCSEEECCCS--SCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSS----CSE
T ss_pred ceEEEecCCCeEEEEeCCCCCccEEEEEecc--cceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCC----cce
Confidence 3455555 567888886 454 333332111 1122221 124555 44445 67888888876521 011
Q ss_pred EecCCCCCCCCCCeeEEEE----E-EcCCeEEEEEcCCeEEEEeCC-CcEEEEECCcccccccccccccCCCCCccccce
Q 006913 117 FYGTGSGKGGTGAIAGIAV----S-TSSSSVYINVKGRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVP 190 (626)
Q Consensus 117 ~~~~~~~~~~~~~~I~s~~----~-d~dG~LwIgT~~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~ssp 190 (626)
.+... .......+..+. . ..+..|..++.++.|..+|.. ++..+.... . .. ..++
T Consensus 155 ~~~~~--~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-------~---------~~-v~~~ 215 (357)
T 3i2n_A 155 NMEPV--QGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNI-------K---------NG-VCSL 215 (357)
T ss_dssp EECCC--TTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEEC-------S---------SC-EEEE
T ss_pred ecccc--CCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCC-------C---------Cc-eEEE
Confidence 11111 011111233322 1 334456677777889999975 665443200 0 11 1233
Q ss_pred EEEc---CCCeEEEEcCCCeEEEEeCCCCeEEEEEc----CCCCCcceeeeeecCCe--EEEEEcCCCEEEEEECCCC
Q 006913 191 VIDQ---CEGSIYISNTQGELYSLSAHSPYFNWIQD----LSSFDKAFTLTPGNNGY--LYVTIPVRALVLALDTSSG 259 (626)
Q Consensus 191 viD~---~dG~LwIGT~~GgL~~ld~~tg~~~w~~~----~~s~~~v~sI~~D~dG~--LwVGT~~gG~l~alD~~tG 259 (626)
...+ .++.|++|+.+|.|..+|.++++...... ......+.++....+|. +..+. .++.+..+|..++
T Consensus 216 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~ 292 (357)
T 3i2n_A 216 EFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAG-GAGGLHLWKYEYP 292 (357)
T ss_dssp EESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEE-TTSEEEEEEEECC
T ss_pred EcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEe-CCCcEEEeecCCC
Confidence 4432 26778888888989988876643221111 01123456666666775 44444 4567666665443
No 184
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=96.43 E-value=0.96 Score=45.87 Aligned_cols=114 Identities=16% Similarity=0.213 Sum_probs=65.0
Q ss_pred ceEEEcCCC-eEEEEc-CCCeEEEEeCCCCeEEEEEcCC----CCCcceeeeeecCCe-EEEEEcC-CCEEEE--EECCC
Q 006913 189 VPVIDQCEG-SIYISN-TQGELYSLSAHSPYFNWIQDLS----SFDKAFTLTPGNNGY-LYVTIPV-RALVLA--LDTSS 258 (626)
Q Consensus 189 spviD~~dG-~LwIGT-~~GgL~~ld~~tg~~~w~~~~~----s~~~v~sI~~D~dG~-LwVGT~~-gG~l~a--lD~~t 258 (626)
.+.+++ +| .||++. .++.|..++.+++.+....... .......++.+.||+ ||++... .+.+.. ++..+
T Consensus 215 ~~~~sp-dg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~ 293 (361)
T 3scy_A 215 HLIFNS-DGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETN 293 (361)
T ss_dssp EEEECT-TSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTT
T ss_pred EEEEcC-CCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCC
Confidence 355665 55 588877 4677888888877665443221 112244677777885 7777644 345544 44456
Q ss_pred CcEEEEEecCCCCCceeeEEEeeCCe-EEEEEc-CCeEEE--EcCC-CCEE
Q 006913 259 GNILWHKSVGPLGSAEYAPVVDSNGW-ISVGSL-DGLLYS--FSPS-GVLN 304 (626)
Q Consensus 259 G~~~w~~~~~~l~~~~sspvvD~dG~-IWVGT~-~gGLy~--~d~~-g~~~ 304 (626)
|+......... +.....+.++++|. ||++.. ++.+.. +|.. |+..
T Consensus 294 g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~ 343 (361)
T 3scy_A 294 GTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLT 343 (361)
T ss_dssp CCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred CcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEe
Confidence 76533221111 12234567777875 888874 455544 5653 5544
No 185
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.41 E-value=1.2 Score=50.09 Aligned_cols=186 Identities=13% Similarity=0.077 Sum_probs=109.1
Q ss_pred CCEEEEEe--CCcEEEEcCCCCEEEEEeCCCCCCcccCeEEec-CCeEEEEE--CCeEEEEECCCCccccceeEEEecCC
Q 006913 47 DGKIYACS--EKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGG-TGEVYIVA--ENRVLKVDLLKIGTSESATQVFYGTG 121 (626)
Q Consensus 47 dG~IwIgS--dggL~a~d~~G~~~W~~~~~~~~~i~~sp~iD~-dG~IwVgT--~ggL~~id~~~~~~~~~~~~~~~~~~ 121 (626)
+|.||+.. .+.+++++.+|...-.+.... ......+.+|. .++||++. .+.|.+++.++.. .......
T Consensus 360 ~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~-~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~-----~~~l~~~- 432 (619)
T 3s94_A 360 EGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQ-IAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTM-----RKILISE- 432 (619)
T ss_dssp TTEEEEEETTTTEEEEEETTSCSCEEEECSS-CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS-----CEEEECT-
T ss_pred CCeEEEEeCCCCeEEEEEcCCCccEEEEECC-CCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCe-----EEEEEEC-
Confidence 68899886 467899988653211111111 01233567884 78899986 5788888887642 1222211
Q ss_pred CCCCCCCCeeEEEEEE-cCCeEEEEEcC--CeEEEEeCCCcEEEEECCcccccccccccccCCCCCccccceEEEcCCCe
Q 006913 122 SGKGGTGAIAGIAVST-SSSSVYINVKG--RALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGS 198 (626)
Q Consensus 122 ~~~~~~~~~I~s~~~d-~dG~LwIgT~~--gGL~a~d~~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~ 198 (626)
..... ..++.+ ..|.||+...+ ..|...+.+|...-.... ..+. ....+++|..+++
T Consensus 433 ----~l~~P-~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~--~~l~-------------~P~GlalD~~~~~ 492 (619)
T 3s94_A 433 ----DLEEP-RAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVN--TSLG-------------WPNGLALDYDEGK 492 (619)
T ss_dssp ----TCCSE-EEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC--SSCS-------------CEEEEEEETTTTE
T ss_pred ----CCCCe-eeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEEEe--CCCC-------------CCeeeEEcccCCE
Confidence 11122 334455 46999998753 568888887653222100 0000 1133677844789
Q ss_pred EEEEcC-CCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCCeEEEEEcCCCEEEEEECCCCcE
Q 006913 199 IYISNT-QGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNI 261 (626)
Q Consensus 199 LwIGT~-~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~tG~~ 261 (626)
||++.. .+.|.+++.++....-... ........++++ ++.||+.......+..+|+.+|+.
T Consensus 493 LY~aD~~~~~I~~~~~dG~~~~~~~~-~~l~~P~glav~-~~~ly~tD~~~~~I~~~~k~~g~~ 554 (619)
T 3s94_A 493 IYWGDAKTDKIEVMNTDGTGRRVLVE-DKIPHIFGFTLL-GDYVYWTDWQRRSIERVHKRSAER 554 (619)
T ss_dssp EEEEETTTTEEEEEESSSCCCEEEEE-CCCCSSCCEEEE-TTEEEEECTTSSCEEEEESSSCCE
T ss_pred EEEEECCCCEEEEEecCCCceEEEec-cCCCCcEEEEEE-CCEEEEeecCCCeEEEEEcCCCce
Confidence 998865 4678999987754432222 122234556666 459999877667888889888743
No 186
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.38 E-value=1.9 Score=48.72 Aligned_cols=221 Identities=12% Similarity=0.006 Sum_probs=126.7
Q ss_pred EEEEEeCCcEEEEcCCC-CEEEEEeCCCCCCcccCeEEec-CCeEEEEE--CCeEEEEECCCCccccceeEEEecCCCCC
Q 006913 49 KIYACSEKTLFAFESNG-TIAWSLDLDFTCNIGTAPVHGG-TGEVYIVA--ENRVLKVDLLKIGTSESATQVFYGTGSGK 124 (626)
Q Consensus 49 ~IwIgSdggL~a~d~~G-~~~W~~~~~~~~~i~~sp~iD~-dG~IwVgT--~ggL~~id~~~~~~~~~~~~~~~~~~~~~ 124 (626)
-|.+.....|.+++.++ ......+.... .....+..|. ++.||++. .+.|+++++++.. ........
T Consensus 8 ~Ll~s~~~~I~~i~l~~~~~~~~~~~~~~-~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~-----~~~v~~~g--- 78 (628)
T 4a0p_A 8 FLLFSRRADIRRISLETNNNNVAIPLTGV-KEASALDFDVTDNRIYWTDISLKTISRAFMNGSA-----LEHVVEFG--- 78 (628)
T ss_dssp EEEEEETTEEEEEESSCTTCEEECCCCSC-SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-----CEEEECSS---
T ss_pred EEEEEeCCcEEEEECCCCCcceEEEcCCC-CceEEEEEECCCCEEEEEECCCCeEEEEECCCCC-----cEEEEeCC---
Confidence 34445556677777633 22212222110 1122344553 68899886 6889999987642 12222111
Q ss_pred CCCCCeeEEEEEE-cCCeEEEEEcC-CeEEEEeCCCcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEE
Q 006913 125 GGTGAIAGIAVST-SSSSVYINVKG-RALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYIS 202 (626)
Q Consensus 125 ~~~~~~I~s~~~d-~dG~LwIgT~~-gGL~a~d~~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIG 202 (626)
.....+ +..| .+++||++... +.|..++.+|...-... . ..+. -...+++|+.+|.||+.
T Consensus 79 --~~~P~G-lAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~--------~----~~l~---~P~~iavdp~~G~lY~t 140 (628)
T 4a0p_A 79 --LDYPEG-MAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLV--------W----KDLD---SPRALALDPAEGFMYWT 140 (628)
T ss_dssp --CSCCCE-EEEETTTTEEEEEETTTTEEEEEETTSTTCEEEE--------C----SSCC---CEEEEEEETTTTEEEEE
T ss_pred --CCCcce-EEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEE--------e----CCCC---CcccEEEccCCCeEEEe
Confidence 011223 3344 67899887653 66888888765322110 0 0000 12446788557999998
Q ss_pred cC--CCeEEEEeCCCCeEEEEEcCCCCCcceeeeeec-CCeEEEEEcCCCEEEEEECCCCcEEEEEecCCCCCceeeEEE
Q 006913 203 NT--QGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGN-NGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPVV 279 (626)
Q Consensus 203 T~--~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~-dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~~~sspvv 279 (626)
.+ .+.|++++.++....-... .......++.|. +++||++......+..+|...+... ... ..+ .....+.+
T Consensus 141 D~g~~~~I~r~~~dG~~~~~l~~--~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~-v~~-~~l-~~P~glav 215 (628)
T 4a0p_A 141 EWGGKPKIDRAAMDGSERTTLVP--NVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNRE-VIA-DDL-PHPFGLTQ 215 (628)
T ss_dssp ECSSSCEEEEEETTSCSCEEEEC--SCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-EEE-ECC-SCEEEEEE
T ss_pred CCCCCCEEEEEeCCCCceEEEEC--CCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCceE-Eee-ccC-CCceEEEE
Confidence 75 4689999988765433322 233456788886 5799999877778988986543332 111 111 12345677
Q ss_pred eeCCeEEEEEc-CCeEEEEcC-CCC
Q 006913 280 DSNGWISVGSL-DGLLYSFSP-SGV 302 (626)
Q Consensus 280 D~dG~IWVGT~-~gGLy~~d~-~g~ 302 (626)
+ +++||+... ++.|+++|+ +|+
T Consensus 216 ~-~~~ly~tD~~~~~I~~~dk~tg~ 239 (628)
T 4a0p_A 216 Y-QDYIYWTDWSRRSIERANKTSGQ 239 (628)
T ss_dssp E-TTEEEEEETTTTEEEEEETTTCC
T ss_pred E-CCEEEEecCCCCEEEEEECCCCC
Confidence 7 578998875 678999996 454
No 187
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=96.38 E-value=0.97 Score=45.40 Aligned_cols=233 Identities=9% Similarity=0.001 Sum_probs=128.2
Q ss_pred ccCeEEecCCeEEEE-E-CCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEcCC-eEEEEEcCCeEEEEeC
Q 006913 80 GTAPVHGGTGEVYIV-A-ENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSS-SVYINVKGRALFAFMT 156 (626)
Q Consensus 80 ~~sp~iD~dG~IwVg-T-~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG-~LwIgT~~gGL~a~d~ 156 (626)
+.++....+|...+. . ++.|...|..++.. ...+. .... .+..+....++ .|..++.++-+..+|.
T Consensus 68 v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~-----~~~~~-----~h~~-~v~~~~~~~~~~~l~s~s~D~~i~vwd~ 136 (319)
T 3frx_A 68 VQDCTLTADGAYALSASWDKTLRLWDVATGET-----YQRFV-----GHKS-DVMSVDIDKKASMIISGSRDKTIKVWTI 136 (319)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTTEE-----EEEEE-----CCSS-CEEEEEECTTSCEEEEEETTSCEEEEET
T ss_pred EEEEEECCCCCEEEEEeCCCEEEEEECCCCCe-----eEEEc-----cCCC-cEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 344555667775554 4 78888899887631 11111 1112 34444444444 4666777788888888
Q ss_pred CCcEEEEECCcccccccccccccCCCCCccccceEE------EcCCCeEEEEcCCCeEEEEeCCCCeEEEEEcCCCCCcc
Q 006913 157 HGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVI------DQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKA 230 (626)
Q Consensus 157 ~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspvi------D~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s~~~v 230 (626)
+++.+..... +. ..+ ..... +.....|..+..++.|..+|.++++...... +....+
T Consensus 137 ~~~~~~~~~~------------h~---~~v-~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~-~h~~~v 199 (319)
T 3frx_A 137 KGQCLATLLG------------HN---DWV-SQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFI-GHNSNI 199 (319)
T ss_dssp TSCEEEEECC------------CS---SCE-EEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEEC-CCCSCE
T ss_pred CCCeEEEEec------------cC---CcE-EEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeec-CCCCcE
Confidence 7665443210 00 001 11111 1113357777788889999998876544322 112346
Q ss_pred eeeeeecCCeEEEEEcCCCEEEEEECCCCcEEEEEecCCCCCceeeEEEeeCCeEEEEEcCCeEEEEcCCCCEE-EEeec
Q 006913 231 FTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPVVDSNGWISVGSLDGLLYSFSPSGVLN-KFSKS 309 (626)
Q Consensus 231 ~sI~~D~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~~~sspvvD~dG~IWVGT~~gGLy~~d~~g~~~-~~~~~ 309 (626)
.++....+|.+.+....++.+...|..+++........ ..+.++...+++.+.++..++++..++.+.... .....
T Consensus 200 ~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~---~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~~~~~~~~~ 276 (319)
T 3frx_A 200 NTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQ---DEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRP 276 (319)
T ss_dssp EEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECC---SCEEEEEECSSSSEEEEEETTEEEEEEETTEEEEEEECC
T ss_pred EEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC---CcEEEEEEcCCCCEEEEEcCCCcEEEEeCcCeeeeccCc
Confidence 66777777865544435678888999888877655433 234557777788777666677888887654322 22211
Q ss_pred cCCCCccccCceEEEEEEecCCcEEEEEeeecCee
Q 006913 310 DTSDSVIQSSPYWFHLLGPSIGLKAILCLMVVGQF 344 (626)
Q Consensus 310 ~~~~~~ilssp~V~~Il~DsdG~IwI~T~t~~Ggl 344 (626)
..........+.+.++....+|... .++...|.+
T Consensus 277 ~~~~~~~~~~~~v~~~~~spdg~~l-~sg~~Dg~i 310 (319)
T 3frx_A 277 EFAGYSKAAEPHAVSLAWSADGQTL-FAGYTDNVI 310 (319)
T ss_dssp CCTTCCGGGCCCEEEEEECTTSSEE-EEEETTSCE
T ss_pred cccccccCcCcceeEEEECCCCCEE-EEeecCceE
Confidence 1111101123445566666777754 444444444
No 188
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=96.31 E-value=1 Score=45.02 Aligned_cols=201 Identities=11% Similarity=0.109 Sum_probs=114.2
Q ss_pred ccCeEEec-CCeEEEEE--CCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEcC-CeEEEEe
Q 006913 80 GTAPVHGG-TGEVYIVA--ENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKG-RALFAFM 155 (626)
Q Consensus 80 ~~sp~iD~-dG~IwVgT--~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~~-gGL~a~d 155 (626)
.+.+..+. .+.||+.+ ++.|+.+|+.+ + +....... . ..-...+....++.+|+.... +.|+.++
T Consensus 29 lSGla~~~~~~~L~aV~d~~~~I~~ld~~g-~-----v~~~i~l~----g-~~D~EGIa~~~~g~~~vs~E~~~~l~~~~ 97 (255)
T 3qqz_A 29 ISSLTWSAQSNTLFSTINKPAAIVEMTTNG-D-----LIRTIPLD----F-VKDLETIEYIGDNQFVISDERDYAIYVIS 97 (255)
T ss_dssp EEEEEEETTTTEEEEEEETTEEEEEEETTC-C-----EEEEEECS----S-CSSEEEEEECSTTEEEEEETTTTEEEEEE
T ss_pred cceeEEeCCCCEEEEEECCCCeEEEEeCCC-C-----EEEEEecC----C-CCChHHeEEeCCCEEEEEECCCCcEEEEE
Confidence 45566665 46799877 57899999984 2 12121111 0 012334455678888888644 6788777
Q ss_pred C--CCcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcCC--CeEEEEeC--CCCeEEEEEc--C--C
Q 006913 156 T--HGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQ--GELYSLSA--HSPYFNWIQD--L--S 225 (626)
Q Consensus 156 ~--~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~~--GgL~~ld~--~tg~~~w~~~--~--~ 225 (626)
. ++. ++.... ..++... ...+ ..+ -.+++|+.+++||++... ..||.++. .+..+.-..+ . .
T Consensus 98 v~~~~~-i~~~~~--~~~~~~~-~~~N---~g~-EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~ 169 (255)
T 3qqz_A 98 LTPNSE-VKILKK--IKIPLQE-SPTN---CGF-EGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQ 169 (255)
T ss_dssp ECTTCC-EEEEEE--EECCCSS-CCCS---SCC-EEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHT
T ss_pred cCCCCe-eeeeee--ecccccc-cccc---CCc-ceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccc
Confidence 4 354 232100 0111000 0111 111 346777645689998753 26888872 2222222111 0 0
Q ss_pred -CCCcceeeeee-cCCeEEEEEcCCCEEEEEECCCCcEEEEEecCC----CC---CceeeEEEeeCCeEEEEEcCCeEEE
Q 006913 226 -SFDKAFTLTPG-NNGYLYVTIPVRALVLALDTSSGNILWHKSVGP----LG---SAEYAPVVDSNGWISVGSLDGLLYS 296 (626)
Q Consensus 226 -s~~~v~sI~~D-~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~----l~---~~~sspvvD~dG~IWVGT~~gGLy~ 296 (626)
......+++.| ..|++||-+.....++.+|. +|+++-...+.+ +. ...-.++.|.+|+|||.+..+-+|+
T Consensus 170 ~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~-~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~n~~y~ 248 (255)
T 3qqz_A 170 FTLDDVSGAEFNQQKNTLLVLSHESRALQEVTL-VGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEPNRFYR 248 (255)
T ss_dssp CCSSCCCEEEEETTTTEEEEEETTTTEEEEECT-TCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETTTEEEE
T ss_pred cccCCceeEEEcCCCCeEEEEECCCCeEEEEcC-CCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCCceEEE
Confidence 11223456666 46799999987789999995 577665544432 10 1234578899999999999889999
Q ss_pred EcCC
Q 006913 297 FSPS 300 (626)
Q Consensus 297 ~d~~ 300 (626)
|.+.
T Consensus 249 f~~~ 252 (255)
T 3qqz_A 249 FTPQ 252 (255)
T ss_dssp EEC-
T ss_pred EEec
Confidence 9764
No 189
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=96.31 E-value=1.6 Score=47.18 Aligned_cols=239 Identities=9% Similarity=-0.055 Sum_probs=130.1
Q ss_pred eeeeEEeeCCE-EEEEeCCcEEEEcC-CC----CEEEEEeCCCCCCc-ccCeEEec--CCeEEE-EE-CCeEEEEECCCC
Q 006913 39 LSKPLIGEDGK-IYACSEKTLFAFES-NG----TIAWSLDLDFTCNI-GTAPVHGG--TGEVYI-VA-ENRVLKVDLLKI 107 (626)
Q Consensus 39 ~Sspvid~dG~-IwIgSdggL~a~d~-~G----~~~W~~~~~~~~~i-~~sp~iD~--dG~IwV-gT-~ggL~~id~~~~ 107 (626)
........+|. |.+++++.+..++. ++ .....+.... .. +.++.... +|++.+ +. ++.|..++..++
T Consensus 21 v~~~~~spdg~~l~~~~~~~v~v~~~~~~~~~~~~~~~~~~h~--~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~ 98 (615)
T 1pgu_A 21 TTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHG--SSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFD 98 (615)
T ss_dssp CCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTT--TSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEE
T ss_pred eeEEEECCCCCEEEEecCCeEEEEECCCCCCccccceEEecCC--CceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCC
Confidence 34445556665 44456777888887 66 4443332211 23 45666677 777554 44 677888777432
Q ss_pred ccc---cceeEEEecCCCCCCCCCCeeEEEEEEcCCe-EEEEEcC----CeEEEEeCCCcEEEEECCccccccccccccc
Q 006913 108 GTS---ESATQVFYGTGSGKGGTGAIAGIAVSTSSSS-VYINVKG----RALFAFMTHGQLLWSAGPVLDQLGYRQGCTK 179 (626)
Q Consensus 108 ~~~---~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~-LwIgT~~----gGL~a~d~~G~~~w~~~~~~~~~~~~~~~~~ 179 (626)
... .......+. .. ...+..+....++. |..++.+ +.|+.+| .++....... +
T Consensus 99 ~~~~~~~~~~~~~~~-----~~-~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d-~~~~~~~~~~------------~ 159 (615)
T 1pgu_A 99 KESNSVEVNVKSEFQ-----VL-AGPISDISWDFEGRRLCVVGEGRDNFGVFISWD-SGNSLGEVSG------------H 159 (615)
T ss_dssp GGGTEEEEEEEEEEE-----CC-SSCEEEEEECTTSSEEEEEECCSSCSEEEEETT-TCCEEEECCS------------C
T ss_pred cccccccccccchhh-----cc-cccEEEEEEeCCCCEEEEeccCCCCccEEEEEE-CCCcceeeec------------C
Confidence 000 000111111 11 12344444445554 5555543 3455555 3444333200 0
Q ss_pred CCCCCccccceEEEcCCC--eEEEEcCCCeEEEEeCCCCeEEEEEcCCCCC---cceeeeeecC-Ce-EEEEEcCCCEEE
Q 006913 180 TDVDCYFTSVPVIDQCEG--SIYISNTQGELYSLSAHSPYFNWIQDLSSFD---KAFTLTPGNN-GY-LYVTIPVRALVL 252 (626)
Q Consensus 180 ~l~~~~i~sspviD~~dG--~LwIGT~~GgL~~ld~~tg~~~w~~~~~s~~---~v~sI~~D~d-G~-LwVGT~~gG~l~ 252 (626)
...+ ..+...+ ++ .+..+..++.|..+|..+++........ .. .+.++....+ |. |..++ ..+.+.
T Consensus 160 ---~~~v-~~~~~~~-~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~-~dg~i~ 232 (615)
T 1pgu_A 160 ---SQRI-NACHLKQ-SRPMRSMTVGDDGSVVFYQGPPFKFSASDRTH-HKQGSFVRDVEFSPDSGEFVITVG-SDRKIS 232 (615)
T ss_dssp ---SSCE-EEEEECS-SSSCEEEEEETTTEEEEEETTTBEEEEEECSS-SCTTCCEEEEEECSTTCCEEEEEE-TTCCEE
T ss_pred ---CccE-EEEEECC-CCCcEEEEEeCCCcEEEEeCCCcceeeeeccc-CCCCceEEEEEECCCCCCEEEEEe-CCCeEE
Confidence 0111 3344443 44 5778888899999999887765543311 22 4666776666 65 55555 457888
Q ss_pred EEECCCCcEEEEEec---CCCCCceeeEEEeeCCeEEEEEcCCeEEEEcCC-CCEEEE
Q 006913 253 ALDTSSGNILWHKSV---GPLGSAEYAPVVDSNGWISVGSLDGLLYSFSPS-GVLNKF 306 (626)
Q Consensus 253 alD~~tG~~~w~~~~---~~l~~~~sspvvD~dG~IWVGT~~gGLy~~d~~-g~~~~~ 306 (626)
.+|..+++....... .. ...+..+.......++.++.++.|..+|.. ++....
T Consensus 233 vwd~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~ 289 (615)
T 1pgu_A 233 CFDGKSGEFLKYIEDDQEPV-QGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQK 289 (615)
T ss_dssp EEETTTCCEEEECCBTTBCC-CSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred EEECCCCCEeEEeccccccc-CCceEEEEEcCCCEEEEEcCCCcEEEEECCCCcEEEE
Confidence 899889988765511 21 123444555524467778888899999975 554443
No 190
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.29 E-value=0.13 Score=56.01 Aligned_cols=100 Identities=8% Similarity=0.122 Sum_probs=59.6
Q ss_pred ceEEEcCCCeEEEEcCCC-eEEEEeCCCCeEEEEEcCCC-------CCcceeeeeec----CCeEEEEEcC---------
Q 006913 189 VPVIDQCEGSIYISNTQG-ELYSLSAHSPYFNWIQDLSS-------FDKAFTLTPGN----NGYLYVTIPV--------- 247 (626)
Q Consensus 189 spviD~~dG~LwIGT~~G-gL~~ld~~tg~~~w~~~~~s-------~~~v~sI~~D~----dG~LwVGT~~--------- 247 (626)
.+..+. +|+|||+...+ .|++++..++...-...... ......++.+. +|.||+....
T Consensus 31 ~~a~~p-dG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~~ 109 (454)
T 1cru_A 31 ALLWGP-DNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTDKE 109 (454)
T ss_dssp EEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--CC
T ss_pred EEEEcC-CCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCccc
Confidence 356676 89999998876 49999876665543322221 12234567765 7899998632
Q ss_pred ---CCEEEEEECCC--CcE-----EEEEecCC-CCCceeeEEEeeCCeEEEEEc
Q 006913 248 ---RALVLALDTSS--GNI-----LWHKSVGP-LGSAEYAPVVDSNGWISVGSL 290 (626)
Q Consensus 248 ---gG~l~alD~~t--G~~-----~w~~~~~~-l~~~~sspvvD~dG~IWVGT~ 290 (626)
...|+.++... +.. +.. .... ..+....++++++|+|||++.
T Consensus 110 ~~~~~~v~r~~~~~~~~~~~~~~~i~~-~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 110 LPNQTIIRRYTYNKSTDTLEKPVDLLA-GLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp SCEEEEEEEEEEETTTTEEEEEEEEEE-EECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred cccccEEEEEEECCCCCCcCCcEEEEE-cCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 23566665322 222 111 1111 112356788999999999864
No 191
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.26 E-value=0.41 Score=54.04 Aligned_cols=194 Identities=16% Similarity=0.041 Sum_probs=107.9
Q ss_pred eeeEEe-eCCEEEEEe--CCcEEEEcCCCCEEEEEeCCCCCCcccCeEEec-CCeEEEEE--CCeEEEEECCCCccccce
Q 006913 40 SKPLIG-EDGKIYACS--EKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGG-TGEVYIVA--ENRVLKVDLLKIGTSESA 113 (626)
Q Consensus 40 Sspvid-~dG~IwIgS--dggL~a~d~~G~~~W~~~~~~~~~i~~sp~iD~-dG~IwVgT--~ggL~~id~~~~~~~~~~ 113 (626)
..+..+ .+|.||+.. .+.+++++.+|...+.............+.+|. .++||++. .+.|.+++.++..
T Consensus 43 ~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~----- 117 (619)
T 3s94_A 43 AAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL----- 117 (619)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-----
T ss_pred EEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCC-----
Confidence 344444 378899886 467888888664211111111101234567887 67899886 5789999987642
Q ss_pred eEEEecCCCCCCCCCCeeEEEEEE-cCCeEEEEEcC--CeEEEEeCCCcEEEEECCcccccccccccccCCCCCccccce
Q 006913 114 TQVFYGTGSGKGGTGAIAGIAVST-SSSSVYINVKG--RALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVP 190 (626)
Q Consensus 114 ~~~~~~~~~~~~~~~~~I~s~~~d-~dG~LwIgT~~--gGL~a~d~~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~ssp 190 (626)
........ . ... ..++.+ .+|.||+...+ ..|...+++|...-.... ..+ .....+
T Consensus 118 ~~~l~~~~----l-~~P-~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~------------~~~---~~P~Gl 176 (619)
T 3s94_A 118 RKVLFWQE----L-DQP-RAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIIN------------SEI---YWPNGL 176 (619)
T ss_dssp CEEEECSS----C-SCC-CCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC------------SSC---SSEEEE
T ss_pred EEEEEeCC----C-CCC-ceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEe------------CCC---CCCcEE
Confidence 12222111 0 111 123444 56899998754 578888888654322100 000 011336
Q ss_pred EEEcCCCeEEEEcC-CCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCCeEEEEEcCCCEEEEEECCCCcE
Q 006913 191 VIDQCEGSIYISNT-QGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNI 261 (626)
Q Consensus 191 viD~~dG~LwIGT~-~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~tG~~ 261 (626)
++|..+++||++.. .+.|.++|.++........ ........++.+.+ +||+.......+..+|+.+|+.
T Consensus 177 ald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~-~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~~ 246 (619)
T 3s94_A 177 TLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVK-GSLPHPFALTLFED-ILYWTDWSTHSILACNKYTGEG 246 (619)
T ss_dssp EEETTTTEEEEEETTTCCEEEESSSCCEEC----------CCCEEESSS-EEEEECTTTCSEEEEESSSCCC
T ss_pred EEEccCCEEEEEeCCCCeEEEecCCCCccEEEEe-CCCCCceEEEEeCC-EEEEecCCCCEEEEEECCCCcc
Confidence 77754788988864 5679999998754322211 11223455666644 8999876667888899888764
No 192
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=96.17 E-value=1.5 Score=45.53 Aligned_cols=148 Identities=11% Similarity=-0.002 Sum_probs=87.1
Q ss_pred CCeEEEEEcCCeEEEEeCC-CcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcCCCeEEEEeCCCCe
Q 006913 139 SSSVYINVKGRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPY 217 (626)
Q Consensus 139 dG~LwIgT~~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~~GgL~~ld~~tg~ 217 (626)
+..|..++.++.|..+|.. ++.+..+.. . .+ ... ..++...+.+..|..|+.+|.|..+|.++++
T Consensus 182 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-------~---~h---~~~-v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~ 247 (437)
T 3gre_A 182 KSLLVALTNLSRVIIFDIRTLERLQIIEN-------S---PR---HGA-VSSICIDEECCVLILGTTRGIIDIWDIRFNV 247 (437)
T ss_dssp CEEEEEEETTSEEEEEETTTCCEEEEEEC-------C---GG---GCC-EEEEEECTTSCEEEEEETTSCEEEEETTTTE
T ss_pred CCEEEEEeCCCeEEEEeCCCCeeeEEEcc-------C---CC---CCc-eEEEEECCCCCEEEEEcCCCeEEEEEcCCcc
Confidence 3456677888889999974 777665410 0 00 011 2344555424457778888889999999877
Q ss_pred EEEEEcCCCCCcceee----eeecCCeEEEEEcCCCEEEEEECCCCcEEEEEecCC------------------------
Q 006913 218 FNWIQDLSSFDKAFTL----TPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGP------------------------ 269 (626)
Q Consensus 218 ~~w~~~~~s~~~v~sI----~~D~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~------------------------ 269 (626)
............+.++ ....++.+.+....++.+..+|..+++.........
T Consensus 248 ~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 327 (437)
T 3gre_A 248 LIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIR 327 (437)
T ss_dssp EEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCC
T ss_pred EEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccc
Confidence 6554332222234444 223456555544455678889988888765443110
Q ss_pred CCCceeeEEEeeCCeEEEEEcCCeEEEEcCC
Q 006913 270 LGSAEYAPVVDSNGWISVGSLDGLLYSFSPS 300 (626)
Q Consensus 270 l~~~~sspvvD~dG~IWVGT~~gGLy~~d~~ 300 (626)
....+.++..+.+..|..|+.++.|..+|..
T Consensus 328 ~~~~v~~l~~~~~~~l~s~~~d~~i~~wd~~ 358 (437)
T 3gre_A 328 SLNALSTISVSNDKILLTDEATSSIVMFSLN 358 (437)
T ss_dssp SGGGGCCEEEETTEEEEEEGGGTEEEEEETT
T ss_pred cCCceEEEEECCceEEEecCCCCeEEEEECC
Confidence 0011334556633357777888999999964
No 193
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=96.14 E-value=2.4 Score=47.60 Aligned_cols=245 Identities=13% Similarity=0.064 Sum_probs=121.3
Q ss_pred ceeeeeEEeeCCE-EEEEe--CC-----cEEEEcC-CCCEEEEEeCCCCC----------------------CcccCeEE
Q 006913 37 FRLSKPLIGEDGK-IYACS--EK-----TLFAFES-NGTIAWSLDLDFTC----------------------NIGTAPVH 85 (626)
Q Consensus 37 ~~~Sspvid~dG~-IwIgS--dg-----gL~a~d~-~G~~~W~~~~~~~~----------------------~i~~sp~i 85 (626)
.....+....||. |+.++ ++ .|+.+|. +|+........... ..+.++..
T Consensus 37 ~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 116 (741)
T 2ecf_A 37 PTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQW 116 (741)
T ss_dssp CCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEE
T ss_pred CCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEE
Confidence 3456777777886 44444 34 5889997 67654322211000 01356677
Q ss_pred ecCCe-EEEEECCeEEEEECCCC---ccccceeEEEecCCCCCCCCCCeeEEEEEEcCCe-EEEEEcCCeEEEEeCC-Cc
Q 006913 86 GGTGE-VYIVAENRVLKVDLLKI---GTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSS-VYINVKGRALFAFMTH-GQ 159 (626)
Q Consensus 86 D~dG~-IwVgT~ggL~~id~~~~---~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~-LwIgT~~gGL~a~d~~-G~ 159 (626)
..+|+ |.++..+.|+.+|..++ .. ... ......+..+....||+ |.+++ ++.|+.+|.. |+
T Consensus 117 SpDg~~l~~~~~~~i~~~d~~~~~~~~~----~~l--------~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~ 183 (741)
T 2ecf_A 117 SPDAQRLLFPLGGELYLYDLKQEGKAAV----RQL--------THGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGR 183 (741)
T ss_dssp CTTSSEEEEEETTEEEEEESSSCSTTSC----CBC--------CCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTE
T ss_pred CCCCCEEEEEeCCcEEEEECCCCCcceE----EEc--------ccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCC
Confidence 78887 44455788999998765 21 000 00112334444455665 54444 5689999976 54
Q ss_pred EEEEECCcccccccccccccCCCCCc-------cccceEEEcCCCeEEEEcCCC--------------------------
Q 006913 160 LLWSAGPVLDQLGYRQGCTKTDVDCY-------FTSVPVIDQCEGSIYISNTQG-------------------------- 206 (626)
Q Consensus 160 ~~w~~~~~~~~~~~~~~~~~~l~~~~-------i~sspviD~~dG~LwIGT~~G-------------------------- 206 (626)
..... . . + ......... .. ....+...+.+..|+++..++
T Consensus 184 ~~~~~-~---~-~-~~~~~~g~~-~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~ 256 (741)
T 2ecf_A 184 QMQLT-A---D-G-STTIGNGIA-EFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAA 256 (741)
T ss_dssp EEECC-C---C-C-CSSEEESCC-CHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBT
T ss_pred EEEec-c---C-C-ccceecccc-ceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCC
Confidence 43211 0 0 0 000000000 00 012234433123355554332
Q ss_pred -------eEEEEeCCC-CeEEEEEcC-CCCCcceeeeeecCC-eEEEEEc----CCCEEEEEECCCCcEEEEEecCC--C
Q 006913 207 -------ELYSLSAHS-PYFNWIQDL-SSFDKAFTLTPGNNG-YLYVTIP----VRALVLALDTSSGNILWHKSVGP--L 270 (626)
Q Consensus 207 -------gL~~ld~~t-g~~~w~~~~-~s~~~v~sI~~D~dG-~LwVGT~----~gG~l~alD~~tG~~~w~~~~~~--l 270 (626)
.|+.+|.++ ++....... .....+..+.. .|| .|+++.. ....++.+|..+|+......... .
T Consensus 257 g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~ 335 (741)
T 2ecf_A 257 GDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTW 335 (741)
T ss_dssp TSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSC
T ss_pred CCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCc
Confidence 678888887 776544221 11122334444 556 4555442 12468888988887654332211 0
Q ss_pred CCceeeEEEeeCCeEEEE-EcCC--eEEEEcCCCC
Q 006913 271 GSAEYAPVVDSNGWISVG-SLDG--LLYSFSPSGV 302 (626)
Q Consensus 271 ~~~~sspvvD~dG~IWVG-T~~g--GLy~~d~~g~ 302 (626)
......+...+||.+++. ..++ .||.++.+++
T Consensus 336 ~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~ 370 (741)
T 2ecf_A 336 VPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK 370 (741)
T ss_dssp CCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC
T ss_pred CCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC
Confidence 001234566667765444 4333 5888886665
No 194
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=96.09 E-value=1.4 Score=45.44 Aligned_cols=199 Identities=11% Similarity=-0.001 Sum_probs=108.5
Q ss_pred ccCeEEec-CCeEEE-EE-CCeEEEEECCCCcccc---ceeEEEecCCCCCCCCCCeeEEEEEEcCC--eEEEEEcCCeE
Q 006913 80 GTAPVHGG-TGEVYI-VA-ENRVLKVDLLKIGTSE---SATQVFYGTGSGKGGTGAIAGIAVSTSSS--SVYINVKGRAL 151 (626)
Q Consensus 80 ~~sp~iD~-dG~IwV-gT-~ggL~~id~~~~~~~~---~~~~~~~~~~~~~~~~~~~I~s~~~d~dG--~LwIgT~~gGL 151 (626)
+.++.... ++++.+ ++ ++.|..++..++.... ....... .. ...+..+....++ .|..++.++-|
T Consensus 84 V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~------~h-~~~v~~~~~~p~~~~~l~s~~~dg~i 156 (402)
T 2aq5_A 84 VLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLE------GH-TKRVGIVAWHPTAQNVLLSAGCDNVI 156 (402)
T ss_dssp EEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEE------CC-SSCEEEEEECSSBTTEEEEEETTSCE
T ss_pred EEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEec------CC-CCeEEEEEECcCCCCEEEEEcCCCEE
Confidence 34455555 565544 45 6778888877652110 0011111 11 1234444444443 56677777889
Q ss_pred EEEeCC-CcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcCCCeEEEEeCCCCeEEEEE-cCCCCCc
Q 006913 152 FAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQ-DLSSFDK 229 (626)
Q Consensus 152 ~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~~GgL~~ld~~tg~~~w~~-~~~s~~~ 229 (626)
..+|.. ++....+.. .. + ... ..++...+.+..|..++.++.|..+|.++++..... .......
T Consensus 157 ~iwd~~~~~~~~~~~~----~~------~---~~~-v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 222 (402)
T 2aq5_A 157 LVWDVGTGAAVLTLGP----DV------H---PDT-IYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTR 222 (402)
T ss_dssp EEEETTTTEEEEEECT----TT------C---CSC-EEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSS
T ss_pred EEEECCCCCccEEEec----CC------C---CCc-eEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCc
Confidence 999975 665544300 00 0 011 133444432456778888999999999998876654 2111122
Q ss_pred ceeeeeecCCeEEEEE---cCCCEEEEEECCCCcE-EEEEecCCCCCceeeEEEeeCCe-EEEE-EcCCeEEEEcCC
Q 006913 230 AFTLTPGNNGYLYVTI---PVRALVLALDTSSGNI-LWHKSVGPLGSAEYAPVVDSNGW-ISVG-SLDGLLYSFSPS 300 (626)
Q Consensus 230 v~sI~~D~dG~LwVGT---~~gG~l~alD~~tG~~-~w~~~~~~l~~~~sspvvD~dG~-IWVG-T~~gGLy~~d~~ 300 (626)
+..+....+|.+.+.. ...+.+..+|..++.. ........ ...+..+..+++|. ++++ +.++.|..++..
T Consensus 223 ~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~ 298 (402)
T 2aq5_A 223 PVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDT-SSGVLLPFFDPDTNIVYLCGKGDSSIRYFEIT 298 (402)
T ss_dssp CCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCC-CSSCEEEEEETTTTEEEEEETTCSCEEEEEEC
T ss_pred ceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccC-CCceeEEEEcCCCCEEEEEEcCCCeEEEEEec
Confidence 4455555678766654 3456888888877653 22222221 12245567776765 4444 457888888854
No 195
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=96.06 E-value=1.3 Score=43.76 Aligned_cols=234 Identities=11% Similarity=0.009 Sum_probs=125.2
Q ss_pred ccCeEEecCCeEEEE-E-CCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEE-EcCCeEEEEEcCCeEEEEeC
Q 006913 80 GTAPVHGGTGEVYIV-A-ENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVS-TSSSSVYINVKGRALFAFMT 156 (626)
Q Consensus 80 ~~sp~iD~dG~IwVg-T-~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~-d~dG~LwIgT~~gGL~a~d~ 156 (626)
+.++....+|++.+. . ++.+...+...... ...... . ...+..... ..+..|..++.++.+..+|.
T Consensus 89 V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~-----~~~~~~-----~-~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~ 157 (340)
T 4aow_A 89 VSDVVISSDGQFALSGSWDGTLRLWDLTTGTT-----TRRFVG-----H-TKDVLSVAFSSDNRQIVSGSRDKTIKLWNT 157 (340)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTTEE-----EEEEEC-----C-SSCEEEEEECTTSSCEEEEETTSCEEEECT
T ss_pred EEEEEECCCCCEEEEEcccccceEEeecccce-----eeeecC-----C-CCceeEEEEeecCccceeecCCCeEEEEEe
Confidence 445566677775554 4 67787788766421 111111 1 112222222 23445667777777888887
Q ss_pred CCcEEEEECCcccccccccccccCCCCCccccceEE--EcCCCe-EEEEcCCCeEEEEeCCCCeEEEEEcCCCCCcceee
Q 006913 157 HGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVI--DQCEGS-IYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTL 233 (626)
Q Consensus 157 ~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspvi--D~~dG~-LwIGT~~GgL~~ld~~tg~~~w~~~~~s~~~v~sI 233 (626)
.+........ .+ . ...+ ..... +. .+. +..+..++.|..+|.++++....... ....+.++
T Consensus 158 ~~~~~~~~~~----~~------~---~~~v-~~~~~~~~~-~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~-h~~~v~~~ 221 (340)
T 4aow_A 158 LGVCKYTVQD----ES------H---SEWV-SCVRFSPNS-SNPIIVSCGWDKLVKVWNLANCKLKTNHIG-HTGYLNTV 221 (340)
T ss_dssp TSCEEEEECS----SS------C---SSCE-EEEEECSCS-SSCEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEE
T ss_pred CCCceEEEEe----cc------c---cCcc-cceEEccCC-CCcEEEEEcCCCEEEEEECCCCceeeEecC-CCCcEEEE
Confidence 5433332200 00 0 0011 11222 21 233 34455677889999998876554321 12346677
Q ss_pred eeecCCeEEEEEcCCCEEEEEECCCCcEEEEEecCCCCCceeeEEEeeCCeEEEEEcCCeEEEEcCCCCE-EEEeeccC-
Q 006913 234 TPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPVVDSNGWISVGSLDGLLYSFSPSGVL-NKFSKSDT- 311 (626)
Q Consensus 234 ~~D~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~~~sspvvD~dG~IWVGT~~gGLy~~d~~g~~-~~~~~~~~- 311 (626)
....+|.+.+.....+.+..+|..++......... ..+..+...+++.+..++.++.|..+|..+.. ........
T Consensus 222 ~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 298 (340)
T 4aow_A 222 TVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG---DIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVI 298 (340)
T ss_dssp EECTTSSEEEEEETTCEEEEEETTTTEEEEEEECS---SCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCC--
T ss_pred EECCCCCEEEEEeCCCeEEEEEeccCceeeeecCC---ceEEeeecCCCCceeeccCCCEEEEEECCCCeEEEeccccce
Confidence 77777765544334578888998888777655433 23455666778888899889999999976443 32222100
Q ss_pred CCCccccCceEEEEEEecCCcEEEEEeeecCee
Q 006913 312 SDSVIQSSPYWFHLLGPSIGLKAILCLMVVGQF 344 (626)
Q Consensus 312 ~~~~ilssp~V~~Il~DsdG~IwI~T~t~~Ggl 344 (626)
..........|.++....+|... .++...|.+
T Consensus 299 ~~~~~~h~~~v~~l~~s~dg~~l-~sgs~Dg~v 330 (340)
T 4aow_A 299 STSSKAEPPQCTSLAWSADGQTL-FAGYTDNLV 330 (340)
T ss_dssp -----CCCCCEEEEEECTTSSEE-EEEETTSCE
T ss_pred eeeccCCCCCEEEEEECCCCCEE-EEEeCCCEE
Confidence 00000123446666666677654 444444444
No 196
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=96.04 E-value=2.6 Score=47.21 Aligned_cols=195 Identities=10% Similarity=0.031 Sum_probs=108.3
Q ss_pred eEEeeCCEEEE-Ee-CCcEEEEcC-CCCEEEEEeCCCCCCcccCeEEecCCeEEE-EE-CCeEEEEECCCCccccceeEE
Q 006913 42 PLIGEDGKIYA-CS-EKTLFAFES-NGTIAWSLDLDFTCNIGTAPVHGGTGEVYI-VA-ENRVLKVDLLKIGTSESATQV 116 (626)
Q Consensus 42 pvid~dG~IwI-gS-dggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~dG~IwV-gT-~ggL~~id~~~~~~~~~~~~~ 116 (626)
.....+|.+.+ |+ ++.+..+|. ++.....+.... ..+.++....++...+ ++ ++.|...|..+. ...
T Consensus 436 v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~--~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~------~~~ 507 (694)
T 3dm0_A 436 VVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHT--KDVLSVAFSLDNRQIVSASRDRTIKLWNTLGE------CKY 507 (694)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCS--SCEEEEEECTTSSCEEEEETTSCEEEECTTSC------EEE
T ss_pred EEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCC--CCEEEEEEeCCCCEEEEEeCCCEEEEEECCCC------cce
Confidence 34445665544 55 567888887 666544332211 2344555566666444 45 677888886543 122
Q ss_pred EecCCCCCCCCCCeeEEEEEEcC---CeEEEEEcCCeEEEEeCC-CcEEEEECCcccccccccccccCCCCCccccceEE
Q 006913 117 FYGTGSGKGGTGAIAGIAVSTSS---SSVYINVKGRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVI 192 (626)
Q Consensus 117 ~~~~~~~~~~~~~~I~s~~~d~d---G~LwIgT~~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspvi 192 (626)
..... ...+ ...+..+....+ ..|..++.++.|..+|.. ++....... + ... ..++..
T Consensus 508 ~~~~~-~~~h-~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~------------h---~~~-v~~v~~ 569 (694)
T 3dm0_A 508 TISEG-GEGH-RDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAG------------H---TGY-VSTVAV 569 (694)
T ss_dssp EECSS-TTSC-SSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECC------------C---SSC-EEEEEE
T ss_pred eeccC-CCCC-CCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcC------------C---CCC-EEEEEE
Confidence 22111 0111 123444333333 357777888889899975 655443210 0 011 234455
Q ss_pred EcCCCeEEEEcCCCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCCeEEEEEcCCCEEEEEECCCCcEEEEE
Q 006913 193 DQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHK 265 (626)
Q Consensus 193 D~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~tG~~~w~~ 265 (626)
.+.+..|..|+.++.|..+|..+++...... ....+.+++...++.+.++.. .+.+...|..++......
T Consensus 570 spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~--~~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~ 639 (694)
T 3dm0_A 570 SPDGSLCASGGKDGVVLLWDLAEGKKLYSLE--ANSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDL 639 (694)
T ss_dssp CTTSSEEEEEETTSBCEEEETTTTEEEECCB--CSSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEE
T ss_pred eCCCCEEEEEeCCCeEEEEECCCCceEEEec--CCCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhh
Confidence 5423446667778889999999887654322 122355666666777666654 456888898888776543
No 197
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=96.03 E-value=0.12 Score=52.83 Aligned_cols=238 Identities=8% Similarity=-0.051 Sum_probs=113.5
Q ss_pred eeeEEeeCCEEEE-Ee-CCcEEEEcC-CCCEEEEEeCCCCCCcccCeEEecCCeEE-EEE-CCeEEEEECCCCcccccee
Q 006913 40 SKPLIGEDGKIYA-CS-EKTLFAFES-NGTIAWSLDLDFTCNIGTAPVHGGTGEVY-IVA-ENRVLKVDLLKIGTSESAT 114 (626)
Q Consensus 40 Sspvid~dG~IwI-gS-dggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~dG~Iw-VgT-~ggL~~id~~~~~~~~~~~ 114 (626)
.......+|.+.+ |+ ++.+..+|. ++...-...+......+.++....+|++. .++ ++.|..+|..++.. +. .
T Consensus 15 ~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~-~~-~ 92 (377)
T 3dwl_C 15 YEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGT-WK-Q 92 (377)
T ss_dssp SCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------C-CC-C
T ss_pred EEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCc-ee-e
Confidence 3444445666544 43 556777776 44211111111111234455566666644 445 67888888766420 00 0
Q ss_pred EEEecCCCCCCCCCCeeEEEEEEcC-CeEEEEEcCCeEEEEeCC-CcEEEEECCcccccccccccccCCCCCccccceEE
Q 006913 115 QVFYGTGSGKGGTGAIAGIAVSTSS-SSVYINVKGRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVI 192 (626)
Q Consensus 115 ~~~~~~~~~~~~~~~~I~s~~~d~d-G~LwIgT~~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspvi 192 (626)
...+. .. ...+..+....+ ..|..++.++.|..+|.+ ++. |... ..+. . .+ ... ..++..
T Consensus 93 ~~~~~-----~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~-~~~~---~~~~--~--~h---~~~-v~~~~~ 154 (377)
T 3dwl_C 93 TLVLL-----RL-NRAATFVRWSPNEDKFAVGSGARVISVCYFEQEND-WWVS---KHLK--R--PL---RST-ILSLDW 154 (377)
T ss_dssp EEECC-----CC-SSCEEEEECCTTSSCCEEEESSSCEEECCC------CCCC---EEEC--S--SC---CSC-EEEEEE
T ss_pred eeEec-----cc-CCceEEEEECCCCCEEEEEecCCeEEEEEECCccc-ceee---eEee--c--cc---CCC-eEEEEE
Confidence 11110 11 123333333334 457777777778888865 432 1100 0000 0 00 011 233444
Q ss_pred EcCCCeEEEEcCCCeEEEEeCCCCe----------------EEEEEcCCCCCcceeeeeecCCe-EEEEEcCCCEEEEEE
Q 006913 193 DQCEGSIYISNTQGELYSLSAHSPY----------------FNWIQDLSSFDKAFTLTPGNNGY-LYVTIPVRALVLALD 255 (626)
Q Consensus 193 D~~dG~LwIGT~~GgL~~ld~~tg~----------------~~w~~~~~s~~~v~sI~~D~dG~-LwVGT~~gG~l~alD 255 (626)
.+.+..|..|+.++.|..+|.+.+. -...........+.++....+|. |..++ .++.+..+|
T Consensus 155 ~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~d~~i~iwd 233 (377)
T 3dwl_C 155 HPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAG-HDSSVTIAY 233 (377)
T ss_dssp CTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEE-TTTEEC-CE
T ss_pred cCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEe-CCCcEEEEE
Confidence 4424457778788888888875321 11111112123456666667775 55555 456787778
Q ss_pred CCCCcE----EEEEecCCCCCceeeEEEeeCCeEEEEEcCCeEEEEcCC
Q 006913 256 TSSGNI----LWHKSVGPLGSAEYAPVVDSNGWISVGSLDGLLYSFSPS 300 (626)
Q Consensus 256 ~~tG~~----~w~~~~~~l~~~~sspvvD~dG~IWVGT~~gGLy~~d~~ 300 (626)
..++.. ....... ...+.++...++|.+.+...++++..++..
T Consensus 234 ~~~~~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~~~~~~~~~~~~~~ 280 (377)
T 3dwl_C 234 PSAPEQPPRALITVKLS--QLPLRSLLWANESAIVAAGYNYSPILLQGN 280 (377)
T ss_dssp ECSTTSCEEECCCEECS--SSCEEEEEEEETTEEEEEESSSSEEEECCC
T ss_pred CCCCCCcceeeEeecCC--CCceEEEEEcCCCCEEEEEcCCcEEEEEeC
Confidence 777764 2111111 123455777778888887778888888764
No 198
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=96.00 E-value=2.6 Score=46.87 Aligned_cols=237 Identities=10% Similarity=0.035 Sum_probs=123.7
Q ss_pred EeeCCEEEEEe--CCcEEEEcC-CCCEEEEEeCCCCCCcccCeEEecCCe-EEEEE-CCeEEEEECC--CCccccceeEE
Q 006913 44 IGEDGKIYACS--EKTLFAFES-NGTIAWSLDLDFTCNIGTAPVHGGTGE-VYIVA-ENRVLKVDLL--KIGTSESATQV 116 (626)
Q Consensus 44 id~dG~IwIgS--dggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~dG~-IwVgT-~ggL~~id~~--~~~~~~~~~~~ 116 (626)
.|.++.+|++. ++.+..+|. +++.+..+..+. ....+.++.+|+ +|++. ++.|..||.. +.+ ...
T Consensus 163 ~d~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~---~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~-----~v~ 234 (567)
T 1qks_A 163 WDLENLFSVTLRDAGQIALIDGSTYEIKTVLDTGY---AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPT-----TVA 234 (567)
T ss_dssp CCGGGEEEEEETTTTEEEEEETTTCCEEEEEECSS---CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCC-----EEE
T ss_pred cCCCceEEEEeCCCCeEEEEECCCCeEEEEEeCCC---CccceEECCCCCEEEEEcCCCeEEEEECCCCCCc-----EeE
Confidence 33456778776 467999998 788877666542 233566777776 78877 6899999985 432 111
Q ss_pred EecCCCCCCCCCCeeEEEEEE----cCCeEEEEEcC-CeEEEEeC-CCcEEEEECCcccccccccccccCCCCCccccce
Q 006913 117 FYGTGSGKGGTGAIAGIAVST----SSSSVYINVKG-RALFAFMT-HGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVP 190 (626)
Q Consensus 117 ~~~~~~~~~~~~~~I~s~~~d----~dG~LwIgT~~-gGL~a~d~-~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~ssp 190 (626)
.... . .......+.. .+..+|++.+. +.+..+|. +.+.+..... ...... ........-...+
T Consensus 235 ~i~~-----G-~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~--~~~~~~---~~~~~p~~rva~i 303 (567)
T 1qks_A 235 EIKI-----G-SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQST--RGMTYD---EQEYHPEPRVAAI 303 (567)
T ss_dssp EEEC-----C-SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEEC--CEECTT---TCCEESCCCEEEE
T ss_pred EEec-----C-CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEec--cccccc---cccccCCCceEEE
Confidence 1111 0 1122223321 34478888765 77888996 4777665310 000000 0000000000112
Q ss_pred EEEcCCCeE-EEEcC-CCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCCe-EEEEEcCCCEEEEEECCCCcEEEEEec
Q 006913 191 VIDQCEGSI-YISNT-QGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGY-LYVTIPVRALVLALDTSSGNILWHKSV 267 (626)
Q Consensus 191 viD~~dG~L-wIGT~-~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG~-LwVGT~~gG~l~alD~~tG~~~w~~~~ 267 (626)
+... ++.. ++... .|.|..+|..+....-............+..+.+|+ +|++......+..+|.++++.......
T Consensus 304 ~~s~-~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~v 382 (567)
T 1qks_A 304 LASH-YRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDT 382 (567)
T ss_dssp EECS-SSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEEC
T ss_pred EEcC-CCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEec
Confidence 2221 2223 33222 355666666543211111111111233455677775 677765567888999999998877666
Q ss_pred -CCCCCc-eeeEEEeeC-CeEEEEEc--CCeEEEEcCC
Q 006913 268 -GPLGSA-EYAPVVDSN-GWISVGSL--DGLLYSFSPS 300 (626)
Q Consensus 268 -~~l~~~-~sspvvD~d-G~IWVGT~--~gGLy~~d~~ 300 (626)
+..... ...-..+++ |.+|+.+. ++.|..++.+
T Consensus 383 gg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~ 420 (567)
T 1qks_A 383 GGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTD 420 (567)
T ss_dssp SSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECC
T ss_pred cCcCCCCccceeeECCCCCcEEEeCCCCCCeEEEecCC
Confidence 321000 011124554 78998663 3678888854
No 199
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=95.83 E-value=1.7 Score=43.19 Aligned_cols=257 Identities=9% Similarity=-0.085 Sum_probs=135.8
Q ss_pred ceeeeeEEeeC---CEEE-EEe-CCcEEEEcC-C-CCEE-EEEeCCCCCCcccCeEEecCCeE-EEEE-CCeEEEEECCC
Q 006913 37 FRLSKPLIGED---GKIY-ACS-EKTLFAFES-N-GTIA-WSLDLDFTCNIGTAPVHGGTGEV-YIVA-ENRVLKVDLLK 106 (626)
Q Consensus 37 ~~~Sspvid~d---G~Iw-IgS-dggL~a~d~-~-G~~~-W~~~~~~~~~i~~sp~iD~dG~I-wVgT-~ggL~~id~~~ 106 (626)
..........+ |.+. .|+ ++.+..+|. + +... ....... ..+.++....++.. ..++ ++.|..+|..+
T Consensus 40 ~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~--~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~ 117 (368)
T 3mmy_A 40 DSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHT--GPVLDVCWSDDGSKVFTASCDKTAKMWDLSS 117 (368)
T ss_dssp SCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECS--SCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred CceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEecccc--CCEEEEEECcCCCEEEEEcCCCcEEEEEcCC
Confidence 34445555555 4544 455 566777776 3 5443 2221111 23445556667764 4455 67888899887
Q ss_pred CccccceeEEEecCCCCCCCCCCeeEEEEE--EcCCe-EEEEEcCCeEEEEeCC-CcEEEEECCcccccccccccccCCC
Q 006913 107 IGTSESATQVFYGTGSGKGGTGAIAGIAVS--TSSSS-VYINVKGRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDV 182 (626)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~--d~dG~-LwIgT~~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~ 182 (626)
+.. ..... ... .+..+.. ..++. |..++.++.|..+|.. ++....+.. .
T Consensus 118 ~~~-----~~~~~------~~~-~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~-------~-------- 170 (368)
T 3mmy_A 118 NQA-----IQIAQ------HDA-PVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQL-------P-------- 170 (368)
T ss_dssp TEE-----EEEEE------CSS-CEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEEC-------S--------
T ss_pred CCc-----eeecc------ccC-ceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEec-------C--------
Confidence 631 11111 112 3333333 45555 6667777888889964 655443300 0
Q ss_pred CCccccceEEEcCCCeEEEEcCCCeEEEEeCCCCeEEEEEcCCC-CCccee--eeeecCC---eEEEEEcCCCEEEEEEC
Q 006913 183 DCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSS-FDKAFT--LTPGNNG---YLYVTIPVRALVLALDT 256 (626)
Q Consensus 183 ~~~i~sspviD~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s-~~~v~s--I~~D~dG---~LwVGT~~gG~l~alD~ 256 (626)
... ...... ...+++++.++.+..++.+.....+...... ...... +..+... .+.+++. ++.+..+|.
T Consensus 171 -~~~-~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dg~i~i~~~ 245 (368)
T 3mmy_A 171 -ERC-YCADVI--YPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSI-EGRVAIHYI 245 (368)
T ss_dssp -SCE-EEEEEE--TTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEET-TSEEEEEES
T ss_pred -CCc-eEEEec--CCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecC-CCcEEEEec
Confidence 001 112233 5678888888899999998866555432211 111222 2222111 1666664 567777776
Q ss_pred CCCc---EEEEEecCCC--------C--CceeeEEEeeCC-eEEEEEcCCeEEEEcCC-CCEEEEeeccCCCCccccCce
Q 006913 257 SSGN---ILWHKSVGPL--------G--SAEYAPVVDSNG-WISVGSLDGLLYSFSPS-GVLNKFSKSDTSDSVIQSSPY 321 (626)
Q Consensus 257 ~tG~---~~w~~~~~~l--------~--~~~sspvvD~dG-~IWVGT~~gGLy~~d~~-g~~~~~~~~~~~~~~ilssp~ 321 (626)
.++. .......... . ..+.++...++| .|..|+.++.|..+|.. ++...... .....
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--------~~~~~ 317 (368)
T 3mmy_A 246 NPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSE--------QLDQP 317 (368)
T ss_dssp SCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECC--------CCSSC
T ss_pred CCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEec--------CCCCC
Confidence 6552 1222111100 0 024456666665 67788889999999975 54443322 11234
Q ss_pred EEEEEEecCCcEEE
Q 006913 322 WFHLLGPSIGLKAI 335 (626)
Q Consensus 322 V~~Il~DsdG~IwI 335 (626)
|.++....+|...+
T Consensus 318 v~~~~~s~~g~~l~ 331 (368)
T 3mmy_A 318 ISACCFNHNGNIFA 331 (368)
T ss_dssp EEEEEECTTSSCEE
T ss_pred ceEEEECCCCCeEE
Confidence 66777777887653
No 200
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=95.80 E-value=2.4 Score=45.00 Aligned_cols=211 Identities=10% Similarity=0.001 Sum_probs=109.4
Q ss_pred eEEeeCC-EEEEEe---CCcEEEEcC-CCCEEEEEeCCCCCCcccCeEEecCCeEEEEE-CCeEEEEECCC-Ccccccee
Q 006913 42 PLIGEDG-KIYACS---EKTLFAFES-NGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVA-ENRVLKVDLLK-IGTSESAT 114 (626)
Q Consensus 42 pvid~dG-~IwIgS---dggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~dG~IwVgT-~ggL~~id~~~-~~~~~~~~ 114 (626)
..+..|| .+|++. ++.+..+|. +++.+-.+..+. + . .+.-.....++..+ +|.+..++... ++.
T Consensus 142 ~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g-~-~--~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v----- 212 (386)
T 3sjl_D 142 TSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD-C-Y--HIFPTAPDTFFMHCRDGSLAKVAFGTEGTP----- 212 (386)
T ss_dssp EEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS-E-E--EEEEEETTEEEEEETTSCEEEEECCSSSCC-----
T ss_pred EEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC-c-c--eeecCCCceeEEECCCCCEEEEECCCCCeE-----
Confidence 3555565 588875 357899998 777765555432 1 0 01111122333334 67777777654 321
Q ss_pred EEEecCCCCCCCCCCeeE-EEEEEcCCeEEEEEcCCeEEEEeCCCcEEEEECCcccccccccc-cccCCCCCccccceEE
Q 006913 115 QVFYGTGSGKGGTGAIAG-IAVSTSSSSVYINVKGRALFAFMTHGQLLWSAGPVLDQLGYRQG-CTKTDVDCYFTSVPVI 192 (626)
Q Consensus 115 ~~~~~~~~~~~~~~~~I~-s~~~d~dG~LwIgT~~gGL~a~d~~G~~~w~~~~~~~~~~~~~~-~~~~l~~~~i~sspvi 192 (626)
...... ........... ......+|++++.+.++-++.+|..+.......+. .-+. ... ......+. .....+
T Consensus 213 ~~~~~~-~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~-~~~~-~~~~~~g~~p~g--~q~~a~ 287 (386)
T 3sjl_D 213 EITHTE-VFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAV-EALT-EAERADGWRPGG--WQQVAY 287 (386)
T ss_dssp EEEECC-CCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCE-ESSC-HHHHHTTEEECS--SSCEEE
T ss_pred EEeecc-eeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecce-eccc-cccccccccCCC--cceeeE
Confidence 110000 00000011111 11223678877778888899999753211111000 0000 000 00000000 012345
Q ss_pred EcCCCeEEEEcC----------CCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCCe--EEEEEcCCCEEEEEECCCCc
Q 006913 193 DQCEGSIYISNT----------QGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGY--LYVTIPVRALVLALDTSSGN 260 (626)
Q Consensus 193 D~~dG~LwIGT~----------~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG~--LwVGT~~gG~l~alD~~tG~ 260 (626)
++..+++|+... .+.|..+|.+++++.-+...+. ....++.+.||+ ||+.....+.+..+|..+++
T Consensus 288 ~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~--~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k 365 (386)
T 3sjl_D 288 HRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGH--EIDSINVSQDEKPLLYALSTGDKTLYIHDAESGE 365 (386)
T ss_dssp ETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE--EECEEEECSSSSCEEEEEETTTTEEEEEETTTCC
T ss_pred CCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCC--CcceEEECCCCCeEEEEEcCCCCeEEEEECCCCc
Confidence 544788999764 1459999999998876544322 234567777774 67665446789999999999
Q ss_pred EEEEEecC
Q 006913 261 ILWHKSVG 268 (626)
Q Consensus 261 ~~w~~~~~ 268 (626)
.+-.....
T Consensus 366 ~~~~i~~~ 373 (386)
T 3sjl_D 366 ELRSVNQL 373 (386)
T ss_dssp EEEEECCC
T ss_pred EEEEecCC
Confidence 87665444
No 201
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=95.77 E-value=0.95 Score=46.32 Aligned_cols=204 Identities=6% Similarity=-0.082 Sum_probs=106.5
Q ss_pred ccCeEEecCCeE-EEEE-CCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEc--CCeEEEEEcCCeEEEEe
Q 006913 80 GTAPVHGGTGEV-YIVA-ENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTS--SSSVYINVKGRALFAFM 155 (626)
Q Consensus 80 ~~sp~iD~dG~I-wVgT-~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~--dG~LwIgT~~gGL~a~d 155 (626)
+.++....++.+ ..++ ++.|..++......... ....+. .... .+..+.... +..|..++.++.|..+|
T Consensus 70 v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~-~~~~~~-----~h~~-~v~~~~~~~~~~~~l~s~~~dg~v~iwd 142 (416)
T 2pm9_A 70 FNDLDWSHNNKIIAGALDNGSLELYSTNEANNAIN-SMARFS-----NHSS-SVKTVKFNAKQDNVLASGGNNGEIFIWD 142 (416)
T ss_dssp EEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCC-EEEECC-----CSSS-CCCEEEECSSSTTBEEEECSSSCEEBCB
T ss_pred eEEEEECCCCCeEEEEccCCeEEEeeccccccccc-chhhcc-----CCcc-ceEEEEEcCCCCCEEEEEcCCCeEEEEE
Confidence 344555566664 4445 67888888765210000 111111 1112 233333333 44566677777788888
Q ss_pred CC-Cc------EEEEECCcccccccccccccCCCCCccccceEEEcC-CCeEEEEcCCCeEEEEeCCCCeEEEEEcCCC-
Q 006913 156 TH-GQ------LLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQC-EGSIYISNTQGELYSLSAHSPYFNWIQDLSS- 226 (626)
Q Consensus 156 ~~-G~------~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~-dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s- 226 (626)
.. ++ ...... . . .. .... ..++...+. +..|..++.++.|..+|.++++.........
T Consensus 143 ~~~~~~~~~~~~~~~~~----~---~----~~-~~~~-v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~ 209 (416)
T 2pm9_A 143 MNKCTESPSNYTPLTPG----Q---S----MS-SVDE-VISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSP 209 (416)
T ss_dssp TTTTSSCTTTCCCBCCC----C---S----CC-SSCC-CCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCC
T ss_pred CCCCccccccccccccc----c---c----cC-CCCC-eeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEecccc
Confidence 64 43 111100 0 0 00 0011 133444432 2456677788889999999987765543321
Q ss_pred ----CCcceeeeeecCC--eEEEEEcCCC---EEEEEECCCCc-EEEEEecCCCCCceeeEEEee-C-CeEEEEEcCCeE
Q 006913 227 ----FDKAFTLTPGNNG--YLYVTIPVRA---LVLALDTSSGN-ILWHKSVGPLGSAEYAPVVDS-N-GWISVGSLDGLL 294 (626)
Q Consensus 227 ----~~~v~sI~~D~dG--~LwVGT~~gG---~l~alD~~tG~-~~w~~~~~~l~~~~sspvvD~-d-G~IWVGT~~gGL 294 (626)
...+.++....+| .+..++ .++ .+..+|..++. ......... ...+.++...+ + ..|..|+.++.|
T Consensus 210 ~~~~~~~v~~~~~~~~~~~~l~~~~-~d~~~~~i~~~d~~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~~l~s~~~dg~v 287 (416)
T 2pm9_A 210 NSGIKQQLSVVEWHPKNSTRVATAT-GSDNDPSILIWDLRNANTPLQTLNQGH-QKGILSLDWCHQDEHLLLSSGRDNTV 287 (416)
T ss_dssp SSCCCCCEEEEEECSSCTTEEEEEE-CCSSSCCCCEEETTSTTSCSBCCCSCC-SSCEEEEEECSSCSSCEEEEESSSEE
T ss_pred ccccCCceEEEEECCCCCCEEEEEE-CCCCCceEEEEeCCCCCCCcEEeecCc-cCceeEEEeCCCCCCeEEEEeCCCCE
Confidence 2345666666665 455555 344 77778877653 322222011 12345566654 4 467778888999
Q ss_pred EEEcCC-CCEEE
Q 006913 295 YSFSPS-GVLNK 305 (626)
Q Consensus 295 y~~d~~-g~~~~ 305 (626)
..+|.. ++...
T Consensus 288 ~~wd~~~~~~~~ 299 (416)
T 2pm9_A 288 LLWNPESAEQLS 299 (416)
T ss_dssp EEECSSSCCEEE
T ss_pred EEeeCCCCccce
Confidence 999964 55444
No 202
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=95.75 E-value=2.4 Score=44.35 Aligned_cols=237 Identities=11% Similarity=0.004 Sum_probs=124.0
Q ss_pred eeEEeeCC-EEEEEe-----------CCcEEEEcC-CCCEEEEEeCC-CC----CCcccCeEEecCCe-EEEEE---CCe
Q 006913 41 KPLIGEDG-KIYACS-----------EKTLFAFES-NGTIAWSLDLD-FT----CNIGTAPVHGGTGE-VYIVA---ENR 98 (626)
Q Consensus 41 spvid~dG-~IwIgS-----------dggL~a~d~-~G~~~W~~~~~-~~----~~i~~sp~iD~dG~-IwVgT---~gg 98 (626)
.+.+..|| .+|++. ++.+..+|. +++..-.+..+ .. ......+.++.+|+ ||++. .+.
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~ 149 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPA 149 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCe
Confidence 66666666 688875 245889998 67665445443 10 01122456677766 77775 257
Q ss_pred EEEEECCCCccccceeEEE-ecCCCCCCCCCCeeEEEEEEcCCeEEEE-EcCCeEEEEeCCCcEEEEECCcccccccccc
Q 006913 99 VLKVDLLKIGTSESATQVF-YGTGSGKGGTGAIAGIAVSTSSSSVYIN-VKGRALFAFMTHGQLLWSAGPVLDQLGYRQG 176 (626)
Q Consensus 99 L~~id~~~~~~~~~~~~~~-~~~~~~~~~~~~~I~s~~~d~dG~LwIg-T~~gGL~a~d~~G~~~w~~~~~~~~~~~~~~ 176 (626)
|..+| .+++. .-. ... ...+ .....+.+.|+. ..++.+..++.+|+..+.... .. .
T Consensus 150 v~viD-~t~~~-----~~~~i~~-------~~~~--~~~~~~~~~~~~~~~dg~~~~vd~~g~~~~~~~~--~~-~---- 207 (373)
T 2mad_H 150 VGLVV-QGGSS-----DDQLLSS-------PTCY--HIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLV--GA-M---- 207 (373)
T ss_pred EEEEE-CCCCE-----EeEEcCC-------CceE--EEEeCCCceEEEEcCCCCEEEEECCCcEEEEEec--cc-c----
Confidence 99999 87632 111 110 0111 112223344443 334556677765555433200 00 0
Q ss_pred cccCCCCCccccceEEEcCCCeEEEEcCCCeEEEEeCCCCeEEEEEcC----C-----C--CCcceeeeeecC-CeEEEE
Q 006913 177 CTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDL----S-----S--FDKAFTLTPGNN-GYLYVT 244 (626)
Q Consensus 177 ~~~~l~~~~i~sspviD~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~----~-----s--~~~v~sI~~D~d-G~LwVG 244 (626)
. .....+...+.....++.+|+.+..+.++.+|..++........ . . ......+..+.| ++|||+
T Consensus 208 -~--~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~ 284 (373)
T 2mad_H 208 -L--TAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLL 284 (373)
T ss_pred -c--cCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEE
Confidence 0 00011111222222246666666777899999876533221111 0 0 011112344444 589997
Q ss_pred EcC---------CCEEEEEECCCCcEEEEEecCCCCCceeeEEEeeCCe--EEEEE-cCCeEEEEcCC-CCEEE
Q 006913 245 IPV---------RALVLALDTSSGNILWHKSVGPLGSAEYAPVVDSNGW--ISVGS-LDGLLYSFSPS-GVLNK 305 (626)
Q Consensus 245 T~~---------gG~l~alD~~tG~~~w~~~~~~l~~~~sspvvD~dG~--IWVGT-~~gGLy~~d~~-g~~~~ 305 (626)
... .+.+..+|..+++..-....+. ....+.+++||. +|++. .++.|..+|.. ++...
T Consensus 285 ~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~---~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~ 355 (373)
T 2mad_H 285 TSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGH---DVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQ 355 (373)
T ss_pred eccCCcccccCCCCeEEEEECCCCEEEEEEECCC---CcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEe
Confidence 531 2478899999998876555542 234567777776 55555 36789999975 55543
No 203
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=95.65 E-value=2 Score=42.69 Aligned_cols=197 Identities=5% Similarity=-0.113 Sum_probs=107.0
Q ss_pred ccCeEEecCCeEEEE-E-CCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEcCCeEEEEeCC
Q 006913 80 GTAPVHGGTGEVYIV-A-ENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTH 157 (626)
Q Consensus 80 ~~sp~iD~dG~IwVg-T-~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~~gGL~a~d~~ 157 (626)
+.++....+|.+.+. . ++.|...|..++.. ...+.. ....+........+..|..|+.++.|..+|..
T Consensus 16 V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~-----~~~~~~-----~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~ 85 (304)
T 2ynn_A 16 VKGIDFHPTEPWVLTTLYSGRVELWNYETQVE-----VRSIQV-----TETPVRAGKFIARKNWIIVGSDDFRIRVFNYN 85 (304)
T ss_dssp EEEEEECSSSSEEEEEETTSEEEEEETTTTEE-----EEEEEC-----CSSCEEEEEEEGGGTEEEEEETTSEEEEEETT
T ss_pred eEEEEECCCCCEEEEEcCCCcEEEEECCCCce-----eEEeec-----cCCcEEEEEEeCCCCEEEEECCCCEEEEEECC
Confidence 344555667765554 3 67888888877531 111111 11222233333445567778888889899975
Q ss_pred -CcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcCCCeEEEEeCCCCeEEEEEcCCCCCcceeeeee
Q 006913 158 -GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPG 236 (626)
Q Consensus 158 -G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D 236 (626)
|+.+..+.. + ... ..++...+.+..|..|+.++.|..+|.+++........+....+.++...
T Consensus 86 ~~~~~~~~~~------------h---~~~-v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~ 149 (304)
T 2ynn_A 86 TGEKVVDFEA------------H---PDY-IRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFN 149 (304)
T ss_dssp TCCEEEEEEC------------C---SSC-EEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEEC
T ss_pred CCcEEEEEeC------------C---CCc-EEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEEC
Confidence 776554310 0 011 23344544244567777888899999877633222111112345666655
Q ss_pred c-CCe-EEEEEcCCCEEEEEECCCCcEEEEEecCCCCCceeeEEEe--eC-CeEEEEEcCCeEEEEcCC-CCEE
Q 006913 237 N-NGY-LYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPVVD--SN-GWISVGSLDGLLYSFSPS-GVLN 304 (626)
Q Consensus 237 ~-dG~-LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~~~sspvvD--~d-G~IWVGT~~gGLy~~d~~-g~~~ 304 (626)
. ++. |..|. .++.+...|..++.......... .......... .+ ..|..|+.++.|..+|.. ++..
T Consensus 150 p~~~~~l~sgs-~D~~v~iwd~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~ 221 (304)
T 2ynn_A 150 PKDPSTFASGC-LDRTVKVWSLGQSTPNFTLTTGQ-ERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCV 221 (304)
T ss_dssp TTCTTEEEEEE-TTSEEEEEETTCSSCSEEEECCC-TTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEE
T ss_pred CCCCCEEEEEe-CCCeEEEEECCCCCccceeccCC-cCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccc
Confidence 4 444 55555 45788888876665443332221 1112222222 23 367788889999999975 4433
No 204
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=95.64 E-value=2.7 Score=44.18 Aligned_cols=211 Identities=13% Similarity=0.121 Sum_probs=110.6
Q ss_pred CcEEEEcCCCCEEEEEeCCCCCCcccCeEEecCCe-EEEEE-CC---eEEEEECCCCccccceeEEEecCCCCCCCCCCe
Q 006913 56 KTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGE-VYIVA-EN---RVLKVDLLKIGTSESATQVFYGTGSGKGGTGAI 130 (626)
Q Consensus 56 ggL~a~d~~G~~~W~~~~~~~~~i~~sp~iD~dG~-IwVgT-~g---gL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (626)
+.|+.+|.+|.....+... ...+.++....+|+ |..++ ++ .|+.+|..++.. ..... . ...
T Consensus 159 ~~i~i~d~~g~~~~~l~~~--~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~-----~~l~~------~-~~~ 224 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRS--PQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAV-----RQVAS------F-PRH 224 (415)
T ss_dssp EEEEEEETTSCSCEEEEEE--SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-----EEEEC------C-SSC
T ss_pred ceEEEEcCCCCCCEEEeCC--CCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcE-----EEeec------C-CCc
Confidence 3577777644211111111 12344566677776 44444 43 789999887631 11111 1 113
Q ss_pred eEEEEEEcCCe-EEEE-EcC--CeEEEEeCC-CcEEEEECCcccccccccccccCCCCCccccceEEEcCCCe-EEEEcC
Q 006913 131 AGIAVSTSSSS-VYIN-VKG--RALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGS-IYISNT 204 (626)
Q Consensus 131 I~s~~~d~dG~-LwIg-T~~--gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~-LwIGT~ 204 (626)
+..+....+|+ |.+. +.+ ..|+.+|.. ++.. .... .. . ....+...+ +|. |++++.
T Consensus 225 ~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~-~l~~------------~~---~-~~~~~~~sp-dg~~l~~~s~ 286 (415)
T 2hqs_A 225 NGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIR-QVTD------------GR---S-NNTEPTWFP-DSQNLAFTSD 286 (415)
T ss_dssp EEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-ECCC------------CS---S-CEEEEEECT-TSSEEEEEEC
T ss_pred ccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEE-eCcC------------CC---C-cccceEECC-CCCEEEEEEC
Confidence 44444455665 5533 332 348889975 5542 2100 00 0 123345554 444 666654
Q ss_pred CC---eEEEEeCCCCeEEEEEcCCCCCcceeeeeecCCe-EEEEEcC--CCEEEEEECCCCcEEEEEecCCCCCceeeEE
Q 006913 205 QG---ELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGY-LYVTIPV--RALVLALDTSSGNILWHKSVGPLGSAEYAPV 278 (626)
Q Consensus 205 ~G---gL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG~-LwVGT~~--gG~l~alD~~tG~~~w~~~~~~l~~~~sspv 278 (626)
.+ .|+.+|.++++...... ....+..+....||+ |+++... ...++.+|..+++..... .. .....+.
T Consensus 287 ~~g~~~i~~~d~~~~~~~~l~~--~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~-~~---~~~~~~~ 360 (415)
T 2hqs_A 287 QAGRPQVYKVNINGGAPQRITW--EGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLS-ST---FLDETPS 360 (415)
T ss_dssp TTSSCEEEEEETTSSCCEECCC--SSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECC-CS---SSCEEEE
T ss_pred CCCCcEEEEEECCCCCEEEEec--CCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEec-CC---CCcCCeE
Confidence 33 68999998876533211 112344555666775 5555433 247888998888764211 11 1345577
Q ss_pred EeeCCe-EEEEEcCC---eEEEEcCCCCEE
Q 006913 279 VDSNGW-ISVGSLDG---LLYSFSPSGVLN 304 (626)
Q Consensus 279 vD~dG~-IWVGT~~g---GLy~~d~~g~~~ 304 (626)
..++|. |++++.++ .|+.+|.+++..
T Consensus 361 ~spdg~~l~~~s~~~~~~~l~~~d~~g~~~ 390 (415)
T 2hqs_A 361 LAPNGTMVIYSSSQGMGSVLNLVSTDGRFK 390 (415)
T ss_dssp ECTTSSEEEEEEEETTEEEEEEEETTSCCE
T ss_pred EcCCCCEEEEEEcCCCccEEEEEECCCCcE
Confidence 777775 66666555 588888765443
No 205
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=95.59 E-value=2 Score=42.37 Aligned_cols=226 Identities=11% Similarity=0.018 Sum_probs=113.4
Q ss_pred eEEeeCCEEEE-Ee-CCcEEEEcC-CCCEEEEEeCCCCCCcccCeEEecCCe-EEEEE-CCeEEEEECCCCccccceeEE
Q 006913 42 PLIGEDGKIYA-CS-EKTLFAFES-NGTIAWSLDLDFTCNIGTAPVHGGTGE-VYIVA-ENRVLKVDLLKIGTSESATQV 116 (626)
Q Consensus 42 pvid~dG~IwI-gS-dggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~dG~-IwVgT-~ggL~~id~~~~~~~~~~~~~ 116 (626)
.....+|.+.+ ++ ++.+..++. .+.......... ..........++. +..++ ++.+..+|..... ..
T Consensus 92 ~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~------~~ 163 (340)
T 4aow_A 92 VVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHT--KDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVC------KY 163 (340)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCS--SCEEEEEECTTSSCEEEEETTSCEEEECTTSCE------EE
T ss_pred EEECCCCCEEEEEcccccceEEeecccceeeeecCCC--CceeEEEEeecCccceeecCCCeEEEEEeCCCc------eE
Confidence 33445565444 44 455666666 333332222211 1122223334444 44455 6777777765531 11
Q ss_pred EecCCCCCCCCCCeeEEEEEE--cCCeE-EEEEcCCeEEEEeCC-CcEEEEECCcccccccccccccCCCCCccccceEE
Q 006913 117 FYGTGSGKGGTGAIAGIAVST--SSSSV-YINVKGRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVI 192 (626)
Q Consensus 117 ~~~~~~~~~~~~~~I~s~~~d--~dG~L-wIgT~~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspvi 192 (626)
..... .. ...+...... ..+.+ ..++.++-+..+|.. ++....+.. + ...+ .++..
T Consensus 164 ~~~~~---~~-~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~------------h---~~~v-~~~~~ 223 (340)
T 4aow_A 164 TVQDE---SH-SEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIG------------H---TGYL-NTVTV 223 (340)
T ss_dssp EECSS---SC-SSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECC------------C---SSCE-EEEEE
T ss_pred EEEec---cc-cCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecC------------C---CCcE-EEEEE
Confidence 11111 11 1223322222 22333 345566778888875 655443310 0 0112 33445
Q ss_pred EcCCCeEEEEcCCCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCCeEEEEEcCCCEEEEEECCCCcEEEEEecCC---
Q 006913 193 DQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGP--- 269 (626)
Q Consensus 193 D~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~--- 269 (626)
.+.+..|..|+.++.|..+|.++++........ ..+..+....++.+.++.. ++.+..+|..++..........
T Consensus 224 s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~ 300 (340)
T 4aow_A 224 SPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG--DIINALCFSPNRYWLCAAT-GPSIKIWDLEGKIIVDELKQEVIST 300 (340)
T ss_dssp CTTSSEEEEEETTCEEEEEETTTTEEEEEEECS--SCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCC----
T ss_pred CCCCCEEEEEeCCCeEEEEEeccCceeeeecCC--ceEEeeecCCCCceeeccC-CCEEEEEECCCCeEEEeccccceee
Confidence 542345667778889999999988766543322 2345555666777777774 5688888987777665442211
Q ss_pred ----CCCceeeEEEeeCCe-EEEEEcCCeEEEEc
Q 006913 270 ----LGSAEYAPVVDSNGW-ISVGSLDGLLYSFS 298 (626)
Q Consensus 270 ----l~~~~sspvvD~dG~-IWVGT~~gGLy~~d 298 (626)
....+.++...++|. |..|+.++.|..++
T Consensus 301 ~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~ 334 (340)
T 4aow_A 301 SSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQ 334 (340)
T ss_dssp ---CCCCCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred eccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEe
Confidence 011234455555553 45556666666665
No 206
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=95.59 E-value=2.6 Score=43.62 Aligned_cols=201 Identities=13% Similarity=0.021 Sum_probs=101.8
Q ss_pred eeEEeeCCEEEE-Ee-CCcEEEEcC-CCCEEEEEeCCCCCCcccCeEEecCCeEEE-EE-CCeEEEEECCCCccccceeE
Q 006913 41 KPLIGEDGKIYA-CS-EKTLFAFES-NGTIAWSLDLDFTCNIGTAPVHGGTGEVYI-VA-ENRVLKVDLLKIGTSESATQ 115 (626)
Q Consensus 41 spvid~dG~IwI-gS-dggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~dG~IwV-gT-~ggL~~id~~~~~~~~~~~~ 115 (626)
+.....+|...+ |+ ++.+..+|. +++....+.. .. ..+.++....+|...+ ++ ++.|...|..++.. .
T Consensus 128 ~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~-h~-~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~-----~ 200 (393)
T 1erj_A 128 SVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQG-HE-QDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQC-----S 200 (393)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-CS-SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE-----E
T ss_pred EEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcc-CC-CCEEEEEEcCCCCEEEEecCCCcEEEEECCCCee-----E
Confidence 444445665444 45 567888887 6655433321 11 2234555556666444 44 77888889877531 2
Q ss_pred EEecCCCCCCCCCCeeEEEEEEc-CC-eEEEEEcCCeEEEEeCC-CcEEEEECCcccccccccccccCCCCCccccceEE
Q 006913 116 VFYGTGSGKGGTGAIAGIAVSTS-SS-SVYINVKGRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVI 192 (626)
Q Consensus 116 ~~~~~~~~~~~~~~~I~s~~~d~-dG-~LwIgT~~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspvi 192 (626)
..+.. .. .+....... ++ .|..|+.++.+..+|.. ++......... .. ... .... ..++..
T Consensus 201 ~~~~~------~~-~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~-----~~--~~~-h~~~-v~~v~~ 264 (393)
T 1erj_A 201 LTLSI------ED-GVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSEN-----ES--GTG-HKDS-VYSVVF 264 (393)
T ss_dssp EEEEC------SS-CEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC-------------CC-CSSC-EEEEEE
T ss_pred EEEEc------CC-CcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccc-----cC--CCC-CCCC-EEEEEE
Confidence 22211 11 223333322 44 46667778888899975 66554331100 00 000 0111 233455
Q ss_pred EcCCCeEEEEcCCCeEEEEeCCCCeEEEEE----------c-CCCCCcceeeeeecCCe-EEEEEcCCCEEEEEECCCCc
Q 006913 193 DQCEGSIYISNTQGELYSLSAHSPYFNWIQ----------D-LSSFDKAFTLTPGNNGY-LYVTIPVRALVLALDTSSGN 260 (626)
Q Consensus 193 D~~dG~LwIGT~~GgL~~ld~~tg~~~w~~----------~-~~s~~~v~sI~~D~dG~-LwVGT~~gG~l~alD~~tG~ 260 (626)
.+.+..|..|+.++.|..+|.++....... . .+....+.+++...+|. |..|+ .++.+...|..+++
T Consensus 265 ~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs-~D~~v~iwd~~~~~ 343 (393)
T 1erj_A 265 TRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGS-KDRGVLFWDKKSGN 343 (393)
T ss_dssp CTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEE-TTSEEEEEETTTCC
T ss_pred CCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEe-CCCeEEEEECCCCe
Confidence 542445777777888988888654321110 0 01112355566655664 44555 45788889988888
Q ss_pred EEEEE
Q 006913 261 ILWHK 265 (626)
Q Consensus 261 ~~w~~ 265 (626)
.....
T Consensus 344 ~~~~l 348 (393)
T 1erj_A 344 PLLML 348 (393)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 76543
No 207
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=95.43 E-value=1.4 Score=43.38 Aligned_cols=112 Identities=10% Similarity=0.049 Sum_probs=64.1
Q ss_pred eEEEcCCCeEEEEcCC-CeEEEEeCC--CCeEEEEEcCCCCCcceeeeeecCCe-EEEEEcCCCEEEEEECCCCc---EE
Q 006913 190 PVIDQCEGSIYISNTQ-GELYSLSAH--SPYFNWIQDLSSFDKAFTLTPGNNGY-LYVTIPVRALVLALDTSSGN---IL 262 (626)
Q Consensus 190 pviD~~dG~LwIGT~~-GgL~~ld~~--tg~~~w~~~~~s~~~v~sI~~D~dG~-LwVGT~~gG~l~alD~~tG~---~~ 262 (626)
+..++.+..||++..+ +.|..++.+ ++...-.........+..++.+.+|+ ||++...++.+..+|..+|. ..
T Consensus 43 ~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~ 122 (343)
T 1ri6_A 43 MVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVV 122 (343)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEE
T ss_pred EEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCcccccc
Confidence 4555423448888775 778876665 66544322211112345566677775 88877556677777753333 22
Q ss_pred EEEecCCCCCceeeEEEeeCC-eEEEEE-cCCeEEEEcCC--CCEE
Q 006913 263 WHKSVGPLGSAEYAPVVDSNG-WISVGS-LDGLLYSFSPS--GVLN 304 (626)
Q Consensus 263 w~~~~~~l~~~~sspvvD~dG-~IWVGT-~~gGLy~~d~~--g~~~ 304 (626)
...... .....+..+++| .||++. .++.|+.++.. ++..
T Consensus 123 ~~~~~~---~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~ 165 (343)
T 1ri6_A 123 DVVEGL---DGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLV 165 (343)
T ss_dssp EEECCC---TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEE
T ss_pred ccccCC---CCceEEEECCCCCEEEEecCCCCEEEEEEecCCCcee
Confidence 222211 123446677676 588887 67888888853 5443
No 208
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=95.17 E-value=2.8 Score=41.55 Aligned_cols=264 Identities=8% Similarity=-0.077 Sum_probs=129.2
Q ss_pred CCEEEEEe-CCcEEEEcC-CCCEEEEEe---CCCCCCcccCeEEecC----CeE-EEEE-CCeEEEEECCCCccccceeE
Q 006913 47 DGKIYACS-EKTLFAFES-NGTIAWSLD---LDFTCNIGTAPVHGGT----GEV-YIVA-ENRVLKVDLLKIGTSESATQ 115 (626)
Q Consensus 47 dG~IwIgS-dggL~a~d~-~G~~~W~~~---~~~~~~i~~sp~iD~d----G~I-wVgT-~ggL~~id~~~~~~~~~~~~ 115 (626)
+..++++. ++.+..++. ++.....+. .......+.++....+ |.+ ..+. ++.|..+|..++.. .
T Consensus 34 ~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~-----~ 108 (366)
T 3k26_A 34 DPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQC-----I 108 (366)
T ss_dssp SCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCE-----E
T ss_pred CceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceE-----e
Confidence 34466654 667788886 454332221 1100112333444444 444 4445 67888889876531 2
Q ss_pred EEecCCCCCCCCCCeeEEEEEE--cCCeEEEEEcCCeEEEEeCC-CcEEEEECCcccccccccccccCCCCCccccceEE
Q 006913 116 VFYGTGSGKGGTGAIAGIAVST--SSSSVYINVKGRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVI 192 (626)
Q Consensus 116 ~~~~~~~~~~~~~~~I~s~~~d--~dG~LwIgT~~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspvi 192 (626)
..+.. . ...+..+... .+..|..++.++.|..+|.. ++....+.. + . .. ... ..++..
T Consensus 109 ~~~~~-----~-~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~----~---~--~~---~~~-v~~~~~ 169 (366)
T 3k26_A 109 KHYVG-----H-GNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGG----V---E--GH---RDE-VLSADY 169 (366)
T ss_dssp EEEES-----C-CSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECS----T---T--SC---SSC-EEEEEE
T ss_pred eeecC-----C-CCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecc----c---c--cc---cCc-eeEEEE
Confidence 22211 1 1234444333 34456777778889999975 665544310 0 0 00 011 233444
Q ss_pred EcCCCeEEEEcCCCeEEEEeCCCCeEEEEEc---------------------------CCCCCcceeeeeecCCeEEEEE
Q 006913 193 DQCEGSIYISNTQGELYSLSAHSPYFNWIQD---------------------------LSSFDKAFTLTPGNNGYLYVTI 245 (626)
Q Consensus 193 D~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~---------------------------~~s~~~v~sI~~D~dG~LwVGT 245 (626)
.+.+..|..+..++.|..+|.++++...... ......+.++... ...|..++
T Consensus 170 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~ 248 (366)
T 3k26_A 170 DLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL-GDLILSKS 248 (366)
T ss_dssp CTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE-TTEEEEEC
T ss_pred CCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc-CCEEEEEe
Confidence 4424567778788889999988754321000 0011224445444 34555555
Q ss_pred cCCCEEEEEECCCCcE--------------EEEEecCCCCCceeeEEEeeC--C-eEEEEEcCCeEEEEcCC-CC----E
Q 006913 246 PVRALVLALDTSSGNI--------------LWHKSVGPLGSAEYAPVVDSN--G-WISVGSLDGLLYSFSPS-GV----L 303 (626)
Q Consensus 246 ~~gG~l~alD~~tG~~--------------~w~~~~~~l~~~~sspvvD~d--G-~IWVGT~~gGLy~~d~~-g~----~ 303 (626)
.++.+..+|..++.. ........ ..+..+...++ | .|..|+.++.|+.+|.. ++ .
T Consensus 249 -~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 325 (366)
T 3k26_A 249 -CENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQ--CDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAK 325 (366)
T ss_dssp -SSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSS--CCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCE
T ss_pred -cCCEEEEEeCCCccccccccccCCcchheeccccccC--CcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCcccc
Confidence 456777777666532 22221110 11122223333 4 56778888889999865 32 1
Q ss_pred EEEeeccCCCCccccCceEEEEEEecCCcEEEEEeeecCeeE
Q 006913 304 NKFSKSDTSDSVIQSSPYWFHLLGPSIGLKAILCLMVVGQFS 345 (626)
Q Consensus 304 ~~~~~~~~~~~~ilssp~V~~Il~DsdG~IwI~T~t~~Ggl~ 345 (626)
..... .. .....|.++....+|.+. .+++..|.+.
T Consensus 326 ~~~~~---~~---~~~~~v~~~~~s~~~~~l-~s~~~dg~i~ 360 (366)
T 3k26_A 326 CTTLT---HH---KCGAAIRQTSFSRDSSIL-IAVCDDASIW 360 (366)
T ss_dssp EEEEC---CT---TCCSCEEEEEECTTSSEE-EEEETTSEEE
T ss_pred ceEEc---cc---ccCCceEEEEeCCCCCeE-EEEeCCCEEE
Confidence 11111 10 012345666666677654 4444444443
No 209
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=95.15 E-value=3.1 Score=41.93 Aligned_cols=189 Identities=9% Similarity=-0.066 Sum_probs=96.0
Q ss_pred eEEeeCCEEEE-Ee-CCcEEEEcC-CCCEEEEEeCCCCCCcccCeEEecCCeEEE-EE-CCeEEEEECCCCccccceeEE
Q 006913 42 PLIGEDGKIYA-CS-EKTLFAFES-NGTIAWSLDLDFTCNIGTAPVHGGTGEVYI-VA-ENRVLKVDLLKIGTSESATQV 116 (626)
Q Consensus 42 pvid~dG~IwI-gS-dggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~dG~IwV-gT-~ggL~~id~~~~~~~~~~~~~ 116 (626)
.....++.+.+ |+ ++.+..+|. +++....+.... ..+.++....+|+..+ +. ++.|..+|..... ..
T Consensus 82 ~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~--~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~------~~ 153 (343)
T 2xzm_R 82 LALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQ--SEVYSVAFSPDNRQILSAGAEREIKLWNILGEC------KF 153 (343)
T ss_dssp EEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCC--SCEEEEEECSSTTEEEEEETTSCEEEEESSSCE------EE
T ss_pred EEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCC--CcEEEEEECCCCCEEEEEcCCCEEEEEeccCCc------ee
Confidence 33434555444 45 567788887 777654443211 2344555666776444 44 7788888876431 11
Q ss_pred EecCCCCCCCCCCeeEEEEEEcC-----------CeEEEEEcCCeEEEEeCCCcEEEEECCcccccccccccccCCCCCc
Q 006913 117 FYGTGSGKGGTGAIAGIAVSTSS-----------SSVYINVKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCY 185 (626)
Q Consensus 117 ~~~~~~~~~~~~~~I~s~~~d~d-----------G~LwIgT~~gGL~a~d~~G~~~w~~~~~~~~~~~~~~~~~~l~~~~ 185 (626)
..... ... ...+..+....+ ..+..++.++.|..+|.+++....+.. +. ..
T Consensus 154 ~~~~~--~~~-~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~------------h~---~~ 215 (343)
T 2xzm_R 154 SSAEK--ENH-SDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQIRYTFKA------------HE---SN 215 (343)
T ss_dssp ECCTT--TSC-SSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTEEEEEEEC------------CS---SC
T ss_pred eeecc--cCC-CceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCCceeEEEcC------------cc---cc
Confidence 11100 011 112333222222 346667777888888866655433200 00 11
Q ss_pred cccceEEEcCCCeEEEEcCCCeEEEEeCCC-CeEEEEEcCCCCCcceeeeeecCCeEEEEEcCCCEEEEEECCCCc
Q 006913 186 FTSVPVIDQCEGSIYISNTQGELYSLSAHS-PYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGN 260 (626)
Q Consensus 186 i~sspviD~~dG~LwIGT~~GgL~~ld~~t-g~~~w~~~~~s~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~tG~ 260 (626)
..++...+.+..|..|+.++.|..+|... +........ ...+.+++...++.+.++..+ +.+..+|..++.
T Consensus 216 -v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~~--~~~v~~v~~sp~~~~la~~~d-~~v~iw~~~~~~ 287 (343)
T 2xzm_R 216 -VNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFDA--GSTINQIAFNPKLQWVAVGTD-QGVKIFNLMTQS 287 (343)
T ss_dssp -EEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEEC--SSCEEEEEECSSSCEEEEEES-SCEEEEESSSCC
T ss_pred -ceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceeecC--CCcEEEEEECCCCCEEEEECC-CCEEEEEeCCCC
Confidence 13344554234566777788899998843 222211111 123556666667766555433 456667766554
No 210
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=95.13 E-value=3 Score=41.61 Aligned_cols=194 Identities=7% Similarity=-0.057 Sum_probs=97.9
Q ss_pred ccCeEEecCCeEEE-EE-CCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEE-Ec--CCeEEEEEcCCeEEEE
Q 006913 80 GTAPVHGGTGEVYI-VA-ENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVS-TS--SSSVYINVKGRALFAF 154 (626)
Q Consensus 80 ~~sp~iD~dG~IwV-gT-~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~-d~--dG~LwIgT~~gGL~a~ 154 (626)
+.++....+|.+.+ ++ ++.|..++...... .....+. .... .|..+.. .. +..|..++.++-|..+
T Consensus 14 v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~---~~~~~~~-----~h~~-~v~~~~~~~~~~~~~l~s~~~dg~v~iw 84 (379)
T 3jrp_A 14 IHDAVLDYYGKRLATCSSDKTIKIFEVEGETH---KLIDTLT-----GHEG-PVWRVDWAHPKFGTILASCSYDGKVLIW 84 (379)
T ss_dssp EEEEEECSSSSEEEEEETTSCEEEEEEETTEE---EEEEEEC-----CCSS-CEEEEEECCGGGCSEEEEEETTSCEEEE
T ss_pred EEEEEEcCCCCEEEEEECCCcEEEEecCCCcc---eeeeEec-----CCCC-cEEEEEeCCCCCCCEEEEeccCCEEEEE
Confidence 33445556666444 44 66677777653210 0111111 1112 3333332 22 4567777877888888
Q ss_pred eCC-Cc--EEEEECCcccccccccccccCCCCCccccceEEEcC--CCeEEEEcCCCeEEEEeCCCCeE--EEEEcCCCC
Q 006913 155 MTH-GQ--LLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQC--EGSIYISNTQGELYSLSAHSPYF--NWIQDLSSF 227 (626)
Q Consensus 155 d~~-G~--~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~--dG~LwIGT~~GgL~~ld~~tg~~--~w~~~~~s~ 227 (626)
|.. ++ ....... + ... ..++...+. +..|..++.++.|..+|.+++.. ..... ...
T Consensus 85 d~~~~~~~~~~~~~~------------~---~~~-v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~-~~~ 147 (379)
T 3jrp_A 85 KEENGRWSQIAVHAV------------H---SAS-VNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIID-AHA 147 (379)
T ss_dssp EEETTEEEEEEEECC------------C---SSC-EEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEE-CCT
T ss_pred EcCCCceeEeeeecC------------C---Ccc-eEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEec-CCC
Confidence 864 54 2222100 0 011 133444432 34577888889999999887632 11111 111
Q ss_pred Ccceeeeeec-------------CC-eEEEEEcCCCEEEEEECCCCcEEEEE--ecCCCCCceeeEEEeeC---C-eEEE
Q 006913 228 DKAFTLTPGN-------------NG-YLYVTIPVRALVLALDTSSGNILWHK--SVGPLGSAEYAPVVDSN---G-WISV 287 (626)
Q Consensus 228 ~~v~sI~~D~-------------dG-~LwVGT~~gG~l~alD~~tG~~~w~~--~~~~l~~~~sspvvD~d---G-~IWV 287 (626)
..+.++.... ++ .+.+++ .++.+..+|..++...+.. ........+.++...++ + .|..
T Consensus 148 ~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s 226 (379)
T 3jrp_A 148 IGVNSASWAPATIEEDGEHNGTKESRKFVTGG-ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLAS 226 (379)
T ss_dssp TCEEEEEECCCC----------CTTCEEEEEE-TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEE
T ss_pred CceEEEEEcCccccccccccCCCCCCEEEEEe-CCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEE
Confidence 2344444443 35 455555 4567777776555433221 11111123555677766 4 4666
Q ss_pred EEcCCeEEEEcCC
Q 006913 288 GSLDGLLYSFSPS 300 (626)
Q Consensus 288 GT~~gGLy~~d~~ 300 (626)
|+.++.|..++..
T Consensus 227 ~~~dg~i~iwd~~ 239 (379)
T 3jrp_A 227 VSQDRTCIIWTQD 239 (379)
T ss_dssp EETTSCEEEEEES
T ss_pred EeCCCEEEEEeCC
Confidence 7778888888854
No 211
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=95.08 E-value=4.2 Score=43.06 Aligned_cols=72 Identities=11% Similarity=0.087 Sum_probs=50.1
Q ss_pred ceeeeeEEeeCCEEEEEeCC-----------------cEEEEcC-CC--CEEEEEeCCCC----CCcccCeEEe-c----
Q 006913 37 FRLSKPLIGEDGKIYACSEK-----------------TLFAFES-NG--TIAWSLDLDFT----CNIGTAPVHG-G---- 87 (626)
Q Consensus 37 ~~~Sspvid~dG~IwIgSdg-----------------gL~a~d~-~G--~~~W~~~~~~~----~~i~~sp~iD-~---- 87 (626)
...-++.+|..|+||+-..| .|+++|. ++ +++..+.++.. ......+.+| .
T Consensus 87 vsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~ 166 (381)
T 3q6k_A 87 TSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKG 166 (381)
T ss_dssp SCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTT
T ss_pred EEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCC
Confidence 33445678889999995311 3889998 77 77766666421 1235567777 2
Q ss_pred ---CCeEEEEE--CCeEEEEECCCCc
Q 006913 88 ---TGEVYIVA--ENRVLKVDLLKIG 108 (626)
Q Consensus 88 ---dG~IwVgT--~ggL~~id~~~~~ 108 (626)
++.+||+. ..||.++|..+++
T Consensus 167 ~c~~~~aYItD~~~~gLIVydl~~~~ 192 (381)
T 3q6k_A 167 DCSETFVYITNFLRGALFIYDHKKQD 192 (381)
T ss_dssp TSCSEEEEEEETTTTEEEEEETTTTE
T ss_pred CCCccEEEEEcCCCCcEEEEECCCCc
Confidence 46689886 6899999998874
No 212
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=94.91 E-value=0.79 Score=48.01 Aligned_cols=112 Identities=7% Similarity=0.097 Sum_probs=68.2
Q ss_pred eEEEcCCCeEEEEcC-CCeEEEEeCCCCeEEEEEcCC-----CCCcceeeeeec----CCeEEEEEc--CCCEEEEEECC
Q 006913 190 PVIDQCEGSIYISNT-QGELYSLSAHSPYFNWIQDLS-----SFDKAFTLTPGN----NGYLYVTIP--VRALVLALDTS 257 (626)
Q Consensus 190 pviD~~dG~LwIGT~-~GgL~~ld~~tg~~~w~~~~~-----s~~~v~sI~~D~----dG~LwVGT~--~gG~l~alD~~ 257 (626)
++... +|.|||+.. .|.|++++.+++...-..... .......++.+. +|.||+... ....+..+...
T Consensus 37 ia~~p-dG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~ 115 (347)
T 3das_A 37 LAPLP-GGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRMLYD 115 (347)
T ss_dssp EEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEEEBC
T ss_pred EEEcC-CCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEEEeC
Confidence 55665 889999988 788999988766654332221 122345566653 689999631 23467777543
Q ss_pred CC----------cEEEEEecCCCCCceeeEEEeeCCeEEEEEc--------------CCeEEEEcCCCC
Q 006913 258 SG----------NILWHKSVGPLGSAEYAPVVDSNGWISVGSL--------------DGLLYSFSPSGV 302 (626)
Q Consensus 258 tG----------~~~w~~~~~~l~~~~sspvvD~dG~IWVGT~--------------~gGLy~~d~~g~ 302 (626)
.+ +.++........+....++++++|.|||++. .+.|++++++|+
T Consensus 116 ~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ 184 (347)
T 3das_A 116 EKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGE 184 (347)
T ss_dssp TTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSS
T ss_pred CCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCC
Confidence 31 1222211111112345688899999999863 478888888765
No 213
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=94.90 E-value=6 Score=43.95 Aligned_cols=193 Identities=9% Similarity=0.010 Sum_probs=109.0
Q ss_pred ecCCeEEEEE--CCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEcCC-eEEEEEcCCeEEEEeC---CCc
Q 006913 86 GGTGEVYIVA--ENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSS-SVYINVKGRALFAFMT---HGQ 159 (626)
Q Consensus 86 D~dG~IwVgT--~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG-~LwIgT~~gGL~a~d~---~G~ 159 (626)
|..+.+|+.. ++.|..+|..+++. ...+.. +.....+....+| .+|+++.++.|..+|. +++
T Consensus 164 d~~~~~~V~~~~~~~V~viD~~t~~v-----~~~i~~-------g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~ 231 (567)
T 1qks_A 164 DLENLFSVTLRDAGQIALIDGSTYEI-----KTVLDT-------GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPT 231 (567)
T ss_dssp CGGGEEEEEETTTTEEEEEETTTCCE-----EEEEEC-------SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCC
T ss_pred CCCceEEEEeCCCCeEEEEECCCCeE-----EEEEeC-------CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCc
Confidence 4445677765 58899999988642 222211 1122333444454 6899988889999997 466
Q ss_pred EEEEECCcccccccccccccCCCCCccccceEEE----cCCCeEEEEcC-CCeEEEEeCCCCeEEEEEcCCC--C-----
Q 006913 160 LLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVID----QCEGSIYISNT-QGELYSLSAHSPYFNWIQDLSS--F----- 227 (626)
Q Consensus 160 ~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD----~~dG~LwIGT~-~GgL~~ld~~tg~~~w~~~~~s--~----- 227 (626)
.+..... + .. ...+.+. ..+..+|++++ .+.+..+|..+.+......... .
T Consensus 232 ~v~~i~~-----G-----------~~-P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~ 294 (567)
T 1qks_A 232 TVAEIKI-----G-----------SE-ARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEY 294 (567)
T ss_dssp EEEEEEC-----C-----------SE-EEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCE
T ss_pred EeEEEec-----C-----------CC-CceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccc
Confidence 6544300 0 00 1223444 22557999876 4788999999988876654321 1
Q ss_pred ---CcceeeeeecCC-eEEEEEcCCCEEEEEECCCCcEEEEEecCCCCCceeeEEEeeCCe-EEEEE-cCCeEEEEcCC-
Q 006913 228 ---DKAFTLTPGNNG-YLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPVVDSNGW-ISVGS-LDGLLYSFSPS- 300 (626)
Q Consensus 228 ---~~v~sI~~D~dG-~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~~~sspvvD~dG~-IWVGT-~~gGLy~~d~~- 300 (626)
..+..++...++ .+++.....|.+..+|..+.+..-...+.. +........+++|+ +|++. ..+.|..+|..
T Consensus 295 ~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~-~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t 373 (567)
T 1qks_A 295 HPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISA-ERFLHDGGLDGSHRYFITAANARNKLVVIDTKE 373 (567)
T ss_dssp ESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEEC-CSSEEEEEECTTSCEEEEEEGGGTEEEEEETTT
T ss_pred cCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeec-cccccCceECCCCCEEEEEeCCCCeEEEEECCC
Confidence 123344444444 344444445677777766544322111111 12334456777775 56655 35789999975
Q ss_pred CCEEEEee
Q 006913 301 GVLNKFSK 308 (626)
Q Consensus 301 g~~~~~~~ 308 (626)
+++.....
T Consensus 374 ~kl~~~i~ 381 (567)
T 1qks_A 374 GKLVAIED 381 (567)
T ss_dssp TEEEEEEE
T ss_pred CcEEEEEe
Confidence 66555443
No 214
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=94.79 E-value=4.7 Score=42.17 Aligned_cols=228 Identities=10% Similarity=-0.053 Sum_probs=107.3
Q ss_pred CC-EEEEEe-CCcEEEEcCCCCEEEEEeCCCC-CCcccCeEEecCCeEEE-EE-CCeEEEEECCCCccccceeEEEecCC
Q 006913 47 DG-KIYACS-EKTLFAFESNGTIAWSLDLDFT-CNIGTAPVHGGTGEVYI-VA-ENRVLKVDLLKIGTSESATQVFYGTG 121 (626)
Q Consensus 47 dG-~IwIgS-dggL~a~d~~G~~~W~~~~~~~-~~i~~sp~iD~dG~IwV-gT-~ggL~~id~~~~~~~~~~~~~~~~~~ 121 (626)
++ .|+.|+ ++.+..+|..+.....+..... .....++....++.+.+ |+ ++.|..+|..+... ..+
T Consensus 176 ~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~------~~~--- 246 (435)
T 4e54_B 176 NTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKEL------WNL--- 246 (435)
T ss_dssp CTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCBC------CCS---
T ss_pred CCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCccee------EEE---
Confidence 44 454455 5667788874443322222111 11234555667777555 44 67888888765321 000
Q ss_pred CCCCCCCCeeEEEEEEcCC--eEEEEEcCCeEEEEeCC-CcEEEEECCcccccccccccccCCCCCccccceEEEcCCCe
Q 006913 122 SGKGGTGAIAGIAVSTSSS--SVYINVKGRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGS 198 (626)
Q Consensus 122 ~~~~~~~~~I~s~~~d~dG--~LwIgT~~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~ 198 (626)
..... .|..+....++ .+..++.++-|..+|.. ++..-.. .... .+ ...+ .++...+.+..
T Consensus 247 --~~h~~-~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~-------~~~~--~h---~~~v-~~~~~spdg~~ 310 (435)
T 4e54_B 247 --RMHKK-KVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASF-------LYSL--PH---RHPV-NAACFSPDGAR 310 (435)
T ss_dssp --BCCSS-CEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCC-------SBCC--BC---SSCE-EECCBCTTSSE
T ss_pred --ecccc-eEEeeeecCCCceEEEEecCcceeeEEecccccccceE-------EEee--ec---cccc-cceeECCCCCe
Confidence 11112 34444333333 34456666667777753 3211000 0000 00 0111 22233332456
Q ss_pred EEEEcCCCeEEEEeCCCCeEEEEEcCC--C-CC--cceeeeeecCC-eEEEEE-----------cCCCEEEEEECCCCcE
Q 006913 199 IYISNTQGELYSLSAHSPYFNWIQDLS--S-FD--KAFTLTPGNNG-YLYVTI-----------PVRALVLALDTSSGNI 261 (626)
Q Consensus 199 LwIGT~~GgL~~ld~~tg~~~w~~~~~--s-~~--~v~sI~~D~dG-~LwVGT-----------~~gG~l~alD~~tG~~ 261 (626)
|..|+.++.|..+|..++......... . .. .........++ .+.++. ..+..+..+|..+|..
T Consensus 311 l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~ 390 (435)
T 4e54_B 311 LLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKM 390 (435)
T ss_dssp EEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCE
T ss_pred eEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcE
Confidence 777778888999998877654332110 0 00 01111111122 222221 1223566778888887
Q ss_pred EEEEecCCCCCceeeE-EEeeCCeEEEEEcCCeEEEEcCC
Q 006913 262 LWHKSVGPLGSAEYAP-VVDSNGWISVGSLDGLLYSFSPS 300 (626)
Q Consensus 262 ~w~~~~~~l~~~~ssp-vvD~dG~IWVGT~~gGLy~~d~~ 300 (626)
+.....+. ...+.++ ...++|.+.++..++.|..++..
T Consensus 391 ~~~l~~~~-~~~v~s~~~fspdg~~lasg~d~~i~iW~~~ 429 (435)
T 4e54_B 391 MCQLYDPE-SSGISSLNEFNPMGDTLASAMGYHILIWSQQ 429 (435)
T ss_dssp EEEECCSS-CCCCCCEEEECTTSSCEEEECSSEEEECCCC
T ss_pred EEEEeCCC-CCcEEEEEEECCCCCEEEEEcCCcEEEEECC
Confidence 65542221 1122233 35667877777667788877753
No 215
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=94.59 E-value=0.098 Score=51.64 Aligned_cols=105 Identities=12% Similarity=0.189 Sum_probs=63.9
Q ss_pred eeEEeeCCEEEEEeCCcEEEEcC-C-CCEEEEE---eCCC-CCCcccCeEEecCCeEEEEECCeEEEEECCCCcccccee
Q 006913 41 KPLIGEDGKIYACSEKTLFAFES-N-GTIAWSL---DLDF-TCNIGTAPVHGGTGEVYIVAENRVLKVDLLKIGTSESAT 114 (626)
Q Consensus 41 spvid~dG~IwIgSdggL~a~d~-~-G~~~W~~---~~~~-~~~i~~sp~iD~dG~IwVgT~ggL~~id~~~~~~~~~~~ 114 (626)
..+++.+|.||+..++.||.+++ + +...|.- .++. ......+++.|.+|.||+++++.|+++++-+..- .
T Consensus 45 ~laf~P~G~LYaV~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav~dG~iyr~~pP~~~~----~ 120 (236)
T 1tl2_A 45 FLFLSPGGELYGVLNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAVSKDKLYKASPPQSDT----D 120 (236)
T ss_dssp EEEECTTSCEEEEETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEEETTEEEEESCCCSTT----C
T ss_pred eEEECCCccEEEEeCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEeCCCEEEEeCCCcCCC----C
Confidence 56666789999888788999987 4 2233311 1111 0112356788999999999999999998733110 1
Q ss_pred EEEe-----cCCCCCCCCCCeeEEEEEEcCCeEEEEEcCCeEEEEe
Q 006913 115 QVFY-----GTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFM 155 (626)
Q Consensus 115 ~~~~-----~~~~~~~~~~~~I~s~~~d~dG~LwIgT~~gGL~a~d 155 (626)
.|.. +...| ..+..+..+.+|.||..+ ++-++.-.
T Consensus 121 ~Wl~~a~~vg~~gw-----~~~~~lff~p~G~Lyav~-dg~lyr~~ 160 (236)
T 1tl2_A 121 NWIARATEVGSGGW-----SGFKFLFFHPNGYLYAVH-GQQFYKAL 160 (236)
T ss_dssp CHHHHSEEEECSSG-----GGEEEEEECTTSCEEEEE-TTEEEEEC
T ss_pred ceeccccEeccCCC-----CceEEEEECCCceEEEEe-CCcEEecC
Confidence 2211 11111 234556678888888887 65565543
No 216
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=94.55 E-value=3.7 Score=39.92 Aligned_cols=197 Identities=12% Similarity=-0.022 Sum_probs=98.2
Q ss_pred ccCeEEecCCeEEE-EE-CCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEc---CCeEEEEEcCCeEEEE
Q 006913 80 GTAPVHGGTGEVYI-VA-ENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTS---SSSVYINVKGRALFAF 154 (626)
Q Consensus 80 ~~sp~iD~dG~IwV-gT-~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~---dG~LwIgT~~gGL~a~ 154 (626)
+.++....+|.+.+ ++ ++.|..++..++..... ....+. .... .|..+.... +..|..++.++-|..+
T Consensus 14 v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~-~~~~~~-----~~~~-~v~~~~~~~~~d~~~l~s~~~dg~v~vw 86 (351)
T 3f3f_A 14 VHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWE-LSDSWR-----AHDS-SIVAIDWASPEYGRIIASASYDKTVKLW 86 (351)
T ss_dssp EEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEE-EEEEEE-----CCSS-CEEEEEECCGGGCSEEEEEETTSCEEEE
T ss_pred eeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcce-ecceec-----cCCC-cEEEEEEcCCCCCCEEEEEcCCCeEEEE
Confidence 34455556666444 44 67788888765321000 011111 1112 333333322 4567777877778888
Q ss_pred eCC-Cc---------EEEEECCcccccccccccccCCCCCccccceEEEcC--CCeEEEEcCCCeEEEEeCCCCeEEE--
Q 006913 155 MTH-GQ---------LLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQC--EGSIYISNTQGELYSLSAHSPYFNW-- 220 (626)
Q Consensus 155 d~~-G~---------~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~--dG~LwIGT~~GgL~~ld~~tg~~~w-- 220 (626)
|.+ ++ ....... . ... ..++...+. +..|..++.++.|..+|.++++...
T Consensus 87 d~~~~~~~~~~~~~~~~~~~~~------------~---~~~-v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~ 150 (351)
T 3f3f_A 87 EEDPDQEECSGRRWNKLCTLND------------S---KGS-LYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSW 150 (351)
T ss_dssp EECTTSCTTSSCSEEEEEEECC------------C---SSC-EEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCC
T ss_pred ecCCCcccccccCcceeeeecc------------c---CCc-eeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccc
Confidence 864 42 2222100 0 011 133444432 3457778888889999987765321
Q ss_pred E-----EcC-----CCCCcceeeeeec----CCeEEEEEcCCCEEEEEECCCCcEEEEEecCCCCCceeeEEEeeCC---
Q 006913 221 I-----QDL-----SSFDKAFTLTPGN----NGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPVVDSNG--- 283 (626)
Q Consensus 221 ~-----~~~-----~s~~~v~sI~~D~----dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~~~sspvvD~dG--- 283 (626)
. ... .....+.++.... ...+.+++. .+.+...+..++..............+.++...+++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~ 229 (351)
T 3f3f_A 151 TLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSAL-EQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRW 229 (351)
T ss_dssp EEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEET-TEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCS
T ss_pred cccccccccccccCCcccceeEEEeccCCCCCcEEEEecC-CCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCc
Confidence 1 000 0112233444333 335666654 455555565666653332222112235556777675
Q ss_pred --eEEEEEcCCeEEEEcCC
Q 006913 284 --WISVGSLDGLLYSFSPS 300 (626)
Q Consensus 284 --~IWVGT~~gGLy~~d~~ 300 (626)
.|..|+.++.|..+|..
T Consensus 230 ~~~l~s~~~dg~i~iwd~~ 248 (351)
T 3f3f_A 230 YQLIATGCKDGRIRIFKIT 248 (351)
T ss_dssp SEEEEEEETTSCEEEEEEE
T ss_pred ceEEEEEcCCCeEEEEeCC
Confidence 57778888888888853
No 217
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=94.49 E-value=4.2 Score=40.23 Aligned_cols=219 Identities=9% Similarity=-0.038 Sum_probs=112.4
Q ss_pred eEEeeCCE-EEEEe-CCcEEEEcC-CCCEEEEEeCCCCCCcccCeEE--ecCCeEEE-EE-CCeEEEEECCCCcccccee
Q 006913 42 PLIGEDGK-IYACS-EKTLFAFES-NGTIAWSLDLDFTCNIGTAPVH--GGTGEVYI-VA-ENRVLKVDLLKIGTSESAT 114 (626)
Q Consensus 42 pvid~dG~-IwIgS-dggL~a~d~-~G~~~W~~~~~~~~~i~~sp~i--D~dG~IwV-gT-~ggL~~id~~~~~~~~~~~ 114 (626)
.....+|. |..++ ++.+..+|. ++......... ..+.++.. ..++.+.+ ++ ++.|..+|..++..
T Consensus 92 ~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~----- 163 (368)
T 3mmy_A 92 VCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHD---APVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNP----- 163 (368)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECS---SCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSC-----
T ss_pred EEECcCCCEEEEEcCCCcEEEEEcCCCCceeecccc---CceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcE-----
Confidence 33434554 44455 566888887 55544322221 12334444 56776444 45 78888888776532
Q ss_pred EEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEcCCeEEEEeCC-CcEEEEECCcccccccccccccCCCCCccccceEEE
Q 006913 115 QVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVID 193 (626)
Q Consensus 115 ~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD 193 (626)
...+.. .... .. .......+++++.++.+..++.. ....+.... . . .. ..........+
T Consensus 164 ~~~~~~------~~~~-~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---~---~----~~--~~~~~~~~~~~ 223 (368)
T 3mmy_A 164 MMVLQL------PERC-YC-ADVIYPMAVVATAERGLIVYQLENQPSEFRRIE---S---P----LK--HQHRCVAIFKD 223 (368)
T ss_dssp SEEEEC------SSCE-EE-EEEETTEEEEEEGGGCEEEEECSSSCEEEEECC---C---S----CS--SCEEEEEEEEC
T ss_pred EEEEec------CCCc-eE-EEecCCeeEEEeCCCcEEEEEeccccchhhhcc---c---c----cc--CCCceEEEccc
Confidence 111111 0111 11 22235578888888889999875 433333200 0 0 00 00000111111
Q ss_pred cC--CCeEEEEcCCCeEEEEeCCCCeE---EEEEcCCC-----------CCcceeeeeecCC-eEEEEEcCCCEEEEEEC
Q 006913 194 QC--EGSIYISNTQGELYSLSAHSPYF---NWIQDLSS-----------FDKAFTLTPGNNG-YLYVTIPVRALVLALDT 256 (626)
Q Consensus 194 ~~--dG~LwIGT~~GgL~~ld~~tg~~---~w~~~~~s-----------~~~v~sI~~D~dG-~LwVGT~~gG~l~alD~ 256 (626)
.. ...+..|+.++.|..++.+.... ........ ...+.++....+| .|..++ .++.+..+|.
T Consensus 224 ~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~-~dg~i~iwd~ 302 (368)
T 3mmy_A 224 KQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVG-SDGRFSFWDK 302 (368)
T ss_dssp TTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEE-TTSCEEEEET
T ss_pred CCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEc-cCCeEEEEEC
Confidence 10 11288888888888888877521 11111000 0135666666677 455555 4578888998
Q ss_pred CCCcEEEEEecCCCCCceeeEEEeeCCe-EEEEEcC
Q 006913 257 SSGNILWHKSVGPLGSAEYAPVVDSNGW-ISVGSLD 291 (626)
Q Consensus 257 ~tG~~~w~~~~~~l~~~~sspvvD~dG~-IWVGT~~ 291 (626)
.+++........ ...+..+...++|. |..|+.+
T Consensus 303 ~~~~~~~~~~~~--~~~v~~~~~s~~g~~l~~~s~d 336 (368)
T 3mmy_A 303 DARTKLKTSEQL--DQPISACCFNHNGNIFAYASSY 336 (368)
T ss_dssp TTTEEEEECCCC--SSCEEEEEECTTSSCEEEEECC
T ss_pred CCCcEEEEecCC--CCCceEEEECCCCCeEEEEecc
Confidence 888876554322 22355677776765 4555543
No 218
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=94.27 E-value=0.46 Score=49.45 Aligned_cols=112 Identities=12% Similarity=0.097 Sum_probs=65.3
Q ss_pred ceEEEcCCCe-EEEEcCCCeEEEEeCCCCeEE-EEEcCC-----CCCcceeeeeec----CCeEEEEEcC-------CCE
Q 006913 189 VPVIDQCEGS-IYISNTQGELYSLSAHSPYFN-WIQDLS-----SFDKAFTLTPGN----NGYLYVTIPV-------RAL 250 (626)
Q Consensus 189 spviD~~dG~-LwIGT~~GgL~~ld~~tg~~~-w~~~~~-----s~~~v~sI~~D~----dG~LwVGT~~-------gG~ 250 (626)
.+..++ +|+ |||+...|.|++++.++ ... ...... .......++.+. ++.||+.... ...
T Consensus 22 ~i~~~p-dG~~l~V~e~~G~i~~~~~~g-~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~ 99 (353)
T 2g8s_A 22 ALAFLP-DNHGMLITLRGGELRHWQAGK-GLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTA 99 (353)
T ss_dssp EEEECS-TTCCEEEEETTTEEEEEETTT-EECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEEE
T ss_pred EEEEcC-CCCEEEEEeCCceEEEEeCCC-ceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCceeE
Confidence 356675 888 99999889999998764 332 111111 111234566664 6899998532 125
Q ss_pred EEEEECCCC--cEE-EE--E-ecCC---CCCceeeEEEeeCCeEEEEEcC--------------CeEEEEcCCCC
Q 006913 251 VLALDTSSG--NIL-WH--K-SVGP---LGSAEYAPVVDSNGWISVGSLD--------------GLLYSFSPSGV 302 (626)
Q Consensus 251 l~alD~~tG--~~~-w~--~-~~~~---l~~~~sspvvD~dG~IWVGT~~--------------gGLy~~d~~g~ 302 (626)
+..++...+ ... .. . ..+. .......++++++|+||+++.+ +.|++++++|.
T Consensus 100 v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~ 174 (353)
T 2g8s_A 100 VGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGE 174 (353)
T ss_dssp EEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSC
T ss_pred EEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCC
Confidence 666654322 221 11 1 1110 0112346888999999999743 47899988764
No 219
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=94.27 E-value=5.3 Score=40.60 Aligned_cols=186 Identities=9% Similarity=-0.076 Sum_probs=103.0
Q ss_pred eEEecCCe-EEEEE-CCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEE--EcC-CeEEEEEcCCeEEEEeCC
Q 006913 83 PVHGGTGE-VYIVA-ENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVS--TSS-SSVYINVKGRALFAFMTH 157 (626)
Q Consensus 83 p~iD~dG~-IwVgT-~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~--d~d-G~LwIgT~~gGL~a~d~~ 157 (626)
+....++. |..++ ++.|...|..++.. ...+.. ... .+..... ..+ ..|+.|+.++.+..+|..
T Consensus 160 ~~~~~~~~~l~t~s~D~~v~lwd~~~~~~-----~~~~~~-----h~~-~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~ 228 (354)
T 2pbi_B 160 CSFTNSDMQILTASGDGTCALWDVESGQL-----LQSFHG-----HGA-DVLCLDLAPSETGNTFVSGGCDKKAMVWDMR 228 (354)
T ss_dssp EEECSSSSEEEEEETTSEEEEEETTTCCE-----EEEEEC-----CSS-CEEEEEECCCSSCCEEEEEETTSCEEEEETT
T ss_pred EEEeCCCCEEEEEeCCCcEEEEeCCCCeE-----EEEEcC-----CCC-CeEEEEEEeCCCCCEEEEEeCCCeEEEEECC
Confidence 33444554 55555 78888889877632 111111 112 2222222 223 467778888889999974
Q ss_pred -CcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcCCCeEEEEeCCCCeEEEEEcCCC-CCcceeeee
Q 006913 158 -GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSS-FDKAFTLTP 235 (626)
Q Consensus 158 -G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s-~~~v~sI~~ 235 (626)
++....+.. + ...+ .++...+.+..|..|+.++.|..+|.+++.......... ...+.++..
T Consensus 229 ~~~~~~~~~~------------h---~~~v-~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~ 292 (354)
T 2pbi_B 229 SGQCVQAFET------------H---ESDV-NSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDF 292 (354)
T ss_dssp TCCEEEEECC------------C---SSCE-EEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEE
T ss_pred CCcEEEEecC------------C---CCCe-EEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEE
Confidence 766544310 0 0111 334444324567778888889999998876544332211 123445555
Q ss_pred ecCCeEEEEEcCCCEEEEEECCCCcEEEEEecCCCCCceeeEEEeeCCe-EEEEEcCCeEEEE
Q 006913 236 GNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPVVDSNGW-ISVGSLDGLLYSF 297 (626)
Q Consensus 236 D~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~~~sspvvD~dG~-IWVGT~~gGLy~~ 297 (626)
..+|.+.+....++.+..+|..++......... ...+.++...++|. |..|+.++.|..+
T Consensus 293 s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h--~~~v~~l~~spdg~~l~sgs~D~~v~vW 353 (354)
T 2pbi_B 293 SLSGRLLFAGYNDYTINVWDVLKGSRVSILFGH--ENRVSTLRVSPDGTAFCSGSWDHTLRVW 353 (354)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCSEEEEECCC--SSCEEEEEECTTSSCEEEEETTSEEEEE
T ss_pred eCCCCEEEEEECCCcEEEEECCCCceEEEEECC--CCcEEEEEECCCCCEEEEEcCCCCEEec
Confidence 667765544435578888898888765443211 12345566666664 5556666666554
No 220
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=94.19 E-value=5.2 Score=40.17 Aligned_cols=188 Identities=11% Similarity=0.002 Sum_probs=101.2
Q ss_pred EEEEE-CCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEcCCeEEEEeCC-CcEEEEECCcc
Q 006913 91 VYIVA-ENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTH-GQLLWSAGPVL 168 (626)
Q Consensus 91 IwVgT-~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~~gGL~a~d~~-G~~~w~~~~~~ 168 (626)
+..|. ++.|..+|..++... ..........-..... .+....|+.+.+-...+.+..++.. ++.+..+.
T Consensus 51 l~sg~~Dg~v~iwd~~~~~~~---~~~~~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~--- 121 (343)
T 3lrv_A 51 CMCRCEDGALHFTQLKDSKTI---TTITTPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIE--- 121 (343)
T ss_dssp EEEEEETTEEEEEEESSSSCE---EEEEEECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEE---
T ss_pred EEEECCCCcEEEEECCCCcEE---EEEecCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEee---
Confidence 44444 788888888766421 1111111000000011 2333466777766666677777754 55433320
Q ss_pred cccccccccccCCCCCccccceEEEc--CCCeEEEEcCCCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCCeEEEEEc
Q 006913 169 DQLGYRQGCTKTDVDCYFTSVPVIDQ--CEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIP 246 (626)
Q Consensus 169 ~~~~~~~~~~~~l~~~~i~sspviD~--~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG~LwVGT~ 246 (626)
.+ +. ..+ ..+...+ .+..+..|+.++.|..+|.++++............+.++....+|.+.+...
T Consensus 122 --~~------~~---~~v-~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~ 189 (343)
T 3lrv_A 122 --VD------SA---NEI-IYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYS 189 (343)
T ss_dssp --CC------CS---SCE-EEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEEC
T ss_pred --cC------CC---CCE-EEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEc
Confidence 00 00 011 1122221 1455666888899999999988775443222222356667777887666433
Q ss_pred CCCEEEEEECCCCcEE-EEEecCCCCCceeeEEEeeCCeEEEEEcCCeEEEEcCC
Q 006913 247 VRALVLALDTSSGNIL-WHKSVGPLGSAEYAPVVDSNGWISVGSLDGLLYSFSPS 300 (626)
Q Consensus 247 ~gG~l~alD~~tG~~~-w~~~~~~l~~~~sspvvD~dG~IWVGT~~gGLy~~d~~ 300 (626)
.++.+..+|..+++.. ....... ...+.++...++|...+.+.++.|..+|..
T Consensus 190 ~dg~i~iwd~~~~~~~~~~~~~~h-~~~v~~l~fs~~g~~l~s~~~~~v~iwd~~ 243 (343)
T 3lrv_A 190 PDGILDVYNLSSPDQASSRFPVDE-EAKIKEVKFADNGYWMVVECDQTVVCFDLR 243 (343)
T ss_dssp TTSCEEEEESSCTTSCCEECCCCT-TSCEEEEEECTTSSEEEEEESSBEEEEETT
T ss_pred CCCEEEEEECCCCCCCccEEeccC-CCCEEEEEEeCCCCEEEEEeCCeEEEEEcC
Confidence 5678888998888755 3333211 123556777777764444336689999864
No 221
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=94.17 E-value=1.1 Score=49.87 Aligned_cols=161 Identities=20% Similarity=0.340 Sum_probs=89.7
Q ss_pred cCCeEEEEEcCCeEEEEeCCCcEEEEECCc--ccccccccccccCCC----CCccccceEE-EcC-CC---eEEEEc-C-
Q 006913 138 SSSSVYINVKGRALFAFMTHGQLLWSAGPV--LDQLGYRQGCTKTDV----DCYFTSVPVI-DQC-EG---SIYISN-T- 204 (626)
Q Consensus 138 ~dG~LwIgT~~gGL~a~d~~G~~~w~~~~~--~~~~~~~~~~~~~l~----~~~i~sspvi-D~~-dG---~LwIGT-~- 204 (626)
+...||+|+.++-|.+|+..|+.+|.+-|. +..+. ... ..+.. ...+..+|.+ |-. ++ .+.+|+ .
T Consensus 84 R~~~VyvGaNDGmLHaF~a~G~E~wAfiP~~~l~~L~-~l~-~~~y~~~~h~Y~VDG~p~~~Dv~~~g~wrtvLvggmg~ 161 (570)
T 3hx6_A 84 RAPRVYVGANDGMLHGFDTDGNETFAFIPSAVFEKMH-KLT-ARGYQGGAHQFYVDGSPVVADAFFGGAWHTVLIGSLRA 161 (570)
T ss_dssp CCCEEEEECSSSCEEECCSSCCCCEEECCHHHHHHCC---------CCHHHHHHHHCCCEEEEEEETTEEEEEEEEECTT
T ss_pred CccEEEEECCCceEEEECCCCcEEEEECCHHHHHHHH-HHh-ccCccccCcceecCCCCEEEEEEeCCcceEEEEEecCC
Confidence 457899999888899999889999986331 11110 000 00000 0011122332 100 11 233443 2
Q ss_pred -CCeEEEEeCCC---CeEEEEEcCC---CCC---cceeeeeecCCe--EEEEEc-----CCCEEEEEECCCCcEEEEEec
Q 006913 205 -QGELYSLSAHS---PYFNWIQDLS---SFD---KAFTLTPGNNGY--LYVTIP-----VRALVLALDTSSGNILWHKSV 267 (626)
Q Consensus 205 -~GgL~~ld~~t---g~~~w~~~~~---s~~---~v~sI~~D~dG~--LwVGT~-----~gG~l~alD~~tG~~~w~~~~ 267 (626)
..++|+||..+ .++.|..... ... .-+.|..-.+|+ +.+|.- ++..||.+|..+|..+|....
T Consensus 162 GG~~~yALDVT~P~~p~~LWe~~~~~~~~LG~t~s~P~I~~~~~g~w~~vfG~GY~~~~~~~~Lyv~d~~tG~li~~i~~ 241 (570)
T 3hx6_A 162 GGKGLFALDVTDPANIKLLWEIGVDQEPDLGYSFPKPTVARLHNGKWAVVTGNGYSSMNDKAALLIIDMETGAITRKLEV 241 (570)
T ss_dssp SCSEEEEEECSSGGGCEEEEEEETTTCTTCCBCCSCCEEEECTTSSEEEEEECCBSCTTCCEEEEEEETTTCCEEEEEEE
T ss_pred CCcEEEEEECCCCCCCceeEEECCCCccccCccccCCEEEEecCCCEEEEEccccCCCCCccEEEEEECCCCceEEEEec
Confidence 34799999765 6799986522 111 123344434554 333321 134799999999999998654
Q ss_pred CCC---CCceeeE-EEeeC-----CeEEEEEcCCeEEEEcCC
Q 006913 268 GPL---GSAEYAP-VVDSN-----GWISVGSLDGLLYSFSPS 300 (626)
Q Consensus 268 ~~l---~~~~ssp-vvD~d-----G~IWVGT~~gGLy~~d~~ 300 (626)
... ....+.+ ++|.+ +.+|+|...|.||+||..
T Consensus 242 ~~~~~~~~Gls~~~~~D~d~Dg~~D~~YaGDl~GnlWRfDl~ 283 (570)
T 3hx6_A 242 TGRTGVPNGLSSPRLADNNSDGVADYAYAGDLQGNLWRFDLI 283 (570)
T ss_dssp CCSTTSCCCEEEEEEECTTSSSBCCEEEEEETTSEEEEEECS
T ss_pred CCCCccCCccccceEEecCCCCceeEEEEEeCCCcEEEEEcC
Confidence 321 1123444 35544 369999999999999964
No 222
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=94.16 E-value=5.8 Score=40.63 Aligned_cols=190 Identities=9% Similarity=0.020 Sum_probs=103.6
Q ss_pred eEEEEE-CCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEcCC-eEEEEEcCCeEEEEeCC--CcEEEEEC
Q 006913 90 EVYIVA-ENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSS-SVYINVKGRALFAFMTH--GQLLWSAG 165 (626)
Q Consensus 90 ~IwVgT-~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG-~LwIgT~~gGL~a~d~~--G~~~w~~~ 165 (626)
.+..++ ++.|...|..++.. ...+...........+........++ .+..|+.++-+..+|.. ++....+.
T Consensus 172 ~l~s~s~D~~i~~wd~~~~~~-----~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~ 246 (380)
T 3iz6_a 172 RLITGSGDQTCVLWDVTTGQR-----ISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYH 246 (380)
T ss_dssp CEEEECTTSCEEEECTTTCCE-----EEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEEC
T ss_pred EEEEECCCCcEEEEEcCCCcE-----EEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEEC
Confidence 466565 78888889877631 11222111111222233322223244 45566777888888863 33322220
Q ss_pred CcccccccccccccCCCCCccccceEEEcCCCeEEEEcCCCeEEEEeCCCCeEEEEEcCCC------CCcceeeeeecCC
Q 006913 166 PVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSS------FDKAFTLTPGNNG 239 (626)
Q Consensus 166 ~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s------~~~v~sI~~D~dG 239 (626)
+ +. .. ..++...+.+..|..|+.++.|..+|.++++......... ...+.+++...+|
T Consensus 247 ------~------h~---~~-v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g 310 (380)
T 3iz6_a 247 ------G------HE---GD-INSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISG 310 (380)
T ss_dssp ------C------CS---SC-CCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSS
T ss_pred ------C------cC---CC-eEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCC
Confidence 0 00 11 1334454424456777788999999999987654432211 1124566666677
Q ss_pred eEEEEEcCCCEEEEEECCCCcEEEEEec--CCCCCceeeEEEeeCCe-EEEEEcCCeEEEEcCC
Q 006913 240 YLYVTIPVRALVLALDTSSGNILWHKSV--GPLGSAEYAPVVDSNGW-ISVGSLDGLLYSFSPS 300 (626)
Q Consensus 240 ~LwVGT~~gG~l~alD~~tG~~~w~~~~--~~l~~~~sspvvD~dG~-IWVGT~~gGLy~~d~~ 300 (626)
.+.+....++.+...|..+++....... ..-...+.++...++|. |..|+.++.|..++..
T Consensus 311 ~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~ 374 (380)
T 3iz6_a 311 RLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFS 374 (380)
T ss_dssp SEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECC
T ss_pred CEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecC
Confidence 6555544567888899888877654321 11112345566766765 5556677777777643
No 223
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=94.14 E-value=6.2 Score=40.90 Aligned_cols=260 Identities=8% Similarity=-0.040 Sum_probs=137.3
Q ss_pred CCEEEEEeCCcEEEEcC-CCCEEEEEeCCCCCCcccCeEEecCCeEEE-EE-CCeEEEEECCCCccccceeEEEecCCCC
Q 006913 47 DGKIYACSEKTLFAFES-NGTIAWSLDLDFTCNIGTAPVHGGTGEVYI-VA-ENRVLKVDLLKIGTSESATQVFYGTGSG 123 (626)
Q Consensus 47 dG~IwIgSdggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~dG~IwV-gT-~ggL~~id~~~~~~~~~~~~~~~~~~~~ 123 (626)
++.|-+|.++.++.+|. +|+....+........+.++....+|++.+ |+ ++.|...|..++.. ...+.
T Consensus 116 ~n~lAvgld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~-----~~~~~---- 186 (420)
T 4gga_A 116 GNVLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKR-----LRNMT---- 186 (420)
T ss_dssp TSEEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE-----EEEEC----
T ss_pred CCEEEEEeCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcE-----EEEEe----
Confidence 44455566888999998 888765444432223455666677777544 55 78888899887631 12221
Q ss_pred CCCCCCeeEEEEEEcCCeEEEEEcCCeEEEEeCC--CcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEE
Q 006913 124 KGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTH--GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYI 201 (626)
Q Consensus 124 ~~~~~~~I~s~~~d~dG~LwIgT~~gGL~a~d~~--G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwI 201 (626)
.... .+... ......|..|+.++.+..++.. ........ + +. .. .........+..+..
T Consensus 187 -~h~~-~v~~~-s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~------~------h~---~~-~~~~~~~~~g~~l~s 247 (420)
T 4gga_A 187 -SHSA-RVGSL-SWNSYILSSGSRSGHIHHHDVRVAEHHVATLS------G------HS---QE-VCGLRWAPDGRHLAS 247 (420)
T ss_dssp -CCSS-CEEEE-EEETTEEEEEETTSEEEEEETTSSSCEEEEEE------C------CS---SC-EEEEEECTTSSEEEE
T ss_pred -CCCC-ceEEE-eeCCCEEEEEeCCCceeEeeecccceeeEEec------c------cc---cc-eeeeeecCCCCeeee
Confidence 1112 22222 2234556667777777777753 22222210 0 00 00 112233322445666
Q ss_pred EcCCCeEEEEeCCCCeEEEE---EcCCCCCcceeeeee--cCCeEEEEEc-CCCEEEEEECCCCcEEEEEecCCCCCcee
Q 006913 202 SNTQGELYSLSAHSPYFNWI---QDLSSFDKAFTLTPG--NNGYLYVTIP-VRALVLALDTSSGNILWHKSVGPLGSAEY 275 (626)
Q Consensus 202 GT~~GgL~~ld~~tg~~~w~---~~~~s~~~v~sI~~D--~dG~LwVGT~-~gG~l~alD~~tG~~~w~~~~~~l~~~~s 275 (626)
+..++.+..++..+++..+. ........+.++... ....+.+++. .++.+...|..+|.......... ...
T Consensus 248 ~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~---~v~ 324 (420)
T 4gga_A 248 GGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHS---QVC 324 (420)
T ss_dssp EETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSS---CEE
T ss_pred eeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeecccc---cee
Confidence 77788888888776543211 000111233343332 2334444431 34678888998998776654432 234
Q ss_pred eEEEeeC-CeEEEEE--cCCeEEEEcCC-CCEEEEeeccCCCCccccCceEEEEEEecCCcEEEEEeeecCeeEE
Q 006913 276 APVVDSN-GWISVGS--LDGLLYSFSPS-GVLNKFSKSDTSDSVIQSSPYWFHLLGPSIGLKAILCLMVVGQFSS 346 (626)
Q Consensus 276 spvvD~d-G~IWVGT--~~gGLy~~d~~-g~~~~~~~~~~~~~~ilssp~V~~Il~DsdG~IwI~T~t~~Ggl~~ 346 (626)
+.+...+ +.+.+++ .++.|+.+|.. ++...... . ....|.++....+|... .++...|-+..
T Consensus 325 ~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~---g-----H~~~V~~l~~spdg~~l-~S~s~D~tvri 390 (420)
T 4gga_A 325 SILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELK---G-----HTSRVLSLTMSPDGATV-ASAAADETLRL 390 (420)
T ss_dssp EEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEEC---C-----CSSCEEEEEECTTSSCE-EEEETTTEEEE
T ss_pred eeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEc---C-----CCCCEEEEEEcCCCCEE-EEEecCCeEEE
Confidence 4555444 4555555 56789999864 65544332 1 12345666666677653 45554454443
No 224
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=94.01 E-value=4.3 Score=38.54 Aligned_cols=209 Identities=11% Similarity=0.058 Sum_probs=102.1
Q ss_pred CcEEEEcC-CCCEEEEEeCCCCCCcccCeEEecCCeEEEE-ECCeEEEEECCC-CccccceeEEEecCCCCCCCCCCeeE
Q 006913 56 KTLFAFES-NGTIAWSLDLDFTCNIGTAPVHGGTGEVYIV-AENRVLKVDLLK-IGTSESATQVFYGTGSGKGGTGAIAG 132 (626)
Q Consensus 56 ggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~dG~IwVg-T~ggL~~id~~~-~~~~~~~~~~~~~~~~~~~~~~~~I~ 132 (626)
+.|+.+|. +++........ ..+.++....+|+.++. .++.|+.+|..+ +.. .... .. .....+.
T Consensus 22 ~~i~~~d~~~~~~~~~~~~~---~~v~~~~~spdg~~l~~~~~~~i~~~d~~~~~~~-----~~~~-~~----~~~~~~~ 88 (297)
T 2ojh_A 22 SSIEIFNIRTRKMRVVWQTP---ELFEAPNWSPDGKYLLLNSEGLLYRLSLAGDPSP-----EKVD-TG----FATICNN 88 (297)
T ss_dssp EEEEEEETTTTEEEEEEEES---SCCEEEEECTTSSEEEEEETTEEEEEESSSCCSC-----EECC-CT----TCCCBCS
T ss_pred eeEEEEeCCCCceeeeccCC---cceEeeEECCCCCEEEEEcCCeEEEEeCCCCCCc-----eEec-cc----ccccccc
Confidence 46888887 66554322221 23446667778885554 488999999877 531 1111 10 1111222
Q ss_pred EEEEEcCCe-EEEEEc----CCeEEEEeCC-CcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEE-EEcCC
Q 006913 133 IAVSTSSSS-VYINVK----GRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIY-ISNTQ 205 (626)
Q Consensus 133 s~~~d~dG~-LwIgT~----~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~Lw-IGT~~ 205 (626)
.+....+|. |+++.. ...|+.++.. ++. ..... . .. ...+...+.+..|+ .+..+
T Consensus 89 ~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~-~~~~~------------~----~~-~~~~~~spdg~~l~~~~~~~ 150 (297)
T 2ojh_A 89 DHGISPDGALYAISDKVEFGKSAIYLLPSTGGTP-RLMTK------------N----LP-SYWHGWSPDGKSFTYCGIRD 150 (297)
T ss_dssp CCEECTTSSEEEEEECTTTSSCEEEEEETTCCCC-EECCS------------S----SS-EEEEEECTTSSEEEEEEEET
T ss_pred ceEECCCCCEEEEEEeCCCCcceEEEEECCCCce-EEeec------------C----CC-ccceEECCCCCEEEEEECCC
Confidence 233334554 444441 3567777764 332 11100 0 00 12234443133354 34444
Q ss_pred C--eEEEEeCCCCeEEEEEcCCCCCcceeeeeecCCe-EEEEEc--CCCEEEEEECCCCcEEEEEecCCCCCceeeEEEe
Q 006913 206 G--ELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGY-LYVTIP--VRALVLALDTSSGNILWHKSVGPLGSAEYAPVVD 280 (626)
Q Consensus 206 G--gL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG~-LwVGT~--~gG~l~alD~~tG~~~w~~~~~~l~~~~sspvvD 280 (626)
+ .|+.++..++....... ....+..+....+|. |+++.. ....++.++..++.... .... ......+...
T Consensus 151 ~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~-~~~~--~~~~~~~~~s 225 (297)
T 2ojh_A 151 QVFDIYSMDIDSGVETRLTH--GEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVER-ITDS--AYGDWFPHPS 225 (297)
T ss_dssp TEEEEEEEETTTCCEEECCC--SSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEE-CCCC--SEEEEEEEEC
T ss_pred CceEEEEEECCCCcceEccc--CCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEE-EecC--CcccCCeEEC
Confidence 4 46677777765533211 112344555666775 555542 23467777755554432 1111 1123446666
Q ss_pred eCCe-EEEEEcC-----------CeEEEEcCC
Q 006913 281 SNGW-ISVGSLD-----------GLLYSFSPS 300 (626)
Q Consensus 281 ~dG~-IWVGT~~-----------gGLy~~d~~ 300 (626)
++|. |++++.+ ..|+.+|..
T Consensus 226 ~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~ 257 (297)
T 2ojh_A 226 PSGDKVVFVSYDADVFDHPRDLDVRVQLMDMD 257 (297)
T ss_dssp TTSSEEEEEEEETTCCSCCSSEEEEEEEEETT
T ss_pred CCCCEEEEEEcCCCCCcccccCceEEEEEecC
Confidence 6765 5555543 348888865
No 225
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=94.00 E-value=1.3 Score=44.92 Aligned_cols=192 Identities=9% Similarity=-0.059 Sum_probs=92.0
Q ss_pred ccCeEEecCCeEEEEE--CCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEcCC-eEEEEEcCCeEEEEeC
Q 006913 80 GTAPVHGGTGEVYIVA--ENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSS-SVYINVKGRALFAFMT 156 (626)
Q Consensus 80 ~~sp~iD~dG~IwVgT--~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG-~LwIgT~~gGL~a~d~ 156 (626)
+.++....+|++.+.. ++.|..++..++. +.... ...... ..+..+....++ .|..++.++.|..+|.
T Consensus 14 v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~-------~~~~~-~~~~h~-~~v~~~~~s~~~~~l~s~s~d~~v~vwd~ 84 (377)
T 3dwl_C 14 SYEHAFNSQRTEFVTTTATNQVELYEQDGNG-------WKHAR-TFSDHD-KIVTCVDWAPKSNRIVTCSQDRNAYVYEK 84 (377)
T ss_dssp CSCCEECSSSSEEECCCSSSCBCEEEEETTE-------EEECC-CBCCCS-SCEEEEEECTTTCCEEEEETTSSEEEC--
T ss_pred EEEEEECCCCCEEEEecCCCEEEEEEccCCc-------eEEEE-EEecCC-ceEEEEEEeCCCCEEEEEeCCCeEEEEEc
Confidence 4455666677755433 5667777766541 10000 001112 234444444444 5667777788888886
Q ss_pred C-Cc---EEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcCCCeEEEEeCCCCeE---EEEEcCCCCCc
Q 006913 157 H-GQ---LLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYF---NWIQDLSSFDK 229 (626)
Q Consensus 157 ~-G~---~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~~GgL~~ld~~tg~~---~w~~~~~s~~~ 229 (626)
. ++ ...... + + ...+ ..+...+.+..|..|+.++.|..+|.++++. ...........
T Consensus 85 ~~~~~~~~~~~~~------~------~---~~~v-~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~ 148 (377)
T 3dwl_C 85 RPDGTWKQTLVLL------R------L---NRAA-TFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRST 148 (377)
T ss_dssp ----CCCCEEECC------C------C---SSCE-EEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSC
T ss_pred CCCCceeeeeEec------c------c---CCce-EEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCC
Confidence 4 43 111110 0 0 0111 2233333245677888888898888887652 11111101234
Q ss_pred ceeeeeecCCe-EEEEEcCCCEEEEEECCC------------------CcEEEEEecCCCCCceeeEEEeeCCe-EEEEE
Q 006913 230 AFTLTPGNNGY-LYVTIPVRALVLALDTSS------------------GNILWHKSVGPLGSAEYAPVVDSNGW-ISVGS 289 (626)
Q Consensus 230 v~sI~~D~dG~-LwVGT~~gG~l~alD~~t------------------G~~~w~~~~~~l~~~~sspvvD~dG~-IWVGT 289 (626)
+.++....+|. |..++ .++.+..+|..+ +...... . ....+.++...++|. |..|+
T Consensus 149 v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~v~~~~~sp~~~~l~~~~ 224 (377)
T 3dwl_C 149 ILSLDWHPNNVLLAAGC-ADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY--P-SGGWVHAVGFSPSGNALAYAG 224 (377)
T ss_dssp EEEEEECTTSSEEEEEE-SSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC--C-CSSSEEEEEECTTSSCEEEEE
T ss_pred eEEEEEcCCCCEEEEEe-CCCEEEEEEEEecccCCCccccccccccchhhhhhcc--c-CCceEEEEEECCCCCEEEEEe
Confidence 56666666774 55555 345666666532 2222111 1 112345566766665 77788
Q ss_pred cCCeEEEEcCC
Q 006913 290 LDGLLYSFSPS 300 (626)
Q Consensus 290 ~~gGLy~~d~~ 300 (626)
.++.|..+|..
T Consensus 225 ~d~~i~iwd~~ 235 (377)
T 3dwl_C 225 HDSSVTIAYPS 235 (377)
T ss_dssp TTTEEC-CEEC
T ss_pred CCCcEEEEECC
Confidence 88888888854
No 226
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=93.96 E-value=6 Score=40.04 Aligned_cols=152 Identities=9% Similarity=0.033 Sum_probs=88.6
Q ss_pred eEEEEEEcCC--eEEEEEcCCeEEEEeCC-CcEEEEECCcccccccccccccCCCCCccccceEEEc-CCCeEEEEcCCC
Q 006913 131 AGIAVSTSSS--SVYINVKGRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQ-CEGSIYISNTQG 206 (626)
Q Consensus 131 I~s~~~d~dG--~LwIgT~~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~-~dG~LwIGT~~G 206 (626)
|..+....++ .|..|+.++.|..+|.. ++....... .+ + ...+ .++...+ .+..|..++.++
T Consensus 76 v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~----~~------h---~~~v-~~~~~~~~~~~~l~s~~~d~ 141 (383)
T 3ei3_B 76 VTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQG----MG------P---GDAI-TGMKFNQFNTNQLFVSSIRG 141 (383)
T ss_dssp EEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECC----CS------T---TCBE-EEEEEETTEEEEEEEEETTT
T ss_pred EEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeec----CC------c---CCce-eEEEeCCCCCCEEEEEeCCC
Confidence 3333333443 67777778888889975 554433200 00 0 0112 3344432 135577788889
Q ss_pred eEEEEeCCCCeEEEEEcCCC-CCcceeeeeecCCe-EEEEEcCCCEEEEEECCCCcEEEEEecCCCCCceeeEEEeeCC-
Q 006913 207 ELYSLSAHSPYFNWIQDLSS-FDKAFTLTPGNNGY-LYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPVVDSNG- 283 (626)
Q Consensus 207 gL~~ld~~tg~~~w~~~~~s-~~~v~sI~~D~dG~-LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~~~sspvvD~dG- 283 (626)
.|..+|.++....-...... ...+.++....++. |..|+ .++.+..+|. +++........ ...+.++...+++
T Consensus 142 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~i~d~-~~~~~~~~~~h--~~~v~~~~~~~~~~ 217 (383)
T 3ei3_B 142 ATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGD-STGRLLLLGL-DGHEIFKEKLH--KAKVTHAEFNPRCD 217 (383)
T ss_dssp EEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEE-TTSEEEEEET-TSCEEEEEECS--SSCEEEEEECSSCT
T ss_pred EEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEEC-CCCCEEEEEC-CCCEEEEeccC--CCcEEEEEECCCCC
Confidence 99999998755443332221 23456666666664 55555 5678888996 56665554322 1235556676666
Q ss_pred -eEEEEEcCCeEEEEcCC
Q 006913 284 -WISVGSLDGLLYSFSPS 300 (626)
Q Consensus 284 -~IWVGT~~gGLy~~d~~ 300 (626)
.+..|+.++.|..+|..
T Consensus 218 ~~l~s~~~d~~i~iwd~~ 235 (383)
T 3ei3_B 218 WLMATSSVDATVKLWDLR 235 (383)
T ss_dssp TEEEEEETTSEEEEEEGG
T ss_pred CEEEEEeCCCEEEEEeCC
Confidence 47778888899999853
No 227
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=93.75 E-value=5.5 Score=45.44 Aligned_cols=232 Identities=9% Similarity=0.005 Sum_probs=113.0
Q ss_pred EeeCCE-EEEEe-CCcEEEEcC-CCCEEEEEeCCCCCCcccCeEEecC--CeEE-EEE-CCeEEEEECCCCccccceeEE
Q 006913 44 IGEDGK-IYACS-EKTLFAFES-NGTIAWSLDLDFTCNIGTAPVHGGT--GEVY-IVA-ENRVLKVDLLKIGTSESATQV 116 (626)
Q Consensus 44 id~dG~-IwIgS-dggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~d--G~Iw-VgT-~ggL~~id~~~~~~~~~~~~~ 116 (626)
...+|. |..|+ ++.+..+|. ++..............+.++....+ +++. .++ ++.|..+|..++.. . ...
T Consensus 17 ~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~--~-~~~ 93 (753)
T 3jro_A 17 LDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRW--S-QIA 93 (753)
T ss_dssp CCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEE--E-EEE
T ss_pred ECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcc--c-ccc
Confidence 334554 44455 556777775 3322211111111122334444443 5544 455 67788888776521 0 011
Q ss_pred EecCCCCCCCCCCeeEEEEEE-c--CCeEEEEEcCCeEEEEeCC-CcE--EEEECCcccccccccccccCCCCCccccce
Q 006913 117 FYGTGSGKGGTGAIAGIAVST-S--SSSVYINVKGRALFAFMTH-GQL--LWSAGPVLDQLGYRQGCTKTDVDCYFTSVP 190 (626)
Q Consensus 117 ~~~~~~~~~~~~~~I~s~~~d-~--dG~LwIgT~~gGL~a~d~~-G~~--~w~~~~~~~~~~~~~~~~~~l~~~~i~ssp 190 (626)
.+. .... .+..+... . +..+..|+.++.+..+|.. +.. ...... +. ..+ .++
T Consensus 94 ~~~-----~h~~-~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~------------~~---~~v-~~l 151 (753)
T 3jro_A 94 VHA-----VHSA-SVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDA------------HA---IGV-NSA 151 (753)
T ss_dssp EEC-----CCSS-CEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEEC------------CS---SCE-EEE
T ss_pred ccc-----CCCC-CeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeec------------CC---Cce-EEE
Confidence 111 1112 33433333 3 4567778888888888864 311 111100 00 001 112
Q ss_pred EEEc-------------CCCeEEEEcCCCeEEEEeCCCCeEEEE--EcCC-CCCcceeeeeecC---CeEEEEEcCCCEE
Q 006913 191 VIDQ-------------CEGSIYISNTQGELYSLSAHSPYFNWI--QDLS-SFDKAFTLTPGNN---GYLYVTIPVRALV 251 (626)
Q Consensus 191 viD~-------------~dG~LwIGT~~GgL~~ld~~tg~~~w~--~~~~-s~~~v~sI~~D~d---G~LwVGT~~gG~l 251 (626)
...+ .+..|..|+.+|.|..+|.+++...+. .... ....+.++....+ |.+.+....++.+
T Consensus 152 ~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I 231 (753)
T 3jro_A 152 SWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTC 231 (753)
T ss_dssp EECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCE
T ss_pred EecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEE
Confidence 2211 145678888888899998877643222 1111 1234566666666 6544444345677
Q ss_pred EEEECCCCcEEEEEec---CCCCCceeeEEEeeCC-eEEEEEcCCeEEEEcCC
Q 006913 252 LALDTSSGNILWHKSV---GPLGSAEYAPVVDSNG-WISVGSLDGLLYSFSPS 300 (626)
Q Consensus 252 ~alD~~tG~~~w~~~~---~~l~~~~sspvvD~dG-~IWVGT~~gGLy~~d~~ 300 (626)
..+|..++...+.... ......+.++...++| .+..|+.+|.|+.++..
T Consensus 232 ~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~ 284 (753)
T 3jro_A 232 IIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (753)
T ss_dssp EEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCC
T ss_pred EEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecC
Confidence 7777666532211111 0011224456666666 46677788888888864
No 228
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=93.48 E-value=8 Score=39.91 Aligned_cols=108 Identities=12% Similarity=0.037 Sum_probs=68.1
Q ss_pred CCeEEEEcCCCeEEEEeCCCCeEEEEEcCC-CCCcceeeeeecCCe-EEEEEcCCCEEEEEECCCCcEEEEEecCCCCCc
Q 006913 196 EGSIYISNTQGELYSLSAHSPYFNWIQDLS-SFDKAFTLTPGNNGY-LYVTIPVRALVLALDTSSGNILWHKSVGPLGSA 273 (626)
Q Consensus 196 dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~-s~~~v~sI~~D~dG~-LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~~ 273 (626)
+..|..|+.++.|..+|.++++........ ....+.++....++. |..|+ .++.+..+|..++.......... ...
T Consensus 182 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~-~~~ 259 (437)
T 3gre_A 182 KSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGT-TRGIIDIWDIRFNVLIRSWSFGD-HAP 259 (437)
T ss_dssp CEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEE-TTSCEEEEETTTTEEEEEEBCTT-CEE
T ss_pred CCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEc-CCCeEEEEEcCCccEEEEEecCC-CCc
Confidence 445777888899999999998876654421 123466677776775 55555 45788889988887765543321 112
Q ss_pred eeeEEE----eeCC-eEEEEEcCCeEEEEcCC-CCEEE
Q 006913 274 EYAPVV----DSNG-WISVGSLDGLLYSFSPS-GVLNK 305 (626)
Q Consensus 274 ~sspvv----D~dG-~IWVGT~~gGLy~~d~~-g~~~~ 305 (626)
+.++.. .+++ .|..|+.++.|..+|.. ++...
T Consensus 260 v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~ 297 (437)
T 3gre_A 260 ITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQY 297 (437)
T ss_dssp EEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEE
T ss_pred eEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEE
Confidence 333322 2345 45666677779999975 55443
No 229
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=93.44 E-value=8.7 Score=40.21 Aligned_cols=226 Identities=8% Similarity=-0.036 Sum_probs=113.7
Q ss_pred eeeeEEeeCCEEE-E-Ee-CCcEEEEcC---CCCEEEEEeCCCCCCcccCeEEecCCe-EEEEE-CCeEEEEECCCCccc
Q 006913 39 LSKPLIGEDGKIY-A-CS-EKTLFAFES---NGTIAWSLDLDFTCNIGTAPVHGGTGE-VYIVA-ENRVLKVDLLKIGTS 110 (626)
Q Consensus 39 ~Sspvid~dG~Iw-I-gS-dggL~a~d~---~G~~~W~~~~~~~~~i~~sp~iD~dG~-IwVgT-~ggL~~id~~~~~~~ 110 (626)
...+....+|... + |+ ++.+..++. ++.....+........+.++....+|. |+++. ++.++.++..+....
T Consensus 105 v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~ 184 (450)
T 2vdu_B 105 IRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEE 184 (450)
T ss_dssp EEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCS
T ss_pred eEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccc
Confidence 4555565677653 3 43 566666664 344332221100011234555666766 44555 678988887664311
Q ss_pred cceeEEEecCCCCCCCCCCeeEEEEEEcC---C-eEEEEEcCCeEEEEeCC-CcEEEEECCcccccccccccccCCCCCc
Q 006913 111 ESATQVFYGTGSGKGGTGAIAGIAVSTSS---S-SVYINVKGRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCY 185 (626)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~I~s~~~d~d---G-~LwIgT~~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~ 185 (626)
.... ...... ...+..+....+ + .|..++.++.|..+|.. ++.+..+.. + + ...
T Consensus 185 ~~~~------~~~~~h-~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~-----~------h---~~~ 243 (450)
T 2vdu_B 185 KFTQ------EPILGH-VSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLF-----G------H---KHF 243 (450)
T ss_dssp SCCC------CCSEEC-SSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECC-----C------C---SSC
T ss_pred cccc------eeeecc-cCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeec-----C------C---CCc
Confidence 0000 000011 123444444444 5 46667777788888864 665443200 0 0 011
Q ss_pred cccceEEEcCCCeEEEEcCCCeEEEEeCCCCeEEEEEcCC-----------------------C-CCcceeeeeecCC-e
Q 006913 186 FTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLS-----------------------S-FDKAFTLTPGNNG-Y 240 (626)
Q Consensus 186 i~sspviD~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~-----------------------s-~~~v~sI~~D~dG-~ 240 (626)
+ .++... .+..|+.|+.++.|..+|.++++........ . ...+..+....+| .
T Consensus 244 v-~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~ 321 (450)
T 2vdu_B 244 V-SSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPF 321 (450)
T ss_dssp E-EEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSE
T ss_pred e-EEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCE
Confidence 1 233333 2677888888999999999998765443211 0 0123445555556 4
Q ss_pred EEEEEcCCCEEEEEEC--CCC---cEEEEEecCCCCCceeeEEEeeCCeEEEEEcC
Q 006913 241 LYVTIPVRALVLALDT--SSG---NILWHKSVGPLGSAEYAPVVDSNGWISVGSLD 291 (626)
Q Consensus 241 LwVGT~~gG~l~alD~--~tG---~~~w~~~~~~l~~~~sspvvD~dG~IWVGT~~ 291 (626)
|+++....+.+..++. .++ ......... ..+.++...+ +.+++...+
T Consensus 322 l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~---~~v~~~~~~~-~~~~v~~~~ 373 (450)
T 2vdu_B 322 VAFFVEATKCIIILEMSEKQKGDLALKQIITFP---YNVISLSAHN-DEFQVTLDN 373 (450)
T ss_dssp EEEEETTCSEEEEEEECSSSTTCEEEEEEEECS---SCEEEEEEET-TEEEEEECC
T ss_pred EEEEECCCCeEEEEEeccCCCCceeeccEeccC---CceEEEEecC-CcEEEEEec
Confidence 5565534567777776 444 222222222 2244566664 567776643
No 230
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=93.19 E-value=7.7 Score=38.88 Aligned_cols=175 Identities=9% Similarity=-0.033 Sum_probs=95.0
Q ss_pred CeEEEEEcCCeEEEEeCC-CcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcCCCeEEEEeCCCCeE
Q 006913 140 SSVYINVKGRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYF 218 (626)
Q Consensus 140 G~LwIgT~~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~~GgL~~ld~~tg~~ 218 (626)
..|..|+.++-|..+|.. |+.+..... + . .... .+....+....++.|.+-..++.+..++..+++.
T Consensus 49 ~~l~sg~~Dg~v~iwd~~~~~~~~~~~~-----~-~---v~~~---~~~~~~~s~s~D~~i~~w~~~~~~~~~~~~~~~~ 116 (343)
T 3lrv_A 49 WVCMCRCEDGALHFTQLKDSKTITTITT-----P-N---PRTG---GEHPAIISRGPCNRLLLLYPGNQITILDSKTNKV 116 (343)
T ss_dssp EEEEEEEETTEEEEEEESSSSCEEEEEE-----E-C---CCTT---CCCCSEEEECSTTEEEEEETTTEEEEEETTTCCE
T ss_pred CEEEEECCCCcEEEEECCCCcEEEEEec-----C-C---ceee---eeCCceEEecCCCeEEEEEccCceEEeecCCcce
Confidence 346667777888888864 765544310 0 0 0000 0011122222367777766677777888888764
Q ss_pred EEEEcCCCCCcceeeeeec--CCeEEEEEcCCCEEEEEECCCCcEEEEEecCCCCCceeeEEEeeCCeEE-EEEcCCeEE
Q 006913 219 NWIQDLSSFDKAFTLTPGN--NGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPVVDSNGWIS-VGSLDGLLY 295 (626)
Q Consensus 219 ~w~~~~~s~~~v~sI~~D~--dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~~~sspvvD~dG~IW-VGT~~gGLy 295 (626)
...........+.++.... +|.+.+....++.+..+|..+++......... ...+.++...++|.+. .|+.++.|.
T Consensus 117 ~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~-~~~i~~~~~~pdg~~lasg~~dg~i~ 195 (343)
T 3lrv_A 117 LREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKS-DVEYSSGVLHKDSLLLALYSPDGILD 195 (343)
T ss_dssp EEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCS-SCCCCEEEECTTSCEEEEECTTSCEE
T ss_pred eEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCC-CCceEEEEECCCCCEEEEEcCCCEEE
Confidence 4433322223456666666 67655533345788888988888754432221 1124456677677654 468889999
Q ss_pred EEcCC-CCEE-EEeeccCCCCccccCceEEEEEEecCCcEE
Q 006913 296 SFSPS-GVLN-KFSKSDTSDSVIQSSPYWFHLLGPSIGLKA 334 (626)
Q Consensus 296 ~~d~~-g~~~-~~~~~~~~~~~ilssp~V~~Il~DsdG~Iw 334 (626)
.+|.. ++.. ..... .....|.++....+|...
T Consensus 196 iwd~~~~~~~~~~~~~-------~h~~~v~~l~fs~~g~~l 229 (343)
T 3lrv_A 196 VYNLSSPDQASSRFPV-------DEEAKIKEVKFADNGYWM 229 (343)
T ss_dssp EEESSCTTSCCEECCC-------CTTSCEEEEEECTTSSEE
T ss_pred EEECCCCCCCccEEec-------cCCCCEEEEEEeCCCCEE
Confidence 99964 4432 22220 012335566666666644
No 231
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=93.17 E-value=1.7 Score=46.92 Aligned_cols=147 Identities=16% Similarity=0.201 Sum_probs=78.6
Q ss_pred CeEEecCCeEEEEE-CC-eEEEEECCCCccccceeEEE-ecCCCCC-CCCCCeeEEEEEEc----CCeEEEEEc------
Q 006913 82 APVHGGTGEVYIVA-EN-RVLKVDLLKIGTSESATQVF-YGTGSGK-GGTGAIAGIAVSTS----SSSVYINVK------ 147 (626)
Q Consensus 82 sp~iD~dG~IwVgT-~g-gL~~id~~~~~~~~~~~~~~-~~~~~~~-~~~~~~I~s~~~d~----dG~LwIgT~------ 147 (626)
.+.++.+|+|||+. .+ .|+++++.++.. ..+. +...... ...+...+. ..+. ++.||+...
T Consensus 31 ~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~----~~~~~~~~~~~~~~g~~Gllgi-a~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 31 ALLWGPDNQIWLTERATGKILRVNPESGSV----KTVFQVPEIVNDADGQNGLLGF-AFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp EEEECTTSCEEEEETTTCEEEEECTTTCCE----EEEEECTTCCCCTTSSCSEEEE-EECTTTTTSCEEEEEEEEECTTC
T ss_pred EEEEcCCCcEEEEEcCCCEEEEEECCCCcE----eEEecCCccccccCCCCceeEE-EECCCcCcCCEEEEEEeccccCC
Confidence 56677899999998 44 599998765421 1111 1111000 011223333 3333 789999753
Q ss_pred -------CCeEEEEeCC---CcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcC-------------
Q 006913 148 -------GRALFAFMTH---GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNT------------- 204 (626)
Q Consensus 148 -------~gGL~a~d~~---G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~------------- 204 (626)
...|++++.+ +.+. ....++..++ .. ..+....+++++ +|.|||+..
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~-~~~~i~~~~p------~~--~~H~~~~l~f~p-DG~Lyv~~Gd~~~~~~~~~~~~ 175 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLE-KPVDLLAGLP------SS--KDHQSGRLVIGP-DQKIYYTIGDQGRNQLAYLFLP 175 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEE-EEEEEEEEEC------CC--SSCCEEEEEECT-TSCEEEEECCTTTTSGGGTTSC
T ss_pred CccccccccEEEEEEECCCCCCcC-CcEEEEEcCC------CC--CCCCCCeEeECC-CCeEEEEECCCCCCCccccccc
Confidence 2367777642 2211 0000000111 00 112235577886 899999753
Q ss_pred --------------------CCeEEEEeCCCC------------eEEEEEcCCCCCcceeeeeecCCeEEEEEc
Q 006913 205 --------------------QGELYSLSAHSP------------YFNWIQDLSSFDKAFTLTPGNNGYLYVTIP 246 (626)
Q Consensus 205 --------------------~GgL~~ld~~tg------------~~~w~~~~~s~~~v~sI~~D~dG~LwVGT~ 246 (626)
.|.|+++++++. ..+|.. +......++.|.+|+||++..
T Consensus 176 ~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~---G~RNp~gla~dp~G~L~~~d~ 246 (454)
T 1cru_A 176 NQAQHTPTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTL---GHRNPQGLAFTPNGKLLQSEQ 246 (454)
T ss_dssp CCTTCCCCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEB---CCSEEEEEEECTTSCEEEEEE
T ss_pred cccccccccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEE---CCCCcceEEECCCCCEEEEec
Confidence 256889988764 122322 123455677888899999874
No 232
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=92.97 E-value=0.24 Score=48.83 Aligned_cols=151 Identities=18% Similarity=0.171 Sum_probs=85.6
Q ss_pred EEEEEcCCeEEEEEcCCeEEEEeC-C-CcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcCCCeEEE
Q 006913 133 IAVSTSSSSVYINVKGRALFAFMT-H-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYS 210 (626)
Q Consensus 133 s~~~d~dG~LwIgT~~gGL~a~d~-~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~~GgL~~ 210 (626)
.+....+|.||.. .++.||.+++ + +...|.- . .. +.++. +-+....+..|. +|.||+. .+|.||+
T Consensus 45 ~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~-s-~t----~IG~~----Gw~~F~a~~fD~-~G~LYav-~dG~iyr 111 (236)
T 1tl2_A 45 FLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMG-R-AK----KIGNG----GWNQFQFLFFDP-NGYLYAV-SKDKLYK 111 (236)
T ss_dssp EEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHH-H-CE----EEECS----CGGGCSEEEECT-TSCEEEE-ETTEEEE
T ss_pred eEEECCCccEEEE-eCCeEEEECCCCCCcccccc-c-cc----Eeccc----ccccceEEEECC-CCCEEEe-CCCEEEE
Confidence 3445568999988 5678999986 4 4444531 0 00 00000 001124577896 9999999 5689999
Q ss_pred EeCC-CCeEEEEEcCC-----CCCcceeeeeecCCeEEEEEcCCCEEEEEEC-CCCcEEEEE---ecC-CCCCceeeEEE
Q 006913 211 LSAH-SPYFNWIQDLS-----SFDKAFTLTPGNNGYLYVTIPVRALVLALDT-SSGNILWHK---SVG-PLGSAEYAPVV 279 (626)
Q Consensus 211 ld~~-tg~~~w~~~~~-----s~~~v~sI~~D~dG~LwVGT~~gG~l~alD~-~tG~~~w~~---~~~-~l~~~~sspvv 279 (626)
+++. ++.-.|..+-. +-..+..+..+.+|.||..+ + +.++.-.+ .++...|.. .++ ..-+....++.
T Consensus 112 ~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-d-g~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f 189 (236)
T 1tl2_A 112 ASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-G-QQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFF 189 (236)
T ss_dssp ESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-T-TEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEE
T ss_pred eCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe-C-CcEEecCCCCCCCcccccccceeccCCcceEEEEEE
Confidence 9872 23345643311 11234667888999999988 4 46654332 233233310 011 00123344567
Q ss_pred eeCCeEEEEEcCCeEEEEcC
Q 006913 280 DSNGWISVGSLDGLLYSFSP 299 (626)
Q Consensus 280 D~dG~IWVGT~~gGLy~~d~ 299 (626)
+++|+||..+ ++.||...+
T Consensus 190 ~~~G~l~~v~-~g~~Y~~~~ 208 (236)
T 1tl2_A 190 SSVGTLFGVQ-GGKFYEDYP 208 (236)
T ss_dssp CTTSCEEEEE-TTEEEEESC
T ss_pred CCCCcEEEEe-CCeEEecCC
Confidence 7888888888 677776643
No 233
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=92.81 E-value=8.9 Score=38.62 Aligned_cols=151 Identities=7% Similarity=-0.020 Sum_probs=77.4
Q ss_pred eEEEEEEcCC-eEEEEEcCCeEEEEeCC-CcE--EEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcCCC
Q 006913 131 AGIAVSTSSS-SVYINVKGRALFAFMTH-GQL--LWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQG 206 (626)
Q Consensus 131 I~s~~~d~dG-~LwIgT~~gGL~a~d~~-G~~--~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~~G 206 (626)
|..+....+| .|..++.++.+..++.+ +.. ..... + + ... ..++...+.+..|..|+.++
T Consensus 64 v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~------~------h---~~~-v~~v~~sp~~~~l~s~s~D~ 127 (345)
T 3fm0_A 64 VRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLE------G------H---ENE-VKSVAWAPSGNLLATCSRDK 127 (345)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEEC------C------C---SSC-EEEEEECTTSSEEEEEETTS
T ss_pred EEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEcc------C------C---CCC-ceEEEEeCCCCEEEEEECCC
Confidence 4444444444 46667777777777754 432 11110 0 0 011 13344443244566777788
Q ss_pred eEEEEeCCCCeEE-EEEcCCC-CCcceeeeeecCCe-EEEEEcCCCEEEEEECCCCcEEEEEecCCCCCceeeEEEeeCC
Q 006913 207 ELYSLSAHSPYFN-WIQDLSS-FDKAFTLTPGNNGY-LYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPVVDSNG 283 (626)
Q Consensus 207 gL~~ld~~tg~~~-w~~~~~s-~~~v~sI~~D~dG~-LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~~~sspvvD~dG 283 (626)
.|..+|.+++... ....... ...+.++....+|. |..|+ .++.+..+|..++..........-...+.++..+++|
T Consensus 128 ~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s-~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g 206 (345)
T 3fm0_A 128 SVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASAS-YDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSG 206 (345)
T ss_dssp CEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEE-TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTS
T ss_pred eEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEe-CCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCC
Confidence 8888887765321 1111111 22355555555664 45555 3456666665566433222222111235567777676
Q ss_pred e-EEEEEcCCeEEEEc
Q 006913 284 W-ISVGSLDGLLYSFS 298 (626)
Q Consensus 284 ~-IWVGT~~gGLy~~d 298 (626)
. |..|+.++.|..++
T Consensus 207 ~~l~s~s~D~~v~iW~ 222 (345)
T 3fm0_A 207 QRLASCSDDRTVRIWR 222 (345)
T ss_dssp SEEEEEETTSCEEEEE
T ss_pred CEEEEEeCCCeEEEec
Confidence 4 66677788777776
No 234
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=92.69 E-value=9.9 Score=38.85 Aligned_cols=189 Identities=12% Similarity=0.029 Sum_probs=100.0
Q ss_pred CeEEecCCeE-EEEE---CCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEcCCeEEEEeC-
Q 006913 82 APVHGGTGEV-YIVA---ENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMT- 156 (626)
Q Consensus 82 sp~iD~dG~I-wVgT---~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~~gGL~a~d~- 156 (626)
.+.+..||++ .+++ ++.|...|..++. ....+.. .. .|..+....+|.+.+...++++..++.
T Consensus 138 ~v~fSpDg~~la~as~~~d~~i~iwd~~~~~-----~~~~~~~------~~-~V~~v~fspdg~~l~s~s~~~~~~~~~~ 205 (365)
T 4h5i_A 138 LVYISREGTVAAIASSKVPAIMRIIDPSDLT-----EKFEIET------RG-EVKDLHFSTDGKVVAYITGSSLEVISTV 205 (365)
T ss_dssp EEEECTTSSCEEEEESCSSCEEEEEETTTTE-----EEEEEEC------SS-CCCEEEECTTSSEEEEECSSCEEEEETT
T ss_pred EEEEcCCCCEEEEEECCCCCEEEEeECCCCc-----EEEEeCC------CC-ceEEEEEccCCceEEeccceeEEEEEec
Confidence 3455677875 4555 4567778988763 1222211 11 234444456777666555677888885
Q ss_pred CCcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeE-EEEcCCC----eEEEEeCCCCeEEEE--EcC-CCCC
Q 006913 157 HGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSI-YISNTQG----ELYSLSAHSPYFNWI--QDL-SSFD 228 (626)
Q Consensus 157 ~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~L-wIGT~~G----gL~~ld~~tg~~~w~--~~~-~s~~ 228 (626)
+|+....... .. + ... ..++...+ ++.. ..++.++ -+..++...+..... ... ....
T Consensus 206 ~~~~~~~~~~----~~------~---~~~-v~~v~fsp-dg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 270 (365)
T 4h5i_A 206 TGSCIARKTD----FD------K---NWS-LSKINFIA-DDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFK 270 (365)
T ss_dssp TCCEEEEECC----CC------T---TEE-EEEEEEEE-TTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCS
T ss_pred cCcceeeeec----CC------C---CCC-EEEEEEcC-CCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCC
Confidence 4655433200 00 0 011 23344443 4544 4444333 244455444332211 111 1123
Q ss_pred cceeeeeecCCeEEEEEcCCCEEEEEECCCCcEEEEEecCCCCCceeeEEEeeCCeE-EEEEcCCeEEEEc
Q 006913 229 KAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPVVDSNGWI-SVGSLDGLLYSFS 298 (626)
Q Consensus 229 ~v~sI~~D~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~~~sspvvD~dG~I-WVGT~~gGLy~~d 298 (626)
.+.+++...||++.+....++.+..+|..+++.+.....+- ...+.++...+||.+ .-|+.++.|..++
T Consensus 271 ~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH-~~~V~~v~fSpdg~~laS~S~D~tvrvw~ 340 (365)
T 4h5i_A 271 GITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAH-SFAITEVTISPDSTYVASVSAANTIHIIK 340 (365)
T ss_dssp CEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSS-SSCEEEEEECTTSCEEEEEETTSEEEEEE
T ss_pred CeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcc-cCCEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 46677777888655543345788889999998776542221 123566777778764 4467777777776
No 235
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=92.46 E-value=9.7 Score=38.20 Aligned_cols=108 Identities=11% Similarity=0.110 Sum_probs=59.4
Q ss_pred eEEEcCCCe-EEEEcC-CCeEEEEe--CCCC----e-EEE-----EEcCCCCCcceeeeeecCCe-EEEEEcCCCEEEEE
Q 006913 190 PVIDQCEGS-IYISNT-QGELYSLS--AHSP----Y-FNW-----IQDLSSFDKAFTLTPGNNGY-LYVTIPVRALVLAL 254 (626)
Q Consensus 190 pviD~~dG~-LwIGT~-~GgL~~ld--~~tg----~-~~w-----~~~~~s~~~v~sI~~D~dG~-LwVGT~~gG~l~al 254 (626)
+.+++ +|+ ||++.. ++.+..++ ..++ + +.. ............++.+.||+ ||++....+.+..+
T Consensus 160 ~~~sp-dg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~ 238 (361)
T 3scy_A 160 VRITP-DGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAF 238 (361)
T ss_dssp EEECT-TSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEE
T ss_pred EEECC-CCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEE
Confidence 45665 564 888765 45566664 4443 2 211 11111112344567777885 88887555677777
Q ss_pred ECCCCcEEEEEec--CCC-CCceeeEEEeeCCe-EEEEEcC--CeEEEEc
Q 006913 255 DTSSGNILWHKSV--GPL-GSAEYAPVVDSNGW-ISVGSLD--GLLYSFS 298 (626)
Q Consensus 255 D~~tG~~~w~~~~--~~l-~~~~sspvvD~dG~-IWVGT~~--gGLy~~d 298 (626)
+..+|.+...... .+. ......+.++++|+ ||++..+ +.|..|+
T Consensus 239 ~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~ 288 (361)
T 3scy_A 239 RYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFK 288 (361)
T ss_dssp EEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEE
T ss_pred EecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEE
Confidence 7767765432211 110 11234677887885 7787765 4555554
No 236
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=92.25 E-value=9.9 Score=37.80 Aligned_cols=223 Identities=10% Similarity=0.022 Sum_probs=114.9
Q ss_pred EEeeCCEEEE-Ee-CCcEEEEcC-CCCEEEEEeCCCCCCcccCeEEecCCeEEEE-E-CCeEEEEECCCCccccceeEEE
Q 006913 43 LIGEDGKIYA-CS-EKTLFAFES-NGTIAWSLDLDFTCNIGTAPVHGGTGEVYIV-A-ENRVLKVDLLKIGTSESATQVF 117 (626)
Q Consensus 43 vid~dG~IwI-gS-dggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~dG~IwVg-T-~ggL~~id~~~~~~~~~~~~~~ 117 (626)
....+|...+ |+ ++.+..+|. +++....+.... ..+.++....++.+.+. + ++.|...|..+.. ...
T Consensus 72 ~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~--~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~------~~~ 143 (319)
T 3frx_A 72 TLTADGAYALSASWDKTLRLWDVATGETYQRFVGHK--SDVMSVDIDKKASMIISGSRDKTIKVWTIKGQC------LAT 143 (319)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCS--SCEEEEEECTTSCEEEEEETTSCEEEEETTSCE------EEE
T ss_pred EECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCC--CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCe------EEE
Confidence 3335565444 55 667888887 776544332211 23445556667765554 4 6778888876531 111
Q ss_pred ecCCCCCCCCCCeeEEEEEE-------cCCeEEEEEcCCeEEEEeCC-CcEEEEECCcccccccccccccCCCCCccccc
Q 006913 118 YGTGSGKGGTGAIAGIAVST-------SSSSVYINVKGRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSV 189 (626)
Q Consensus 118 ~~~~~~~~~~~~~I~s~~~d-------~dG~LwIgT~~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~ss 189 (626)
+.. . ...+..+... ....|..++.++-+..+|.. ++....+. + + ...+ .+
T Consensus 144 ~~~-----h-~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~------~------h---~~~v-~~ 201 (319)
T 3frx_A 144 LLG-----H-NDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFI------G------H---NSNI-NT 201 (319)
T ss_dssp ECC-----C-SSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEEC------C------C---CSCE-EE
T ss_pred Eec-----c-CCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeec------C------C---CCcE-EE
Confidence 110 1 1122222111 12246667777778888875 54433320 0 0 0111 33
Q ss_pred eEEEcCCCeEEEEcCCCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCCeEEEEEcCCCEEEEEECCCCcEEEEEecCC
Q 006913 190 PVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGP 269 (626)
Q Consensus 190 pviD~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~ 269 (626)
+...+.+..|..|..++.|..+|..+++....... ...+.+++...+|.+.++... ..+..++..++..........
T Consensus 202 ~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~~v~~~~~sp~~~~la~~~~-~~i~v~~~~~~~~~~~~~~~~ 278 (319)
T 3frx_A 202 LTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSA--QDEVFSLAFSPNRYWLAAATA-TGIKVFSLDPQYLVDDLRPEF 278 (319)
T ss_dssp EEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC--CSCEEEEEECSSSSEEEEEET-TEEEEEEETTEEEEEEECCCC
T ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecC--CCcEEEEEEcCCCCEEEEEcC-CCcEEEEeCcCeeeeccCccc
Confidence 44444234566777788999999999876654332 234566677777765555433 455555544444433322110
Q ss_pred --C----CCceeeEEEeeCCe-EEEEEcCCeEEEEc
Q 006913 270 --L----GSAEYAPVVDSNGW-ISVGSLDGLLYSFS 298 (626)
Q Consensus 270 --l----~~~~sspvvD~dG~-IWVGT~~gGLy~~d 298 (626)
. .....++...++|. |..|+.++.|..++
T Consensus 279 ~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd 314 (319)
T 3frx_A 279 AGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQ 314 (319)
T ss_dssp TTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred cccccCcCcceeEEEECCCCCEEEEeecCceEEEEE
Confidence 0 01133455555654 55566666555554
No 237
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=92.24 E-value=17 Score=40.38 Aligned_cols=65 Identities=12% Similarity=0.063 Sum_probs=41.1
Q ss_pred eeeeEEeeCCEEEEEeCCcEEEEcC-CCCEEEEEeCCCCCCcccCeEEecCCeEE-EEECCeEEEEECCC
Q 006913 39 LSKPLIGEDGKIYACSEKTLFAFES-NGTIAWSLDLDFTCNIGTAPVHGGTGEVY-IVAENRVLKVDLLK 106 (626)
Q Consensus 39 ~Sspvid~dG~IwIgSdggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~dG~Iw-VgT~ggL~~id~~~ 106 (626)
........++.+.++.++.++.+|. +++... ..... .....+....+|+.. .+.++.|+.++..+
T Consensus 84 v~~~~~spd~~~~~~~~~~i~~~d~~~~~~~~-l~~~~--~~~~~~~~SpdG~~la~~~~~~i~v~~~~~ 150 (706)
T 2z3z_A 84 SFRTLDAGRGLVVLFTQGGLVGFDMLARKVTY-LFDTN--EETASLDFSPVGDRVAYVRNHNLYIARGGK 150 (706)
T ss_dssp CEEEEETTTTEEEEEETTEEEEEETTTTEEEE-EECCT--TCCTTCEECTTSSEEEEEETTEEEEEECBC
T ss_pred ceeEEECCCCeEEEEECCEEEEEECCCCceEE-ccCCc--ccccCCcCCCCCCEEEEEECCeEEEEecCc
Confidence 3445555567777777888999998 565432 22111 224466777788643 34488999998876
No 238
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=92.21 E-value=17 Score=40.35 Aligned_cols=99 Identities=18% Similarity=0.046 Sum_probs=52.6
Q ss_pred CeEEEEeCCCCeEEEEEcCC-CCCcceeeeeecCCe-EEEEEcCC----CEEEEEECCCC-cEEEEEe-cC-CCCCceee
Q 006913 206 GELYSLSAHSPYFNWIQDLS-SFDKAFTLTPGNNGY-LYVTIPVR----ALVLALDTSSG-NILWHKS-VG-PLGSAEYA 276 (626)
Q Consensus 206 GgL~~ld~~tg~~~w~~~~~-s~~~v~sI~~D~dG~-LwVGT~~g----G~l~alD~~tG-~~~w~~~-~~-~l~~~~ss 276 (626)
..|+.+|.++++........ ....+..+....||+ |+++..+. ..++.+|..+| ....... .. ........
T Consensus 235 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~ 314 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHP 314 (706)
T ss_dssp EEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSC
T ss_pred eEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCC
Confidence 46888999888765432211 112344555566775 77655332 37888998888 4332221 11 10011233
Q ss_pred EEEee--CCe-EEEEEcCC--eEEEEcCCCCEE
Q 006913 277 PVVDS--NGW-ISVGSLDG--LLYSFSPSGVLN 304 (626)
Q Consensus 277 pvvD~--dG~-IWVGT~~g--GLy~~d~~g~~~ 304 (626)
+...+ +|. +|++..++ .||.++.+++..
T Consensus 315 ~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~ 347 (706)
T 2z3z_A 315 LTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLI 347 (706)
T ss_dssp CEECTTCSSEEEEEECTTSSCEEEEEETTSCEE
T ss_pred ceeecCCCCEEEEEEccCCccEEEEEECCCCEE
Confidence 55655 665 44444433 577777655443
No 239
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=92.16 E-value=2.4 Score=44.50 Aligned_cols=139 Identities=9% Similarity=-0.083 Sum_probs=76.3
Q ss_pred CeEEEEcCCCeEEEEeCCCCeEEEEEcC-CCCCcceeeeee-cCC-eEEEEEcCCCEEEEEECCCCcEEEEEecCCCCCc
Q 006913 197 GSIYISNTQGELYSLSAHSPYFNWIQDL-SSFDKAFTLTPG-NNG-YLYVTIPVRALVLALDTSSGNILWHKSVGPLGSA 273 (626)
Q Consensus 197 G~LwIGT~~GgL~~ld~~tg~~~w~~~~-~s~~~v~sI~~D-~dG-~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~~ 273 (626)
..|..|+.+|.|..+|..++...-.... +....+.++... .++ .|..++ .++.+...|..++..............
T Consensus 133 ~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s-~D~~v~iwd~~~~~~~~~~~~~~~~~~ 211 (435)
T 4e54_B 133 STVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASS-MEGTTRLQDFKGNILRVFASSDTINIW 211 (435)
T ss_dssp TCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEEC-SSSCEEEEETTSCEEEEEECCSSCSCC
T ss_pred CEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEe-CCCEEEEeeccCCceeEEeccCCCCcc
Confidence 4577788888899999877654332222 112345666654 355 455554 456777788766654433322211112
Q ss_pred eeeEEEeeCC-eEEEEEcCCeEEEEcCCCCEEEEeeccCCCCccccCceEEEEEEecCCcEEEEEeeecCee
Q 006913 274 EYAPVVDSNG-WISVGSLDGLLYSFSPSGVLNKFSKSDTSDSVIQSSPYWFHLLGPSIGLKAILCLMVVGQF 344 (626)
Q Consensus 274 ~sspvvD~dG-~IWVGT~~gGLy~~d~~g~~~~~~~~~~~~~~ilssp~V~~Il~DsdG~IwI~T~t~~Ggl 344 (626)
..++...+++ .|..|+.++.|..+|.+++...... .....|.++....++.-++.++...|.+
T Consensus 212 ~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~~~~--------~h~~~v~~v~~~p~~~~~~~s~s~d~~v 275 (435)
T 4e54_B 212 FCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLR--------MHKKKVTHVALNPCCDWFLATASVDQTV 275 (435)
T ss_dssp CCCEEEETTTTEEEEECSSSBEEEEESSSCBCCCSB--------CCSSCEEEEEECTTCSSEEEEEETTSBC
T ss_pred EEEEEECCCCCEEEEEeCCCcEeeeccCcceeEEEe--------cccceEEeeeecCCCceEEEEecCccee
Confidence 3445565555 5667888888999987664332111 1223355666555554334555444444
No 240
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=91.89 E-value=13 Score=38.56 Aligned_cols=101 Identities=11% Similarity=-0.055 Sum_probs=58.9
Q ss_pred CCeEEEEcCCCeEEEEeCCCC---eEEEEEcCCCCCcceeeeeecCCe--EEEEEcCCCEEEEEECCCC-cEEEEEecCC
Q 006913 196 EGSIYISNTQGELYSLSAHSP---YFNWIQDLSSFDKAFTLTPGNNGY--LYVTIPVRALVLALDTSSG-NILWHKSVGP 269 (626)
Q Consensus 196 dG~LwIGT~~GgL~~ld~~tg---~~~w~~~~~s~~~v~sI~~D~dG~--LwVGT~~gG~l~alD~~tG-~~~w~~~~~~ 269 (626)
+..+..+..++.|..+|.+++ +....... ....+.++....++. +.+|. ..+.+..+|..+. .........
T Consensus 244 ~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~-~~~~v~~i~~~p~~~~~l~tg~-~dg~v~vwd~~~~~~~~~~~~~h- 320 (430)
T 2xyi_A 244 ESLFGSVADDQKLMIWDTRNNNTSKPSHTVDA-HTAEVNCLSFNPYSEFILATGS-ADKTVALWDLRNLKLKLHSFESH- 320 (430)
T ss_dssp TTEEEEEETTSEEEEEETTCSCSSSCSEEEEC-CSSCEEEEEECSSCTTEEEEEE-TTSEEEEEETTCTTSCSEEEECC-
T ss_pred CCEEEEEeCCCeEEEEECCCCCCCcceeEeec-CCCCeEEEEeCCCCCCEEEEEe-CCCeEEEEeCCCCCCCeEEeecC-
Confidence 344556777889999999876 22222211 112355666655553 44555 4578888897763 333332221
Q ss_pred CCCceeeEEEeeCC--eEEEEEcCCeEEEEcCC
Q 006913 270 LGSAEYAPVVDSNG--WISVGSLDGLLYSFSPS 300 (626)
Q Consensus 270 l~~~~sspvvD~dG--~IWVGT~~gGLy~~d~~ 300 (626)
...+.++...+++ .+..|+.++.|..+|..
T Consensus 321 -~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~ 352 (430)
T 2xyi_A 321 -KDEIFQVQWSPHNETILASSGTDRRLHVWDLS 352 (430)
T ss_dssp -SSCEEEEEECSSCTTEEEEEETTSCCEEEEGG
T ss_pred -CCCEEEEEECCCCCCEEEEEeCCCcEEEEeCC
Confidence 1234556666666 36667788888888853
No 241
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=91.49 E-value=19 Score=39.52 Aligned_cols=154 Identities=10% Similarity=0.053 Sum_probs=88.8
Q ss_pred eeEEEEEEcCC--eEEEEEcCCeEEEEeCC-CcEEEEECCcccccccccccccCCCCCccccceEEEcCCCe-EEEEcCC
Q 006913 130 IAGIAVSTSSS--SVYINVKGRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGS-IYISNTQ 205 (626)
Q Consensus 130 ~I~s~~~d~dG--~LwIgT~~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~-LwIGT~~ 205 (626)
.+..+....++ .|..++.++-+..+|.. ++....+.. + ... ..+....+ +|. |..|..+
T Consensus 149 ~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~------------H---~~~-V~~v~fsp-dg~~las~s~D 211 (611)
T 1nr0_A 149 AMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGE------------H---TKF-VHSVRYNP-DGSLFASTGGD 211 (611)
T ss_dssp CEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECC------------C---SSC-EEEEEECT-TSSEEEEEETT
T ss_pred CceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeecc------------c---cCc-eEEEEECC-CCCEEEEEECC
Confidence 34444444444 46677778888888864 544333200 0 011 23344554 454 5567778
Q ss_pred CeEEEEeCCCCeEEEEEcC------CCCCcceeeeeecCCeEEEEEcCCCEEEEEECCCCcEEEEEecCC-CCCceeeEE
Q 006913 206 GELYSLSAHSPYFNWIQDL------SSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGP-LGSAEYAPV 278 (626)
Q Consensus 206 GgL~~ld~~tg~~~w~~~~------~s~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~-l~~~~sspv 278 (626)
+.|..+|..+++....... .....+.++....+|...+....++.+...|..+++.......+. .........
T Consensus 212 ~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~ 291 (611)
T 1nr0_A 212 GTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGII 291 (611)
T ss_dssp SCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEE
T ss_pred CcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEE
Confidence 8899999888766543211 112346677777788655443345788888988887765544331 001122233
Q ss_pred EeeCCeEEEEEcCCeEEEEcCCC
Q 006913 279 VDSNGWISVGSLDGLLYSFSPSG 301 (626)
Q Consensus 279 vD~dG~IWVGT~~gGLy~~d~~g 301 (626)
.+ ...+..++.++.+..++...
T Consensus 292 ~~-~~~l~s~s~d~~i~~~~~~~ 313 (611)
T 1nr0_A 292 WT-KQALVSISANGFINFVNPEL 313 (611)
T ss_dssp EC-SSCEEEEETTCCEEEEETTT
T ss_pred Ec-CCEEEEEeCCCcEEEEeCCC
Confidence 33 56777788888888888753
No 242
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=91.39 E-value=7.3 Score=41.74 Aligned_cols=113 Identities=13% Similarity=0.004 Sum_probs=74.7
Q ss_pred cCCeEEEEEcC-----CeEEEEeCC-CcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcC-------
Q 006913 138 SSSSVYINVKG-----RALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNT------- 204 (626)
Q Consensus 138 ~dG~LwIgT~~-----gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~------- 204 (626)
....+|+.... +.|..+|+. ++.+..+. .+ . .. .+.+.+.+..||+++.
T Consensus 83 ~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~-----vG------~------~P-gia~SpDgk~lyVan~~~~~~~~ 144 (426)
T 3c75_H 83 DARRVYIQDPAHFAAITQQFVIDGSTGRILGMTD-----GG------F------LP-HPVAAEDGSFFAQASTVFERIAR 144 (426)
T ss_dssp CTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEE-----EC------S------SC-EEEECTTSSCEEEEEEEEEETTE
T ss_pred CCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEE-----CC------C------CC-ceEECCCCCEEEEEecccccccc
Confidence 44678888653 479999975 88777641 11 0 01 2455543567999873
Q ss_pred ---CCeEEEEeCCCCeEEEEEcCC-C-----CCcceeeeeecCC-eEEEEEcC-CCEEEEEECCCCcEEEEEecC
Q 006913 205 ---QGELYSLSAHSPYFNWIQDLS-S-----FDKAFTLTPGNNG-YLYVTIPV-RALVLALDTSSGNILWHKSVG 268 (626)
Q Consensus 205 ---~GgL~~ld~~tg~~~w~~~~~-s-----~~~v~sI~~D~dG-~LwVGT~~-gG~l~alD~~tG~~~w~~~~~ 268 (626)
++.|..||..++++......+ . ......++.+.|| +|||+... .+.+..+|..++++......+
T Consensus 145 G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~ 219 (426)
T 3c75_H 145 GKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVP 219 (426)
T ss_dssp EEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC
T ss_pred CCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcC
Confidence 457999999998876554432 0 1123345667777 79998743 468899999999988766654
No 243
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=91.37 E-value=15 Score=38.15 Aligned_cols=156 Identities=7% Similarity=-0.003 Sum_probs=74.6
Q ss_pred ccCeEEecCCe--EEEEE-CCeEEEEECCCCcccccee--EEEecCCCCCCCCCCeeEEEEEEc-CCe-EEEEEcCCeEE
Q 006913 80 GTAPVHGGTGE--VYIVA-ENRVLKVDLLKIGTSESAT--QVFYGTGSGKGGTGAIAGIAVSTS-SSS-VYINVKGRALF 152 (626)
Q Consensus 80 ~~sp~iD~dG~--IwVgT-~ggL~~id~~~~~~~~~~~--~~~~~~~~~~~~~~~~I~s~~~d~-dG~-LwIgT~~gGL~ 152 (626)
+.++....++. |..+. ++.|..++........... ...+. .. ...+..+.... ++. +..++.++.|.
T Consensus 184 v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~-----~h-~~~v~~v~~~p~~~~~l~s~~~dg~i~ 257 (430)
T 2xyi_A 184 GYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFT-----GH-TAVVEDVAWHLLHESLFGSVADDQKLM 257 (430)
T ss_dssp CCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEEC-----CC-SSCEEEEEECSSCTTEEEEEETTSEEE
T ss_pred eEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeec-----CC-CCCEeeeEEeCCCCCEEEEEeCCCeEE
Confidence 34555555554 44455 6788888887632100000 00110 11 12344433333 444 44566778888
Q ss_pred EEeCC-C---cEEEEECCcccccccccccccCCCCCccccceEEEcCCC-eEEEEcCCCeEEEEeCCCC-eEEEEEcCCC
Q 006913 153 AFMTH-G---QLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEG-SIYISNTQGELYSLSAHSP-YFNWIQDLSS 226 (626)
Q Consensus 153 a~d~~-G---~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG-~LwIGT~~GgL~~ld~~tg-~~~w~~~~~s 226 (626)
.+|.. + +...... . + ... ..++...+.+. .+..|..+|.|..+|.++. ........ .
T Consensus 258 i~d~~~~~~~~~~~~~~------~------~---~~~-v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~-h 320 (430)
T 2xyi_A 258 IWDTRNNNTSKPSHTVD------A------H---TAE-VNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFES-H 320 (430)
T ss_dssp EEETTCSCSSSCSEEEE------C------C---SSC-EEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEC-C
T ss_pred EEECCCCCCCcceeEee------c------C---CCC-eEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeec-C
Confidence 88864 3 2322210 0 0 011 13344443123 3567878889999998873 22221111 1
Q ss_pred CCcceeeeeecCC-eEEEEEcCCCEEEEEECCC
Q 006913 227 FDKAFTLTPGNNG-YLYVTIPVRALVLALDTSS 258 (626)
Q Consensus 227 ~~~v~sI~~D~dG-~LwVGT~~gG~l~alD~~t 258 (626)
...+.++....+| .+++.....+.+..+|..+
T Consensus 321 ~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 321 KDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp SSCEEEEEECSSCTTEEEEEETTSCCEEEEGGG
T ss_pred CCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCC
Confidence 2235566665556 3444332345666666544
No 244
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=91.32 E-value=11 Score=42.89 Aligned_cols=102 Identities=9% Similarity=0.020 Sum_probs=59.9
Q ss_pred CCeEEEEcCCCeEEEEeCCCCeEEEEEcCC-CCCcceeeeeecC--C-eEEEEEcCCCEEEEEECCCCcEE--EEEecCC
Q 006913 196 EGSIYISNTQGELYSLSAHSPYFNWIQDLS-SFDKAFTLTPGNN--G-YLYVTIPVRALVLALDTSSGNIL--WHKSVGP 269 (626)
Q Consensus 196 dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~-s~~~v~sI~~D~d--G-~LwVGT~~gG~l~alD~~tG~~~--w~~~~~~ 269 (626)
+..|..|+.+|.|..+|.++++..-..... ....+.++....+ | .+.+|+ .++.+..+|..++... ......
T Consensus 67 ~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs-~dg~I~vwdl~~~~~~~~~~~~~~- 144 (753)
T 3jro_A 67 GTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVAS-SDGKVSVVEFKENGTTSPIIIDAH- 144 (753)
T ss_dssp CSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEE-TTSEEEEEECCSSSCCCCEEEECC-
T ss_pred CCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEe-CCCcEEEEEeecCCCcceeEeecC-
Confidence 345777888888999999887532222211 1234556655544 5 455555 5678888887766321 111111
Q ss_pred CCCceeeEEEee--------------CCeEEEEEcCCeEEEEcCC
Q 006913 270 LGSAEYAPVVDS--------------NGWISVGSLDGLLYSFSPS 300 (626)
Q Consensus 270 l~~~~sspvvD~--------------dG~IWVGT~~gGLy~~d~~ 300 (626)
...+.++...+ ...+.+|+.++.|..+|..
T Consensus 145 -~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~ 188 (753)
T 3jro_A 145 -AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYN 188 (753)
T ss_dssp -SSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEE
T ss_pred -CCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEecc
Confidence 11233444443 4568888989989988853
No 245
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=91.07 E-value=21 Score=39.20 Aligned_cols=225 Identities=9% Similarity=0.017 Sum_probs=123.4
Q ss_pred EEEEe-CCcEEEEcC-CCCEEEEEeCCCCCCcccCeEEecCCeEEEE-E-CCeEEEEECCCCccccceeEEEecCCC-C-
Q 006913 50 IYACS-EKTLFAFES-NGTIAWSLDLDFTCNIGTAPVHGGTGEVYIV-A-ENRVLKVDLLKIGTSESATQVFYGTGS-G- 123 (626)
Q Consensus 50 IwIgS-dggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~dG~IwVg-T-~ggL~~id~~~~~~~~~~~~~~~~~~~-~- 123 (626)
|..|+ ++.+..+|. +++....+. .. ...+.++....+|.+.+. . ++.|...|..++.. ...+.... .
T Consensus 163 l~s~s~D~~v~lwd~~~~~~~~~l~-~H-~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~-----~~~~~~~~~~~ 235 (611)
T 1nr0_A 163 IISGSDDNTVAIFEGPPFKFKSTFG-EH-TKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTK-----TGVFEDDSLKN 235 (611)
T ss_dssp EEEEETTSCEEEEETTTBEEEEEEC-CC-SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE-----EEECBCTTSSS
T ss_pred EEEEeCCCeEEEEECCCCeEeeeec-cc-cCceEEEEECCCCCEEEEEECCCcEEEEECCCCcE-----eeeeccccccc
Confidence 44455 556777776 554433222 11 123445666678886664 3 78888889776531 11111100 0
Q ss_pred CCCCCCeeEEEEEEcCCe-EEEEEcCCeEEEEeCC-CcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEE
Q 006913 124 KGGTGAIAGIAVSTSSSS-VYINVKGRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYI 201 (626)
Q Consensus 124 ~~~~~~~I~s~~~d~dG~-LwIgT~~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwI 201 (626)
....+ .|..+....+|. |..++.++-+..+|.. ++....+.. + ... ... ......+ +..+..
T Consensus 236 ~~h~~-~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~-----~------~~~-~~~-~~~~~~~--~~~l~s 299 (611)
T 1nr0_A 236 VAHSG-SVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPV-----G------TRI-EDQ-QLGIIWT--KQALVS 299 (611)
T ss_dssp CSSSS-CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC-----C------SSG-GGC-EEEEEEC--SSCEEE
T ss_pred cccCC-CEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecC-----C------CCc-cce-eEEEEEc--CCEEEE
Confidence 01222 344444445554 5566777778888975 665443200 0 000 000 1112223 566777
Q ss_pred EcCCCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCCe-EEEEEcCCCEEEEEECCCCcEEEEEecCCCCCceeeEEEe
Q 006913 202 SNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGY-LYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPVVD 280 (626)
Q Consensus 202 GT~~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG~-LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~~~sspvvD 280 (626)
+..++.+..+|..++....... +....+.+++...||. |..++ .++.+...|..++.......... ...+.++...
T Consensus 300 ~s~d~~i~~~~~~~~~~~~~~~-gh~~~v~~l~~spdg~~l~s~s-~D~~v~~Wd~~~~~~~~~~~~~h-~~~v~~~~~s 376 (611)
T 1nr0_A 300 ISANGFINFVNPELGSIDQVRY-GHNKAITALSSSADGKTLFSAD-AEGHINSWDISTGISNRVFPDVH-ATMITGIKTT 376 (611)
T ss_dssp EETTCCEEEEETTTTEEEEEEC-CCSSCEEEEEECTTSSEEEEEE-TTSCEEEEETTTCCEEECSSCSC-SSCEEEEEEC
T ss_pred EeCCCcEEEEeCCCCCcceEEc-CCCCCEEEEEEeCCCCEEEEEe-CCCcEEEEECCCCceeeecccCC-cceEEEEEEC
Confidence 7788889999988876433221 1223466777777775 55555 45678888988887643221111 1234445555
Q ss_pred eCCeEEEEEcCCeEEEEcCC
Q 006913 281 SNGWISVGSLDGLLYSFSPS 300 (626)
Q Consensus 281 ~dG~IWVGT~~gGLy~~d~~ 300 (626)
+++.+..++.++.+..++..
T Consensus 377 ~~~~l~s~s~d~~v~~w~~~ 396 (611)
T 1nr0_A 377 SKGDLFTVSWDDHLKVVPAG 396 (611)
T ss_dssp TTSCEEEEETTTEEEEECSS
T ss_pred CCCcEEEEEcCCceEEeecC
Confidence 67888888888888888754
No 246
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=90.52 E-value=15 Score=36.68 Aligned_cols=192 Identities=11% Similarity=-0.021 Sum_probs=101.7
Q ss_pred ccCeEEecCCeEEEE-E-CCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEcC-CeEEEEEcCCeEEEEeC
Q 006913 80 GTAPVHGGTGEVYIV-A-ENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSS-SSVYINVKGRALFAFMT 156 (626)
Q Consensus 80 ~~sp~iD~dG~IwVg-T-~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~d-G~LwIgT~~gGL~a~d~ 156 (626)
+.++....++.+.+. . ++.|...|..++.. ...+. .... .+..+....+ ..|..++.++.+..+|.
T Consensus 79 V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~-----~~~~~-----~h~~-~v~~v~~sp~~~~l~s~~~d~~i~~wd~ 147 (343)
T 2xzm_R 79 VSDLALSQENCFAISSSWDKTLRLWDLRTGTT-----YKRFV-----GHQS-EVYSVAFSPDNRQILSAGAEREIKLWNI 147 (343)
T ss_dssp EEEEEECSSTTEEEEEETTSEEEEEETTSSCE-----EEEEE-----CCCS-CEEEEEECSSTTEEEEEETTSCEEEEES
T ss_pred eEEEEECCCCCEEEEEcCCCcEEEEECCCCcE-----EEEEc-----CCCC-cEEEEEECCCCCEEEEEcCCCEEEEEec
Confidence 444555667765554 4 78888889877531 11111 1112 3344433344 45677777888888887
Q ss_pred CCcEEEEECCcccccccccccccCCCCCccccceEEEc----------CCCeEEEEcCCCeEEEEeCCCCeEEEEEcCCC
Q 006913 157 HGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQ----------CEGSIYISNTQGELYSLSAHSPYFNWIQDLSS 226 (626)
Q Consensus 157 ~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~----------~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s 226 (626)
.+........ .. .+ ...+ .+....+ ....+..+..++.|..+|.+. +...... ..
T Consensus 148 ~~~~~~~~~~-------~~--~~---~~~v-~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~-~h 212 (343)
T 2xzm_R 148 LGECKFSSAE-------KE--NH---SDWV-SCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNF-QIRYTFK-AH 212 (343)
T ss_dssp SSCEEEECCT-------TT--SC---SSCE-EEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTT-EEEEEEE-CC
T ss_pred cCCceeeeec-------cc--CC---Ccee-eeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCC-ceeEEEc-Cc
Confidence 6544332100 00 00 0011 1122211 013567777888899998554 4333221 11
Q ss_pred CCcceeeeeecCCeEEEEEcCCCEEEEEECCC-CcEEEEEecCCCCCceeeEEEeeCCeEEEEEcCCeEEEEcCC
Q 006913 227 FDKAFTLTPGNNGYLYVTIPVRALVLALDTSS-GNILWHKSVGPLGSAEYAPVVDSNGWISVGSLDGLLYSFSPS 300 (626)
Q Consensus 227 ~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~t-G~~~w~~~~~~l~~~~sspvvD~dG~IWVGT~~gGLy~~d~~ 300 (626)
...+.++....+|...+....++.+...|..+ +........+ ..+..+...+++.+..++.++++..++..
T Consensus 213 ~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~---~~v~~v~~sp~~~~la~~~d~~v~iw~~~ 284 (343)
T 2xzm_R 213 ESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFDAG---STINQIAFNPKLQWVAVGTDQGVKIFNLM 284 (343)
T ss_dssp SSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEECS---SCEEEEEECSSSCEEEEEESSCEEEEESS
T ss_pred cccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceeecCC---CcEEEEEECCCCCEEEEECCCCEEEEEeC
Confidence 23456677777775444333457888788633 2222222222 23455677777877666667889988853
No 247
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=90.52 E-value=16 Score=36.98 Aligned_cols=136 Identities=13% Similarity=0.074 Sum_probs=70.0
Q ss_pred eEEEcCCC-eEEEEcCCCeEEEEeCC-CCeEEEEEcCCCCCcceeeeeecCCe-EEEEEc--------------CCCEEE
Q 006913 190 PVIDQCEG-SIYISNTQGELYSLSAH-SPYFNWIQDLSSFDKAFTLTPGNNGY-LYVTIP--------------VRALVL 252 (626)
Q Consensus 190 pviD~~dG-~LwIGT~~GgL~~ld~~-tg~~~w~~~~~s~~~v~sI~~D~dG~-LwVGT~--------------~gG~l~ 252 (626)
+.+++ +| .||+++.+ .+..++.+ +|+...............+..+.||+ ||+.+. .++.+.
T Consensus 45 ~a~sp-dg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~ 122 (365)
T 1jof_A 45 MTFDH-ERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGN 122 (365)
T ss_dssp EEECT-TSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEE
T ss_pred EEECC-CCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEE
Confidence 45565 55 48888766 78888876 66664332211101233455677887 344221 234555
Q ss_pred EEECC-CCcEEEEEec---CCCCCceeeEEEeeCCe-EEEEEc-CCeEEEEcC--CCCEEEEeeccCCCCccccCceEEE
Q 006913 253 ALDTS-SGNILWHKSV---GPLGSAEYAPVVDSNGW-ISVGSL-DGLLYSFSP--SGVLNKFSKSDTSDSVIQSSPYWFH 324 (626)
Q Consensus 253 alD~~-tG~~~w~~~~---~~l~~~~sspvvD~dG~-IWVGT~-~gGLy~~d~--~g~~~~~~~~~~~~~~ilssp~V~~ 324 (626)
.++.. +|+....... .. ......+..+++|. +|++.. ++.|+.++. +|+........... ....+++
T Consensus 123 v~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~----~g~~p~~ 197 (365)
T 1jof_A 123 VFSVSETGKLEKNVQNYEYQE-NTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPD----PGDHPRW 197 (365)
T ss_dssp EEEECTTCCEEEEEEEEECCT-TCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSS----TTCCEEE
T ss_pred EEccCCCCcCcceEeeEEeCC-CCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCC----CCCCCCE
Confidence 55543 4655422211 11 12345677888885 777664 467888875 35543322110000 0223456
Q ss_pred EEEecCCc
Q 006913 325 LLGPSIGL 332 (626)
Q Consensus 325 Il~DsdG~ 332 (626)
+..+.+|.
T Consensus 198 ~~~spdg~ 205 (365)
T 1jof_A 198 VAMHPTGN 205 (365)
T ss_dssp EEECTTSS
T ss_pred eEECCCCC
Confidence 77777885
No 248
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=90.21 E-value=18 Score=37.01 Aligned_cols=164 Identities=9% Similarity=0.038 Sum_probs=87.1
Q ss_pred EEEEEEcCCeEEEEEcCCeEEEEeCC-CcEEEEE-CCcccccccccccccCCCCCccccceEEEcCC-CeEEEEcCCCeE
Q 006913 132 GIAVSTSSSSVYINVKGRALFAFMTH-GQLLWSA-GPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCE-GSIYISNTQGEL 208 (626)
Q Consensus 132 ~s~~~d~dG~LwIgT~~gGL~a~d~~-G~~~w~~-~~~~~~~~~~~~~~~~l~~~~i~sspviD~~d-G~LwIGT~~GgL 208 (626)
..+....++.+++...++.|..+|.. +...+.. ......+ . .+ ... ..++...+.+ ..|..|+.+|.|
T Consensus 181 ~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~--~---~~---~~~-v~~~~~~p~~~~~l~s~~~dg~i 251 (447)
T 3dw8_B 181 NSISINSDYETYLSADDLRINLWHLEITDRSFNIVDIKPANM--E---EL---TEV-ITAAEFHPNSCNTFVYSSSKGTI 251 (447)
T ss_dssp CEEEECTTSSEEEEECSSEEEEEETTEEEEEEEEEECCCSSG--G---GC---CCC-EEEEEECSSCTTEEEEEETTSCE
T ss_pred EEEEEcCCCCEEEEeCCCeEEEEECCCCCceeeeeecccccc--c---cc---Ccc-eEEEEECCCCCcEEEEEeCCCeE
Confidence 33334456665554467778888875 4333321 0000000 0 00 111 2334455423 467788888889
Q ss_pred EEEeCCCCeE----EEEEcCCCC-----------CcceeeeeecCCeEEEEEcCCCEEEEEECCC-CcEEEEEecCC-CC
Q 006913 209 YSLSAHSPYF----NWIQDLSSF-----------DKAFTLTPGNNGYLYVTIPVRALVLALDTSS-GNILWHKSVGP-LG 271 (626)
Q Consensus 209 ~~ld~~tg~~----~w~~~~~s~-----------~~v~sI~~D~dG~LwVGT~~gG~l~alD~~t-G~~~w~~~~~~-l~ 271 (626)
..+|.++++. ......... ..+.++....+|.+.+.... +.+..+|..+ +.......... ..
T Consensus 252 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~ 330 (447)
T 3dw8_B 252 RLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLR 330 (447)
T ss_dssp EEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGT
T ss_pred EEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeecccccc
Confidence 9999988764 222111110 14666777778866655545 7888888775 55433222110 00
Q ss_pred C---------c---eeeEEEeeCC-eEEEEEcCCeEEEEcCC-CCEEE
Q 006913 272 S---------A---EYAPVVDSNG-WISVGSLDGLLYSFSPS-GVLNK 305 (626)
Q Consensus 272 ~---------~---~sspvvD~dG-~IWVGT~~gGLy~~d~~-g~~~~ 305 (626)
. . ...+...++| .|..|+.++.|+.+|.. ++...
T Consensus 331 ~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~ 378 (447)
T 3dw8_B 331 SKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDIT 378 (447)
T ss_dssp TTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEE
T ss_pred ccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCccee
Confidence 0 0 1124555565 47778888999999975 55443
No 249
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=90.04 E-value=14 Score=35.59 Aligned_cols=206 Identities=8% Similarity=-0.032 Sum_probs=93.2
Q ss_pred eeeEEeeCCE-EEEEe-CCcEEEEcC-CCC----EEEEEeCCCCCCcccCeEEec--CCeE-EEEE-CCeEEEEECCCCc
Q 006913 40 SKPLIGEDGK-IYACS-EKTLFAFES-NGT----IAWSLDLDFTCNIGTAPVHGG--TGEV-YIVA-ENRVLKVDLLKIG 108 (626)
Q Consensus 40 Sspvid~dG~-IwIgS-dggL~a~d~-~G~----~~W~~~~~~~~~i~~sp~iD~--dG~I-wVgT-~ggL~~id~~~~~ 108 (626)
.......+|. |..|+ ++.+..+|. ++. ....+.. . ...+.++.... ++.+ ..++ ++.|..+|..++.
T Consensus 15 ~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~-~-~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~ 92 (351)
T 3f3f_A 15 HDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRA-H-DSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQ 92 (351)
T ss_dssp EEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEEC-C-SSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTS
T ss_pred eEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceecc-C-CCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCc
Confidence 3444445665 44455 556777775 332 2211111 1 12233444443 3554 4455 6778888876642
Q ss_pred cccc----eeEEEecCCCCCCCCCCeeEEEEEEc---CCeEEEEEcCCeEEEEeCC-CcEE--EEECCcccccccccccc
Q 006913 109 TSES----ATQVFYGTGSGKGGTGAIAGIAVSTS---SSSVYINVKGRALFAFMTH-GQLL--WSAGPVLDQLGYRQGCT 178 (626)
Q Consensus 109 ~~~~----~~~~~~~~~~~~~~~~~~I~s~~~d~---dG~LwIgT~~gGL~a~d~~-G~~~--w~~~~~~~~~~~~~~~~ 178 (626)
.... .....+. .... .+..+.... +..|..++.++.|..+|.. ++.. +............ .
T Consensus 93 ~~~~~~~~~~~~~~~-----~~~~-~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~---~ 163 (351)
T 3f3f_A 93 EECSGRRWNKLCTLN-----DSKG-SLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIP---P 163 (351)
T ss_dssp CTTSSCSEEEEEEEC-----CCSS-CEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCC---C
T ss_pred ccccccCcceeeeec-----ccCC-ceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccc---c
Confidence 1000 0011111 1112 333333333 4457777888889899853 4321 1110000000000 0
Q ss_pred cCCCCCccccceEEEcC---CCeEEEEcCCCeEEEEeCCCCeEEEEEcCCC-CCcceeeeeecCC----e-EEEEEcCCC
Q 006913 179 KTDVDCYFTSVPVIDQC---EGSIYISNTQGELYSLSAHSPYFNWIQDLSS-FDKAFTLTPGNNG----Y-LYVTIPVRA 249 (626)
Q Consensus 179 ~~l~~~~i~sspviD~~---dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s-~~~v~sI~~D~dG----~-LwVGT~~gG 249 (626)
... ... ..++...+. +..+.+++.++.+...+...+.......... ...+.++....+| . |..+. .++
T Consensus 164 ~~~-~~~-~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~-~dg 240 (351)
T 3f3f_A 164 ANH-LQS-DFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGC-KDG 240 (351)
T ss_dssp SSC-SCC-CEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEE-TTS
T ss_pred CCc-ccc-eeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEc-CCC
Confidence 000 001 112222211 4567778778777766666666543333222 2345666666665 4 44444 445
Q ss_pred EEEEEECCCC
Q 006913 250 LVLALDTSSG 259 (626)
Q Consensus 250 ~l~alD~~tG 259 (626)
.+..+|..++
T Consensus 241 ~i~iwd~~~~ 250 (351)
T 3f3f_A 241 RIRIFKITEK 250 (351)
T ss_dssp CEEEEEEEEC
T ss_pred eEEEEeCCCC
Confidence 6666665444
No 250
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=88.63 E-value=23 Score=36.14 Aligned_cols=167 Identities=8% Similarity=-0.082 Sum_probs=82.3
Q ss_pred ccCeEEecCCeEEEEE-CCeEEEEECCCCccccceeEEE-ecCCC--CCCCCCCeeEEEEEEcCC--eEEEEEcCCeEEE
Q 006913 80 GTAPVHGGTGEVYIVA-ENRVLKVDLLKIGTSESATQVF-YGTGS--GKGGTGAIAGIAVSTSSS--SVYINVKGRALFA 153 (626)
Q Consensus 80 ~~sp~iD~dG~IwVgT-~ggL~~id~~~~~~~~~~~~~~-~~~~~--~~~~~~~~I~s~~~d~dG--~LwIgT~~gGL~a 153 (626)
+.++....+|++.+.. ++.|..+|..... ..+. +...+ .... ...+..+....++ .|..++.++.|..
T Consensus 180 v~~~~~~~~~~~l~s~~d~~i~iwd~~~~~-----~~~~~~~~~~~~~~~~-~~~v~~~~~~p~~~~~l~s~~~dg~i~i 253 (447)
T 3dw8_B 180 INSISINSDYETYLSADDLRINLWHLEITD-----RSFNIVDIKPANMEEL-TEVITAAEFHPNSCNTFVYSSSKGTIRL 253 (447)
T ss_dssp CCEEEECTTSSEEEEECSSEEEEEETTEEE-----EEEEEEECCCSSGGGC-CCCEEEEEECSSCTTEEEEEETTSCEEE
T ss_pred eEEEEEcCCCCEEEEeCCCeEEEEECCCCC-----ceeeeeeccccccccc-CcceEEEEECCCCCcEEEEEeCCCeEEE
Confidence 3445556677766655 6788888887321 1111 10000 0111 2234444444444 5777788888889
Q ss_pred EeCC-CcE----EEEECCcccccccccccccCCC-----CCccccceEEEcCCCe-EEEEcCCCeEEEEeCCC-CeEEEE
Q 006913 154 FMTH-GQL----LWSAGPVLDQLGYRQGCTKTDV-----DCYFTSVPVIDQCEGS-IYISNTQGELYSLSAHS-PYFNWI 221 (626)
Q Consensus 154 ~d~~-G~~----~w~~~~~~~~~~~~~~~~~~l~-----~~~i~sspviD~~dG~-LwIGT~~GgL~~ld~~t-g~~~w~ 221 (626)
+|.. ++. ...+.. ... ..... ... ..++...+ ++. |..++. +.|..+|.++ ++....
T Consensus 254 wd~~~~~~~~~~~~~~~~-------~~~-~~~~~~~~~~~~~-v~~~~~s~-~g~~l~~~~~-~~v~iwd~~~~~~~~~~ 322 (447)
T 3dw8_B 254 CDMRASALCDRHSKLFEE-------PED-PSNRSFFSEIISS-ISDVKFSH-SGRYMMTRDY-LSVKVWDLNMENRPVET 322 (447)
T ss_dssp EETTTCSSSCTTCEEECC-------C------CCHHHHHTTC-EEEEEECT-TSSEEEEEES-SEEEEEETTCCSSCSCC
T ss_pred EECcCCccccceeeEecc-------CCC-ccccccccccCce-EEEEEECC-CCCEEEEeeC-CeEEEEeCCCCccccce
Confidence 9964 543 222210 000 00000 001 13344554 444 555655 8899999876 443221
Q ss_pred EcCCC--C---------Cc---ceeeeeecCCeEEEEEcCCCEEEEEECCCCcEEE
Q 006913 222 QDLSS--F---------DK---AFTLTPGNNGYLYVTIPVRALVLALDTSSGNILW 263 (626)
Q Consensus 222 ~~~~s--~---------~~---v~sI~~D~dG~LwVGT~~gG~l~alD~~tG~~~w 263 (626)
..... . +. +..+....+|...+....++.+..+|..+++...
T Consensus 323 ~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~ 378 (447)
T 3dw8_B 323 YQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDIT 378 (447)
T ss_dssp EESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEE
T ss_pred eeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCccee
Confidence 11100 0 00 1124555667544443356789899998888764
No 251
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=88.38 E-value=19 Score=34.72 Aligned_cols=260 Identities=8% Similarity=-0.039 Sum_probs=130.4
Q ss_pred CCEEEEEeCCcEEEEcC-CCCEEEEEeCCCCCCcccCeEEecCCeEEE-EE-CCeEEEEECCCCccccceeEEEecCCCC
Q 006913 47 DGKIYACSEKTLFAFES-NGTIAWSLDLDFTCNIGTAPVHGGTGEVYI-VA-ENRVLKVDLLKIGTSESATQVFYGTGSG 123 (626)
Q Consensus 47 dG~IwIgSdggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~dG~IwV-gT-~ggL~~id~~~~~~~~~~~~~~~~~~~~ 123 (626)
++.|-+|.++.+..+|. +|+....+........+.++....+|+..+ |+ ++.|...+..+++. ...+..
T Consensus 36 ~~~lAvg~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~-----~~~~~~--- 107 (318)
T 4ggc_A 36 GNVLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKR-----LRNMTS--- 107 (318)
T ss_dssp TSEEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE-----EEEEEC---
T ss_pred CCEEEEEeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCcee-----EEEecC---
Confidence 45444566888999998 888765444332222345666677777555 45 77888889887631 111111
Q ss_pred CCCCCCeeEEEEEEcCCeEEEEEcCCeEEEEeCC-C-cEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEE
Q 006913 124 KGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTH-G-QLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYI 201 (626)
Q Consensus 124 ~~~~~~~I~s~~~d~dG~LwIgT~~gGL~a~d~~-G-~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwI 201 (626)
... .+.. .......+..++.++.+...+.. + ....... + +. .. .........+..|..
T Consensus 108 --h~~-~~~~-~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~------~------~~---~~-~~~~~~~~~~~~l~s 167 (318)
T 4ggc_A 108 --HSA-RVGS-LSWNSYILSSGSRSGHIHHHDVRVAEHHVATLS------G------HS---QE-VCGLRWAPDGRHLAS 167 (318)
T ss_dssp --CSS-CEEE-EEEETTEEEEEETTSEEEEEETTSSSCEEEEEE------C------CS---SC-EEEEEECTTSSEEEE
T ss_pred --ccc-eEEE-eecCCCEEEEEecCCceEeeecCCCceeEEEEc------C------cc---Cc-eEEEEEcCCCCEEEE
Confidence 111 1222 22234456666665555555543 2 2221110 0 00 01 112233332445677
Q ss_pred EcCCCeEEEEeCCCCeEEEE---EcCCCCCcceeeee--ecCCeEEEEEc-CCCEEEEEECCCCcEEEEEecCCCCCcee
Q 006913 202 SNTQGELYSLSAHSPYFNWI---QDLSSFDKAFTLTP--GNNGYLYVTIP-VRALVLALDTSSGNILWHKSVGPLGSAEY 275 (626)
Q Consensus 202 GT~~GgL~~ld~~tg~~~w~---~~~~s~~~v~sI~~--D~dG~LwVGT~-~gG~l~alD~~tG~~~w~~~~~~l~~~~s 275 (626)
+..++.|..+|..+++.... ........+..+.. +....+++++. ..+.+...|..++.......... ...
T Consensus 168 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~---~v~ 244 (318)
T 4ggc_A 168 GGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHS---QVC 244 (318)
T ss_dssp EETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSS---CEE
T ss_pred EecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccccee---eee
Confidence 77788888888877543211 00011122333332 22334444442 23466667776666554433321 122
Q ss_pred eEEEee-CCeEEEEE--cCCeEEEEcCC-CCEEEEeeccCCCCccccCceEEEEEEecCCcEEEEEeeecCeeEE
Q 006913 276 APVVDS-NGWISVGS--LDGLLYSFSPS-GVLNKFSKSDTSDSVIQSSPYWFHLLGPSIGLKAILCLMVVGQFSS 346 (626)
Q Consensus 276 spvvD~-dG~IWVGT--~~gGLy~~d~~-g~~~~~~~~~~~~~~ilssp~V~~Il~DsdG~IwI~T~t~~Ggl~~ 346 (626)
...... .+.+.+++ .++.|+.+|.. ++...... . ....|.++....+|.+. .+++..|.+..
T Consensus 245 ~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~---g-----H~~~V~~l~~spdg~~l-~S~s~D~~v~i 310 (318)
T 4ggc_A 245 SILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELK---G-----HTSRVLSLTMSPDGATV-ASAAADETLRL 310 (318)
T ss_dssp EEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEEC---C-----CSSCEEEEEECTTSSCE-EEEETTTEEEE
T ss_pred eeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEc---C-----CCCCEEEEEEcCCCCEE-EEEecCCeEEE
Confidence 233333 44566655 57789999864 65554332 1 12346677767777754 55555555443
No 252
>3elq_A Arylsulfate sulfotransferase; beta propeller, protein-substrate complex, periplasm, transesterification, phenol, bacteria; 2.00A {Escherichia coli} PDB: 3ett_A* 3ets_A*
Probab=88.33 E-value=19 Score=40.01 Aligned_cols=151 Identities=15% Similarity=0.122 Sum_probs=85.4
Q ss_pred CeEEEEeCCCcEEEEECCcccccccccccccCC-CCCccccceEEEcCCCeEEEEcCCCeEEEEeCCCCeEEEEEcCCC-
Q 006913 149 RALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTD-VDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSS- 226 (626)
Q Consensus 149 gGL~a~d~~G~~~w~~~~~~~~~~~~~~~~~~l-~~~~i~sspviD~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s- 226 (626)
.+.+.+|.+|.++|..... ..+... ...+ ....+ ....... +|.+.++.. ..++.+|..+ ++.|....+.
T Consensus 175 ~~~~i~D~~G~lrW~~~~~-~~~~~~---~~~~~~~g~l-~~~~g~~-nG~l~~g~G-~~i~elD~~G-kvv~~~~lp~g 246 (571)
T 3elq_A 175 PFTFIVDTEGEYRWWLDQD-TFYDGR---DRDINKRGYL-MGIRETP-RGTFTAVQG-QHWYEFDMMG-QVLEDHKLPRG 246 (571)
T ss_dssp EEEEEECTTSCEEEECCGG-GTCCSS---SCCGGGCSCC-EEEEECT-TSCEEEEEB-TEEEEECTTC-CEEEEEECCTT
T ss_pred CceEEEcCCCcEEEEeCcc-cccccc---eeeccCCCeE-EEEEecC-CCCEEEecC-cEEEEECCCC-cEEEEEECCCC
Confidence 3578999999999985210 000000 0000 01111 1111222 677777753 4699999876 7778765442
Q ss_pred -CCcceeeeeecCCeEEEEEc--------------CCCEEEEEECCCCcEEEEEec----CCC-----------------
Q 006913 227 -FDKAFTLTPGNNGYLYVTIP--------------VRALVLALDTSSGNILWHKSV----GPL----------------- 270 (626)
Q Consensus 227 -~~~v~sI~~D~dG~LwVGT~--------------~gG~l~alD~~tG~~~w~~~~----~~l----------------- 270 (626)
......+....+|++++... -...++-+| .+|+++|.... .+.
T Consensus 247 ~~~~HHD~~~l~nGn~Lv~v~~~d~~~~dG~~~~~vdD~I~EVD-~tGeVv~eW~~~dhld~~~~~~~~~~d~~~~~~~~ 325 (571)
T 3elq_A 247 FADATHESIETPNGTVLLRVGKSNYRRDDGVHVTTIRDHILEVD-KSGRVVDVWDLTKILDPKRDALLGALDAGAVCVNV 325 (571)
T ss_dssp EECBCSCEEECTTSCEEEEEEETTEECTTSCEECCCSCEEEEEC-TTSCEEEEEEHHHHSCTTCCTTGGGSBTTC-----
T ss_pred ccccccceEEcCCCcEEEEEecccccCCCCcccceeccEEEEEC-CCCCEEEEEEhHHccCcccccchhccccccccccc
Confidence 11112344456777665321 124688899 89999886411 000
Q ss_pred -------------------------C-C--ceeeEEEee-CCeEEEEEcCCeEEEEcCCCCEEEEee
Q 006913 271 -------------------------G-S--AEYAPVVDS-NGWISVGSLDGLLYSFSPSGVLNKFSK 308 (626)
Q Consensus 271 -------------------------~-~--~~sspvvD~-dG~IWVGT~~gGLy~~d~~g~~~~~~~ 308 (626)
. . .+.++..+. ++.+.+......|++++.+|++.|..-
T Consensus 326 ~~~~~G~~~~~~~~~~~g~~~g~~~~~Dw~HiNsv~~d~~dd~~liSsR~~~I~~Id~tG~V~W~LG 392 (571)
T 3elq_A 326 DLAHAGQQAKLEPDTPFGDALGVGPGRNWAHVNSIAYDAKDDSIILSSRHQGVVKIGRDKQVKWILA 392 (571)
T ss_dssp --CCCSCBCCCCTTCCSSSSSCSSTTSCSCCEEEEEEETTTTEEEEEETTTEEEEEETTSCEEEEES
T ss_pred cccccccccccccccccccccccCCCCCCcEecceeEcCCCCEEEEECCccEEEEEcCCCcEEEEEC
Confidence 0 0 134555554 567888887778888888888888754
No 253
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=88.22 E-value=32 Score=37.19 Aligned_cols=106 Identities=11% Similarity=0.046 Sum_probs=59.7
Q ss_pred eEEEcCCCeEEE-EcCC----CeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCCeEEEEEcCCC--EEEEEECCCCcEE
Q 006913 190 PVIDQCEGSIYI-SNTQ----GELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRA--LVLALDTSSGNIL 262 (626)
Q Consensus 190 pviD~~dG~LwI-GT~~----GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG~LwVGT~~gG--~l~alD~~tG~~~ 262 (626)
+..++ +|+.++ +..+ ..|+.+|.++++...... ....+..+....||+..+.....+ .++.+|..+|+..
T Consensus 155 ~~~sp-DG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~--~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 155 FVSDI-RGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDS--GEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE 231 (582)
T ss_dssp EEEEE-ETTEEEEEEEEETTEEEEEEEETTTCCCEEECC--SSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE
T ss_pred EEECC-CCCEEEEEEEcCCCCeEEEEEcCCCCCceEeec--CCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE
Confidence 44544 454433 4333 569999988887653322 122345556667886444443455 7889998888876
Q ss_pred EEEecCCCCCceeeEE--------EeeCCeEEEEE-cCCeEEEEcCCCC
Q 006913 263 WHKSVGPLGSAEYAPV--------VDSNGWISVGS-LDGLLYSFSPSGV 302 (626)
Q Consensus 263 w~~~~~~l~~~~sspv--------vD~dG~IWVGT-~~gGLy~~d~~g~ 302 (626)
..... ......+. .++||.+++.. .++.+..++. |+
T Consensus 232 -~~~~~--~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~-g~ 276 (582)
T 3o4h_A 232 -DLELP--SKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID-GE 276 (582)
T ss_dssp -ECCCS--CSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET-TE
T ss_pred -EccCC--CcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE-CC
Confidence 32111 11122233 67788776644 5566666665 54
No 254
>3elq_A Arylsulfate sulfotransferase; beta propeller, protein-substrate complex, periplasm, transesterification, phenol, bacteria; 2.00A {Escherichia coli} PDB: 3ett_A* 3ets_A*
Probab=88.17 E-value=36 Score=37.81 Aligned_cols=117 Identities=13% Similarity=0.165 Sum_probs=72.3
Q ss_pred eCCEEEEEeCCcEEEEcCCCCEEEEEeCCCCC-CcccCeEEecCCeEEEEE----------------CCeEEEEECCCCc
Q 006913 46 EDGKIYACSEKTLFAFESNGTIAWSLDLDFTC-NIGTAPVHGGTGEVYIVA----------------ENRVLKVDLLKIG 108 (626)
Q Consensus 46 ~dG~IwIgSdggL~a~d~~G~~~W~~~~~~~~-~i~~sp~iD~dG~IwVgT----------------~ggL~~id~~~~~ 108 (626)
.+|.+..+....++.+|..|+++|.+.++... ...+...+..+|++++.+ ++.++-+| .++.
T Consensus 216 ~nG~l~~g~G~~i~elD~~Gkvv~~~~lp~g~~~~HHD~~~l~nGn~Lv~v~~~d~~~~dG~~~~~vdD~I~EVD-~tGe 294 (571)
T 3elq_A 216 PRGTFTAVQGQHWYEFDMMGQVLEDHKLPRGFADATHESIETPNGTVLLRVGKSNYRRDDGVHVTTIRDHILEVD-KSGR 294 (571)
T ss_dssp TTSCEEEEEBTEEEEECTTCCEEEEEECCTTEECBCSCEEECTTSCEEEEEEETTEECTTSCEECCCSCEEEEEC-TTSC
T ss_pred CCCCEEEecCcEEEEECCCCcEEEEEECCCCccccccceEEcCCCcEEEEEecccccCCCCcccceeccEEEEEC-CCCC
Confidence 46777777766799999999999988775321 224456666788876622 33677788 5554
Q ss_pred cccceeEEEe----cCCC-CC---------------C-----------------------CCCCeeEEEEEEc-CCeEEE
Q 006913 109 TSESATQVFY----GTGS-GK---------------G-----------------------GTGAIAGIAVSTS-SSSVYI 144 (626)
Q Consensus 109 ~~~~~~~~~~----~~~~-~~---------------~-----------------------~~~~~I~s~~~d~-dG~LwI 144 (626)
.. ..|.. .... .. . ..=--+.++..+. ++++.+
T Consensus 295 Vv---~eW~~~dhld~~~~~~~~~~d~~~~~~~~~~~~~G~~~~~~~~~~~g~~~g~~~~~Dw~HiNsv~~d~~dd~~li 371 (571)
T 3elq_A 295 VV---DVWDLTKILDPKRDALLGALDAGAVCVNVDLAHAGQQAKLEPDTPFGDALGVGPGRNWAHVNSIAYDAKDDSIIL 371 (571)
T ss_dssp EE---EEEEHHHHSCTTCCTTGGGSBTTC-------CCCSCBCCCCTTCCSSSSSCSSTTSCSCCEEEEEEETTTTEEEE
T ss_pred EE---EEEEhHHccCcccccchhccccccccccccccccccccccccccccccccccCCCCCCcEecceeEcCCCCEEEE
Confidence 21 12221 1100 00 0 0001244554554 668888
Q ss_pred EEcCCeEEEEeCCCcEEEEECC
Q 006913 145 NVKGRALFAFMTHGQLLWSAGP 166 (626)
Q Consensus 145 gT~~gGL~a~d~~G~~~w~~~~ 166 (626)
.+....|++++.+|++.|..++
T Consensus 372 SsR~~~I~~Id~tG~V~W~LGg 393 (571)
T 3elq_A 372 SSRHQGVVKIGRDKQVKWILAP 393 (571)
T ss_dssp EETTTEEEEEETTSCEEEEESC
T ss_pred ECCccEEEEEcCCCcEEEEECC
Confidence 8877789999988999999754
No 255
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=87.32 E-value=29 Score=35.72 Aligned_cols=190 Identities=8% Similarity=-0.009 Sum_probs=97.2
Q ss_pred CCeEEEEECCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEcCC-eEEEEEcCCeEEEEeCC-CcEEEEEC
Q 006913 88 TGEVYIVAENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSS-SVYINVKGRALFAFMTH-GQLLWSAG 165 (626)
Q Consensus 88 dG~IwVgT~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG-~LwIgT~~gGL~a~d~~-G~~~w~~~ 165 (626)
++.|-+|.++.|+..|..++.. ...+... .....|..+.-..+| .|..|+.++.|..+|.. ++.+..+.
T Consensus 116 ~n~lAvgld~tV~lWd~~tg~~-----~~~~~~~----~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~ 186 (420)
T 4gga_A 116 GNVLAVALDNSVYLWSASSGDI-----LQLLQME----QPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMT 186 (420)
T ss_dssp TSEEEEEETTEEEEEETTTCCE-----EEEEECC----STTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred CCEEEEEeCCEEEEEECCCCCE-----EEEEEec----CCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEe
Confidence 4445556699999999988742 1111110 112245554444444 56778888889999975 77665431
Q ss_pred CcccccccccccccCCCCCccccceEEEcCCCeEEEEcCCCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCCeEEEEE
Q 006913 166 PVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTI 245 (626)
Q Consensus 166 ~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG~LwVGT 245 (626)
. +. .. ..+...+ +..|..|..++.+..+|.................+..+....+|...+..
T Consensus 187 ~------------h~---~~-v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~ 248 (420)
T 4gga_A 187 S------------HS---AR-VGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASG 248 (420)
T ss_dssp C------------CS---SC-EEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred C------------CC---Cc-eEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeee
Confidence 1 00 11 1223334 55677777788888888766433221111112233444445566444333
Q ss_pred cCCCEEEEEECCCCcEEEE---EecCCCCCceeeEEEee--CCeEEEEE--cCCeEEEEcCC-CCEEE
Q 006913 246 PVRALVLALDTSSGNILWH---KSVGPLGSAEYAPVVDS--NGWISVGS--LDGLLYSFSPS-GVLNK 305 (626)
Q Consensus 246 ~~gG~l~alD~~tG~~~w~---~~~~~l~~~~sspvvD~--dG~IWVGT--~~gGLy~~d~~-g~~~~ 305 (626)
..++.+...+..+++.... ..... ...+..+...+ ...+.+++ .++.|..+|.. ++...
T Consensus 249 ~~D~~v~i~~~~~~~~~~~~~~~~~~~-~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~ 315 (420)
T 4gga_A 249 GNDNLVNVWPSAPGEGGWVPLQTFTQH-QGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLS 315 (420)
T ss_dssp ETTSCEEEEESSCCSSCSCCSEEECCC-SSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEE
T ss_pred eccccceEEeeccccccceeeeeeccc-CCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccce
Confidence 3445666677666542210 01110 11233344432 23444443 56788888864 55444
No 256
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=87.17 E-value=32 Score=36.17 Aligned_cols=249 Identities=13% Similarity=0.103 Sum_probs=121.0
Q ss_pred ccCCceeeeeEEe-eCCEEEEEe----CC---cEEEEcC---------CCCEEEEEeCCCCCC-c--ccCeEEecCCeEE
Q 006913 33 RRSAFRLSKPLIG-EDGKIYACS----EK---TLFAFES---------NGTIAWSLDLDFTCN-I--GTAPVHGGTGEVY 92 (626)
Q Consensus 33 ~~~~~~~Sspvid-~dG~IwIgS----dg---gL~a~d~---------~G~~~W~~~~~~~~~-i--~~sp~iD~dG~Iw 92 (626)
.+.+.+-....+| .+|+|+++- .| .|-.++. ++.++-.++--..|. + +..+.+|..|+||
T Consensus 22 ~p~n~~P~gv~vd~~~gRiFvt~PR~~~gvp~TL~~v~~~~~~~~~~~~p~ll~PYP~w~~~~~lvsV~~v~iD~~~rLW 101 (381)
T 3q6k_A 22 NPDNMISTAFAYDAEGEKLFLAVPRKLPRVPYTLAEVDTKNSLGVKGKHSPLLNKFSGHKTGKELTSIYQPVIDDCRRLW 101 (381)
T ss_dssp CGGGCCCCEEEEETTTTEEEEECCTTSTTCSCSEEEEEHHHHTTCTTCSSCCBEECTTCSSSCSSSCEEEEEECTTCEEE
T ss_pred ccCccceeeeeeecCCCcEEEEeCCCCCCCCcEEEEEeCCCCcccccCCcccccCCCCCccccceEEeeEEEEcCCCcEE
Confidence 3455566667775 789999985 22 4555543 112201222101121 2 3456789999999
Q ss_pred EEECC-----------------eEEEEECCCC--ccccceeEEEecCCCCCCCCCCeeEEEEEE-c-------CCeEEEE
Q 006913 93 IVAEN-----------------RVLKVDLLKI--GTSESATQVFYGTGSGKGGTGAIAGIAVST-S-------SSSVYIN 145 (626)
Q Consensus 93 VgT~g-----------------gL~~id~~~~--~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d-~-------dG~LwIg 145 (626)
|...| .|.++|..+. +. ...+.++... ......+..+..| . ++.+||+
T Consensus 102 VLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~l---i~~y~~p~~~--~~~~S~l~di~VD~~~~~~~c~~~~aYIt 176 (381)
T 3q6k_A 102 VVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPE---VVRYYFPTRL--VEKPTYFGGFAVDVANPKGDCSETFVYIT 176 (381)
T ss_dssp EEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCE---EEEEECCGGG--CCCGGGEEEEEEEESCTTTTSCSEEEEEE
T ss_pred EEeCCCcCcCCCccccCCCCCceEEEEECCCCCcee---EEEEECCHHh--cccCCccceEEEecccCCCCCCccEEEEE
Confidence 97421 3778888876 42 0122332211 1122344555555 2 5678998
Q ss_pred Ec-CCeEEEEeCCCcEEEEECCcccccccccccccCCCCCcc-----ccceEEEcC----CCeEEEEcCCC-eEEEEeC-
Q 006913 146 VK-GRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYF-----TSVPVIDQC----EGSIYISNTQG-ELYSLSA- 213 (626)
Q Consensus 146 T~-~gGL~a~d~~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i-----~sspviD~~----dG~LwIGT~~G-gL~~ld~- 213 (626)
.. ..||..||......|+... ..+.......-...+..+ ...+++.+. +..||.....+ .+|++..
T Consensus 177 D~~~~gLIVydl~~~~swRv~~--~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~ 254 (381)
T 3q6k_A 177 NFLRGALFIYDHKKQDSWNVTH--PTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTK 254 (381)
T ss_dssp ETTTTEEEEEETTTTEEEEEEC--GGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHH
T ss_pred cCCCCcEEEEECCCCcEEEEcc--CCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHH
Confidence 64 4899999986445577511 000000000000000000 011222211 23566655433 5666641
Q ss_pred --CC----CeEEEEEcCCCCCcceeeeee-cCCeEEEEEcCCCEEEEEECCC-----CcEEEEEecCCCCCceeeEEEee
Q 006913 214 --HS----PYFNWIQDLSSFDKAFTLTPG-NNGYLYVTIPVRALVLALDTSS-----GNILWHKSVGPLGSAEYAPVVDS 281 (626)
Q Consensus 214 --~t----g~~~w~~~~~s~~~v~sI~~D-~dG~LwVGT~~gG~l~alD~~t-----G~~~w~~~~~~l~~~~sspvvD~ 281 (626)
+. ..++-.-..+........+.| .+|.||++......+.+.++.+ ++......-..+ .....+.++.
T Consensus 255 ~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l-~~pd~~~i~~ 333 (381)
T 3q6k_A 255 ELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRF-VFGTDISVDS 333 (381)
T ss_dssp HHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTC-CSEEEEEECT
T ss_pred HhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCc-cccCeEEECC
Confidence 11 111111111111112234665 7899999987777899998654 122211111111 1245566777
Q ss_pred CCeEEEEE
Q 006913 282 NGWISVGS 289 (626)
Q Consensus 282 dG~IWVGT 289 (626)
+|.||+-+
T Consensus 334 ~g~Lwv~s 341 (381)
T 3q6k_A 334 KGGLWFMS 341 (381)
T ss_dssp TSCEEEEE
T ss_pred CCeEEEEE
Confidence 88888877
No 257
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=86.92 E-value=52 Score=38.31 Aligned_cols=195 Identities=7% Similarity=-0.029 Sum_probs=113.0
Q ss_pred ccCeEEecCCeEEE-EE-CCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEcCCeEEEEeCC
Q 006913 80 GTAPVHGGTGEVYI-VA-ENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTH 157 (626)
Q Consensus 80 ~~sp~iD~dG~IwV-gT-~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~~gGL~a~d~~ 157 (626)
+.++..+.+|.+.+ |+ ++.|..++..+.. ...... ... .|..+....+..|..++.++.|..+|..
T Consensus 20 V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~-----~~~~~~------~~~-~V~~l~fspg~~L~S~s~D~~v~lWd~~ 87 (902)
T 2oaj_A 20 PIAAAFDFTQNLLAIATVTGEVHIYGQQQVE-----VVIKLE------DRS-AIKEMRFVKGIYLVVINAKDTVYVLSLY 87 (902)
T ss_dssp EEEEEEETTTTEEEEEETTSEEEEECSTTCE-----EEEECS------SCC-CEEEEEEETTTEEEEEETTCEEEEEETT
T ss_pred cEEEEECCCCCEEEEEeCCCEEEEEeCCCcE-----EEEEcC------CCC-CEEEEEEcCCCEEEEEECcCeEEEEECC
Confidence 44566677777544 45 6778888876542 111111 112 3333333344447777888889899975
Q ss_pred -CcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcCCCeEEEEeCCCCeEEEEE--------c-CC-C
Q 006913 158 -GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQ--------D-LS-S 226 (626)
Q Consensus 158 -G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~~GgL~~ld~~tg~~~w~~--------~-~~-s 226 (626)
++.+..+.. . .. ..++...+.+..|++|+.+|.|..+|.++++..-+. . .. .
T Consensus 88 ~~~~~~~~~~-------~---------~~-V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h 150 (902)
T 2oaj_A 88 SQKVLTTVFV-------P---------GK-ITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAAR 150 (902)
T ss_dssp TCSEEEEEEC-------S---------SC-EEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSC
T ss_pred CCcEEEEEcC-------C---------CC-EEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccC
Confidence 766544300 0 11 123344443566888999999999999988753111 0 01 1
Q ss_pred CCcceeeeeecC--CeEEEEEcCCCEEEEEECCCCcEEEEEecC----CC------------CCceeeEEEeeCCe-EEE
Q 006913 227 FDKAFTLTPGNN--GYLYVTIPVRALVLALDTSSGNILWHKSVG----PL------------GSAEYAPVVDSNGW-ISV 287 (626)
Q Consensus 227 ~~~v~sI~~D~d--G~LwVGT~~gG~l~alD~~tG~~~w~~~~~----~l------------~~~~sspvvD~dG~-IWV 287 (626)
...+.++....+ +.|.+|. .++.+ ..|..+++....+... .. ...+.++...++|. |..
T Consensus 151 ~~~V~sl~~sp~~~~~l~~g~-~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~las 228 (902)
T 2oaj_A 151 LSPIVSIQWNPRDIGTVLISY-EYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIIT 228 (902)
T ss_dssp CCCCCEEEEETTEEEEEEEEC-SSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEE
T ss_pred CCCeEEEEEccCCCCEEEEEe-CCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEE
Confidence 223556665543 3566665 45677 8898888776544321 00 01245566776765 666
Q ss_pred EEcCCeEEEEcCC-CCEEE
Q 006913 288 GSLDGLLYSFSPS-GVLNK 305 (626)
Q Consensus 288 GT~~gGLy~~d~~-g~~~~ 305 (626)
|+.++.|..+|.. ++...
T Consensus 229 gs~Dg~i~lWd~~~g~~~~ 247 (902)
T 2oaj_A 229 IHEDNSLVFWDANSGHMIM 247 (902)
T ss_dssp EETTCCEEEEETTTCCEEE
T ss_pred EECCCeEEEEECCCCcEEE
Confidence 7788899999974 66543
No 258
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=86.78 E-value=56 Score=38.46 Aligned_cols=221 Identities=11% Similarity=0.078 Sum_probs=112.0
Q ss_pred eeEEeeCCE-EEEEeCCcEEEEcCCCCEEEEEeCCCC---------CCcccCeEEe-cCCe-EEEEECCeEEEEECCCCc
Q 006913 41 KPLIGEDGK-IYACSEKTLFAFESNGTIAWSLDLDFT---------CNIGTAPVHG-GTGE-VYIVAENRVLKVDLLKIG 108 (626)
Q Consensus 41 spvid~dG~-IwIgSdggL~a~d~~G~~~W~~~~~~~---------~~i~~sp~iD-~dG~-IwVgT~ggL~~id~~~~~ 108 (626)
.+....+|. |..+.++.|+.++.++..+..+..... ...+.++... .+|. |.++..+.|+.++..++.
T Consensus 249 ~~~~SpDG~~la~~~~~~i~~~d~~~~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~~~~i~~~~~~~~~ 328 (1045)
T 1k32_A 249 PRHLNTDGRRILFSKGGSIYIFNPDTEKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVSRGQAFIQDVSGTY 328 (1045)
T ss_dssp EEEEEESSSCEEEEETTEEEEECTTTCCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEETTEEEEECTTSSB
T ss_pred eeeEcCCCCEEEEEeCCEEEEecCCceEeeeeccCcccccccccccccccceeeecCCCCCEEEEEEcCEEEEEcCCCCc
Confidence 445556665 444557778888863322212211100 0123456667 7776 545557888888876642
Q ss_pred cccceeEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEcCCeEE-EEeCC-CcEEEEECCcccccccccccccCCCCCcc
Q 006913 109 TSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALF-AFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYF 186 (626)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~~gGL~-a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i 186 (626)
..... ......+..+....+..|+.++....|+ .++.. ++.. ... + . ...
T Consensus 329 ------~~~~~-----~~~~~~~~~~~~sdg~~l~~~s~~~~l~~~~d~~~~~~~-~l~------~------~---~~~- 380 (1045)
T 1k32_A 329 ------VLKVP-----EPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAE-KFE------E------N---LGN- 380 (1045)
T ss_dssp ------EEECS-----CCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEE-ECC------C------C---CCS-
T ss_pred ------eEEcc-----CCCcceEEeeeEcCCCeEEEEECCCceEEEEECCCCCce-Eec------C------C---ccc-
Confidence 11111 0111022222222223455556566777 77865 4332 210 0 0 011
Q ss_pred ccceEEEcCCCeEEEEcCCCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCCe-EEEEEcCC---------CEEEEEEC
Q 006913 187 TSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGY-LYVTIPVR---------ALVLALDT 256 (626)
Q Consensus 187 ~sspviD~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG~-LwVGT~~g---------G~l~alD~ 256 (626)
...+...+.+..|..+..++.|+.+|.++++........ ...+..+....||+ |..+...+ ..++.+|.
T Consensus 381 ~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~-~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~ 459 (1045)
T 1k32_A 381 VFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSR-EAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDM 459 (1045)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECS-SSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEET
T ss_pred eeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCC-CCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEEC
Confidence 133455542445777777888999999998876543211 12234455566775 43333222 37888898
Q ss_pred CCCcEEEEEecCCCCCceeeEEEeeCCe-EEEEEcCCe
Q 006913 257 SSGNILWHKSVGPLGSAEYAPVVDSNGW-ISVGSLDGL 293 (626)
Q Consensus 257 ~tG~~~w~~~~~~l~~~~sspvvD~dG~-IWVGT~~gG 293 (626)
.+++.. .. ... ......+...++|. |++++..++
T Consensus 460 ~~g~~~-~l-~~~-~~~~~~~~~spdG~~l~~~s~~~~ 494 (1045)
T 1k32_A 460 EGRKIF-AA-TTE-NSHDYAPAFDADSKNLYYLSYRSL 494 (1045)
T ss_dssp TTTEEE-EC-SCS-SSBEEEEEECTTSCEEEEEESCCC
T ss_pred CCCcEE-Ee-eCC-CcccCCceEcCCCCEEEEEecccC
Confidence 877632 21 111 12234566776774 777775444
No 259
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=86.19 E-value=46 Score=36.93 Aligned_cols=66 Identities=12% Similarity=0.148 Sum_probs=40.7
Q ss_pred eeeeEEeeCCE-EEEEeCCcEEEEcC-CC---CEEEEEeCCCCCCcccCeEEecCCe-EEEEECCeEEEEECCCC
Q 006913 39 LSKPLIGEDGK-IYACSEKTLFAFES-NG---TIAWSLDLDFTCNIGTAPVHGGTGE-VYIVAENRVLKVDLLKI 107 (626)
Q Consensus 39 ~Sspvid~dG~-IwIgSdggL~a~d~-~G---~~~W~~~~~~~~~i~~sp~iD~dG~-IwVgT~ggL~~id~~~~ 107 (626)
...+....||+ |..++.+.|+.+|. ++ ... .+.........+....+|+ |..+.++.|+.+|..++
T Consensus 111 v~~~~~SpDg~~l~~~~~~~i~~~d~~~~~~~~~~---~l~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~~g 182 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPLGGELYLYDLKQEGKAAVR---QLTHGEGFATDAKLSPKGGFVSFIRGRNLWVIDLASG 182 (741)
T ss_dssp SCCCEECTTSSEEEEEETTEEEEEESSSCSTTSCC---BCCCSSSCEEEEEECTTSSEEEEEETTEEEEEETTTT
T ss_pred cceeEECCCCCEEEEEeCCcEEEEECCCCCcceEE---EcccCCcccccccCCCCCCEEEEEeCCcEEEEecCCC
Confidence 45667767776 45556778888887 55 332 1111112234566677887 44455788999998775
No 260
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=85.57 E-value=34 Score=34.86 Aligned_cols=232 Identities=13% Similarity=0.098 Sum_probs=120.3
Q ss_pred eeEEeeCC-EEEEEe-----------CCcEEEEcC-CCCEEEEEeCCCC----CCcccCeEEecCCe-EEEEE---CCeE
Q 006913 41 KPLIGEDG-KIYACS-----------EKTLFAFES-NGTIAWSLDLDFT----CNIGTAPVHGGTGE-VYIVA---ENRV 99 (626)
Q Consensus 41 spvid~dG-~IwIgS-----------dggL~a~d~-~G~~~W~~~~~~~----~~i~~sp~iD~dG~-IwVgT---~ggL 99 (626)
..++..+| .+|++. ++.+..+|. +++....+..... ......+.++.+|+ +|++. .+.|
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v 133 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSI 133 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEE
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeE
Confidence 55665666 688875 235889997 7776655543210 01234567777875 77765 3579
Q ss_pred EEEECCCCccccceeEEE-ecCCCCCCCCCCeeEEEEEEcC-CeEEE-EEcCCeEEEEeC--CCcEEEEECCcccccccc
Q 006913 100 LKVDLLKIGTSESATQVF-YGTGSGKGGTGAIAGIAVSTSS-SSVYI-NVKGRALFAFMT--HGQLLWSAGPVLDQLGYR 174 (626)
Q Consensus 100 ~~id~~~~~~~~~~~~~~-~~~~~~~~~~~~~I~s~~~d~d-G~LwI-gT~~gGL~a~d~--~G~~~w~~~~~~~~~~~~ 174 (626)
..+|..+++. .-. ... ..... .....+ ...++ .+.++.+..++. +|+..+.... ...+.
T Consensus 134 ~v~d~~~~~~-----~~~~i~~-------~~~~~-v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~-~~~~~-- 197 (361)
T 2oiz_A 134 GIVDVAKGDY-----VEDVTAA-------AGCWS-VIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRS-KQMFS-- 197 (361)
T ss_dssp EEEETTTTEE-----EEEEGGG-------TTEEE-EEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEEC-CCCSC--
T ss_pred EEEECCCCcE-----EEEEecC-------CCcce-eEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccc-cceEc--
Confidence 9999887631 111 110 00100 111111 12222 234444544442 3555432100 00000
Q ss_pred cccccCCCCCccccceEEEcCCCeEEEEcCCCeEEEEeCCCCeEEEEEc--CCC-----C----CcceeeeeecC-CeEE
Q 006913 175 QGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQD--LSS-----F----DKAFTLTPGNN-GYLY 242 (626)
Q Consensus 175 ~~~~~~l~~~~i~sspviD~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~--~~s-----~----~~v~sI~~D~d-G~Lw 242 (626)
. ....+...+..+ +..+|+.+.++.++.+|..++....... ... . .....++.+.+ +++|
T Consensus 198 ~------~~~~~~~~~~~~--g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~ly 269 (361)
T 2oiz_A 198 V------KDDPIFIAPALD--KDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMY 269 (361)
T ss_dssp T------TTSCBCSCCEEC--SSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEE
T ss_pred C------CCCceEEEeccc--CCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEE
Confidence 0 000111112223 4567777778889999987654332211 000 0 00111344555 6899
Q ss_pred EEEc-C---------CCEEEEEECCCCcEEEEEecCCCCCceeeEEEeeCC-eEEEEEcCCeEEEEcCC-C
Q 006913 243 VTIP-V---------RALVLALDTSSGNILWHKSVGPLGSAEYAPVVDSNG-WISVGSLDGLLYSFSPS-G 301 (626)
Q Consensus 243 VGT~-~---------gG~l~alD~~tG~~~w~~~~~~l~~~~sspvvD~dG-~IWVGT~~gGLy~~d~~-g 301 (626)
++.. + ...+..+|..+++.+-....+. ...+.++++| .||++.. +.|..+|.. +
T Consensus 270 v~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~----p~~ia~spdg~~l~v~n~-~~v~v~D~~t~ 335 (361)
T 2oiz_A 270 VFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD----ALSMTIDQQRNLMLTLDG-GNVNVYDISQP 335 (361)
T ss_dssp EEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT----CCEEEEETTTTEEEEECS-SCEEEEECSSS
T ss_pred EEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC----eeEEEECCCCCEEEEeCC-CeEEEEECCCC
Confidence 9753 1 2478889999998876655542 4456777676 5776665 899999975 6
No 261
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=83.03 E-value=47 Score=36.93 Aligned_cols=63 Identities=13% Similarity=0.175 Sum_probs=37.1
Q ss_pred EEeeCCEEEEEe---CCcEEEEcC-CCCEEEEEeCCCCCCc-ccCeEEecCCeEEEEEC--------CeEEEEECCCC
Q 006913 43 LIGEDGKIYACS---EKTLFAFES-NGTIAWSLDLDFTCNI-GTAPVHGGTGEVYIVAE--------NRVLKVDLLKI 107 (626)
Q Consensus 43 vid~dG~IwIgS---dggL~a~d~-~G~~~W~~~~~~~~~i-~~sp~iD~dG~IwVgT~--------ggL~~id~~~~ 107 (626)
++..+|.||+.. ...+.+||. ++ .|.....-.... ..+.+.-.+|.||+... +.+.++|+.++
T Consensus 249 ~~~~~g~lyv~GG~~~~~v~~yd~~t~--~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~ 324 (656)
T 1k3i_A 249 SMDGNGQIVVTGGNDAKKTSLYDSSSD--SWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSK 324 (656)
T ss_dssp EECTTSCEEEECSSSTTCEEEEEGGGT--EEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTT
T ss_pred cCCCCCCEEEeCCCCCCceEEecCcCC--ceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCC
Confidence 333578898853 246999998 44 575432211111 22333434788988532 35888999875
No 262
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=81.95 E-value=26 Score=37.84 Aligned_cols=102 Identities=13% Similarity=0.116 Sum_probs=60.4
Q ss_pred CCeEEEEcCCCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCCeEEEEEcCC----CEEEEEECCCCcEEEEEecCCCC
Q 006913 196 EGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVR----ALVLALDTSSGNILWHKSVGPLG 271 (626)
Q Consensus 196 dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG~LwVGT~~g----G~l~alD~~tG~~~w~~~~~~l~ 271 (626)
++.+++....+++..+|.++++......... .++..+.||+.++..... ..++.+|..+|+....... .
T Consensus 122 ~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~----~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~---~ 194 (582)
T 3o4h_A 122 EAVVFTGATEDRVALYALDGGGLRELARLPG----FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSG---E 194 (582)
T ss_dssp SCEEEEEECSSCEEEEEEETTEEEEEEEESS----CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCS---S
T ss_pred CeEEEEecCCCCceEEEccCCcEEEeecCCC----ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecC---C
Confidence 4456666666667788888877654332111 345556678655532222 4688899888876532211 1
Q ss_pred CceeeEEEeeCCe-EEEEEcCC--eEEEEcCC-CCEE
Q 006913 272 SAEYAPVVDSNGW-ISVGSLDG--LLYSFSPS-GVLN 304 (626)
Q Consensus 272 ~~~sspvvD~dG~-IWVGT~~g--GLy~~d~~-g~~~ 304 (626)
.....+...+||. |+.+..++ .|+.+|.+ ++..
T Consensus 195 ~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 195 GSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE 231 (582)
T ss_dssp CEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE
T ss_pred CccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE
Confidence 2346688888886 44334445 69999976 4444
No 263
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=81.89 E-value=34 Score=32.01 Aligned_cols=150 Identities=11% Similarity=0.001 Sum_probs=73.9
Q ss_pred eEEEEEEcCCeEEEEEcCCeEEEEeCC--CcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcC----
Q 006913 131 AGIAVSTSSSSVYINVKGRALFAFMTH--GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNT---- 204 (626)
Q Consensus 131 I~s~~~d~dG~LwIgT~~gGL~a~d~~--G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~---- 204 (626)
+..+....+|+.++...++.|+.+|.. ++..... . . .. .. ....+...+.+..|+++..
T Consensus 44 v~~~~~spdg~~l~~~~~~~i~~~d~~~~~~~~~~~-~-----~------~~--~~-~~~~~~~spdg~~l~~~~~~~~~ 108 (297)
T 2ojh_A 44 FEAPNWSPDGKYLLLNSEGLLYRLSLAGDPSPEKVD-T-----G------FA--TI-CNNDHGISPDGALYAISDKVEFG 108 (297)
T ss_dssp CEEEEECTTSSEEEEEETTEEEEEESSSCCSCEECC-C-----T------TC--CC-BCSCCEECTTSSEEEEEECTTTS
T ss_pred eEeeEECCCCCEEEEEcCCeEEEEeCCCCCCceEec-c-----c------cc--cc-cccceEECCCCCEEEEEEeCCCC
Confidence 344444556664444456789999964 4432211 0 0 00 00 1133455441334555542
Q ss_pred CCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCCe-EEEEEcCCC--EEEEEECCCCcEEEEEecCCCCCceeeEEEee
Q 006913 205 QGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGY-LYVTIPVRA--LVLALDTSSGNILWHKSVGPLGSAEYAPVVDS 281 (626)
Q Consensus 205 ~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG~-LwVGT~~gG--~l~alD~~tG~~~w~~~~~~l~~~~sspvvD~ 281 (626)
...|+.++..++....... ...+..+....||+ |++.....+ .++.++..++........ ......+...+
T Consensus 109 ~~~l~~~~~~~~~~~~~~~---~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~---~~~~~~~~~s~ 182 (297)
T 2ojh_A 109 KSAIYLLPSTGGTPRLMTK---NLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHG---EGRNDGPDYSP 182 (297)
T ss_dssp SCEEEEEETTCCCCEECCS---SSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCS---SSCEEEEEECT
T ss_pred cceEEEEECCCCceEEeec---CCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccC---CCccccceECC
Confidence 4578888887765432211 11234445555664 443332233 566677666655322111 12345567777
Q ss_pred CCe-EEEEEc-C--CeEEEEcCCC
Q 006913 282 NGW-ISVGSL-D--GLLYSFSPSG 301 (626)
Q Consensus 282 dG~-IWVGT~-~--gGLy~~d~~g 301 (626)
+|. |++++. + ..||.++..+
T Consensus 183 dg~~l~~~~~~~~~~~i~~~~~~~ 206 (297)
T 2ojh_A 183 DGRWIYFNSSRTGQMQIWRVRVDG 206 (297)
T ss_dssp TSSEEEEEECTTSSCEEEEEETTS
T ss_pred CCCEEEEEecCCCCccEEEECCCC
Confidence 775 565553 3 3577776543
No 264
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=81.48 E-value=52 Score=33.90 Aligned_cols=250 Identities=10% Similarity=-0.019 Sum_probs=121.5
Q ss_pred CEEEEEeC---C---cEEEEcC-CCCEEEEEeCCCCCCcccCeEEecCCe-EEEEE-----------CCeEEEEECCCCc
Q 006913 48 GKIYACSE---K---TLFAFES-NGTIAWSLDLDFTCNIGTAPVHGGTGE-VYIVA-----------ENRVLKVDLLKIG 108 (626)
Q Consensus 48 G~IwIgSd---g---gL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~dG~-IwVgT-----------~ggL~~id~~~~~ 108 (626)
..+|++.. + .++.||. +++..-.++.+. ...+.+..+|+ +|++. ++.|..+|..+.+
T Consensus 33 ~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~----~p~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~ 108 (373)
T 2mad_H 33 RRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGF----LPNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFL 108 (373)
T ss_pred CEEEEeCCcccCCccEEEEEECCCCeEEEEecCCC----CCCeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCc
Confidence 46888652 1 5799998 777664444332 12566777775 78874 2458899987653
Q ss_pred cccceeEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEc--CCeEEEEeCC-CcEEEE-ECCcccccccccccccCCCCC
Q 006913 109 TSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVK--GRALFAFMTH-GQLLWS-AGPVLDQLGYRQGCTKTDVDC 184 (626)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~--~gGL~a~d~~-G~~~w~-~~~~~~~~~~~~~~~~~l~~~ 184 (626)
. ...+..+...............+...+..||++.. .+.|..+| . ++..-. . + . ..|
T Consensus 109 ~---~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i-------~--~------~~~ 169 (373)
T 2mad_H 109 P---IADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLL-------S--S------PTC 169 (373)
T ss_pred E---EEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEc-------C--C------Cce
Confidence 1 01111110000000001112223334556898864 36699999 7 666443 2 1 0 011
Q ss_pred ccccceEEEcCCCeEEEE-cCCCeEEEEeCCCCeEEEEEcC-----CCCCcceeee-eecCCeEEEEEcCCCEEEEEECC
Q 006913 185 YFTSVPVIDQCEGSIYIS-NTQGELYSLSAHSPYFNWIQDL-----SSFDKAFTLT-PGNNGYLYVTIPVRALVLALDTS 257 (626)
Q Consensus 185 ~i~sspviD~~dG~LwIG-T~~GgL~~ld~~tg~~~w~~~~-----~s~~~v~sI~-~D~dG~LwVGT~~gG~l~alD~~ 257 (626)
+ .+.. .+++.|+. +.+|.+..++. +++..+.... ........+. ...++.+|+.+. .+.++.+|..
T Consensus 170 -~---~~~~-~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~-~~~v~vid~~ 242 (373)
T 2mad_H 170 -Y---HIHP-GAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVY-SGKILQADIS 242 (373)
T ss_pred -E---EEEe-CCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcC-CceEEEEecc
Confidence 1 1112 13344443 34677888888 7666643221 1000001111 112456666553 5688888876
Q ss_pred CCcEEE--EEecCC-------C-CCceeeEEEeeC-CeEEEEEc----------CCeEEEEcCC-CCEEEEeeccCCCCc
Q 006913 258 SGNILW--HKSVGP-------L-GSAEYAPVVDSN-GWISVGSL----------DGLLYSFSPS-GVLNKFSKSDTSDSV 315 (626)
Q Consensus 258 tG~~~w--~~~~~~-------l-~~~~sspvvD~d-G~IWVGT~----------~gGLy~~d~~-g~~~~~~~~~~~~~~ 315 (626)
++.... ...... . ..-...+.++++ +++|+... .+.|+.+|.. ++....... ..
T Consensus 243 ~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~--g~-- 318 (373)
T 2mad_H 243 AAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL--GH-- 318 (373)
T ss_pred CCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEEC--CC--
Confidence 553221 111100 0 000111334444 67999764 2469999975 555443331 11
Q ss_pred cccCceEEEEEEecCCc-EEEE
Q 006913 316 IQSSPYWFHLLGPSIGL-KAIL 336 (626)
Q Consensus 316 ilssp~V~~Il~DsdG~-IwI~ 336 (626)
....+..+.+|. +++.
T Consensus 319 -----~p~~i~~s~Dg~~~l~v 335 (373)
T 2mad_H 319 -----DVDAISVAQDGGPDLYA 335 (373)
T ss_pred -----CcCeEEECCCCCeEEEE
Confidence 123566677887 5533
No 265
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=81.41 E-value=82 Score=36.13 Aligned_cols=244 Identities=13% Similarity=0.150 Sum_probs=120.9
Q ss_pred ceeeeeEEee--CCEEEEEe-CCcEEEEcCCCCEEEEEeCCCC------CCcccCeEEec--CCeEEEEE-C------Ce
Q 006913 37 FRLSKPLIGE--DGKIYACS-EKTLFAFESNGTIAWSLDLDFT------CNIGTAPVHGG--TGEVYIVA-E------NR 98 (626)
Q Consensus 37 ~~~Sspvid~--dG~IwIgS-dggL~a~d~~G~~~W~~~~~~~------~~i~~sp~iD~--dG~IwVgT-~------gg 98 (626)
......+++. .+.+|+++ .++|++-+..|+ .|....... ...+.++.+|. .+.+|+++ + ++
T Consensus 15 g~i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG~-tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~~ 93 (789)
T 1sqj_A 15 GYITGIVAHPKTKDLLYARTDIGGAYRWDAGTS-KWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWAA 93 (789)
T ss_dssp SCEEEEEECSSSTTCEEEEESSSCEEEEETTTT-EEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCCE
T ss_pred CcEEEEEECCCCCCEEEEEecCCCEEEecCCCC-CeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcccE
Confidence 3445555544 47899998 578888775555 676533211 01244566664 35799987 2 45
Q ss_pred EEEEECCCCccccceeEEEecCCCCCC---CCCC-eeEEEEEE--cCCeEEEEEcCCeEEEEeCCCcEEEEECCcccccc
Q 006913 99 VLKVDLLKIGTSESATQVFYGTGSGKG---GTGA-IAGIAVST--SSSSVYINVKGRALFAFMTHGQLLWSAGPVLDQLG 172 (626)
Q Consensus 99 L~~id~~~~~~~~~~~~~~~~~~~~~~---~~~~-~I~s~~~d--~dG~LwIgT~~gGL~a~d~~G~~~w~~~~~~~~~~ 172 (626)
|++- .+.+. .|.....+... ..+. .+..+..+ ..+.+|+++..++|++-+-.|+ .|.... ..+
T Consensus 94 v~~S-~DgG~------TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl~~S~DgG~-TW~~~~---~~~ 162 (789)
T 1sqj_A 94 FYVS-EDRGQ------SFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGIWKSSDRAK-TWTNVT---SIP 162 (789)
T ss_dssp EEEE-SSTTS------EEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCEEEESSTTS-SCEEET---TSC
T ss_pred EEEE-CCCCC------cceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCEEEECCCCc-ccCCCc---cCc
Confidence 5554 44442 33221111000 0111 11222223 3468999986677765433354 476311 000
Q ss_pred cccccccCCCCCccccceEEEcC-CCeEEEEcCC-CeEEEEeCCCCeEEEEEcCCC-CCc-----------------cee
Q 006913 173 YRQGCTKTDVDCYFTSVPVIDQC-EGSIYISNTQ-GELYSLSAHSPYFNWIQDLSS-FDK-----------------AFT 232 (626)
Q Consensus 173 ~~~~~~~~l~~~~i~sspviD~~-dG~LwIGT~~-GgL~~ld~~tg~~~w~~~~~s-~~~-----------------v~s 232 (626)
... .....+ ..+.+++. .+.||++... ++|++ ..++|+ .|...... ... ...
T Consensus 163 -~~~----~~~~~~-~~i~~~p~~~~~~~~~~~~~~~v~~-S~DgG~-TW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (789)
T 1sqj_A 163 -DAF----TNGIGY-TSVIFDPERNGTIYASATAPQGMYV-THDGGV-SWEPVAGQPSSWLNRTTGAFPDKKPASIAPQP 234 (789)
T ss_dssp -CCC----STTTCE-EEEEECTTSTTCEEEEESSTTCEEE-ESSTTS-SCEECTTCCCSCCHHHHHTSTTCCCSSSSCEE
T ss_pred -ccc----CCCCCe-EEEEECCCCCCEEEEEEcCCCeEEE-EcCCCc-CcccCCCCcCccccccccccCcccccccccce
Confidence 000 001111 23445431 4689999875 66664 566654 47643211 000 023
Q ss_pred eeeec-CCeEEEEEc--------CCCEEEEEECCCCcEEEEEecCCCC----------Cc----eeeEEEee--CCeEEE
Q 006913 233 LTPGN-NGYLYVTIP--------VRALVLALDTSSGNILWHKSVGPLG----------SA----EYAPVVDS--NGWISV 287 (626)
Q Consensus 233 I~~D~-dG~LwVGT~--------~gG~l~alD~~tG~~~w~~~~~~l~----------~~----~sspvvD~--dG~IWV 287 (626)
+..+. +++||++.. ..+.++.-+ ++-..|+....... .+ +..+.+++ .+.||+
T Consensus 235 ~~~~p~~~~l~~~~~~~~~p~~g~~g~l~~S~--DgG~tW~~~~~~~~~~~p~~~~~~~~~~~g~~~lav~p~~~~~v~~ 312 (789)
T 1sqj_A 235 MKVALTPNFLYVTYADYPGPWGVTFGEVWRQN--RTSGAWDDITPRVGNSSPAPYNNQTFPAGGFCGLSVDATNPNRLVV 312 (789)
T ss_dssp EEEEECSSEEEEEEESSCSSSCCCCCCEEEEE--TTTCCEEECCCCTTTEESCCCSSCCSCCCEEEEEEEETTEEEEEEE
T ss_pred eEEcCCCCeEEEEEecCCCCCCCCCceEEEEe--CCCCceEECcCCCCccccccccccccccCceEEEEECCCCCCEEEE
Confidence 34443 788998741 234566554 34445664222101 11 23455553 357999
Q ss_pred EEcC-------CeEEEEcCCCC
Q 006913 288 GSLD-------GLLYSFSPSGV 302 (626)
Q Consensus 288 GT~~-------gGLy~~d~~g~ 302 (626)
++.+ ++||+-...|+
T Consensus 313 ~~~~~~~~~~~~~l~~S~DgG~ 334 (789)
T 1sqj_A 313 ITLDRDPGPALDSIYLSTDAGA 334 (789)
T ss_dssp EEECCCSCSSCCCEEEESSTTS
T ss_pred EEeccCCCcccccEEEecCCCC
Confidence 9865 67877755454
No 266
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=80.63 E-value=58 Score=33.91 Aligned_cols=74 Identities=16% Similarity=0.160 Sum_probs=44.0
Q ss_pred eEEEcCCCeEEEEcCCCeEEEEeCC-----CCeEEEEEcCCCC-Ccce--eeeeecC--CeEEEEEcCCCEEEEEECC-C
Q 006913 190 PVIDQCEGSIYISNTQGELYSLSAH-----SPYFNWIQDLSSF-DKAF--TLTPGNN--GYLYVTIPVRALVLALDTS-S 258 (626)
Q Consensus 190 pviD~~dG~LwIGT~~GgL~~ld~~-----tg~~~w~~~~~s~-~~v~--sI~~D~d--G~LwVGT~~gG~l~alD~~-t 258 (626)
+++|...+.||++-.+.||.+|+.+ ++++......+.. ..+. +++...+ |.|++...+...+..+|.. +
T Consensus 185 cvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~ 264 (355)
T 3amr_A 185 MAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGK 264 (355)
T ss_dssp EEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTT
T ss_pred EEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCC
Confidence 5667557999999998899999955 3445443322221 1222 3433444 4577766555677778864 4
Q ss_pred CcEEE
Q 006913 259 GNILW 263 (626)
Q Consensus 259 G~~~w 263 (626)
.+.+-
T Consensus 265 ~~~vg 269 (355)
T 3amr_A 265 NKYVA 269 (355)
T ss_dssp CCEEE
T ss_pred CcEEE
Confidence 44443
No 267
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=79.63 E-value=98 Score=35.95 Aligned_cols=152 Identities=9% Similarity=-0.003 Sum_probs=88.1
Q ss_pred eEEEEEEcCC-eEEEEEcCCeEEEEeCC-CcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcCCCeE
Q 006913 131 AGIAVSTSSS-SVYINVKGRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGEL 208 (626)
Q Consensus 131 I~s~~~d~dG-~LwIgT~~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~~GgL 208 (626)
|..+....++ .|-.|+.++.|..++.. ++..... . . ... ...+...+ +..|..++.++.|
T Consensus 20 V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~-------~------~---~~~-V~~l~fsp-g~~L~S~s~D~~v 81 (902)
T 2oaj_A 20 PIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKL-------E------D---RSA-IKEMRFVK-GIYLVVINAKDTV 81 (902)
T ss_dssp EEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEEC-------S------S---CCC-EEEEEEET-TTEEEEEETTCEE
T ss_pred cEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEc-------C------C---CCC-EEEEEEcC-CCEEEEEECcCeE
Confidence 4444444454 45567777778888865 4333221 0 0 011 13344453 4447777788899
Q ss_pred EEEeCCCCeEEEEEcCCCCCcceeeeeecCC-eEEEEEcCCCEEEEEECCCCcEEEEEe-------c--CCCCCceeeEE
Q 006913 209 YSLSAHSPYFNWIQDLSSFDKAFTLTPGNNG-YLYVTIPVRALVLALDTSSGNILWHKS-------V--GPLGSAEYAPV 278 (626)
Q Consensus 209 ~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG-~LwVGT~~gG~l~alD~~tG~~~w~~~-------~--~~l~~~~sspv 278 (626)
..+|.++++....... ...+.++....+| .|++|+ .++.+..+|..++....... . ..-...+.++.
T Consensus 82 ~lWd~~~~~~~~~~~~--~~~V~~v~~sp~g~~l~sgs-~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~ 158 (902)
T 2oaj_A 82 YVLSLYSQKVLTTVFV--PGKITSIDTDASLDWMLIGL-QNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQ 158 (902)
T ss_dssp EEEETTTCSEEEEEEC--SSCEEEEECCTTCSEEEEEE-TTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEE
T ss_pred EEEECCCCcEEEEEcC--CCCEEEEEECCCCCEEEEEc-CCCcEEEEECCCCccccceeccccccccccccCCCCeEEEE
Confidence 9999998876544331 1245666666666 566666 45788888988876531110 0 10011234566
Q ss_pred EeeC--CeEEEEEcCCeEEEEcCC-CCEE
Q 006913 279 VDSN--GWISVGSLDGLLYSFSPS-GVLN 304 (626)
Q Consensus 279 vD~d--G~IWVGT~~gGLy~~d~~-g~~~ 304 (626)
..++ +.+.+|+.++.+ .+|.. ++..
T Consensus 159 ~sp~~~~~l~~g~~dg~v-lWd~~~~~~~ 186 (902)
T 2oaj_A 159 WNPRDIGTVLISYEYVTL-TYSLVENEIK 186 (902)
T ss_dssp EETTEEEEEEEECSSCEE-EEETTTTEEE
T ss_pred EccCCCCEEEEEeCCCcE-EEECCCCceE
Confidence 6654 478888888888 99875 4433
No 268
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=78.47 E-value=66 Score=33.27 Aligned_cols=150 Identities=15% Similarity=0.052 Sum_probs=81.7
Q ss_pred eEEEEEEcCC-eEEEEEcCC---eEEEEeCC-CcEEEEECCcccccccccccccCCCCCccccceEEEcCCCe-EE-EEc
Q 006913 131 AGIAVSTSSS-SVYINVKGR---ALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGS-IY-ISN 203 (626)
Q Consensus 131 I~s~~~d~dG-~LwIgT~~g---GL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~-Lw-IGT 203 (626)
+..+....+| .|..++.++ .|+.+|.. |+....... . . ...++...+ +|. |. .+.
T Consensus 181 v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~-----~-----------~-~~~~~~~sp-dg~~la~~~~ 242 (415)
T 2hqs_A 181 LMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASF-----P-----------R-HNGAPAFSP-DGSKLAFALS 242 (415)
T ss_dssp EEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECC-----S-----------S-CEEEEEECT-TSSEEEEEEC
T ss_pred ceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecC-----C-----------C-cccCEEEcC-CCCEEEEEEe
Confidence 3344444455 465566543 78889975 665422100 0 0 123455554 554 55 344
Q ss_pred CC--CeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCCe-EEEEEcCCC--EEEEEECCCCcEEEEEecCCCCCceeeEE
Q 006913 204 TQ--GELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGY-LYVTIPVRA--LVLALDTSSGNILWHKSVGPLGSAEYAPV 278 (626)
Q Consensus 204 ~~--GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG~-LwVGT~~gG--~l~alD~~tG~~~w~~~~~~l~~~~sspv 278 (626)
.+ ..|+.+|.++++...... ....+..+....||+ |++++..++ .++.+|..++....... . ......+.
T Consensus 243 ~~g~~~i~~~d~~~~~~~~l~~--~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~-~--~~~~~~~~ 317 (415)
T 2hqs_A 243 KTGSLNLYVMDLASGQIRQVTD--GRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITW-E--GSQNQDAD 317 (415)
T ss_dssp TTSSCEEEEEETTTCCEEECCC--CSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCC-S--SSEEEEEE
T ss_pred cCCCceEEEEECCCCCEEeCcC--CCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEec-C--CCcccCeE
Confidence 33 349999999877643211 112344555566775 666664333 78888987776432111 1 12344577
Q ss_pred EeeCCe-EEEEEcC---CeEEEEcCC-CCE
Q 006913 279 VDSNGW-ISVGSLD---GLLYSFSPS-GVL 303 (626)
Q Consensus 279 vD~dG~-IWVGT~~---gGLy~~d~~-g~~ 303 (626)
..++|. |++++.+ ..|+.+|.. ++.
T Consensus 318 ~spdG~~l~~~~~~~g~~~i~~~d~~~~~~ 347 (415)
T 2hqs_A 318 VSSDGKFMVMVSSNGGQQHIAKQDLATGGV 347 (415)
T ss_dssp ECTTSSEEEEEEECSSCEEEEEEETTTCCE
T ss_pred ECCCCCEEEEEECcCCceEEEEEECCCCCE
Confidence 777775 5555543 468889875 444
No 269
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=78.41 E-value=68 Score=33.40 Aligned_cols=143 Identities=16% Similarity=0.233 Sum_probs=71.8
Q ss_pred CCeEEEEEc-CCeEEEEeCCCcEEEEECCcccccccccccccCCCCCccccceEEEcCCC----eEEEEcCC---CeE--
Q 006913 139 SSSVYINVK-GRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEG----SIYISNTQ---GEL-- 208 (626)
Q Consensus 139 dG~LwIgT~-~gGL~a~d~~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG----~LwIGT~~---GgL-- 208 (626)
...++++|. .+||+.||.+|+.+-.+.. + + .++ +-..+-..- +| .+++.... +.|
T Consensus 39 ~~s~ii~t~k~~gL~Vydl~G~~l~~~~~-----g-~---~nn-----VD~r~~~~l-~g~~~dla~as~R~~~~n~l~v 103 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSLDGKMLHSYNT-----G-K---LNN-----VDIRYDFPL-NGKKVDIAAASNRSEGKNTIEI 103 (355)
T ss_dssp GGCEEEEEETTTEEEEEETTSCEEEEECC-----S-C---EEE-----EEEEEEEEE-TTEEEEEEEEEECSTTCCEEEE
T ss_pred CccEEEEEcCCCCEEEEcCCCcEEEEccC-----C-C---ccc-----EEEeccccc-CCceEeEEEEeCCCCCCCeEEE
Confidence 344566664 4799999999988765411 0 0 011 111111110 11 23444332 344
Q ss_pred EEEeCCCCeEEEEEcC--C--C-CCcce--eeeeec-CCe--EEEEEcCCCEEEEEEC---CCC----cEEEEEecCCCC
Q 006913 209 YSLSAHSPYFNWIQDL--S--S-FDKAF--TLTPGN-NGY--LYVTIPVRALVLALDT---SSG----NILWHKSVGPLG 271 (626)
Q Consensus 209 ~~ld~~tg~~~w~~~~--~--s-~~~v~--sI~~D~-dG~--LwVGT~~gG~l~alD~---~tG----~~~w~~~~~~l~ 271 (626)
|.+|+.++.+.-.... + . ...+. |++.+. .|. +||... .+.+.-++. .+| +....+..+.
T Consensus 104 f~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k-~G~~~q~~l~~~~~g~~~~~lVR~f~lgs-- 180 (355)
T 3amr_A 104 YAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGK-EGEFEQYELKADKNGYISGKKVRAFKMNS-- 180 (355)
T ss_dssp EEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECS-SSEEEEEEEEECTTSCEEEEEEEEEECSS--
T ss_pred EEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECC-CCeEEEEEEEeCCCCcccceEEEEecCCC--
Confidence 5558777664332111 1 1 12233 343354 353 555543 345443322 333 2334444442
Q ss_pred CceeeEEEe-eCCeEEEEEcCCeEEEEcCC
Q 006913 272 SAEYAPVVD-SNGWISVGSLDGLLYSFSPS 300 (626)
Q Consensus 272 ~~~sspvvD-~dG~IWVGT~~gGLy~~d~~ 300 (626)
..-.+++| ..|.||++-++.||++|+.+
T Consensus 181 -q~EgcvvDd~~g~Lyv~eEd~GIw~~da~ 209 (355)
T 3amr_A 181 -QTEGMAADDEYGRLYIAEEDEAIWKFSAE 209 (355)
T ss_dssp -CEEEEEEETTTTEEEEEETTTEEEEEECS
T ss_pred -CcceEEEcCCCCeEEEecccceEEEEeCC
Confidence 23456676 46999999999999999943
No 270
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=78.27 E-value=62 Score=32.85 Aligned_cols=86 Identities=13% Similarity=0.102 Sum_probs=55.0
Q ss_pred eEEEcCCCeEEEEcC-----------CCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCC-eEEEEEcCCCEEEEEECC
Q 006913 190 PVIDQCEGSIYISNT-----------QGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNG-YLYVTIPVRALVLALDTS 257 (626)
Q Consensus 190 pviD~~dG~LwIGT~-----------~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG-~LwVGT~~gG~l~alD~~ 257 (626)
+.+++.++.+|++.. .+.|..+|.++++..-..+.+. ...++.+.|| .||++. . +.+..+|..
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~---p~~ia~spdg~~l~v~n-~-~~v~v~D~~ 333 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD---ALSMTIDQQRNLMLTLD-G-GNVNVYDIS 333 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT---CCEEEEETTTTEEEEEC-S-SCEEEEECS
T ss_pred EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC---eeEEEECCCCCEEEEeC-C-CeEEEEECC
Confidence 345543588998753 2369999999988765544333 5667777777 566654 4 788889999
Q ss_pred CC--cEEEEE-ecCCCCCceeeEEEeeCC
Q 006913 258 SG--NILWHK-SVGPLGSAEYAPVVDSNG 283 (626)
Q Consensus 258 tG--~~~w~~-~~~~l~~~~sspvvD~dG 283 (626)
++ +.+-.. ..+ .....+.++++|
T Consensus 334 t~~l~~~~~i~~~G---~~P~~~~~~p~G 359 (361)
T 2oiz_A 334 QPEPKLLRTIEGAA---EASLQVQFHPVG 359 (361)
T ss_dssp SSSCEEEEEETTSC---SSEEEEEECCCS
T ss_pred CCcceeeEEeccCC---CCcEEEEecCCC
Confidence 99 766443 222 223335555554
No 271
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=77.68 E-value=61 Score=32.51 Aligned_cols=75 Identities=9% Similarity=0.057 Sum_probs=44.4
Q ss_pred cceeeeeecCCe-EEEEEcCCCEEEEEECC-CCcEEEE--EecCCCCCceeeEEEeeCC-eEEEEEc-CCeEEEE--cC-
Q 006913 229 KAFTLTPGNNGY-LYVTIPVRALVLALDTS-SGNILWH--KSVGPLGSAEYAPVVDSNG-WISVGSL-DGLLYSF--SP- 299 (626)
Q Consensus 229 ~v~sI~~D~dG~-LwVGT~~gG~l~alD~~-tG~~~w~--~~~~~l~~~~sspvvD~dG-~IWVGT~-~gGLy~~--d~- 299 (626)
.+..+..+.||+ ||++....+.+..++.. +|+.... ......+.....+.++++| .+|++.. ++.+..+ +.
T Consensus 146 ~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~ 225 (365)
T 1jof_A 146 GIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPA 225 (365)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred cceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCC
Confidence 355667778885 77766444678878876 7776432 2211001224556788888 6888875 4556555 44
Q ss_pred CCCE
Q 006913 300 SGVL 303 (626)
Q Consensus 300 ~g~~ 303 (626)
+|+.
T Consensus 226 ~g~~ 229 (365)
T 1jof_A 226 THMP 229 (365)
T ss_dssp TCCE
T ss_pred CCcE
Confidence 3654
No 272
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=77.39 E-value=58 Score=32.04 Aligned_cols=181 Identities=13% Similarity=0.141 Sum_probs=90.3
Q ss_pred eEEEEECCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEc------C------CeEEEEeCC
Q 006913 90 EVYIVAENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVK------G------RALFAFMTH 157 (626)
Q Consensus 90 ~IwVgT~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~------~------gGL~a~d~~ 157 (626)
.|++-..+.++++|+.++ .|.....+.+ ...........++.||+..- . ..+++||+.
T Consensus 6 ~l~~~GG~~~~~yd~~~~-------~W~~~~~~~p---~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~ 75 (315)
T 4asc_A 6 LIFMISEEGAVAYDPAAN-------ECYCASLSSQ---VPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHL 75 (315)
T ss_dssp EEEEEETTEEEEEETTTT-------EEEEEECCCC---SCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETT
T ss_pred EEEEEcCCceEEECCCCC-------eEecCCCCCC---CCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCC
Confidence 455544578999999886 4543211111 01122333345777776421 0 127788876
Q ss_pred CcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcC---------CCeEEEEeCCCCeEEEEEcCC--C
Q 006913 158 GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNT---------QGELYSLSAHSPYFNWIQDLS--S 226 (626)
Q Consensus 158 G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~---------~GgL~~ld~~tg~~~w~~~~~--s 226 (626)
.. .|..-+ .++ ... . ..+.+.. ++.||+-.. ...+++||+.+++ |..-.. .
T Consensus 76 ~~-~W~~~~---~~p------~~r---~-~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~--W~~~~~~p~ 137 (315)
T 4asc_A 76 DS-EWLGMP---PLP------SPR---C-LFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFK--WGESDPLPY 137 (315)
T ss_dssp TT-EEEECC---CBS------SCE---E-SCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTE--EEECCCCSS
T ss_pred CC-eEEECC---CCC------cch---h-ceeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCc--EeECCCCCC
Confidence 33 376311 111 000 0 1122333 678886432 1348899998864 764322 1
Q ss_pred CCcceeeeeecCCeEEEEEcC------CCEEEEEECCCCcEEEEEecC-CCCCceeeEEEeeCCeEEEE-EcC-----Ce
Q 006913 227 FDKAFTLTPGNNGYLYVTIPV------RALVLALDTSSGNILWHKSVG-PLGSAEYAPVVDSNGWISVG-SLD-----GL 293 (626)
Q Consensus 227 ~~~v~sI~~D~dG~LwVGT~~------gG~l~alD~~tG~~~w~~~~~-~l~~~~sspvvD~dG~IWVG-T~~-----gG 293 (626)
.....+.+. .++.|||-.-. ...++.+|+.++ .|..... +......+.+.. ++.||+- ..+ ..
T Consensus 138 ~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~ 213 (315)
T 4asc_A 138 VVYGHTVLS-HMDLVYVIGGKGSDRKCLNKMCVYDPKKF--EWKELAPMQTARSLFGATVH-DGRIIVAAGVTDTGLTSS 213 (315)
T ss_dssp CCBSCEEEE-ETTEEEEECCBCTTSCBCCCEEEEETTTT--EEEECCCCSSCCBSCEEEEE-TTEEEEEEEECSSSEEEE
T ss_pred cccceeEEE-ECCEEEEEeCCCCCCcccceEEEEeCCCC--eEEECCCCCCchhceEEEEE-CCEEEEEeccCCCCccce
Confidence 111122222 47788886411 124788898766 5654222 111122223333 6788873 332 25
Q ss_pred EEEEcCCCC
Q 006913 294 LYSFSPSGV 302 (626)
Q Consensus 294 Ly~~d~~g~ 302 (626)
+++||+...
T Consensus 214 ~~~yd~~~~ 222 (315)
T 4asc_A 214 AEVYSITDN 222 (315)
T ss_dssp EEEEETTTT
T ss_pred EEEEECCCC
Confidence 889988654
No 273
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=77.20 E-value=1e+02 Score=34.87 Aligned_cols=207 Identities=15% Similarity=0.140 Sum_probs=102.2
Q ss_pred cccCeEEecC--CeEEEEE-CCeEEEEECCCCccccceeEEEecCC-CCCCC-CCCeeEEEEEE--cCCeEEEEEc----
Q 006913 79 IGTAPVHGGT--GEVYIVA-ENRVLKVDLLKIGTSESATQVFYGTG-SGKGG-TGAIAGIAVST--SSSSVYINVK---- 147 (626)
Q Consensus 79 i~~sp~iD~d--G~IwVgT-~ggL~~id~~~~~~~~~~~~~~~~~~-~~~~~-~~~~I~s~~~d--~dG~LwIgT~---- 147 (626)
.+..+.++.. +.||+++ .++|++-+..+. .|..-.. ..... ....+..+..+ ..+.||+++.
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~G~-------tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~ 96 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWDPSTE-------TWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTN 96 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEETTTT-------EEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSS
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeCCCCC-------CEEECcCccCcccccCCCcceEEeCCCCCCEEEEEeccccc
Confidence 4455666543 7899998 689999876553 3432111 00000 01234555555 3568999873
Q ss_pred -----CCeEEEEeCCCcEEEEECCcccccccccccccCCCCCccccceEEEcC-CCeEEEEcCC-CeEEEEeCCCCeEEE
Q 006913 148 -----GRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQC-EGSIYISNTQ-GELYSLSAHSPYFNW 220 (626)
Q Consensus 148 -----~gGL~a~d~~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~-dG~LwIGT~~-GgL~~ld~~tg~~~w 220 (626)
..+|++-.-.|+ .|.... .+...+ .+..+..+...+++++. .+.||+++.. .+|++ ..++| ..|
T Consensus 97 ~~~~~~~~l~~S~DgG~-TW~~~~----~~~~~~--~~~~g~~~~~~l~~~p~~~~~v~~g~~~g~gl~~-S~DgG-~tW 167 (737)
T 2cn3_A 97 DWLPNMGAILRSTDRGE-TWEKTI----LPFKMG--GNMPGRSMGERLAIDPNDNRILYLGTRCGNGLWR-STDYG-VTW 167 (737)
T ss_dssp SSSCCCCEEEEESSSSS-SCEEEE----CSSCCC--TTSTTTTSCCCEEECSSCTTCEEEECSTTCCEEE-ESSTT-SSC
T ss_pred ccccCCccEEEeCCCCC-CcccCC----CCcccC--CCcCcccccceEEECCCCCCEEEEeeccCCcEEE-eCCCC-cce
Confidence 245544432354 465310 010000 00001111134566532 3789999854 56774 45554 346
Q ss_pred EEcCC--CC---------------Ccceeeeeec--------CCeEEEEEcCCC-EEEEEECCCCcEEEEEecCCCC-Cc
Q 006913 221 IQDLS--SF---------------DKAFTLTPGN--------NGYLYVTIPVRA-LVLALDTSSGNILWHKSVGPLG-SA 273 (626)
Q Consensus 221 ~~~~~--s~---------------~~v~sI~~D~--------dG~LwVGT~~gG-~l~alD~~tG~~~w~~~~~~l~-~~ 273 (626)
..... .. ..+..+..|. .++||+++.+++ .++.- .+|-..|....+... ..
T Consensus 168 ~~~~~~~~~~~~~~~p~~~~~~~~~g~~~v~~dp~~~~~~~~~~~v~~~~~~~~~~v~~S--~DgG~tW~~~~~~p~~~~ 245 (737)
T 2cn3_A 168 SKVESFPNPGTYIYDPNFDYTKDIIGVVWVVFDKSSSTPGNPTKTIYVGVADKNESIYRS--TDGGVTWKAVPGQPKGLL 245 (737)
T ss_dssp EECTTCCCCCCCBSCTTSTTTCSBCCEEEEEECGGGSCTTSCCSCEEEEESCSSCCEEEE--SSTTSCCEECTTCCCSSE
T ss_pred ecccCCCCCcccccCcccccccCCCCEEEEEcCCCCcccCCCCCEEEEEecCCCccEEEE--cCCCCceEECCCCCCccc
Confidence 64321 00 0122344543 248999985332 35432 344455765332111 12
Q ss_pred eeeEEEeeCCeEEEEE----------cCCeEEEEcCCCCE
Q 006913 274 EYAPVVDSNGWISVGS----------LDGLLYSFSPSGVL 303 (626)
Q Consensus 274 ~sspvvD~dG~IWVGT----------~~gGLy~~d~~g~~ 303 (626)
....++++++.+|+.. ..++||+.+..|..
T Consensus 246 ~~~~~~~~~~~l~~~~~d~~g~y~~~~~g~v~~s~d~G~t 285 (737)
T 2cn3_A 246 PHHGVLASNGMLYITYGDTCGPYDGNGKGQVWKFNTRTGE 285 (737)
T ss_dssp EEEEEECTTSEEEEEEESSCCSSCCSCCEEEEEEETTTCC
T ss_pred ceEEEECCCCeEEEEecCCCCccccccCceEEEEeCCCCC
Confidence 2234556688999864 34578888765544
No 274
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=75.81 E-value=1.3e+02 Score=35.28 Aligned_cols=101 Identities=12% Similarity=0.124 Sum_probs=60.0
Q ss_pred CCeEEEEcCCCeEE-EEeCCCCeEEEEEcCCCCCcceeeeeecCCe-EEEEEcCCCEEEEEECCCCcEEEEEecCCCCCc
Q 006913 196 EGSIYISNTQGELY-SLSAHSPYFNWIQDLSSFDKAFTLTPGNNGY-LYVTIPVRALVLALDTSSGNILWHKSVGPLGSA 273 (626)
Q Consensus 196 dG~LwIGT~~GgL~-~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG~-LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~~ 273 (626)
+..|+.++.++.|+ .++..+++..-.. .....+..+....||+ |.++. ..+.++.+|..+|+........ ...
T Consensus 348 g~~l~~~s~~~~l~~~~d~~~~~~~~l~--~~~~~~~~~~~SpDG~~la~~~-~~~~v~~~d~~tg~~~~~~~~~--~~~ 422 (1045)
T 1k32_A 348 KVAFIHGTREGDFLGIYDYRTGKAEKFE--ENLGNVFAMGVDRNGKFAVVAN-DRFEIMTVDLETGKPTVIERSR--EAM 422 (1045)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEECC--CCCCSEEEEEECTTSSEEEEEE-TTSEEEEEETTTCCEEEEEECS--SSC
T ss_pred CCeEEEEECCCceEEEEECCCCCceEec--CCccceeeeEECCCCCEEEEEC-CCCeEEEEECCCCceEEeccCC--CCC
Confidence 34455555567788 8888887654322 2222345566667775 54555 4568999999999876544222 112
Q ss_pred eeeEEEeeCCe-EEEEEcC----------CeEEEEcCCC
Q 006913 274 EYAPVVDSNGW-ISVGSLD----------GLLYSFSPSG 301 (626)
Q Consensus 274 ~sspvvD~dG~-IWVGT~~----------gGLy~~d~~g 301 (626)
+..+...+||. |.+++.+ +.|+.+|..+
T Consensus 423 v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~ 461 (1045)
T 1k32_A 423 ITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEG 461 (1045)
T ss_dssp CCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTT
T ss_pred ccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCC
Confidence 34566777775 4444432 3788888764
No 275
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=75.36 E-value=70 Score=32.02 Aligned_cols=221 Identities=12% Similarity=0.006 Sum_probs=114.3
Q ss_pred eeeeeEEeeCCEEEE-EeCCcEEEEcC-CCCEEEEEeCCCCCCcccCeEEecCCe-EEEE-E-CCeEEEEECCCCccccc
Q 006913 38 RLSKPLIGEDGKIYA-CSEKTLFAFES-NGTIAWSLDLDFTCNIGTAPVHGGTGE-VYIV-A-ENRVLKVDLLKIGTSES 112 (626)
Q Consensus 38 ~~Sspvid~dG~IwI-gSdggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~dG~-IwVg-T-~ggL~~id~~~~~~~~~ 112 (626)
...+.....+|.+.+ |+++++..++. ++.......... ........+++ +.+. . ++.|...|..++..
T Consensus 21 ~V~~v~fs~dg~~la~g~~~~~~iw~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~--- 93 (355)
T 3vu4_A 21 PVTDYEFNQDQSCLILSTLKSFEIYNVHPVAHIMSQEMRH----LSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQD--- 93 (355)
T ss_dssp CCCEEEECTTSSEEEEECSSEEEEEEETTEEEEEEEECSC----CCEEEECTTSSEEEEECSSTTEEEEEETTTTEE---
T ss_pred ceEEEEECCCCCEEEEEcCCEEEEEecCCcceeeeeecCC----eEEEEEcCCCCEEEEEECCccEEEEEECCCCcE---
Confidence 344455556777665 44677777776 444443333221 11122223333 3333 3 56888889877631
Q ss_pred eeEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEcCCeEEEEeCC-C-cEEEEECCcccccccccccccCCCCCccccce
Q 006913 113 ATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKGRALFAFMTH-G-QLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVP 190 (626)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~~gGL~a~d~~-G-~~~w~~~~~~~~~~~~~~~~~~l~~~~i~ssp 190 (626)
...+.. .. .+..+.. ....+.++. ++.+..+|.. + +.+..+ . . .....
T Consensus 94 --~~~~~~------~~-~v~~v~~-~~~~~~~~~-~~~i~i~d~~~~~~~~~~~-------~------~------~~~~~ 143 (355)
T 3vu4_A 94 --VSRIKV------DA-PVKDLFL-SREFIVVSY-GDVISVFKFGNPWKRITDD-------I------R------FGGVC 143 (355)
T ss_dssp --EEEEEC------SS-CEEEEEE-CSSEEEEEE-TTEEEEEESSTTCCBSSCC-------E------E------EEEEE
T ss_pred --EEEEEC------CC-ceEEEEE-cCCEEEEEE-cCEEEEEECCCCceeeEEe-------c------c------CCceE
Confidence 111111 11 2333322 334455554 4678778764 3 221110 0 0 00011
Q ss_pred EEEcCCCeEEE--EcCCCeEEEEeCCCCe-----------------EEEEEcCCCCCcceeeeeecCCeEEEEEcCCCE-
Q 006913 191 VIDQCEGSIYI--SNTQGELYSLSAHSPY-----------------FNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRAL- 250 (626)
Q Consensus 191 viD~~dG~LwI--GT~~GgL~~ld~~tg~-----------------~~w~~~~~s~~~v~sI~~D~dG~LwVGT~~gG~- 250 (626)
.+. .+.+.+ |..+|.|..+|.+++. ..... .....+.++....+|.+.+....++.
T Consensus 144 ~~s--~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~--~h~~~v~~~~~s~~g~~l~s~s~d~~~ 219 (355)
T 3vu4_A 144 EFS--NGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIK--AHTNPIKMVRLNRKSDMVATCSQDGTI 219 (355)
T ss_dssp EEE--TTEEEEEESSCTTCEEEEECCC------------------CCEEEC--CCSSCEEEEEECTTSSEEEEEETTCSE
T ss_pred EEE--ccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEE--ccCCceEEEEECCCCCEEEEEeCCCCE
Confidence 222 244444 4667888888888754 11111 11234667777778865544434565
Q ss_pred EEEEECCCCcEEEEEecCCCCCceeeEEEeeCCe-EEEEEcCCeEEEEcC
Q 006913 251 VLALDTSSGNILWHKSVGPLGSAEYAPVVDSNGW-ISVGSLDGLLYSFSP 299 (626)
Q Consensus 251 l~alD~~tG~~~w~~~~~~l~~~~sspvvD~dG~-IWVGT~~gGLy~~d~ 299 (626)
+...|..+++.......+.....+.++...++|. |..|+.++.|..+|.
T Consensus 220 v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~ 269 (355)
T 3vu4_A 220 IRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEI 269 (355)
T ss_dssp EEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEES
T ss_pred EEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEc
Confidence 8888999998876655220122355677776765 566778888888885
No 276
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=75.04 E-value=74 Score=32.11 Aligned_cols=191 Identities=9% Similarity=-0.074 Sum_probs=101.8
Q ss_pred eEEEEEEcCCe-EEEEE--cCCeEEEEeCC-CcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcCCC
Q 006913 131 AGIAVSTSSSS-VYINV--KGRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQG 206 (626)
Q Consensus 131 I~s~~~d~dG~-LwIgT--~~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~~G 206 (626)
+..+....||+ +.+++ .++-|..+|.. ++.+..... ... ..++...+ +|.+.+...++
T Consensus 136 ~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~----------------~~~-V~~v~fsp-dg~~l~s~s~~ 197 (365)
T 4h5i_A 136 TKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIET----------------RGE-VKDLHFST-DGKVVAYITGS 197 (365)
T ss_dssp EEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEEC----------------SSC-CCEEEECT-TSSEEEEECSS
T ss_pred EEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCC----------------CCc-eEEEEEcc-CCceEEeccce
Confidence 44444556666 44565 34557778875 766554310 011 13345554 66665555566
Q ss_pred eEEEEeCCCCeEEEEEcCC-CCCcceeeeeecCCeEEE-EEcCCC---EEEEEECCCCcEEE--EEecCCCCCceeeEEE
Q 006913 207 ELYSLSAHSPYFNWIQDLS-SFDKAFTLTPGNNGYLYV-TIPVRA---LVLALDTSSGNILW--HKSVGPLGSAEYAPVV 279 (626)
Q Consensus 207 gL~~ld~~tg~~~w~~~~~-s~~~v~sI~~D~dG~LwV-GT~~gG---~l~alD~~tG~~~w--~~~~~~l~~~~sspvv 279 (626)
++..++..++......... ....+.++....+|...+ ++.+++ .+...+...+.... ..........+.++.+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~ 277 (365)
T 4h5i_A 198 SLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDV 277 (365)
T ss_dssp CEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEE
T ss_pred eEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEE
Confidence 7888888877655433222 122355566666775544 333222 34444443443211 1111111123556777
Q ss_pred eeCCe-EEEEEcCCeEEEEcCC-CCEEEEeeccCCCCccccCceEEEEEEecCCcEEEEEeeecCeeEEe
Q 006913 280 DSNGW-ISVGSLDGLLYSFSPS-GVLNKFSKSDTSDSVIQSSPYWFHLLGPSIGLKAILCLMVVGQFSSL 347 (626)
Q Consensus 280 D~dG~-IWVGT~~gGLy~~d~~-g~~~~~~~~~~~~~~ilssp~V~~Il~DsdG~IwI~T~t~~Ggl~~~ 347 (626)
.++|. |..|+.++.|..+|.. ++....... .....|.++....+|.+. .+++..+-+...
T Consensus 278 Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~-------gH~~~V~~v~fSpdg~~l-aS~S~D~tvrvw 339 (365)
T 4h5i_A 278 DMKGELAVLASNDNSIALVKLKDLSMSKIFKQ-------AHSFAITEVTISPDSTYV-ASVSAANTIHII 339 (365)
T ss_dssp CTTSCEEEEEETTSCEEEEETTTTEEEEEETT-------SSSSCEEEEEECTTSCEE-EEEETTSEEEEE
T ss_pred CCCCCceEEEcCCCEEEEEECCCCcEEEEecC-------cccCCEEEEEECCCCCEE-EEEeCCCeEEEE
Confidence 77775 5568888999999974 655443221 123346777777788764 566555555443
No 277
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=74.58 E-value=22 Score=37.15 Aligned_cols=103 Identities=9% Similarity=-0.146 Sum_probs=67.6
Q ss_pred CCeEEEEcCCC-----eEEEEeCCCCeEEEEEcCCCCCcceeeeeecCC-eEEEEEc---------CCCEEEEEECCCCc
Q 006913 196 EGSIYISNTQG-----ELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNG-YLYVTIP---------VRALVLALDTSSGN 260 (626)
Q Consensus 196 dG~LwIGT~~G-----gL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG-~LwVGT~---------~gG~l~alD~~tG~ 260 (626)
...+|+..... .+..+|.+++++.-..+.+.. . .+..+.|| .+||+.. .++.+..+|+.+++
T Consensus 31 ~~~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~--P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~ 107 (368)
T 1mda_H 31 SRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFL--S-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFL 107 (368)
T ss_dssp TTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTT--C-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCC
T ss_pred CCeEEEECCccCCccceEEEEECCCCeEEEEEeCCCC--C-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCC
Confidence 46788876532 688999999988765554432 2 56677676 7999863 23578899999999
Q ss_pred EEEEEecCC-C----CCceeeEEEeeCC-eEEEEEcC--CeEEE--EcCCC
Q 006913 261 ILWHKSVGP-L----GSAEYAPVVDSNG-WISVGSLD--GLLYS--FSPSG 301 (626)
Q Consensus 261 ~~w~~~~~~-l----~~~~sspvvD~dG-~IWVGT~~--gGLy~--~d~~g 301 (626)
.......+. . +.....+.+++|| ++||+... +.+.. +|...
T Consensus 108 vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 108 PIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp EEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred EEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence 887765431 0 0112345666666 79998753 35666 67533
No 278
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=74.08 E-value=50 Score=37.80 Aligned_cols=184 Identities=12% Similarity=0.133 Sum_probs=86.4
Q ss_pred CCEEEEEe---CCcEEEEcCCCCEEEEEeCCCCCCcccCeEEec--CCeEEEEECCeEEEEECCCCccccceeEEEecCC
Q 006913 47 DGKIYACS---EKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGG--TGEVYIVAENRVLKVDLLKIGTSESATQVFYGTG 121 (626)
Q Consensus 47 dG~IwIgS---dggL~a~d~~G~~~W~~~~~~~~~i~~sp~iD~--dG~IwVgT~ggL~~id~~~~~~~~~~~~~~~~~~ 121 (626)
...+|+++ ++.|++-...|+ .|....... .....+.+|. .+.+|++++++||+- .+.+. .|.....
T Consensus 556 ~~~~~~~~~~~~~~v~~S~D~G~-tW~~~~~l~-~~~~~i~~d~~~~~~~y~g~~g~v~~S-~DgG~------tW~~~~~ 626 (763)
T 3a0f_A 556 KTFVWSPSKADGKGPYTSSDYGK-TWTAPSGLS-KQTTGIAADRVQANTFYVYVEGDFFVS-TDGGK------SYTKKGN 626 (763)
T ss_dssp SCEEEECSSCCSSCCEEESSTTS-CCBCCBSCC-CCCSCEEECSSSTTCEEEEETTEEEEE-SSTTS------BCEEECB
T ss_pred CcEEEEecccCCCceEEeCCCCC-CCeecCCCC-CCcceEEEeccCCCEEEEEcCCCEEEE-eCCCc------Ccccccc
Confidence 34789988 556665543443 464321110 1112344443 467999988888764 44443 2321110
Q ss_pred CCCC-CCCCeeEEEEE-EcCCeEEEEEcCCeEEEEeCCCcEEEEECCcccccccccccccCCCCCccccceEE-EcCCCe
Q 006913 122 SGKG-GTGAIAGIAVS-TSSSSVYINVKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVI-DQCEGS 198 (626)
Q Consensus 122 ~~~~-~~~~~I~s~~~-d~dG~LwIgT~~gGL~a~d~~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspvi-D~~dG~ 198 (626)
..+. .....+ ..+. ..++.||+++..++|+.-+-.|+ .|..-. .+ ........+....+. +...+.
T Consensus 627 ~lp~~~~~~~~-i~~~~~~~~~l~~~~~~~~l~~S~D~G~-tW~~~~---~~------~~~~~~~~~~~g~~~~~~~~~~ 695 (763)
T 3a0f_A 627 GLPCCWTYTGT-PVTSNLRAGELWVSVKGVGIYHSTDFGN-TFTALA---GS------GSSLNPAVFSIGAPQTPNATET 695 (763)
T ss_dssp TSCCSSCCCEE-EEECSSSTTCEEEEETTTEEEEESSTTS-BCEECT---TB------TTTBEEEEEEEECCSSTTSSCE
T ss_pred CCCcccCcccc-EEECCCCCCcEEEEcCCCeEEEEcCCCC-CceEcc---CC------CcccccceeEEeeecCCCCCce
Confidence 0000 011111 1111 25689999998778876554455 465310 00 000000000000011 111456
Q ss_pred EEEEc-----CCCeEEEEeCCCCeEEEEEcCC---CCCcceeeeee--cCCeEEEEEcCCCEEE
Q 006913 199 IYISN-----TQGELYSLSAHSPYFNWIQDLS---SFDKAFTLTPG--NNGYLYVTIPVRALVL 252 (626)
Q Consensus 199 LwIGT-----~~GgL~~ld~~tg~~~w~~~~~---s~~~v~sI~~D--~dG~LwVGT~~gG~l~ 252 (626)
||+.. ..++||+= .+.| ..|..-.. ....+..+..+ ..++||++|..+|.++
T Consensus 696 l~~~G~~~~~~~~gl~~S-~D~G-~tW~~~~~~~~~~~~~~~i~~~p~~~~~v~~~T~GrGi~~ 757 (763)
T 3a0f_A 696 LFLWGIPSASQPEGLYMS-TDNG-GLWTRLNDDAHNYGGATVISGDPRIYGRVYIGMNGRGIIC 757 (763)
T ss_dssp EEEEEECSTTSCSEEEEE-SSTT-SCCEECSCTTCCTBCEEEEEECTTSTTEEEEEEBSSCEEE
T ss_pred EEEEEEcccCCCcEEEEe-CCCC-CCcEeccCccccCCCcceEEeCCCCCCEEEEeCCCCeEEE
Confidence 88754 46778864 3444 34765431 22233345555 3568999997554443
No 279
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=73.24 E-value=80 Score=31.67 Aligned_cols=176 Identities=15% Similarity=0.136 Sum_probs=94.9
Q ss_pred eEEecCCeEEEEE---CCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEcC-----------
Q 006913 83 PVHGGTGEVYIVA---ENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVKG----------- 148 (626)
Q Consensus 83 p~iD~dG~IwVgT---~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~~----------- 148 (626)
.++..++.||+.. +++||+++.++... .++.- .... -+...++.||.....
T Consensus 20 ~~~~~g~~iy~~n~~d~~~ly~~~~dg~~~----~~l~~----------~~~~-~i~~~g~~Iyy~~~~~~~~~~~~~~~ 84 (302)
T 3s25_A 20 LFCESDGEVFFSNTNDNGRLYAMNIDGSNI----HKLSN----------DTAM-YINADKNYVYYVRNNNQKITSQTFFS 84 (302)
T ss_dssp CEEEETTEEEEEEGGGTTEEEEEETTSCSC----EEEEE----------EEEE-EEEECSSEEEEEEECC------CCSS
T ss_pred EEEEeCCEEEEEeCCCCceEEEEcCCCCCC----EEccC----------Ccee-eEEEcCCEEEEEECCCCcccccceec
Confidence 3444567888875 57899998876421 11110 0111 123356677776543
Q ss_pred ---CeEEEEeCCCcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEc----CCCeEEEEeCCCCeEEEE
Q 006913 149 ---RALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISN----TQGELYSLSAHSPYFNWI 221 (626)
Q Consensus 149 ---gGL~a~d~~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT----~~GgL~~ld~~tg~~~w~ 221 (626)
..|+.++.+|....... . . ......++ ++.||... .+..|++++.++....-.
T Consensus 85 ~n~~~Iy~i~~dg~~~~~l~----~---------~-----~~~~~s~~--g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~l 144 (302)
T 3s25_A 85 YDRNSLCRIKRNGHGSTVLD----P---------D-----PCIYASLI--GNYIYYLHYDTQTATSLYRIRIDGEEKKKI 144 (302)
T ss_dssp CCSEEEEEEETTSCCCEEEE----C---------S-----CEEEEEEE--TTEEEEEEESSSSCEEEEEEETTSCCCEEE
T ss_pred cCCCeEEEEeCCCCcceEee----c---------C-----CccEEEEe--CCEEEEEeecCCCCceEEEEECCCCCeEEE
Confidence 35888888754322220 0 0 01123445 77888765 466899999987554332
Q ss_pred EcCCCCCcceeeeeecCCeEEEEEcCCCEEEEEECCCCcEEEEEecCCCCCceeeEEEeeCCeEEEEEcC--CeEEEEcC
Q 006913 222 QDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPVVDSNGWISVGSLD--GLLYSFSP 299 (626)
Q Consensus 222 ~~~~s~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~~~sspvvD~dG~IWVGT~~--gGLy~~d~ 299 (626)
..... ..+-.+ .+.||....+...++.++..++... ....+ . ...|+.-..+.||....+ ..|++.+.
T Consensus 145 t~~~~----~~~~~~-g~~iy~t~~g~~~Iy~~~l~g~~~~-~l~~~---~-~~~~~~P~g~~iy~t~~~~~~~I~~~~l 214 (302)
T 3s25_A 145 KNHYL----FTCNTS-DRYFYYNNPKNGQLYRYDTASQSEA-LFYDC---N-CYKPVVLDDTNVYYMDVNRDNAIVHVNI 214 (302)
T ss_dssp ESSCC----CCSEEE-TTEEEEECTTTCCEEEEETTTTEEE-EEECS---C-EEEEEEEETTEEEEEEGGGTTEEEEECS
T ss_pred eCCCc----eEeeEE-CCEEEEEeCCCceEEEEECCCCCEE-EEeCC---C-ccceeeecCCEEEEEEcCCCcEEEEEEC
Confidence 22111 112223 4567766544567888886555433 22112 1 122433137788887644 36999988
Q ss_pred CCCE
Q 006913 300 SGVL 303 (626)
Q Consensus 300 ~g~~ 303 (626)
+|..
T Consensus 215 dG~~ 218 (302)
T 3s25_A 215 NNPN 218 (302)
T ss_dssp SSCC
T ss_pred CCCC
Confidence 7654
No 280
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=72.09 E-value=1.4e+02 Score=33.99 Aligned_cols=248 Identities=16% Similarity=0.142 Sum_probs=120.5
Q ss_pred CceeeeeEEee--CCEEEEEe-CCcEEEEcCCCCEEEEEeCCCC-----------CCcccCeEEec--CCeEEEEEC---
Q 006913 36 AFRLSKPLIGE--DGKIYACS-EKTLFAFESNGTIAWSLDLDFT-----------CNIGTAPVHGG--TGEVYIVAE--- 96 (626)
Q Consensus 36 ~~~~Sspvid~--dG~IwIgS-dggL~a~d~~G~~~W~~~~~~~-----------~~i~~sp~iD~--dG~IwVgT~--- 96 (626)
+....+.+++. .+.+|+++ .++|++-+..|+ .|....... ..-+.++.+|. .+.+|+++.
T Consensus 20 ~g~i~~i~~~p~~~~~~y~~~~~ggv~~S~DgG~-tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g~~~ 98 (763)
T 3a0f_A 20 GGFISGLVAHPTEKDLIYARTDIGGTYRWNAAKW-EWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQGDYV 98 (763)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEETTTT-EEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEECSCT
T ss_pred CCceeEEEeCCCCCCEEEEEeccCcEEEECCCCC-CeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEecccc
Confidence 34555666654 35799988 678888775555 676543210 01133455554 468999873
Q ss_pred -----CeEEEEECCCCccccceeEEEecCCCCCCCCCCee-EEEEEE--cCCeEEEEEcCCeEEEEeCCCcEEEEECCcc
Q 006913 97 -----NRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIA-GIAVST--SSSSVYINVKGRALFAFMTHGQLLWSAGPVL 168 (626)
Q Consensus 97 -----ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I-~s~~~d--~dG~LwIgT~~gGL~a~d~~G~~~w~~~~~~ 168 (626)
++|++ ..+.++ .|... ...........+..+ ..+..+ ..+.+|+++..++|++= .+|-..|....
T Consensus 99 ~~~~~~~i~~-S~DgG~-TW~~~--~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~~~~l~~S-~DgG~TW~~~~-- 171 (763)
T 3a0f_A 99 QWDPWAAFLV-SDDRGK-TFKQY--RSPVPMGANDMGRNGGERLAVNPHWTDELWFGSRTQGLWRS-TDRAQTWSRMN-- 171 (763)
T ss_dssp TTCSCCEEEE-ESSTTS-SCEEE--ECSSCCCTTSTTTTSBCCEEECTTSTTCEEEECSSSCEEEE-SSTTSSCEECT--
T ss_pred cCCCCceEEE-ECCCCC-Cceec--cCCcccCccccCccccceEEECCCCCCEEEEEeCCCcEEEE-CCCCcCccccc--
Confidence 45555 444443 22211 111100000011111 112222 35789999876777744 45333476411
Q ss_pred cccccccccccCCCCCccccceEEEcC-CCeEEEEcCCC-eEEEEeCCCCeEEEEEcCCCC-------------------
Q 006913 169 DQLGYRQGCTKTDVDCYFTSVPVIDQC-EGSIYISNTQG-ELYSLSAHSPYFNWIQDLSSF------------------- 227 (626)
Q Consensus 169 ~~~~~~~~~~~~l~~~~i~sspviD~~-dG~LwIGT~~G-gL~~ld~~tg~~~w~~~~~s~------------------- 227 (626)
.++ .......-...+++++. .+.||++...+ +|++ ..++|+ .|.......
T Consensus 172 -~~~------~~~~~~~~~~~i~~~p~~~~~~~~~~~~~g~v~~-S~DgG~-tW~~~~~~~~~~~~~~~~~~~p~~~~~~ 242 (763)
T 3a0f_A 172 -QLP------DSSTYGIGIISVIFDPKNVGTAYVASHAVGGLWV-TWDGGA-NWSQVGGQPTQWSDWTKSIVAASGTAIQ 242 (763)
T ss_dssp -TSC------CCSCTTTCEEEEEECSSSTTCEEEEESSTTCEEE-ESSSSS-SCEECTTCCCSCCHHHHHHHHHHCCCCS
T ss_pred -cCc------ccCCCccceEEEEECCCCCCEEEEEEeCCCeEEE-ECCCCC-CccccCCCcccccccccccccccccccc
Confidence 110 00000001123445431 45799998876 3664 455554 376432110
Q ss_pred ---CcceeeeeecCCeEEEEEcC--------CCEEEEEECCCCcEEEEEecCCCC--Cce--------------eeEEEe
Q 006913 228 ---DKAFTLTPGNNGYLYVTIPV--------RALVLALDTSSGNILWHKSVGPLG--SAE--------------YAPVVD 280 (626)
Q Consensus 228 ---~~v~sI~~D~dG~LwVGT~~--------gG~l~alD~~tG~~~w~~~~~~l~--~~~--------------sspvvD 280 (626)
.....++.+.+|.||+...+ .+.++..+ ++-..|+....... ..+ ..+.++
T Consensus 243 ~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~g~v~rS~--D~G~tW~~~~~~~~~~~~~~~~~~~~~~~~gg~~~i~v~ 320 (763)
T 3a0f_A 243 SSGPLPIKIALGKNGRLYITYSDAPGPWGVLYGEVWSYD--PTNGNWKHITPSREGANTYPAPTGNKKVVPGGWNGISVG 320 (763)
T ss_dssp SSSCEEEEEEECTTSCEEEEEESSCSSSCCCCEEEEEEE--TTTTEEEECCTTSSSSCEESCCCCCTTSCCCEEEEEEEC
T ss_pred CCCCcceeEEECCCCcEEEEeccCCCCCCCcceeEEEEe--CCCCceEECCCCCCCCccccccccccccccCCceeEEEc
Confidence 01123344558899998521 24666655 34446654222101 111 345555
Q ss_pred eCCeEEEEEcC----CeEEEEcCCCC
Q 006913 281 SNGWISVGSLD----GLLYSFSPSGV 302 (626)
Q Consensus 281 ~dG~IWVGT~~----gGLy~~d~~g~ 302 (626)
..+.||+++.+ +.|++-...|+
T Consensus 321 ~~~~v~~~~~~~~~~~~l~~S~DgG~ 346 (763)
T 3a0f_A 321 NGDTVVVSTLDANGEDSVYLSRDAGN 346 (763)
T ss_dssp STBCEEEEEESCTTSCCEEEESBTTS
T ss_pred CCCeEEEEecCCCCCCCEEEECCCCC
Confidence 35789999863 56666543344
No 281
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=71.28 E-value=1.2e+02 Score=32.77 Aligned_cols=256 Identities=11% Similarity=0.065 Sum_probs=118.4
Q ss_pred CccccccCCceeeeeEEe----eCCEEEEEe-----C----CcEEEEcCC------CCEEEEEeCCCCC-Ccc-------
Q 006913 28 AKVPYRRSAFRLSKPLIG----EDGKIYACS-----E----KTLFAFESN------GTIAWSLDLDFTC-NIG------- 80 (626)
Q Consensus 28 ~~~~~~~~~~~~Sspvid----~dG~IwIgS-----d----ggL~a~d~~------G~~~W~~~~~~~~-~i~------- 80 (626)
|-|||++.-..|.+|... .+.-+|+.+ + +.|..+|.+ |+++....++... ...
T Consensus 2 ~~~~~~~~~~~y~sp~~a~~~~~e~~~y~~~~~~~~~~~~~d~la~vDvdp~s~ty~~vi~~~~~p~~gde~HH~gwn~c 81 (462)
T 2ece_A 2 AIVPFKRDPTFYPSPKMAMKAPPEDLAYVACLYTGTGINRADFIAVVDVNPKSETYSKIVHKVELPYINDELHHFGWNAC 81 (462)
T ss_dssp ------CCTTCCSSHHHHHTSCCCSEEEEEEECTTTTCCCCCEEEEEECCTTSTTTTSEEEEEECSSSCCCBCCCEESCC
T ss_pred ccccCCCCCCccCChHHHhcCCcceEEEEEeeccCCCCCCCCeEEEEECCCCCCCcceEEEEEECCCCCCcccccchhhh
Confidence 346777777777777543 233455432 1 268888873 7887666665321 000
Q ss_pred ---cCeEE---ecCCeEEEEE--CCeEEEEECCCCccccceeEEEecCCCC--CCCCCCeeEEEEEEcCCeEEEEEcC--
Q 006913 81 ---TAPVH---GGTGEVYIVA--ENRVLKVDLLKIGTSESATQVFYGTGSG--KGGTGAIAGIAVSTSSSSVYINVKG-- 148 (626)
Q Consensus 81 ---~sp~i---D~dG~IwVgT--~ggL~~id~~~~~~~~~~~~~~~~~~~~--~~~~~~~I~s~~~d~dG~LwIgT~~-- 148 (626)
..+.. .....+|+.. ++.|+.+|..+.... +...-...+... +.. ...-..+.+..+| |||...+
T Consensus 82 ss~~~~~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~-p~~~k~ie~~~~~~~~g-~s~Ph~~~~~pdG-i~Vs~~g~~ 158 (462)
T 2ece_A 82 SSALCPNGKPNIERRFLIVPGLRSSRIYIIDTKPNPRE-PKIIKVIEPEEVKKVSG-YSRLHTVHCGPDA-IYISALGNE 158 (462)
T ss_dssp GGGGSTTCCTTCCSCEEEEEBTTTCCEEEEECCSCTTS-CEEEEEECHHHHHHHHC-EEEEEEEEECSSC-EEEEEEEET
T ss_pred hhhcccccCCCccCCEEEEccCCCCeEEEEECCCCCCC-ceeeeeechhhcccccC-CCcccceeECCCe-EEEEcCCCc
Confidence 01110 1234588876 689999997643100 001000100000 000 0000112334566 8886543
Q ss_pred -----CeEEEEeCC-CcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEc-------------------
Q 006913 149 -----RALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISN------------------- 203 (626)
Q Consensus 149 -----gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT------------------- 203 (626)
++|..+|.. ++++-.... + . .. ..+....-.....+.++...
T Consensus 159 ~g~~~g~v~vlD~~T~~v~~~~~~-----~-~--~~-----~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~ 225 (462)
T 2ece_A 159 EGEGPGGILMLDHYSFEPLGKWEI-----D-R--GD-----QYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDR 225 (462)
T ss_dssp TSCSCCEEEEECTTTCCEEEECCS-----B-C--TT-----CCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHH
T ss_pred CCCCCCeEEEEECCCCeEEEEEcc-----C-C--CC-----ccccceEEECCCCCEEEEccCcCccccccccchhhhhhc
Confidence 579999975 776543211 0 0 00 00111122333133444443
Q ss_pred CCCeEEEEeCCCCeEEEEEcCCCCC-cceee--eeecCC-eEEEEEc-----CCCEEEEEECCCCcEEEEEe--cCC---
Q 006913 204 TQGELYSLSAHSPYFNWIQDLSSFD-KAFTL--TPGNNG-YLYVTIP-----VRALVLALDTSSGNILWHKS--VGP--- 269 (626)
Q Consensus 204 ~~GgL~~ld~~tg~~~w~~~~~s~~-~v~sI--~~D~dG-~LwVGT~-----~gG~l~alD~~tG~~~w~~~--~~~--- 269 (626)
+.+.|..+|.++++..-..+.+... ....+ +.+.+| .+||+.. ..+.+..+....|....... +..
T Consensus 226 ~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v 305 (462)
T 2ece_A 226 YGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPL 305 (462)
T ss_dssp SCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEEC
T ss_pred cCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccc
Confidence 2578999999987765544443111 11122 235555 6888775 44455443333354321111 110
Q ss_pred ---C----------CCceeeEEEeeCC-eEEEEEcC-CeEEEEcC
Q 006913 270 ---L----------GSAEYAPVVDSNG-WISVGSLD-GLLYSFSP 299 (626)
Q Consensus 270 ---l----------~~~~sspvvD~dG-~IWVGT~~-gGLy~~d~ 299 (626)
+ ......+.+..|| .||++... +.|..|+.
T Consensus 306 ~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV 350 (462)
T 2ece_A 306 EGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDI 350 (462)
T ss_dssp CSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEEC
T ss_pred cccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEe
Confidence 0 1123445666665 69998864 57777774
No 282
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=70.48 E-value=1.3e+02 Score=32.98 Aligned_cols=92 Identities=13% Similarity=0.035 Sum_probs=45.7
Q ss_pred eEEEEeCCCCeEEEEEcCCC-----CCcceeeeeecCCeEEEEE-cC---CCEEEEEECCCCcEEEEEec--CC-CCCce
Q 006913 207 ELYSLSAHSPYFNWIQDLSS-----FDKAFTLTPGNNGYLYVTI-PV---RALVLALDTSSGNILWHKSV--GP-LGSAE 274 (626)
Q Consensus 207 gL~~ld~~tg~~~w~~~~~s-----~~~v~sI~~D~dG~LwVGT-~~---gG~l~alD~~tG~~~w~~~~--~~-l~~~~ 274 (626)
.|+.+|..+++......... ...+..+....||++.+.. .. ...++.+|..+|+....... .. .....
T Consensus 229 ~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~ 308 (723)
T 1xfd_A 229 SLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQN 308 (723)
T ss_dssp EEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCC
T ss_pred EEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccC
Confidence 57777777765311111110 1123445556688765433 21 13677789888876543221 11 00001
Q ss_pred eeEEEeeCCe-EEEE-E-cCC------eEEEEc
Q 006913 275 YAPVVDSNGW-ISVG-S-LDG------LLYSFS 298 (626)
Q Consensus 275 sspvvD~dG~-IWVG-T-~~g------GLy~~d 298 (626)
..+...+||. |++. + .++ .|+.++
T Consensus 309 ~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d 341 (723)
T 1xfd_A 309 EEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSS 341 (723)
T ss_dssp CCCEECTTSCSEEEEEEECCSSSSCEEEEEEEC
T ss_pred CCceEcCCCCeEEEEEecccCCCcceeEEEEEe
Confidence 2456666775 4443 4 333 488888
No 283
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=70.28 E-value=89 Score=30.98 Aligned_cols=112 Identities=9% Similarity=0.050 Sum_probs=61.1
Q ss_pred ceEEEcCCCeEEEEcCCCeEEEEeCCCCeEEEEEcCCC-CCcceeeeeecCCeEEEEEcCCCEEEEEECCCCcEEE-EEe
Q 006913 189 VPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSS-FDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILW-HKS 266 (626)
Q Consensus 189 spviD~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s-~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~tG~~~w-~~~ 266 (626)
++...+.+..|..|..++.+..++.+++.......... ...+.++....+|++.+....++.+...|..++.... ...
T Consensus 66 ~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~ 145 (345)
T 3fm0_A 66 KVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSV 145 (345)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEE
T ss_pred EEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEE
Confidence 34444424457777778888888877765433322222 2346667666677544443345666666765553211 111
Q ss_pred cCCCCCceeeEEEeeCC-eEEEEEcCCeEEEEcCC
Q 006913 267 VGPLGSAEYAPVVDSNG-WISVGSLDGLLYSFSPS 300 (626)
Q Consensus 267 ~~~l~~~~sspvvD~dG-~IWVGT~~gGLy~~d~~ 300 (626)
.......+..+...+++ .|..|+.++.+..++..
T Consensus 146 ~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~ 180 (345)
T 3fm0_A 146 LNSHTQDVKHVVWHPSQELLASASYDDTVKLYREE 180 (345)
T ss_dssp ECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEE
T ss_pred ecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEec
Confidence 11111224445565555 57778888888888754
No 284
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=70.16 E-value=90 Score=30.97 Aligned_cols=65 Identities=11% Similarity=0.172 Sum_probs=38.1
Q ss_pred eEEeeCCE-EEEEeC-Cc---EEEEcC-CCCEEEEEeCCCCCCcccCeEEecCCe-EEEEE-CCeEEEEECCCCc
Q 006913 42 PLIGEDGK-IYACSE-KT---LFAFES-NGTIAWSLDLDFTCNIGTAPVHGGTGE-VYIVA-ENRVLKVDLLKIG 108 (626)
Q Consensus 42 pvid~dG~-IwIgSd-gg---L~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~dG~-IwVgT-~ggL~~id~~~~~ 108 (626)
|....||+ |..+++ ++ |+.+|. +|.... . ..........+....+|+ |+.+. +..|+.+|..++.
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~-l-t~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~ 113 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQ-L-TEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLE 113 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEE-C-CCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCC
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEE-e-eeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 55656775 544543 44 999998 555432 2 111111222456667775 55555 5689999988763
No 285
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=69.80 E-value=1.1e+02 Score=32.64 Aligned_cols=94 Identities=16% Similarity=0.178 Sum_probs=49.7
Q ss_pred eEEEEcCCCeEEEEeCCCCeEE-EEEcCCC----------CCcceeeeeec----CCeEEEEEcC--C----------CE
Q 006913 198 SIYISNTQGELYSLSAHSPYFN-WIQDLSS----------FDKAFTLTPGN----NGYLYVTIPV--R----------AL 250 (626)
Q Consensus 198 ~LwIGT~~GgL~~ld~~tg~~~-w~~~~~s----------~~~v~sI~~D~----dG~LwVGT~~--g----------G~ 250 (626)
+|||+...|.|+.++.++.... -..+... ......|+.+. ++.|||.... + ..
T Consensus 28 rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~~~~~~~~~~~~~~ 107 (463)
T 2wg3_C 28 RLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQERWAIGPHDHILR 107 (463)
T ss_dssp CEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECCCSSCSSSSCEEEE
T ss_pred EEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCCCCcccCCcccceE
Confidence 5999988888999876543110 0011110 11234456553 5889987421 1 14
Q ss_pred EEEEECCC----------CcEEEEEecCCCCCceeeEEEeeCCeEEEEEcC
Q 006913 251 VLALDTSS----------GNILWHKSVGPLGSAEYAPVVDSNGWISVGSLD 291 (626)
Q Consensus 251 l~alD~~t----------G~~~w~~~~~~l~~~~sspvvD~dG~IWVGT~~ 291 (626)
|..+.... .++++..........-..+++++||.|||++-+
T Consensus 108 v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 108 VVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp EEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred EEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
Confidence 54444321 123333221111223456888999999998754
No 286
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=69.41 E-value=1.5e+02 Score=33.41 Aligned_cols=253 Identities=18% Similarity=0.200 Sum_probs=120.3
Q ss_pred eeeeeEEeeC--CEEEEEe-CCcEEEEcCCCCEEEEEeCCCCC------CcccCeEEec--CCeEEEEEC----------
Q 006913 38 RLSKPLIGED--GKIYACS-EKTLFAFESNGTIAWSLDLDFTC------NIGTAPVHGG--TGEVYIVAE---------- 96 (626)
Q Consensus 38 ~~Sspvid~d--G~IwIgS-dggL~a~d~~G~~~W~~~~~~~~------~i~~sp~iD~--dG~IwVgT~---------- 96 (626)
.....+++.. +.||+++ .++|++.+..|+ .|........ .-+.++++|. .+.||+++.
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~G~-tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~ 102 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWDPSTE-TWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNM 102 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEETTTT-EEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCC
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeCCCCC-CEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCC
Confidence 4455666543 7899998 678999886555 5765332110 1134566664 468999872
Q ss_pred CeEEEEECCCCccccceeEEEecCCCCCCCCC-CeeEEEEEE--cCCeEEEEEcC-CeEEEEeCCCcEEEEECCcccccc
Q 006913 97 NRVLKVDLLKIGTSESATQVFYGTGSGKGGTG-AIAGIAVST--SSSSVYINVKG-RALFAFMTHGQLLWSAGPVLDQLG 172 (626)
Q Consensus 97 ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~-~~I~s~~~d--~dG~LwIgT~~-gGL~a~d~~G~~~w~~~~~~~~~~ 172 (626)
.+|++= .+.++ .|... ...........+ ..+..+..+ ..+.||+++.. .||++- .+|-..|.....+...+
T Consensus 103 ~~l~~S-~DgG~-TW~~~--~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~g~gl~~S-~DgG~tW~~~~~~~~~~ 177 (737)
T 2cn3_A 103 GAILRS-TDRGE-TWEKT--ILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRCGNGLWRS-TDYGVTWSKVESFPNPG 177 (737)
T ss_dssp CEEEEE-SSSSS-SCEEE--ECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECSTTCCEEEE-SSTTSSCEECTTCCCCC
T ss_pred ccEEEe-CCCCC-CcccC--CCCcccCCCcCcccccceEEECCCCCCEEEEeeccCCcEEEe-CCCCcceecccCCCCCc
Confidence 356554 44443 22211 111100000001 111223333 34689999854 678743 44333476411000000
Q ss_pred -cccccccC-C-C-CCccccceEEEcC-------CCeEEEEcCCC--eEEEEeCCCCeEEEEEcCCC-CC-cceeeeeec
Q 006913 173 -YRQGCTKT-D-V-DCYFTSVPVIDQC-------EGSIYISNTQG--ELYSLSAHSPYFNWIQDLSS-FD-KAFTLTPGN 237 (626)
Q Consensus 173 -~~~~~~~~-l-~-~~~i~sspviD~~-------dG~LwIGT~~G--gL~~ld~~tg~~~w~~~~~s-~~-~v~sI~~D~ 237 (626)
+.. .+.. . . ...+ ..+.+|+. .+.||+++.++ +|++ ..++|+ .|...... .. ....+..+.
T Consensus 178 ~~~~-~p~~~~~~~~~g~-~~v~~dp~~~~~~~~~~~v~~~~~~~~~~v~~-S~DgG~-tW~~~~~~p~~~~~~~~~~~~ 253 (737)
T 2cn3_A 178 TYIY-DPNFDYTKDIIGV-VWVVFDKSSSTPGNPTKTIYVGVADKNESIYR-STDGGV-TWKAVPGQPKGLLPHHGVLAS 253 (737)
T ss_dssp CCBS-CTTSTTTCSBCCE-EEEEECGGGSCTTSCCSCEEEEESCSSCCEEE-ESSTTS-CCEECTTCCCSSEEEEEEECT
T ss_pred cccc-CcccccccCCCCE-EEEEcCCCCcccCCCCCEEEEEecCCCccEEE-EcCCCC-ceEECCCCCCcccceEEEECC
Confidence 000 0000 0 0 0001 22445431 13899987653 4654 455554 47654321 11 112334455
Q ss_pred CCeEEEEEc---------CCCEEEEEECCCCcEEEEEecC-CCC----Cc-eeeEEEeeC--CeEEEEEcC-----CeEE
Q 006913 238 NGYLYVTIP---------VRALVLALDTSSGNILWHKSVG-PLG----SA-EYAPVVDSN--GWISVGSLD-----GLLY 295 (626)
Q Consensus 238 dG~LwVGT~---------~gG~l~alD~~tG~~~w~~~~~-~l~----~~-~sspvvD~d--G~IWVGT~~-----gGLy 295 (626)
++.||+... ..+.++..+- +...|+.... +.. .+ +..+++++. +.||+++.. +.||
T Consensus 254 ~~~l~~~~~d~~g~y~~~~~g~v~~s~d--~G~tW~~i~~~~~~~~~~~~~~~~i~v~p~~~~~ly~~~~~~~~~~~~l~ 331 (737)
T 2cn3_A 254 NGMLYITYGDTCGPYDGNGKGQVWKFNT--RTGEWIDITPIPYSSSDNRFCFAGLAVDRQNPDIIMVTSMNAWWPDEYIF 331 (737)
T ss_dssp TSEEEEEEESSCCSSCCSCCEEEEEEET--TTCCEEECCSSCTTSTTCCSEEEEEEECTTCTTCEEEEEECCCSSCCCEE
T ss_pred CCeEEEEecCCCCccccccCceEEEEeC--CCCCEEEccCCCCCCcccccccccEEEcCCCCCEEEEEecccCCCCccEE
Confidence 889998642 2346777662 3335653221 110 11 234566543 689999865 5577
Q ss_pred EEcCCCC
Q 006913 296 SFSPSGV 302 (626)
Q Consensus 296 ~~d~~g~ 302 (626)
+-...|+
T Consensus 332 ~S~DgG~ 338 (737)
T 2cn3_A 332 RSTDGGA 338 (737)
T ss_dssp EESSTTS
T ss_pred EeCCCCc
Confidence 7654454
No 287
>3ogk_Q JAZ1 incomplete degron peptide; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana}
Probab=68.70 E-value=1.9 Score=26.48 Aligned_cols=13 Identities=46% Similarity=0.698 Sum_probs=10.4
Q ss_pred ccchHHHHHHhhh
Q 006913 428 GQHLGNFLEKRRS 440 (626)
Q Consensus 428 ~~~~~~~~~~~~~ 440 (626)
+.-|+.|||||..
T Consensus 2 k~SLqRFleKRk~ 14 (22)
T 3ogk_Q 2 RASLHRFLEKRKD 14 (26)
T ss_pred chhHHHHHHHHHH
Confidence 4568999999974
No 288
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=66.99 E-value=1.1e+02 Score=30.68 Aligned_cols=211 Identities=15% Similarity=0.131 Sum_probs=108.9
Q ss_pred EEeeCCEEEEEe---CCcEEEEcCCCCEEEEEeCCCCCCcccCeEEecCCeEEEEE-C--------------CeEEEEEC
Q 006913 43 LIGEDGKIYACS---EKTLFAFESNGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVA-E--------------NRVLKVDL 104 (626)
Q Consensus 43 vid~dG~IwIgS---dggL~a~d~~G~~~W~~~~~~~~~i~~sp~iD~dG~IwVgT-~--------------ggL~~id~ 104 (626)
++..++.||... .+.||+.+.+|.-...+... ...-+.+ ..+.||... . ..|++++.
T Consensus 21 ~~~~g~~iy~~n~~d~~~ly~~~~dg~~~~~l~~~----~~~~i~~-~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~ 95 (302)
T 3s25_A 21 FCESDGEVFFSNTNDNGRLYAMNIDGSNIHKLSND----TAMYINA-DKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKR 95 (302)
T ss_dssp EEEETTEEEEEEGGGTTEEEEEETTSCSCEEEEEE----EEEEEEE-CSSEEEEEEECC------CCSSCCSEEEEEEET
T ss_pred EEEeCCEEEEEeCCCCceEEEEcCCCCCCEEccCC----ceeeEEE-cCCEEEEEECCCCcccccceeccCCCeEEEEeC
Confidence 344678888875 46899999876432222111 1112223 234566554 2 35788887
Q ss_pred CCCccccceeEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEE----cCCeEEEEeCCCcEEEEECCcccccccccccccC
Q 006913 105 LKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINV----KGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKT 180 (626)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT----~~gGL~a~d~~G~~~w~~~~~~~~~~~~~~~~~~ 180 (626)
++... ... .. . .+..+...++.||... ....|+.++.+|....... . ..
T Consensus 96 dg~~~----~~l--~~-------~--~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt--------~----~~ 148 (302)
T 3s25_A 96 NGHGS----TVL--DP-------D--PCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIK--------N----HY 148 (302)
T ss_dssp TSCCC----EEE--EC-------S--CEEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEE--------S----SC
T ss_pred CCCcc----eEe--ec-------C--CccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEe--------C----CC
Confidence 76521 111 11 0 1122334677888875 2456888888764333220 0 00
Q ss_pred CCCCccccceEEEcCCCeEEEEcC-CCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCCeEEEEEcC-CCEEEEEECCC
Q 006913 181 DVDCYFTSVPVIDQCEGSIYISNT-QGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPV-RALVLALDTSS 258 (626)
Q Consensus 181 l~~~~i~sspviD~~dG~LwIGT~-~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG~LwVGT~~-gG~l~alD~~t 258 (626)
. .+...+ ++.||.... ...|++++.+++...-... +. ....+.++ .+.||..... +..++..+...
T Consensus 149 -----~-~~~~~~--g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~-~~--~~~~~~P~-g~~iy~t~~~~~~~I~~~~ldG 216 (302)
T 3s25_A 149 -----L-FTCNTS--DRYFYYNNPKNGQLYRYDTASQSEALFYD-CN--CYKPVVLD-DTNVYYMDVNRDNAIVHVNINN 216 (302)
T ss_dssp -----C-CCSEEE--TTEEEEECTTTCCEEEEETTTTEEEEEEC-SC--EEEEEEEE-TTEEEEEEGGGTTEEEEECSSS
T ss_pred -----c-eEeeEE--CCEEEEEeCCCceEEEEECCCCCEEEEeC-CC--ccceeeec-CCEEEEEEcCCCcEEEEEECCC
Confidence 0 112234 667776654 5689999998876443222 11 11112223 5677765532 24787777544
Q ss_pred CcEEEEEecCCCCCceeeEEEeeCCeEEEEEc--CCeEEEEcCCCCE
Q 006913 259 GNILWHKSVGPLGSAEYAPVVDSNGWISVGSL--DGLLYSFSPSGVL 303 (626)
Q Consensus 259 G~~~w~~~~~~l~~~~sspvvD~dG~IWVGT~--~gGLy~~d~~g~~ 303 (626)
+... ..... ....+..+ .++||..+. .+.|+..+.+|..
T Consensus 217 ~~~~-~Lt~~----~~~~~~~~-g~~Iy~~~~~~~~~i~~~~~DG~~ 257 (302)
T 3s25_A 217 PNPV-VLTEA----NIEHYNVY-GSLIFYQRGGDNPALCVVKNDGTG 257 (302)
T ss_dssp CCCE-ECSCS----CEEEEEEE-TTEEEEEECSSSCEEEEEETTSCC
T ss_pred CCeE-EEeCC----CcceEEEC-CCEEEEEECCCCcEEEEEECCCCc
Confidence 4322 21111 11223333 567887653 3678999888754
No 289
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=64.82 E-value=1.2e+02 Score=30.28 Aligned_cols=61 Identities=13% Similarity=0.272 Sum_probs=35.6
Q ss_pred eCCEEEEEe---CCcEEEEcCC-CCEEEEEeCCCC-CCc-ccCeEEecCCeEEEEE---C---------CeEEEEECCCC
Q 006913 46 EDGKIYACS---EKTLFAFESN-GTIAWSLDLDFT-CNI-GTAPVHGGTGEVYIVA---E---------NRVLKVDLLKI 107 (626)
Q Consensus 46 ~dG~IwIgS---dggL~a~d~~-G~~~W~~~~~~~-~~i-~~sp~iD~dG~IwVgT---~---------ggL~~id~~~~ 107 (626)
.++.||+.. .+.+++||.. ....|....... ... ..+.+. -++.|||.. + +.+++||+.+.
T Consensus 18 ~~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 18 DNDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAF-IDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp ETTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEE-ETTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred ECCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEE-ECCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 488999853 3469999983 344676533211 111 222232 357888842 1 35888998875
No 290
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=63.18 E-value=1.2e+02 Score=29.77 Aligned_cols=209 Identities=11% Similarity=0.091 Sum_probs=0.0
Q ss_pred CCeEEEEECCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEc----CCe--------EEEEe
Q 006913 88 TGEVYIVAENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVK----GRA--------LFAFM 155 (626)
Q Consensus 88 dG~IwVgT~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~----~gG--------L~a~d 155 (626)
++.|++.....+.++|+.++ .|.....+.+.... ...+...++.||+-.- ..+ ++.||
T Consensus 15 ~~~i~~~GG~~~~~yd~~~~-------~W~~~~~~~~~~r~---~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d 84 (318)
T 2woz_A 15 KDLILLVNDTAAVAYDPMEN-------ECYLTALAEQIPRN---HSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLD 84 (318)
T ss_dssp EEEEEEECSSEEEEEETTTT-------EEEEEEECTTSCSS---EEEEECSSSCEEEEESSCC-------CCCBEEEEEE
T ss_pred cchhhhccccceEEECCCCC-------ceecccCCccCCcc---ceEEEEECCEEEEECCcccCccccCCCccccEEEEe
Q ss_pred CCCcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcCC--------CeEEEEeCCCCeEEEEEcCCCC
Q 006913 156 THGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQ--------GELYSLSAHSPYFNWIQDLSSF 227 (626)
Q Consensus 156 ~~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~~--------GgL~~ld~~tg~~~w~~~~~s~ 227 (626)
+.... |.. .......-...+.+.. ++.||+-... ..+++||+.+++-....+.+..
T Consensus 85 ~~~~~-W~~-------------~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~ 148 (318)
T 2woz_A 85 NVSSE-WVG-------------LPPLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIK 148 (318)
T ss_dssp TTTTE-EEE-------------CSCBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSC
T ss_pred CCCCc-EEE-------------CCCCCccccccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCc
Q ss_pred CcceeeeeecCCeEEEEEcCCCE---------EEEEECCCCcEEEEEecCCCCCceeeEEEeeCCeEEEEE------cCC
Q 006913 228 DKAFTLTPGNNGYLYVTIPVRAL---------VLALDTSSGNILWHKSVGPLGSAEYAPVVDSNGWISVGS------LDG 292 (626)
Q Consensus 228 ~~v~sI~~D~dG~LwVGT~~gG~---------l~alD~~tG~~~w~~~~~~l~~~~sspvvD~dG~IWVGT------~~g 292 (626)
....+.+. .++.||| -||. ++.+|+.++ .|.............-+..-++.||+-. ...
T Consensus 149 r~~~~~~~-~~~~iyv---~GG~~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~ 222 (318)
T 2woz_A 149 VYGHNVIS-HNGMIYC---LGGKTDDKKCTNRVFIYNPKKG--DWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSA 222 (318)
T ss_dssp EESCEEEE-ETTEEEE---ECCEESSSCBCCCEEEEETTTT--EEEEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEE
T ss_pred ccccEEEE-ECCEEEE---EcCCCCCCCccceEEEEcCCCC--EEEECCCCCCCcccceEEEECCEEEEEcCcCCCCccc
Q ss_pred eEEEEcCCCCEEEEeeccCCCCccccCceEEEEEEecCCcEEE
Q 006913 293 LLYSFSPSGVLNKFSKSDTSDSVIQSSPYWFHLLGPSIGLKAI 335 (626)
Q Consensus 293 GLy~~d~~g~~~~~~~~~~~~~~ilssp~V~~Il~DsdG~IwI 335 (626)
.+++||+......... .++.+...+-+.-.+|.||+
T Consensus 223 ~~~~yd~~~~~W~~~~-------~~p~~r~~~~~~~~~~~i~v 258 (318)
T 2woz_A 223 SVEAFDLKTNKWEVMT-------EFPQERSSISLVSLAGSLYA 258 (318)
T ss_dssp EEEEEETTTCCEEECC-------CCSSCCBSCEEEEETTEEEE
T ss_pred eEEEEECCCCeEEECC-------CCCCcccceEEEEECCEEEE
No 291
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=63.05 E-value=1.2e+02 Score=29.94 Aligned_cols=109 Identities=9% Similarity=0.081 Sum_probs=61.9
Q ss_pred eEEEcCCCeEEEEcCCCeEEEEeCCCCeEEEEEcCCCCCcc--eeeeeecCCeEEEEEc---------------------
Q 006913 190 PVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKA--FTLTPGNNGYLYVTIP--------------------- 246 (626)
Q Consensus 190 pviD~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s~~~v--~sI~~D~dG~LwVGT~--------------------- 246 (626)
+...+.+..|+++..++.|+.+|..+++......... ... .......+|++.++..
T Consensus 86 ~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~-~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (388)
T 3pe7_A 86 GFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPA-EWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFT 164 (388)
T ss_dssp CEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCT-TEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGG
T ss_pred eEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechh-hcccccceeECCCCCeeccccccCcccccccccchhhhhhcc
Confidence 4444324457777667789999999987654433222 111 1122356776665421
Q ss_pred -CCCEEEEEECCCCcEEEEEecCCCCCceeeEEEee-CCe-EEEEEc------CCeEEEEcCCCC
Q 006913 247 -VRALVLALDTSSGNILWHKSVGPLGSAEYAPVVDS-NGW-ISVGSL------DGLLYSFSPSGV 302 (626)
Q Consensus 247 -~gG~l~alD~~tG~~~w~~~~~~l~~~~sspvvD~-dG~-IWVGT~------~gGLy~~d~~g~ 302 (626)
....++.+|..+|+........ .....+...+ +|. |.+... ...|+.++.++.
T Consensus 165 ~~~~~l~~~d~~~g~~~~l~~~~---~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~ 226 (388)
T 3pe7_A 165 KPCCRLMRVDLKTGESTVILQEN---QWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGT 226 (388)
T ss_dssp CCCEEEEEEETTTCCEEEEEEES---SCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSC
T ss_pred CCcceEEEEECCCCceEEeecCC---ccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCC
Confidence 1257888998888765443322 1244566666 664 434433 237888887543
No 292
>3ogl_Q JAZ1 incomplete degron peptide; leucine-rich repeats, ubiquitin ligase, SCF, protein binding; HET: 7JA; 3.18A {Arabidopsis thaliana} PDB: 3ogm_Q*
Probab=61.34 E-value=2.4 Score=25.60 Aligned_cols=12 Identities=50% Similarity=0.742 Sum_probs=9.6
Q ss_pred ccchHHHHHHhh
Q 006913 428 GQHLGNFLEKRR 439 (626)
Q Consensus 428 ~~~~~~~~~~~~ 439 (626)
+.-|+.|||||.
T Consensus 7 k~SLqRFleKRk 18 (21)
T 3ogl_Q 7 RASLHRFLEKRK 18 (26)
T ss_pred HHHHHHHHHHhh
Confidence 356889999996
No 293
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=60.93 E-value=1.9e+02 Score=31.37 Aligned_cols=96 Identities=11% Similarity=-0.007 Sum_probs=51.6
Q ss_pred CeEEEEeCCC------CeEEEEEcCCCCCcceeeeeecCCe-EEEEEcCC-------CEEEEEECC-CC---cEEEEEec
Q 006913 206 GELYSLSAHS------PYFNWIQDLSSFDKAFTLTPGNNGY-LYVTIPVR-------ALVLALDTS-SG---NILWHKSV 267 (626)
Q Consensus 206 GgL~~ld~~t------g~~~w~~~~~s~~~v~sI~~D~dG~-LwVGT~~g-------G~l~alD~~-tG---~~~w~~~~ 267 (626)
..|+.+|.++ +....... .....+..+....||+ |.++.... ..++.+|.. +| ........
T Consensus 161 ~~i~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~ 239 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSAVRELSD-DAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGG 239 (662)
T ss_dssp EEEEEEETTSTTTTCGGGSEESSC-SCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEE
T ss_pred eEEEEEECCCCccccCCceeEEEe-cCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCC
Confidence 3688888887 55432210 1112233345556774 54444222 367888877 56 33222211
Q ss_pred CCCCCceeeEEEeeCCeEEEEEcC-C--eEEEEcCC-CCEE
Q 006913 268 GPLGSAEYAPVVDSNGWISVGSLD-G--LLYSFSPS-GVLN 304 (626)
Q Consensus 268 ~~l~~~~sspvvD~dG~IWVGT~~-g--GLy~~d~~-g~~~ 304 (626)
. ......+...+||.+++.+.. + .||.++.. ++..
T Consensus 240 ~--~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~ 278 (662)
T 3azo_A 240 P--EEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAAT 278 (662)
T ss_dssp T--TBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEE
T ss_pred C--CceEcceEECCCCeEEEEECCCCCeEEEEEECCCCcee
Confidence 1 123455777778887776643 3 69999874 5543
No 294
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=60.69 E-value=1.3e+02 Score=29.41 Aligned_cols=204 Identities=11% Similarity=0.114 Sum_probs=98.2
Q ss_pred EEEEEeCCcEEEEcC-CCCEEEEEeC-CCCCCc-ccCeEEecCCeEEEEEC-------------CeEEEEECCCCccccc
Q 006913 49 KIYACSEKTLFAFES-NGTIAWSLDL-DFTCNI-GTAPVHGGTGEVYIVAE-------------NRVLKVDLLKIGTSES 112 (626)
Q Consensus 49 ~IwIgSdggL~a~d~-~G~~~W~~~~-~~~~~i-~~sp~iD~dG~IwVgT~-------------ggL~~id~~~~~~~~~ 112 (626)
.|++-..+.+++||+ +++ |.... +..... ..+.+ ..++.||+... +.++++|+.++
T Consensus 6 ~l~~~GG~~~~~yd~~~~~--W~~~~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~----- 77 (315)
T 4asc_A 6 LIFMISEEGAVAYDPAANE--CYCASLSSQVPKNHVSLV-TKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDS----- 77 (315)
T ss_dssp EEEEEETTEEEEEETTTTE--EEEEECCCCSCSSEEEEE-CTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTT-----
T ss_pred EEEEEcCCceEEECCCCCe--EecCCCCCCCCccceEEE-EECCEEEEEcCcccCCCCCccccccceEEecCCCC-----
Confidence 355433367999998 543 65422 111111 22223 34677877421 12788898875
Q ss_pred eeEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEc---------CCeEEEEeCCCcEEEEECCcccccccccccccCCCC
Q 006913 113 ATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVK---------GRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVD 183 (626)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~---------~gGL~a~d~~G~~~w~~~~~~~~~~~~~~~~~~l~~ 183 (626)
.|..-... ............++.||+..- .+.+++||+... .|.... .++ ....
T Consensus 78 --~W~~~~~~----p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~-~W~~~~---~~p------~~r~- 140 (315)
T 4asc_A 78 --EWLGMPPL----PSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSF-KWGESD---PLP------YVVY- 140 (315)
T ss_dssp --EEEECCCB----SSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTT-EEEECC---CCS------SCCB-
T ss_pred --eEEECCCC----CcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCC-cEeECC---CCC------Cccc-
Confidence 45322110 111111122334778887421 134888998633 476411 111 0100
Q ss_pred CccccceEEEcCCCeEEEEcC-------CCeEEEEeCCCCeEEEEEcCC--CCCcceeeeeecCCeEEEEEc-CC----C
Q 006913 184 CYFTSVPVIDQCEGSIYISNT-------QGELYSLSAHSPYFNWIQDLS--SFDKAFTLTPGNNGYLYVTIP-VR----A 249 (626)
Q Consensus 184 ~~i~sspviD~~dG~LwIGT~-------~GgL~~ld~~tg~~~w~~~~~--s~~~v~sI~~D~dG~LwVGT~-~g----G 249 (626)
..+.+.. ++.||+-.. ...+++||+.++ .|..-.. ......+.+. .++.|||..- .+ .
T Consensus 141 ---~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~ 212 (315)
T 4asc_A 141 ---GHTVLSH--MDLVYVIGGKGSDRKCLNKMCVYDPKKF--EWKELAPMQTARSLFGATV-HDGRIIVAAGVTDTGLTS 212 (315)
T ss_dssp ---SCEEEEE--TTEEEEECCBCTTSCBCCCEEEEETTTT--EEEECCCCSSCCBSCEEEE-ETTEEEEEEEECSSSEEE
T ss_pred ---ceeEEEE--CCEEEEEeCCCCCCcccceEEEEeCCCC--eEEECCCCCCchhceEEEE-ECCEEEEEeccCCCCccc
Confidence 1112333 678886432 135899999875 4764322 1111122222 3678887531 11 1
Q ss_pred EEEEEECCCCcEEEEEecC-CCCCceeeEEEeeCCeEEEE
Q 006913 250 LVLALDTSSGNILWHKSVG-PLGSAEYAPVVDSNGWISVG 288 (626)
Q Consensus 250 ~l~alD~~tG~~~w~~~~~-~l~~~~sspvvD~dG~IWVG 288 (626)
.+..+|+.++ .|..... +......+.+.. ++.||+-
T Consensus 213 ~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~~-~~~l~v~ 249 (315)
T 4asc_A 213 SAEVYSITDN--KWAPFEAFPQERSSLSLVSL-VGTLYAI 249 (315)
T ss_dssp EEEEEETTTT--EEEEECCCSSCCBSCEEEEE-TTEEEEE
T ss_pred eEEEEECCCC--eEEECCCCCCcccceeEEEE-CCEEEEE
Confidence 5778898776 5654322 111122223333 6777773
No 295
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=59.25 E-value=2.4e+02 Score=32.14 Aligned_cols=207 Identities=10% Similarity=0.046 Sum_probs=101.8
Q ss_pred cccCeEEec--CCeEEEEE-CCeEEEEECCCCccccceeEEEecCCCCC--CCCCCeeEEEEEEc--CCeEEEEEcC---
Q 006913 79 IGTAPVHGG--TGEVYIVA-ENRVLKVDLLKIGTSESATQVFYGTGSGK--GGTGAIAGIAVSTS--SSSVYINVKG--- 148 (626)
Q Consensus 79 i~~sp~iD~--dG~IwVgT-~ggL~~id~~~~~~~~~~~~~~~~~~~~~--~~~~~~I~s~~~d~--dG~LwIgT~~--- 148 (626)
.+.++.++. .+.+|+++ .++|++-+..+. .|..-..... ......+..+..+. .+.+|+++..
T Consensus 16 ~i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG~-------tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~ 88 (789)
T 1sqj_A 16 YITGIVAHPKTKDLLYARTDIGGAYRWDAGTS-------KWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVG 88 (789)
T ss_dssp CEEEEEECSSSTTCEEEEESSSCEEEEETTTT-------EEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTT
T ss_pred cEEEEEECCCCCCEEEEEecCCCEEEecCCCC-------CeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCC
Confidence 344555544 47899998 688888765543 4542111000 00112344555553 3679998743
Q ss_pred ---CeEEEEeCCCcEEEEECCcccccccccccccCCCCCccccceEEEcC-CCeEEEEcCCCeEEEEeCCCCeEEEEEcC
Q 006913 149 ---RALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQC-EGSIYISNTQGELYSLSAHSPYFNWIQDL 224 (626)
Q Consensus 149 ---gGL~a~d~~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~-dG~LwIGT~~GgL~~ld~~tg~~~w~~~~ 224 (626)
++|+ ...++-..|.... .+... .....+......++++.. .+.||+++..++|++ ..++|+ .|....
T Consensus 89 ~~~~~v~-~S~DgG~TW~~~~----~~~~~--~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl~~-S~DgG~-TW~~~~ 159 (789)
T 1sqj_A 89 DEWAAFY-VSEDRGQSFTIYE----SPFPM--GANDMGRNNGERLAVNPFNSNEVWMGTRTEGIWK-SSDRAK-TWTNVT 159 (789)
T ss_dssp SSCCEEE-EESSTTSEEEEEE----CSSCC--CTTSTTTTSCCCEEEETTEEEEEEEECSSSCEEE-ESSTTS-SCEEET
T ss_pred CcccEEE-EECCCCCcceecc----CCccc--CccCCCccceeEEEEcCCCCCEEEEEeccCCEEE-ECCCCc-ccCCCc
Confidence 4554 4445334586411 01000 000000000123555531 467999986677775 455553 476432
Q ss_pred C-----C-CCcceeeeee--cCCeEEEEEcCCCEEEEEECCCCcEEEEEecCCCCCc-----------------eeeEEE
Q 006913 225 S-----S-FDKAFTLTPG--NNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSA-----------------EYAPVV 279 (626)
Q Consensus 225 ~-----s-~~~v~sI~~D--~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~~-----------------~sspvv 279 (626)
. . ...+..+..+ ..+.||++....+.++.- .++-..|....+..... ...+++
T Consensus 160 ~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~v~~S--~DgG~TW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (789)
T 1sqj_A 160 SIPDAFTNGIGYTSVIFDPERNGTIYASATAPQGMYVT--HDGGVSWEPVAGQPSSWLNRTTGAFPDKKPASIAPQPMKV 237 (789)
T ss_dssp TSCCCCSTTTCEEEEEECTTSTTCEEEEESSTTCEEEE--SSTTSSCEECTTCCCSCCHHHHHTSTTCCCSSSSCEEEEE
T ss_pred cCccccCCCCCeEEEEECCCCCCEEEEEEcCCCeEEEE--cCCCcCcccCCCCcCccccccccccCcccccccccceeEE
Confidence 1 0 1123345544 245899988531344432 23334566432211111 034455
Q ss_pred ee-CCeEEEEE---------cCCeEEEEcCCCCE
Q 006913 280 DS-NGWISVGS---------LDGLLYSFSPSGVL 303 (626)
Q Consensus 280 D~-dG~IWVGT---------~~gGLy~~d~~g~~ 303 (626)
++ ++.||+.. ..++||+.+..|+.
T Consensus 238 ~p~~~~l~~~~~~~~~p~~g~~g~l~~S~DgG~t 271 (789)
T 1sqj_A 238 ALTPNFLYVTYADYPGPWGVTFGEVWRQNRTSGA 271 (789)
T ss_dssp EECSSEEEEEEESSCSSSCCCCCCEEEEETTTCC
T ss_pred cCCCCeEEEEEecCCCCCCCCCceEEEEeCCCCc
Confidence 54 78899984 46788888765554
No 296
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=59.12 E-value=1.8e+02 Score=32.15 Aligned_cols=96 Identities=15% Similarity=0.176 Sum_probs=55.0
Q ss_pred cEEEEcC-C---CCEEEEEeCCC---CCCcccCeEEec--CCe--EEEEEC-------CeEEEEECCCCccccceeEEEe
Q 006913 57 TLFAFES-N---GTIAWSLDLDF---TCNIGTAPVHGG--TGE--VYIVAE-------NRVLKVDLLKIGTSESATQVFY 118 (626)
Q Consensus 57 gL~a~d~-~---G~~~W~~~~~~---~~~i~~sp~iD~--dG~--IwVgT~-------ggL~~id~~~~~~~~~~~~~~~ 118 (626)
++|++|. + .+++|++.... .......|.+.. +|+ +.+|.. ..||.+|..++.. .+.+
T Consensus 165 ~~yALDVT~P~~p~~LWe~~~~~~~~LG~t~s~P~I~~~~~g~w~~vfG~GY~~~~~~~~Lyv~d~~tG~l-----i~~i 239 (570)
T 3hx6_A 165 GLFALDVTDPANIKLLWEIGVDQEPDLGYSFPKPTVARLHNGKWAVVTGNGYSSMNDKAALLIIDMETGAI-----TRKL 239 (570)
T ss_dssp EEEEEECSSGGGCEEEEEEETTTCTTCCBCCSCCEEEECTTSSEEEEEECCBSCTTCCEEEEEEETTTCCE-----EEEE
T ss_pred EEEEEECCCCCCCceeEEECCCCccccCccccCCEEEEecCCCEEEEEccccCCCCCccEEEEEECCCCce-----EEEE
Confidence 7999997 3 56889987321 112345565533 444 333331 3799999998753 3333
Q ss_pred cCCCCCCCCCCeeEEEEEEcC-----CeEEEEEcCCeEEEEeCC
Q 006913 119 GTGSGKGGTGAIAGIAVSTSS-----SSVYINVKGRALFAFMTH 157 (626)
Q Consensus 119 ~~~~~~~~~~~~I~s~~~d~d-----G~LwIgT~~gGL~a~d~~ 157 (626)
.........+..-...+.|.+ +.+|+|...+.|+++|..
T Consensus 240 ~~~~~~~~~~Gls~~~~~D~d~Dg~~D~~YaGDl~GnlWRfDl~ 283 (570)
T 3hx6_A 240 EVTGRTGVPNGLSSPRLADNNSDGVADYAYAGDLQGNLWRFDLI 283 (570)
T ss_dssp EECCSTTSCCCEEEEEEECTTSSSBCCEEEEEETTSEEEEEECS
T ss_pred ecCCCCccCCccccceEEecCCCCceeEEEEEeCCCcEEEEEcC
Confidence 221111111122223344544 469999999999999964
No 297
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=56.33 E-value=1.7 Score=34.00 Aligned_cols=24 Identities=21% Similarity=0.123 Sum_probs=17.2
Q ss_pred hhhHHHHHHHHhheeeEEEeeccc
Q 006913 401 FFESVVLLVLAVLVRFCCIFWRKK 424 (626)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~ 424 (626)
+=-.+.+++|+++..|||.=||.+
T Consensus 14 lGg~~~lll~~glcI~ccvkcrhR 37 (70)
T 2klu_A 14 LGGVAGLLLFIGLGIFFSVRSRHR 37 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSCC
T ss_pred HhHHHHHHHHHHHHHHHhhHHHHH
Confidence 344566788999999999944333
No 298
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=55.10 E-value=2.3e+02 Score=30.54 Aligned_cols=151 Identities=12% Similarity=0.037 Sum_probs=82.9
Q ss_pred eEEEEEEcCCeEEEEEcCCeEEEEeCC-CcE-EEEECCcccccccccccccCCCCCccccce--EEEcCCC-e-EEEEcC
Q 006913 131 AGIAVSTSSSSVYINVKGRALFAFMTH-GQL-LWSAGPVLDQLGYRQGCTKTDVDCYFTSVP--VIDQCEG-S-IYISNT 204 (626)
Q Consensus 131 I~s~~~d~dG~LwIgT~~gGL~a~d~~-G~~-~w~~~~~~~~~~~~~~~~~~l~~~~i~ssp--viD~~dG-~-LwIGT~ 204 (626)
+..+.-..++.|..|+.++-|..+|.+ +.. ..... + + ...+ .++ ...+ ++ . |.-|+.
T Consensus 269 v~sv~~s~~~~lasgs~DgtV~lWD~~~~~~~~~~~~------~------H---~~~V-~sv~~~~s~-~g~~~laS~S~ 331 (524)
T 2j04_B 269 ITTFDFLSPTTVVCGFKNGFVAEFDLTDPEVPSFYDQ------V------H---DSYI-LSVSTAYSD-FEDTVVSTVAV 331 (524)
T ss_dssp EEEEEESSSSEEEEEETTSEEEEEETTBCSSCSEEEE------C------S---SSCE-EEEEEECCT-TSCCEEEEEET
T ss_pred EEEEEecCCCeEEEEeCCCEEEEEECCCCCCceEEee------c------c---cccE-EEEEEEcCC-CCCeEEEEecc
Confidence 333333345688888888888888975 422 11110 0 0 0112 223 1222 44 4 556677
Q ss_pred CCeEEEEeCCCCeEE--EEEcCCCCCcceeeeeecCCeEEEEEcCCCEEEEEECCCCcEEEEEecCCCCCceeeEEEeeC
Q 006913 205 QGELYSLSAHSPYFN--WIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPVVDSN 282 (626)
Q Consensus 205 ~GgL~~ld~~tg~~~--w~~~~~s~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~~~sspvvD~d 282 (626)
++.|..+|.++++.. ....... ..+.+++...++..++++..++.+...|..++......... ...+.++...++
T Consensus 332 D~tvklWD~~~~~~~~~~~~~~~~-~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH--~~~V~sva~Sp~ 408 (524)
T 2j04_B 332 DGYFYIFNPKDIATTKTTVSRFRG-SNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSR--ETTITAIGVSRL 408 (524)
T ss_dssp TSEEEEECGGGHHHHCEEEEECSC-CSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEEC--SSCEEEEECCSS
T ss_pred CCeEEEEECCCCCccccccccccc-CcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecC--CCceEEEEeCCC
Confidence 888888888765431 1111111 12345555667766766655567888888777654332211 123445666666
Q ss_pred Ce-EEEEEcCCeEEEEcCCC
Q 006913 283 GW-ISVGSLDGLLYSFSPSG 301 (626)
Q Consensus 283 G~-IWVGT~~gGLy~~d~~g 301 (626)
|. |..|+.++.|..+|..+
T Consensus 409 g~~l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 409 HPMVLAGSADGSLIITNAAR 428 (524)
T ss_dssp CCBCEEEETTTEEECCBSCS
T ss_pred CCeEEEEECCCEEEEEechH
Confidence 64 66678888888888643
No 299
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=53.94 E-value=1.3e+02 Score=31.26 Aligned_cols=74 Identities=12% Similarity=0.121 Sum_probs=44.6
Q ss_pred cceeeeeecC-CeEE-EEEcCCCEEEEEECCCCcEEEEEecCCCCCceeeEEEeeCC-eEEEEEcCCeEEEEcCCCCEEE
Q 006913 229 KAFTLTPGNN-GYLY-VTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPVVDSNG-WISVGSLDGLLYSFSPSGVLNK 305 (626)
Q Consensus 229 ~v~sI~~D~d-G~Lw-VGT~~gG~l~alD~~tG~~~w~~~~~~l~~~~sspvvD~dG-~IWVGT~~gGLy~~d~~g~~~~ 305 (626)
.+.++....+ +.++ .++ .++.+...|..++......... ...+.++...++| .|.+|+.++.|..+|..++...
T Consensus 151 ~V~~v~~~p~~~~~las~s-~Dg~v~iwD~~~~~~~~~~~~~--~~~v~~v~wspdg~~lasgs~dg~v~iwd~~~~~~~ 227 (434)
T 2oit_A 151 MVIDMKWNPTVPSMVAVCL-ADGSIAVLQVTETVKVCATLPS--TVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQEKK 227 (434)
T ss_dssp SEEEEEECSSCTTEEEEEE-TTSCEEEEEESSSEEEEEEECG--GGCEEEEEECTTSSCEEEEETTSCEEEECTTCCEEE
T ss_pred ceEEEEECCCCCCEEEEEE-CCCeEEEEEcCCCcceeeccCC--CCceeEEEEcCCCCEEEEEcCCCcEEEEccCCcccc
Confidence 3555555444 4444 455 4567877887777544322111 1124556666565 6888999999999998765443
No 300
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=53.37 E-value=1.6e+02 Score=28.37 Aligned_cols=181 Identities=10% Similarity=0.074 Sum_probs=90.5
Q ss_pred eCCEEEEEe--C----CcEEEEcC-CCCEEEEEeCCCCCCc-ccCeEEecCCeEEEEE--C------CeEEEEECCCCcc
Q 006913 46 EDGKIYACS--E----KTLFAFES-NGTIAWSLDLDFTCNI-GTAPVHGGTGEVYIVA--E------NRVLKVDLLKIGT 109 (626)
Q Consensus 46 ~dG~IwIgS--d----ggL~a~d~-~G~~~W~~~~~~~~~i-~~sp~iD~dG~IwVgT--~------ggL~~id~~~~~~ 109 (626)
.++.||+.. + +.+++||. ++ .|.......... ..+.+. -++.||+.. + +.++++|+.+.
T Consensus 54 ~~~~lyv~GG~~~~~~~~~~~~d~~~~--~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~d~~~~-- 128 (306)
T 3ii7_A 54 WDNVVYILGGSQLFPIKRMDCYNVVKD--SWYSKLGPPTPRDSLAACA-AEGKIYTSGGSEVGNSALYLFECYDTRTE-- 128 (306)
T ss_dssp ETTEEEEECCBSSSBCCEEEEEETTTT--EEEEEECCSSCCBSCEEEE-ETTEEEEECCBBTTBSCCCCEEEEETTTT--
T ss_pred ECCEEEEEeCCCCCCcceEEEEeCCCC--eEEECCCCCccccceeEEE-ECCEEEEECCCCCCCcEeeeEEEEeCCCC--
Confidence 578898843 2 46889998 44 454432211111 222222 367888853 2 35899999875
Q ss_pred ccceeEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEc----------CCeEEEEeCCCcEEEEECCccccccccccccc
Q 006913 110 SESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVK----------GRALFAFMTHGQLLWSAGPVLDQLGYRQGCTK 179 (626)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~----------~gGL~a~d~~G~~~w~~~~~~~~~~~~~~~~~ 179 (626)
.|....... . . .........++.||+... ...+++||+... .|..-. .++ .
T Consensus 129 -----~W~~~~~~p-~--~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~-~W~~~~---~~p------~ 189 (306)
T 3ii7_A 129 -----SWHTKPSML-T--Q-RCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATE-TWTELC---PMI------E 189 (306)
T ss_dssp -----EEEEECCCS-S--C-CBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTT-EEEEEC---CCS------S
T ss_pred -----ceEeCCCCc-C--C-cceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCC-eEEECC---Ccc------c
Confidence 443322111 0 1 111122234778887421 344788998633 476311 111 0
Q ss_pred CCCCCccccceEEEcCCCeEEEEcC------CCeEEEEeCCCCeEEEEEcCC--CCCcceeeeeecCCeEEEEEcC----
Q 006913 180 TDVDCYFTSVPVIDQCEGSIYISNT------QGELYSLSAHSPYFNWIQDLS--SFDKAFTLTPGNNGYLYVTIPV---- 247 (626)
Q Consensus 180 ~l~~~~i~sspviD~~dG~LwIGT~------~GgL~~ld~~tg~~~w~~~~~--s~~~v~sI~~D~dG~LwVGT~~---- 247 (626)
... ..+.+.. ++.||+-.. ...+++||+.+++ |..-.. ......+.+. .++.|||..-.
T Consensus 190 ~r~----~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~ 260 (306)
T 3ii7_A 190 ARK----NHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNE--WKMVSPMPWKGVTVKCAA-VGSIVYVLAGFQGVG 260 (306)
T ss_dssp CCB----SCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTTE--EEECCCCSCCBSCCEEEE-ETTEEEEEECBCSSS
T ss_pred hhh----cceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCc--EEECCCCCCCccceeEEE-ECCEEEEEeCcCCCe
Confidence 000 1122333 677887422 1348899998764 764321 1111112222 26788876421
Q ss_pred -CCEEEEEECCCC
Q 006913 248 -RALVLALDTSSG 259 (626)
Q Consensus 248 -gG~l~alD~~tG 259 (626)
...++.+|+.++
T Consensus 261 ~~~~~~~yd~~~~ 273 (306)
T 3ii7_A 261 RLGHILEYNTETD 273 (306)
T ss_dssp BCCEEEEEETTTT
T ss_pred eeeeEEEEcCCCC
Confidence 135677887665
No 301
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=51.87 E-value=43 Score=34.80 Aligned_cols=76 Identities=9% Similarity=-0.060 Sum_probs=52.4
Q ss_pred EEEcCCCeEEEEcC-C--------CeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCCe-EEEEEc-CCCEEEEEECCCC
Q 006913 191 VIDQCEGSIYISNT-Q--------GELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGY-LYVTIP-VRALVLALDTSSG 259 (626)
Q Consensus 191 viD~~dG~LwIGT~-~--------GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG~-LwVGT~-~gG~l~alD~~tG 259 (626)
.++..++.+|++.. + +++..+|..+++..-..+.+. ....++...||+ +|++.. ..+.+..+|..++
T Consensus 270 ~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~--~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~ 347 (368)
T 1mda_H 270 AKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH--DSDAIIAAQDGASDNYANSAGTEVLDIYDAASD 347 (368)
T ss_dssp EEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE--EECEEEECCSSSCEEEEEETTTTEEEEEESSSC
T ss_pred EEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC--CcceEEECCCCCEEEEEccCCCCeEEEEECCCC
Confidence 45543678999864 2 478899999987654332221 234566777775 899886 4689999999999
Q ss_pred cEEEEEecC
Q 006913 260 NILWHKSVG 268 (626)
Q Consensus 260 ~~~w~~~~~ 268 (626)
+.+-....+
T Consensus 348 kvv~~I~vg 356 (368)
T 1mda_H 348 QDQSSVELD 356 (368)
T ss_dssp EEEEECCCC
T ss_pred cEEEEEECC
Confidence 887665444
No 302
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=51.36 E-value=2.8e+02 Score=30.55 Aligned_cols=105 Identities=10% Similarity=0.048 Sum_probs=56.5
Q ss_pred CCeEEEEcCCC----eEEEEeCCCCeE-EEEEcCCCC--CcceeeeeecCCeEEEEEcCCC--EEEEEECCCCcEEEEEe
Q 006913 196 EGSIYISNTQG----ELYSLSAHSPYF-NWIQDLSSF--DKAFTLTPGNNGYLYVTIPVRA--LVLALDTSSGNILWHKS 266 (626)
Q Consensus 196 dG~LwIGT~~G----gL~~ld~~tg~~-~w~~~~~s~--~~v~sI~~D~dG~LwVGT~~gG--~l~alD~~tG~~~w~~~ 266 (626)
++.|++.+..+ .|+.+|.+++.. .|..-.... ..+..+....++.|++....++ .++.++..+|+......
T Consensus 297 g~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~ 376 (710)
T 2xdw_A 297 GTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFP 376 (710)
T ss_dssp TTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEEC
T ss_pred CCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecC
Confidence 67788776533 599999887642 232211111 1233344434666666654333 47778876777554433
Q ss_pred cCCCCCceeeEEEeeCC-eEEEEEc----CCeEEEEcCC-CC
Q 006913 267 VGPLGSAEYAPVVDSNG-WISVGSL----DGLLYSFSPS-GV 302 (626)
Q Consensus 267 ~~~l~~~~sspvvD~dG-~IWVGT~----~gGLy~~d~~-g~ 302 (626)
.. ...+..+...+++ .+++... .+.||.+|.. ++
T Consensus 377 ~~--~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 377 LE--VGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp CC--SSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred CC--CceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 32 1223334444444 5666532 3579999864 55
No 303
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=50.48 E-value=2.7e+02 Score=30.04 Aligned_cols=113 Identities=13% Similarity=0.015 Sum_probs=58.0
Q ss_pred cceEEEcCCC-eEEEEcCC--------CeEEEEeCC-CC---eEEEEEcCCCCCcceeeeeecCCeEEEEEcCCC--EEE
Q 006913 188 SVPVIDQCEG-SIYISNTQ--------GELYSLSAH-SP---YFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRA--LVL 252 (626)
Q Consensus 188 sspviD~~dG-~LwIGT~~--------GgL~~ld~~-tg---~~~w~~~~~s~~~v~sI~~D~dG~LwVGT~~gG--~l~ 252 (626)
..+...+ +| .|.+...+ ..|+.+|.+ +| ........ ....+..+.-..||++++.+..++ .++
T Consensus 191 ~~~~~Sp-DG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~-~~~~~~~~~~spdg~l~~~~~~~~~~~l~ 268 (662)
T 3azo_A 191 TGPRLSP-DGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGG-PEEAIAQAEWAPDGSLIVATDRTGWWNLH 268 (662)
T ss_dssp CCCEECT-TSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEE-TTBCEEEEEECTTSCEEEEECTTSSCEEE
T ss_pred cCceECC-CCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCC-CCceEcceEECCCCeEEEEECCCCCeEEE
Confidence 3455554 44 45544432 368999988 46 33222111 112334455556787777765445 788
Q ss_pred EEECCCCcEEEEEecCC-CCC-----ceeeEEEeeCCeEEEEEc--CCeEEEEcCCCC
Q 006913 253 ALDTSSGNILWHKSVGP-LGS-----AEYAPVVDSNGWISVGSL--DGLLYSFSPSGV 302 (626)
Q Consensus 253 alD~~tG~~~w~~~~~~-l~~-----~~sspvvD~dG~IWVGT~--~gGLy~~d~~g~ 302 (626)
.+|..+|+......... ... -...+...++|.+++... ...|+.++.++.
T Consensus 269 ~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~ 326 (662)
T 3azo_A 269 RVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGKGAAVLGILDPESG 326 (662)
T ss_dssp EECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBSSSCEEEEEETTTT
T ss_pred EEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEcCccEEEEEECCCC
Confidence 88877776543221110 000 012344444666665442 235777787543
No 304
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=48.92 E-value=1.9e+02 Score=27.78 Aligned_cols=184 Identities=10% Similarity=0.089 Sum_probs=90.9
Q ss_pred eCCEEEEEe--C-----CcEEEEcC-CCC-EEEEEeCCCCCCc-ccCeEEecCCeEEEEE-------CCeEEEEECCCCc
Q 006913 46 EDGKIYACS--E-----KTLFAFES-NGT-IAWSLDLDFTCNI-GTAPVHGGTGEVYIVA-------ENRVLKVDLLKIG 108 (626)
Q Consensus 46 ~dG~IwIgS--d-----ggL~a~d~-~G~-~~W~~~~~~~~~i-~~sp~iD~dG~IwVgT-------~ggL~~id~~~~~ 108 (626)
.++.||+.. + +.+++||. +++ ..|.......... ..+.+. -++.||+.. .+.++++|+.+.
T Consensus 61 ~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~- 138 (301)
T 2vpj_A 61 LHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATT-LGDMIYVSGGFDGSRRHTSMERYDPNID- 138 (301)
T ss_dssp ETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTT-
T ss_pred ECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEE-ECCEEEEEcccCCCcccceEEEEcCCCC-
Confidence 578888842 2 35899997 544 2365432211111 222232 367888863 136899998875
Q ss_pred cccceeEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEE------cCCeEEEEeCCCcEEEEECCcccccccccccccCCC
Q 006913 109 TSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINV------KGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDV 182 (626)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT------~~gGL~a~d~~G~~~w~~~~~~~~~~~~~~~~~~l~ 182 (626)
.|...... +. . .........++.||+.. ..+.+.+||+... .|..-. .++ ....
T Consensus 139 ------~W~~~~~~-p~--~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~-~W~~~~---~~p------~~r~ 198 (301)
T 2vpj_A 139 ------QWSMLGDM-QT--A-REGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTG-HWTNVT---PMA------TKRS 198 (301)
T ss_dssp ------EEEEEEEC-SS--C-CBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTT-EEEEEC---CCS------SCCB
T ss_pred ------eEEECCCC-CC--C-cccceEEEECCEEEEECCCCCCcccceEEEEeCCCC-cEEeCC---CCC------cccc
Confidence 33321110 00 1 11112223478888752 1245889998643 476311 111 0000
Q ss_pred CCccccceEEEcCCCeEEEEcC------CCeEEEEeCCCCeEEEEEcC--CCCCcceeeeeecCCeEEEEEcCC-----C
Q 006913 183 DCYFTSVPVIDQCEGSIYISNT------QGELYSLSAHSPYFNWIQDL--SSFDKAFTLTPGNNGYLYVTIPVR-----A 249 (626)
Q Consensus 183 ~~~i~sspviD~~dG~LwIGT~------~GgL~~ld~~tg~~~w~~~~--~s~~~v~sI~~D~dG~LwVGT~~g-----G 249 (626)
..+.+.. ++.||+-.. ...+++||+.+++ |..-. +......+.+. .++.|||..... .
T Consensus 199 ----~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~ 269 (301)
T 2vpj_A 199 ----GAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDS--WTTVTSMTTPRCYVGATV-LRGRLYAIAGYDGNSLLS 269 (301)
T ss_dssp ----SCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTE--EEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSSBEE
T ss_pred ----cceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCc--EEECCCCCCcccceeEEE-ECCEEEEEcCcCCCcccc
Confidence 1122333 678876432 2358999998764 65322 11111122222 367888764111 2
Q ss_pred EEEEEECCCCc
Q 006913 250 LVLALDTSSGN 260 (626)
Q Consensus 250 ~l~alD~~tG~ 260 (626)
.++.+|+.+++
T Consensus 270 ~v~~yd~~~~~ 280 (301)
T 2vpj_A 270 SIECYDPIIDS 280 (301)
T ss_dssp EEEEEETTTTE
T ss_pred cEEEEcCCCCe
Confidence 46777876653
No 305
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=47.58 E-value=3.2e+02 Score=30.09 Aligned_cols=113 Identities=10% Similarity=0.091 Sum_probs=54.3
Q ss_pred eEEEcCCCeEEEEcC-----CCeEEEEeCCC------C--eEEEEEcCCCCCcceeeeeecCCeEEEEEcCC---CEEEE
Q 006913 190 PVIDQCEGSIYISNT-----QGELYSLSAHS------P--YFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVR---ALVLA 253 (626)
Q Consensus 190 pviD~~dG~LwIGT~-----~GgL~~ld~~t------g--~~~w~~~~~s~~~v~sI~~D~dG~LwVGT~~g---G~l~a 253 (626)
+...+++..|.++.. ...|+.+|.++ + ....... .............+.||+.+..+ ..++.
T Consensus 238 ~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~--~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~ 315 (710)
T 2xdw_A 238 AELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLID--NFEGEYDYVTNEGTVFTFKTNRHSPNYRLIN 315 (710)
T ss_dssp EEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEEC--SSSSCEEEEEEETTEEEEEECTTCTTCEEEE
T ss_pred EEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeC--CCCcEEEEEeccCCEEEEEECCCCCCCEEEE
Confidence 444432344555443 45688888775 4 2222221 11112222111245788877532 36888
Q ss_pred EECCCCcE-EEEEecCCCC-CceeeEEEeeCCeEEEEEcCC---eEEEEcC-CCCEE
Q 006913 254 LDTSSGNI-LWHKSVGPLG-SAEYAPVVDSNGWISVGSLDG---LLYSFSP-SGVLN 304 (626)
Q Consensus 254 lD~~tG~~-~w~~~~~~l~-~~~sspvvD~dG~IWVGT~~g---GLy~~d~-~g~~~ 304 (626)
+|..++.. .|........ ..+..+....++.+++....+ .|+.++. +|+..
T Consensus 316 ~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~ 372 (710)
T 2xdw_A 316 IDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALL 372 (710)
T ss_dssp EETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEE
T ss_pred EeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEE
Confidence 88777642 2322122111 123334444366666655433 4778886 56643
No 306
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=45.25 E-value=81 Score=32.82 Aligned_cols=58 Identities=9% Similarity=0.163 Sum_probs=42.0
Q ss_pred ecCCeEEEEEcCCCEEEEEECCCCcEEEEEecCCCCCceeeEEEeeCCeEEEEE---cCCeEEEEcCCCCEEEEe
Q 006913 236 GNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPVVDSNGWISVGS---LDGLLYSFSPSGVLNKFS 307 (626)
Q Consensus 236 D~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~~~sspvvD~dG~IWVGT---~~gGLy~~d~~g~~~~~~ 307 (626)
+..|-||+-| ..|.++.+|.+||..+..-.+. ...|++++ ..+|+++++.+|++....
T Consensus 269 ~kygviyviT-K~G~ihlyDleTgt~i~~nrIS-------------~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~ 329 (365)
T 2xzh_A 269 EKHDVVFLIT-KYGYIHLYDLETGTCIYMNRIS-------------GETIFVTAPHEATAGIIGVNRKGQVLSVC 329 (365)
T ss_dssp TTTTEEEEEE-TTSEEEEEETTTCCEEEEEECC-------------SSCEEEEEEEGGGTEEEEEETTCEEEEEE
T ss_pred ccCCEEEEEe-CCcEEEEEEcccCcEEEEeccC-------------CCceEEecccCCCCcEEEEcCCCEEEEEE
Confidence 4688999999 4689999999999988654443 23344443 247999999888876543
No 307
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=44.94 E-value=94 Score=33.66 Aligned_cols=103 Identities=9% Similarity=-0.002 Sum_probs=56.4
Q ss_pred CCeEEEEcCCCeEEEEeCCCCeE-EEEEcCCCCCcceee--eeecCC-eEEEEEcCCCEEEEEECCCCcEEEEE-ecCCC
Q 006913 196 EGSIYISNTQGELYSLSAHSPYF-NWIQDLSSFDKAFTL--TPGNNG-YLYVTIPVRALVLALDTSSGNILWHK-SVGPL 270 (626)
Q Consensus 196 dG~LwIGT~~GgL~~ld~~tg~~-~w~~~~~s~~~v~sI--~~D~dG-~LwVGT~~gG~l~alD~~tG~~~w~~-~~~~l 270 (626)
++.|..|+.+|.|..+|.+++.. ..... .....+.++ ....+| .+.+....++.+...|..+++..... ....
T Consensus 277 ~~~lasgs~DgtV~lWD~~~~~~~~~~~~-~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~- 354 (524)
T 2j04_B 277 PTTVVCGFKNGFVAEFDLTDPEVPSFYDQ-VHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFR- 354 (524)
T ss_dssp SSEEEEEETTSEEEEEETTBCSSCSEEEE-CSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECS-
T ss_pred CCeEEEEeCCCEEEEEECCCCCCceEEee-cccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccc-
Confidence 56888999999999999986532 11111 112245555 234556 55444334578877887665432111 1110
Q ss_pred CCceeeEEEeeCCeEEEE-EcCCeEEEEcCC
Q 006913 271 GSAEYAPVVDSNGWISVG-SLDGLLYSFSPS 300 (626)
Q Consensus 271 ~~~~sspvvD~dG~IWVG-T~~gGLy~~d~~ 300 (626)
...+.++...+++..++. +.++.+..+|..
T Consensus 355 ~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~ 385 (524)
T 2j04_B 355 GSNLVPVVYCPQIYSYIYSDGASSLRAVPSR 385 (524)
T ss_dssp CCSCCCEEEETTTTEEEEECSSSEEEEEETT
T ss_pred cCcccceEeCCCcCeEEEeCCCCcEEEEECc
Confidence 001234556666755554 456678788754
No 308
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=44.08 E-value=2.1e+02 Score=26.92 Aligned_cols=146 Identities=8% Similarity=-0.023 Sum_probs=77.0
Q ss_pred cCCeEEEEECCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEcCC-eEEEEEcCCeEEEEeCC-CcEEEEE
Q 006913 87 GTGEVYIVAENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSS-SVYINVKGRALFAFMTH-GQLLWSA 164 (626)
Q Consensus 87 ~dG~IwVgT~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG-~LwIgT~~gGL~a~d~~-G~~~w~~ 164 (626)
.++.|-+|.++.|...|..++.. ...+... .. ...|..+....++ .|..|+.++.+..++.. ++.+...
T Consensus 35 ~~~~lAvg~D~tV~iWd~~tg~~-----~~~~~~~---~~-~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~ 105 (318)
T 4ggc_A 35 SGNVLAVALDNSVYLWSASSGDI-----LQLLQME---QP-GEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM 105 (318)
T ss_dssp TTSEEEEEETTEEEEEETTTCCE-----EEEEECC---ST-TCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred CCCEEEEEeCCEEEEEECCCCCE-----EEEEEec---CC-CCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEe
Confidence 44545555688999999887642 1111110 11 2244555444454 46677888888888975 7765543
Q ss_pred CCcccccccccccccCCCCCccccceEEEcCCCeEEEEcCCCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCCe-EEE
Q 006913 165 GPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGY-LYV 243 (626)
Q Consensus 165 ~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG~-LwV 243 (626)
.. +. ..+ .....+ ...+..|..++.+...+..++.............+..+....+|. |..
T Consensus 106 ~~------------h~---~~~-~~~~~~--~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s 167 (318)
T 4ggc_A 106 TS------------HS---ARV-GSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLAS 167 (318)
T ss_dssp EC------------CS---SCE-EEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred cC------------cc---ceE-EEeecC--CCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEE
Confidence 10 00 011 122233 456677777777776766654332221111122334444555664 444
Q ss_pred EEcCCCEEEEEECCCCc
Q 006913 244 TIPVRALVLALDTSSGN 260 (626)
Q Consensus 244 GT~~gG~l~alD~~tG~ 260 (626)
+. ..+.+...|..+++
T Consensus 168 ~~-~d~~i~iwd~~~~~ 183 (318)
T 4ggc_A 168 GG-NDNLVNVWPSAPGE 183 (318)
T ss_dssp EE-TTSCEEEEESSCBT
T ss_pred Ee-cCcceeEEECCCCc
Confidence 44 45677777877664
No 309
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=44.02 E-value=2.3e+02 Score=27.27 Aligned_cols=186 Identities=12% Similarity=0.156 Sum_probs=92.4
Q ss_pred eCCEEEEEe--C-----CcEEEEcCCCCEEEEEeCCCCCCc-ccCeEEecCCeEEEEE--C-----CeEEEEECCCCccc
Q 006913 46 EDGKIYACS--E-----KTLFAFESNGTIAWSLDLDFTCNI-GTAPVHGGTGEVYIVA--E-----NRVLKVDLLKIGTS 110 (626)
Q Consensus 46 ~dG~IwIgS--d-----ggL~a~d~~G~~~W~~~~~~~~~i-~~sp~iD~dG~IwVgT--~-----ggL~~id~~~~~~~ 110 (626)
.++.||+.. + +.+++||.... .|.......... ..+.+. -++.||+.. + +.+.++|+.+.
T Consensus 60 ~~~~lyv~GG~~~~~~~~~~~~~d~~~~-~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~--- 134 (302)
T 2xn4_A 60 MAGLVFAVGGFNGSLRVRTVDSYDPVKD-QWTSVANMRDRRSTLGAAV-LNGLLYAVGGFDGSTGLSSVEAYNIKSN--- 134 (302)
T ss_dssp ETTEEEEESCBCSSSBCCCEEEEETTTT-EEEEECCCSSCCBSCEEEE-ETTEEEEEEEECSSCEEEEEEEEETTTT---
T ss_pred ECCEEEEEeCcCCCccccceEEECCCCC-ceeeCCCCCccccceEEEE-ECCEEEEEcCCCCCccCceEEEEeCCCC---
Confidence 578898843 1 35889998322 465433211111 122222 367888743 2 35888998875
Q ss_pred cceeEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEc--------CCeEEEEeCCCcEEEEECCcccccccccccccCCC
Q 006913 111 ESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVK--------GRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDV 182 (626)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~--------~gGL~a~d~~G~~~w~~~~~~~~~~~~~~~~~~l~ 182 (626)
.|....... . . .........++.||+..- ...+.+||+... .|..-. .++ ....
T Consensus 135 ----~W~~~~~~p-~--~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~-~W~~~~---~~p------~~r~ 196 (302)
T 2xn4_A 135 ----EWFHVAPMN-T--R-RSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTN-EWTYIA---EMS------TRRS 196 (302)
T ss_dssp ----EEEEECCCS-S--C-CBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTT-EEEEEC---CCS------SCCB
T ss_pred ----eEeecCCCC-C--c-ccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCC-cEEECC---CCc------cccc
Confidence 443222111 1 1 111122234788887421 245888998633 476311 111 0000
Q ss_pred CCccccceEEEcCCCeEEEEc-C-----CCeEEEEeCCCCeEEEEEcCC--CCCcceeeeeecCCeEEEEEcCC-----C
Q 006913 183 DCYFTSVPVIDQCEGSIYISN-T-----QGELYSLSAHSPYFNWIQDLS--SFDKAFTLTPGNNGYLYVTIPVR-----A 249 (626)
Q Consensus 183 ~~~i~sspviD~~dG~LwIGT-~-----~GgL~~ld~~tg~~~w~~~~~--s~~~v~sI~~D~dG~LwVGT~~g-----G 249 (626)
..+.+.. ++.||+-. . ...+++||+.+++ |..-.. ......+++. .++.|||..-.. .
T Consensus 197 ----~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~r~~~~~~~-~~~~i~v~GG~~~~~~~~ 267 (302)
T 2xn4_A 197 ----GAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNA--WRQVADMNMCRRNAGVCA-VNGLLYVVGGDDGSCNLA 267 (302)
T ss_dssp ----SCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTE--EEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSSBCC
T ss_pred ----cccEEEE--CCEEEEECCCCCCcccceEEEEeCCCCC--EeeCCCCCCccccCeEEE-ECCEEEEECCcCCCcccc
Confidence 1122333 67888643 2 2358999998764 654221 1111122222 377888764211 2
Q ss_pred EEEEEECCCCcEEEEE
Q 006913 250 LVLALDTSSGNILWHK 265 (626)
Q Consensus 250 ~l~alD~~tG~~~w~~ 265 (626)
.+..+|+.++ .|..
T Consensus 268 ~v~~yd~~~~--~W~~ 281 (302)
T 2xn4_A 268 SVEYYNPTTD--KWTV 281 (302)
T ss_dssp CEEEEETTTT--EEEE
T ss_pred cEEEEcCCCC--eEEE
Confidence 3778887766 4654
No 310
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=43.39 E-value=3.1 Score=29.22 Aligned_cols=13 Identities=23% Similarity=0.383 Sum_probs=7.9
Q ss_pred heeeEEEeecccc
Q 006913 413 LVRFCCIFWRKKK 425 (626)
Q Consensus 413 ~~~~~~~~~~~~~ 425 (626)
++-.+++|||+||
T Consensus 29 iv~~~~~~~rRr~ 41 (41)
T 2k9y_A 29 LAGVGFFIHRRRK 41 (41)
T ss_dssp HHHHHHSSSSSCC
T ss_pred HHHHheeEeeecC
Confidence 3444566788765
No 311
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=41.23 E-value=2.5e+02 Score=26.91 Aligned_cols=212 Identities=13% Similarity=0.151 Sum_probs=99.5
Q ss_pred cEEEEcCCCCEEEEEeCCCCCCc-ccCeEEecCCeEEEEE--C-----CeEEEEECCCCccccceeEEEecCCCCCCCCC
Q 006913 57 TLFAFESNGTIAWSLDLDFTCNI-GTAPVHGGTGEVYIVA--E-----NRVLKVDLLKIGTSESATQVFYGTGSGKGGTG 128 (626)
Q Consensus 57 gL~a~d~~G~~~W~~~~~~~~~i-~~sp~iD~dG~IwVgT--~-----ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (626)
.+++||.... .|.......... ..+.+. .++.||+.. + +.++++|+.+... ..|...... +. .
T Consensus 32 ~~~~~d~~~~-~W~~~~~~p~~r~~~~~~~-~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~----~~W~~~~~~-p~--~ 102 (301)
T 2vpj_A 32 VVEKYDPKTQ-EWSFLPSITRKRRYVASVS-LHDRIYVIGGYDGRSRLSSVECLDYTADED----GVWYSVAPM-NV--R 102 (301)
T ss_dssp CEEEEETTTT-EEEECCCCSSCCBSCEEEE-ETTEEEEECCBCSSCBCCCEEEEETTCCTT----CCCEEECCC-SS--C
T ss_pred EEEEEcCCCC-eEEeCCCCChhhccccEEE-ECCEEEEEcCCCCCccCceEEEEECCCCCC----CeeEECCCC-CC--C
Confidence 5899998332 465432211111 222232 457888753 1 4689999887530 013211111 00 1
Q ss_pred CeeEEEEEEcCCeEEEEEc------CCeEEEEeCCCcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEE
Q 006913 129 AIAGIAVSTSSSSVYINVK------GRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYIS 202 (626)
Q Consensus 129 ~~I~s~~~d~dG~LwIgT~------~gGL~a~d~~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIG 202 (626)
.........++.||+..- .+.++.||+... .|..-+ ..+ .... ..+.+.. ++.||+-
T Consensus 103 -r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~-~W~~~~---~~p------~~r~----~~~~~~~--~~~iyv~ 165 (301)
T 2vpj_A 103 -RGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNID-QWSMLG---DMQ------TARE----GAGLVVA--SGVIYCL 165 (301)
T ss_dssp -CBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTT-EEEEEE---ECS------SCCB----SCEEEEE--TTEEEEE
T ss_pred -ccceeEEEECCEEEEEcccCCCcccceEEEEcCCCC-eEEECC---CCC------CCcc----cceEEEE--CCEEEEE
Confidence 111112223788887531 235889998633 365311 111 0000 1112333 6788874
Q ss_pred cC------CCeEEEEeCCCCeEEEEEcC--CCCCcceeeeeecCCeEEEEEcC-----CCEEEEEECCCCcEEEEEecC-
Q 006913 203 NT------QGELYSLSAHSPYFNWIQDL--SSFDKAFTLTPGNNGYLYVTIPV-----RALVLALDTSSGNILWHKSVG- 268 (626)
Q Consensus 203 T~------~GgL~~ld~~tg~~~w~~~~--~s~~~v~sI~~D~dG~LwVGT~~-----gG~l~alD~~tG~~~w~~~~~- 268 (626)
.. ...+++||+.++ .|..-. +......+++. .++.|||.... ...++.+|+.++ .|.....
T Consensus 166 GG~~~~~~~~~~~~~d~~~~--~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~--~W~~~~~~ 240 (301)
T 2vpj_A 166 GGYDGLNILNSVEKYDPHTG--HWTNVTPMATKRSGAGVAL-LNDHIYVVGGFDGTAHLSSVEAYNIRTD--SWTTVTSM 240 (301)
T ss_dssp CCBCSSCBCCCEEEEETTTT--EEEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSSBCCCEEEEETTTT--EEEEECCC
T ss_pred CCCCCCcccceEEEEeCCCC--cEEeCCCCCcccccceEEE-ECCEEEEEeCCCCCcccceEEEEeCCCC--cEEECCCC
Confidence 32 235899999886 465422 11111122222 36788886411 135788998776 4653222
Q ss_pred CCCCceeeEEEeeCCeEEEEE-cC-----CeEEEEcCC
Q 006913 269 PLGSAEYAPVVDSNGWISVGS-LD-----GLLYSFSPS 300 (626)
Q Consensus 269 ~l~~~~sspvvD~dG~IWVGT-~~-----gGLy~~d~~ 300 (626)
+......+.+.. ++.||+-. .+ ..+++||+.
T Consensus 241 p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~ 277 (301)
T 2vpj_A 241 TTPRCYVGATVL-RGRLYAIAGYDGNSLLSSIECYDPI 277 (301)
T ss_dssp SSCCBSCEEEEE-TTEEEEECCBCSSSBEEEEEEEETT
T ss_pred CCcccceeEEEE-CCEEEEEcCcCCCcccccEEEEcCC
Confidence 111122223333 67777743 11 235566654
No 312
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=40.34 E-value=2.4e+02 Score=29.32 Aligned_cols=101 Identities=18% Similarity=0.036 Sum_probs=64.2
Q ss_pred eEEEcCCCeEEEEcCCCeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCCeEEEEEcCCCEEEEEECCCCcEEEEEecCC
Q 006913 190 PVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNILWHKSVGP 269 (626)
Q Consensus 190 pviD~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~ 269 (626)
+..| +..|+++ .+++|..+|..+.........-.. .+..+..- ..++.+++. +|.++.+|.+++..... .
T Consensus 93 l~fd--~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~-~v~~i~~~-~p~~av~~~-dG~L~v~dl~~~~~~~~---~- 162 (388)
T 1xip_A 93 VCFH--GDQVLVS-TRNALYSLDLEELSEFRTVTSFEK-PVFQLKNV-NNTLVILNS-VNDLSALDLRTKSTKQL---A- 162 (388)
T ss_dssp EEEE--TTEEEEE-ESSEEEEEESSSTTCEEEEEECSS-CEEEEEEC-SSEEEEEET-TSEEEEEETTTCCEEEE---E-
T ss_pred EEEC--CCEEEEE-cCCcEEEEEchhhhccCccceeec-ceeeEEec-CCCEEEEEC-CCCEEEEEccCCccccc---c-
Confidence 4445 7889999 678999999876543332221111 12233222 224777774 57888889887765421 1
Q ss_pred CCCceeeEEEeeCCeEEEEEcCCeEEEEcCCCCE
Q 006913 270 LGSAEYAPVVDSNGWISVGSLDGLLYSFSPSGVL 303 (626)
Q Consensus 270 l~~~~sspvvD~dG~IWVGT~~gGLy~~d~~g~~ 303 (626)
..+++....++| +.+|..+|.+.+|++++..
T Consensus 163 --~~Vs~v~WSpkG-~~vg~~dg~i~~~~~~~~~ 193 (388)
T 1xip_A 163 --QNVTSFDVTNSQ-LAVLLKDRSFQSFAWRNGE 193 (388)
T ss_dssp --ESEEEEEECSSE-EEEEETTSCEEEEEEETTE
T ss_pred --CCceEEEEcCCc-eEEEEcCCcEEEEcCCCcc
Confidence 124567777788 7889999999999887544
No 313
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=38.87 E-value=1.7e+02 Score=28.51 Aligned_cols=112 Identities=11% Similarity=0.062 Sum_probs=0.0
Q ss_pred ccceEEEcCCCeEEEEcCCCeEEEEeCCCCeEEEEEcCCC-CCcceeeeeecC--CeEEEEEcCCCEEEEEECCCCcEEE
Q 006913 187 TSVPVIDQCEGSIYISNTQGELYSLSAHSPYFNWIQDLSS-FDKAFTLTPGNN--GYLYVTIPVRALVLALDTSSGNILW 263 (626)
Q Consensus 187 ~sspviD~~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s-~~~v~sI~~D~d--G~LwVGT~~gG~l~alD~~tG~~~w 263 (626)
..++..+..+..|..|+.++.|..+|.+++.........+ ...+.++....+ |.+.+....++.+...|..++....
T Consensus 16 V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~ 95 (316)
T 3bg1_A 16 IHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEK 95 (316)
T ss_dssp EEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCE
T ss_pred EEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceE
Q ss_pred EEecCCCCCceeeEEEee---CCeEEEEEcCCeEEEEc
Q 006913 264 HKSVGPLGSAEYAPVVDS---NGWISVGSLDGLLYSFS 298 (626)
Q Consensus 264 ~~~~~~l~~~~sspvvD~---dG~IWVGT~~gGLy~~d 298 (626)
..........+.++...+ ...|..|+.++.+..++
T Consensus 96 ~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd 133 (316)
T 3bg1_A 96 SHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLT 133 (316)
T ss_dssp EEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEE
T ss_pred EEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEe
No 314
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=38.59 E-value=63 Score=35.96 Aligned_cols=56 Identities=11% Similarity=0.076 Sum_probs=34.3
Q ss_pred eEEEcCCCeEEEEcCC-------------CeEEEEeCCCCeEEEEEcCCCCCcceeeeeecCC-eEEEEEc
Q 006913 190 PVIDQCEGSIYISNTQ-------------GELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNG-YLYVTIP 246 (626)
Q Consensus 190 pviD~~dG~LwIGT~~-------------GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG-~LwVGT~ 246 (626)
+++|+ +|+|||+|.. ++++++++++|++.-....+....+..++...|+ .|||+..
T Consensus 481 L~fd~-~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~vQ 550 (592)
T 4a9v_A 481 LGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp EEECT-TCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEE
T ss_pred eEECC-CCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEEe
Confidence 56786 8999997642 2789999988876544332211123334444444 6777753
No 315
>1gk7_A Vimentin; intermediate filament, heptad repeat; 1.4A {Homo sapiens} SCOP: h.1.20.1 PDB: 3g1e_A
Probab=38.00 E-value=11 Score=26.36 Aligned_cols=25 Identities=20% Similarity=0.420 Sum_probs=20.3
Q ss_pred chHHHHHHhhhhhhhhhhhhhhhHH
Q 006913 430 HLGNFLEKRRSLQLKKKAFDRSITE 454 (626)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (626)
-|.+|+||-|+|..+-+.|...|..
T Consensus 14 rlAsyidkVR~LE~~N~~Le~~i~~ 38 (39)
T 1gk7_A 14 RFANYIDKVRFLEQQNKILLAELEQ 38 (39)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4789999999999988887766643
No 316
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=37.72 E-value=3.1e+02 Score=27.07 Aligned_cols=176 Identities=2% Similarity=-0.038 Sum_probs=87.8
Q ss_pred CCcEEEEcC-CCCEEEEEeCCCCCCcccCeEEecCCeEEEEECCeEEEEECCCC-ccccceeEEEecCCCCCCCCCCeeE
Q 006913 55 EKTLFAFES-NGTIAWSLDLDFTCNIGTAPVHGGTGEVYIVAENRVLKVDLLKI-GTSESATQVFYGTGSGKGGTGAIAG 132 (626)
Q Consensus 55 dggL~a~d~-~G~~~W~~~~~~~~~i~~sp~iD~dG~IwVgT~ggL~~id~~~~-~~~~~~~~~~~~~~~~~~~~~~~I~ 132 (626)
++.+..+|. +++....+.... .+.++... ...+.++.++.+..+|..+. .... . ... ...
T Consensus 80 d~~v~iWd~~~~~~~~~~~~~~---~v~~v~~~-~~~~~~~~~~~i~i~d~~~~~~~~~---~----------~~~-~~~ 141 (355)
T 3vu4_A 80 KEVVHIWDDVKKQDVSRIKVDA---PVKDLFLS-REFIVVSYGDVISVFKFGNPWKRIT---D----------DIR-FGG 141 (355)
T ss_dssp TTEEEEEETTTTEEEEEEECSS---CEEEEEEC-SSEEEEEETTEEEEEESSTTCCBSS---C----------CEE-EEE
T ss_pred ccEEEEEECCCCcEEEEEECCC---ceEEEEEc-CCEEEEEEcCEEEEEECCCCceeeE---E----------ecc-CCc
Confidence 456778886 676654444321 23333443 34566667888999988764 2100 0 000 111
Q ss_pred EEEEEcCCeEEE--EEcCCeEEEEeCC-CcEEEEECCc---------ccccccccccccCCCCCccccceEEEcCCCe-E
Q 006913 133 IAVSTSSSSVYI--NVKGRALFAFMTH-GQLLWSAGPV---------LDQLGYRQGCTKTDVDCYFTSVPVIDQCEGS-I 199 (626)
Q Consensus 133 s~~~d~dG~LwI--gT~~gGL~a~d~~-G~~~w~~~~~---------~~~~~~~~~~~~~l~~~~i~sspviD~~dG~-L 199 (626)
...... +.+.+ |+.++.|..+|.. +......... ...+. .+ ... ..++...+ +|. |
T Consensus 142 ~~~~s~-~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~-----~h---~~~-v~~~~~s~-~g~~l 210 (355)
T 3vu4_A 142 VCEFSN-GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIK-----AH---TNP-IKMVRLNR-KSDMV 210 (355)
T ss_dssp EEEEET-TEEEEEESSCTTCEEEEECCC------------------CCEEEC-----CC---SSC-EEEEEECT-TSSEE
T ss_pred eEEEEc-cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEE-----cc---CCc-eEEEEECC-CCCEE
Confidence 111122 44444 3455667777764 3310000000 00000 00 011 23445554 444 5
Q ss_pred EEEcCCCe-EEEEeCCCCeEEEEEcCC-CCCcceeeeeecCCeEEEEEcCCCEEEEEECCCC
Q 006913 200 YISNTQGE-LYSLSAHSPYFNWIQDLS-SFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSG 259 (626)
Q Consensus 200 wIGT~~Gg-L~~ld~~tg~~~w~~~~~-s~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~tG 259 (626)
..|+.++. |..+|.++++.......+ ....+.++....+|.+.+....++.+...|..++
T Consensus 211 ~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 211 ATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp EEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCC
T ss_pred EEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCC
Confidence 66777876 999999988776544322 2234667777777765544434567777776554
No 317
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=36.63 E-value=1.3e+02 Score=32.45 Aligned_cols=58 Identities=9% Similarity=0.163 Sum_probs=42.5
Q ss_pred ecCCeEEEEEcCCCEEEEEECCCCcEEEEEecCCCCCceeeEEEeeCCeEEEEE---cCCeEEEEcCCCCEEEEe
Q 006913 236 GNNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPVVDSNGWISVGS---LDGLLYSFSPSGVLNKFS 307 (626)
Q Consensus 236 D~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~~~sspvvD~dG~IWVGT---~~gGLy~~d~~g~~~~~~ 307 (626)
+..|-+|+-| ..|.++.+|..||..+..-.+. ...|++++ ..+|+++++.+|++....
T Consensus 268 ~kygviyviT-K~G~i~lyDleTgt~i~~nrIs-------------~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~ 328 (494)
T 1bpo_A 268 EKHDVVFLIT-KYGYIHLYDLETGTCIYMNRIS-------------GETIFVTAPHEATAGIIGVNRKGQVLSVC 328 (494)
T ss_dssp TTTTEEEEEE-TTSEEEEEETTTCCEEEEEECC-------------SSCEEEEEEETTTTEEEEEETTCEEEEEE
T ss_pred ccCCEEEEEe-cCceEEEEecccceeeeeeccc-------------CCceEEecccCCCCcEEEEccCceEEEEE
Confidence 4688999999 4689999999999988654333 23444443 357999999888877643
No 318
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=36.35 E-value=3.1e+02 Score=26.64 Aligned_cols=229 Identities=9% Similarity=0.004 Sum_probs=105.1
Q ss_pred EEEEEe-CCcEEEEcC-CCC--EEEEEeCCCCCCcccCeEEecCCeEEE-EE-CCeEEEEECCCCccc--cceeEEEecC
Q 006913 49 KIYACS-EKTLFAFES-NGT--IAWSLDLDFTCNIGTAPVHGGTGEVYI-VA-ENRVLKVDLLKIGTS--ESATQVFYGT 120 (626)
Q Consensus 49 ~IwIgS-dggL~a~d~-~G~--~~W~~~~~~~~~i~~sp~iD~dG~IwV-gT-~ggL~~id~~~~~~~--~~~~~~~~~~ 120 (626)
.|..|+ ++.+..++. .+. ....+........+.++....+|++.+ ++ ++.|...+....... .......+.
T Consensus 26 ~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~- 104 (330)
T 2hes_X 26 ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIE- 104 (330)
T ss_dssp EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC-
T ss_pred EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEc-
Confidence 454555 566777776 432 222221110112344555666777555 44 677888876432100 000011111
Q ss_pred CCCCCCCCCeeEEEEEEcCCe-EEEEEcCCeEEEEeC-C-Cc---EEEEECCcccccccccccccCCCCCccccceEEEc
Q 006913 121 GSGKGGTGAIAGIAVSTSSSS-VYINVKGRALFAFMT-H-GQ---LLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQ 194 (626)
Q Consensus 121 ~~~~~~~~~~I~s~~~d~dG~-LwIgT~~gGL~a~d~-~-G~---~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~ 194 (626)
.. ...|..+....+|+ |..++.++.+..+|. . +. .+.... + +. ..+ .++...+
T Consensus 105 ----~h-~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~------~------h~---~~v-~~v~~~p 163 (330)
T 2hes_X 105 ----GH-ENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQ------E------HS---QDV-KHVIWHP 163 (330)
T ss_dssp ---------CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEEC------C------CS---SCE-EEEEECS
T ss_pred ----CC-CCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEec------c------CC---Cce-EEEEECC
Confidence 11 12334444444554 556677778888886 3 22 111110 0 00 111 2333443
Q ss_pred CCCeEEEEcCCCeEEEEeCCCCeEEEEEcCCC-CCcceeeeeecC--C-eEEEEEcCCCEEEEEECCCC----cEEEEE-
Q 006913 195 CEGSIYISNTQGELYSLSAHSPYFNWIQDLSS-FDKAFTLTPGNN--G-YLYVTIPVRALVLALDTSSG----NILWHK- 265 (626)
Q Consensus 195 ~dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s-~~~v~sI~~D~d--G-~LwVGT~~gG~l~alD~~tG----~~~w~~- 265 (626)
.+..|..|+.++.|..+|..++...-...... ...+.++....+ + .|..|+. ++.+...|..++ ...|..
T Consensus 164 ~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~-D~~v~iw~~~~~~~~~~~~~~~~ 242 (330)
T 2hes_X 164 SEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSD-DSTVRVWKYMGDDEDDQQEWVCE 242 (330)
T ss_dssp SSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEET-TSCEEEEEEEEECTTSCEEEEEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeC-CCeEEEEEecCCCccccceeEEe
Confidence 24456667778888888776553221111111 223445544444 4 3555553 345544443222 122221
Q ss_pred -ecCC-CCCceeeEEEeeCCeEEEEEcCCeEEEEcCC
Q 006913 266 -SVGP-LGSAEYAPVVDSNGWISVGSLDGLLYSFSPS 300 (626)
Q Consensus 266 -~~~~-l~~~~sspvvD~dG~IWVGT~~gGLy~~d~~ 300 (626)
.... ....+.++....++.|..|+.++.|..++..
T Consensus 243 ~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~ 279 (330)
T 2hes_X 243 AILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEEV 279 (330)
T ss_dssp EECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEEE
T ss_pred eecccccccceEEEEEcCCCEEEEEeCCCEEEEEEcC
Confidence 1111 1122444555567788888888888888864
No 319
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=35.99 E-value=3.2e+02 Score=26.67 Aligned_cols=68 Identities=13% Similarity=0.072 Sum_probs=37.5
Q ss_pred eEEEcCCCe-EEEEcCC-----CeEEEEeCCCCeEEEEEcCCCCCcceeeeeec-CCeEEEEEc----------------
Q 006913 190 PVIDQCEGS-IYISNTQ-----GELYSLSAHSPYFNWIQDLSSFDKAFTLTPGN-NGYLYVTIP---------------- 246 (626)
Q Consensus 190 pviD~~dG~-LwIGT~~-----GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~-dG~LwVGT~---------------- 246 (626)
+...+ +|. |++.... +.|+.+|..+++......... .. +.... ||++++...
T Consensus 243 ~~~sp-dg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~---~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~ 317 (396)
T 3c5m_A 243 EFWIP-DGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPP---CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIE 317 (396)
T ss_dssp EEECT-TSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCS---EE-EEEECSSSSEEEEEECCC----------CCC
T ss_pred eEECC-CCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCC---CC-CCccCCCCceEEEecCCcceeeccccccccC
Confidence 44544 443 5554332 349999998887654433222 11 33344 676555421
Q ss_pred CCCEEEEEECCCCcEE
Q 006913 247 VRALVLALDTSSGNIL 262 (626)
Q Consensus 247 ~gG~l~alD~~tG~~~ 262 (626)
....++.+|..++...
T Consensus 318 ~~~~i~~~d~~~~~~~ 333 (396)
T 3c5m_A 318 NDPFLYVLNTKAKSAQ 333 (396)
T ss_dssp CCCEEEEEETTTTBCC
T ss_pred CCCcEEEEecccCceE
Confidence 2357888888777653
No 320
>2oqq_A Transcription factor HY5; homodimer leucine zipper; 2.00A {Arabidopsis thaliana}
Probab=35.82 E-value=32 Score=24.31 Aligned_cols=32 Identities=19% Similarity=0.369 Sum_probs=22.8
Q ss_pred hhhhhhhhhhhhhHHHHHHHhhhhhhhHhhhh
Q 006913 440 SLQLKKKAFDRSITELEKKVAEDAVANEVIKK 471 (626)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (626)
.|..|.|.+..+..|||.+..-=.-.|..++|
T Consensus 7 eLE~r~k~le~~naeLEervstLq~EN~mLRq 38 (42)
T 2oqq_A 7 ELENRVKDLENKNSELEERLSTLQNENQMLRH 38 (42)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 56778888888899999887744444555554
No 321
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=35.65 E-value=3.8e+02 Score=28.79 Aligned_cols=108 Identities=11% Similarity=0.076 Sum_probs=62.8
Q ss_pred CCeEEEEcC-CCeEEEEeCCCC----eEEEEEc---CC---CCCcceeeeeecCCeEEEEEcCC------CEEEEEECCC
Q 006913 196 EGSIYISNT-QGELYSLSAHSP----YFNWIQD---LS---SFDKAFTLTPGNNGYLYVTIPVR------ALVLALDTSS 258 (626)
Q Consensus 196 dG~LwIGT~-~GgL~~ld~~tg----~~~w~~~---~~---s~~~v~sI~~D~dG~LwVGT~~g------G~l~alD~~t 258 (626)
...||++.. .+.|+.+|..+. ++.-... .. +.....++....+| |||...++ +.+..+|..|
T Consensus 95 r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T 173 (462)
T 2ece_A 95 RRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYS 173 (462)
T ss_dssp SCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTT
T ss_pred CCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCC
Confidence 567888654 567999998654 3332221 00 11123345556788 99976533 5899999999
Q ss_pred CcEEEEEecCCCC-CceeeEEEeeCCeEEEEEc--------------------CCeEEEEcCC-CCEE
Q 006913 259 GNILWHKSVGPLG-SAEYAPVVDSNGWISVGSL--------------------DGLLYSFSPS-GVLN 304 (626)
Q Consensus 259 G~~~w~~~~~~l~-~~~sspvvD~dG~IWVGT~--------------------~gGLy~~d~~-g~~~ 304 (626)
++++-....+... .+...+....++++.+.+. ++.|+.+|.. ++..
T Consensus 174 ~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~ 241 (462)
T 2ece_A 174 FEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRI 241 (462)
T ss_dssp CCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEE
T ss_pred CeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEe
Confidence 9987554433111 1122234455666555553 6789999875 4433
No 322
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=34.05 E-value=3.2e+02 Score=26.13 Aligned_cols=221 Identities=13% Similarity=0.123 Sum_probs=106.2
Q ss_pred CCEEEEE-e-C----CcEEEEcCCCCEEEEEeCCCCCCc-ccCeEEecCCeEEEEE--C-----CeEEEEECCCCccccc
Q 006913 47 DGKIYAC-S-E----KTLFAFESNGTIAWSLDLDFTCNI-GTAPVHGGTGEVYIVA--E-----NRVLKVDLLKIGTSES 112 (626)
Q Consensus 47 dG~IwIg-S-d----ggL~a~d~~G~~~W~~~~~~~~~i-~~sp~iD~dG~IwVgT--~-----ggL~~id~~~~~~~~~ 112 (626)
++.||+. . + +.+++||.... .|.......... ..+.+. -++.||+.. + +.++++|+.+.
T Consensus 15 ~~~i~v~GG~~~~~~~~~~~~d~~~~-~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~----- 87 (302)
T 2xn4_A 15 PKLMVVVGGQAPKAIRSVECYDFKEE-RWHQVAELPSRRCRAGMVY-MAGLVFAVGGFNGSLRVRTVDSYDPVKD----- 87 (302)
T ss_dssp CEEEEEECCBSSSBCCCEEEEETTTT-EEEEECCCSSCCBSCEEEE-ETTEEEEESCBCSSSBCCCEEEEETTTT-----
T ss_pred CCEEEEECCCCCCCCCcEEEEcCcCC-cEeEcccCCcccccceEEE-ECCEEEEEeCcCCCccccceEEECCCCC-----
Confidence 4566663 2 1 35889998333 475532211111 222333 367888853 1 35899999875
Q ss_pred eeEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEE-cC-----CeEEEEeCCCcEEEEECCcccccccccccccCCCCCcc
Q 006913 113 ATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINV-KG-----RALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYF 186 (626)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT-~~-----gGL~a~d~~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i 186 (626)
.|....... . . .........++.||+.. .+ +.+..||+... .|..-. .++ ....
T Consensus 88 --~W~~~~~~p-~--~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~-~W~~~~---~~p------~~r~---- 147 (302)
T 2xn4_A 88 --QWTSVANMR-D--R-RSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSN-EWFHVA---PMN------TRRS---- 147 (302)
T ss_dssp --EEEEECCCS-S--C-CBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTT-EEEEEC---CCS------SCCB----
T ss_pred --ceeeCCCCC-c--c-ccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCC-eEeecC---CCC------Cccc----
Confidence 443222111 0 1 11111222467888742 21 24778887633 476311 111 0000
Q ss_pred ccceEEEcCCCeEEEEcC--------CCeEEEEeCCCCeEEEEEcC--CCCCcceeeeeecCCeEEEEEcC-----CCEE
Q 006913 187 TSVPVIDQCEGSIYISNT--------QGELYSLSAHSPYFNWIQDL--SSFDKAFTLTPGNNGYLYVTIPV-----RALV 251 (626)
Q Consensus 187 ~sspviD~~dG~LwIGT~--------~GgL~~ld~~tg~~~w~~~~--~s~~~v~sI~~D~dG~LwVGT~~-----gG~l 251 (626)
..+.+.. ++.||+-.. ...+++||+.+++ |..-. +......+++. .++.||+..-. ...+
T Consensus 148 ~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~ 222 (302)
T 2xn4_A 148 SVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNE--WTYIAEMSTRRSGAGVGV-LNNLLYAVGGHDGPLVRKSV 222 (302)
T ss_dssp SCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTE--EEEECCCSSCCBSCEEEE-ETTEEEEECCBSSSSBCCCE
T ss_pred CceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCc--EEECCCCccccccccEEE-ECCEEEEECCCCCCcccceE
Confidence 1112333 678887431 2348899998764 65421 11111122222 36788886411 1257
Q ss_pred EEEECCCCcEEEEEecC-CCCCceeeEEEeeCCeEEEEE-cC-----CeEEEEcCCCC
Q 006913 252 LALDTSSGNILWHKSVG-PLGSAEYAPVVDSNGWISVGS-LD-----GLLYSFSPSGV 302 (626)
Q Consensus 252 ~alD~~tG~~~w~~~~~-~l~~~~sspvvD~dG~IWVGT-~~-----gGLy~~d~~g~ 302 (626)
+.+|+.++ .|..... +......+.+.. ++.||+-. .+ ..+++||+...
T Consensus 223 ~~yd~~~~--~W~~~~~~~~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 223 EVYDPTTN--AWRQVADMNMCRRNAGVCAV-NGLLYVVGGDDGSCNLASVEYYNPTTD 277 (302)
T ss_dssp EEEETTTT--EEEEECCCSSCCBSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred EEEeCCCC--CEeeCCCCCCccccCeEEEE-CCEEEEECCcCCCcccccEEEEcCCCC
Confidence 88998776 4654222 111122223333 67888743 22 23777777543
No 323
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=32.03 E-value=3.3e+02 Score=30.25 Aligned_cols=93 Identities=12% Similarity=0.193 Sum_probs=57.9
Q ss_pred CCeEEEEcC-CCeEEEEeCCCCeEEEEEcCCCCCcceeeee---ecCCeEEEEE-----------------cCCCEEEEE
Q 006913 196 EGSIYISNT-QGELYSLSAHSPYFNWIQDLSSFDKAFTLTP---GNNGYLYVTI-----------------PVRALVLAL 254 (626)
Q Consensus 196 dG~LwIGT~-~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~---D~dG~LwVGT-----------------~~gG~l~al 254 (626)
+..+||... ++.|.++|.++.+.......+.......++. -+.+.+|+++ ...+.+.++
T Consensus 101 G~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvI 180 (595)
T 1fwx_A 101 GRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAV 180 (595)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEE
T ss_pred CCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEE
Confidence 466898765 4569999999988766444332122333343 2355788885 123478889
Q ss_pred ECCCCcEEEEEecCCCCCceeeEEEeeC-CeEEEEEcC
Q 006913 255 DTSSGNILWHKSVGPLGSAEYAPVVDSN-GWISVGSLD 291 (626)
Q Consensus 255 D~~tG~~~w~~~~~~l~~~~sspvvD~d-G~IWVGT~~ 291 (626)
|..+.++.|+...+. + ...+.++.+ +++|+.+++
T Consensus 181 D~~t~~v~~qI~Vgg--~-pd~~~~spdGk~~~vt~~~ 215 (595)
T 1fwx_A 181 DADKWEVAWQVLVSG--N-LDNCDADYEGKWAFSTSYN 215 (595)
T ss_dssp ETTTTEEEEEEEESS--C-CCCEEECSSSSEEEEEESC
T ss_pred ECCCCeEEEEEEeCC--C-ccceEECCCCCEEEEEecC
Confidence 999999999987652 1 112334434 567777755
No 324
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=30.42 E-value=2.1e+02 Score=31.22 Aligned_cols=108 Identities=6% Similarity=-0.053 Sum_probs=59.3
Q ss_pred CCeEEEEcCCCeEEEEeCCCCeEEEEEcCCCC--CcceeeeeecCCe-EEEEEcC--------CCEEEEEECCCCcEEEE
Q 006913 196 EGSIYISNTQGELYSLSAHSPYFNWIQDLSSF--DKAFTLTPGNNGY-LYVTIPV--------RALVLALDTSSGNILWH 264 (626)
Q Consensus 196 dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s~--~~v~sI~~D~dG~-LwVGT~~--------gG~l~alD~~tG~~~w~ 264 (626)
+|.++..+.+|.|+.+|..+++.......... ..+..+....||+ |..+... .+.++.+|..+|+....
T Consensus 27 dg~~~~~~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l 106 (723)
T 1xfd_A 27 DTEFIYREQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSL 106 (723)
T ss_dssp SSCBCCCCSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEEC
T ss_pred CCcEEEEeCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEec
Confidence 45544444567788888888876544332111 1245666677886 4444421 15677888888765211
Q ss_pred EecCCCCCceeeEEEeeCC-eEEEEEcCCeEEEEcCC-CCEE
Q 006913 265 KSVGPLGSAEYAPVVDSNG-WISVGSLDGLLYSFSPS-GVLN 304 (626)
Q Consensus 265 ~~~~~l~~~~sspvvD~dG-~IWVGT~~gGLy~~d~~-g~~~ 304 (626)
............+...+|| .|..++ ++.|+.++.. ++..
T Consensus 107 ~~~~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~g~~~ 147 (723)
T 1xfd_A 107 DPPEVSNAKLQYAGWGPKGQQLIFIF-ENNIYYCAHVGKQAI 147 (723)
T ss_dssp CCTTCCSCCCSBCCBCSSTTCEEEEE-TTEEEEESSSSSCCE
T ss_pred cCCccccccccccEECCCCCEEEEEE-CCeEEEEECCCCceE
Confidence 1111101113345566677 455555 4789999875 4443
No 325
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=26.85 E-value=4.3e+02 Score=25.38 Aligned_cols=182 Identities=14% Similarity=0.141 Sum_probs=90.7
Q ss_pred eCCEEEEEe-C----------CcEEEEcCCCCEEEEEeCCCCCCc-ccCeEEecCCeEEEEE-------CCeEEEEECCC
Q 006913 46 EDGKIYACS-E----------KTLFAFESNGTIAWSLDLDFTCNI-GTAPVHGGTGEVYIVA-------ENRVLKVDLLK 106 (626)
Q Consensus 46 ~dG~IwIgS-d----------ggL~a~d~~G~~~W~~~~~~~~~i-~~sp~iD~dG~IwVgT-------~ggL~~id~~~ 106 (626)
.++.||+.. . +.+++||.... .|.......... ..+.+. -++.||+.. .+.++++|+.+
T Consensus 69 ~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~-~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~ 146 (308)
T 1zgk_A 69 VGGLLYAVGGRNNSPDGNTDSSALDCYNPMTN-QWSPCAPMSVPRNRIGVGV-IDGHIYAVGGSHGCIHHNSVERYEPER 146 (308)
T ss_dssp ETTEEEEECCEEEETTEEEECCCEEEEETTTT-EEEECCCCSSCCBTCEEEE-ETTEEEEECCEETTEECCCEEEEETTT
T ss_pred ECCEEEEECCCcCCCCCCeecceEEEECCCCC-eEeECCCCCcCccccEEEE-ECCEEEEEcCCCCCcccccEEEECCCC
Confidence 578888842 1 25889997322 465432211111 122222 367888852 14688999987
Q ss_pred CccccceeEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEc------CCeEEEEeCCCcEEEEECCcccccccccccccC
Q 006913 107 IGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVK------GRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKT 180 (626)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~------~gGL~a~d~~G~~~w~~~~~~~~~~~~~~~~~~ 180 (626)
. .|...... +. . .........++.||+-.- .+.+.+||+... .|..-. .++ ..
T Consensus 147 ~-------~W~~~~~~-p~--~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~-~W~~~~---~~p------~~ 205 (308)
T 1zgk_A 147 D-------EWHLVAPM-LT--R-RIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERN-EWRMIT---AMN------TI 205 (308)
T ss_dssp T-------EEEECCCC-SS--C-CBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTT-EEEECC---CCS------SC
T ss_pred C-------eEeECCCC-Cc--c-ccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCC-eEeeCC---CCC------Cc
Confidence 5 45432211 11 1 111112223788887521 245889998643 476411 111 00
Q ss_pred CCCCccccceEEEcCCCeEEEEc-C-----CCeEEEEeCCCCeEEEEEcCC--CCCcceeeeeecCCeEEEEEcC-----
Q 006913 181 DVDCYFTSVPVIDQCEGSIYISN-T-----QGELYSLSAHSPYFNWIQDLS--SFDKAFTLTPGNNGYLYVTIPV----- 247 (626)
Q Consensus 181 l~~~~i~sspviD~~dG~LwIGT-~-----~GgL~~ld~~tg~~~w~~~~~--s~~~v~sI~~D~dG~LwVGT~~----- 247 (626)
. . ..+.++. ++.||+-. . ...+++||+.++ .|..-.. ......+++. .++.|||..-.
T Consensus 206 r---~-~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~--~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~ 276 (308)
T 1zgk_A 206 R---S-GAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETE--TWTFVAPMKHRRSALGITV-HQGRIYVLGGYDGHTF 276 (308)
T ss_dssp C---B-SCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTT--EEEECCCCSSCCBSCEEEE-ETTEEEEECCBCSSCB
T ss_pred c---c-cceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCC--cEEECCCCCCCccceEEEE-ECCEEEEEcCcCCCcc
Confidence 0 0 1122333 67888643 2 135899999875 4764322 1111122222 36788876311
Q ss_pred CCEEEEEECCCC
Q 006913 248 RALVLALDTSSG 259 (626)
Q Consensus 248 gG~l~alD~~tG 259 (626)
...++.+|+.++
T Consensus 277 ~~~v~~yd~~~~ 288 (308)
T 1zgk_A 277 LDSVECYDPDTD 288 (308)
T ss_dssp CCEEEEEETTTT
T ss_pred cceEEEEcCCCC
Confidence 135677887665
No 326
>3f6k_A Sortilin; protein sorting receptor, 10-bladed beta-propeller, Cys-rich ssortilin, sortilin VPS10P-D, protein-peptide complex, DEVE protein; HET: NAG BMA PGE; 2.00A {Homo sapiens}
Probab=26.77 E-value=7.2e+02 Score=27.95 Aligned_cols=140 Identities=13% Similarity=0.103 Sum_probs=60.4
Q ss_pred eeEEEEEEcCCeEEEEEcCCeEEEEeCCCcEEEEECCcccccccccccccCCCCCccccceEEEcC-CCeEEEEcC----
Q 006913 130 IAGIAVSTSSSSVYINVKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQC-EGSIYISNT---- 204 (626)
Q Consensus 130 ~I~s~~~d~dG~LwIgT~~gGL~a~d~~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~-dG~LwIGT~---- 204 (626)
+|-....+.+..+++++..+||++-+-.|+ .|..-. ..++ .... .. ..++++++. .+.||++..
T Consensus 46 vI~vlt~~~~~~~~~~t~~ggvyrS~DgG~-TW~~v~--~~~~------~~~~-~~-~~~IavdP~dp~~vyvag~~~~~ 114 (685)
T 3f6k_A 46 VILVLTTFHVPLVIMTFGQSKLYRSEDYGK-NFKDIT--DLIN------NTFI-RT-EFGMAIGPENSGKVVLTAEVSGG 114 (685)
T ss_dssp CEEEEEEECCCC-----CEEEEEEESSTTS-SCEECG--GGGT------TCCB-CG-GGCEEECSTTCCCEEEEECCCTT
T ss_pred EEEEEccCCCCceEEeecCCeEEEEeCCCC-CceECc--CCCC------CCcc-cc-eeEEEECCCCCCEEEEEEeccCC
Confidence 444444455566677777788877665465 476311 0000 0000 00 134666642 346777654
Q ss_pred --CCeEEEEeCCCCeEEEEEcCCCCCcceeeeee--cCCeEEEEEcCCCEEEEEECCCCcEEEEEecCCCCCceeeEEEe
Q 006913 205 --QGELYSLSAHSPYFNWIQDLSSFDKAFTLTPG--NNGYLYVTIPVRALVLALDTSSGNILWHKSVGPLGSAEYAPVVD 280 (626)
Q Consensus 205 --~GgL~~ld~~tg~~~w~~~~~s~~~v~sI~~D--~dG~LwVGT~~gG~l~alD~~tG~~~w~~~~~~l~~~~sspvvD 280 (626)
.++|++ ..++|+ .|............++.+ ..+.||++.. .++++.- .+|-..|+..... ......+
T Consensus 115 ~~~g~v~r-S~DgG~-TW~~~~~p~~~~~~l~~~P~~~~~l~a~~~-~~gly~S--~DgG~TW~~i~~~----v~~~~f~ 185 (685)
T 3f6k_A 115 SRGGRIFR-SSDFAK-NFVQTDLPFHPLTQMMYSPQNSDYLLALST-ENGLWVS--KNFGGKWEEIHKA----VCLAKWG 185 (685)
T ss_dssp CSSCEEEE-ESSTTS-SCEEEECSSCBSSCCEEETTEEEEEEEEBT-TCCEEEE--SSTTSSEEEEESS----EEEEEEC
T ss_pred CCCceEEE-ECCCCc-eeEeccCCCCCceEEEEecCCCCEEEEEEC-CCCEEEE--eCCCCCcEEeecC----ccccccC
Confidence 566665 455553 354321111111123333 3346776653 3455543 2344566643321 1122334
Q ss_pred eCCeEEEEE
Q 006913 281 SNGWISVGS 289 (626)
Q Consensus 281 ~dG~IWVGT 289 (626)
..+.||+..
T Consensus 186 ~~~~Iy~~~ 194 (685)
T 3f6k_A 186 SDNTIFFTT 194 (685)
T ss_dssp STTCEEEEE
T ss_pred CCCeEEEEe
Confidence 456677665
No 327
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=25.81 E-value=2.2e+02 Score=31.68 Aligned_cols=32 Identities=16% Similarity=0.259 Sum_probs=24.8
Q ss_pred eEEEeeCCeEEEEEcCC-------------eEEEEcCC-CCEEEEe
Q 006913 276 APVVDSNGWISVGSLDG-------------LLYSFSPS-GVLNKFS 307 (626)
Q Consensus 276 spvvD~dG~IWVGT~~g-------------GLy~~d~~-g~~~~~~ 307 (626)
.+++|++|.|||+|+.+ .||++++. |++..+.
T Consensus 480 nL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl 525 (592)
T 4a9v_A 480 GLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFM 525 (592)
T ss_dssp EEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEE
T ss_pred ceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEE
Confidence 46789999999988642 79999984 7766554
No 328
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=25.47 E-value=4.4e+02 Score=28.67 Aligned_cols=108 Identities=12% Similarity=0.057 Sum_probs=54.5
Q ss_pred cCCeEEEEEcCCeEEEEeCC-CcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcC---------CCe
Q 006913 138 SSSSVYINVKGRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNT---------QGE 207 (626)
Q Consensus 138 ~dG~LwIgT~~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~---------~Gg 207 (626)
.+|.++..+.++.|+.+|.. |+..-.... .. ... .. ..++...+.+..|..+.. ++.
T Consensus 25 ~dg~~~~~~~d~~i~~~~~~~g~~~~~~~~-------~~--~~~---~~-~~~~~~SpDg~~la~~~~~~~~~~~s~~~~ 91 (719)
T 1z68_A 25 SGQEYLHQSADNNIVLYNIETGQSYTILSN-------RT--MKS---VN-ASNYGLSPDRQFVYLESDYSKLWRYSYTAT 91 (719)
T ss_dssp SSSEEEEECTTSCEEEEESSSCCEEEEECH-------HH--HHT---TT-CSEEEECTTSSEEEEEEEEEECSSSCEEEE
T ss_pred CCCeEEEEcCCCCEEEEEcCCCcEEEEEcc-------cc--ccc---cc-eeeEEECCCCCeEEEEecCceeEEeecceE
Confidence 45565555566778888875 654332210 00 000 00 123445441334555543 467
Q ss_pred EEEEeCCCCeEEEEEcCCCCCcceeeeeecCCe-EEEEEcCCCEEEEEECCCCcEE
Q 006913 208 LYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGY-LYVTIPVRALVLALDTSSGNIL 262 (626)
Q Consensus 208 L~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG~-LwVGT~~gG~l~alD~~tG~~~ 262 (626)
|+.+|.++++........ ..+..+....||+ |..+. .+.++..+..+|...
T Consensus 92 i~~~d~~~g~~~~~~~l~--~~~~~~~~SPDG~~la~~~--~~~i~~~~~~~g~~~ 143 (719)
T 1z68_A 92 YYIYDLSNGEFVRGNELP--RPIQYLCWSPVGSKLAYVY--QNNIYLKQRPGDPPF 143 (719)
T ss_dssp EEEEETTTTEECCSSCCC--SSBCCEEECSSTTCEEEEE--TTEEEEESSTTSCCE
T ss_pred EEEEECCCCccccceecC--cccccceECCCCCEEEEEE--CCeEEEEeCCCCCcE
Confidence 899999888652101111 1233444555664 44333 357887887777654
No 329
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=25.38 E-value=4.7e+02 Score=25.28 Aligned_cols=196 Identities=9% Similarity=0.030 Sum_probs=88.4
Q ss_pred ccCeEEecCCeEEEE-E-CCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEcCC-eEEEEEcCCeEEEEeC
Q 006913 80 GTAPVHGGTGEVYIV-A-ENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSS-SVYINVKGRALFAFMT 156 (626)
Q Consensus 80 ~~sp~iD~dG~IwVg-T-~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG-~LwIgT~~gGL~a~d~ 156 (626)
+.++....+|++.+. + ++.|...|........ .....+. ... ..+..+....++ .|..++.++.+..++.
T Consensus 110 V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~-~~~~~~~-----~h~-~~v~~v~~~p~~~~l~s~s~D~~i~iW~~ 182 (330)
T 2hes_X 110 VKGVAWSNDGYYLATCSRDKSVWIWETDESGEEY-ECISVLQ-----EHS-QDVKHVIWHPSEALLASSSYDDTVRIWKD 182 (330)
T ss_dssp EEEEEECTTSCEEEEEETTSCEEEEECCTTCCCC-EEEEEEC-----CCS-SCEEEEEECSSSSEEEEEETTSCEEEEEE
T ss_pred EEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCe-EEEEEec-----cCC-CceEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 345556667775554 4 7788888874321000 0011111 111 233333333344 4556677777777775
Q ss_pred C-Cc--EEEEECCcccccccccccccCCCCCccccceEEEcC-CC-eEEEEcCCCeEEEEeCCCC----eEEEEE--cCC
Q 006913 157 H-GQ--LLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQC-EG-SIYISNTQGELYSLSAHSP----YFNWIQ--DLS 225 (626)
Q Consensus 157 ~-G~--~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~-dG-~LwIGT~~GgL~~ld~~tg----~~~w~~--~~~ 225 (626)
. +. .+..+. + + ...+ .+....+. ++ .|..|..++.|..+|.+++ ...|.. ...
T Consensus 183 ~~~~~~~~~~~~------~------h---~~~v-~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~ 246 (330)
T 2hes_X 183 YDDDWECVAVLN------G------H---EGTV-WSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILP 246 (330)
T ss_dssp ETTEEEEEEEEC------C------C---SSCE-EEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECC
T ss_pred CCCCeeEEEEcc------C------C---CCcE-EEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecc
Confidence 3 32 222210 0 0 0111 22333321 13 3666777777777776442 222321 111
Q ss_pred --CCCcceeeeeecCCeEEEEEcCCCEEEEEECCCCcEE-EEEecCCCCC-ceeeEEEee--CC-eEEEEEcCCeEEEEc
Q 006913 226 --SFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNIL-WHKSVGPLGS-AEYAPVVDS--NG-WISVGSLDGLLYSFS 298 (626)
Q Consensus 226 --s~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~tG~~~-w~~~~~~l~~-~~sspvvD~--dG-~IWVGT~~gGLy~~d 298 (626)
....+.++....++.|..+.. ++.+..+|..++... .......... .+..+...+ ++ .|..|+.++.|..++
T Consensus 247 ~~h~~~v~~v~~s~~~~l~s~~~-dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~ 325 (330)
T 2hes_X 247 DVHKRQVYNVAWGFNGLIASVGA-DGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWS 325 (330)
T ss_dssp SCCSSCEEEEEECTTSCEEEEET-TSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEE
T ss_pred cccccceEEEEEcCCCEEEEEeC-CCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEE
Confidence 123455666655666777664 456666776566421 1111111011 233333333 33 455667777666665
Q ss_pred C
Q 006913 299 P 299 (626)
Q Consensus 299 ~ 299 (626)
.
T Consensus 326 ~ 326 (330)
T 2hes_X 326 L 326 (330)
T ss_dssp C
T ss_pred e
Confidence 3
No 330
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=24.78 E-value=7.4 Score=28.11 Aligned_cols=11 Identities=18% Similarity=0.607 Sum_probs=7.7
Q ss_pred EEeeccccccc
Q 006913 418 CIFWRKKKLQG 428 (626)
Q Consensus 418 ~~~~~~~~~~~ 428 (626)
++|||+||.|+
T Consensus 31 ~~~~RRRr~~~ 41 (44)
T 2l2t_A 31 AVYVRRKSIKK 41 (44)
T ss_dssp HHHHHTTCSSC
T ss_pred HHHhhhhhhhh
Confidence 46778777765
No 331
>3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy, decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo sapiens} PDB: 3lb6_D*
Probab=24.57 E-value=16 Score=38.09 Aligned_cols=32 Identities=19% Similarity=0.282 Sum_probs=0.0
Q ss_pred eeeehhhHHHHHHHHhheeeEEEeeccccccccc
Q 006913 397 LLFLFFESVVLLVLAVLVRFCCIFWRKKKLQGQH 430 (626)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (626)
+.+|++..++++++ ++..||++|.|+|+-.+-
T Consensus 341 ~~~~~i~~~~~~~~--~l~~~~~~~~k~~~~~~~ 372 (380)
T 3lb6_C 341 LLRFWLPFGFILIL--VIFVTGLLLRKPNTYPKM 372 (380)
T ss_dssp ----------------------------------
T ss_pred cEEEEhHHHHHHHH--HHHHHHHHHhcchhHHHH
Confidence 55666665555433 344588888887754443
No 332
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=24.26 E-value=4.8e+02 Score=25.03 Aligned_cols=220 Identities=12% Similarity=0.082 Sum_probs=105.6
Q ss_pred eCCEEEEE-e-----CCcEEEEcCCCCEEEEEeCCCCCCc-ccCeEEecCCeEEEEEC-----------CeEEEEECCCC
Q 006913 46 EDGKIYAC-S-----EKTLFAFESNGTIAWSLDLDFTCNI-GTAPVHGGTGEVYIVAE-----------NRVLKVDLLKI 107 (626)
Q Consensus 46 ~dG~IwIg-S-----dggL~a~d~~G~~~W~~~~~~~~~i-~~sp~iD~dG~IwVgT~-----------ggL~~id~~~~ 107 (626)
.++.||+- . -+.+++||.... .|.......... ..+.+. -++.||+... +.++++|+.+.
T Consensus 23 ~~~~i~v~GG~~~~~~~~~~~~d~~~~-~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~ 100 (308)
T 1zgk_A 23 VGRLIYTAGGYFRQSLSYLEAYNPSNG-TWLRLADLQVPRSGLAGCV-VGGLLYAVGGRNNSPDGNTDSSALDCYNPMTN 100 (308)
T ss_dssp CCCCEEEECCBSSSBCCCEEEEETTTT-EEEECCCCSSCCBSCEEEE-ETTEEEEECCEEEETTEEEECCCEEEEETTTT
T ss_pred CCCEEEEEeCcCCCCcceEEEEcCCCC-eEeECCCCCcccccceEEE-ECCEEEEECCCcCCCCCCeecceEEEECCCCC
Confidence 35567663 2 136899998322 465432211111 222233 3678887521 35888998875
Q ss_pred ccccceeEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEc------CCeEEEEeCCCcEEEEECCcccccccccccccCC
Q 006913 108 GTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVK------GRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTD 181 (626)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~------~gGL~a~d~~G~~~w~~~~~~~~~~~~~~~~~~l 181 (626)
.|...... +. . .........++.||+..- ...+.+||+... .|.... .++ ...
T Consensus 101 -------~W~~~~~~-p~--~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~-~W~~~~---~~p------~~r 159 (308)
T 1zgk_A 101 -------QWSPCAPM-SV--P-RNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERD-EWHLVA---PML------TRR 159 (308)
T ss_dssp -------EEEECCCC-SS--C-CBTCEEEEETTEEEEECCEETTEECCCEEEEETTTT-EEEECC---CCS------SCC
T ss_pred -------eEeECCCC-Cc--C-ccccEEEEECCEEEEEcCCCCCcccccEEEECCCCC-eEeECC---CCC------ccc
Confidence 45432211 11 1 111112234778887521 245888998633 476411 111 000
Q ss_pred CCCccccceEEEcCCCeEEEEcC------CCeEEEEeCCCCeEEEEEcCC--CCCcceeeeeecCCeEEEEEcC-----C
Q 006913 182 VDCYFTSVPVIDQCEGSIYISNT------QGELYSLSAHSPYFNWIQDLS--SFDKAFTLTPGNNGYLYVTIPV-----R 248 (626)
Q Consensus 182 ~~~~i~sspviD~~dG~LwIGT~------~GgL~~ld~~tg~~~w~~~~~--s~~~v~sI~~D~dG~LwVGT~~-----g 248 (626)
. ..+.+.. ++.||+-.. ...+++||+.++ .|..-.. ......+.+. .++.|||..-. .
T Consensus 160 ~----~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~ 230 (308)
T 1zgk_A 160 I----GVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERN--EWRMITAMNTIRSGAGVCV-LHNCIYAAGGYDGQDQL 230 (308)
T ss_dssp B----SCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTT--EEEECCCCSSCCBSCEEEE-ETTEEEEECCBCSSSBC
T ss_pred c----ceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCC--eEeeCCCCCCccccceEEE-ECCEEEEEeCCCCCCcc
Confidence 0 1122333 678887432 234899999875 4764322 1111122223 37888886411 1
Q ss_pred CEEEEEECCCCcEEEEEecC-CCCCceeeEEEeeCCeEEEEE-c-----CCeEEEEcCC
Q 006913 249 ALVLALDTSSGNILWHKSVG-PLGSAEYAPVVDSNGWISVGS-L-----DGLLYSFSPS 300 (626)
Q Consensus 249 G~l~alD~~tG~~~w~~~~~-~l~~~~sspvvD~dG~IWVGT-~-----~gGLy~~d~~ 300 (626)
..++.+|+.++ .|..... +......+.++. ++.||+-. . ...+++||+.
T Consensus 231 ~~v~~yd~~~~--~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~ 286 (308)
T 1zgk_A 231 NSVERYDVETE--TWTFVAPMKHRRSALGITVH-QGRIYVLGGYDGHTFLDSVECYDPD 286 (308)
T ss_dssp CCEEEEETTTT--EEEECCCCSSCCBSCEEEEE-TTEEEEECCBCSSCBCCEEEEEETT
T ss_pred ceEEEEeCCCC--cEEECCCCCCCccceEEEEE-CCEEEEEcCcCCCcccceEEEEcCC
Confidence 35788998776 5654222 111122223333 67777743 1 1345666654
No 333
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=24.22 E-value=5.1e+02 Score=25.32 Aligned_cols=91 Identities=19% Similarity=0.295 Sum_probs=46.7
Q ss_pred cCCeEEEEE--cCCeEEEEeCC-CcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEc-C---------
Q 006913 138 SSSSVYINV--KGRALFAFMTH-GQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISN-T--------- 204 (626)
Q Consensus 138 ~dG~LwIgT--~~gGL~a~d~~-G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT-~--------- 204 (626)
.++.||+.. ..+.+++||+. ....|..-+ .++. ... . ..+.+.- ++.||+-. .
T Consensus 18 ~~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~---~~p~-----~~R--~--~~~~~~~--~~~lyv~GG~~~~~~~~~~ 83 (357)
T 2uvk_A 18 DNDTVYIGLGSAGTAWYKLDTQAKDKKWTALA---AFPG-----GPR--D--QATSAFI--DGNLYVFGGIGKNSEGLTQ 83 (357)
T ss_dssp ETTEEEEECGGGTTCEEEEETTSSSCCEEECC---CCTT-----CCC--B--SCEEEEE--TTEEEEECCEEECTTSCEE
T ss_pred ECCEEEEEeCcCCCeEEEEccccCCCCeeECC---CCCC-----CcC--c--cceEEEE--CCEEEEEcCCCCCCCccce
Confidence 378888852 23569999985 345687411 1110 000 0 1112333 67888632 2
Q ss_pred -CCeEEEEeCCCCeEEEEEcCC---CCCcceeeeeecCCeEEEEE
Q 006913 205 -QGELYSLSAHSPYFNWIQDLS---SFDKAFTLTPGNNGYLYVTI 245 (626)
Q Consensus 205 -~GgL~~ld~~tg~~~w~~~~~---s~~~v~sI~~D~dG~LwVGT 245 (626)
...+++||+.+++ |..-.. ....-.+.+. .++.|||-.
T Consensus 84 ~~~~v~~yd~~~~~--W~~~~~~~p~~r~~~~~~~-~~~~iyv~G 125 (357)
T 2uvk_A 84 VFNDVHKYNPKTNS--WVKLMSHAPMGMAGHVTFV-HNGKAYVTG 125 (357)
T ss_dssp ECCCEEEEETTTTE--EEECSCCCSSCCSSEEEEE-ETTEEEEEE
T ss_pred eeccEEEEeCCCCc--EEECCCCCCcccccceEEE-ECCEEEEEe
Confidence 1247889998754 764322 1111122233 578898864
No 334
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=24.08 E-value=7.6e+02 Score=27.27 Aligned_cols=150 Identities=11% Similarity=0.001 Sum_probs=81.3
Q ss_pred EcCCeEEEEEcCCeEEEEeCCCcEEEEECCcccccccccccccCCCCCccccceEEEcCCCeEEEEcCCCeEEEEeCCCC
Q 006913 137 TSSSSVYINVKGRALFAFMTHGQLLWSAGPVLDQLGYRQGCTKTDVDCYFTSVPVIDQCEGSIYISNTQGELYSLSAHSP 216 (626)
Q Consensus 137 d~dG~LwIgT~~gGL~a~d~~G~~~w~~~~~~~~~~~~~~~~~~l~~~~i~sspviD~~dG~LwIGT~~GgL~~ld~~tg 216 (626)
..+..|-+++.++.+..++.++ .+.. +. .. .......+ .+....+.+..|.+|+.+|.|..+|.+++
T Consensus 95 PdG~~LAs~s~dg~V~iwd~~~--~l~~------l~-~~---~~~~~~sv-~svafSPDG~~LAsgs~DGtVkIWd~~~~ 161 (588)
T 2j04_A 95 PIDDWMAVLSNNGNVSVFKDNK--MLTN------LD-SK---GNLSSRTY-HCFEWNPIESSIVVGNEDGELQFFSIRKN 161 (588)
T ss_dssp SSSSCEEEEETTSCEEEEETTE--EEEE------CC-CS---SCSTTTCE-EEEEECSSSSCEEEEETTSEEEEEECCCC
T ss_pred CCCCEEEEEeCCCcEEEEeCCc--eeee------cc-CC---CccccccE-EEEEEcCCCCEEEEEcCCCEEEEEECCCC
Confidence 3444466777778888888544 2221 00 00 00000011 23344333667899999999999999987
Q ss_pred eE-------EEEEc--CC-CCCcceeeeeecCCeEEEEEcCCCEEEEEECCCCcEE--EEE-ecCCCCCceeeEEEeeCC
Q 006913 217 YF-------NWIQD--LS-SFDKAFTLTPGNNGYLYVTIPVRALVLALDTSSGNIL--WHK-SVGPLGSAEYAPVVDSNG 283 (626)
Q Consensus 217 ~~-------~w~~~--~~-s~~~v~sI~~D~dG~LwVGT~~gG~l~alD~~tG~~~--w~~-~~~~l~~~~sspvvD~dG 283 (626)
.+ ..... .. ....+.+++-..|| +-++.. +..+...|..++... ++. .... ...+.++... ++
T Consensus 162 ~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~-D~tVrlWd~~~~~~~~~~~tL~~~h-~~~V~svaFs-g~ 237 (588)
T 2j04_A 162 SENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALS-NNSVFSMTVSASSHQPVSRMIQNAS-RRKITDLKIV-DY 237 (588)
T ss_dssp TTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEET-TCCEEEECCCSSSSCCCEEEEECCC-SSCCCCEEEE-TT
T ss_pred ccccccceeeeeeecccccccccEEEEEEcCCc-EEEEeC-CCeEEEEECCCCccccceeeecccc-cCcEEEEEEE-CC
Confidence 52 11111 11 12357777777788 666554 567777787666631 221 1111 1123334444 45
Q ss_pred eEEEEEcCCeEEEEcCCCCEE
Q 006913 284 WISVGSLDGLLYSFSPSGVLN 304 (626)
Q Consensus 284 ~IWVGT~~gGLy~~d~~g~~~ 304 (626)
.|-.+. ++.|..++..+...
T Consensus 238 ~LASa~-~~tIkLWd~~~~~~ 257 (588)
T 2j04_A 238 KVVLTC-PGYVHKIDLKNYSI 257 (588)
T ss_dssp EEEEEC-SSEEEEEETTTTEE
T ss_pred EEEEEe-CCeEEEEECCCCeE
Confidence 555554 68999999775544
No 335
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=23.98 E-value=1.6e+02 Score=32.32 Aligned_cols=104 Identities=9% Similarity=-0.006 Sum_probs=60.5
Q ss_pred CCeEEEEcCCCeEEEEeCCCCeEEEEEcCCCC--CcceeeeeecCCe-EEEEEcC--------CCEEEEEECCCCcEEEE
Q 006913 196 EGSIYISNTQGELYSLSAHSPYFNWIQDLSSF--DKAFTLTPGNNGY-LYVTIPV--------RALVLALDTSSGNILWH 264 (626)
Q Consensus 196 dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s~--~~v~sI~~D~dG~-LwVGT~~--------gG~l~alD~~tG~~~w~ 264 (626)
+|.++....++.|+.+|..+++.......... ..+.++....||+ |.++... .+.++.+|..+|+....
T Consensus 26 dg~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~ 105 (719)
T 1z68_A 26 GQEYLHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRG 105 (719)
T ss_dssp SSEEEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCS
T ss_pred CCeEEEEcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccc
Confidence 56666666678899999999876543321110 0144556666775 4444421 25788888888865211
Q ss_pred EecCCCCCceeeEEEeeCCe-EEEEEcCCeEEEEcCC-CCE
Q 006913 265 KSVGPLGSAEYAPVVDSNGW-ISVGSLDGLLYSFSPS-GVL 303 (626)
Q Consensus 265 ~~~~~l~~~~sspvvD~dG~-IWVGT~~gGLy~~d~~-g~~ 303 (626)
..+. .....+...+||. |..+ .++.|+.++.. ++.
T Consensus 106 ~~l~---~~~~~~~~SPDG~~la~~-~~~~i~~~~~~~g~~ 142 (719)
T 1z68_A 106 NELP---RPIQYLCWSPVGSKLAYV-YQNNIYLKQRPGDPP 142 (719)
T ss_dssp SCCC---SSBCCEEECSSTTCEEEE-ETTEEEEESSTTSCC
T ss_pred eecC---cccccceECCCCCEEEEE-ECCeEEEEeCCCCCc
Confidence 1111 1234567777775 4444 46789999864 443
No 336
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=23.30 E-value=2.1e+02 Score=31.76 Aligned_cols=58 Identities=22% Similarity=0.292 Sum_probs=37.6
Q ss_pred eeeeecCCeEEEEEcCC------------CEEEEEECCCCcEEEEEecCCCCCceeeEEEeeCC-eEEEEEc
Q 006913 232 TLTPGNNGYLYVTIPVR------------ALVLALDTSSGNILWHKSVGPLGSAEYAPVVDSNG-WISVGSL 290 (626)
Q Consensus 232 sI~~D~dG~LwVGT~~g------------G~l~alD~~tG~~~w~~~~~~l~~~~sspvvD~dG-~IWVGT~ 290 (626)
.++.|.+|+|||+++.+ ..+++.++.+|++.... ..+.+.-++.++..+|+ +|||.-+
T Consensus 480 NL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~-~~P~gaE~TG~~fspDg~tlfvniQ 550 (592)
T 3zwu_A 480 GLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFM-VGPIGCEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp EEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEE-ECCTTCEEEEEEECTTSSEEEEEEE
T ss_pred ceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEE-eCCCCccCcCeeECCCCCEEEEEEE
Confidence 47788999999999632 24677788888765432 23333446667777665 5666543
No 337
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=22.96 E-value=4.9e+02 Score=24.62 Aligned_cols=100 Identities=9% Similarity=0.012 Sum_probs=51.7
Q ss_pred CeEEEEcCCCeEEEEeCCCCeEEEEEcCC-CCCcceeeeeecC--C-eEEEEEcCCCEEEEEECCCCcE--EEEEecCCC
Q 006913 197 GSIYISNTQGELYSLSAHSPYFNWIQDLS-SFDKAFTLTPGNN--G-YLYVTIPVRALVLALDTSSGNI--LWHKSVGPL 270 (626)
Q Consensus 197 G~LwIGT~~GgL~~ld~~tg~~~w~~~~~-s~~~v~sI~~D~d--G-~LwVGT~~gG~l~alD~~tG~~--~w~~~~~~l 270 (626)
..|..|..++.|..+|.++++..-..... ....+.++....+ | .|..++ .++.+..+|..++.. .......
T Consensus 68 ~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s-~d~~v~~wd~~~~~~~~~~~~~~h-- 144 (297)
T 2pm7_B 68 TILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVAS-SDGKVSVVEFKENGTTSPIIIDAH-- 144 (297)
T ss_dssp SEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEE-TTSEEEEEEBCSSSCBCCEEEECC--
T ss_pred CEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEE-CCCcEEEEEecCCCceeeeeeecc--
Confidence 45666777888888888876321111111 1123445544333 5 455555 456777777665421 1111111
Q ss_pred CCceeeEEEeeC--------------CeEEEEEcCCeEEEEcC
Q 006913 271 GSAEYAPVVDSN--------------GWISVGSLDGLLYSFSP 299 (626)
Q Consensus 271 ~~~~sspvvD~d--------------G~IWVGT~~gGLy~~d~ 299 (626)
...+.++...++ ..|..|+.++.|..+|.
T Consensus 145 ~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~ 187 (297)
T 2pm7_B 145 AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKY 187 (297)
T ss_dssp SSCEEEEEECCCC------------CCEEEEEETTSCEEEEEE
T ss_pred cCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEE
Confidence 011222333322 36777888888888875
No 338
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=22.00 E-value=6e+02 Score=25.30 Aligned_cols=99 Identities=7% Similarity=0.016 Sum_probs=55.3
Q ss_pred EEEEcCCCeEEEEeCCCCeEEEEEcC---CC-CCcceeeeee--------cCCeEEEEEcCCCEEEEEECCCCcEEEEE-
Q 006913 199 IYISNTQGELYSLSAHSPYFNWIQDL---SS-FDKAFTLTPG--------NNGYLYVTIPVRALVLALDTSSGNILWHK- 265 (626)
Q Consensus 199 LwIGT~~GgL~~ld~~tg~~~w~~~~---~s-~~~v~sI~~D--------~dG~LwVGT~~gG~l~alD~~tG~~~w~~- 265 (626)
|..|..++.|..+|.+++........ .+ .+.+.++... .||++.+....++.+...|..++......
T Consensus 104 las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~ 183 (393)
T 4gq1_A 104 LACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGY 183 (393)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEE
T ss_pred EEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeec
Confidence 44555677788888777765443221 11 2334444332 25666655434567777776566544332
Q ss_pred ecCCCCCceeeEEEeeCC--eEEEEEcCCeEEEEcCC
Q 006913 266 SVGPLGSAEYAPVVDSNG--WISVGSLDGLLYSFSPS 300 (626)
Q Consensus 266 ~~~~l~~~~sspvvD~dG--~IWVGT~~gGLy~~d~~ 300 (626)
... ....+....+++ .|..|+.++.|..+|..
T Consensus 184 ~~~---~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~ 217 (393)
T 4gq1_A 184 PLS---SPGISVQFRPSNPNQLIVGERNGNIRIFDWT 217 (393)
T ss_dssp ECS---SCEEEEEEETTEEEEEEEEETTSEEEEEETT
T ss_pred CCC---CCcEEEEECCCCCceEEecCCCCEEEEEECC
Confidence 222 123445555554 47778888888888864
No 339
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=21.62 E-value=5.6e+02 Score=24.80 Aligned_cols=89 Identities=10% Similarity=0.097 Sum_probs=47.5
Q ss_pred eEEEEeCCCCeEEEEEcCCCCCcceeeeeecCCe-EEEEEcCC----CEEEEEECCCCcEEEEEecCCCCCceeeEEEee
Q 006913 207 ELYSLSAHSPYFNWIQDLSSFDKAFTLTPGNNGY-LYVTIPVR----ALVLALDTSSGNILWHKSVGPLGSAEYAPVVDS 281 (626)
Q Consensus 207 gL~~ld~~tg~~~w~~~~~s~~~v~sI~~D~dG~-LwVGT~~g----G~l~alD~~tG~~~w~~~~~~l~~~~sspvvD~ 281 (626)
.|+.++.+++.............+..+....||+ |+++...+ ..++.+|..+|+......... .. +...+
T Consensus 217 ~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~----~~-~~~s~ 291 (396)
T 3c5m_A 217 RMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPP----CS-HLMSN 291 (396)
T ss_dssp CCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCS----EE-EEEEC
T ss_pred eEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCC----CC-CCccC
Confidence 5888888776543221100011233445556674 55544321 348889988887654332221 22 55666
Q ss_pred -CCeEEEEE-----------------cCCeEEEEcCC
Q 006913 282 -NGWISVGS-----------------LDGLLYSFSPS 300 (626)
Q Consensus 282 -dG~IWVGT-----------------~~gGLy~~d~~ 300 (626)
+|.+++.+ .+..||.+|..
T Consensus 292 ~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~ 328 (396)
T 3c5m_A 292 FDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTK 328 (396)
T ss_dssp SSSSEEEEEECCC----------CCCCCCEEEEEETT
T ss_pred CCCceEEEecCCcceeeccccccccCCCCcEEEEecc
Confidence 77655542 13578888875
No 340
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=21.11 E-value=8.2e+02 Score=26.58 Aligned_cols=70 Identities=10% Similarity=0.119 Sum_probs=38.6
Q ss_pred EEecCCeEEEEE---CCeEEEEECCCCccccceeEEEecCCCCCCCCCCeeEEEEEEcCCeEEEEEc--C-----CeEEE
Q 006913 84 VHGGTGEVYIVA---ENRVLKVDLLKIGTSESATQVFYGTGSGKGGTGAIAGIAVSTSSSSVYINVK--G-----RALFA 153 (626)
Q Consensus 84 ~iD~dG~IwVgT---~ggL~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~I~s~~~d~dG~LwIgT~--~-----gGL~a 153 (626)
+...+|.||+.. ...+.++|+.++ .|...... +. ...-...+...+|+||+-.- + ..+.+
T Consensus 249 ~~~~~g~lyv~GG~~~~~v~~yd~~t~-------~W~~~~~~-~~--~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~ 318 (656)
T 1k3i_A 249 SMDGNGQIVVTGGNDAKKTSLYDSSSD-------SWIPGPDM-QV--ARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEV 318 (656)
T ss_dssp EECTTSCEEEECSSSTTCEEEEEGGGT-------EEEECCCC-SS--CCSSCEEEECTTSCEEEECCCCCSSSCCCCEEE
T ss_pred cCCCCCCEEEeCCCCCCceEEecCcCC-------ceeECCCC-Cc--cccccceEEecCCeEEEEeCcccCCcccccceE
Confidence 444678898864 346999999875 45432211 11 11112223334788887432 1 34788
Q ss_pred EeCCCcEEEEE
Q 006913 154 FMTHGQLLWSA 164 (626)
Q Consensus 154 ~d~~G~~~w~~ 164 (626)
||+... .|..
T Consensus 319 yd~~t~-~W~~ 328 (656)
T 1k3i_A 319 YSPSSK-TWTS 328 (656)
T ss_dssp EETTTT-EEEE
T ss_pred eCCCCC-ccee
Confidence 998633 3764
No 341
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=20.69 E-value=1.4e+02 Score=31.99 Aligned_cols=51 Identities=16% Similarity=0.279 Sum_probs=30.8
Q ss_pred CCeEEEEcCCCeEEEEeCCCCeEEEEE-cC---------C-CCCcceeeeeecCCeEEEEEc
Q 006913 196 EGSIYISNTQGELYSLSAHSPYFNWIQ-DL---------S-SFDKAFTLTPGNNGYLYVTIP 246 (626)
Q Consensus 196 dG~LwIGT~~GgL~~ld~~tg~~~w~~-~~---------~-s~~~v~sI~~D~dG~LwVGT~ 246 (626)
.|.++++...+.|.++..+.+...|.. .+ . ....+..+.++.||.|||.+.
T Consensus 293 ~g~~f~~~~~g~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~r~~~v~~~pdG~Lyv~~~ 354 (463)
T 2wg3_C 293 YGSYVFGDRNGNFLTLQQSPVTKQWQEKPLCLGTSGSCRGYFSGHILGFGEDELGEVYILSS 354 (463)
T ss_dssp TTCEEEEETTSCEEEEEC-----CCEEEEECEEETTSSCSCCCSEEEEEEECTTCCEEEEEE
T ss_pred cceEEEecCCCcEEEEEeCCCCceeeEEEeecCCcccccccccCcceEEEECCCCCEEEEec
Confidence 456788877778888866544322321 11 0 123466788899999999985
No 342
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=20.43 E-value=10 Score=27.34 Aligned_cols=11 Identities=18% Similarity=0.540 Sum_probs=7.2
Q ss_pred EEeeccccccc
Q 006913 418 CIFWRKKKLQG 428 (626)
Q Consensus 418 ~~~~~~~~~~~ 428 (626)
++|||+|+.|+
T Consensus 32 ~~~~RRr~~~~ 42 (44)
T 2ks1_B 32 GLFMRRRHIVR 42 (44)
T ss_dssp HHHHHTTTCCS
T ss_pred HHHhhhhHhhc
Confidence 45677777664
No 343
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=20.43 E-value=4.4e+02 Score=29.16 Aligned_cols=101 Identities=9% Similarity=0.020 Sum_probs=55.9
Q ss_pred CCeEEEEcCCCeEEEEeCCCCeEEEEEcCCCCC--c--ceeeeeecCCe-EEEEEcC--------CCEEEEEECCCCcEE
Q 006913 196 EGSIYISNTQGELYSLSAHSPYFNWIQDLSSFD--K--AFTLTPGNNGY-LYVTIPV--------RALVLALDTSSGNIL 262 (626)
Q Consensus 196 dG~LwIGT~~GgL~~ld~~tg~~~w~~~~~s~~--~--v~sI~~D~dG~-LwVGT~~--------gG~l~alD~~tG~~~ 262 (626)
+|.+.+.. ++.|+.+|..+++..-........ . ...+....||+ |.+++.. .+.++.+|..+|+..
T Consensus 27 dg~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~ 105 (740)
T 4a5s_A 27 DHEYLYKQ-ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI 105 (740)
T ss_dssp SSEEEEEE-TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC
T ss_pred CCcEEEEc-CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE
Confidence 55554444 788999999988764332211111 1 11133455774 5555421 145677898888654
Q ss_pred EEEecCCCCCceeeEEEeeCCeEEEEEcCCeEEEEcCC
Q 006913 263 WHKSVGPLGSAEYAPVVDSNGWISVGSLDGLLYSFSPS 300 (626)
Q Consensus 263 w~~~~~~l~~~~sspvvD~dG~IWVGT~~gGLy~~d~~ 300 (626)
. +.........+...+||...+-+.++.||..+..
T Consensus 106 ~---l~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~ 140 (740)
T 4a5s_A 106 T---EERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEP 140 (740)
T ss_dssp C---SSCCCTTEEEEEECSSTTCEEEEETTEEEEESST
T ss_pred E---cccCCCcceeeEECCCCCEEEEEECCeEEEEECC
Confidence 2 1111123456777778753333356789988864
No 344
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=20.32 E-value=9e+02 Score=26.72 Aligned_cols=60 Identities=13% Similarity=0.217 Sum_probs=33.3
Q ss_pred EEEEeCCCCeEEEEEcCC-CC-----------C---c-ceeeeeecCC---eEEEEEc--CCCEEEEEECCCCcE--EEE
Q 006913 208 LYSLSAHSPYFNWIQDLS-SF-----------D---K-AFTLTPGNNG---YLYVTIP--VRALVLALDTSSGNI--LWH 264 (626)
Q Consensus 208 L~~ld~~tg~~~w~~~~~-s~-----------~---~-v~sI~~D~dG---~LwVGT~--~gG~l~alD~~tG~~--~w~ 264 (626)
|..+|-.+|+..+..+.. .. + . ..+++ +-|| .+.++-. ....+.++|..++++ +|.
T Consensus 231 L~vfdG~TG~~l~~~~~~p~rg~~~~WGD~ygnR~drf~~~va-yLDG~~Ps~v~~rGyYtr~~v~A~d~~~~~L~~~W~ 309 (591)
T 2zux_A 231 LTVFQGSTGKELVTANFEPARGNVSDWGDSYGNRVDRFLAGIA-YLDGQRPSLIMTRGYYAKTMLVAYNFRDGKLSKLWT 309 (591)
T ss_dssp EEEEETTTCCEEEEEECSSCCCCGGGGTCSSSSGGGCEEEEEE-CTTSSSCEEEEEECCSSSCEEEEEEEETTEEEEEEE
T ss_pred EEEEeCCCCCEEecccCCCCCCcccccccccccccccceeeEE-ECCCCCceEEEeccccceeEEEEEECCCCceEEEEE
Confidence 889999899988775432 10 0 0 11221 2233 3444431 123578888767764 787
Q ss_pred EecC
Q 006913 265 KSVG 268 (626)
Q Consensus 265 ~~~~ 268 (626)
+...
T Consensus 310 ~d~~ 313 (591)
T 2zux_A 310 LDSS 313 (591)
T ss_dssp EETT
T ss_pred ecCC
Confidence 7553
Done!