Citrus Sinensis ID: 006915

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620------
Protein Sequence
MDSGNFVLQDDQVRKNLWESFKYPTDTFLAGMYMGENLSLTSWAGHDDPKPGNFTFKMDQGENQYQITKPLIRHWRSAESKDVFSSNEIIPYQILNLLSNFSHSVKPTGKNAVHPNLIVPSIDYSRTRLIMNYTGEIQYWTEDKVKGWSLIWREPRDNCSVFHYCGNFGICNSNHKRKCQCLQGFVPSSPERWSSEDFLGGCIRKTALCGGKDMFLKRQITKVGETDSCLPVASEAECSKKCRGFCPCTAYSYKESKRRDEAGTCCIWIEELKDLREDFSNGGHELYIRVAATDLESAENKTEGGSTQQVEAFNGRKKHQWTLIFGMTIASGIILSCIIIYFYTRRKRINSQGRSINRPNMAAPFYESARHVKDMVVDSDQFKEEEKQGIDLPFIDFESILAATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAFVIRRGSSSSASSSNKPESNNELTNTLECR
Secondary Structure (PSIPRED)
cccccEEEEEccccccEEEEccccccccccccEEcccEEEEEcccccccccccEEEEEEccccEEEEEcccEEEEEEcccccccccccccccccccccccEEEEEEEcccEEEEEEEEEccccccEEEEEEcccccEEEEEEcccccEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccEEEcccccccccccccccccHHHHHHHHHccccEEEEEccccccccccccEEEEcccccccccccccccEEEEEEEEcccccccccccccccccHHHHcccccccEEEEEEEEHHHHHHHHHHHHHEEEEEEEcccccccccccccccccccccccccccccccccccHHHHccccccccccHHHHHHHHHcccccccccccccccEEEEEcccccEEEEEEcccccccHHHHHHHcccccccHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHcccccEEEEccccccccccccccccccccccccccccHHHHccccccccEEEEEEEEEEEEEcccccccHHHHHHHHcccccccccccccEEEccccccccccccccccccccEEEEEEEc
Secondary Structure Prediction (SSPRO)
cccccEEEEEcccccEEEEEccccccccccccccccccEEEEcccccccccccEEEEEcccccEEEEEcccEEEEEccccccEEEcccccccccccccccEEEEEEEcccEEEEEEEEEccccEEEEEEEEccccEEEEEEEcccccEEEEEEccccccccHcccccccEcccccccccccccccccccHHHHHccccccccEEccccccccccEEEEccccccccccEEEcccHHHHHHHHHHcccEEEEEEEcccccccccEEEEEcccHHHHHHHccccccEEEEEEcHHHHHHHHHccccccccccccccccccHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccEcHHHHHHHHcccccccccccccccccEccEcccccEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHcccccHHHHccHHHHHHHHHHHHHHHHHHHHHcHccEEcccccHHHEEEcccccEEEccccccEEccccccccccccccEEEEEEcccccHHHHHcccEEEcccHEEEEEEEEEEEcccccccccccccccccHHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
mdsgnfvlqddQVRKNLWesfkyptdtflagmymgenlsltswaghddpkpgnftfkmdqgenqyqitkplirhwrsaeskdvfssneiipYQILNLLsnfshsvkptgknavhpnlivpsidySRTRLIMNYTGEIQYWTEDKVKGWsliwreprdncsvfhycgnfgicnsnhkrkcqclqgfvpssperwssedflggcirktalcggkdmfLKRQitkvgetdsclpvaseaecskkcrgfcpctaysykeskrrdeagtCCIWIEELKDLREDFSNGGHELYIRVAATDlesaenkteggstQQVEAFNGRKKHQWTLIFGMTIASGIILSCIIIYFYTRRKrinsqgrsinrpnmaapfyesarhvkdmvvdsdqfkeeekqgidlpfidFESILAATDNFseanklgkggfgpvykakfpggqqIAVKRLSsasgqgleEFKNeietsnsnatiGANVKAFVREmktfsdptlSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTsnilldqemnpkisdFGLALDMMDqklhasskpneILKCINVGLlcvqedpndrptmSDVVIMLGSeamnlatpkrpafvirrgssssasssnkpesnneltntlecr
Flexible Loop (DISEMBL)
mdsgnfvlqddqvrkNLWESFKYPTDTFLAGMYMGENLSLTSWAGHDDPKPGNFTFKMDQGENQYQITKPLIRHWRSAESKDVFSSNEIIPYQILNLLSNFSHSVKptgknavhpnliVPSIDYSRTRLIMNYTGEIQYWTEDKVKGWSLIWREPRDNCSVFHYCGNFGICNSNHKRKCQCLQGFVPSSPERWSSEDFLGGCIRKTALCGGKDMFLKRQITkvgetdsclpvaseaecskkcrgfcPCTAysykeskrrdeaGTCCIWIEELKDLREDFSNGGHELYIRVAATDLESAENKTEGGSTQQVEAFNGRKKHQWTLIFGMTIASGIILSCIIIYFYTRRKRInsqgrsinrpnmAAPFYESARHVKDMVVDSDQFKEEEKQGIDLPFIDFESILAATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFkneietsnsnatIGANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKtsnilldqemNPKISDFGLALDMMDQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAFVIRRgssssasssnkpesnneltntlecr
Low Complexity Region (SEG)
MDSGNFVLQDDQVRKNLWESFKYPTDTFLAGMYMGENLSLTSWAGHDDPKPGNFTFKMDQGENQYQITKPLIRHWRSAESKDVFSSNEIIPYQILNLLSNFSHSVKPTGKNAVHPNLIVPSIDYSRTRLIMNYTGEIQYWTEDKVKGWSLIWREPRDNCSVFHYCGNFGICNSNHKRKCQCLQGFVPSSPERWSSEDFLGGCIRKTALCGGKDMFLKRQITKVGETDSCLPVASEAECSKKCRGFCPCTAYSYKESKRRDEAGTCCIWIEELKDLREDFSNGGHELYIRVAATDLESAENKTEGGSTQQVEAFNGRKKHQWTLIFGMTiasgiilsciiiYFYTRRKRINSQGRSINRPNMAAPFYESARHVKDMVVDSDQFKEEEKQGIDLPFIDFESILAATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAFVIRRGssssasssNKPESNNELTNTLECR
Disordered region (IsUnstruct)
******VLQDDQVRKNLWESFKYPTDTFLAGMYMGENLSLTSWAGH*******FTFKMDQGENQYQITKPLIRHWRSAESKDVFSSNEIIPYQILNLLSNFSHSVKPTGKNAVHPNLIVPSIDYSRTRLIMNYTGEIQYWTEDKVKGWSLIWREPRDNCSVFHYCGNFGICNSNHKRKCQCLQGFVPSSPERWSSEDFLGGCIRKTALCGGKDMFLKRQITKVGETDSCLPVASEAECSKKCRGFCPCTAYSYKESKRRDEAGTCCIWIEELKDLREDFSNGGHELYIRVAAT*******************FNGRKKHQWTLIFGMTIASGIILSCIIIYFYTRRKRI***************************************GIDLPFIDFESILAATDNFSEANKLGKGGFGPVYKAKFPGGQQIA**************************TIGANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD*********NEILKCINVGLLCVQE*********DVVIMLG*******************************************
Disordered Region (DISOPRED)
MDSGNFVLQDDQVRKNLWESFKYPTDTFLAGMYMGENLSLTSWAGHDDPKPGNFTFKMDQGENQYQITKPLIRHWRSAESKDVFSSNEIIPYQILNLLSNFSHSVKPTGKNAVHPNLIVPSIDYSRTRLIMNYTGEIQYWTEDKVKGWSLIWREPRDNCSVFHYCGNFGICNSNHKRKCQCLQGFVPSSPERWSSEDFLGGCIRKTALCGGKDMFLKRQITKVGETDSCLPVASEAECSKKCRGFCPCTAYSYKESKRRDEAGTCCIWIEELKDLREDFSNGGHELYIRVAATDLESAENKTE***TQQVEAFNGRKKHQWTLIFGMTIASGIILSCIIIYFYTRRKRINSQ***********************************QGIDLPFIDFESILAATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAFV*********************TNTLECR
Disordered Region (DISEMBL)
MDSGNFVLQDDQVRKNLWESFKYPTDTFLAGMYMGENLSLTSWAGHDDPKPGNFTFKMDQGENQYQITKPLIRHWRSAESKDVFSSNEIIPYQILNLLSNFSHSVKPTGKNAVHPNLIVPSIDYSRTRLIMNYTGEIQYWTEDKVKGWSLIWREPRDNCSVFHYCGNFGICNSNHKRKCQCLQGFVPSSPERWSSEDFLGGCIRKTALCGGKDMFLKRQITKVGETDSCLPVASEAECSKKCRGFCPCTAYSYKESKRRDEAGTCCIWIEELKDLREDFSNGGHELYIRVAATDLE************QVEAFNGRKKHQWTLIFGMTIASGIILSCIIIYFYTRRKRINSQGRSINRPNMAAPFYESARHVKDMVVDSDQFKEEEKQGIDLPFIDFESILAATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAFVI***************************
Disordered Region (DISPRO)
**SGNFVLQDDQVRKNLWESFKYPTDTFLAGMYMGENLSLTSWAGHDDPKPGNFTFKMDQGENQYQITKPLIRHWRSAESKDVFSSNEIIPYQILNLLSNFSHSVKPTGKNAVHPNLIVPSIDYSRTRLIMNYTGEIQYWTEDKVKGWSLIWREPRDNCSVFHYCGNFGICNSNHKRKCQCLQGFVPSSPERWSSEDFLGGCIRKTALCGGKDMFLKRQITKVGETDSCLPVASEAECSKKCRGFCPCTAYSYKESKRRDEAGTCCIWIEELKDLREDFSNGGHELYIRVAATDLESAENK***************KKHQWTLIFGMTIASGIILSCIIIYFYTRRKRINS*************************************GIDLPFIDFESILAATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAFVIRRGSSSSASSSNKPESNNELTNTLEC*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDSGNFVLQDDQVRKNLWESFKYPTDTFLAGMYMGENLSLTSWAGHDDPKPGNFTFKMDQGENQYQITKPLIRHWRSAESKDVFSSNEIIPYQILNLLSNFSHSVKPTGKNAVHPNLIVPSIDYSRTRLIMNYTGEIQYWTEDKVKGWSLIWREPRDNCSVFHYCGNFGICNSNHKRKCQCLQGFVPSSPERWSSEDFLGGCIRKTALCGGKDMFLKRQITKVGETDSCLPVASEAECSKKCRGFCPCTAYSYKESKRRDEAGTCCIWIEELKDLREDFSNGGHELYIRVAATDLESAENKTEGGSTQQVEAFNGRKKHQWTLIFGMTIASGIILSCIIIYFYTRRKRINSQGRSINRPNMAAPFYESARHVKDMVVDSDQFKEEEKQGIDLPFIDFESILAATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAFVIRRGSSSSASSSNKPESNNELTNTLECR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	626	2.2.26 [Sep-21-2011]
Q9ZR08	852	G-type lectin S-receptor-	yes	no	0.829	0.609	0.459	1e-126
O81905	850	Receptor-like serine/thre	yes	no	0.798	0.588	0.365	5e-85
Q39086	843	Receptor-like serine/thre	no	no	0.803	0.596	0.361	2e-78
Q09092	857	Putative serine/threonine	N/A	no	0.801	0.585	0.342	3e-76
P0DH86	853	G-type lectin S-receptor-	no	no	0.811	0.595	0.334	6e-76
Q9S972	847	Receptor-like serine/thre	no	no	0.797	0.589	0.352	1e-75
Q9ZT07	833	G-type lectin S-receptor-	no	no	0.801	0.602	0.353	2e-75
Q9SXB8	842	G-type lectin S-receptor-	no	no	0.777	0.578	0.345	7e-74
O64781	831	G-type lectin S-receptor-	no	no	0.766	0.577	0.331	2e-72
Q9SY89	842	Putative G-type lectin S-	no	no	0.809	0.602	0.335	8e-72

>sp|Q9ZR08|Y4230_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 OS=Arabidopsis thaliana GN=At4g03230 PE=3 SV=3

 Score =  452 bits (1163), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 259/564 (45%), Positives = 339/564 (60%), Gaps = 45/564 (7%)

Query: 1   MDSGNFVLQDDQVRKNL-WESFKYPTDTFLAGMYMGENLSLTSWAGHDDPKPGNFTFKMD 59
           MD+GN VL  D    N+ W+SF+ PTDTFL GM M EN++L+SW   +DP  GNFTF+MD
Sbjct: 134 MDNGNLVLISDGNEANVVWQSFQNPTDTFLPGMRMDENMTLSSWRSFNDPSHGNFTFQMD 193

Query: 60  QGEN-QYQITKPLIRHWRSAESKDVFSSNEIIPYQILNLLSNFSHSVKPTGKNAVHPNLI 118
           Q E+ Q+ I K  +R+W+S  S     S+E+ PY I   LSNF+ +V  T  NA  P L 
Sbjct: 194 QEEDKQFIIWKRSMRYWKSGISGKFIGSDEM-PYAISYFLSNFTETV--TVHNASVPPLF 250

Query: 119 VPSIDYSRTRLIMNYTGEIQYWTEDKVKGWSLIWREPRDNCSVFHYCGNFGICNSNHKRK 178
                Y+ TR  M+ +G+ QY+  D  + W+ IW EPRD CSV++ CGNFG CNS ++  
Sbjct: 251 TSL--YTNTRFTMSSSGQAQYFRLDGERFWAQIWAEPRDECSVYNACGNFGSCNSKNEEM 308

Query: 179 CQCLQGFVPSSPERWSSEDFLGGCIRKTALCGGK-----DMFLKRQITKVGETDSCLPVA 233
           C+CL GF P+  E+W   DF GGC R++ +CG       DMFL   + +VG  DS     
Sbjct: 309 CKCLPGFRPNFLEKWVKGDFSGGCSRESRICGKDGVVVGDMFLNLSVVEVGSPDSQFDAH 368

Query: 234 SEAECSKKCRGFCPCTAYSYKESKRRDEAGTCCIWIEELKDLREDFSNGGHELYIRVAAT 293
           +E EC  +C   C C AYSY+E         C IW+E+L +L+E +  G   ++IRVA  
Sbjct: 369 NEKECRAECLNNCQCQAYSYEEVDILQSNTKCWIWLEDLNNLKEGYL-GSRNVFIRVAVP 427

Query: 294 DLESAENKTEGGSTQQVEAFNGRKKHQWTLIFGMTIASG---IILSCIIIYFYTRRKRIN 350
           D+ S   +  G          G  K    LI  +T  S    ++LS    Y + +R+++N
Sbjct: 428 DIGSHVERGRGRY--------GEAKTPVVLIIVVTFTSAAILVVLSSTASYVFLQRRKVN 479

Query: 351 SQGRSINRPNMAAPFYESARHVKDMVVDSDQFKEEEKQGIDLPFIDFESILAATDNFSEA 410
            +  SI R        +S RH+K+++ +S +FK+++ QGID+P  + E+IL AT NFS A
Sbjct: 480 KELGSIPR---GVHLCDSERHIKELI-ESGRFKQDDSQGIDVPSFELETILYATSNFSNA 535

Query: 411 NKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEI------ETSNSNATIGAN 464
           NKLG+GGFGPVYK  FPG Q+IAVKRLS  SGQGLEEFKNE+      +  N    +G  
Sbjct: 536 NKLGQGGFGPVYKGMFPGDQEIAVKRLSRCSGQGLEEFKNEVVLIAKLQHRNLVRLLGYC 595

Query: 465 V----KAFVREMKTFS-------DPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIH 513
           V    K  + E            D  L   L W+MR NII+GIARGLLYLHQDSRLRIIH
Sbjct: 596 VAGEEKLLLYEYMPHKSLDFFIFDRKLCQRLDWKMRCNIILGIARGLLYLHQDSRLRIIH 655

Query: 514 RDLKTSNILLDQEMNPKISDFGLA 537
           RDLKTSNILLD+EMNPKISDFGLA
Sbjct: 656 RDLKTSNILLDEEMNPKISDFGLA 679

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|O81905|SD18_ARATH Receptor-like serine/threonine-protein kinase SD1-8 OS=Arabidopsis thaliana GN=SD18 PE=1 SV=1

 Score =  315 bits (808), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 211/578 (36%), Positives = 308/578 (53%), Gaps = 78/578 (13%)

Query: 1   MDSGNFVLQDDQVRKN---LWESFKYPTDTFLAGMYMGE------NLSLTSWAGHDDPKP 51
           +D+GNFVL+D +       LW+SF +PTDT L  M +G       N  + SW   DDP  
Sbjct: 133 LDNGNFVLRDSKNSAPDGVLWQSFDFPTDTLLPEMKLGWDAKTGFNRFIRSWKSPDDPSS 192

Query: 52  GNFTFKMD-QGENQYQITKPLIRHWRSAESKDVFSSN--EIIPYQILNLLSNFSHSVKPT 108
           G+F+FK++ +G  +  +     R +RS     +  S   E+ P++ +  + NF+ S    
Sbjct: 193 GDFSFKLETEGFPEIFLWNRESRMYRSGPWNGIRFSGVPEMQPFEYM--VFNFTTS---- 246

Query: 109 GKNAVHPNLIVPSIDYSRTRLIMNYTGEIQYWTE-DKVKGWSLIWREPRDNCSVFHYCGN 167
            +   +   I  S  YSR  L ++ +G +Q +T  +  + W+  W  P+D C  +  CG 
Sbjct: 247 KEEVTYSFRITKSDVYSR--LSISSSGLLQRFTWIETAQNWNQFWYAPKDQCDEYKECGV 304

Query: 168 FGICNSNHKRKCQCLQGFVPSSPERWSSEDFLGGCIRKTAL-CGGKDMFLKRQITKVGET 226
           +G C+SN    C C++GF P +P+ W   D   GC+RKT L CGG D F++ +  K+ +T
Sbjct: 305 YGYCDSNTSPVCNCIKGFKPRNPQVWGLRDGSDGCVRKTLLSCGGGDGFVRLKKMKLPDT 364

Query: 227 D--SCLPVASEAECSKKCRGFCPCTAYSYKESKRRDEAGTCCIWIEELKDLREDFSNGGH 284
              S        EC +KC   C CTA++   +  R     C  W  EL D+R +++ GG 
Sbjct: 365 TTASVDRGIGVKECEQKCLRDCNCTAFA--NTDIRGSGSGCVTWTGELFDIR-NYAKGGQ 421

Query: 285 ELYIRVAATDLESAENKTEGGSTQQVEAFNGRKKHQWTLIFGMTIA-SGIILSCIIIYFY 343
           +LY+R+AATDLE   N++                     I G +I  S ++L   II+F 
Sbjct: 422 DLYVRLAATDLEDKRNRSAK-------------------IIGSSIGVSVLLLLSFIIFFL 462

Query: 344 TRRKRINSQGRSINRPNMAAPFYESARHVKDMVVDSDQF-------KEEEKQGIDLPFID 396
            +RK    Q RSI    +  P  +     +D++++           +E     ++LP ++
Sbjct: 463 WKRK----QKRSIL---IETPIVDHQLRSRDLLMNEVVISSRRHISRENNTDDLELPLME 515

Query: 397 FESILAATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETSN 456
           FE +  AT+NFS ANKLG+GGFG VYK K   GQ++AVKRLS  S QG +EFKNE++   
Sbjct: 516 FEEVAMATNNFSNANKLGQGGFGIVYKGKLLDGQEMAVKRLSKTSVQGTDEFKNEVKLIA 575

Query: 457 S----------NATIGANVKAFVRE-MKTFS------DPTLSALLHWEMRFNIIIGIARG 499
                         + A  K  + E ++  S      D + ++ L+W+MRF+II GIARG
Sbjct: 576 RLQHINLVRLLACCVDAGEKMLIYEYLENLSLDSHLFDKSRNSKLNWQMRFDIINGIARG 635

Query: 500 LLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           LLYLHQDSR RIIHRDLK SNILLD+ M PKISDFG+A
Sbjct: 636 LLYLHQDSRFRIIHRDLKASNILLDKYMTPKISDFGMA 673

Involved in the regulation of cellular expansion and differentiation.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q39086|SD17_ARATH Receptor-like serine/threonine-protein kinase SD1-7 OS=Arabidopsis thaliana GN=SD17 PE=1 SV=1

 Score =  294 bits (752), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 206/570 (36%), Positives = 300/570 (52%), Gaps = 67/570 (11%)

Query: 1   MDSGNFVLQDDQVRKNLWESFKYPTDTFLAGMYMGE------NLSLTSWAGHDDPKPGNF 54
           +D+GNF+L+D   R  LW+SF +PTDT LA M +G       N  L SW   DDP  G F
Sbjct: 131 LDNGNFLLRDSNNRL-LWQSFDFPTDTLLAEMKLGWDQKTGFNRILRSWKTTDDPSSGEF 189

Query: 55  TFKMDQGE-NQYQITKPLIRHWRSAESKDVFSSNEIIPYQILNLLSNFSHSVKPTGKNAV 113
           + K++  E  ++ I       +RS     +  S+     Q+  ++ NF+ S     +   
Sbjct: 190 STKLETSEFPEFYICSKESILYRSGPWNGMRFSSVPGTIQVDYMVYNFTAS----KEEVT 245

Query: 114 HPNLIVPSIDYSRTRLIMNYTGEIQYWTE-DKVKGWSLIWREPRDNCSVFHYCGNFGICN 172
           +   I  +  YSR  L +N  G +Q  T  +  + W  +W  P+D C  +  CGNFG C+
Sbjct: 246 YSYRINKTNLYSR--LYLNSAGLLQRLTWFETTQSWKQLWYSPKDLCDNYKVCGNFGYCD 303

Query: 173 SNHKRKCQCLQGFVPSSPERWSSEDFLGGCIRKTAL-CGGKDMFLKRQITKVGETDSCLP 231
           SN    C C++GF P + + W   D   GC+RKT L C G+D F + +  K+ +T + + 
Sbjct: 304 SNSLPNCYCIKGFKPVNEQAWDLRDGSAGCMRKTRLSCDGRDGFTRLKRMKLPDTTATI- 362

Query: 232 VASE---AECSKKCRGFCPCTAYSYKESKRRDEAGTCCIWIEELKDLREDFSNGGHELYI 288
           V  E     C ++C   C CTA++   +  R+    C IW  E+ D+R +++ GG +LY+
Sbjct: 363 VDREIGLKVCKERCLEDCNCTAFA--NADIRNGGSGCVIWTREILDMR-NYAKGGQDLYV 419

Query: 289 RVAATDLESAENKTEGGSTQQVEAFNGRKKHQWTLIFGMTIASGIIL--SCIIIYFYTRR 346
           R+AA +LE    K E                    I G +I   I+L  S +I +F+ R+
Sbjct: 420 RLAAAELEDKRIKNEK-------------------IIGSSIGVSILLLLSFVIFHFWKRK 460

Query: 347 KRINSQGRSINRPNMAAPFYESARHVKDMVVDSDQFKEEEKQGIDLPFIDFESIL--AAT 404
           ++   +  +I  PN+     + +  + D+VV    +  +EK+   L     E      AT
Sbjct: 461 QK---RSITIQTPNVDQVRSQDS-LINDVVVSRRGYTSKEKKSEYLELPLLELEALATAT 516

Query: 405 DNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEI------ETSNSN 458
           +NFS  NKLG+GGFG VYK +   G++IAVKRLS  S QG +EF NE+      +  N  
Sbjct: 517 NNFSNDNKLGQGGFGIVYKGRLLDGKEIAVKRLSKMSSQGTDEFMNEVRLIAKLQHINLV 576

Query: 459 ATIGANV----KAFVRE-MKTFS------DPTLSALLHWEMRFNIIIGIARGLLYLHQDS 507
             +G  V    K  + E ++  S      D T S+ L+W+ RF+II GIARGLLYLHQDS
Sbjct: 577 RLLGCCVDKGEKMLIYEYLENLSLDSHLFDQTRSSNLNWQKRFDIINGIARGLLYLHQDS 636

Query: 508 RLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           R RIIHRDLK SN+LLD+ M PKISDFG+A
Sbjct: 637 RCRIIHRDLKASNVLLDKNMTPKISDFGMA 666

Involved in the regulation of cellular expansion and differentiation. Mediates subcellular relocalization of PUB9 from nucleus to plasma membrane in a protein-phosphorylation-dependent manner. May be involved in the abscisic acid-mediated signaling pathway, at least during germination.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q09092|SRK6_BRAOE Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=2

 Score =  286 bits (733), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 197/576 (34%), Positives = 291/576 (50%), Gaps = 74/576 (12%)

Query: 1   MDSGNFVLQD---DQVRKNLWESFKYPTDTFLAGMYMGENLS------LTSWAGHDDPKP 51
           + +GNFV++D   +   + LW+SF YPTDT L  M +G NL       LTSW   DDP  
Sbjct: 135 LANGNFVMRDSSNNDASEYLWQSFDYPTDTLLPEMKLGYNLKTGLNRFLTSWRSSDDPSS 194

Query: 52  GNFTFKMD-QGENQYQITKPLIRHWRSAESKDV-FSS---NEIIPYQILNLLSNFSHSVK 106
           GNF++K++ Q   ++ +++      RS     + FS    ++ + Y + N + N      
Sbjct: 195 GNFSYKLETQSLPEFYLSRENFPMHRSGPWNGIRFSGIPEDQKLSYMVYNFIEN------ 248

Query: 107 PTGKNAVHPNLIVPSIDYSRTRLIMNYTGEIQYWTEDKVKGWSLIWREPRD-NCSVFHYC 165
              +   +   +  +  YSR  LI     +   W    ++ W+  W  P D  C  +  C
Sbjct: 249 --NEEVAYTFRMTNNSFYSRLTLISEGYFQRLTWYPS-IRIWNRFWSSPVDPQCDTYIMC 305

Query: 166 GNFGICNSNHKRKCQCLQGFVPSSPERWSSEDFLGGCIRKTALCGGKDMFLKRQITKVGE 225
           G +  C+ N    C C+QGF P + ++W    + GGCIR+T L    D F + +  K+ E
Sbjct: 306 GPYAYCDVNTSPVCNCIQGFNPRNIQQWDQRVWAGGCIRRTQLSCSGDGFTRMKKMKLPE 365

Query: 226 TDSCLPVASEA--ECSKKCRGFCPCTAYSYKESKRRDEAGTCCIWIEELKDLREDFSNG- 282
           T       S    EC K+C   C CTA++   +  R+    C IW E L+D+R   ++  
Sbjct: 366 TTMATVDRSIGVKECKKRCISDCNCTAFA--NADIRNGGSGCVIWTERLEDIRNYATDAI 423

Query: 283 -GHELYIRVAATDLESAENKTEGGSTQQVEAFNGRKKHQWTLIFGMTIASGIILSCIIIY 341
            G +LY+R+AA D+    N +            G+       I  +T+   ++L  I+  
Sbjct: 424 DGQDLYVRLAAADIAKKRNAS------------GK-------IISLTVGVSVLLLLIMFC 464

Query: 342 FYTRR-KRINSQGRSI--NRPNMAAPFYESARHVKDMVVDSDQFKEEEKQGIDLPFIDFE 398
            + R+ KR  +   SI   + N   P  E     K     S ++K EE   ++LP I+ E
Sbjct: 465 LWKRKQKRAKASAISIANTQRNQNLPMNEMVLSSKREF--SGEYKFEE---LELPLIEME 519

Query: 399 SILAATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEI------ 452
           +++ AT+NFS  NKLG+GGFG VYK +   G++IAVKRLS  S QG +EF NE+      
Sbjct: 520 TVVKATENFSSCNKLGQGGFGIVYKGRLLDGKEIAVKRLSKTSVQGTDEFMNEVTLIARL 579

Query: 453 ETSNSNATIGANV----KAFVRE-MKTFS------DPTLSALLHWEMRFNIIIGIARGLL 501
           +  N    +G  +    K  + E ++  S        T  + L+W  RF+I  G+ARGLL
Sbjct: 580 QHINLVQVLGCCIEGDEKMLIYEYLENLSLDSYLFGKTRRSKLNWNERFDITNGVARGLL 639

Query: 502 YLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           YLHQDSR RIIHRDLK SNILLD+ M PKISDFG+A
Sbjct: 640 YLHQDSRFRIIHRDLKVSNILLDKNMIPKISDFGMA 675

Involved in sporophytic self-incompatibility system (the inability of flowering plants to achieve self-fertilization), probably acting in combination with S-locus-specific glycoproteins. Interaction with a ligand in the extracellular domain triggers the protein kinase activity of the cytoplasmic domain.

Brassica oleracea var. acephala (taxid: 3713)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P0DH86|SRK_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SRK OS=Arabidopsis thaliana GN=SRK PE=2 SV=1

 Score =  285 bits (730), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 190/568 (33%), Positives = 296/568 (52%), Gaps = 60/568 (10%)

Query: 1   MDSGNFVLQDDQVRKN---LWESFKYPTDTFLAGMYMGE------NLSLTSWAGHDDPKP 51
           +D+GNFVL+  ++ ++   LW+SF +PTDT L  M +G       N  +TSW    DP  
Sbjct: 134 LDNGNFVLRGSKINESDEFLWQSFDFPTDTLLPQMKLGRDHKRGLNRFVTSWKSSFDPSS 193

Query: 52  GNFTFKMDQ-GENQYQITKPLIRHWRSAESKDVFSSNEIIPYQILNLLSNFSHSVKPTGK 110
           G+F FK++  G  ++      +  +RS     +  S  +   Q  +++ NF+ +     +
Sbjct: 194 GSFMFKLETLGLPEFFGFTSFLEVYRSGPWDGLRFSGILEMQQWDDIIYNFTEN-----R 248

Query: 111 NAVHPNLIVPSIDYSRTRLIMNYTGEIQ-YWTEDKVKGWSLIWREPRDNCSVFHYCGNFG 169
             V     V   + S +RL +N  G ++ +  E   + W++ W  P+D C ++  CG + 
Sbjct: 249 EEVAYTFRVTDHN-SYSRLTINTVGRLEGFMWEPTQQEWNMFWFMPKDTCDLYGICGPYA 307

Query: 170 ICNSNHKRKCQCLQGFVPSSPERWSSEDFLGGCIRKTALCGGKDMFLKRQITKVGETDSC 229
            C+ +    C C++GF P SP+ W+S D  G C RKT L  G+D F +    K+  T + 
Sbjct: 308 YCDMSTSPTCNCIKGFQPLSPQDWASGDVTGRCRRKTQLTCGEDRFFRLMNMKIPATTAA 367

Query: 230 L--PVASEAECSKKCRGFCPCTAYSYKESKRRDEAGTCCIWIEELKDLREDFSNGGHELY 287
           +        EC +KC+  C CTAY+   S  R+    C IWI E +D+R +++  G +L+
Sbjct: 368 IVDKRIGLKECEEKCKTHCNCTAYA--NSDIRNGGSGCIIWIGEFRDIR-NYAADGQDLF 424

Query: 288 IRVAATDLESAENKTEGGSTQQVEAFNGRKKHQWTLIFGMTIASGIILSCIIIYFYTRRK 347
           +R+AA +                  F  R+  +  +I  +   S +++   IIY + ++K
Sbjct: 425 VRLAAAE------------------FGERRTIRGKIIGLIIGISLMLVLSFIIYCFWKKK 466

Query: 348 RINSQGRSINRPNMAAPFYESARHVKDMVVDSDQFKEEEKQGIDLPFIDFESILAATDNF 407
           +   + R+   P       +       +V+ S +    E++ ++LP  +FE+++ AT+NF
Sbjct: 467 Q--KRARATAAPIGYRDRIQELIITNGVVMSSGRRLLGEEEDLELPLTEFETVVMATENF 524

Query: 408 SEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETSNS---------- 457
           S++N LG+GGFG VYK +   GQ+IAVKRLS  S QG  EFKNE+               
Sbjct: 525 SDSNILGRGGFGIVYKGRLLDGQEIAVKRLSEMSSQGTNEFKNEVRLIARLQHINLVRLL 584

Query: 458 NATIGANVKAFVREM--------KTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRL 509
           +  I A+ K  + E           F     S  L+W+ RF+II GIARGLLYLHQDSR 
Sbjct: 585 SCCIYADEKILIYEYLENGSLDSHLFETTQSSNKLNWQTRFSIINGIARGLLYLHQDSRF 644

Query: 510 RIIHRDLKTSNILLDQEMNPKISDFGLA 537
           +IIHRDLK SN+LLD+ M PKISDFG+A
Sbjct: 645 KIIHRDLKASNVLLDKNMTPKISDFGMA 672

Female specificity determinant of self-incompatibility.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9S972|SD16_ARATH Receptor-like serine/threonine-protein kinase SD1-6 OS=Arabidopsis thaliana GN=SD16 PE=1 SV=2

 Score =  285 bits (728), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 204/578 (35%), Positives = 300/578 (51%), Gaps = 79/578 (13%)

Query: 1   MDSGNFVLQDDQVRKN---LWESFKYPTDTFLAGMYMGE-------NLSLTSWAGHDDPK 50
           +D GNFVL+D +  K    LW+SF +PTDT L+ M MG        N  L SW   DDP 
Sbjct: 131 LDYGNFVLRDSKNNKPSGFLWQSFDFPTDTLLSDMKMGWDNKSGGFNRILRSWKTTDDPS 190

Query: 51  PGNFTFKM-DQGENQYQITKPLIRHWRSAESKDVFSSNEIIPYQILNLLSNFSHSVKPTG 109
            G+F+ K+   G  ++ I       +RS      +  N       +  +    +S     
Sbjct: 191 SGDFSTKLRTSGFPEFYIYNKESITYRSGP----WLGNRFSSVPGMKPVDYIDNSFTENN 246

Query: 110 KNAVHPNLIVPSIDYSRTRLIMNYTGEIQ--YWTEDKVKGWSLIWREPRDNCSVFHYCGN 167
           +  V+   +  +  YS   L ++ TG +Q   W E   + W  +W  P+D C  +  CGN
Sbjct: 247 QQVVYSYRVNKTNIYSI--LSLSSTGLLQRLTWME-AAQSWKQLWYSPKDLCDNYKECGN 303

Query: 168 FGICNSNHKRKCQCLQGFVPSSPERWSSEDFLGGCIRKTAL-CGGKDMFLKRQITKVGET 226
           +G C++N    C C++GF P + +    +D +G C+RKT L C G+D F++ +  ++ +T
Sbjct: 304 YGYCDANTSPICNCIKGFEPMNEQAALRDDSVG-CVRKTKLSCDGRDGFVRLKKMRLPDT 362

Query: 227 D--SCLPVASEAECSKKCRGFCPCTAYSYKESKRRDEAGTCCIWIEELKDLREDFSNGGH 284
              S        EC ++C   C CTA++   +  R+    C IW   L D+R +++ GG 
Sbjct: 363 TETSVDKGIGLKECEERCLKGCNCTAFA--NTDIRNGGSGCVIWSGGLFDIR-NYAKGGQ 419

Query: 285 ELYIRVAATDLESAENKTEGGSTQQVEAFNGRKKHQWTLIFGMTIASGIIL--SCIIIYF 342
           +LY+RVAA DLE    K++                    I G +I   I+L  S II +F
Sbjct: 420 DLYVRVAAGDLEDKRIKSKK-------------------IIGSSIGVSILLLLSFIIFHF 460

Query: 343 YTRRKRINSQGRSINRPNMAAPFYESARH----VKDMVVDSDQF--KEEEKQGIDLPFID 396
           + R+     Q RSI    +  P  +  R     + ++V  S  +  KE +   ++LP ++
Sbjct: 461 WKRK-----QKRSIT---IQTPIVDLVRSQDSLMNELVKASRSYTSKENKTDYLELPLME 512

Query: 397 FESILAATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEI---- 452
           ++++  AT+NFS  NKLG+GGFG VYK     G++IAVKRLS  S QG +EF NE+    
Sbjct: 513 WKALAMATNNFSTDNKLGQGGFGIVYKGMLLDGKEIAVKRLSKMSSQGTDEFMNEVRLIA 572

Query: 453 --ETSNSNATIGANV----KAFVRE-MKTFS------DPTLSALLHWEMRFNIIIGIARG 499
             +  N    +G  V    K  + E ++  S      D T S+ L+W+ RF+II GIARG
Sbjct: 573 KLQHINLVRLLGCCVDKGEKMLIYEYLENLSLDSHLFDQTRSSNLNWQKRFDIINGIARG 632

Query: 500 LLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           LLYLHQDSR RIIHRDLK SN+LLD+ M PKISDFG+A
Sbjct: 633 LLYLHQDSRCRIIHRDLKASNVLLDKNMTPKISDFGMA 670

Involved in the regulation of cellular expansion and differentiation.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9ZT07|RKS1_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 OS=Arabidopsis thaliana GN=RKS1 PE=2 SV=3

 Score =  283 bits (725), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 202/572 (35%), Positives = 287/572 (50%), Gaps = 70/572 (12%)

Query: 2   DSGNFVLQDDQVRKNLWESFKYPTDTFLAGMYMG------ENLSLTSWAGHDDPKPGNFT 55
           D GN VL D    ++ WESF +PTDTFL  M +G       + SLTSW  H DP  G+  
Sbjct: 125 DLGNLVLFDPVTGRSFWESFDHPTDTFLPFMRLGFTRKDGLDRSLTSWKSHGDPGSGDLI 184

Query: 56  FKMDQ-GENQYQITKPLIRHWRSAE-SKDVFSSNEIIP--YQILNLLSNFSHSVKPTGKN 111
            +M++ G  Q  + K +   WR    +   +S    +P  Y   N   N    V  T   
Sbjct: 185 LRMERRGFPQLILYKGVTPWWRMGSWTGHRWSGVPEMPIGYIFNNSFVNNEDEVSFT-YG 243

Query: 112 AVHPNLIVPSIDYSRTRLIMNYTGEIQYWTE-DKVKGWSLIWREPRDNCSVFHYCGNFGI 170
               ++I        TR ++N TG +  +T   + K W+  W  P++ C  + +CG  G 
Sbjct: 244 VTDASVI--------TRTMVNETGTMHRFTWIARDKRWNDFWSVPKEQCDNYAHCGPNGY 295

Query: 171 CNSNHKR--KCQCLQGFVPSSPERWSSEDFLGGCIRK--TALCGGKDMFLKRQITKVGET 226
           C+S   +  +C CL GF P  P  W   D  GGC +K   ++C  KD F+K +  K+ +T
Sbjct: 296 CDSPSSKTFECTCLPGFEPKFPRHWFLRDSSGGCTKKKRASICSEKDGFVKLKRMKIPDT 355

Query: 227 -DSCLPV-ASEAECSKKCRGFCPCTAYS--YKESKRRDEAGTCCIWIEELKDLREDFSNG 282
            D+ + +  +  EC ++C   C C AY+  Y ESKR   A  C  W   + D R  + N 
Sbjct: 356 SDASVDMNITLKECKQRCLKNCSCVAYASAYHESKR--GAIGCLKWHGGMLDART-YLNS 412

Query: 283 GHELYIRVAATDLESAENKTEGGSTQQVEAFNGRKKHQWTLIFGMTIASGIILSCIIIYF 342
           G + YIRV   +L                  NG    +  L+  +++ + ++L  +I++ 
Sbjct: 413 GQDFYIRVDKEELARWNR-------------NGLSGKRRVLLILISLIAAVMLLTVILFC 459

Query: 343 YTRRKRINSQGRSINRPNMAAPFYESARHVKDMVVDSDQFKEEEKQGIDLPFIDFESILA 402
             R +R +++ RS +      PF            +S +F++++ +  +LP  D  +I+A
Sbjct: 460 VVRERRKSNRHRSSSANFAPVPFDFD---------ESFRFEQDKARNRELPLFDLNTIVA 510

Query: 403 ATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEI------ETSN 456
           AT+NFS  NKLG GGFGPVYK       +IAVKRLS  SGQG+EEFKNE+      +  N
Sbjct: 511 ATNNFSSQNKLGAGGFGPVYKGVLQNRMEIAVKRLSRNSGQGMEEFKNEVKLISKLQHRN 570

Query: 457 SNATIGANVKAFVREMKTFSDPTLS-----------ALLHWEMRFNIIIGIARGLLYLHQ 505
               +G  V+   + +     P  S           A L W  R  I+ GIARG+LYLHQ
Sbjct: 571 LVRILGCCVELEEKMLVYEYLPNKSLDYFIFHEEQRAELDWPKRMEIVRGIARGILYLHQ 630

Query: 506 DSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           DSRLRIIHRDLK SNILLD EM PKISDFG+A
Sbjct: 631 DSRLRIIHRDLKASNILLDSEMIPKISDFGMA 662

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SXB8|Y1133_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 OS=Arabidopsis thaliana GN=At1g11330 PE=1 SV=3

 Score =  278 bits (712), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 202/585 (34%), Positives = 282/585 (48%), Gaps = 98/585 (16%)

Query: 1   MDSGNFVLQDDQVRKN---LWESFKYPTDTFLAGMYMGE------NLSLTSWAGHDDPKP 51
           MDSGN +LQD+  R N   LWESFK+P D+F+  M +G       NL LTSW  HDDP  
Sbjct: 137 MDSGNLMLQDN--RNNGEILWESFKHPYDSFMPRMTLGTDGRTGGNLKLTSWTSHDDPST 194

Query: 52  GNFTFKMDQGE-NQYQITKPLIRHWRSAESKDVFSSNEIIPY--QILNLLSNFSHSVKPT 108
           GN+T  +      +  I K  +  WRS             P+  Q+   L N    +   
Sbjct: 195 GNYTAGIAPFTFPELLIWKNNVPTWRSG------------PWNGQVFIGLPNMDSLLFLD 242

Query: 109 GKNAVHPNLIVPSIDYSRTRLIMNYTGE---IQY---WTEDKVKGWSLIWREPRDNCSVF 162
           G N    N    S+ Y+    + ++  +   I Y   W+   ++ W +  + P  +C  +
Sbjct: 243 GFNLNSDNQGTISMSYANDSFMYHFNLDPEGIIYQKDWST-SMRTWRIGVKFPYTDCDAY 301

Query: 163 HYCGNFGICNSNHKRKCQCLQGFVPSSPERWSSEDFLGGCIRKTAL-------------C 209
             CG FG C++     C+C++GFVP +   W+  ++  GC+RK  L              
Sbjct: 302 GRCGRFGSCHAGENPPCKCVKGFVPKNNTEWNGGNWSNGCMRKAPLQCERQRNVSNGGGG 361

Query: 210 GGKDMFLKRQITKVGETDSCLPVASEAECSKKCRGFCPCTAYSYKESKRRDEAGTCCIWI 269
           G  D FLK Q  KV    +    ASE  C K C   C CTAY+Y      D    C +W 
Sbjct: 362 GKADGFLKLQKMKV-PISAERSEASEQVCPKVCLDNCSCTAYAY------DRGIGCMLWS 414

Query: 270 EELKDLREDFSNGGHELYIRVAATDLESAENKTEGGSTQQVEAFNGRKKHQWTLIFGMTI 329
            +L D+ + F   G +L+IRVA ++L++  N                      +I    I
Sbjct: 415 GDLVDM-QSFLGSGIDLFIRVAHSELKTHSNLA-------------------VMIAAPVI 454

Query: 330 ASGIILSCIIIYFYTRRKRINSQGRSINRPNMAAPFYESARHVKDMVVDSDQFKEEEKQG 389
              +I +  ++    + K+  +  +  +   M   F        D    S+Q K +E   
Sbjct: 455 GVMLIAAVCVLLACRKYKKRPAPAKDRSAELM---FKRMEALTSDNESASNQIKLKE--- 508

Query: 390 IDLPFIDFESILAATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFK 449
             LP  +F+ +  +TD+FS  NKLG+GGFGPVYK K P GQ+IAVKRLS  SGQGLEE  
Sbjct: 509 --LPLFEFQVLATSTDSFSLRNKLGQGGFGPVYKGKLPEGQEIAVKRLSRKSGQGLEELM 566

Query: 450 NEI------ETSNSNATIGANVKAFVREM-----------KTFSDPTLSALLHWEMRFNI 492
           NE+      +  N    +G  ++   R +               DP    +L W+ RFNI
Sbjct: 567 NEVVVISKLQHRNLVKLLGCCIEGEERMLVYEYMPKKSLDAYLFDPMKQKILDWKTRFNI 626

Query: 493 IIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           + GI RGLLYLH+DSRL+IIHRDLK SNILLD+ +NPKISDFGLA
Sbjct: 627 MEGICRGLLYLHRDSRLKIIHRDLKASNILLDENLNPKISDFGLA 671

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O64781|Y1639_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g61390 OS=Arabidopsis thaliana GN=At1g61390 PE=2 SV=1

 Score =  273 bits (699), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 193/583 (33%), Positives = 287/583 (49%), Gaps = 103/583 (17%)

Query: 1   MDSGNFVLQDDQVRKNLWESFK------YPTDTFLAGMYMGENLSLTSWAGHDDPKPGNF 54
           +D+GN V+ DD   K LW+SF+       P  + +  +  G+N  LTSW  + DP PG F
Sbjct: 142 LDTGNLVVIDDVSGKTLWKSFENLGNTMLPQSSVMYDIPRGKNRVLTSWRSNSDPSPGEF 201

Query: 55  TFKMD-QGENQYQITKPLIRHWRSAE-SKDVFS------SNEIIPYQILNLLS----NFS 102
           T +   Q   Q  I +    +WRS   +K  FS      ++ + P+ +L  ++    +FS
Sbjct: 202 TLEFTPQVPPQGLIRRGSSPYWRSGPWAKTRFSGIPGIDASYVSPFTVLQDVAKGTASFS 261

Query: 103 HSVKPTGKNAVHPNLIVPSIDYSRTRLIMNYTGEIQYWTEDKVKGWSLIWREPRDNCSVF 162
           +S+                 +Y  + + +   G+++    D  K W L +  P  +C ++
Sbjct: 262 YSMLR---------------NYKLSYVTLTSEGKMKILWNDG-KSWKLHFEAPTSSCDLY 305

Query: 163 HYCGNFGICNSNHKRKCQCLQGFVPSSPERWSSEDFLGGCIRKTAL---------CGGKD 213
             CG FG+C  +   KC CL+GFVP S + W   ++  GC+R+T L           GK+
Sbjct: 306 RACGPFGLCVRSRNPKCICLKGFVPKSDDEWKKGNWTSGCVRRTQLSCHTNSSTKTQGKE 365

Query: 214 MFLKRQITKVGETD--SCLPVASEAECSKKCRGFCPCTAYSYKESKRRDEAGTCCIWIEE 271
                 +T+V   D        +  +C + C G C CTA++Y           C +W  E
Sbjct: 366 TDSFYHMTRVKTPDLYQLAGFLNAEQCYQDCLGNCSCTAFAYISGI------GCLVWNRE 419

Query: 272 LKDLREDFSNGGHELYIRVAATDLESAENKTEGGSTQQVEAFNGRKKHQWTLIFGMTIAS 331
           L D  + F + G  L +R+A+++L +  N+T+                   +I G T++ 
Sbjct: 420 LVDTVQ-FLSDGESLSLRLASSEL-AGSNRTK-------------------IILGTTVSL 458

Query: 332 GIILSCIIIYFYTRRKRINSQGRSINRPNMAAPFYESARHVKDMVVDSDQFKEEEKQGID 391
            I +  +   + + R R        N PN            KDM       + ++  G++
Sbjct: 459 SIFVILVFAAYKSWRYRTKQ-----NEPNPMFIHSSQDAWAKDM-------EPQDVSGVN 506

Query: 392 LPFIDFESILAATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNE 451
           L   D  +I  AT+NFS +NKLG+GGFGPVYK K   G++IAVKRLSS+SGQG +EF NE
Sbjct: 507 L--FDMHTIRTATNNFSSSNKLGQGGFGPVYKGKLVDGKEIAVKRLSSSSGQGTDEFMNE 564

Query: 452 I------ETSNSNATIGANVKA----------FVREMKTFS-DPTLSALLHWEMRFNIII 494
           I      +  N    +G  +K             + +  F  D TL   + W+ RFNII 
Sbjct: 565 IRLISKLQHKNLVRLLGCCIKGEEKLLIYEYLVNKSLDVFLFDSTLKFEIDWQKRFNIIQ 624

Query: 495 GIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           G+ARGLLYLH+DSRLR+IHRDLK SNILLD++M PKISDFGLA
Sbjct: 625 GVARGLLYLHRDSRLRVIHRDLKVSNILLDEKMIPKISDFGLA 667

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SY89|Y1661_ARATH Putative G-type lectin S-receptor-like serine/threonine-protein kinase At1g61610 OS=Arabidopsis thaliana GN=At1g61610 PE=2 SV=1

 Score =  271 bits (694), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 199/593 (33%), Positives = 283/593 (47%), Gaps = 86/593 (14%)

Query: 3   SGNFVL-QDDQVRKNLWESFKYPTDTFLAGMY------MGENLSLTSWAGHDDPKPGNFT 55
           +G+ VL  D   RK  WESF  PTDTFL GM       +GEN +   W    DP PG ++
Sbjct: 132 TGDLVLCSDSDRRKWYWESFNNPTDTFLPGMRVRVNPSLGENRAFIPWKSESDPSPGKYS 191

Query: 56  FKMDQ-GENQYQITKPLIRHWRSAESKDVFSSNEIIPYQILNLLSNFSHSVKPTGKNAVH 114
             +D  G  +  I +   R WRS        +      +  N +  F  S  P    +V+
Sbjct: 192 MGIDPVGALEIVIWEGEKRKWRSGPWNSAIFTGIPDMLRFTNYIYGFKLSSPPDRDGSVY 251

Query: 115 PNLIVP-SIDYSRTRLIMNYTGEIQYWTEDKVKGWSLIWREPRDNCSVFHYCGNFGICNS 173
              +   S D+ R  +  +   E   W +D ++ W+L+  +P   C  ++ CGN+ +C+ 
Sbjct: 252 FTYVASDSSDFLRFWIRPDGVEEQFRWNKD-IRNWNLLQWKPSTECEKYNRCGNYSVCDD 310

Query: 174 NHK---RKCQCLQGFVPSSPERWSSEDFLGGCIRKTAL-------CGGKDMFLKRQITKV 223
           + +    KC C+ GF P   ++W++ DF GGC R+  L        G +D F   +  KV
Sbjct: 311 SKEFDSGKCSCIDGFEPVHQDQWNNRDFSGGCQRRVPLNCNQSLVAGQEDGFTVLKGIKV 370

Query: 224 GETDSCLPVASEAECSKKCRGFCPCTAYSYKESKRRDEAGTCCIWIEELKDLREDFSNGG 283
            +  S +   +   C   C   C C AY+            C IW  +L D+ E F  GG
Sbjct: 371 PDFGSVVLHNNSETCKDVCARDCSCKAYALVVGI------GCMIWTRDLIDM-EHFERGG 423

Query: 284 HELYIRVAATDLESA-ENKTEGGSTQQVEAFNGRKKHQWTLIFGMTIASGIILSCIIIY- 341
           + + IR+A + L    EN T                  W ++F + I + ++  CI I  
Sbjct: 424 NSINIRLAGSKLGGGKENST-----------------LWIIVFSV-IGAFLLGLCIWILW 465

Query: 342 --------FYTRRKRINSQGRSINRPNMAAPFYESARHVKDMVVDSDQFKEEEKQGIDLP 393
                   F  ++K I       NR   ++P       +K +V D       +    DLP
Sbjct: 466 KFKKSLKAFLWKKKDITVSDIIENRDYSSSP-------IKVLVGD-------QVDTPDLP 511

Query: 394 FIDFESILAATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEI- 452
              F+S+ +AT +F+E NKLG+GGFG VYK  F  G++IAVKRLS  S QGLEEFKNEI 
Sbjct: 512 IFSFDSVASATGDFAEENKLGQGGFGTVYKGNFSEGREIAVKRLSGKSKQGLEEFKNEIL 571

Query: 453 -----ETSNSNATIGA----NVKAFVREM-------KTFSDPTLSALLHWEMRFNIIIGI 496
                +  N    +G     N K  + E        +   D +    L W  R+ +I GI
Sbjct: 572 LIAKLQHRNLVRLLGCCIEDNEKMLLYEYMPNKSLDRFLFDESKQGSLDWRKRWEVIGGI 631

Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASS 549
           ARGLLYLH+DSRL+IIHRDLK SNILLD EMNPKISDFG+A     ++ HA++
Sbjct: 632 ARGLLYLHRDSRLKIIHRDLKASNILLDTEMNPKISDFGMARIFNYRQDHANT 684

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	626
224146691	865	predicted protein [Populus trichocarpa]	0.837	0.605	0.476	1e-143
255563425	1553	serine-threonine protein kinase, plant-t	0.782	0.315	0.504	1e-137
224146694	810	predicted protein [Populus trichocarpa]	0.817	0.632	0.477	1e-133
224124690	853	predicted protein [Populus trichocarpa]	0.833	0.611	0.454	1e-128
297809813	852	S-locus lectin protein kinase family pro	0.829	0.609	0.459	1e-125
322510091	852	RecName: Full=G-type lectin S-receptor-l	0.829	0.609	0.459	1e-124
171191094	859	putative lectin receptor kinase-like pro	0.829	0.604	0.423	1e-111
255547267	779	S-locus-specific glycoprotein S6 precurs	0.931	0.748	0.362	1e-99
356542109	891	PREDICTED: G-type lectin S-receptor-like	0.854	0.600	0.387	3e-95
356542111	836	PREDICTED: G-type lectin S-receptor-like	0.801	0.600	0.402	2e-93

>gi|224146691|ref|XP_002326100.1| predicted protein [Populus trichocarpa] gi|222862975|gb|EEF00482.1| predicted protein [Populus trichocarpa]

 Score =  514 bits (1324), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 269/565 (47%), Positives = 369/565 (65%), Gaps = 41/565 (7%)

Query: 1   MDSGNFVLQDDQ--VRKNLWESFKYPTDTFLAGMYMGENLSLTSWAGHDDPKPGNFTFKM 58
           +DSGN V  D    +  +LW+SF++PTDTFL+GM M  +L L SW  H DPK GNFTF++
Sbjct: 131 LDSGNLVFGDSNTLLTTSLWQSFEHPTDTFLSGMKMSAHLKLISWRSHLDPKEGNFTFQL 190

Query: 59  DQGENQYQITKPLIRHWRSAESKDVFSSNEIIPYQILNLLSNFSHSVKPTGKNAVHPNLI 118
           D+  NQ+ I+   I+HW S ES D F S+E +P  I+  LSNF+ S K    +++     
Sbjct: 191 DEERNQFVISDGSIKHWTSGESSD-FLSSERMPDGIVYFLSNFTRSFKSISASSLTSKFK 249

Query: 119 VPSI---DYSRTRLIMNYTGEIQYWTEDKVKGWSLIWREPRDNCSVFHYCGNFGICNSNH 175
            P++   DY+ TR+ +++ GE+QYW+ +    WS +W EPRD CSVF+ CGNFG CN  +
Sbjct: 250 GPNLSTSDYNNTRIRLDFEGELQYWSYNT--NWSKLWWEPRDKCSVFNACGNFGSCNLYN 307

Query: 176 KRKCQCLQGFVPSSPERWSSEDFLGGCIRKTALCGGKDMFLKRQITKVGETDSCLPVASE 235
              C+CL G+ P+S E W+  DF GGCIR +A+CG  D FL  ++ +VG+ D+   V  E
Sbjct: 308 SLACRCLPGYEPNSQENWTKGDFSGGCIRSSAVCGKHDTFLSLKMMRVGQQDTKFVVKDE 367

Query: 236 AECSKKCRGFCPCTAYSYKESK----RRDEAGTCCIWIEELKDLREDFSNGGHELYIRVA 291
            +C ++C   C C A+S+ + +    R+  + +C IW++ LKDL+ED+S+GG +L++RV 
Sbjct: 368 KQCREECFRTCRCQAHSFVKGRVNRDRQPSSNSCLIWMDHLKDLQEDYSDGGLDLFVRVT 427

Query: 292 ATDLESAENKTEGGSTQQVEAFNGRKKHQWTLIFGMTIASGIILSCIIIYF--YTRRKRI 349
             D+        GGS+        RKK   +LI G+TIA  I+LS I +Y   + R+K  
Sbjct: 428 IADIVQEVKFGTGGSS--------RKKKPLSLIVGVTIACVIVLSSIFLYICIFMRKKSK 479

Query: 350 NSQGRSINRPNMAAPFYESARHVKDMVVDSDQFKEEEKQGIDLPFIDFESILAATDNFSE 409
             + +  N    AA  Y + + VK+++ D+++F EE+K+GID+PF D +SILAATD FSE
Sbjct: 480 RRESQQ-NTERNAALLYGTEKRVKNLI-DAEEFNEEDKKGIDVPFFDLDSILAATDYFSE 537

Query: 410 ANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEI------ETSNSNATIGA 463
           ANKLG+GGFGPVYK KFPGGQ+IA+KRLSS SGQGLEEFKNE+      +  N    +G 
Sbjct: 538 ANKLGRGGFGPVYKGKFPGGQEIAIKRLSSVSGQGLEEFKNEVILIARLQHRNLVRLVGY 597

Query: 464 NVKAFV----------REMKTF-SDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRII 512
            +K             + + +F  D  L  LL+WEMRF+II+G+ARGLLYLHQDSRLRII
Sbjct: 598 CIKGEEKILLYEYMPNKSLDSFIFDRDLGMLLNWEMRFDIILGVARGLLYLHQDSRLRII 657

Query: 513 HRDLKTSNILLDQEMNPKISDFGLA 537
           HRD+KTSNILLD EMNPKISDFGLA
Sbjct: 658 HRDMKTSNILLDAEMNPKISDFGLA 682

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255563425|ref|XP_002522715.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223538065|gb|EEF39677.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis]

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 276/547 (50%), Positives = 349/547 (63%), Gaps = 57/547 (10%)

Query: 2   DSGNFVLQDDQVRKNLWESFKYPTDTFLAGMYMGENLSLTSWAGHDDPKPGNFTFKMDQG 61
           DSGN VL + Q+ +  W+SF++PTDTFL GM M +NL LTSW    DP PG FTFK+ Q 
Sbjct: 132 DSGNLVLSN-QLARTTWQSFEHPTDTFLPGMRMDQNLMLTSWTSKIDPAPGQFTFKLHQK 190

Query: 62  E-NQYQITKPLIRHWRSAESKDVFSSNEIIPYQILNLLSNFSHSVKPTGKNAVHPNLIVP 120
           E NQ+ I    I HW S  S + F S E IP+ + + L N +        N  H      
Sbjct: 191 EKNQFTIWNHFIPHWISGISGEFFES-EKIPHDVAHFLLNLN-------INKGH------ 236

Query: 121 SIDYSRTRLIMNYTGEIQYWTEDKVKG-WSLIWREPRDNCSVFHYCGNFGICNSNHKRKC 179
           S DY+  R++M+++GEIQ W  D  +  WSL W EP+D CSV+  CG+FG CNSN+K  C
Sbjct: 237 SSDYNSIRVVMSFSGEIQSWNLDMYQHEWSLEWWEPKDRCSVYEACGSFGSCNSNNKLLC 296

Query: 180 QCLQGFVPSSPERWSSEDFLGGCIRKTALCGGKDMFLKRQITKVGETDSCLPVASEAECS 239
           +CL GF P   E+W+ EDF  GC + +  C   D+FL  ++ KV  TDS   V +E EC 
Sbjct: 297 KCLPGFKPKIQEKWNMEDFSDGCTKNSTACDKDDIFLNLKMMKVYNTDSKFDVKNETECR 356

Query: 240 KKCRGFCPCTAYSY---KESKRRDEA---GTCCIWIEELKDLREDFSNGGHELYIRVAAT 293
            KC   C C AYSY   K S RRD      TC IW E+LK+L+E++  GGH+L++RV+ +
Sbjct: 357 DKCLSSCQCHAYSYTGGKNSTRRDIGPTNSTCWIWTEDLKNLQEEYLYGGHDLFVRVSRS 416

Query: 294 DLESAENKTEGGSTQQVEAFNGRKKHQWTLIFGMTIASGIILSCIIIYF---YTRRKRIN 350
           D+        G ST++   F         LI G+TIAS I+L C I Y      +RK+  
Sbjct: 417 DI--------GSSTRKKPLF---------LIIGVTIASVIVLLCAIAYICICICKRKK-- 457

Query: 351 SQGRSINRPNMAAPFYESARHVKDMVVDSDQFKEEEKQGIDLPFIDFESILAATDNFSEA 410
              RS N    AA  Y + + VKDM+ +S+ FKEE+K+GID+PF D +SILAATDNFS+ 
Sbjct: 458 --ERSKNIERNAAILYGTEKRVKDMI-ESEDFKEEDKKGIDIPFFDLDSILAATDNFSDV 514

Query: 411 NKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVKAFVR 470
           NKLG+GGFGPVYK  FPGG++IA+KRLSS SGQGLEEFKNE+        + A ++   R
Sbjct: 515 NKLGRGGFGPVYKGIFPGGREIAIKRLSSVSGQGLEEFKNEV-------VLIARLQH--R 565

Query: 471 EMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPK 530
            +    D  LS LL WEMRF+II+G+ARGLLYLHQDSRLRIIHRDLKTSNILLD EMNPK
Sbjct: 566 NLVRLLDQKLSILLKWEMRFDIILGVARGLLYLHQDSRLRIIHRDLKTSNILLDAEMNPK 625

Query: 531 ISDFGLA 537
           ISDFGLA
Sbjct: 626 ISDFGLA 632

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224146694|ref|XP_002326101.1| predicted protein [Populus trichocarpa] gi|222862976|gb|EEF00483.1| predicted protein [Populus trichocarpa]

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 270/565 (47%), Positives = 350/565 (61%), Gaps = 53/565 (9%)

Query: 1   MDSGNFVLQDDQVRKN--LWESFKYPTDTFLAGMYMGENLSLTSWAGHDDPKPGNFTFKM 58
           +DSGN V  D        LW+SF++PTDTFL+GM M  NL LTSW    DPK GNFTF++
Sbjct: 132 LDSGNLVFGDSNTLSTTILWQSFEHPTDTFLSGMKMSGNLKLTSWKSQVDPKEGNFTFQL 191

Query: 59  DQGENQYQITKPLIRHWRSAESKDVFSSNEIIPYQILNLLSNFSHSVKPT-GKNAVHPNL 117
           D  +NQ+ I    ++HW S ES D FSS E +P  I+  LSNF+ SV  + G+       
Sbjct: 192 DGEKNQFVIVNDYVKHWTSGESSDFFSS-ERMPDGIVYFLSNFTRSVPNSKGRRTTRS-- 248

Query: 118 IVPSIDYSRTRLIMNYTGEIQYWTEDKVKGWSLIWREPRDNCSVFHYCGNFGICNSNHKR 177
             PS DY+ TR+ ++  GE+QYW  D    WSL W EPRD C+VF+ CG+FG CN  +  
Sbjct: 249 --PS-DYNNTRIRLDVKGELQYWNFDVYTNWSLQWFEPRDKCNVFNACGSFGSCNLYNML 305

Query: 178 KCQCLQGFVPSSPERWSSEDFLGGCIRKTALCGGKDMFLKRQITKVGETDSCLPVASEAE 237
            C+CL GF P S E W +EDF GGCIR   +C   D FL  +  +VG+ D       E +
Sbjct: 306 ACRCLPGFEPISQENWRNEDFSGGCIRSAPVCK-NDTFLSLKNMRVGQPDIKYEAEDEKQ 364

Query: 238 CSKKCRGFCPCTAYSYKE---SKRRDEA---GTCCIWIEELKDLREDFSNGGHELYIRVA 291
           C + C   C C AYS+ +   + RRD      TC +W+++LKDL+E++S  G +L++RV 
Sbjct: 365 CREGCLDKCQCQAYSFVKWEINMRRDRQPGHNTCLMWMDDLKDLQEEYSYDGPDLFVRVP 424

Query: 292 ATDLESAENKTEGGSTQQVEAFNGRKKHQWTLIFGMTIASGIILSCIIIY--FYTRRKRI 349
             ++        GG +        RKK   +LI G+TIAS I+LS I +Y   + R+K  
Sbjct: 425 IAEI--------GGYS--------RKKKPLSLIVGVTIASVIVLSSIFLYTCIFMRKKAK 468

Query: 350 NSQGRSINRPNMAAPFYESARHVKDMVVDSDQFKEEEKQGIDLPFIDFESILAATDNFSE 409
             + +  N    AA  Y + + VK+++ D+++F EE+K+GID+P  D +SILAATD FSE
Sbjct: 469 RRESQQ-NTERNAALLYGTEKRVKNLI-DAEEFNEEDKKGIDVPLFDLDSILAATDYFSE 526

Query: 410 ANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEI------ETSNSNATIGA 463
           ANKLG+GGFGPVYK KFPGGQ+IA+KRLSS SGQGLEEFKNE+      +  N    +G 
Sbjct: 527 ANKLGRGGFGPVYKGKFPGGQEIAIKRLSSVSGQGLEEFKNEVILIARLQHRNLVRLVGY 586

Query: 464 NVKA-----FVREMKTFS------DPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRII 512
            +K          M   S      D  L  LL WEMR +II+G+ARGLLYLHQDSRLRII
Sbjct: 587 CIKGDEKILLYEYMPNKSLDSFIFDRDLGMLLDWEMRLDIILGVARGLLYLHQDSRLRII 646

Query: 513 HRDLKTSNILLDQEMNPKISDFGLA 537
           HRD+KTSNILLD EMNPKISDFGLA
Sbjct: 647 HRDMKTSNILLDAEMNPKISDFGLA 671

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224124690|ref|XP_002319396.1| predicted protein [Populus trichocarpa] gi|222857772|gb|EEE95319.1| predicted protein [Populus trichocarpa]

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 259/570 (45%), Positives = 360/570 (63%), Gaps = 48/570 (8%)

Query: 1   MDSGNFVLQDDQVRKNL----WESFKYPTDTFLAGMYMGENLSLTSWAGHDDPKPGNFTF 56
           MD+GN V+ D+   K+L    W+SF+ PT+TFL GM + E+++L SW  +DDP  GNF+F
Sbjct: 128 MDTGNLVVSDEDDEKHLTGILWQSFENPTETFLPGMKLDEDMALISWKSYDDPASGNFSF 187

Query: 57  KMDQGENQYQITKPLIRHWRSAESKDVFSSNEIIPYQILNLLSNFSHSVKPTGKNAVHPN 116
            +D+  NQ+ I K  IR+WRS  S +  SS   +P  I   LSNF+ +   + +N   P 
Sbjct: 188 HLDREANQFVIWKRSIRYWRSGVSDNGGSSRSEMPSAISYFLSNFTST---SVRNDSVP- 243

Query: 117 LIVPSIDYSRTRLIMNYTGEIQYWTEDKVKGWSLIWREPRDNCSVFHYCGNFGICNSNHK 176
             + S  Y+ TR++M++ G+IQY   +  K WS+IW +PR  CS+++ CGNFG CNSN++
Sbjct: 244 -YITSSLYTNTRMVMSFAGQIQYLQLNTEKTWSVIWAQPRTRCSLYNACGNFGSCNSNNE 302

Query: 177 RKCQCLQGFVPSSPERWSSEDFLGGCIRKTALCGGK---DMFLKRQITKVGETDSCLPVA 233
             C+CL GF P SPE W+S D   GC R++ LC      D FL  ++ KV   D+     
Sbjct: 303 VVCKCLPGFQPVSPEYWNSGDNSRGCTRRSPLCSNSATSDTFLSLKMMKVANPDAQFKAN 362

Query: 234 SEAECSKKCRGFCPCTAYSYKESKR----RDEAGTCCIWIEELKDLREDFSNGGHELYIR 289
           SE EC  +C   C C A+SY+E++       E+ TC IW ++L+D++E++ +GG +L++R
Sbjct: 363 SEVECKMECLNNCQCEAFSYEEAETTKGGESESATCWIWTDDLRDIQEEY-DGGRDLHVR 421

Query: 290 VAATDLESAENKTEGGSTQQVEAFNGRKKHQWTLIFGMTIASGI---ILSCIIIYFYTRR 346
           V+ +D+    ++ + GS+          K   +LI  + + S I   +LS  I++   +R
Sbjct: 422 VSVSDIAGHYSEKKDGSSI--------GKIPLSLIIAVALISLIALAVLSSTIVFICLQR 473

Query: 347 KRINS--QGRSINRPNMAAPFYESARHVKDMVVDSDQFKEEEKQGIDLPFIDFESILAAT 404
           +R+    + + I   N+   F  S R VKD++ DSD+F E+E + ID+P  D ES+LAAT
Sbjct: 474 RRMPKLRENKGIFPRNLGFHFNGSERLVKDLI-DSDRFNEDETKAIDVPCFDLESLLAAT 532

Query: 405 DNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEI------ETSNSN 458
           DNFS ANKLG+GGFGPVYKA FPGG++IAVKRLSS SGQGLEEFKNE+      +  N  
Sbjct: 533 DNFSNANKLGQGGFGPVYKATFPGGEKIAVKRLSSGSGQGLEEFKNEVVLIAKLQHRNLV 592

Query: 459 ATIGANV----KAFVRE------MKTFS-DPTLSALLHWEMRFNIIIGIARGLLYLHQDS 507
             +G  V    K  + E      + +F  D  L   L WEMR+N+IIGIARGLLYLHQDS
Sbjct: 593 RLLGYCVEGDEKMLLYEYMPNKSLDSFLFDRKLCVSLDWEMRYNVIIGIARGLLYLHQDS 652

Query: 508 RLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           RLRIIHRDLK+SNILLD+EMNPKISDFGLA
Sbjct: 653 RLRIIHRDLKSSNILLDEEMNPKISDFGLA 682

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297809813|ref|XP_002872790.1| S-locus lectin protein kinase family protein [Arabidopsis lyrata subsp. lyrata] gi|297318627|gb|EFH49049.1| S-locus lectin protein kinase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 259/564 (45%), Positives = 339/564 (60%), Gaps = 45/564 (7%)

Query: 1   MDSGNFVLQDDQVRKNL-WESFKYPTDTFLAGMYMGENLSLTSWAGHDDPKPGNFTFKMD 59
           MD+GN VL  D    N+ W+SF+ PTDTFL GM M EN++L+SW   +DP PGNFTF+MD
Sbjct: 134 MDNGNLVLMRDGDEANVVWQSFQNPTDTFLPGMMMNENMTLSSWRSFNDPSPGNFTFQMD 193

Query: 60  QGEN-QYQITKPLIRHWRSAESKDVFSSNEIIPYQILNLLSNFSHSVKPTGKNAVHPNLI 118
           Q E+ Q+ I K  +R+W+S  S     S+E+ PY I   LSNF+ +V  T  NA  P L 
Sbjct: 194 QEEDKQFIIWKRSMRYWKSGISGKFIGSDEM-PYAISYFLSNFTETV--TVHNASVPPLF 250

Query: 119 VPSIDYSRTRLIMNYTGEIQYWTEDKVKGWSLIWREPRDNCSVFHYCGNFGICNSNHKRK 178
                Y+ TR  M+ +G+ QY+  D  + W+ IW EPRD CSV++ CGNFG CNS ++  
Sbjct: 251 TSL--YTNTRFTMSSSGQAQYFRLDGERFWAQIWAEPRDECSVYNACGNFGSCNSKNEEM 308

Query: 179 CQCLQGFVPSSPERWSSEDFLGGCIRKTALCGGK-----DMFLKRQITKVGETDSCLPVA 233
           C+CL GF P+  E+W   DF GGC R++ +CG       DMFL   + +VG  DS     
Sbjct: 309 CKCLPGFRPNFLEKWVKGDFSGGCSRESRICGKDGVVVGDMFLNLTVVEVGSPDSQFDAH 368

Query: 234 SEAECSKKCRGFCPCTAYSYKESKRRDEAGTCCIWIEELKDLREDFSNGGHELYIRVAAT 293
           +E +C  +C   C C AYSY+E         C IW+E+L +L+E +  G   ++IRVA  
Sbjct: 369 NEKDCRAECLNNCQCQAYSYEEVDTLQSNTKCWIWLEDLNNLKEGYL-GSRNVFIRVAVP 427

Query: 294 DLESAENKTEGGSTQQVEAFNGRKKHQWTLIFGMTIASG---IILSCIIIYFYTRRKRIN 350
           D+ S   +  G   +         K    LI  +T  S    ++LS    Y Y +R+++N
Sbjct: 428 DIGSHAERARGRYRE--------AKTPVVLIIVVTFTSAAILVVLSSTSSYVYLQRRKVN 479

Query: 351 SQGRSINRPNMAAPFYESARHVKDMVVDSDQFKEEEKQGIDLPFIDFESILAATDNFSEA 410
            +  SI R        +S RH+KD++ +S +FK+++ QGID+P  + E+IL AT NFS A
Sbjct: 480 KELGSIPR---GVNLCDSERHIKDLI-ESGRFKQDDSQGIDVPSFELETILYATSNFSNA 535

Query: 411 NKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEI------ETSNSNATIGAN 464
           NKLG+GGFGPVYK  FPG Q+IAVKRLS  SGQGLEEFKNE+      +  N    +G  
Sbjct: 536 NKLGQGGFGPVYKGMFPGDQEIAVKRLSRCSGQGLEEFKNEVVLIAKLQHRNLVRLLGYC 595

Query: 465 V----KAFVREMKTFS-------DPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIH 513
           V    K  + E            D  L   L W+ R NII+GIARGLLYLHQDSRLRIIH
Sbjct: 596 VAGEEKLLLYEYMPHKSLDFFIFDRKLCQRLDWKTRCNIILGIARGLLYLHQDSRLRIIH 655

Query: 514 RDLKTSNILLDQEMNPKISDFGLA 537
           RDLKTSNILLD+EMNPKISDFGLA
Sbjct: 656 RDLKTSNILLDEEMNPKISDFGLA 679

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|322510091|sp|Q9ZR08.3|Y4230_ARATH RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230; Flags: Precursor gi|4262151|gb|AAD14451.1| putative receptor kinase [Arabidopsis thaliana] gi|7270193|emb|CAB77808.1| putative receptor kinase [Arabidopsis thaliana]

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 259/564 (45%), Positives = 339/564 (60%), Gaps = 45/564 (7%)

Query: 1   MDSGNFVLQDDQVRKNL-WESFKYPTDTFLAGMYMGENLSLTSWAGHDDPKPGNFTFKMD 59
           MD+GN VL  D    N+ W+SF+ PTDTFL GM M EN++L+SW   +DP  GNFTF+MD
Sbjct: 134 MDNGNLVLISDGNEANVVWQSFQNPTDTFLPGMRMDENMTLSSWRSFNDPSHGNFTFQMD 193

Query: 60  QGEN-QYQITKPLIRHWRSAESKDVFSSNEIIPYQILNLLSNFSHSVKPTGKNAVHPNLI 118
           Q E+ Q+ I K  +R+W+S  S     S+E+ PY I   LSNF+ +V  T  NA  P L 
Sbjct: 194 QEEDKQFIIWKRSMRYWKSGISGKFIGSDEM-PYAISYFLSNFTETV--TVHNASVPPLF 250

Query: 119 VPSIDYSRTRLIMNYTGEIQYWTEDKVKGWSLIWREPRDNCSVFHYCGNFGICNSNHKRK 178
                Y+ TR  M+ +G+ QY+  D  + W+ IW EPRD CSV++ CGNFG CNS ++  
Sbjct: 251 TSL--YTNTRFTMSSSGQAQYFRLDGERFWAQIWAEPRDECSVYNACGNFGSCNSKNEEM 308

Query: 179 CQCLQGFVPSSPERWSSEDFLGGCIRKTALCGGK-----DMFLKRQITKVGETDSCLPVA 233
           C+CL GF P+  E+W   DF GGC R++ +CG       DMFL   + +VG  DS     
Sbjct: 309 CKCLPGFRPNFLEKWVKGDFSGGCSRESRICGKDGVVVGDMFLNLSVVEVGSPDSQFDAH 368

Query: 234 SEAECSKKCRGFCPCTAYSYKESKRRDEAGTCCIWIEELKDLREDFSNGGHELYIRVAAT 293
           +E EC  +C   C C AYSY+E         C IW+E+L +L+E +  G   ++IRVA  
Sbjct: 369 NEKECRAECLNNCQCQAYSYEEVDILQSNTKCWIWLEDLNNLKEGYL-GSRNVFIRVAVP 427

Query: 294 DLESAENKTEGGSTQQVEAFNGRKKHQWTLIFGMTIASG---IILSCIIIYFYTRRKRIN 350
           D+ S   +  G          G  K    LI  +T  S    ++LS    Y + +R+++N
Sbjct: 428 DIGSHVERGRGRY--------GEAKTPVVLIIVVTFTSAAILVVLSSTASYVFLQRRKVN 479

Query: 351 SQGRSINRPNMAAPFYESARHVKDMVVDSDQFKEEEKQGIDLPFIDFESILAATDNFSEA 410
            +  SI R        +S RH+K+++ +S +FK+++ QGID+P  + E+IL AT NFS A
Sbjct: 480 KELGSIPR---GVHLCDSERHIKELI-ESGRFKQDDSQGIDVPSFELETILYATSNFSNA 535

Query: 411 NKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEI------ETSNSNATIGAN 464
           NKLG+GGFGPVYK  FPG Q+IAVKRLS  SGQGLEEFKNE+      +  N    +G  
Sbjct: 536 NKLGQGGFGPVYKGMFPGDQEIAVKRLSRCSGQGLEEFKNEVVLIAKLQHRNLVRLLGYC 595

Query: 465 V----KAFVREMKTFS-------DPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIH 513
           V    K  + E            D  L   L W+MR NII+GIARGLLYLHQDSRLRIIH
Sbjct: 596 VAGEEKLLLYEYMPHKSLDFFIFDRKLCQRLDWKMRCNIILGIARGLLYLHQDSRLRIIH 655

Query: 514 RDLKTSNILLDQEMNPKISDFGLA 537
           RDLKTSNILLD+EMNPKISDFGLA
Sbjct: 656 RDLKTSNILLDEEMNPKISDFGLA 679

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|171191094|gb|ACB45099.1| putative lectin receptor kinase-like protein [Citrus limon]

 Score =  409 bits (1052), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 240/567 (42%), Positives = 324/567 (57%), Gaps = 48/567 (8%)

Query: 1   MDSGNFVLQDDQVRKNL-WESFKYPTDTFLAGMYMGENLSLTSWAGHDDPKPGNFTFKMD 59
           MD+GN VL  D    N+ W+SF+ PTDTFL GM M EN++L+SW   +DP  GNFTF+MD
Sbjct: 134 MDNGNLVLISDGNEANVVWQSFQNPTDTFLPGMRMDENMTLSSWRSFNDPSHGNFTFQMD 193

Query: 60  QGEN-QYQITKPLIRHWRSAESKDVFSSNEIIPYQILNLLSNFSHSVKPTGKNAVHPNLI 118
           Q E+ Q+ I K  +R+W+S  S     S+E+ PY I   LSNF+ +V  T  NA  P L 
Sbjct: 194 QEEDKQFIIWKRSMRYWKSGISGKFIGSDEM-PYAISYFLSNFTETV--TVHNASVPPLF 250

Query: 119 VPSIDYSRTRLIMNYTGEIQYWTEDKVKGWSLIWREPRDNCSVFHYCGNFGICNSNHKRK 178
                Y+ TR  M+ +G+ QY+  D  + W+ IW EPRD CSV++ CGNFG CNS ++  
Sbjct: 251 TSL--YTNTRFTMSSSGQAQYFRLDGERFWAQIWAEPRDECSVYNACGNFGSCNSKNEEM 308

Query: 179 CQCLQGFVPSSPERWSSEDFLGGCIRKTALCGGK-----DMFLKRQITKVGETDSCLPVA 233
           C+CL GF P+  E+W   DF GGC R++ + G       DMFL   + +VG  DS     
Sbjct: 309 CKCLPGFRPNFLEKWVKGDFSGGCSRESRISGKDGVVVGDMFLNLSVVEVGSPDSQFDAH 368

Query: 234 SEAECSKKCRGFCPCTAYSYKESKRRDEAGTCCIWIEELKDLREDFSNGGHELYIRVAAT 293
           +E EC  +C   C C AYSY+E         C IW+E+L +L+E +  G   ++IRVA  
Sbjct: 369 NEKECRAECLNNCQCQAYSYEEVDILQSNTKCWIWLEDLNNLKEGYL-GSRNVFIRVAVP 427

Query: 294 DLESAENKTEGGSTQQVEAFNGRKKHQWTLIFGMTIASG---IILSCIIIYFYTRRKRIN 350
           D+ S   +  G          G  K    LI  +T  S    ++LS    Y + +R+++N
Sbjct: 428 DIGSHVERGRGRY--------GEAKTPVVLIIVVTFTSAAILVVLSSTASYVFLQRRKVN 479

Query: 351 SQGRSINRPNMAAPFYESARHVKDMVVDSDQFKEEEKQGIDLPFIDFESILAATDNFSEA 410
            +  SI R        +S RH+K+++ +S +FK+++ QGID+P  + E+IL AT NFS A
Sbjct: 480 KELGSIPR---GVHLCDSERHIKELI-ESGRFKQDDSQGIDVPSFELETILYATSNFSNA 535

Query: 411 NKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEI------ETSNSNATIGAN 464
           NKLG+GGFGPVYK  FPG Q+IAVKRLS  SGQGLEEFKNE+      +  N    +G  
Sbjct: 536 NKLGQGGFGPVYKGMFPGDQEIAVKRLSRCSGQGLEEFKNEVVLIAKLQHRNLVRLLGYC 595

Query: 465 VKAFVREMKTFS---------DPTL-----SALLHWEMRFNIIIGIARGLLYLHQDSRLR 510
           V    +  +            D  L     S  L W+ R+ I +G ARGL YLH+  R  
Sbjct: 596 VAGDEKTSRLLVYDFMPNGSLDSHLFTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDC 655

Query: 511 IIHRDLKTSNILLDQEMNPKISDFGLA 537
           IIH D+K  NILLD E  PK+SDFGLA
Sbjct: 656 IIHCDIKPENILLDAEFCPKVSDFGLA 682

Source: Citrus limon

Species: Citrus limon

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255547267|ref|XP_002514691.1| S-locus-specific glycoprotein S6 precursor, putative [Ricinus communis] gi|223546295|gb|EEF47797.1| S-locus-specific glycoprotein S6 precursor, putative [Ricinus communis]

 Score =  370 bits (951), Expect = e-99,   Method: Compositional matrix adjust.
 Identities = 248/685 (36%), Positives = 341/685 (49%), Gaps = 102/685 (14%)

Query: 1   MDSGNFVLQD-DQVRKNLWESFKYPTDTFLAGMYM------GENLSLTSWAGHDDPKPGN 53
           +  GN VL+D +   + LW+SF +PTDT L    +      GE+  L SW  ++DP PG 
Sbjct: 131 LQKGNLVLRDGNNSSEPLWQSFDHPTDTILPDGRLAFNKLNGESTRLISWRSNEDPAPGL 190

Query: 54  FTFKMDQGENQYQI--TKPLIRHWRSAESKDVFSSNEIIPYQILNLLSNFSHSVKPTGKN 111
           FT +MD   NQY I   K  I     A    +FSS   +P   L+ + NF++ V    +N
Sbjct: 191 FTVEMDPDGNQYYILWNKSKIMWTSGAWDGQIFSS---VPEMRLSYIFNFTY-VSNDYEN 246

Query: 112 AVHPNLIVPSIDYSRTRLIMNYTGEIQY--WTEDKVKGWSLIWREPRDNCSVFHYCGNFG 169
               +L   SI    +R++++  G+IQ   W E   + WS+ W +PR  C V+ +CG F 
Sbjct: 247 YFTYSLYNNSI---LSRILISVGGQIQQQSWLEPSNE-WSVFWSQPRLQCEVYAFCGAFA 302

Query: 170 ICNSNHKRKCQCLQGFVPSSPERWSSEDFLGGCIRKTAL-CG------GK-DMFLKRQIT 221
            C    +  C CL+GF P S + W+S D+  GC+RKT+L CG      GK D FL  +  
Sbjct: 303 SCGETDQPLCYCLEGFRPKSVDAWNSGDYSAGCVRKTSLQCGNSSRADGKSDRFLASRGI 362

Query: 222 KVGETDSCLPVASEAECSKKCRGFCPCTAYSYKESKRRDEAGTCCIWIEELKDLRE--DF 279
           ++      LP      C   C   C CTAY+Y  S   +    C IW  +L ++R+  D 
Sbjct: 363 ELPVNSRTLPARDAQVCETTCLNNCLCTAYAYSGSG--NNGINCSIWYGDLLNIRQLADE 420

Query: 280 SNGGHELYIRVAATDLESAENKTEGGSTQQVEAFNGRKKHQWTLIFGMTIASGIILSCII 339
            + G  LY+R+A ++  S+ NK+       V                      ++  C+ 
Sbjct: 421 DSNGKTLYVRIADSEFSSSNNKSRKVIGVVVGL---------------GSVVILVFLCMA 465

Query: 340 IYFYTRRKRINSQGRSINRPNMAAPFYESARHVKDMVVDSDQFKEEEKQGIDLPFIDFES 399
           ++   RR RI  Q              E    + D +  S       +  + L    F+S
Sbjct: 466 LFLIQRRMRIEKQD-------------EVLGSIPD-ITSSTTADGGGQNNVQLVIFSFKS 511

Query: 400 ILAATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETSNS-- 457
           IL AT+NFS+ NKLG GGFGPVYK  FPG Q+ A+KRLS  SGQG EEF NE++   +  
Sbjct: 512 ILVATENFSQENKLGAGGFGPVYKGNFPGDQEAAIKRLSRQSGQGSEEFMNELKLIANLQ 571

Query: 458 --------NATIGANVKAFVREM-------KTFSDPTLSALLHWEMRFNIIIGIARGLLY 502
                      +    K  V E        K   DP+    L W  R NI  G+A+GLLY
Sbjct: 572 HKYLVRLLGCCVEREEKILVYEYMANRSLDKFLYDPSERVKLVWNKRLNIAEGVAQGLLY 631

Query: 503 LHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA------------------------L 538
           +H+ SRL++IHRDLK SNILLD+ MNPKISDFG+A                         
Sbjct: 632 IHKFSRLKVIHRDLKASNILLDEAMNPKISDFGMARIFGINQTEANTNRAWELRKEGKEA 691

Query: 539 DMMDQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAFV 598
           +++D  +  +  P E +KCI+VGLLCVQEDP DRPTMS VV+ML S+   L TPK PAF+
Sbjct: 692 ELIDASIRHTCNPKEAVKCIHVGLLCVQEDPIDRPTMSLVVLMLSSDTQTLPTPKEPAFL 751

Query: 599 IRRGSSSSASSSNKPESNNELTNTL 623
            RR    S    ++  SNNELT +L
Sbjct: 752 RRRAVEFSTQGPDE-YSNNELTISL 775

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356542109|ref|XP_003539513.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230-like [Glycine max]

 Score =  355 bits (912), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 240/619 (38%), Positives = 324/619 (52%), Gaps = 84/619 (13%)

Query: 1   MDSGNFVLQDDQV-RKNL-WESFKYPTDTFLAGMYMGENLSLTSWAGHDDPKPGNFTFKM 58
           ++SGN VL DD + R N  W+SF++PTDTFL GM M  +++L SW    DP PGNFTF M
Sbjct: 132 LESGNLVLMDDNLGRSNYTWQSFQHPTDTFLPGMKMDASVALISWRNSTDPAPGNFTFTM 191

Query: 59  --DQGENQYQITKPLIRHWRSAE-SKDVFSSNEIIPYQILNLLSNFSHSVKPTGKNAVHP 115
             +     + + K    +W   E  +DV S        + NLL N   + + TG +    
Sbjct: 192 APEDERGSFAVQKLSQIYWDLDELDRDVNSQ------VVSNLLGN--TTTRGTGSHNFSD 243

Query: 116 NLIVPS--IDYSRTRLIMNYTGEIQY--WTEDKVKGWSLIWREPRDNCSVFHYCGNFGIC 171
             I  S   +Y ++RL+MN +GE+Q+  W ED+ + W   W  P D C +  YCG+FGIC
Sbjct: 244 KTIFTSKPYNYKKSRLLMNSSGELQFLKWDEDEGQ-WEKHWWGPADECDIHDYCGSFGIC 302

Query: 172 NSNHKRKCQCLQGFVPSSPERWSSEDFLGGCIRKTALCGGKDM-FLKRQITKVGETDSCL 230
           N N+   C+CL GF P  PE+   E    GC+RK+  C   D+ FL     KVG  D  +
Sbjct: 303 NRNNHIGCKCLPGFAP-IPEQSEGELQGHGCVRKSTSCINTDVTFLNLTNIKVGNADHEI 361

Query: 231 PVASEAECSKKCRGFCP-CTAYSYKESKRRDEAG-TCCIWIEELKDLREDFSNGGHELYI 288
              +EAEC   C   CP C AYSY  S   D +  TC IW + L  L E++   G +L I
Sbjct: 362 FTETEAECQSFCISKCPLCQAYSYNRSTYSDRSPFTCNIWTQNLSYLVEEYDR-GRDLSI 420

Query: 289 RVAATDLESAENKTEGGSTQQV------------EAFNGRKKHQWTLIFGMTIASGIILS 336
            V  +D+       E   T ++              +N     + T      +  GI   
Sbjct: 421 LVKRSDIAPTAKTCEPCGTYEIPYPLSTGPNCGDSMYNKFNCTKSTGQVNFMMPEGISYQ 480

Query: 337 CIIIYFYTRRKRINSQGRSINRPN----------------------------MAAPFYES 368
              I   TR + +    R+ N P                             +    YES
Sbjct: 481 VTRIEEDTRTRAVK---RAFNPPTDIDSYSNSWFHGYSGMHNSICAYRASTQIQESLYES 537

Query: 369 ARHVKDMVVDSDQFKEEEKQGIDLPFIDFESILAATDNFSEANKLGKGGFGPVYKAKFPG 428
            + VK + +     +E++ +GI++P   F SILAATDNF+++NKLG+GG+GPVYK  FPG
Sbjct: 538 EKRVKGL-IGLGSLEEKDIEGIEVPCYTFASILAATDNFTDSNKLGRGGYGPVYKGTFPG 596

Query: 429 GQQIAVKRLSSASGQGLEEFKNEI----ETSNSNAT------IGANVKAFVRE------M 472
           GQ IAVKRLSS S QGLEEFKNE+    +  + N        I  + K  + E      +
Sbjct: 597 GQDIAVKRLSSVSTQGLEEFKNEVILIAKLQHRNLVRLRGYCIKGDEKILLYEYMPNKSL 656

Query: 473 KTFS-DPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKI 531
            +F  D T + LL W +RF II+GIARG+LYLHQDSRLR+IHRDLKTSNILLD+EMNPKI
Sbjct: 657 DSFIFDRTRTLLLDWPIRFEIIVGIARGMLYLHQDSRLRVIHRDLKTSNILLDEEMNPKI 716

Query: 532 SDFGLALDMMDQKLHASSK 550
           SDFGLA     ++  AS++
Sbjct: 717 SDFGLAKIFGGKETEASTE 735

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356542111|ref|XP_003539514.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230-like [Glycine max]

 Score =  349 bits (896), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 230/572 (40%), Positives = 308/572 (53%), Gaps = 70/572 (12%)

Query: 1   MDSGNFVLQDDQVRKN--LWESFKYPTDTFLAGMYMGENLSLTSWAGHDDPKPGNFTFKM 58
           ++SGN VL DD + ++   W+SF++PTDTFL GM M  +++L SW    DP PGNFTF M
Sbjct: 132 LESGNLVLMDDNLGRSNYTWQSFQHPTDTFLPGMKMDASVALISWRNSTDPAPGNFTFTM 191

Query: 59  --DQGENQYQITKPLIRHWRSAE-SKDVFSSNEIIPYQILNLLSNFSHSVKPTGKNAVHP 115
             +     + + K    +W   E  +DV S        + NLL N +     +   +   
Sbjct: 192 VPEDERGSFAVQKLSQIYWDLDELDRDVNSQ------VVSNLLGNTTTRGTRSHNFSNKT 245

Query: 116 NLIVPSIDYSRTRLIMNYTGEIQY--WTEDKVKGWSLIWREPRDNCSVFHYCGNFGICNS 173
                  +Y ++RL+MN +GE+Q+  W ED+ + W   W  P D C +   CG+FGICN 
Sbjct: 246 VYTSKPYNYKKSRLLMNSSGELQFLKWDEDEGQ-WEKRWWGPADECDIHDSCGSFGICNR 304

Query: 174 NHKRKCQCLQGFVPSSPERWSSEDFLGGCIRKTALCGGKDM-FLKRQITKVGETDSCLPV 232
           N+   C+CL GF P  PE    E    GC+RK+  C   D+ FL     KVG  D  +  
Sbjct: 305 NNHIGCKCLPGFAP-IPE---GELQGHGCVRKSTSCINTDVTFLNLTNIKVGNPDHEIFT 360

Query: 233 ASEAECSKKCRGFCP-CTAYSYKESKRRDEAG-TCCIWIEELKDLREDFSNGGHELYIRV 290
            +EAEC   C   CP C AYSY  S   D +  TC IW + L  L E++   G +L I V
Sbjct: 361 ETEAECQSFCISKCPLCQAYSYHTSTYGDRSPFTCNIWTQNLSSLVEEYDR-GRDLSILV 419

Query: 291 AATDLESAENKTEGGSTQQVEAFNGRKKHQWTLIFGMTIASGIILSCIIIYFYTRRKRIN 350
             +D+       E   T ++          + L  G      +         Y +     
Sbjct: 420 KRSDIAPTAKTCEPCGTYEIP---------YPLSTGPNCGDPM---------YNKFNCTK 461

Query: 351 SQGRSINRPNMAAP--------FYESARHVKDMVVDSDQFKEEEKQGIDLPFIDFESILA 402
           S G+     N   P         YES R VK + +     +E++ +GI++P   + SILA
Sbjct: 462 STGQV----NFMTPKGISYQESLYESERQVKGL-IGLGSLEEKDIEGIEVPCYTYASILA 516

Query: 403 ATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEI----ETSNSN 458
           ATDNFS++NKLG+GG+GPVYK  FPGGQ IAVKRLSS S QGLEEFKNE+    +  + N
Sbjct: 517 ATDNFSDSNKLGRGGYGPVYKGTFPGGQDIAVKRLSSVSTQGLEEFKNEVILIAKLQHRN 576

Query: 459 AT------IGANVKAFVRE------MKTFS-DPTLSALLHWEMRFNIIIGIARGLLYLHQ 505
                   I  + K  + E      + +F  DPT ++LL W +RF II+GIARG+LYLHQ
Sbjct: 577 LVRLRGYCIEGDEKILLYEYMPNKSLDSFIFDPTRTSLLDWPIRFEIIVGIARGMLYLHQ 636

Query: 506 DSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           DSRLR+IHRDLKTSNILLD+EMNPKISDFGLA
Sbjct: 637 DSRLRVIHRDLKTSNILLDEEMNPKISDFGLA 668

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	626
TAIR|locus:2141181	850	RK3 "receptor kinase 3" [Arabi	0.463	0.341	0.338	2.1e-93
TAIR|locus:2018546	843	RK1 "receptor kinase 1" [Arabi	0.458	0.340	0.346	6.8e-89
TAIR|locus:2018506	847	RK2 "receptor kinase 2" [Arabi	0.463	0.342	0.327	4.7e-80
TAIR|locus:2141176	849	B120 [Arabidopsis thaliana (ta	0.445	0.328	0.321	7.5e-79
TAIR|locus:2131694	815	AT4G27300 [Arabidopsis thalian	0.439	0.337	0.300	1.6e-77
TAIR|locus:2197704	831	AT1G61390 [Arabidopsis thalian	0.474	0.357	0.306	2.1e-74
TAIR|locus:2197734	814	AT1G61370 [Arabidopsis thalian	0.461	0.355	0.312	4.9e-74
TAIR|locus:2197729	805	SD1-29 "S-domain-1 29" [Arabid	0.479	0.372	0.285	6.7e-73
TAIR|locus:2197664	804	AT1G61490 [Arabidopsis thalian	0.474	0.369	0.320	7.4e-72
TAIR|locus:2200888	804	AT1G61500 [Arabidopsis thalian	0.455	0.354	0.298	8.7e-72

TAIR|locus:2141181 RK3 "receptor kinase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 437 (158.9 bits), Expect = 2.1e-93, Sum P(4) = 2.1e-93
 Identities = 108/319 (33%), Positives = 169/319 (52%)

Query:     1 MDSGNFVLQDDQVRKN---LWESFKYPTDTFLAGMYMGE------NLSLTSWAGHDDPKP 51
             +D+GNFVL+D +       LW+SF +PTDT L  M +G       N  + SW   DDP  
Sbjct:   133 LDNGNFVLRDSKNSAPDGVLWQSFDFPTDTLLPEMKLGWDAKTGFNRFIRSWKSPDDPSS 192

Query:    52 GNFTFKMD-QGENQYQITKPLIRHWRSAESKDV-FSS-NEIIPYQILNLLSNFSHSVKPT 108
             G+F+FK++ +G  +  +     R +RS     + FS   E+ P++ +  + NF+     T
Sbjct:   193 GDFSFKLETEGFPEIFLWNRESRMYRSGPWNGIRFSGVPEMQPFEYM--VFNFT-----T 245

Query:   109 GKNAVHPNLIVPSID-YSRTRLIMNYTGEIQYWTE-DKVKGWSLIWREPRDNCSVFHYCG 166
              K  V  +  +   D YSR  L ++ +G +Q +T  +  + W+  W  P+D C  +  CG
Sbjct:   246 SKEEVTYSFRITKSDVYSR--LSISSSGLLQRFTWIETAQNWNQFWYAPKDQCDEYKECG 303

Query:   167 NFGICNSNHKRKCQCLQGFVPSSPERWSSEDFLGGCIRKTAL-CGGKDMFLKRQITKVGE 225
              +G C+SN    C C++GF P +P+ W   D   GC+RKT L CGG D F++ +  K+ +
Sbjct:   304 VYGYCDSNTSPVCNCIKGFKPRNPQVWGLRDGSDGCVRKTLLSCGGGDGFVRLKKMKLPD 363

Query:   226 TDSCLPVASEA--ECSKKCRGFCPCTAYSYKESKRRDEAGTCCIWIEELKDLREDFSNGG 283
             T +          EC +KC   C CTA++  +   R     C  W  EL D+R +++ GG
Sbjct:   364 TTTASVDRGIGVKECEQKCLRDCNCTAFANTDI--RGSGSGCVTWTGELFDIR-NYAKGG 420

Query:   284 HELYIRVAATDLESAENKT 302
              +LY+R+AATDLE   N++
Sbjct:   421 QDLYVRLAATDLEDKRNRS 439

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0004675 "transmembrane receptor protein serine/threonine kinase activity" evidence=ISS

GO:0005773 "vacuole" evidence=IDA

GO:0031625 "ubiquitin protein ligase binding" evidence=IPI

GO:0009506 "plasmodesma" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=RCA

TAIR|locus:2018546 RK1 "receptor kinase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 422 (153.6 bits), Expect = 6.8e-89, Sum P(4) = 6.8e-89
 Identities = 111/320 (34%), Positives = 166/320 (51%)

Query:     1 MDSGNFVLQDDQVRKNLWESFKYPTDTFLAGMYMGE------NLSLTSWAGHDDPKPGNF 54
             +D+GNF+L+D   R  LW+SF +PTDT LA M +G       N  L SW   DDP  G F
Sbjct:   131 LDNGNFLLRDSNNRL-LWQSFDFPTDTLLAEMKLGWDQKTGFNRILRSWKTTDDPSSGEF 189

Query:    55 TFKMDQGE--NQYQITKPLIRHWRSAESKDV-FSSNEIIP--YQILNLLSNFSHSVKPTG 109
             + K++  E    Y  +K  I + RS     + FSS   +P   Q+  ++ NF+ S +   
Sbjct:   190 STKLETSEFPEFYICSKESILY-RSGPWNGMRFSS---VPGTIQVDYMVYNFTASKE--- 242

Query:   110 KNAVHPNLIVPSIDYSRTRLIMNYTGEIQY--WTEDKVKGWSLIWREPRDNCSVFHYCGN 167
                 +   I  +  YSR  L +N  G +Q   W E   + W  +W  P+D C  +  CGN
Sbjct:   243 -EVTYSYRINKTNLYSR--LYLNSAGLLQRLTWFET-TQSWKQLWYSPKDLCDNYKVCGN 298

Query:   168 FGICNSNHKRKCQCLQGFVPSSPERWSSEDFLGGCIRKTAL-CGGKDMFLKRQITKVGET 226
             FG C+SN    C C++GF P + + W   D   GC+RKT L C G+D F + +  K+ +T
Sbjct:   299 FGYCDSNSLPNCYCIKGFKPVNEQAWDLRDGSAGCMRKTRLSCDGRDGFTRLKRMKLPDT 358

Query:   227 DSCLPVASEAE---CSKKCRGFCPCTAYSYKESKRRDEAGTCCIWIEELKDLREDFSNGG 283
              + + V  E     C ++C   C CTA++  +   R+    C IW  E+ D+R +++ GG
Sbjct:   359 TATI-VDREIGLKVCKERCLEDCNCTAFANADI--RNGGSGCVIWTREILDMR-NYAKGG 414

Query:   284 HELYIRVAATDLESAENKTE 303
              +LY+R+AA +LE    K E
Sbjct:   415 QDLYVRLAAAELEDKRIKNE 434

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;IDA

GO:0009875 "pollen-pistil interaction" evidence=TAS

GO:0016020 "membrane" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0019199 "transmembrane receptor protein kinase activity" evidence=ISS

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

TAIR|locus:2018506 RK2 "receptor kinase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 381 (139.2 bits), Expect = 4.7e-80, Sum P(4) = 4.7e-80
 Identities = 105/321 (32%), Positives = 164/321 (51%)

Query:     1 MDSGNFVLQDDQVRKN---LWESFKYPTDTFLAGMYMG-ENLS------LTSWAGHDDPK 50
             +D GNFVL+D +  K    LW+SF +PTDT L+ M MG +N S      L SW   DDP 
Sbjct:   131 LDYGNFVLRDSKNNKPSGFLWQSFDFPTDTLLSDMKMGWDNKSGGFNRILRSWKTTDDPS 190

Query:    51 PGNFTFKM-DQGENQYQI-TKPLIRHWRSAESKDVFSSNEIIPYQILNLLSNFSHSVKPT 108
              G+F+ K+   G  ++ I  K  I +       + FSS   +P   +  +    +S    
Sbjct:   191 SGDFSTKLRTSGFPEFYIYNKESITYRSGPWLGNRFSS---VPG--MKPVDYIDNSFTEN 245

Query:   109 GKNAVHPNLIVPSIDYSRTRLIMNYTGEIQY--WTEDKVKGWSLIWREPRDNCSVFHYCG 166
              +  V+   +  +  YS   L ++ TG +Q   W E   + W  +W  P+D C  +  CG
Sbjct:   246 NQQVVYSYRVNKTNIYSI--LSLSSTGLLQRLTWME-AAQSWKQLWYSPKDLCDNYKECG 302

Query:   167 NFGICNSNHKRKCQCLQGFVPSSPERWSSEDFLGGCIRKTAL-CGGKDMFL---KRQITK 222
             N+G C++N    C C++GF P + +    +D +G C+RKT L C G+D F+   K ++  
Sbjct:   303 NYGYCDANTSPICNCIKGFEPMNEQAALRDDSVG-CVRKTKLSCDGRDGFVRLKKMRLPD 361

Query:   223 VGETDSCLPVASEAECSKKCRGFCPCTAYSYKESKRRDEAGTCCIWIEELKDLREDFSNG 282
               ET     +  + EC ++C   C CTA++  +   R+    C IW   L D+R +++ G
Sbjct:   362 TTETSVDKGIGLK-ECEERCLKGCNCTAFANTDI--RNGGSGCVIWSGGLFDIR-NYAKG 417

Query:   283 GHELYIRVAATDLESAENKTE 303
             G +LY+RVAA DLE    K++
Sbjct:   418 GQDLYVRVAAGDLEDKRIKSK 438

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;IDA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0031625 "ubiquitin protein ligase binding" evidence=IPI

GO:0034613 "cellular protein localization" evidence=IGI

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0004675 "transmembrane receptor protein serine/threonine kinase activity" evidence=ISS

TAIR|locus:2141176 B120 [Arabidopsis thaliana (taxid:3702)]

 Score = 349 (127.9 bits), Expect = 7.5e-79, Sum P(4) = 7.5e-79
 Identities = 104/323 (32%), Positives = 154/323 (47%)

Query:     2 DSGNFVLQDDQVRKNLWESFKYPTDTFLAGMYM------GENLSLTSWAGHDDPKPGNFT 55
             D+GNFVL +    + +WESF +PTDTFL  M +      G+N +  SW    DP PGN++
Sbjct:   134 DTGNFVLSETDTDRPIWESFNHPTDTFLPQMRVRVNPQTGDNHAFVSWRSETDPSPGNYS 193

Query:    56 FKMD-QGENQYQITKP-LIRHWRSAE-SKDVFSSNEIIPYQIL--NLLSNFSHSVKPTGK 110
               +D  G  +  + +    R WRS + +  +F+    IP   L  N L  F  S  P   
Sbjct:   194 LGVDPSGAPEIVLWEGNKTRKWRSGQWNSAIFTG---IPNMSLLTNYLYGFKLSSPPDET 250

Query:   111 NAVHPNLIV--PSIDYSRTRLIMNYTGEIQYWTEDKVKGWSLIWREPRDNCSVFHYCGNF 168
              +V+   +   PS+   R +++ N T E   W E  +K W+    EP   C  ++ CG F
Sbjct:   251 GSVYFTYVPSDPSV-LLRFKVLYNGTEEELRWNET-LKKWTKFQSEPDSECDQYNRCGKF 308

Query:   169 GICNSNHKRK-CQCLQGFVPSSPERWSSEDFLGGCIRKTAL-CG-----GKDMFLKRQIT 221
             GIC+       C C+ G+   S   WS      GC R+T L C      G+D FL  +  
Sbjct:   309 GICDMKGSNGICSCIHGYEQVSVGNWSR-----GCRRRTPLKCERNISVGEDEFLTLKSV 363

Query:   222 KVGETDSCLP---VASEAECSKKCRGFCPCTAYSYKESKRRDEAGTCCIWIEELKDLRED 278
             K+ + +  +P   +    +C ++C   C C AYS          G C IW ++L DL++ 
Sbjct:   364 KLPDFE--IPEHNLVDPEDCRERCLRNCSCNAYSLVGG-----IG-CMIWNQDLVDLQQ- 414

Query:   279 FSNGGHELYIRVAATDLESAENK 301
             F  GG  L+IR+A  D E  EN+
Sbjct:   415 FEAGGSSLHIRLA--DSEVGENR 435

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0006979 "response to oxidative stress" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2131694 AT4G27300 [Arabidopsis thaliana (taxid:3702)]

 Score = 344 (126.2 bits), Expect = 1.6e-77, Sum P(4) = 1.6e-77
 Identities = 96/319 (30%), Positives = 147/319 (46%)

Query:     3 SGNFVLQDDQVRKNLWESFKYPTDTFLAGMYMGENL------SLTSWAGHDDPKPGNFTF 56
             SGN +  D +    LW+SF YP +T LAGM +G+N       SL+SW    DP PG+FT 
Sbjct:   134 SGNLISSDGE-EAVLWQSFDYPMNTILAGMKLGKNFKTQMEWSLSSWKTLKDPSPGDFTL 192

Query:    57 KMD-QGENQYQITKP-------LIRHWRSAE---SKDVFSSNEIIPYQILNLLSNFSHSV 105
              +D +G  Q  + K         +  W       +  +   N +  Y+  +     ++S 
Sbjct:   193 SLDTRGLPQLILRKNGDSSYSYRLGSWNGLSFTGAPAMGRENSLFDYKFTSSAQEVNYSW 252

Query:   106 KPTGKNAVHPNLIVPSIDYSRTRLIMNYTGEIQYWTEDKVKGWSLIWREPRDNCSVFHYC 165
              P  +       IV       +RL++N TG++  + + K   W L    P D C  +  C
Sbjct:   253 TPRHR-------IV-------SRLVLNNTGKLHRFIQSKQNQWILANTAPEDECDYYSIC 298

Query:   166 GNFGICNSNHKR--KCQCLQGFVPSSPERWSSEDFLGGCIRKTAL-CGGKDMFLKRQITK 222
             G + +C  N K    C CLQGF P S  +W+      GC+ +    C  KD F+K    K
Sbjct:   299 GAYAVCGINSKNTPSCSCLQGFKPKSGRKWNISRGAYGCVHEIPTNCEKKDAFVKFPGLK 358

Query:   223 VGETD-SCLPVASEA---ECSKKCRGFCPCTAYSYKESKRRDEAGT-CCIWIEELKDLRE 277
             + +T  S     +E    +C  KC   C CTAY+  + +   E G  C +W  +L D+RE
Sbjct:   359 LPDTSWSWYDAKNEMTLEDCKIKCSSNCSCTAYANTDIR---EGGKGCLLWFGDLVDMRE 415

Query:   278 DFSNGGHELYIRVAATDLE 296
              +S+ G ++YIR+    +E
Sbjct:   416 -YSSFGQDVYIRMGFAKIE 433

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

GO:0031625 "ubiquitin protein ligase binding" evidence=IPI

GO:0009506 "plasmodesma" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=RCA

TAIR|locus:2197704 AT1G61390 [Arabidopsis thaliana (taxid:3702)]

 Score = 334 (122.6 bits), Expect = 2.1e-74, Sum P(4) = 2.1e-74
 Identities = 103/336 (30%), Positives = 164/336 (48%)

Query:     1 MDSGNFVLQDDQVRKNLWESFKYPTDTFL---AGMY---MGENLSLTSWAGHDDPKPGNF 54
             +D+GN V+ DD   K LW+SF+   +T L   + MY    G+N  LTSW  + DP PG F
Sbjct:   142 LDTGNLVVIDDVSGKTLWKSFENLGNTMLPQSSVMYDIPRGKNRVLTSWRSNSDPSPGEF 201

Query:    55 TFKMD-QGENQYQITKPLIRHWRSAE-SKDVFSSNEIIPYQILNLLSNFSHSVKPTGKNA 112
             T +   Q   Q  I +    +WRS   +K  FS    IP    + +S F+  ++   K  
Sbjct:   202 TLEFTPQVPPQGLIRRGSSPYWRSGPWAKTRFSG---IPGIDASYVSPFT-VLQDVAKGT 257

Query:   113 VHPNLIVPSIDYSRTRLIMNYTGEIQY-WTEDKVKGWSLIWREPRDNCSVFHYCGNFGIC 171
                +  +   +Y  + + +   G+++  W + K   W L +  P  +C ++  CG FG+C
Sbjct:   258 ASFSYSMLR-NYKLSYVTLTSEGKMKILWNDGK--SWKLHFEAPTSSCDLYRACGPFGLC 314

Query:   172 NSNHKRKCQCLQGFVPSSPERWSSEDFLGGCIRKTAL-CG--------GKDMFLKRQITK 222
               +   KC CL+GFVP S + W   ++  GC+R+T L C         GK+      +T+
Sbjct:   315 VRSRNPKCICLKGFVPKSDDEWKKGNWTSGCVRRTQLSCHTNSSTKTQGKETDSFYHMTR 374

Query:   223 VGETDSCLPVAS--EAE-CSKKCRGFCPCTAYSYKESKRRDEAGTCCIWIEELKDLREDF 279
             V +T     +A    AE C + C G C CTA++Y         G C +W  EL D  + F
Sbjct:   375 V-KTPDLYQLAGFLNAEQCYQDCLGNCSCTAFAYISG-----IG-CLVWNRELVDTVQ-F 426

Query:   280 SNGGHELYIRVAATDLESAENKTEG--GSTQQVEAF 313
              + G  L +R+A+++L +  N+T+   G+T  +  F
Sbjct:   427 LSDGESLSLRLASSEL-AGSNRTKIILGTTVSLSIF 461

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

TAIR|locus:2197734 AT1G61370 [Arabidopsis thaliana (taxid:3702)]

 Score = 332 (121.9 bits), Expect = 4.9e-74, Sum P(4) = 4.9e-74
 Identities = 101/323 (31%), Positives = 155/323 (47%)

Query:     1 MDSGNFVLQDDQVRKNLWESFKYPTDTFL---AGMYMGENLS---LTSWAGHDDPKPGNF 54
             +++GN VL D    +NLWESF++  DT L   + MY   N     L+SW    DP PG F
Sbjct:   125 LENGNLVLIDGVSERNLWESFEHLGDTMLLESSVMYDVPNNKKRVLSSWKNPTDPSPGEF 184

Query:    55 TFKMD-QGENQYQITKPLIRHWRSAESKDVFSSNEIIPYQILNLLSNFSHSVK-PTGKNA 112
               ++  Q   Q  I +    +WR      V  +   IP    + +S F  S     G  +
Sbjct:   185 VAELTTQVPPQGFIMRGSRPYWRGGPWARVRFTG--IPEMDGSHVSKFDISQDVAAGTGS 242

Query:   113 VHPNLIVPSIDYSRTRLIMNYTGEIQY-WTEDKVKGWSLIWREPRDNCSVFHYCGNFGIC 171
             +  +L   + + S T L     G ++  W      GW      P  +C V++ CG FG+C
Sbjct:   243 LTYSLERRNSNLSYTTLTS--AGSLKIIWNNGS--GWVTDLEAPVSSCDVYNTCGPFGLC 298

Query:   172 NSNHKRKCQCLQGFVPSSPERWSSEDFLGGCIRKTAL-C----------GGKDMFLKRQI 220
               ++  KC+CL+GFVP S E W+  ++ GGC+R+T L C             D+F     
Sbjct:   299 IRSNPPKCECLKGFVPKSDEEWNKRNWTGGCMRRTNLSCDVNSSATAQANNGDIFDIVAN 358

Query:   221 TKVGETDSCLPVASEAECSKKCRGFCPCTAYSYKESKRRDEAGTCCIWIEELKDLREDFS 280
              K  +    L + +E +C ++C G C CTA+SY E     + G C +W  EL D+ + F 
Sbjct:   359 VKPPDFYEYLSLINEEDCQQRCLGNCSCTAFSYIE-----QIG-CLVWNRELVDVMQ-FV 411

Query:   281 NGGHELYIRVAATDLESAENKTE 303
              GG  L IR+A+++L +  N+ +
Sbjct:   412 AGGETLSIRLASSEL-AGSNRVK 433

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

TAIR|locus:2197729 SD1-29 "S-domain-1 29" [Arabidopsis thaliana (taxid:3702)]

 Score = 331 (121.6 bits), Expect = 6.7e-73, Sum P(4) = 6.7e-73
 Identities = 95/333 (28%), Positives = 157/333 (47%)

Query:     1 MDSGNFVLQDDQVRKNLWESFKYPTDTFLAG---MY---MGENLSLTSWAGHDDPKPGNF 54
             +D+GNFV+ DD     LW+SF++  +T L     MY    G+   LT+W  + DP PG F
Sbjct:   121 LDTGNFVVIDDVSGNKLWQSFEHLGNTMLPQSSLMYDTSNGKKRVLTTWKSNSDPSPGEF 180

Query:    55 TFKMD-QGENQYQITKPLIRHWRSAE-SKDVFSSNEIIPYQILNLLSNFSHSVKPTGKNA 112
             + ++  Q   Q  I +  + +WR    +K  FS    I    ++  S    +   TG  +
Sbjct:   181 SLEITPQIPTQGLIRRGSVPYWRCGPWAKTRFSGISGIDASYVSPFSVVQDTAAGTGSFS 240

Query:   113 VHPNLIVPSIDYSRTRLIMNYTGEIQYWTEDKVKGWSLIWREPRDNCSVFHYCGNFGICN 172
              +  L     +Y+ + + +   G+++   +D    W L    P + C ++  CG +G+C 
Sbjct:   241 -YSTLR----NYNLSYVTLTPEGKMKILWDDG-NNWKLHLSLPENPCDLYGRCGPYGLCV 294

Query:   173 SNHKRKCQCLQGFVPSSPERWSSEDFLGGCIRKTAL-CGGK----------DMFLKRQIT 221
              +   KC+CL+GFVP S E W   ++  GC+R+T L C  K          D+F +    
Sbjct:   295 RSDPPKCECLKGFVPKSDEEWGKGNWTSGCVRRTKLSCQAKSSMKTQGKDTDIFYRMTDV 354

Query:   222 KVGETDSCLPVASEAECSKKCRGFCPCTAYSYKESKRRDEAGTCCIWIEELKDLREDFSN 281
             K  +        +  +C + C G C CTA++Y         G C +W  EL D  + F +
Sbjct:   355 KTPDLHQFASFLNAEQCYQGCLGNCSCTAFAYISG-----IG-CLVWNGELADTVQ-FLS 407

Query:   282 GGHELYIRVAATDLE-SAENKTEGGSTQQVEAF 313
              G  L+IR+A+++L  S+  K   G+T  +  F
Sbjct:   408 SGEFLFIRLASSELAGSSRRKIIVGTTVSLSIF 440

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

GO:0031625 "ubiquitin protein ligase binding" evidence=IPI

GO:0046777 "protein autophosphorylation" evidence=RCA;IDA

TAIR|locus:2197664 AT1G61490 [Arabidopsis thaliana (taxid:3702)]

 Score = 326 (119.8 bits), Expect = 7.4e-72, Sum P(4) = 7.4e-72
 Identities = 105/328 (32%), Positives = 156/328 (47%)

Query:     2 DSGNFVLQDDQVRKNLWESFKYPTDTFL---AGMY---MGENLSLTSWAGHDDPKPGNFT 55
             D+GN V+ D+   + LWESF++  DT L   + MY    GE   LTSW    DP PG F 
Sbjct:   125 DNGNLVVIDNASGRTLWESFEHFGDTMLPFSSLMYNLATGEKRVLTSWKTDTDPSPGVFV 184

Query:    56 FKMD-QGENQYQITKPLIRHWRSAE-SKDVFSSNEIIPYQILNLLSNFSHSVKPTGKNAV 113
              ++  Q  +Q  I +   R++R+   +K  F+    IP       S FS      G    
Sbjct:   185 GQITPQVPSQVLIMRGSTRYYRTGPWAKTRFTG---IPLMDDTYASPFSLQQDANGSGF- 240

Query:   114 HPNLIVPSIDYSRTRLIMNYTGEIQYWTEDKVKGWSLIWREPRDNCSVFHYCGNFGICNS 173
                       +  +R+I++  G ++ +  +    W L +  P ++C ++  CG FG+C  
Sbjct:   241 ---FTYFDRSFKLSRIIISSEGSMKRFRHNGTD-WELSYMAPANSCDIYGVCGPFGLCIV 296

Query:   174 NHKRKCQCLQGFVPSSPERWSSEDFLGGCIRKTAL-C-G---GKDMFLKRQITKVGETDS 228
             +   KC+CL+GFVP S E W   ++ GGC R T L C G   GKD+ +   +T V   D 
Sbjct:   297 SVPLKCKCLKGFVPHSTEEWKRGNWTGGCARLTELHCQGNSTGKDVNIFHPVTNVKLPDF 356

Query:   229 CLPVAS-EAE-CSKKCRGFCPCTAYSYKESKRRDEAGTCCIWIEELKDLREDFSNGGHEL 286
                 +S +AE C + C   C C A++Y         G C IW + L D  + FS GG  L
Sbjct:   357 YEYESSVDAEECHQSCLHNCSCLAFAYIHG-----IG-CLIWNQNLMDAVQ-FSAGGEIL 409

Query:   287 YIRVAATDLE-SAENKTEGGSTQQVEAF 313
              IR+A ++L  +  NK    ST  +  F
Sbjct:   410 SIRLAHSELGGNKRNKIIVASTVSLSLF 437

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

TAIR|locus:2200888 AT1G61500 [Arabidopsis thaliana (taxid:3702)]

 Score = 322 (118.4 bits), Expect = 8.7e-72, Sum P(4) = 8.7e-72
 Identities = 94/315 (29%), Positives = 146/315 (46%)

Query:     2 DSGNFVLQDDQVRKNLWESFKYPTDTFLAGMYMGENLS------LTSWAGHDDPKPGNFT 55
             DSGN  + D+   + LW+SF +  DT L    +  NL+      LTSW  + DP PG+F 
Sbjct:   126 DSGNLKVIDNVSERALWQSFDHLGDTLLHTSSLTYNLATAEKRVLTSWKSYTDPSPGDFL 185

Query:    56 FKMD-QGENQYQITKPLIRHWRSAE-SKDVFSSNEIIPYQILNLLSNFSHSVKPTGKNAV 113
              ++  Q  +Q  + +    +WRS   +K  F+    IP+   +    F+      G    
Sbjct:   186 GQITPQVPSQGFVMRGSTPYWRSGPWAKTRFTG---IPFMDESYTGPFTLHQDVNGSGY- 241

Query:   114 HPNLIVPSIDYSRTRLIMNYTGEIQYWTEDKVKGWSLIWREPRDNCSVFHYCGNFGICNS 173
                L     DY  +R+ +   G I+ +  D   GW L +  P+  C  +  CG FG+C  
Sbjct:   242 ---LTYFQRDYKLSRITLTSEGSIKMF-RDNGMGWELYYEAPKKLCDFYGACGPFGLCVM 297

Query:   174 NHKRKCQCLQGFVPSSPERWSSEDFLGGCIRKTAL-C-G---GKDMFLKRQITKVGETD- 227
             +    C+C +GFVP S E W   ++ GGC+R T L C G   G+D     QI  +   D 
Sbjct:   298 SPSPMCKCFRGFVPKSVEEWKRGNWTGGCVRHTELDCLGNSTGEDADDFHQIANIKPPDF 357

Query:   228 -SCLPVASEAECSKKCRGFCPCTAYSYKESKRRDEAGTCCIWIEELKDLREDFSNGGHEL 286
                    +  EC ++C   C C A++Y +       G C +W ++L D  + FS  G  L
Sbjct:   358 YEFASSVNAEECHQRCVHNCSCLAFAYIKG-----IG-CLVWNQDLMDAVQ-FSATGELL 410

Query:   287 YIRVAATDLESAENK 301
              IR+A ++L+  + K
Sbjct:   411 SIRLARSELDGNKRK 425

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	0.824
3rd Layer	2.7.11	0.766

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	626
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	3e-22
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	4e-19
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	5e-19
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	7e-19
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	1e-18
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	6e-18
pfam00954	110	pfam00954, S_locus_glycop, S-locus glycoprotein fa	2e-17
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	8e-16
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	9e-16
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	5e-15
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	2e-14
pfam01453	109	pfam01453, B_lectin, D-mannose binding lectin	1e-13
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	3e-13
cd01098	84	cd01098, PAN_AP_plant, Plant PAN/APPLE-like domain	7e-13
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	1e-12
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	1e-11
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	2e-11
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	2e-11
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	2e-11
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	3e-11
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	6e-11
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	9e-11
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	1e-10
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	3e-10
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	3e-10
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	8e-10
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	8e-10
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	9e-10
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	1e-09
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	2e-09
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	4e-09
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	8e-09
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	1e-08
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	1e-08
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	1e-08
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	2e-08
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	2e-08
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	2e-08
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	2e-08
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	2e-08
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	2e-08
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	5e-08
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	5e-08
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	6e-08
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	7e-08
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	8e-08
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	9e-08
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	1e-07
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	1e-07
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	1e-07
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	1e-07
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	1e-07
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	1e-07
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	1e-07
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	2e-07
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	2e-07
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	2e-07
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	2e-07
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	2e-07
pfam08276	66	pfam08276, PAN_2, PAN-like domain	4e-07
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	5e-07
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	6e-07
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	6e-07
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	6e-07
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	6e-07
cd05074	273	cd05074, PTKc_Tyro3, Catalytic domain of the Prote	6e-07
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	7e-07
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	7e-07
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	8e-07
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	8e-07
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	8e-07
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	8e-07
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	9e-07
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	9e-07
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	1e-06
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	1e-06
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	1e-06
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	1e-06
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	2e-06
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	2e-06
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	2e-06
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	2e-06
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	2e-06
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	2e-06
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	2e-06
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	3e-06
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	3e-06
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	3e-06
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	3e-06
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	3e-06
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	3e-06
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	3e-06
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	3e-06
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	4e-06
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	4e-06
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	4e-06
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	5e-06
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	5e-06
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	5e-06
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	6e-06
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	6e-06
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	6e-06
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	7e-06
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	8e-06
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	1e-05
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	1e-05
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	1e-05
cd05109	279	cd05109, PTKc_HER2, Catalytic domain of the Protei	1e-05
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	1e-05
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	1e-05
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	1e-05
cd05043	280	cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece	1e-05
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	2e-05
PHA03207	392	PHA03207, PHA03207, serine/threonine kinase US3; P	2e-05
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	2e-05
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	2e-05
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	2e-05
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	2e-05
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	3e-05
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	3e-05
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	3e-05
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	3e-05
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	3e-05
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	4e-05
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	4e-05
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	4e-05
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	5e-05
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	5e-05
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	5e-05
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	5e-05
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	5e-05
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	5e-05
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	5e-05
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	6e-05
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	6e-05
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	6e-05
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	7e-05
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	8e-05
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	8e-05
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	8e-05
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	8e-05
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	9e-05
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	9e-05
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	9e-05
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	9e-05
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	9e-05
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	9e-05
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	1e-04
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	1e-04
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	1e-04
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	1e-04
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	1e-04
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	1e-04
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	1e-04
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	1e-04
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	1e-04
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	2e-04
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	2e-04
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	2e-04
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	2e-04
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	2e-04
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	2e-04
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	2e-04
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	2e-04
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	2e-04
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	2e-04
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	2e-04
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	2e-04
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	2e-04
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	2e-04
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	3e-04
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	3e-04
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	3e-04
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	3e-04
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	3e-04
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	3e-04
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	3e-04
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	3e-04
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	4e-04
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	4e-04
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	4e-04
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	4e-04
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	4e-04
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	4e-04
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	4e-04
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	5e-04
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	5e-04
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	5e-04
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	5e-04
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	5e-04
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	5e-04
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	6e-04
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	6e-04
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	6e-04
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	7e-04
PLN03224	507	PLN03224, PLN03224, probable serine/threonine prot	7e-04
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	8e-04
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	8e-04
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	8e-04
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	9e-04
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	0.001
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	0.001
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	0.001
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	0.001
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	0.001
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	0.001
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	0.001
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	0.001
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	0.001
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	0.001
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	0.001
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	0.002
cd05102	338	cd05102, PTKc_VEGFR3, Catalytic domain of the Prot	0.002
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	0.002
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	0.002
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	0.002
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	0.002
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	0.002
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	0.002
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	0.002
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	0.002
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	0.003
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	0.003
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	0.003
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	0.003
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	0.003
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	0.003
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	0.004
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	0.004
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	0.004
cd05105	400	cd05105, PTKc_PDGFR_alpha, Catalytic domain of the	0.004
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	0.004
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	0.004

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 95.0 bits (237), Expect = 3e-22
 Identities = 58/217 (26%), Positives = 85/217 (39%), Gaps = 55/217 (25%)

Query: 413 LGKGGFGPVYKAKFPG-GQQIAVKRLS-SASGQGLEEFKNEIETSNS----------NAT 460
           LG+GGFG VY A+    G+++A+K +    S   LEE   EIE                 
Sbjct: 1   LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVF 60

Query: 461 IGANVKAFVREMKTFSDPTLSALLH-------WEMRFNIIIGIARGLLYLHQDSRLRIIH 513
              N    V  M+     +L  LL         +    I++ I  GL YLH      IIH
Sbjct: 61  EDENHLYLV--MEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHS---NGIIH 115

Query: 514 RDLKTSNILLDQ-EMNPKISDFGLALDMMDQKLHASSK-------PNEILKCIN------ 559
           RDLK  NILLD      K++DFGL+  +   K    +          E+L          
Sbjct: 116 RDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKS 175

Query: 560 ----VGLL-------------CVQEDPNDRPTMSDVV 579
               +G++              +Q+DP  RP+  +++
Sbjct: 176 DIWSLGVILYELPELKDLIRKMLQKDPEKRPSAKEIL 212

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 87.2 bits (217), Expect = 4e-19
 Identities = 46/157 (29%), Positives = 63/157 (40%), Gaps = 39/157 (24%)

Query: 412 KLGKGGFGPVYKAK-----FPGGQQIAVKRL-SSASGQGLEEFKNEIE------------ 453
           KLG+G FG VYK            ++AVK L   AS Q +EEF  E              
Sbjct: 6   KLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNIVK 65

Query: 454 -----TSNSNATI------GANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLY 502
                T      I      G ++  ++R+ +          L      +  + IARG+ Y
Sbjct: 66  LLGVCTEEEPLMIVMEYMPGGDLLDYLRKNR-------PKELSLSDLLSFALQIARGMEY 118

Query: 503 LHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALD 539
           L        IHRDL   N L+ + +  KISDFGL+ D
Sbjct: 119 LE---SKNFIHRDLAARNCLVGENLVVKISDFGLSRD 152

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 86.8 bits (216), Expect = 5e-19
 Identities = 49/167 (29%), Positives = 71/167 (42%), Gaps = 40/167 (23%)

Query: 412 KLGKGGFGPVYKAK-----FPGGQQIAVKRL-SSASGQGLEEFKNEIET----SNSN--A 459
           KLG+G FG VYK K          ++AVK L   AS Q +EEF  E        + N   
Sbjct: 6   KLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNVVK 65

Query: 460 TIGA-----------------NVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLY 502
            +G                  ++ +++R+ +    P LS         +  + IARG+ Y
Sbjct: 66  LLGVCTEEEPLYIVMEYMEGGDLLSYLRKNR----PKLS----LSDLLSFALQIARGMEY 117

Query: 503 LHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASS 549
           L        IHRDL   N L+ + +  KISDFGL+ D+ D   +   
Sbjct: 118 LE---SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYRKR 161

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 86.4 bits (215), Expect = 7e-19
 Identities = 44/160 (27%), Positives = 71/160 (44%), Gaps = 31/160 (19%)

Query: 411 NKLGKGGFGPVYKAKFPGGQ----QIAVKRL-SSASGQGLEEFKNEIET----SNSN--A 459
            KLG+G FG VYK K  G      ++AVK L   AS +  ++F  E        + N   
Sbjct: 1   KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVR 60

Query: 460 TIGA-----------------NVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLY 502
            +G                  ++  ++R+ +        + L  +   +  I IA+G+ Y
Sbjct: 61  LLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEY 120

Query: 503 LHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD 542
           L      + +HRDL   N L+ +++  KISDFGL+ D+ D
Sbjct: 121 LAS---KKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 85.8 bits (213), Expect = 1e-18
 Identities = 51/152 (33%), Positives = 67/152 (44%), Gaps = 38/152 (25%)

Query: 412 KLGKGGFGPVYKAKFPG-GQQIAVKRL--SSASGQGLEEFKNEI---------------- 452
           KLG G FG VYKAK  G G+ +AVK L   S   +  +  + EI                
Sbjct: 6   KLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNIVRLID 65

Query: 453 --ETSNSNATI-----GANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQ 505
             E  +    +     G ++  ++      S+         E +  I + I RGL YLH 
Sbjct: 66  AFEDKDHLYLVMEYCEGGDLFDYLSRGGPLSE--------DEAKK-IALQILRGLEYLH- 115

Query: 506 DSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
                IIHRDLK  NILLD+    KI+DFGLA
Sbjct: 116 --SNGIIHRDLKPENILLDENGVVKIADFGLA 145

Length = 260

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 83.3 bits (207), Expect = 6e-18
 Identities = 42/152 (27%), Positives = 64/152 (42%), Gaps = 37/152 (24%)

Query: 411 NKLGKGGFGPVYKAKF-PGGQQIAVKRLS-SASGQGLEEFKNEIE--------------- 453
            KLG+G FG VY A+    G+ +A+K +      +  E    EI+               
Sbjct: 5   EKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIVRLYD 64

Query: 454 --TSNSNATI------GANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQ 505
                    +      G ++   +++    S+         E RF  +  I   L YLH 
Sbjct: 65  VFEDEDKLYLVMEYCEGGDLFDLLKKRGRLSED--------EARF-YLRQILSALEYLHS 115

Query: 506 DSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
                I+HRDLK  NILLD++ + K++DFGLA
Sbjct: 116 ---KGIVHRDLKPENILLDEDGHVKLADFGLA 144

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|201524 pfam00954, S_locus_glycop, S-locus glycoprotein family

 Score = 78.1 bits (193), Expect = 2e-17
 Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 1/64 (1%)

Query: 127 TRLIMNYTGEIQ-YWTEDKVKGWSLIWREPRDNCSVFHYCGNFGICNSNHKRKCQCLQGF 185
           +RL ++  G ++ +      + W+L W  P+D C V+  CG +G C+ N   KC C++GF
Sbjct: 47  SRLTLSSEGSLERFTWIPNSQDWNLFWSAPKDQCDVYGRCGPYGYCDVNTSPKCNCIKGF 106

Query: 186 VPSS 189
           VP +
Sbjct: 107 VPKN 110

In Brassicaceae, self-incompatible plants have a self/non-self recognition system. This is sporophytically controlled by multiple alleles at a single locus (S). S-locus glycoproteins, as well as S-receptor kinases, are in linkage with the S-alleles. Length = 110

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 77.6 bits (192), Expect = 8e-16
 Identities = 48/146 (32%), Positives = 67/146 (45%), Gaps = 22/146 (15%)

Query: 411 NKLGKGGFGPVYKAKFPG-GQQIAVK--RLSSASGQGLEEFKNEIET----SNSN--ATI 461
             LG+G FG VY A     G+ +AVK   LS  S + LE  + EI       + N     
Sbjct: 6   ELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYY 65

Query: 462 GANVKAFVREMKTF----SDPTLSALLHWEMRFNI-IIG-----IARGLLYLHQDSRLRI 511
           G+        +  F    S  +LS+LL    +    +I      I  GL YLH      I
Sbjct: 66  GSERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLH---SNGI 122

Query: 512 IHRDLKTSNILLDQEMNPKISDFGLA 537
           +HRD+K +NIL+D +   K++DFG A
Sbjct: 123 VHRDIKGANILVDSDGVVKLADFGCA 148

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 77.2 bits (191), Expect = 9e-16
 Identities = 47/160 (29%), Positives = 67/160 (41%), Gaps = 40/160 (25%)

Query: 412 KLGKGGFGPVYKA-----KFPGGQQIAVKRL-SSASGQGLEEFKNEIET----SNSN--A 459
           KLG+G FG VYK            ++AVK L   AS +  EEF  E       S+ N   
Sbjct: 6   KLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSHPNIVR 65

Query: 460 TIGA-----------------NVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLY 502
            +G                  ++  F+R+       TL  LL         + IA+G+ Y
Sbjct: 66  LLGVCTQGEPLYIVTEYMPGGDLLDFLRKHG--EKLTLKDLLQM------ALQIAKGMEY 117

Query: 503 LHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD 542
           L        +HRDL   N L+ + +  KISDFGL+ D+ +
Sbjct: 118 LE---SKNFVHRDLAARNCLVTENLVVKISDFGLSRDIYE 154

Length = 258

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 74.9 bits (185), Expect = 5e-15
 Identities = 48/155 (30%), Positives = 75/155 (48%), Gaps = 29/155 (18%)

Query: 407 FSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQGLEEFKNEIET----SNSNATI 461
           F    K+GKGGFG VYKA+    G+++A+K +   S +  E+  NEI+      + N   
Sbjct: 2   FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPN--- 58

Query: 462 GANVK---AFVRE------MKTFSDPTLSALL-HWEMRFN------IIIGIARGLLYLHQ 505
              VK   +++++      M+  S  +L  LL              +   + +GL YLH 
Sbjct: 59  --IVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHS 116

Query: 506 DSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM 540
                IIHRD+K +NILL  +   K+ DFGL+  +
Sbjct: 117 ---NGIIHRDIKAANILLTSDGEVKLIDFGLSAQL 148

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 73.4 bits (181), Expect = 2e-14
 Identities = 40/151 (26%), Positives = 64/151 (42%), Gaps = 36/151 (23%)

Query: 412 KLGKGGFGPVYKAKF-PGGQQIAVKRLSSASG-----QGLEEFKNEIETSN--------- 456
            LG+G  G VYK +  P G+  A+K++          Q L E K      +         
Sbjct: 8   VLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGA 67

Query: 457 --SNATI--------GANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQD 506
                 I        G ++   ++++    +P L+          I   I +GL YLH  
Sbjct: 68  FYKEGEISIVLEYMDGGSLADLLKKVGKIPEPVLAY---------IARQILKGLDYLHTK 118

Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
               IIHRD+K SN+L++ +   KI+DFG++
Sbjct: 119 --RHIIHRDIKPSNLLINSKGEVKIADFGIS 147

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|216511 pfam01453, B_lectin, D-mannose binding lectin

 Score = 67.4 bits (165), Expect = 1e-13
 Identities = 24/54 (44%), Positives = 29/54 (53%), Gaps = 6/54 (11%)

Query: 1   MDSGNFVLQDDQVRKNLWESFKYPTDTFLAGMYM-----GENLSLTSWAGHDDP 49
            D GN VL D+   K LW+SF +PTDT L G        G +  LTSW  + DP
Sbjct: 56  QDDGNLVLYDNS-GKVLWQSFDHPTDTLLPGQKDGNVVIGGSRRLTSWKSNTDP 108

These proteins include mannose-specific lectins from plants as well as bacteriocins from bacteria. Length = 109

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 69.6 bits (171), Expect = 3e-13
 Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 26/159 (16%)

Query: 406 NFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSA--SGQGLEEFKNEIE-TSNSN-AT 460
           N+   + +G+G FG VYK      G  +A+K++S      + L+    EI+   N     
Sbjct: 1   NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPN 60

Query: 461 IGANVK--AFVREMKTF-------SDPTLSALLHWEMRFN---IIIGIA---RGLLYLHQ 505
           I   VK    +    +         + +L  ++     F    + + +    +GL YLH+
Sbjct: 61  I---VKYIGSIETSDSLYIILEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHE 117

Query: 506 DSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQK 544
                +IHRD+K +NIL  ++   K++DFG+A  + D  
Sbjct: 118 QG---VIHRDIKAANILTTKDGVVKLADFGVATKLNDVS 153

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|238531 cd01098, PAN_AP_plant, Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins

 Score = 64.0 bits (156), Expect = 7e-13
 Identities = 32/86 (37%), Positives = 43/86 (50%), Gaps = 9/86 (10%)

Query: 209 CGGK---DMFLKRQITKVGETDSCLPVASEAECSKKCRGFCPCTAYSYKESKRRDEAGTC 265
           CGG    D FLK    K+ +  S +   S  EC + C   C CTAY+Y        +G C
Sbjct: 5   CGGDGSTDGFLKLPDVKLPDNASAITAISLEECREACLSNCSCTAYAYNNG-----SGGC 59

Query: 266 CIWIEELKDLREDFSNGGHELYIRVA 291
            +W   L +LR   S+GG  LY+R+A
Sbjct: 60  LLWNGLLNNLR-SLSSGGGTLYLRLA 84

PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. S-receptor protein kinases and S-locus glycoproteins are involved in sporophytic self-incompatibility response in Brassica, one of probably many molecular mechanisms, by which hermaphrodite flowering plants avoid self-fertilization. Length = 84

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 68.2 bits (167), Expect = 1e-12
 Identities = 50/151 (33%), Positives = 65/151 (43%), Gaps = 28/151 (18%)

Query: 411 NKLGKGGFGPVYKAK--FPG---GQQIAVKRLS-SASGQGLEEFKNEIET------SNSN 458
            +LG+G FG V   +    G   G+Q+AVK L+ S   Q   +F+ EIE        N  
Sbjct: 10  KQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIV 69

Query: 459 ATIGANVKAFVRE----MKTFSDPTLSALLHWEMRFNIIIG--------IARGLLYLHQD 506
              G   K   R     M+     +L   L    R  I +         I +G+ YL   
Sbjct: 70  KYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQ-RHRDQINLKRLLLFSSQICKGMDYLGS- 127

Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
              R IHRDL   NIL++ E   KISDFGLA
Sbjct: 128 --QRYIHRDLAARNILVESEDLVKISDFGLA 156

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 65.1 bits (159), Expect = 1e-11
 Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 25/170 (14%)

Query: 405 DNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRL-----SSASGQGLEEFKNEIETSNSN 458
           D+     +LG+G +G V K +  P G  +AVKR+     S    + L +    + + +  
Sbjct: 1   DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCP 60

Query: 459 ATI---GA-----NVKAFVREMKTFSDPTLSALLHWEMRF------NIIIGIARGLLYLH 504
            T+   GA     +V   +  M T  D     +    +         I + I + L YLH
Sbjct: 61  YTVTFYGALFREGDVWICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLH 120

Query: 505 QDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA---LDMMDQKLHASSKP 551
             S+L +IHRD+K SN+L+++    K+ DFG++   +D + + + A  KP
Sbjct: 121 --SKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVAKTIDAGCKP 168

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 64.9 bits (159), Expect = 2e-11
 Identities = 40/158 (25%), Positives = 69/158 (43%), Gaps = 36/158 (22%)

Query: 404 TDNFSEANKLGKGGFGPVYKAKFPG-GQQIAVKRLSSASGQGLEEFKNEIE---TSNSNA 459
            + +    K+G+G  G VYKA     G+++A+K++     Q  E   NEI          
Sbjct: 18  RELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMR-LRKQNKELIINEILIMKDCKHP- 75

Query: 460 TIGANVKAFVREMKTFSDP-------------TLSALLHW-EMRFN------IIIGIARG 499
               N+   V    ++                +L+ ++    +R N      +   + +G
Sbjct: 76  ----NI---VDYYDSYLVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQG 128

Query: 500 LLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           L YLH      +IHRD+K+ NILL ++ + K++DFG A
Sbjct: 129 LEYLHS---QNVIHRDIKSDNILLSKDGSVKLADFGFA 163

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 64.6 bits (158), Expect = 2e-11
 Identities = 43/151 (28%), Positives = 70/151 (46%), Gaps = 39/151 (25%)

Query: 412 KLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQGLEEFKNEIET---------------- 454
           KLG+G +G VYKA     GQ +A+K +     + L+E   EI                  
Sbjct: 10  KLGEGSYGSVYKAIHKETGQVVAIKVVPV--EEDLQEIIKEISILKQCDSPYIVKYYGSY 67

Query: 455 -SNSNATI------GANVKAFVREM-KTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQD 506
             N++  I        +V   ++   KT ++  ++A+L+            +GL YLH  
Sbjct: 68  FKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILY---------QTLKGLEYLHS- 117

Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
              + IHRD+K  NILL++E   K++DFG++
Sbjct: 118 --NKKIHRDIKAGNILLNEEGQAKLADFGVS 146

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 64.0 bits (156), Expect = 2e-11
 Identities = 50/153 (32%), Positives = 69/153 (45%), Gaps = 24/153 (15%)

Query: 406 NFSEANKLGKGGFGPVYKAK-FPGGQQIAVKR--LSSASGQGLEEFKNEIE----TSNSN 458
           +F    KLGKG +G VYK K     Q  A+K   L S S +  E+  NEI      ++ N
Sbjct: 1   DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPN 60

Query: 459 ------ATIGANVKAFVREMKTFSD--------PTLSALLHWEMRFNIIIGIARGLLYLH 504
                 A +  N    V E   F D             L+  +  + I I + RGL  LH
Sbjct: 61  IISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALH 120

Query: 505 QDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           +    +I+HRDLK++NILL      KI D G++
Sbjct: 121 E---QKILHRDLKSANILLVANDLVKIGDLGIS 150

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 63.7 bits (156), Expect = 3e-11
 Identities = 43/159 (27%), Positives = 68/159 (42%), Gaps = 29/159 (18%)

Query: 413 LGKGGFGPVYKAKFPGGQQI-AVKRLSSASGQGLEEFKNEIETSNSNATIGANVK-AFVR 470
           LGKG FG V   +     ++ A+K L           + E+E + +   I + +   F+ 
Sbjct: 1   LGKGSFGKVLLVRKKDTGKLYAMKVLKKKK----IIKRKEVEHTLTERNILSRINHPFIV 56

Query: 471 EMK-TFSDPT-------------LSALLHWEMRFN------IIIGIARGLLYLHQDSRLR 510
           ++   F                 L + L  E RF+          I   L YLH    L 
Sbjct: 57  KLHYAFQTEEKLYLVLEYAPGGELFSHLSKEGRFSEERARFYAAEIVLALEYLH---SLG 113

Query: 511 IIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASS 549
           II+RDLK  NILLD + + K++DFGLA ++  +    ++
Sbjct: 114 IIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNT 152

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 62.9 bits (154), Expect = 6e-11
 Identities = 40/157 (25%), Positives = 62/157 (39%), Gaps = 42/157 (26%)

Query: 411 NKLGKGGFGPVYKAK-FPGGQQIAVKR--LSSASGQGLEEFKNEI--------------- 452
            ++GKG FG VY  +    G+   +K   LS+ S +  E+  NE+               
Sbjct: 6   KQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYY 65

Query: 453 ---ETSNS---------NATIGANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGL 500
              E                +   +K   +E K F +  +   L W       + +   L
Sbjct: 66  ESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQI---LDW------FVQLCLAL 116

Query: 501 LYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            YLH  SR +I+HRD+K  NI L      K+ DFG++
Sbjct: 117 KYLH--SR-KILHRDIKPQNIFLTSNGLVKLGDFGIS 150

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 62.5 bits (152), Expect = 9e-11
 Identities = 38/154 (24%), Positives = 67/154 (43%), Gaps = 33/154 (21%)

Query: 407 FSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIE------------- 453
           F+   KLG G FG V++  +    ++A+K L S      ++F+ E++             
Sbjct: 8   FTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISL 67

Query: 454 ----TSNSNATI------GANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYL 503
               +      I        ++ AF+R  +    P  S +       ++   +A G+ YL
Sbjct: 68  FAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLI-------DMACQVAEGMAYL 120

Query: 504 HQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            +      IHRDL   NIL+ +++  K++DFGLA
Sbjct: 121 EEQ---NSIHRDLAARNILVGEDLVCKVADFGLA 151

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 62.6 bits (153), Expect = 1e-10
 Identities = 46/155 (29%), Positives = 73/155 (47%), Gaps = 40/155 (25%)

Query: 411 NKLGKGGFGPVYKAKFPG-GQQIAVKRLSSASG------QGLEEFK-------------N 450
            ++G+G +G VYKA+    G+ +A+K++   +         + E K              
Sbjct: 5   AQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLK 64

Query: 451 EIETSNSNATIGANVKAF-VREMKTFSDPTLSALL-HWEMRFNI--IIGIAR----GLLY 502
           EI TS    +I      + V E   + D  L+ LL   E++F    I    +    GL Y
Sbjct: 65  EIVTSKGKGSI------YMVFE---YMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQY 115

Query: 503 LHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           LH +    I+HRD+K SNIL++ +   K++DFGLA
Sbjct: 116 LHSN---GILHRDIKGSNILINNDGVLKLADFGLA 147

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 61.0 bits (149), Expect = 3e-10
 Identities = 21/40 (52%), Positives = 28/40 (70%), Gaps = 3/40 (7%)

Query: 498 RGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           RGL Y H     RI+HRDLK  NIL++++   K++DFGLA
Sbjct: 109 RGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLA 145

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 61.2 bits (149), Expect = 3e-10
 Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 34/175 (19%)

Query: 388 QGIDLPFIDFESILAATDNFSEANKLGKGGFGPVYKAKFPGGQQI-AVKR-LSSASGQG- 444
              + PF D          + +  K+G+G FG V+KA+    +QI A+K+ L     +G 
Sbjct: 1   DQYEFPFCD------EVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGF 54

Query: 445 ----------LEEFKNE-----IETSNSNATIGANVKAFVREMKTFSDPTLSALL-HWEM 488
                     L+  K+E     IE   + AT     K     +  F +  L+ LL +  +
Sbjct: 55  PITALREIKILQLLKHENVVNLIEICRTKATPYNRYKGSFYLVFEFCEHDLAGLLSNKNV 114

Query: 489 RFN------IIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           +F       ++  +  GL Y+H   R +I+HRD+K +NIL+ ++   K++DFGLA
Sbjct: 115 KFTLSEIKKVMKMLLNGLYYIH---RNKILHRDMKAANILITKDGILKLADFGLA 166

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 59.8 bits (145), Expect = 8e-10
 Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 27/154 (17%)

Query: 413 LGKGGFGPVY------KAKFPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVK 466
           LGKGGFG V         K    +++  KRL    G+ +   + +I    S+  I +   
Sbjct: 1   LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAY 60

Query: 467 AFVREMKTFSDPTLSALLHWEMRFNI----------------IIGIARGLLYLHQDSRLR 510
           AF  E K      ++ +   +++++I                   I  GL +LHQ    R
Sbjct: 61  AF--ETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQ---RR 115

Query: 511 IIHRDLKTSNILLDQEMNPKISDFGLALDMMDQK 544
           I++RDLK  N+LLD   N +ISD GLA+++   K
Sbjct: 116 IVYRDLKPENVLLDDHGNVRISDLGLAVELKGGK 149

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 60.9 bits (146), Expect = 8e-10
 Identities = 49/148 (33%), Positives = 65/148 (43%), Gaps = 27/148 (18%)

Query: 412 KLGKGGFGPVYKAKFPGGQQIAVKRLSSA---SGQGLEEFKNEIETSNSNATIGANVK-- 466
           KLG+G FG VY A+    + +A+K L+       + +E F  EI+   S       VK  
Sbjct: 7   KLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLY 64

Query: 467 -AFVRE------MKTFSDPTLSALLHWEMR---------FNIIIGIARGLLYLHQDSRLR 510
             F  E      M+     +L  LL    R           I+  I   L YLH      
Sbjct: 65  DFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLH---SKG 121

Query: 511 IIHRDLKTSNILLDQEMN-PKISDFGLA 537
           IIHRD+K  NILLD++    K+ DFGLA
Sbjct: 122 IIHRDIKPENILLDRDGRVVKLIDFGLA 149

Length = 384

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 60.0 bits (146), Expect = 9e-10
 Identities = 44/160 (27%), Positives = 73/160 (45%), Gaps = 28/160 (17%)

Query: 403 ATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRL---SSASG---QGLEEFK------ 449
              ++    KLG+G FG VYKA +   G+ +A+K++   +   G     L E K      
Sbjct: 6   KLRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLK 65

Query: 450 -----NEIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWE-MRF------NIIIGIA 497
                  I+ +          +  V  +  + D  LS LL    ++         ++ + 
Sbjct: 66  HPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLL 125

Query: 498 RGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            G+ YLH++    I+HRD+K +NIL+D +   KI+DFGLA
Sbjct: 126 EGINYLHEN---HILHRDIKAANILIDNQGILKIADFGLA 162

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 59.3 bits (144), Expect = 1e-09
 Identities = 39/158 (24%), Positives = 67/158 (42%), Gaps = 37/158 (23%)

Query: 411 NKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASG-----QGLEEFKNEIETSN-------- 456
            +LG G  G V K    P G+ +AVK +          Q L E     + ++        
Sbjct: 7   GELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYG 66

Query: 457 ---SNATI--------GANVKAFVREM-KTFSDPTLSALLHWEMRFNIIIGIARGLLYLH 504
              +N  I        G ++   ++E+     +  L           I + + +GL YLH
Sbjct: 67  AFYNNGDISICMEYMDGGSLDKILKEVQGRIPERILGK---------IAVAVLKGLTYLH 117

Query: 505 QDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD 542
              + +IIHRD+K SNIL++     K+ DFG++  +++
Sbjct: 118 --EKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVN 153

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 58.3 bits (141), Expect = 2e-09
 Identities = 45/163 (27%), Positives = 76/163 (46%), Gaps = 22/163 (13%)

Query: 406 NFSEANKLGKGGFGPVYKA-KFPGGQQIAVKR--LSSASGQGLEEFKNE--IETSNSNAT 460
           +F   NK+GKG FG V+K  +    +  A+K+  LS  + +  EE  +E  +     ++ 
Sbjct: 1   DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSY 60

Query: 461 IGANVKAFVRE------MKTFSDPTLSALLHWEMR--------FNIIIGIARGLLYLHQD 506
           I    ++F+ +      M+   +  L  LL  +          +   I I  GL +LH  
Sbjct: 61  IIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK 120

Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASS 549
              +I+HRD+K+ N+ LD   N KI D G+A  + D    A++
Sbjct: 121 ---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANT 160

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 57.7 bits (140), Expect = 4e-09
 Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 31/155 (20%)

Query: 405 DNFSEANKLGKGGFGPVYKAK-FPGGQQIAVKRLSSASGQGLEEFKNEIETSNS--NATI 461
           +++    ++G G +G VYKA+    G+ +A+K +    G   E  + EI       +  I
Sbjct: 3   EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNI 62

Query: 462 GANVKAFVRE------MKTFSDPTLSALLHWEMRFNIIIG------IA-------RGLLY 502
            A   +++R       M+     +L  +        +  G      IA       +GL Y
Sbjct: 63  VAYFGSYLRRDKLWIVMEYCGGGSLQDIYQ------VTRGPLSELQIAYVCRETLKGLAY 116

Query: 503 LHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           LH+      IHRD+K +NILL ++ + K++DFG++
Sbjct: 117 LHE---TGKIHRDIKGANILLTEDGDVKLADFGVS 148

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 56.9 bits (138), Expect = 8e-09
 Identities = 44/153 (28%), Positives = 69/153 (45%), Gaps = 32/153 (20%)

Query: 407 FSEANKLGKGGFGPVYKAKFPG-GQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANV 465
           F+    +GKG FG VYKA      Q +A+K +       LEE ++EIE         +  
Sbjct: 3   FTLLECIGKGSFGEVYKAIDKRTNQVVAIKVID------LEEAEDEIEDIQQEIQFLSQC 56

Query: 466 K---------AFVREMK-----------TFSDPTLSALLHWEMRFNIII-GIARGLLYLH 504
           +         +F++  K           +  D      L  E     I+  +  GL YLH
Sbjct: 57  RSPYITKYYGSFLKGSKLWIIMEYCGGGSCLDLLKPGKLD-ETYIAFILREVLLGLEYLH 115

Query: 505 QDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           ++     IHRD+K +NILL +E + K++DFG++
Sbjct: 116 EE---GKIHRDIKAANILLSEEGDVKLADFGVS 145

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 56.7 bits (137), Expect = 1e-08
 Identities = 43/153 (28%), Positives = 63/153 (41%), Gaps = 37/153 (24%)

Query: 413 LGKGGFGPVYKAKFP-----GGQQIAVKRLSSASGQGLEEFKNEIETSNS---------- 457
           LGKG FG V   ++       G+ +AVK+L  ++ + L +F+ EIE   S          
Sbjct: 12  LGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYK 71

Query: 458 NATIGANVKAFVREMKTFSDPTL-------------SALLHWEMRFNIIIGIARGLLYLH 504
                A  +     M+     +L               LL +  +      I +G+ YL 
Sbjct: 72  GVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQ------ICKGMEYL- 124

Query: 505 QDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
                R +HRDL T NIL++ E   KI DFGL 
Sbjct: 125 --GSKRYVHRDLATRNILVESENRVKIGDFGLT 155

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 56.3 bits (136), Expect = 1e-08
 Identities = 51/172 (29%), Positives = 75/172 (43%), Gaps = 62/172 (36%)

Query: 413 LGKGGFGPVYKAKF--PGGQQI--AVKRLSSASGQGLEEFKNEIETSNSNATIGANVKAF 468
           +GKG FG VY        GQ+I  AVK L+  +   LEE                 V+ F
Sbjct: 3   IGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITD--LEE-----------------VEQF 43

Query: 469 VRE---MKTFSDPTLSALL------------------HWEMRFNI-----------IIG- 495
           ++E   MK FS P + +LL                  H ++R  I           +IG 
Sbjct: 44  LKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGF 103

Query: 496 ---IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQK 544
              +A+G+ YL      + +HRDL   N +LD+    K++DFGLA D+ D++
Sbjct: 104 GLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKE 152

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 56.2 bits (136), Expect = 1e-08
 Identities = 41/154 (26%), Positives = 72/154 (46%), Gaps = 23/154 (14%)

Query: 405 DNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSAS-GQGLEEFKNEIETSNSNATIG 462
           ++  +  ++G+G FG V K    P G  +AVKR+ S    +  +    +++    ++   
Sbjct: 4   EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCP 63

Query: 463 ANVKAF-----------VREMKTFSDPTLSALLHWEMRFNI---IIG-----IARGLLYL 503
             VK +             E+   S       ++  ++  I   I+G       + L YL
Sbjct: 64  YIVKFYGALFREGDCWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYL 123

Query: 504 HQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            ++  L+IIHRD+K SNILLD+  N K+ DFG++
Sbjct: 124 KEE--LKIIHRDVKPSNILLDRNGNIKLCDFGIS 155

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 55.9 bits (135), Expect = 2e-08
 Identities = 52/203 (25%), Positives = 84/203 (41%), Gaps = 37/203 (18%)

Query: 406 NFSEANKLGKGGFGPVYKAKFPGG------QQIAVKRLSSASGQGLE-EFKNEIET---- 454
           N  E   LG+G FG V+ AK  G         + VK L     + L+ EF+ E++     
Sbjct: 6   NLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKL 65

Query: 455 SNSNAT--IG-----------------ANVKAFVREMKTFSDPTLSALLHWEMRFNIIIG 495
           S+ N    +G                  ++K F+R  K+  +      L  + +  +   
Sbjct: 66  SHKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQ 125

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSKPNEIL 555
           IA G+ +L   S  R +HRDL   N L+  +   K+S   L+ D+ + + +     N ++
Sbjct: 126 IALGMDHL---SNARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYYKLR--NALI 180

Query: 556 KCINVGLLCVQEDPNDRPTMSDV 578
               +    VQED  D  T SDV
Sbjct: 181 PLRWLAPEAVQED--DFSTKSDV 201

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 55.7 bits (134), Expect = 2e-08
 Identities = 47/155 (30%), Positives = 76/155 (49%), Gaps = 29/155 (18%)

Query: 413 LGKGGFGPV------YKAKFPGGQQIAVKRLSSASGQGLEEFKNEI-ETSNSNATIGANV 465
           LGKGGFG V         K    +++  KRL   SG+ +   + EI E  NS   +    
Sbjct: 1   LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNL-- 58

Query: 466 KAFVREMKTFSDPTLSALLHWEMRFNII-IG---------------IARGLLYLHQDSRL 509
            A+  E KT     +S +   +++++I  +G               I  G+L+LH    +
Sbjct: 59  -AYAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHS---M 114

Query: 510 RIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQK 544
            I++RD+K  N+LLD + N ++SD GLA+++ D K
Sbjct: 115 DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK 149

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 55.7 bits (135), Expect = 2e-08
 Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 12/88 (13%)

Query: 468 FVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEM 527
           ++R+  +  +           RF     I   L YLH      IIHRDLK  NILLD++M
Sbjct: 92  YIRKYGSLDEKCT--------RF-YAAEILLALEYLHS---KGIIHRDLKPENILLDKDM 139

Query: 528 NPKISDFGLALDMMDQKLHASSKPNEIL 555
           + KI+DFG A  +       S+K +   
Sbjct: 140 HIKITDFGTAKVLDPNSSPESNKGDATN 167

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 55.9 bits (135), Expect = 2e-08
 Identities = 43/156 (27%), Positives = 68/156 (43%), Gaps = 31/156 (19%)

Query: 405 DNFSEANKLGKGGFGPVYKAKFPGGQQI-AVKRLSSASG-----QGLEEFKNEIETSNSN 458
           +   E ++LG+G  G V K +      I A+K +++        Q L E   EI  S  +
Sbjct: 1   EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILREL--EINKSCKS 58

Query: 459 ATIGANVKAFVRE--------MKTFSDPTLSALLHWEMRFN-----------IIIGIARG 499
             I     AF+ E        M+     +L ++   +++             I   + +G
Sbjct: 59  PYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYK-KVKKRGGRIGEKVLGKIAESVLKG 117

Query: 500 LLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFG 535
           L YLH     +IIHRD+K SNILL ++   K+ DFG
Sbjct: 118 LSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFG 150

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 56.0 bits (136), Expect = 2e-08
 Identities = 24/46 (52%), Positives = 29/46 (63%), Gaps = 3/46 (6%)

Query: 492 IIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            +  I RGL YLH      +IHRDLK SNIL++   + KI DFGLA
Sbjct: 108 FLYQILRGLKYLH---SANVIHRDLKPSNILVNSNCDLKICDFGLA 150

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 55.7 bits (135), Expect = 2e-08
 Identities = 41/171 (23%), Positives = 72/171 (42%), Gaps = 57/171 (33%)

Query: 407 FSEANKLGKGGFGPVYKAKFPGGQQI-AVKRLS-SASGQGLEEFK-NEIETSNSNATIGA 463
           + E  ++G+G +G VYKA+     +  A+K++    S +G+      EI           
Sbjct: 1   YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREI----------- 49

Query: 464 NVKAFVREMKTFSDPTLSALL--------HWEM--------------RF----------- 490
              A ++++++F  P +  LL          E+               +           
Sbjct: 50  ---ALLKQLESFEHPNIVRLLDVCHGPRTDRELKLTLVFEHVDQDLATYLSKCPKPGLPP 106

Query: 491 ----NIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
               +++  + RG+ +LH     RI+HRDLK  NIL+  +   KI+DFGLA
Sbjct: 107 ETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFGLA 154

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 54.3 bits (131), Expect = 5e-08
 Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 26/146 (17%)

Query: 412 KLGKGGFGPVYKAK-FPGGQQIAVKRLS------SASGQGLEEFKNEIETSNSN-----A 459
           K+G+G +G VYKA+    G+ +A+K++             L E K   E ++ N      
Sbjct: 6   KIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLD 65

Query: 460 TIGANVK-AFVREMKTFSDPTLSALLHWEMRF-------NIIIGIARGLLYLHQDSRLRI 511
                     V E   F D  L  L+    R        + +  + +GL + H      I
Sbjct: 66  VFRHKGDLYLVFE---FMDTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSH---GI 119

Query: 512 IHRDLKTSNILLDQEMNPKISDFGLA 537
           +HRDLK  N+L++ E   K++DFGLA
Sbjct: 120 LHRDLKPENLLINTEGVLKLADFGLA 145

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 54.0 bits (130), Expect = 5e-08
 Identities = 40/159 (25%), Positives = 63/159 (39%), Gaps = 46/159 (28%)

Query: 413 LGKGGFGPVYKA-KFPGGQQIAVK----------RLSSASGQGLEEFKNEIET------- 454
           +GKG +G VY A     G+ +AVK          R  S     ++  ++EIET       
Sbjct: 9   IGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHL 68

Query: 455 --------SNSNATI--------GANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIAR 498
                     +   +        G ++ + +R    F +  +               +  
Sbjct: 69  NIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTE---------QVLE 119

Query: 499 GLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           GL YLH      I+HRDLK  N+L+D +   KISDFG++
Sbjct: 120 GLAYLHSKG---ILHRDLKADNLLVDADGICKISDFGIS 155

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 54.5 bits (132), Expect = 6e-08
 Identities = 22/46 (47%), Positives = 31/46 (67%), Gaps = 3/46 (6%)

Query: 492 IIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           I+  + + L Y+H  S   +IHRDLK SNILL+ +   K++DFGLA
Sbjct: 112 IMYQLLKALKYIH--SG-NVIHRDLKPSNILLNSDCRVKLADFGLA 154

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 54.2 bits (131), Expect = 7e-08
 Identities = 42/147 (28%), Positives = 66/147 (44%), Gaps = 28/147 (19%)

Query: 412 KLGKGGFGPVYKAKFPG-GQQIAVKRLSSASGQG------LEEFK--NEIETSNSNATI- 461
           ++G+G  G V+KAK    G+ +A+K+++    +G      L E K     +       + 
Sbjct: 7   RIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLD 66

Query: 462 ----GANVKAFVREMKTFSDPTLSALLHWEMR---FNIIIGIARGLL----YLHQDSRLR 510
               G+     V E   +    LS +L  E R      +    R LL    Y+H      
Sbjct: 67  VFPHGSGF-VLVME---YMPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHA---NG 119

Query: 511 IIHRDLKTSNILLDQEMNPKISDFGLA 537
           I+HRDLK +N+L+  +   KI+DFGLA
Sbjct: 120 IMHRDLKPANLLISADGVLKIADFGLA 146

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 54.0 bits (130), Expect = 8e-08
 Identities = 49/171 (28%), Positives = 68/171 (39%), Gaps = 44/171 (25%)

Query: 407 FSEANKLGKGGFGPVYKAKFPG------GQQIAVKRL-SSASGQGLEEFKNEIET----- 454
           F E   LG+G FG VYK +  G         +A+K L  +A  +  +EF+ E E      
Sbjct: 9   FLEE--LGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQ 66

Query: 455 -SNSNATIGANVKA-----------------FVREMKTFSDPTL--------SALLHWEM 488
             N    +G   K                  F+      SD           S+L   + 
Sbjct: 67  HPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDF 126

Query: 489 RFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALD 539
             +I I IA G+ YL   S    +HRDL   N L+ + +  KISDFGL+ D
Sbjct: 127 -LHIAIQIAAGMEYL---SSHHFVHRDLAARNCLVGEGLTVKISDFGLSRD 173

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 53.6 bits (129), Expect = 9e-08
 Identities = 40/159 (25%), Positives = 68/159 (42%), Gaps = 37/159 (23%)

Query: 404 TDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQGLEEFKNEIE--TSNSNAT 460
            D +    +LG G FG VYKA+    G   A K +   S + LE+F  EI+  +   +  
Sbjct: 4   NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPN 63

Query: 461 I---------------------GANVKAFVREM-KTFSDPTLSALLHWEMRFNIIIGIAR 498
           I                     G  + + + E+ +  ++P +  +            +  
Sbjct: 64  IVGLYEAYFYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQ---------MLE 114

Query: 499 GLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            L +LH     ++IHRDLK  NILL  + + K++DFG++
Sbjct: 115 ALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVS 150

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 53.4 bits (129), Expect = 1e-07
 Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 10/86 (11%)

Query: 480 LSALLHW------EMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISD 533
           L++LL        ++    I  I   L YLH      IIHRDLK  NIL+D   + K++D
Sbjct: 80  LASLLENVGSLDEDVARIYIAEIVLALEYLHS---NGIIHRDLKPDNILIDSNGHLKLTD 136

Query: 534 FGLA-LDMMDQKLHASSKPNEILKCI 558
           FGL+ + ++ ++++ +    E  + +
Sbjct: 137 FGLSKVGLVRRQINLNDDEKEDKRIV 162

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 53.8 bits (130), Expect = 1e-07
 Identities = 45/157 (28%), Positives = 77/157 (49%), Gaps = 32/157 (20%)

Query: 405 DNFSEANKLGKGGFGPVYKAK-FPGGQQIAVKRL---SSASG---QGLEEFKNEIETSNS 457
           D + + N++ +G +G VY+A+    G+ +A+K+L       G     L E    ++  + 
Sbjct: 5   DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHP 64

Query: 458 N------ATIGANVKAF--VRE---------MKTFSDPTLSALLHWEMRFNIIIGIARGL 500
           N        +G+N+     V E         M+T   P L +    E++  +++ +  G+
Sbjct: 65  NIVTVKEVVVGSNLDKIYMVMEYVEHDLKSLMETMKQPFLQS----EVKC-LMLQLLSGV 119

Query: 501 LYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            +LH +    I+HRDLKTSN+LL+     KI DFGLA
Sbjct: 120 AHLHDNW---ILHRDLKTSNLLLNNRGILKICDFGLA 153

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 53.3 bits (128), Expect = 1e-07
 Identities = 49/170 (28%), Positives = 70/170 (41%), Gaps = 50/170 (29%)

Query: 413 LGKGGFGPVYKA-KFPGGQQIAVKR--LSSASGQG-------LEEFKNEIET-------- 454
           +G G FG VY       G+ +AVK+  L S S          L+    EI          
Sbjct: 8   IGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHEN 67

Query: 455 ------SNSNATI---------GANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARG 499
                 S+ +A           G +V A +     F +  +          N +  I +G
Sbjct: 68  IVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGAFEETLVR---------NFVRQILKG 118

Query: 500 LLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASS 549
           L YLH      IIHRD+K +NIL+D +   KISDFG++     +KL A+S
Sbjct: 119 LNYLHNRG---IIHRDIKGANILVDNKGGIKISDFGIS-----KKLEANS 160

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 53.1 bits (128), Expect = 1e-07
 Identities = 40/162 (24%), Positives = 56/162 (34%), Gaps = 60/162 (37%)

Query: 412 KLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVKAFVRE 471
           KLG G FG V+   + G  ++AVK L   +                      + +AF++E
Sbjct: 13  KLGAGQFGEVWMGTWNGTTKVAVKTLKPGT---------------------MSPEAFLQE 51

Query: 472 ---MKTFSDPTLSAL---------------------------------LHWEMRFNIIIG 495
              MK      L  L                                 L      ++   
Sbjct: 52  AQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQ 111

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           IA G+ YL        IHRDL   NIL+ + +  KI+DFGLA
Sbjct: 112 IAEGMAYLE---SRNYIHRDLAARNILVGENLVCKIADFGLA 150

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 53.7 bits (129), Expect = 1e-07
 Identities = 47/175 (26%), Positives = 72/175 (41%), Gaps = 55/175 (31%)

Query: 397 FESILAATDNFSEANKLGKGGFGPVYKAK-FPGGQQIAVKRLSSASGQGLEEFKNEIETS 455
           F ++   T+ + +   +G G FG V  A+    GQ +A+K++       ++ F       
Sbjct: 2   FGTVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKI-------MKPFSTP---- 50

Query: 456 NSNATIGANVKAFVREMK-----------TFSDPTLSAL-------------LH------ 485
                     K   RE+K           + SD  +S L             LH      
Sbjct: 51  -------VLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFVTELLGTDLHRLLTSR 103

Query: 486 -WEMRF--NIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
             E +F    +  I RGL Y+H      ++HRDLK SNIL+++  + KI DFGLA
Sbjct: 104 PLEKQFIQYFLYQILRGLKYVHSAG---VVHRDLKPSNILINENCDLKICDFGLA 155

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 53.1 bits (128), Expect = 1e-07
 Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 57/167 (34%)

Query: 407 FSEANKLGKGGFGPVYKAK-FPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANV 465
           + +  K+G+G +G VYKA+    G+ +A+K++       LE    E E   S A      
Sbjct: 1   YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIR------LET---EDEGVPSTA------ 45

Query: 466 KAFVRE---MKTFSDPTLSAL---LHWEMRFNIII------------------------- 494
              +RE   +K  + P +  L   +H E +  ++                          
Sbjct: 46  ---IREISLLKELNHPNIVRLLDVVHSENKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIK 102

Query: 495 ----GIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
                + +G+ Y H     R++HRDLK  N+L+D+E   K++DFGLA
Sbjct: 103 SYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLA 146

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 53.3 bits (128), Expect = 1e-07
 Identities = 25/49 (51%), Positives = 34/49 (69%), Gaps = 3/49 (6%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQK 544
           I  GL +LHQ    RII+RDLK  N+LLD + N +ISD GLA+++ D +
Sbjct: 106 IISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQ 151

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 53.0 bits (128), Expect = 2e-07
 Identities = 42/162 (25%), Positives = 66/162 (40%), Gaps = 53/162 (32%)

Query: 411 NKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVKAFV 469
            KLG+G +  VYKA+    G+ +A+K++       L E K   +        G N  A  
Sbjct: 6   KKLGEGTYAVVYKARDKETGRIVAIKKIK------LGERKEAKD--------GINFTAL- 50

Query: 470 REMK---------------------------TFSDPTLSALLH-WEMRF------NIIIG 495
           RE+K                            F +  L  ++    +        + ++ 
Sbjct: 51  REIKLLQELKHPNIIGLLDVFGHKSNINLVFEFMETDLEKVIKDKSIVLTPADIKSYMLM 110

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
             RGL YLH      I+HRDLK +N+L+  +   K++DFGLA
Sbjct: 111 TLRGLEYLH---SNWILHRDLKPNNLLIASDGVLKLADFGLA 149

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 52.8 bits (127), Expect = 2e-07
 Identities = 39/147 (26%), Positives = 61/147 (41%), Gaps = 27/147 (18%)

Query: 412 KLGKGGFGPVYKA-KFPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVKAFVR 470
           ++G+GG+G V+ A K   G+ +A+KR+  +    L E    + T     T   + +  V+
Sbjct: 8   QVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNE-VRHVLTERDILTTTKS-EWLVK 65

Query: 471 EMKTFSDP--------------------TLSALLHWEMRFNIIIGIARGLLYLHQDSRLR 510
            +  F D                      L  L     RF +       +  LH    L 
Sbjct: 66  LLYAFQDDEYLYLAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFE-AVDALH---ELG 121

Query: 511 IIHRDLKTSNILLDQEMNPKISDFGLA 537
            IHRDLK  N L+D   + K++DFGL+
Sbjct: 122 YIHRDLKPENFLIDASGHIKLTDFGLS 148

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 52.4 bits (125), Expect = 2e-07
 Identities = 46/159 (28%), Positives = 74/159 (46%), Gaps = 28/159 (17%)

Query: 407 FSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVK 466
           F++  ++GKG FG VYK     G     K + +     LEE ++EIE      T+ +   
Sbjct: 6   FTKLERIGKGSFGEVYK-----GIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCD 60

Query: 467 A--FVREMKTFSDPTL-----------SAL-------LHWEMRFNIIIGIARGLLYLHQD 506
           +    R   ++   T            SAL       L       I+  I +GL YLH +
Sbjct: 61  SPYITRYYGSYLKGTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSE 120

Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKL 545
              R IHRD+K +N+LL ++ + K++DFG+A  + D ++
Sbjct: 121 ---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI 156

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 52.0 bits (125), Expect = 2e-07
 Identities = 44/162 (27%), Positives = 65/162 (40%), Gaps = 41/162 (25%)

Query: 412 KLGKGGFGPVYKAKF--PGGQ--QIAVKRLSSASGQG-LEEFKNEIETSNSN-------- 458
           KLG G FG V + ++   GG+   +AVK L S      +++F  E    +S         
Sbjct: 2   KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRL 61

Query: 459 ---------------ATIGANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYL 503
                          A +G+ +    ++        +S L  + ++      IA G+ YL
Sbjct: 62  YGVVLTHPLMMVTELAPLGSLLDRLRKDALGHF--LISTLCDYAVQ------IANGMRYL 113

Query: 504 HQDSRLRIIHRDLKTSNILLDQEMNPKISDFGL--ALDMMDQ 543
                 R IHRDL   NILL  +   KI DFGL  AL   + 
Sbjct: 114 ESK---RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNED 152

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 52.1 bits (125), Expect = 2e-07
 Identities = 47/156 (30%), Positives = 67/156 (42%), Gaps = 33/156 (21%)

Query: 413 LGKGGFGPVYKAKFPGGQQ--IAVKRLS---SASGQGLEEFKNEIETSNSNATI---GAN 464
           LG G FG VYK +     Q  +A+K ++    A G+   E    I    S  TI      
Sbjct: 8   LGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLR 67

Query: 465 VKAFVREMKTFSD-----------------PTLSALLHWEMRF------NIIIGIARGLL 501
               VR  KTF +                    ++L   + RF      NI + +   L 
Sbjct: 68  HPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALR 127

Query: 502 YLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           YLH++ R  I+HRDL  +NI+L ++    I+DFGLA
Sbjct: 128 YLHKEKR--IVHRDLTPNNIMLGEDDKVTITDFGLA 161

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|219774 pfam08276, PAN_2, PAN-like domain

 Score = 47.3 bits (113), Expect = 4e-07
 Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 5/69 (7%)

Query: 209 CGGKDMFLKRQITKVGETDSCLP--VASEAECSKKCRGFCPCTAYSYKESKRRDEAGTCC 266
           CGG D FL+    K+ +T + +        EC ++C   C CTAY+Y + +       C 
Sbjct: 1   CGGGDGFLRLPNMKLPDTTAAIVDRSIGLKECEQRCLSNCSCTAYAYADIRGG---SGCL 57

Query: 267 IWIEELKDL 275
           IW  EL D+
Sbjct: 58  IWTGELVDM 66

Length = 66

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 51.2 bits (123), Expect = 5e-07
 Identities = 35/146 (23%), Positives = 64/146 (43%), Gaps = 22/146 (15%)

Query: 411 NKLGKGGFGPVYKAK-FPGGQQIAVKRLS-SASGQGLEEFKNEIETSNSNA---TIGANV 465
             +G G    VY A   P  +++A+KR+        ++E + E++  +       +    
Sbjct: 7   EVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYT 66

Query: 466 KAFVRE-----MKTFSDPTLSALLHWEMRF-----NIIIGIARGLL----YLHQDSRLRI 511
              V +     M   S  +L  ++            II  + + +L    YLH + +   
Sbjct: 67  SFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQ--- 123

Query: 512 IHRDLKTSNILLDQEMNPKISDFGLA 537
           IHRD+K  NILL ++ + KI+DFG++
Sbjct: 124 IHRDIKAGNILLGEDGSVKIADFGVS 149

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 51.3 bits (123), Expect = 6e-07
 Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 41/166 (24%)

Query: 413 LGKGGFGPVYKAKF-PGGQQI----AVKRLSSASG-QGLEEFKNE------IETSNSNAT 460
           LG G FG VYK  + P G+++    A+K L   +  +  +E  +E      ++  +    
Sbjct: 15  LGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRL 74

Query: 461 IG----------------ANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLH 504
           +G                  +  +VR  K         LL+W ++      IA+G+ YL 
Sbjct: 75  LGICLSSQVQLITQLMPLGCLLDYVRNHKDNIGSQY--LLNWCVQ------IAKGMSYLE 126

Query: 505 QDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA--LDMMDQKLHAS 548
           +    R++HRDL   N+L+    + KI+DFGLA  LD+ +++ HA 
Sbjct: 127 EK---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAE 169

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 50.8 bits (122), Expect = 6e-07
 Identities = 39/154 (25%), Positives = 58/154 (37%), Gaps = 41/154 (26%)

Query: 411 NKLGKGGFGPVYKAKF--PGGQQI--AVKRLS-SASGQGLEEFKNEIET----SNSN--- 458
            +LG G FG V K  +    G+++  AVK L       G +EF  E        +     
Sbjct: 1   KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVR 60

Query: 459 ----------------ATIGANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLY 502
                           A +G  +K ++++ +      L  L H          +A G+ Y
Sbjct: 61  LIGVCKGEPLMLVMELAPLGPLLK-YLKKRREIPVSDLKELAH---------QVAMGMAY 110

Query: 503 LHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGL 536
           L        +HRDL   N+LL      KISDFG+
Sbjct: 111 LESK---HFVHRDLAARNVLLVNRHQAKISDFGM 141

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 51.2 bits (123), Expect = 6e-07
 Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 24/152 (15%)

Query: 406 NFSEANKLGKGGFGPVYKAK-FPGGQQIAVKRL---SSASG---QGLEEFKNEIETSNSN 458
            F + N++G+G +G VY+A+    G+ +A+K++   +   G     L E    +   + N
Sbjct: 8   EFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPN 67

Query: 459 ------ATIGANVKAFVREMKTFSDPTLSALLHWEMR-FN------IIIGIARGLLYLHQ 505
                   +G ++ +    M+ + +  L++LL      F+      +++ + RGL YLH+
Sbjct: 68  IVELKEVVVGKHLDSIFLVME-YCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHE 126

Query: 506 DSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           +    IIHRDLK SN+LL  +   KI+DFGLA
Sbjct: 127 NF---IIHRDLKVSNLLLTDKGCLKIADFGLA 155

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 51.0 bits (122), Expect = 6e-07
 Identities = 47/160 (29%), Positives = 75/160 (46%), Gaps = 31/160 (19%)

Query: 406 NFSEANKLGKGGFGPVYKAKFPG-GQQIAVKRLS----SASGQG--LEEFKNEIETSNS- 457
            + +  +LG G F   Y+A+    G  +AVK+++    ++S Q   +E  + EI      
Sbjct: 1   EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARL 60

Query: 458 ---------NATI-GANVKAFVREMKTFSDPTLSALLHWEMRF--NIIIG----IARGLL 501
                     AT   ++   FV  M   S   +S LL     F   +II     + RGL 
Sbjct: 61  NHPHIIRMLGATCEDSHFNLFVEWMAGGS---VSHLLSKYGAFKEAVIINYTEQLLRGLS 117

Query: 502 YLHQDSRLRIIHRDLKTSNILLDQE-MNPKISDFGLALDM 540
           YLH++   +IIHRD+K +N+L+D      +I+DFG A  +
Sbjct: 118 YLHEN---QIIHRDVKGANLLIDSTGQRLRIADFGAAARL 154

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3

 Score = 51.1 bits (122), Expect = 6e-07
 Identities = 46/181 (25%), Positives = 70/181 (38%), Gaps = 71/181 (39%)

Query: 407 FSEANKLGKGGFGPVYKAKFP----GGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIG 462
           F+    LGKG FG V +A+        Q++AVK L           K +I +S       
Sbjct: 1   FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKML-----------KADIFSS------- 42

Query: 463 ANVKAFVRE---MKTFSDPTLSALLHWEMR------------------------------ 489
           ++++ F+RE   MK F  P +  L+   +R                              
Sbjct: 43  SDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSR 102

Query: 490 -----FNI--------IIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGL 536
                F +        +I IA G+ YL   S    IHRDL   N +L++ M   ++DFGL
Sbjct: 103 IGEEPFTLPLQTLVRFMIDIASGMEYL---SSKNFIHRDLAARNCMLNENMTVCVADFGL 159

Query: 537 A 537
           +
Sbjct: 160 S 160

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 51.2 bits (123), Expect = 7e-07
 Identities = 44/157 (28%), Positives = 67/157 (42%), Gaps = 23/157 (14%)

Query: 413 LGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQGLEEFK------NEIETSNSNATIGANV 465
           +G G  G VYK +F   G  +AVK++     +  EE K      + +  S+    I    
Sbjct: 23  IGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNK--EENKRILMDLDVVLKSHDCPYIVKCY 80

Query: 466 KAFVRE---------MKTFSDPTLSALLHWEMRF---NIIIGIARGLLYLHQDSRLRIIH 513
             F+ +         M T  D  L  +           + + I + L YL +     +IH
Sbjct: 81  GYFITDSDVFICMELMSTCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHG--VIH 138

Query: 514 RDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSK 550
           RD+K SNILLD   N K+ DFG++  ++D K    S 
Sbjct: 139 RDVKPSNILLDASGNVKLCDFGISGRLVDSKAKTRSA 175

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 51.2 bits (122), Expect = 7e-07
 Identities = 45/159 (28%), Positives = 67/159 (42%), Gaps = 53/159 (33%)

Query: 412 KLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVKAFVR 470
           +LG G FG VYKAK    G   A K + + S + LE++  EIE                 
Sbjct: 19  ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEI---------------- 62

Query: 471 EMKTFSDPTLSALL---HWEMRFNIIIGIARG---------------------------- 499
            + T + P +  LL   +W+ +  I+I    G                            
Sbjct: 63  -LATCNHPYIVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLE 121

Query: 500 -LLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            L YLH    ++IIHRDLK  N+LL  + + K++DFG++
Sbjct: 122 ALQYLHS---MKIIHRDLKAGNVLLTLDGDIKLADFGVS 157

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 50.9 bits (122), Expect = 8e-07
 Identities = 48/176 (27%), Positives = 71/176 (40%), Gaps = 48/176 (27%)

Query: 403 ATDNFSEANKLGKGGFGPVYKAKFPGG------QQIAVKRL-SSASGQGLEEFKNE---I 452
             D+ +    LG G FG VY+  + G        Q+AVK L  S S Q   +F  E   +
Sbjct: 4   PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIM 63

Query: 453 ETSNSNATI--------------------GANVKAFVREMK-TFSDP---TLSALLHWEM 488
              N    +                    G ++K+F+RE +     P   T+  LL    
Sbjct: 64  SKFNHQNIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLF--- 120

Query: 489 RFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNP----KISDFGLALDM 540
                  +A+G  YL ++     IHRD+   N LL  +  P    KI+DFG+A D+
Sbjct: 121 ---CARDVAKGCKYLEEN---HFIHRDIAARNCLLTCK-GPGRVAKIADFGMARDI 169

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 50.7 bits (121), Expect = 8e-07
 Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 10/65 (15%)

Query: 487 EMRF---NIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQ 543
           EMRF    II+G+       H  +R  +++RDLK +NILLD+  + +ISD GLA D   +
Sbjct: 98  EMRFYAAEIILGLE------HMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKK 150

Query: 544 KLHAS 548
           K HAS
Sbjct: 151 KPHAS 155

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 51.1 bits (123), Expect = 8e-07
 Identities = 41/173 (23%), Positives = 66/173 (38%), Gaps = 57/173 (32%)

Query: 407 FSEANKLGKGGFGPVYKAK---FPGGQQIAVKRLSSASGQG-------------LEEFKN 450
           +     +G+G +G VYKAK      G++ A+K+      Q              L E K+
Sbjct: 2   YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKH 61

Query: 451 EIETSNSNATIGANVKAFVREMKTFSDPTLS-----------ALLHWE-----------M 488
           E            NV + V      +D ++             ++ +            M
Sbjct: 62  E------------NVVSLVEVFLEHADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSM 109

Query: 489 RFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNP----KISDFGLA 537
             +++  I  G+ YLH +    ++HRDLK +NIL+  E       KI D GLA
Sbjct: 110 VKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVKIGDLGLA 159

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 50.5 bits (120), Expect = 8e-07
 Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 28/159 (17%)

Query: 407 FSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVK 466
           F++  K+GKG FG V+K      Q++   ++       LEE ++EIE      T+ +   
Sbjct: 6   FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIID-----LEEAEDEIEDIQQEITVLSQCD 60

Query: 467 A-FVREM--KTFSDPTLSALLHW----------------EMRFNIII-GIARGLLYLHQD 506
           + +V +       D  L  ++ +                E +   I+  I +GL YLH +
Sbjct: 61  SPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSE 120

Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKL 545
            +   IHRD+K +N+LL +    K++DFG+A  + D ++
Sbjct: 121 KK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI 156

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 50.6 bits (121), Expect = 9e-07
 Identities = 41/150 (27%), Positives = 75/150 (50%), Gaps = 21/150 (14%)

Query: 406 NFSEANKLGKGGFGPVYKAK-FPGGQQIAVK--RLSSAS----GQGLEEFKNEIETSNSN 458
           NF +  K+G+G +G VYKA+    G+ +A+K  RL + +       + E     E ++ N
Sbjct: 1   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 60

Query: 459 AT-----IGANVKAFV------REMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDS 507
                  I    K ++      +++K F D +  + +   +  + +  + +GL + H   
Sbjct: 61  IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSH- 119

Query: 508 RLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
             R++HRDLK  N+L++ E   K++DFGLA
Sbjct: 120 --RVLHRDLKPQNLLINTEGAIKLADFGLA 147

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 50.8 bits (122), Expect = 9e-07
 Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 38/161 (23%)

Query: 405 DNFSEANKLGKGGFGPVYKAKFPG-GQQIAVKRLSSASGQGLEEFKNEI-------ETS- 455
           D +   + +G G +G V  A     G+++A+K+LS         F++ I       E   
Sbjct: 15  DRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLS-------RPFQSAIHAKRTYRELRL 67

Query: 456 ----NSNATIGA-NVKAFVREMKTFSD-----PTLSALLHWEMRFN---------IIIGI 496
               +    IG  +V      ++ F D       + A L+  ++           ++  I
Sbjct: 68  LKHMDHENVIGLLDVFTPASSLEDFQDVYLVTHLMGADLNNIVKCQKLSDDHIQFLVYQI 127

Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            RGL Y+H      IIHRDLK SNI ++++   KI DFGLA
Sbjct: 128 LRGLKYIHS---AGIIHRDLKPSNIAVNEDCELKILDFGLA 165

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 50.4 bits (121), Expect = 1e-06
 Identities = 22/42 (52%), Positives = 29/42 (69%), Gaps = 3/42 (7%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           I RGL Y+H  +   ++HRDLK SN+LL+   + KI DFGLA
Sbjct: 115 ILRGLKYIHSAN---VLHRDLKPSNLLLNTNCDLKICDFGLA 153

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 50.0 bits (119), Expect = 1e-06
 Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 10/65 (15%)

Query: 487 EMRF---NIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQ 543
           EMRF    II+G+       H  +R  +++RDLK +NILLD+  + +ISD GLA D   +
Sbjct: 98  EMRFYATEIILGLE------HMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKK 150

Query: 544 KLHAS 548
           K HAS
Sbjct: 151 KPHAS 155

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 49.7 bits (118), Expect = 1e-06
 Identities = 41/157 (26%), Positives = 67/157 (42%), Gaps = 26/157 (16%)

Query: 407 FSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEI---ETSNSNATIGA 463
           F     +G G +G VYK +     Q+A  ++   +G   EE K EI   +  + +  I  
Sbjct: 8   FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIAT 67

Query: 464 NVKAFVREMKTFSDPTLSALLHW--------------------EMRFNIIIGIARGLLYL 503
              AF+++     D  L  ++ +                    E    I   I RGL +L
Sbjct: 68  YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHL 127

Query: 504 HQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM 540
           HQ    ++IHRD+K  N+LL +    K+ DFG++  +
Sbjct: 128 HQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 161

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 49.6 bits (119), Expect = 1e-06
 Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 3/50 (6%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKL 545
           I   L YLH      IIHRD+K  NILLD++ +  I+DF +A  +    L
Sbjct: 109 IVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTL 155

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 49.5 bits (119), Expect = 2e-06
 Identities = 42/151 (27%), Positives = 57/151 (37%), Gaps = 37/151 (24%)

Query: 413 LGKGGFGPVYKAKF-PGGQQIAVKRLSSAS--GQGLEE-FKNEIET--SNSNATIGANVK 466
           LG GGFG V   K     +  A+K +        G +E   +E E     ++  I     
Sbjct: 1   LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFI----- 55

Query: 467 AFVREMKTFSDPT-------------LSALLH-------WEMRFNIIIGIARGLLYLHQD 506
             V+  +TF D               L  +L        +  RF  I  +     YLH  
Sbjct: 56  --VKLYRTFKDKKYIYMLMEYCLGGELWTILRDRGLFDEYTARF-YIACVVLAFEYLH-- 110

Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
               II+RDLK  N+LLD     K+ DFG A
Sbjct: 111 -NRGIIYRDLKPENLLLDSNGYVKLVDFGFA 140

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 49.7 bits (118), Expect = 2e-06
 Identities = 46/152 (30%), Positives = 72/152 (47%), Gaps = 37/152 (24%)

Query: 413 LGKGGFGPVYKAKF-PGGQQI----AVKRLSSASG-QGLEEFKNEIETSNSNATIGANVK 466
           LG G FG VYK  + P G+ +    A+K L+  +G +   EF +E       A I A++ 
Sbjct: 15  LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDE-------ALIMASMD 67

Query: 467 A--FVREMKTFSDPTLS---------ALLHW----------EMRFNIIIGIARGLLYLHQ 505
               VR +     PT+           LL +          ++  N  + IA+G++YL +
Sbjct: 68  HPHLVRLLGVCLSPTIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEE 127

Query: 506 DSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
               R++HRDL   N+L+    + KI+DFGLA
Sbjct: 128 R---RLVHRDLAARNVLVKSPNHVKITDFGLA 156

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 49.6 bits (119), Expect = 2e-06
 Identities = 19/42 (45%), Positives = 30/42 (71%), Gaps = 3/42 (7%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           + RGL Y+H  +   +IHRDLK SN+L++++   +I DFG+A
Sbjct: 116 LLRGLKYIHSAN---VIHRDLKPSNLLVNEDCELRIGDFGMA 154

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 49.3 bits (118), Expect = 2e-06
 Identities = 46/150 (30%), Positives = 65/150 (43%), Gaps = 30/150 (20%)

Query: 411 NKLGKGGFGPVYKA-KFPGGQQIAVK--RLSSASGQGLEEFKNEIET------SNSNATI 461
           NK+G G FG VY A     G+ +AVK  R+     + ++E  +E++        N     
Sbjct: 6   NKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYY 65

Query: 462 GANVKAFVRE-----MKTFSDPTLSALLHWE--------MRFNIIIGIARGLLYLHQDSR 508
           G  V    RE     M+  S  TL  LL             +   + +  GL YLH    
Sbjct: 66  GVEVH---REKVYIFMEYCSGGTLEELLEHGRILDEHVIRVY--TLQLLEGLAYLHSH-- 118

Query: 509 LRIIHRDLKTSNILLDQEMNPKISDFGLAL 538
             I+HRD+K +NI LD     K+ DFG A+
Sbjct: 119 -GIVHRDIKPANIFLDHNGVIKLGDFGCAV 147

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 49.3 bits (118), Expect = 2e-06
 Identities = 41/169 (24%), Positives = 68/169 (40%), Gaps = 41/169 (24%)

Query: 413 LGKGGFGPVYKA------KFPGGQQIAVKRL-SSASGQGLEEFKNEIET-------SNSN 458
           LG+G FG V KA             +AVK L   A+ + L +  +E+E         N  
Sbjct: 20  LGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNII 79

Query: 459 ATIGA-----------------NVKAFVREMK---TFSDPTLSALLHWEMRFNIIIG--- 495
             +G                  N++ F+R  +    ++ P         +    ++    
Sbjct: 80  NLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAY 139

Query: 496 -IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQ 543
            +ARG+ +L      + IHRDL   N+L+ ++   KI+DFGLA D+   
Sbjct: 140 QVARGMEFLASK---KCIHRDLAARNVLVTEDHVMKIADFGLARDIHHI 185

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 49.2 bits (118), Expect = 2e-06
 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 2/61 (3%)

Query: 491 NIIIGIARGLLYLH--QDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHAS 548
            I+  +   L   H   D    ++HRDLK +NI LD   N K+ DFGLA  +      A 
Sbjct: 109 RILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFAK 168

Query: 549 S 549
           +
Sbjct: 169 T 169

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 49.4 bits (118), Expect = 2e-06
 Identities = 45/179 (25%), Positives = 73/179 (40%), Gaps = 46/179 (25%)

Query: 405 DNFSEANKLGKGGFGPVYKAKFPG---GQQ---IAVKRLSS-ASGQGLEEFKNEI----E 453
           +N      +G+G FG V++A+ PG    +    +AVK L   AS     +F+ E     E
Sbjct: 5   NNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 64

Query: 454 TSNSNAT--IG-----------------ANVKAFVREMKTFSDPTLSAL----------- 483
             + N    +G                  ++  F+R     +  +LS             
Sbjct: 65  FDHPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNP 124

Query: 484 --LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM 540
             L    +  I   +A G+ YL   S  + +HRDL T N L+ + M  KI+DFGL+ ++
Sbjct: 125 LPLSCTEQLCIAKQVAAGMAYL---SERKFVHRDLATRNCLVGENMVVKIADFGLSRNI 180

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 49.2 bits (117), Expect = 3e-06
 Identities = 48/184 (26%), Positives = 71/184 (38%), Gaps = 45/184 (24%)

Query: 395 IDFESILAATDNFSEANKLGKGGFGPVYK-AKFPGGQQIAVKRLSSASGQGLE-EFKNEI 452
           +  ES+   TD +     +GKG +G VYK      G   AVK L   S    E E +  I
Sbjct: 12  LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNI 71

Query: 453 ETSNSN-------------------------------ATIGANVKAFVREMKTFSDPTLS 481
             S  N                                ++   VK  +   +   +  +S
Sbjct: 72  LQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMIS 131

Query: 482 ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMM 541
            +L+         G   GL +LH +   RIIHRD+K +NILL  E   K+ DFG++  + 
Sbjct: 132 YILY---------GALLGLQHLHNN---RIIHRDVKGNNILLTTEGGVKLVDFGVSAQLT 179

Query: 542 DQKL 545
             +L
Sbjct: 180 STRL 183

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 48.9 bits (116), Expect = 3e-06
 Identities = 44/160 (27%), Positives = 79/160 (49%), Gaps = 30/160 (18%)

Query: 407 FSEANKLGKGGFGPVYKAKFPGGQQI-AVKRLSSASGQGLEEFKNEIETSNSNATIGANV 465
           F++  ++GKG FG V+K      QQ+ A+K +       LEE ++EIE      T+ +  
Sbjct: 6   FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIID------LEEAEDEIEDIQQEITVLSQC 59

Query: 466 KA-FVRE--------------MKTFSDPTLSALLHW----EMRFNIIIG-IARGLLYLHQ 505
            + +V +              M+     +   LL      E +   ++  I +GL YLH 
Sbjct: 60  DSPYVTKYYGSYLKGTKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHS 119

Query: 506 DSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKL 545
           + +   IHRD+K +N+LL ++ + K++DFG+A  + D ++
Sbjct: 120 EKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI 156

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 49.5 bits (118), Expect = 3e-06
 Identities = 21/48 (43%), Positives = 24/48 (50%), Gaps = 3/48 (6%)

Query: 490 FNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
             I   I  GL YLH     RIIHRD+KT NI ++      I D G A
Sbjct: 160 LIIEKQILEGLRYLHA---QRIIHRDVKTENIFINDVDQVCIGDLGAA 204

Length = 357

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 49.3 bits (118), Expect = 3e-06
 Identities = 21/41 (51%), Positives = 28/41 (68%), Gaps = 3/41 (7%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGL 536
           I  GL +LH+     II+RDLK  N+LLD E + KI+DFG+
Sbjct: 105 IVLGLQFLHERG---IIYRDLKLDNVLLDSEGHIKIADFGM 142

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 48.8 bits (117), Expect = 3e-06
 Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 3/49 (6%)

Query: 492 IIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM 540
           I+    RGL YLH++   ++IHRD+K  NILL +    K+ DFG++  +
Sbjct: 118 ILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVDFGVSAQL 163

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 48.9 bits (116), Expect = 3e-06
 Identities = 47/155 (30%), Positives = 71/155 (45%), Gaps = 29/155 (18%)

Query: 407 FSEANKLGKGGFGPV------YKAKFPGGQQIAVKRLSSASGQGLEEFKNEI-ETSNSNA 459
           F +   LGKGGFG V         K    +++  KR+    G+ +   + +I E  NS  
Sbjct: 2   FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRF 61

Query: 460 TIGANVKAFVREMKTFSDPTLSALLHWEMRFNII-IG---------------IARGLLYL 503
            +     A+  E K      L+ +   +++F+I  +G               I  GL  L
Sbjct: 62  VVSL---AYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDL 118

Query: 504 HQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLAL 538
           HQ+   RI++RDLK  NILLD   + +ISD GLA+
Sbjct: 119 HQE---RIVYRDLKPENILLDDHGHIRISDLGLAV 150

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 48.8 bits (116), Expect = 3e-06
 Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 29/152 (19%)

Query: 412 KLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQG---------------LEEFK--NEIE 453
           ++G G +G VYKA+ P  G  +A+K +   + +                LE F   N + 
Sbjct: 7   EIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVR 66

Query: 454 TSNSNATIGANVKAFV--------REMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQ 505
             +  AT   + +  V        ++++T+ D      L  E   +++    RGL +LH 
Sbjct: 67  LMDVCATSRTDRETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHA 126

Query: 506 DSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           +    I+HRDLK  NIL+      K++DFGLA
Sbjct: 127 N---CIVHRDLKPENILVTSGGQVKLADFGLA 155

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 49.3 bits (118), Expect = 3e-06
 Identities = 21/42 (50%), Positives = 29/42 (69%), Gaps = 3/42 (7%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           + RGL Y+H  +   ++HRDLK SN+LL+   + KI DFGLA
Sbjct: 117 LLRGLKYIHSAN---VLHRDLKPSNLLLNANCDLKICDFGLA 155

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 48.6 bits (116), Expect = 4e-06
 Identities = 45/169 (26%), Positives = 72/169 (42%), Gaps = 58/169 (34%)

Query: 406 NFSEANKLGKGGFGPVYKAKFPG-GQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGAN 464
           ++++  K+G+G +G VYK +    GQ +A+K++       LE   +E E   S A     
Sbjct: 1   DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIR------LE---SEEEGVPSTA----- 46

Query: 465 VKAFVRE---MKTFSDPT---LSALLHWEMRFNIII------------------------ 494
               +RE   +K    P    L  +L  E R  +I                         
Sbjct: 47  ----IREISLLKELQHPNIVCLQDVLMQESRLYLIFEFLSMDLKKYLDSLPKGQYMDAEL 102

Query: 495 ------GIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
                  I +G+L+ H     R++HRDLK  N+L+D +   K++DFGLA
Sbjct: 103 VKSYLYQILQGILFCH---SRRVLHRDLKPQNLLIDNKGVIKLADFGLA 148

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 49.0 bits (117), Expect = 4e-06
 Identities = 21/41 (51%), Positives = 28/41 (68%), Gaps = 3/41 (7%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGL 536
           IA GL +LH      II+RDLK  N++LD E + KI+DFG+
Sbjct: 110 IAIGLFFLHSKG---IIYRDLKLDNVMLDAEGHIKIADFGM 147

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 48.5 bits (115), Expect = 4e-06
 Identities = 38/151 (25%), Positives = 69/151 (45%), Gaps = 19/151 (12%)

Query: 412 KLGKGGFGPVYKAKFPGGQQIAVKRLSSAS---------GQGLEEFKNEIETSNSNATIG 462
           KLG+G FG V+   + G  ++A+K L   +          Q +++ ++E +     A + 
Sbjct: 13  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE-KLVQLYAVVS 71

Query: 463 ANVKAFVREMKT------FSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDL 516
                 V E  +      F    +   L      ++   IA G+ Y+    R+  +HRDL
Sbjct: 72  EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 128

Query: 517 KTSNILLDQEMNPKISDFGLALDMMDQKLHA 547
           + +NIL+ + +  K++DFGLA  + D +  A
Sbjct: 129 RAANILVGENLVCKVADFGLARLIEDNEYTA 159

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 48.2 bits (115), Expect = 5e-06
 Identities = 43/167 (25%), Positives = 68/167 (40%), Gaps = 41/167 (24%)

Query: 413 LGKGGFGPVYKA-KFPGGQQIAVKRLS----SASGQG-LEEFKNEI-------------- 452
           LG G FG VY+      G   AVK +S      +GQ  +++ + EI              
Sbjct: 8   LGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQY 67

Query: 453 ---ETSNSNATI------GANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYL 503
              E    N  I      G ++   +++  +F +P +               I  GL YL
Sbjct: 68  LGTEREEDNLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTR---------QILLGLEYL 118

Query: 504 HQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSK 550
           H       +HRD+K +NIL+D     K++DFG+A  +++     S K
Sbjct: 119 HDR---NTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAKSFK 162

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 48.6 bits (116), Expect = 5e-06
 Identities = 25/54 (46%), Positives = 36/54 (66%), Gaps = 3/54 (5%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASS 549
           +A  L +LH    L II+RDLK  NILLD+E + K++DFGL+ + +D +  A S
Sbjct: 107 LALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS 157

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 48.6 bits (116), Expect = 5e-06
 Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 4/52 (7%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA-LDMMDQKLH 546
           I RGL YLH      I+HRD+K  N+L++     KI DFGLA ++  D+  H
Sbjct: 112 ILRGLKYLHS---AGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESKH 160

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 48.5 bits (116), Expect = 6e-06
 Identities = 22/43 (51%), Positives = 30/43 (69%), Gaps = 3/43 (6%)

Query: 499 GLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMM 541
           GL YLH++   +I++RDLK  N+LLD E   KI+DFGL  + M
Sbjct: 113 GLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLCKEGM 152

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 47.8 bits (114), Expect = 6e-06
 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 3/67 (4%)

Query: 483 LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD 542
           L   EM    +  I   + Y+H+     I+HRD+KT NI L +    K+ DFG++  +  
Sbjct: 97  LFEEEMVLWYLFQIVSAVSYIHKAG---ILHRDIKTLNIFLTKAGLIKLGDFGISKILGS 153

Query: 543 QKLHASS 549
           +   A +
Sbjct: 154 EYSMAET 160

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 48.0 bits (114), Expect = 6e-06
 Identities = 44/151 (29%), Positives = 59/151 (39%), Gaps = 34/151 (22%)

Query: 413 LGKGGFGPV----YKAKFPG-GQQIAVKRLSSASGQGLEE-FKNEIETSNS--NATI--- 461
           LG+G FG V    Y     G G+ +AVK L    GQ     +K EI    +  +  I   
Sbjct: 12  LGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKY 71

Query: 462 -------GANVKAFVREMKTFSDPTLSALLHWEMRFNIIIG--------IARGLLYLHQD 506
                  G      + E        L +L  +  +  + +         I  G+ YLH  
Sbjct: 72  KGCCSEQGGKGLQLIMEYVP-----LGSLRDYLPKHKLNLAQLLLFAQQICEGMAYLHSQ 126

Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
                IHRDL   N+LLD +   KI DFGLA
Sbjct: 127 ---HYIHRDLAARNVLLDNDRLVKIGDFGLA 154

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 48.3 bits (115), Expect = 7e-06
 Identities = 20/42 (47%), Positives = 29/42 (69%), Gaps = 3/42 (7%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           I  G+ YLH   R  I+HRD+K SN+L++   N KI+DFG++
Sbjct: 177 ILSGIAYLH---RRHIVHRDIKPSNLLINSAKNVKIADFGVS 215

Length = 353

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 48.1 bits (115), Expect = 8e-06
 Identities = 21/49 (42%), Positives = 29/49 (59%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQK 544
           IA  +L L    +L  IHRD+K  NIL+D + + K++DFGL   M   K
Sbjct: 107 IAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAK 155

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 47.1 bits (112), Expect = 1e-05
 Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 3/42 (7%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           I  G+ YLH +    I+HRD+K +NIL D   N K+ DFG +
Sbjct: 113 ILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGAS 151

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 46.9 bits (112), Expect = 1e-05
 Identities = 41/161 (25%), Positives = 61/161 (37%), Gaps = 57/161 (35%)

Query: 413 LGKGGFGPVYKA--KFPGGQQI--AVKRL-SSASGQGLEEFKNEIETSNSNATIGANVKA 467
           +G G FG V +   K PG ++I  A+K L + +S +   +F  E       A+I      
Sbjct: 12  IGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTE-------ASI------ 58

Query: 468 FVREMKTFSDPTLSAL--------------------------------LHWEMRFNIIIG 495
               M  F  P +  L                                        ++ G
Sbjct: 59  ----MGQFDHPNIIRLEGVVTKSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRG 114

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGL 536
           IA G+ YL   S +  +HRDL   NIL++  +  K+SDFGL
Sbjct: 115 IASGMKYL---SEMNYVHRDLAARNILVNSNLVCKVSDFGL 152

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 47.1 bits (112), Expect = 1e-05
 Identities = 45/167 (26%), Positives = 66/167 (39%), Gaps = 35/167 (20%)

Query: 412 KLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGL-EEFKNEIET----SNSNAT------ 460
           K+GKG FG VYK    G  ++AVK   S     L  +F  E E      + N        
Sbjct: 2   KIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVC 61

Query: 461 -------------IGANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDS 507
                         G ++  F+R+ K  +  T+  LL       + +  A G+ YL   +
Sbjct: 62  VQKQPIYIVMELVPGGSLLTFLRKKK--NRLTVKKLLQ------MSLDAAAGMEYLESKN 113

Query: 508 RLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSKPNEI 554
               IHRDL   N L+ +    KISDFG++ +        S    +I
Sbjct: 114 ---CIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQI 157

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2

 Score = 46.9 bits (111), Expect = 1e-05
 Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 11/67 (16%)

Query: 483 LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA--LDM 540
           LL+W       + IA+G+ YL +   +R++HRDL   N+L+    + KI+DFGLA  LD+
Sbjct: 111 LLNW------CVQIAKGMSYLEE---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDI 161

Query: 541 MDQKLHA 547
            + + HA
Sbjct: 162 DETEYHA 168

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 47.1 bits (113), Expect = 1e-05
 Identities = 46/159 (28%), Positives = 65/159 (40%), Gaps = 51/159 (32%)

Query: 412 KLGKGGFGPVYKAK-FPGGQQIAVKRL--SSASGQGLEEFKNEIE-----TSNSNATIGA 463
           +LG G FG VY A+    G+ +A+K++     S    EE  N  E       N +  I  
Sbjct: 6   QLGDGTFGSVYLARNKETGELVAIKKMKKKFYS---WEECMNLREVKSLRKLNEHPNI-- 60

Query: 464 NVKA-----------FV--------------REMKTFSDPTLSALLHWEMRFNIIIGIAR 498
            VK            FV              R+ K FS+  +          +II  I +
Sbjct: 61  -VKLKEVFRENDELYFVFEYMEGNLYQLMKDRKGKPFSESVI---------RSIIYQILQ 110

Query: 499 GLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           GL ++H   +    HRDLK  N+L+      KI+DFGLA
Sbjct: 111 GLAHIH---KHGFFHRDLKPENLLVSGPEVVKIADFGLA 146

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 47.1 bits (112), Expect = 1e-05
 Identities = 45/164 (27%), Positives = 73/164 (44%), Gaps = 46/164 (28%)

Query: 405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGA 463
           D + +  K+G+G +G VYKA+     + IA+K++       LE+   E E   S A    
Sbjct: 2   DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIR------LEQ---EDEGVPSTAI--- 49

Query: 464 NVKAFVREMKTFSDPTLSALLHWEMRFNIII----------------------------- 494
              + ++EM+  +   L  ++H E R  ++                              
Sbjct: 50  REISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLY 109

Query: 495 GIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNP-KISDFGLA 537
            I RG+ Y H     R++HRDLK  N+L+D+  N  K++DFGLA
Sbjct: 110 QILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGLA 150

Length = 294

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 47.2 bits (113), Expect = 1e-05
 Identities = 45/151 (29%), Positives = 64/151 (42%), Gaps = 37/151 (24%)

Query: 413 LGKGGFGPVYKAKFPGGQQI-AVKRLSSA----SGQGLEEFKNEIETSNSNATIGANVKA 467
           LG G FG V   +  G  +  A+K LS A      Q +E   NE     S       ++ 
Sbjct: 9   LGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQ-VEHVLNEKRILQS-------IRH 60

Query: 468 -F-VREMKTFSDPT-LSALLHW----EM--------RFNIIIG------IARGLLYLHQD 506
            F V    +F D + L  ++ +    E+        RF   +       +   L YLH  
Sbjct: 61  PFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHS- 119

Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
             L I++RDLK  N+LLD +   KI+DFG A
Sbjct: 120 --LDIVYRDLKPENLLLDSDGYIKITDFGFA 148

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

 Score = 47.0 bits (112), Expect = 1e-05
 Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 3/47 (6%)

Query: 494 IGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM 540
           I IA G+ YLH   +  +IH+D+   N ++D+E+  KI+D  L+ D+
Sbjct: 124 IQIACGMSYLH---KRGVIHKDIAARNCVIDEELQVKITDNALSRDL 167

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 46.4 bits (110), Expect = 2e-05
 Identities = 40/147 (27%), Positives = 62/147 (42%), Gaps = 31/147 (21%)

Query: 412 KLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETSNS---------NATIG 462
           KLG G FG V+   + G  ++A+K L   S    E F  E                A + 
Sbjct: 13  KLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVVT 71

Query: 463 ANVKAFVRE----------MKT--FSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLR 510
                 + E          +KT      T++ L+      ++   IA G+ ++    R  
Sbjct: 72  QEPIYIITEYMENGSLVDFLKTPEGIKLTINKLI------DMAAQIAEGMAFIE---RKN 122

Query: 511 IIHRDLKTSNILLDQEMNPKISDFGLA 537
            IHRDL+ +NIL+ + +  KI+DFGLA
Sbjct: 123 YIHRDLRAANILVSETLCCKIADFGLA 149

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional

 Score = 47.1 bits (112), Expect = 2e-05
 Identities = 26/63 (41%), Positives = 30/63 (47%), Gaps = 9/63 (14%)

Query: 488 MRFNIIIGIARGLL----YLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA--LDMM 541
           +     I I R LL    YLH      IIHRD+KT NI LD+  N  + DFG A  LD  
Sbjct: 182 LPLEQAITIQRRLLEALAYLHGRG---IIHRDVKTENIFLDEPENAVLGDFGAACKLDAH 238

Query: 542 DQK 544
              
Sbjct: 239 PDT 241

Length = 392

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 47.0 bits (111), Expect = 2e-05
 Identities = 41/158 (25%), Positives = 67/158 (42%), Gaps = 39/158 (24%)

Query: 407 FSEANKLGKGGFGPVYKAK-FPGGQQIAVKRLSSASGQGLEE---------FKNEIETSN 456
           F++  ++G G FG VY A+     + +A+K++S +  Q  E+         F   I+  N
Sbjct: 27  FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPN 86

Query: 457 S-----------------NATIGANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARG 499
           S                    +G+         K   +  ++A+ H         G  +G
Sbjct: 87  SIEYKGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITH---------GALQG 137

Query: 500 LLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           L YLH  +   +IHRD+K  NILL +    K++DFG A
Sbjct: 138 LAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSA 172

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 47.6 bits (113), Expect = 2e-05
 Identities = 30/76 (39%), Positives = 41/76 (53%), Gaps = 16/76 (21%)

Query: 480 LSALLHW------EMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISD 533
           + +LLH       EM    I  +A  L YLH+     IIHRDLK  N+L+  E + K++D
Sbjct: 91  VKSLLHIYGYFDEEMAVKYISEVALALDYLHRHG---IIHRDLKPDNMLISNEGHIKLTD 147

Query: 534 FGLA-------LDMMD 542
           FGL+       L+MMD
Sbjct: 148 FGLSKVTLNRELNMMD 163

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 46.3 bits (110), Expect = 2e-05
 Identities = 40/159 (25%), Positives = 63/159 (39%), Gaps = 39/159 (24%)

Query: 413 LGKGGFGPVYKAKF--PGG--QQIAVK--RLSSASGQGLEEFKNE------IETSNSNAT 460
           LG+G FG V + +     G   ++AVK  +L   +   +EEF +E       +  N    
Sbjct: 7   LGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKL 66

Query: 461 IGANVKAFVREMKTFSDP----------------------TLSALLHWEMRFNIIIGIAR 498
           IG   +A    ++    P                       L   L  +     ++ IA 
Sbjct: 67  IGVCFEA--SSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIAL 124

Query: 499 GLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           G+ YL   S    IHRDL   N +L ++M   ++DFGL+
Sbjct: 125 GMEYL---SNRNFIHRDLAARNCMLREDMTVCVADFGLS 160

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 46.3 bits (110), Expect = 2e-05
 Identities = 40/169 (23%), Positives = 62/169 (36%), Gaps = 50/169 (29%)

Query: 413 LGKGGFGPVYKAK----FPGGQ--QIAVKRLSSASGQGLEE-FKNEIETSNS-------- 457
           LG+G FG V+  +     P      +AVK L   +     + F+ E E   +        
Sbjct: 13  LGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVK 72

Query: 458 -----------------------NATIGANVKAFVREMKTFSDP---TLSALLHWEMRFN 491
                                  N  + ++           S     TLS LL       
Sbjct: 73  FYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQ------ 126

Query: 492 IIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM 540
           I + IA G++YL   +    +HRDL T N L+  ++  KI DFG++ D+
Sbjct: 127 IAVQIASGMVYL---ASQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDV 172

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 46.2 bits (110), Expect = 3e-05
 Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 3/40 (7%)

Query: 498 RGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           RGL Y HQ    R++HRDLK  N+L+ +    K++DFGLA
Sbjct: 114 RGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLA 150

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 46.2 bits (110), Expect = 3e-05
 Identities = 41/176 (23%), Positives = 60/176 (34%), Gaps = 70/176 (39%)

Query: 413 LGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIG--------AN 464
           LG+G FG VY+           K +      G  E +  I+T N NA++         A+
Sbjct: 14  LGQGSFGMVYEG--------LAKGVVK----GEPETRVAIKTVNENASMRERIEFLNEAS 61

Query: 465 V-KAF--------------------VREMKTFSD--------------------PTLSAL 483
           V K F                    V E+    D                    PTL   
Sbjct: 62  VMKEFNCHHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKF 121

Query: 484 LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALD 539
           +           IA G+ YL      + +HRDL   N ++ +++  KI DFG+  D
Sbjct: 122 IQM------AAEIADGMAYLAA---KKFVHRDLAARNCMVAEDLTVKIGDFGMTRD 168

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 46.0 bits (109), Expect = 3e-05
 Identities = 47/154 (30%), Positives = 66/154 (42%), Gaps = 28/154 (18%)

Query: 404 TDNFSEANKLGKGGFGPVYKAKFPGGQ-QIAVKRLSSASGQGLEEFKNEI----ETSNSN 458
            D   E   LGKG +G VY A+    Q +IA+K +     + ++    EI       + N
Sbjct: 7   YDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRN 66

Query: 459 -------ATIGANVKAFVREMKTFSDPTLSALLH--W---EMRFNIII----GIARGLLY 502
                   +     K F   M+     +LSALL   W   +     II     I  GL Y
Sbjct: 67  IVQYLGSDSENGFFKIF---MEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKY 123

Query: 503 LHQDSRLRIIHRDLKTSNILLDQEMNP-KISDFG 535
           LH     +I+HRD+K  N+L++      KISDFG
Sbjct: 124 LHD---NQIVHRDIKGDNVLVNTYSGVVKISDFG 154

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 45.7 bits (108), Expect = 3e-05
 Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 29/157 (18%)

Query: 407 FSEANKLGKGGFGPV------YKAKFPGGQQIAVKRLSSASGQGLEEFKNEI-ETSNSNA 459
           F +   LGKGGFG V         K    +++  KR+    G+ +   + +I E  NS  
Sbjct: 2   FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQF 61

Query: 460 TIGANVKAFVREMKTFSDPTLSALLHWEMRFNII-IG---------------IARGLLYL 503
            +     A+  E K      L+ +   +++F+I  +G               I  GL  L
Sbjct: 62  VVNL---AYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDL 118

Query: 504 HQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM 540
           H+++    ++RDLK  NILLD   + +ISD GLA+ +
Sbjct: 119 HREN---TVYRDLKPENILLDDYGHIRISDLGLAVKI 152

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 45.6 bits (108), Expect = 3e-05
 Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 4/52 (7%)

Query: 487 EMRFNIIIG-IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           E    + I  I   L +LHQ   L II+RD+K  NILLD E +  ++DFGL+
Sbjct: 104 ESEVRVYIAEIVLALDHLHQ---LGIIYRDIKLENILLDSEGHVVLTDFGLS 152

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 45.9 bits (109), Expect = 4e-05
 Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 7/54 (12%)

Query: 498 RGLLYLHQDSRLRIIHRDLKTSNILLDQE-MNPKISDFGLALDMMDQKLHASSK 550
           RGL Y+H  +   ++HRDLK +N+ ++ E +  KI DFGLA  ++D   H S K
Sbjct: 125 RGLKYIHSAN---VLHRDLKPANVFINTEDLVLKIGDFGLA-RIVDP--HYSHK 172

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 45.6 bits (108), Expect = 4e-05
 Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 2/46 (4%)

Query: 492 IIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           I + +  GL YL+  +  RI+HRD+K SNIL++     K+ DFG++
Sbjct: 108 IAVAVVEGLTYLY--NVHRIMHRDIKPSNILVNSRGQIKLCDFGVS 151

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 45.8 bits (108), Expect = 4e-05
 Identities = 46/167 (27%), Positives = 71/167 (42%), Gaps = 24/167 (14%)

Query: 398 ESILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSA------SGQGLEEFKN 450
           ++I    + +   + +G G +G V  A     G ++AVK+LS        + +   E + 
Sbjct: 10  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 69

Query: 451 EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI--------------IIGI 496
                + N     +V    R ++ F+D  L   L      NI              I  I
Sbjct: 70  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 129

Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQ 543
            RGL Y+H      IIHRDLK SN+ ++++   KI DFGLA    D+
Sbjct: 130 LRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 173

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 45.4 bits (107), Expect = 5e-05
 Identities = 38/153 (24%), Positives = 72/153 (47%), Gaps = 30/153 (19%)

Query: 412 KLGKGGFGPVYKAK--FPGGQQIAVKRL---SSASG------------QGLEEFKN---- 450
           ++G+G +G V+KA+    GG+ +A+KR+   +   G            + LE F++    
Sbjct: 8   EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 67

Query: 451 ------EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLH 504
                  +  ++    +    +   +++ T+ D      +  E   +++  + RGL +LH
Sbjct: 68  RLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 127

Query: 505 QDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
                R++HRDLK  NIL+      K++DFGLA
Sbjct: 128 SH---RVVHRDLKPQNILVTSSGQIKLADFGLA 157

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 45.4 bits (107), Expect = 5e-05
 Identities = 42/184 (22%), Positives = 77/184 (41%), Gaps = 45/184 (24%)

Query: 395 IDFESILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSASG----------- 442
           I F+S    +D +     +GKG +G V+K      G + AVK L                
Sbjct: 8   IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNI 67

Query: 443 -QGLEE-----------FKNEIETSN---------SNATIGANVKAFVREMKTFSDPTLS 481
            + L +           +K +++  +         +  ++   VK F++  +   +P ++
Sbjct: 68  LKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIA 127

Query: 482 ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMM 541
            +LH  +          GL +LH +   + IHRD+K +NILL  E   K+ DFG++  + 
Sbjct: 128 YILHEALM---------GLQHLHVN---KTIHRDVKGNNILLTTEGGVKLVDFGVSAQLT 175

Query: 542 DQKL 545
             +L
Sbjct: 176 STRL 179

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 45.4 bits (107), Expect = 5e-05
 Identities = 41/166 (24%), Positives = 69/166 (41%), Gaps = 26/166 (15%)

Query: 395 IDFESILAATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEI-- 452
           ID  ++      F     +G G +G VYK +     Q+A  ++   +    EE K EI  
Sbjct: 6   IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINM 65

Query: 453 -ETSNSNATIGANVKAFVREMKTFSDPTLSALLHW-----------EMRFN--------- 491
            +  + +  I     AF+++     D  L  ++ +             + N         
Sbjct: 66  LKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAY 125

Query: 492 IIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           I   I RGL +LH     ++IHRD+K  N+LL +    K+ DFG++
Sbjct: 126 ICREILRGLAHLHAH---KVIHRDIKGQNVLLTENAEVKLVDFGVS 168

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 45.4 bits (107), Expect = 5e-05
 Identities = 53/179 (29%), Positives = 84/179 (46%), Gaps = 44/179 (24%)

Query: 400 ILAATDNFSEANKLGKGGFGPVYKAKF-PGGQQI----AVKRLSSA-SGQGLEEFKNE-- 451
           IL  T+ F +   LG G FG VYK  + P G+++    A+K L  A S +  +E  +E  
Sbjct: 3   ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 61

Query: 452 ----IETSNSNATIGANVKA----------------FVREMKTFSDPTLSA-LLHWEMRF 490
               ++  +    +G  + +                +VRE K   D   S  LL+W    
Sbjct: 62  VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHK---DNIGSQYLLNW---- 114

Query: 491 NIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA--LDMMDQKLHA 547
              + IA+G+ YL +    R++HRDL   N+L+    + KI+DFGLA  L   +++ HA
Sbjct: 115 --CVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHA 168

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 45.4 bits (107), Expect = 5e-05
 Identities = 44/160 (27%), Positives = 68/160 (42%), Gaps = 38/160 (23%)

Query: 413 LGKGGFGPVYKAKFPGG---QQIAVKRLSS-ASGQGLEEFKNEIET-------SNSNATI 461
           +G+G FG V KA+          A+KR+   AS     +F  E+E         N    +
Sbjct: 15  IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 74

Query: 462 GA-----------------NVKAFVREMKTF-SDPTLS------ALLHWEMRFNIIIGIA 497
           GA                 N+  F+R+ +   +DP  +      + L  +   +    +A
Sbjct: 75  GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 134

Query: 498 RGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           RG+ YL Q    + IHRDL   NIL+ +    KI+DFGL+
Sbjct: 135 RGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLS 171

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 45.0 bits (106), Expect = 5e-05
 Identities = 47/162 (29%), Positives = 68/162 (41%), Gaps = 40/162 (24%)

Query: 412 KLGKGGFGPVYKAKF----PG--GQQIAVKRLS-SASGQGLEEFKNE------IETSNSN 458
           +LG+  FG VYK       PG   Q +A+K L   A G   EEFK+E      ++  N  
Sbjct: 12  ELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIV 71

Query: 459 ATIGANVKAFVREM------------------------KTFSDPTLSALLHWEMRFNIII 494
             +G   K     M                         T  D T+ + L      +I+ 
Sbjct: 72  CLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVT 131

Query: 495 GIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGL 536
            IA G+ +L   S   ++H+DL T N+L+  ++N KISD GL
Sbjct: 132 QIAAGMEFL---SSHHVVHKDLATRNVLVFDKLNVKISDLGL 170

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 44.7 bits (106), Expect = 5e-05
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 5/55 (9%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSK 550
           +  G+ YL +      +HRDL   N+L+ +++  K+SDFGLA +    +   S K
Sbjct: 111 VCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAKE--ASQGQDSGK 160

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 45.2 bits (107), Expect = 6e-05
 Identities = 18/36 (50%), Positives = 24/36 (66%), Gaps = 3/36 (8%)

Query: 502 YLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           YLH      II+RDLK  N+LLD + + K++DFG A
Sbjct: 133 YLHS---KDIIYRDLKPENLLLDNKGHVKVTDFGFA 165

Length = 329

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 44.8 bits (106), Expect = 6e-05
 Identities = 19/39 (48%), Positives = 27/39 (69%), Gaps = 3/39 (7%)

Query: 499 GLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           G+  LHQ     IIHRD+K  N+L+DQ  + K++DFGL+
Sbjct: 109 GVEDLHQRG---IIHRDIKPENLLIDQTGHLKLTDFGLS 144

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 45.1 bits (106), Expect = 6e-05
 Identities = 45/152 (29%), Positives = 64/152 (42%), Gaps = 25/152 (16%)

Query: 405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVK--RLSSASGQGLEEFKNEIETSNSNATI 461
           D++ +  KLG+G +  VYK K    G+ +A+K  RL    G      +   E S      
Sbjct: 5   DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIR---EASLLKGLK 61

Query: 462 GANVKAFVREMKTFSDPTL----------------SALLHWEMRFNIIIGIARGLLYLHQ 505
            AN+      + T    TL                   LH E     +  + RGL Y+HQ
Sbjct: 62  HANIVLLHDIIHTKETLTLVFEYVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQ 121

Query: 506 DSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
                I+HRDLK  N+L+      K++DFGLA
Sbjct: 122 RY---ILHRDLKPQNLLISDTGELKLADFGLA 150

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 45.0 bits (106), Expect = 7e-05
 Identities = 46/170 (27%), Positives = 69/170 (40%), Gaps = 50/170 (29%)

Query: 412 KLGKGGFGPVYKAK----FPGGQQ--IAVKRLSSASGQGLEEFKNEIE--TSNSNATI-- 461
           +LG+G FG V+ A+     P   +  +AVK L  AS    ++F+ E E  T   +  I  
Sbjct: 12  ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVR 71

Query: 462 -------------------GANVKAFVR------------EMKTFSDPTLSALLHWEMRF 490
                                ++  F+R            E       TL  +L      
Sbjct: 72  FYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLA----- 126

Query: 491 NIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM 540
            I   IA G++YL   + L  +HRDL T N L+ Q +  KI DFG++ D+
Sbjct: 127 -IASQIASGMVYL---ASLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDI 172

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 44.8 bits (106), Expect = 8e-05
 Identities = 44/149 (29%), Positives = 68/149 (45%), Gaps = 21/149 (14%)

Query: 407 FSEANKLGKGGFGPVYKAK-FPGGQQIAVKRLSSASGQGLEEFKNEI-ETSNSNATIGAN 464
           F++  ++G G FG VY A+     + +A+K++S +  Q  E++++ I E          N
Sbjct: 17  FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPN 76

Query: 465 V---KA-FVRE----------MKTFSD--PTLSALLHWEMRFNIIIGIARGLLYLHQDSR 508
               K  ++RE          + + SD        L       I  G  +GL YLH   R
Sbjct: 77  TIEYKGCYLREHTAWLVMEYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHER 136

Query: 509 LRIIHRDLKTSNILLDQEMNPKISDFGLA 537
              IHRD+K  NILL +    K++DFG A
Sbjct: 137 ---IHRDIKAGNILLTEPGTVKLADFGSA 162

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 45.0 bits (107), Expect = 8e-05
 Identities = 19/41 (46%), Positives = 27/41 (65%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGL 536
           IA  +L +    +L  IHRD+K  N+LLD + + K+SDFGL
Sbjct: 107 IAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGL 147

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 44.6 bits (105), Expect = 8e-05
 Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 37/151 (24%)

Query: 412 KLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQGLEEFKNEIETSNS------------- 457
           +LG G FG VYKA+    G   A K + + S + LE++  EI+   S             
Sbjct: 12  ELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 71

Query: 458 ----NATI------GANVKAFVREM-KTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQD 506
               N  I      G  V A + E+ +  ++P +  +    +           L YLH++
Sbjct: 72  YYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLE---------ALNYLHEN 122

Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
              +IIHRDLK  NIL   + + K++DFG++
Sbjct: 123 ---KIIHRDLKAGNILFTLDGDIKLADFGVS 150

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 44.6 bits (105), Expect = 8e-05
 Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 3/46 (6%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMM 541
           I+ GL +LH+     II+RDLK  N++LD E + KI+DFG+  + M
Sbjct: 110 ISVGLFFLHRRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHM 152

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 44.4 bits (105), Expect = 9e-05
 Identities = 22/48 (45%), Positives = 30/48 (62%), Gaps = 3/48 (6%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQ 543
           I   L YLH      I++RDLK  NILLD+E + K++DFG A  + D+
Sbjct: 110 IVCALEYLHS---KEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR 154

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 44.4 bits (105), Expect = 9e-05
 Identities = 47/154 (30%), Positives = 67/154 (43%), Gaps = 31/154 (20%)

Query: 413 LGKGGFGPVYKAKF-PGGQQIAVKRLSS-------ASGQGLEEFKNEIETSNSNATIGAN 464
           LGKGGFG V   +    G+  A K+L              L E K  +E  NS   +   
Sbjct: 8   LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNE-KQILEKVNSRFVVSL- 65

Query: 465 VKAFVREMKTFSDPTLSALLHWEMRFNI----------------IIGIARGLLYLHQDSR 508
             A+  E K      L+ +   +++F+I                   I  GL  LH   R
Sbjct: 66  --AYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLH---R 120

Query: 509 LRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD 542
            RI++RDLK  NILLD   + +ISD GLA+++ +
Sbjct: 121 ERIVYRDLKPENILLDDYGHIRISDLGLAVEIPE 154

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 44.4 bits (105), Expect = 9e-05
 Identities = 38/164 (23%), Positives = 68/164 (41%), Gaps = 39/164 (23%)

Query: 405 DNFSEANKLGKGGFGPVYKAK-FPGGQQIAVKR-LSSASGQG-----LEEFK-------- 449
           D + +  K+G+G +G VYKA+    G+ +A+K+       +G     L E          
Sbjct: 1   DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSES 60

Query: 450 ---------NEIETSNSNATIGANVKAFVREMKTFSDPT-------LSALLHWEMRFNII 493
                      +E  N   ++    +    ++K F D         L A       + ++
Sbjct: 61  IYIVRLLDVEHVEEKNGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLL 120

Query: 494 IGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNP-KISDFGL 536
            G+A    + H   +  ++HRDLK  N+L+D++    KI+D GL
Sbjct: 121 KGVA----HCH---KHGVMHRDLKPQNLLVDKQKGLLKIADLGL 157

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 44.8 bits (106), Expect = 9e-05
 Identities = 40/155 (25%), Positives = 64/155 (41%), Gaps = 31/155 (20%)

Query: 411 NKLGKGGFGPVYKAK-FPGGQQIAVKRLSSASGQG------------------LEEFK-- 449
             LG+G +G V KA     G+ +A+K++                         L E K  
Sbjct: 15  AHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIM 74

Query: 450 NEIETSNSNATIGANV-KAFVREMKTFSDPTLSALLHWEMRFN------IIIGIARGLLY 502
           NEI+  N    +   V   F+  +       L  ++  ++R        I++ I  GL  
Sbjct: 75  NEIKHENIMGLVDVYVEGDFINLVMDIMASDLKKVVDRKIRLTESQVKCILLQILNGLNV 134

Query: 503 LHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           LH+      +HRDL  +NI ++ +   KI+DFGLA
Sbjct: 135 LHKWY---FMHRDLSPANIFINSKGICKIADFGLA 166

Length = 335

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 44.3 bits (105), Expect = 9e-05
 Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 2/51 (3%)

Query: 492 IIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD 542
           I I + RGL YL +  + +I+HRD+K SNIL++     K+ DFG++  ++D
Sbjct: 104 ISIAVLRGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 152

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 44.6 bits (105), Expect = 9e-05
 Identities = 44/154 (28%), Positives = 67/154 (43%), Gaps = 21/154 (13%)

Query: 401 LAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNA 459
             A  ++    KLG+G +  VYK      GQ +A+K +S  + +G+  F    E S    
Sbjct: 1   FGAATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVP-FTAIREASLLKG 59

Query: 460 TIGANVKAF-----VREMKTFSDPTLSALLHWEM--------RFNI---IIGIARGLLYL 503
              AN+         +E  TF    +   L   M         +N+   +  + RGL Y+
Sbjct: 60  LKHANIVLLHDIIHTKETLTFVFEYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYI 119

Query: 504 HQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           H      I+HRDLK  N+L+      K++DFGLA
Sbjct: 120 H---GQHILHRDLKPQNLLISYLGELKLADFGLA 150

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 43.8 bits (103), Expect = 1e-04
 Identities = 39/146 (26%), Positives = 66/146 (45%), Gaps = 31/146 (21%)

Query: 412 KLGKGGFGPVYKAKFPGGQQIAVKRLS-SASGQG-LEE--FKNEIETSNSNATIG----- 462
            +G+G FG V + ++ G Q++AVK +    + Q  LEE     ++   N    +G     
Sbjct: 13  IIGEGEFGAVLQGEYTG-QKVAVKNIKCDVTAQAFLEETAVMTKLHHKNLVRLLGVILHN 71

Query: 463 -----------ANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRI 511
                       N+  F+R         +  L     +F++   +A G+ YL      ++
Sbjct: 72  GLYIVMELMSKGNLVNFLRTRGRALVSVIQLL-----QFSL--DVAEGMEYLESK---KL 121

Query: 512 IHRDLKTSNILLDQEMNPKISDFGLA 537
           +HRDL   NIL+ ++   K+SDFGLA
Sbjct: 122 VHRDLAARNILVSEDGVAKVSDFGLA 147

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 44.0 bits (104), Expect = 1e-04
 Identities = 23/54 (42%), Positives = 36/54 (66%), Gaps = 3/54 (5%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASS 549
           I  GL +LH+     II+RDLK  N+LLD++ + KI+DFG+  + M+ +  AS+
Sbjct: 105 IICGLQFLHKKG---IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKAST 155

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 43.7 bits (103), Expect = 1e-04
 Identities = 22/39 (56%), Positives = 27/39 (69%), Gaps = 1/39 (2%)

Query: 500 LLYLHQDSRLRIIHRDLKTSNILLDQ-EMNPKISDFGLA 537
           LL LH      I+HRDLKT NILLD+ +M  KI DFG++
Sbjct: 111 LLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGIS 149

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 44.1 bits (104), Expect = 1e-04
 Identities = 39/144 (27%), Positives = 71/144 (49%), Gaps = 17/144 (11%)

Query: 407 FSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSASGQGLEEFKNEIET--SNSNATIGA 463
           ++   K+G+G  G VY A     GQ++A+K+++       E   NEI     N +  I  
Sbjct: 21  YTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVN 80

Query: 464 NVKAF-VRE-----MKTFSDPTLSALL-HWEMRFNIIIGIARGLL----YLHQDSRLRII 512
            + ++ V +     M+  +  +L+ ++    M    I  + R  L    +LH +   ++I
Sbjct: 81  YLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN---QVI 137

Query: 513 HRDLKTSNILLDQEMNPKISDFGL 536
           HRD+K+ NILL  + + K++DFG 
Sbjct: 138 HRDIKSDNILLGMDGSVKLTDFGF 161

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 43.8 bits (103), Expect = 1e-04
 Identities = 48/155 (30%), Positives = 68/155 (43%), Gaps = 43/155 (27%)

Query: 413 LGKGGFGPVYKA--KFPGGQQIAV------------KR---LSSASGQGLEEFKNEIE-- 453
           +G G FG V++   K PG +++AV            +R   LS AS  G     N I   
Sbjct: 13  IGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLE 72

Query: 454 ---TSNSNATI-------GANVKAFVREMK-TFSDPTLSALLHWEMRFNIIIGIARGLLY 502
              T    A I       GA +  ++R+    FS   L  +L          GIA G+ Y
Sbjct: 73  GVVTKFKPAMIITEYMENGA-LDKYLRDHDGEFSSYQLVGMLR---------GIAAGMKY 122

Query: 503 LHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           L   S +  +HRDL   NIL++  +  K+SDFGL+
Sbjct: 123 L---SDMNYVHRDLAARNILVNSNLECKVSDFGLS 154

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 43.9 bits (103), Expect = 1e-04
 Identities = 49/181 (27%), Positives = 77/181 (42%), Gaps = 31/181 (17%)

Query: 412 KLGKGGFGPVYKAKFPGGQQIAVKRLS--SASGQGLEEFKNEIETSNSNATIGANVKAFV 469
           KLG G FG V+   +    ++AVK L   + S Q   E  N ++T   +  +   + A V
Sbjct: 13  KLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLV--RLYAVV 70

Query: 470 REMKTF-----------------SDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRII 512
            + +                   SD     LL   + F+    IA G+ Y+    R   I
Sbjct: 71  TKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSA--QIAEGMAYIE---RKNYI 125

Query: 513 HRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSKPNEILK-----CINVGLLCVQE 567
           HRDL+ +N+L+ + +  KI+DFGLA  + D +  A       +K      IN G   ++ 
Sbjct: 126 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKS 185

Query: 568 D 568
           D
Sbjct: 186 D 186

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 44.0 bits (104), Expect = 1e-04
 Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 3/38 (7%)

Query: 500 LLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           L Y+H+     +IHRD+K +NIL+    N K+ DFG+A
Sbjct: 114 LKYIHKVG---VIHRDIKAANILVTNTGNVKLCDFGVA 148

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 43.8 bits (103), Expect = 1e-04
 Identities = 43/176 (24%), Positives = 75/176 (42%), Gaps = 48/176 (27%)

Query: 413 LGKGGFGPVYKAK------FPGGQQIAVKRLSSASGQG-----LEEFKNEIETSNSNAT- 460
           LG+G FG V KA         G   +AVK L   +        L EF    + ++ +   
Sbjct: 8   LGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIK 67

Query: 461 -IGA-----------------NVKAFVREMK--------TFSDPTLSALLHWEMR----- 489
             GA                 ++++F+RE +        +  +   S L + + R     
Sbjct: 68  LYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMG 127

Query: 490 --FNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQ 543
              +    I+RG+ YL   + ++++HRDL   N+L+ +    KISDFGL+ D+ ++
Sbjct: 128 DLISFAWQISRGMQYL---AEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEE 180

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 43.8 bits (103), Expect = 1e-04
 Identities = 44/154 (28%), Positives = 66/154 (42%), Gaps = 23/154 (14%)

Query: 407 FSEANKLGKGGFGPV------YKAKFPGGQQIAVKRLSSASGQGLEEFKNEI-ETSNSNA 459
           F     LGKGGFG V         K    +++  KR+    G+ +   +  I E  NS  
Sbjct: 2   FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRF 61

Query: 460 TIGANVKAFVREMKTFSDPTLSALLHWEMRFNII------IGIARGLLY-------LHQD 506
            +     A+  E K      L+ +   +++F+I           R + Y       L   
Sbjct: 62  VVSL---AYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDL 118

Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM 540
            R RI++RDLK  NILLD   + +ISD GLA+ +
Sbjct: 119 QRERIVYRDLKPENILLDDRGHIRISDLGLAVQI 152

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 44.0 bits (104), Expect = 2e-04
 Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 3/49 (6%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQK 544
           IA  L YLH    L II+RDLK  NILLD + +  ++DFGL  + ++  
Sbjct: 105 IASALGYLHS---LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHS 150

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 43.6 bits (103), Expect = 2e-04
 Identities = 37/162 (22%), Positives = 54/162 (33%), Gaps = 60/162 (37%)

Query: 412 KLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVKAFVRE 471
           KLG G FG V++  +     +AVK L   +                      + K F+ E
Sbjct: 13  KLGAGQFGEVWEGLWNNTTPVAVKTLKPGT---------------------MDPKDFLAE 51

Query: 472 ---MKTFSDPTLSAL---------------------------------LHWEMRFNIIIG 495
              MK    P L  L                                 L      ++   
Sbjct: 52  AQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQ 111

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           +A G+ YL   +    IHRDL   N+L+ +    K++DFGLA
Sbjct: 112 VASGMAYLEAQN---YIHRDLAARNVLVGENNICKVADFGLA 150

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 43.8 bits (103), Expect = 2e-04
 Identities = 20/42 (47%), Positives = 29/42 (69%), Gaps = 3/42 (7%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           I RGL Y H   R +++HRDLK  N+L+++    K++DFGLA
Sbjct: 113 ILRGLAYCH---RRKVLHRDLKPQNLLINERGELKLADFGLA 151

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 43.9 bits (104), Expect = 2e-04
 Identities = 20/39 (51%), Positives = 25/39 (64%), Gaps = 3/39 (7%)

Query: 499 GLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           G+ +LH      IIHRDLK SNI++  +   KI DFGLA
Sbjct: 130 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA 165

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 43.6 bits (102), Expect = 2e-04
 Identities = 43/170 (25%), Positives = 80/170 (47%), Gaps = 20/170 (11%)

Query: 397 FESILAATD---NFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSASGQGLEEFKNEI 452
             SI++  D    ++   K+G+G  G VY A     GQ++A+K+++       E   NEI
Sbjct: 8   LRSIVSVGDPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEI 67

Query: 453 ET--SNSNATIGANVKAFVRE------MKTFSDPTLSALLHWE-MRFNIIIGIARGLL-- 501
                N N  I   + +++        M+  +  +L+ ++    M    I  + R  L  
Sbjct: 68  LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQA 127

Query: 502 --YLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASS 549
             +LH +   ++IHRD+K+ NILL  + + K++DFG    +  ++   S+
Sbjct: 128 LDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST 174

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 43.7 bits (103), Expect = 2e-04
 Identities = 18/37 (48%), Positives = 27/37 (72%), Gaps = 3/37 (8%)

Query: 500 LLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGL 536
           L++LH+     +I+RDLK  NILLD E + K++DFG+
Sbjct: 109 LMFLHRHG---VIYRDLKLDNILLDAEGHCKLADFGM 142

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 43.8 bits (103), Expect = 2e-04
 Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 3/47 (6%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD 542
           +ARG+ YL  +SR R IHRDL   N+L+ ++   KI+DFGLA  + D
Sbjct: 143 VARGMEYL--ESR-RCIHRDLAARNVLVTEDNVMKIADFGLARGVHD 186

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 43.2 bits (102), Expect = 2e-04
 Identities = 16/40 (40%), Positives = 29/40 (72%), Gaps = 3/40 (7%)

Query: 498 RGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           +G+ + H++   R++HRDLK  N+L+++    K++DFGLA
Sbjct: 111 KGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLA 147

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 43.5 bits (102), Expect = 2e-04
 Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 3/46 (6%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMM 541
           IA GL +LH      II+RDLK  N++LD E + KI+DFG+  + M
Sbjct: 110 IAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENM 152

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 43.5 bits (102), Expect = 2e-04
 Identities = 40/158 (25%), Positives = 66/158 (41%), Gaps = 39/158 (24%)

Query: 407 FSEANKLGKGGFGPVYKAK-FPGGQQIAVKRLSSASGQGLEEFK---------------N 450
           FS+  ++G G FG VY A+     + +A+K++S +  Q  E+++               N
Sbjct: 17  FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76

Query: 451 EIETSNS-----------NATIGANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARG 499
            I+                  +G+         K   +  ++A+ H         G  +G
Sbjct: 77  TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTH---------GALQG 127

Query: 500 LLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           L YLH  +   +IHRD+K  NILL +    K+ DFG A
Sbjct: 128 LAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSA 162

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 43.5 bits (102), Expect = 2e-04
 Identities = 20/54 (37%), Positives = 30/54 (55%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASS 549
           IA  +L +H   +L  +HRD+K  N+LLD   + +++DFG  L M       SS
Sbjct: 108 IAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQSS 161

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 43.2 bits (102), Expect = 2e-04
 Identities = 40/178 (22%), Positives = 66/178 (37%), Gaps = 43/178 (24%)

Query: 404 TDNFSEANKLGKGGFGPVYKAK-FPGGQQIAVKRL-------SSASGQGLEEFK------ 449
             NF    K+GKG F  VYKA     G+ +A+K++       + A    L+E        
Sbjct: 1   LGNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLD 60

Query: 450 --------------NEIETSNSNATIG---ANVKAFVREMKTFSDPTLSALLHWEMRFNI 492
                         NE+      A  G     +K F ++ +   + T+     W      
Sbjct: 61  HPNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTI-----W----KY 111

Query: 493 IIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSK 550
            + +   L ++H     RI+HRD+K +N+ +      K+ D GL      +   A S 
Sbjct: 112 FVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSL 166

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 43.1 bits (101), Expect = 2e-04
 Identities = 41/150 (27%), Positives = 73/150 (48%), Gaps = 22/150 (14%)

Query: 405 DNFSEANKLGKGGFGPVYKAK-FPGGQQIAVKRLSSASGQGLEEFKNEI----ETSNSNA 459
           ++F    ++G G +G VYKA+    G+  A+K +    G+     + EI    +  +SN 
Sbjct: 9   EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSN- 67

Query: 460 TIGANVKAFVRE------MKTFSDPTLSALLH--WEMRFNIIIGIAR----GLLYLHQDS 507
            I A   +++R       M+     +L  + H    +  + I  ++R    GL YLH   
Sbjct: 68  -IVAYFGSYLRRDKLWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKG 126

Query: 508 RLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           +   +HRD+K +NILL    + K++DFG++
Sbjct: 127 K---MHRDIKGANILLTDNGHVKLADFGVS 153

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 43.1 bits (101), Expect = 2e-04
 Identities = 43/152 (28%), Positives = 65/152 (42%), Gaps = 21/152 (13%)

Query: 412 KLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETSNS---------NATIG 462
           KLG G FG V+   + G  ++AVK L   +    E F  E +              A + 
Sbjct: 13  KLGNGQFGEVWMGTWNGNTKVAVKTLKPGT-MSPESFLEEAQIMKKLRHDKLVQLYAVVS 71

Query: 463 ANVKAFVREMKTFSDPTLSALLHWEMRF-------NIIIGIARGLLYLHQDSRLRIIHRD 515
                 V E  +     L  L   E R        ++   +A G+ Y+    R+  IHRD
Sbjct: 72  EEPIYIVTEYMS-KGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE---RMNYIHRD 127

Query: 516 LKTSNILLDQEMNPKISDFGLALDMMDQKLHA 547
           L+++NIL+   +  KI+DFGLA  + D +  A
Sbjct: 128 LRSANILVGDGLVCKIADFGLARLIEDNEYTA 159

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 43.2 bits (102), Expect = 3e-04
 Identities = 44/160 (27%), Positives = 71/160 (44%), Gaps = 30/160 (18%)

Query: 405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQ------GLEEFK-------- 449
           D F    ++G+G +G VYKA+    G+ +A+K++   + +       + E K        
Sbjct: 7   DKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHR 66

Query: 450 -----NEIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEM-RFN------IIIGIA 497
                 EI T   +A      K     +  + D  L  LL   +  F+       +  + 
Sbjct: 67  NIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLL 126

Query: 498 RGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            GL Y H+ + L   HRD+K SNILL+ +   K++DFGLA
Sbjct: 127 EGLNYCHKKNFL---HRDIKCSNILLNNKGQIKLADFGLA 163

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 43.2 bits (102), Expect = 3e-04
 Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 3/42 (7%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           I  GL Y+H  +   ++HRDLK  N+L++ +   KI DFGLA
Sbjct: 114 ILCGLKYIHSAN---VLHRDLKPGNLLVNADCELKICDFGLA 152

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 43.1 bits (102), Expect = 3e-04
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 3/46 (6%)

Query: 492 IIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            I  + + + Y H      IIHRD+K  NIL+ +    K+ DFG A
Sbjct: 105 YIWQLLQAIAYCH---SHNIIHRDIKPENILVSESGVLKLCDFGFA 147

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 42.9 bits (101), Expect = 3e-04
 Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 3/41 (7%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGL 536
           I   L YLH      +++RDLK  N++LD++ + KI+DFGL
Sbjct: 104 IVSALGYLH---SCDVVYRDLKLENLMLDKDGHIKITDFGL 141

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 42.7 bits (100), Expect = 3e-04
 Identities = 19/40 (47%), Positives = 29/40 (72%), Gaps = 3/40 (7%)

Query: 498 RGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           RGL Y H   + +I+HRDLK  N+L++++   K++DFGLA
Sbjct: 114 RGLSYCH---KRKILHRDLKPQNLLINEKGELKLADFGLA 150

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 43.1 bits (101), Expect = 3e-04
 Identities = 19/40 (47%), Positives = 28/40 (70%), Gaps = 3/40 (7%)

Query: 498 RGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           RGL Y H   R +++HRDLK  N+L+++    K++DFGLA
Sbjct: 115 RGLNYCH---RRKVLHRDLKPQNLLINERGELKLADFGLA 151

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 42.8 bits (101), Expect = 3e-04
 Identities = 42/147 (28%), Positives = 66/147 (44%), Gaps = 24/147 (16%)

Query: 405 DNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSASGQGLEEFKNE------------ 451
           DNF    K+G+G  G V  A     G+Q+AVK++     Q  E   NE            
Sbjct: 22  DNF---VKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNI 78

Query: 452 IETSNSNATIGAN---VKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSR 508
           +E  +S   +G     V  F+ E    +D      ++ E    + + + + L +LH    
Sbjct: 79  VEMYSSY-LVGDELWVVMEFL-EGGALTDIVTHTRMNEEQIATVCLAVLKALSFLHAQ-- 134

Query: 509 LRIIHRDLKTSNILLDQEMNPKISDFG 535
             +IHRD+K+ +ILL  +   K+SDFG
Sbjct: 135 -GVIHRDIKSDSILLTSDGRVKLSDFG 160

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 42.7 bits (100), Expect = 3e-04
 Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 3/51 (5%)

Query: 487 EMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           +M    +  IA G+ YL   S    IHRDL   N +L++ MN  ++DFGL+
Sbjct: 112 QMLVKFMTDIASGMEYL---SSKSFIHRDLAARNCMLNENMNVCVADFGLS 159

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 42.6 bits (100), Expect = 4e-04
 Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 3/42 (7%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           + +GL Y+H      IIHRDLK  N+ ++++   KI DFGLA
Sbjct: 127 MLKGLKYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLA 165

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 42.6 bits (100), Expect = 4e-04
 Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 11/70 (15%)

Query: 468 FVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEM 527
            VR+ +   DP    LL+W       + IA+G+ YL +    R++HR+L   NILL  + 
Sbjct: 98  HVRQHRDSLDPQR--LLNW------CVQIAKGMYYLEEH---RMVHRNLAARNILLKSDS 146

Query: 528 NPKISDFGLA 537
             +I+DFG+A
Sbjct: 147 IVQIADFGVA 156

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 42.2 bits (99), Expect = 4e-04
 Identities = 48/168 (28%), Positives = 72/168 (42%), Gaps = 49/168 (29%)

Query: 413 LGKGGFGPVYKAKF-------PGGQQIAVKRL-SSASGQGLEEFKNE------------- 451
           LG G FG VY+           G  ++AVK L   A+ Q  +EF  E             
Sbjct: 3   LGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIV 62

Query: 452 ----IETSNSNATI------GANVKAFVRE--MKTFSDP--TLSALLHWEMRFNIIIGIA 497
               +   N    I      G ++ +++R+  ++ F  P  TL  LL      +I + +A
Sbjct: 63  KLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELL------DICLDVA 116

Query: 498 RGLLYLHQDSRLRIIHRDLKTSNILLDQEMNP-----KISDFGLALDM 540
           +G +YL Q   +  IHRDL   N L+ ++        KI DFGLA D+
Sbjct: 117 KGCVYLEQ---MHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDI 161

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 42.3 bits (99), Expect = 4e-04
 Identities = 43/158 (27%), Positives = 68/158 (43%), Gaps = 39/158 (24%)

Query: 407 FSEANKLGKGGFGPVYKAKFPGGQQI-AVKRLSSASGQGLEE---------FKNEIETSN 456
           F   +++G G FG VY A      ++ AVK++S +  Q  E+         F  +++  N
Sbjct: 23  FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPN 82

Query: 457 SNATIGANVKA----FVREM-------------KTFSDPTLSALLHWEMRFNIIIGIARG 499
           +    G  +K      V E              K   +  ++A+ H         G  +G
Sbjct: 83  TIEYKGCYLKEHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITH---------GALQG 133

Query: 500 LLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           L YLH  +   +IHRD+K  NILL +    K++DFG A
Sbjct: 134 LAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSA 168

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 42.7 bits (100), Expect = 4e-04
 Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 3/52 (5%)

Query: 492 IIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQ 543
           +I  + RGL Y+H      IIHRDLK SN+ ++++   +I DFGLA    D+
Sbjct: 123 LIYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQADDE 171

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 42.0 bits (98), Expect = 4e-04
 Identities = 41/151 (27%), Positives = 62/151 (41%), Gaps = 19/151 (12%)

Query: 412 KLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETSNS---------NATIG 462
           KLG+G FG V+   + G  ++A+K L   +    E F  E +              A + 
Sbjct: 13  KLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS 71

Query: 463 ANVKAFVREMKT------FSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDL 516
                 V E         F        L      ++   IA G+ Y+    R+  IHRDL
Sbjct: 72  EEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIE---RMNYIHRDL 128

Query: 517 KTSNILLDQEMNPKISDFGLALDMMDQKLHA 547
           + +NIL+   +  KI+DFGLA  + D +  A
Sbjct: 129 RAANILVGDNLVCKIADFGLARLIEDNEYTA 159

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 42.3 bits (99), Expect = 4e-04
 Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 17/139 (12%)

Query: 412 KLGKGGFGPVYKA-KFPGGQQIAVKRLSSASGQGLEEFKNEIETSN-----------SNA 459
           K+G+G  G V  A +   G+Q+AVK++     Q  E   NE+               ++ 
Sbjct: 29  KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSY 88

Query: 460 TIGANVKAFVR--EMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLK 517
            +G  +   +   E    +D      ++ E    + + + R L YLH      +IHRD+K
Sbjct: 89  LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQG---VIHRDIK 145

Query: 518 TSNILLDQEMNPKISDFGL 536
           + +ILL  +   K+SDFG 
Sbjct: 146 SDSILLTSDGRIKLSDFGF 164

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 42.3 bits (99), Expect = 5e-04
 Identities = 21/56 (37%), Positives = 36/56 (64%), Gaps = 2/56 (3%)

Query: 487 EMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD 542
           E+   + I + RGL YL +  + +I+HRD+K SNIL++     K+ DFG++  ++D
Sbjct: 103 EILGKVSIAVLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 156

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 42.0 bits (99), Expect = 5e-04
 Identities = 36/161 (22%), Positives = 71/161 (44%), Gaps = 44/161 (27%)

Query: 406 NFSEANKLGKGGFGPVYKAK-FPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGAN 464
            + +  K+G+G +G V+KAK     + +A+KR+       L++  +E   S++   I   
Sbjct: 1   KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVR------LDD-DDEGVPSSALREI--- 50

Query: 465 VKAFVREMKTFSDPTLSALLHWEMRFNII----------------------------IGI 496
               ++E+K  +   L  +LH + +  ++                              +
Sbjct: 51  --CLLKELKHKNIVRLYDVLHSDKKLTLVFEYCDQDLKKYFDSCNGDIDPEIVKSFMFQL 108

Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            +GL + H      ++HRDLK  N+L+++    K++DFGLA
Sbjct: 109 LKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLA 146

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 42.2 bits (99), Expect = 5e-04
 Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 3/43 (6%)

Query: 495 GIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           GIA G+ YL   S +  +HRDL   NIL++  +  K+SDFGL+
Sbjct: 114 GIAAGMKYL---SEMNYVHRDLAARNILVNSNLVCKVSDFGLS 153

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 42.2 bits (99), Expect = 5e-04
 Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 26/161 (16%)

Query: 413 LGKGGFGPVYKAKFP-----GGQQIAVKRLSSASGQG-LEEFKNEIETSNS--------- 457
           LG+G FG V   ++       G+Q+AVK L   SG   + + K EIE   +         
Sbjct: 12  LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 71

Query: 458 ----NATIGANVKAFVREMKTFSD----PTLSALLHWEMRFNIIIGIARGLLYLHQDSRL 509
                   G  +K  +  + + S     P     ++ + +    + I +G+ YL   SR 
Sbjct: 72  KGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYL--GSR- 128

Query: 510 RIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSK 550
           + +HRDL   N+L++ E   KI DFGL   +   K + + K
Sbjct: 129 QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVK 169

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 42.0 bits (98), Expect = 5e-04
 Identities = 41/157 (26%), Positives = 75/157 (47%), Gaps = 20/157 (12%)

Query: 397 FESILAATD---NFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSASGQGLEEFKNEI 452
             SI++  D    ++   K+G+G  G VY A     GQ++A+++++       E   NEI
Sbjct: 9   LRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 68

Query: 453 ET--SNSNATIGANVKAFVRE------MKTFSDPTLSALLHWE-MRFNIIIGIAR----G 499
                N N  I   + +++        M+  +  +L+ ++    M    I  + R     
Sbjct: 69  LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQA 128

Query: 500 LLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGL 536
           L +LH +   ++IHRD+K+ NILL  + + K++DFG 
Sbjct: 129 LEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGF 162

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score = 42.2 bits (99), Expect = 5e-04
 Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 9/63 (14%)

Query: 478 PTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            + S+LLH      + + IA G+ YL   S L  +HRDL T N L+ + +  KI+DFG++
Sbjct: 135 ISYSSLLH------VALQIASGMKYL---SSLNFVHRDLATRNCLVGENLTIKIADFGMS 185

Query: 538 LDM 540
            ++
Sbjct: 186 RNL 188

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 42.1 bits (99), Expect = 6e-04
 Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 3/40 (7%)

Query: 498 RGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           R L Y+H  +   + HRDLK  NIL + +   KI DFGLA
Sbjct: 114 RALKYIHTAN---VFHRDLKPKNILANADCKLKICDFGLA 150

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 41.6 bits (97), Expect = 6e-04
 Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 22/149 (14%)

Query: 406 NFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSASGQGLEEFKNEI----ETSNSNAT 460
           ++    ++G G +G VYKA     G+  AVK +    G      + EI    E  + N  
Sbjct: 10  DYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCN-- 67

Query: 461 IGANVKAFV-RE-----MKTFSDPTLSALLH-----WEMRFNIII-GIARGLLYLHQDSR 508
           I A   +++ RE     M+     +L  + H      E++   +     +GL YLH   +
Sbjct: 68  IVAYFGSYLSREKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGK 127

Query: 509 LRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           +   HRD+K +NILL    + K++DFG+A
Sbjct: 128 M---HRDIKGANILLTDNGDVKLADFGVA 153

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 42.1 bits (99), Expect = 6e-04
 Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 2/54 (3%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASS 549
           +A  +L +    +L  IHRD+K  NIL+D+  + K+SDFGL+      K H S+
Sbjct: 107 MAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGF--HKQHDSA 158

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 41.8 bits (98), Expect = 7e-04
 Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 3/43 (6%)

Query: 495 GIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           GIA G+ YL   S +  +HRDL   NIL++  +  K+SDFGL+
Sbjct: 114 GIASGMKYL---SDMGYVHRDLAARNILVNSNLVCKVSDFGLS 153

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|178763 PLN03224, PLN03224, probable serine/threonine protein kinase; Provisional

 Score = 42.0 bits (98), Expect = 7e-04
 Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 7/54 (12%)

Query: 491 NIIIGIAR----GLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM 540
           N+I G+ R    GL  LH   R+ I+HRD+K  N+L+  +   KI DFG A+DM
Sbjct: 309 NVIKGVMRQVLTGLRKLH---RIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDM 359

Length = 507

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 41.7 bits (98), Expect = 8e-04
 Identities = 16/54 (29%), Positives = 31/54 (57%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASS 549
           +A  +L +    +L  +HRD+K  N+LLD+  + +++DFG  L ++      S+
Sbjct: 108 LAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQSN 161

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 41.5 bits (97), Expect = 8e-04
 Identities = 45/179 (25%), Positives = 73/179 (40%), Gaps = 28/179 (15%)

Query: 412 KLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETSNS---------NATIG 462
           KLG G FG V+ A +    ++AVK +   S   +E F  E     +         +A + 
Sbjct: 13  KLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT 71

Query: 463 ANVKAFVREMKTFSDPTLSALLHWE--------MRFNIIIGIARGLLYLHQDSRLRIIHR 514
                 + E    +  +L   L  +           +    IA G+ ++ Q +    IHR
Sbjct: 72  KEPIYIITEF--MAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHR 126

Query: 515 DLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSKPNEILK-----CINVGLLCVQED 568
           DL+ +NIL+   +  KI+DFGLA  + D +  A       +K      IN G   ++ D
Sbjct: 127 DLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSD 185

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 41.8 bits (98), Expect = 8e-04
 Identities = 23/45 (51%), Positives = 29/45 (64%), Gaps = 3/45 (6%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM 540
           +ARG+ +L   SR + IHRDL   NILL +    KI DFGLA D+
Sbjct: 182 VARGMEFL--ASR-KCIHRDLAARNILLSENNVVKICDFGLARDI 223

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 41.3 bits (97), Expect = 9e-04
 Identities = 21/41 (51%), Positives = 28/41 (68%), Gaps = 3/41 (7%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGL 536
           I+  L +LHQ     II+RDLK  NILLD + + K++DFGL
Sbjct: 109 ISLALEHLHQ---QGIIYRDLKPENILLDAQGHVKLTDFGL 146

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 41.4 bits (97), Expect = 0.001
 Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 3/41 (7%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGL 536
           I   L++LH      II+RDLK  N+LLD E + K++DFG+
Sbjct: 105 ITSALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGM 142

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 41.1 bits (96), Expect = 0.001
 Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 3/46 (6%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMM 541
           I  GL +LH      I++RDLK  NILLD + + KI+DFG+  + M
Sbjct: 105 IICGLQFLHSKG---IVYRDLKLDNILLDTDGHIKIADFGMCKENM 147

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 40.9 bits (96), Expect = 0.001
 Identities = 40/158 (25%), Positives = 66/158 (41%), Gaps = 33/158 (20%)

Query: 413 LGKGGFGPVYKAKFPGGQQIAVKRL---SSASGQGLEEFKNEIETSNSNAT--IGANVK- 466
           LG G FG V+  K+ G   +A+K +   + +    +EE K  ++ S+ N     G   K 
Sbjct: 12  LGSGQFGVVHLGKWRGKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQ 71

Query: 467 ----------------AFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLR 510
                            ++RE K          L  E   ++   +   + YL  +    
Sbjct: 72  RPIFIVTEYMANGCLLNYLRERK--------GKLGTEWLLDMCSDVCEAMEYLESNG--- 120

Query: 511 IIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHAS 548
            IHRDL   N L+ ++   K+SDFGLA  ++D +  +S
Sbjct: 121 FIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSS 158

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 41.0 bits (96), Expect = 0.001
 Identities = 35/156 (22%), Positives = 58/156 (37%), Gaps = 60/156 (38%)

Query: 492 IIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD--------- 542
           I + + +GL YL     L+I+HRD+K SN+L++     K+ DFG++  +++         
Sbjct: 100 IAVAVVKGLTYLWS---LKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYVGT 156

Query: 543 ----------------------------------------QKLHASSKPNEILKCINVGL 562
                                                   QK   S  P ++L+CI    
Sbjct: 157 NAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCI---- 212

Query: 563 LCVQEDPNDRPT--MSDVVIMLGSEAMNLATPKRPA 596
             V EDP   P    S+  +   ++ M     +RPA
Sbjct: 213 --VDEDPPVLPVGQFSEKFVHFITQCMRKQPKERPA 246

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 40.7 bits (95), Expect = 0.001
 Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 3/56 (5%)

Query: 494 IGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASS 549
           + IA  L YLH+     I+HRDLKT N+ L +    K+ D G+A  + +Q   AS+
Sbjct: 109 VQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMAST 161

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 41.2 bits (96), Expect = 0.001
 Identities = 19/51 (37%), Positives = 34/51 (66%), Gaps = 2/51 (3%)

Query: 492 IIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD 542
           + I + +GL YL +  + +I+HRD+K SNIL++     K+ DFG++  ++D
Sbjct: 108 VSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 156

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 40.8 bits (95), Expect = 0.001
 Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 9/71 (12%)

Query: 467 AFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQE 526
           AF +E  T S  T   LL +         +A G+ YL   S  + IHRDL   N+L+ + 
Sbjct: 105 AFAKEHGTASTLTSQQLLQFA------SDVATGMQYL---SEKQFIHRDLAARNVLVGEN 155

Query: 527 MNPKISDFGLA 537
           +  KI+DFGL+
Sbjct: 156 LASKIADFGLS 166

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 40.8 bits (95), Expect = 0.001
 Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 3/40 (7%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFG 535
           I  G+ YLH +    I+HRD+K +NIL D   N K+ DFG
Sbjct: 115 ILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGDFG 151

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 40.8 bits (96), Expect = 0.001
 Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 14/71 (19%)

Query: 478 PTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            + S LL+      +   IA G+ YL     L  +HRDL T N L+ +    KI+DFG  
Sbjct: 127 LSFSTLLY------MATQIASGMRYL---ESLNFVHRDLATRNCLVGKNYTIKIADFG-- 175

Query: 538 LDMMDQKLHAS 548
              M + L++S
Sbjct: 176 ---MSRNLYSS 183

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 41.0 bits (96), Expect = 0.001
 Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 3/40 (7%)

Query: 498 RGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            GL Y+H      IIHRDLK  N+ ++++   KI DFGLA
Sbjct: 128 CGLKYIHSAG---IIHRDLKPGNLAVNEDCELKILDFGLA 164

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 40.5 bits (95), Expect = 0.001
 Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 3/46 (6%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMM 541
           +A+G+ +L   +    IHRDL   N+LL      KI DFGLA D+M
Sbjct: 150 VAKGMAFLASKN---CIHRDLAARNVLLTHGKIVKICDFGLARDIM 192

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 40.4 bits (94), Expect = 0.002
 Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 3/40 (7%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFG 535
           I +G+ YLH +    I+HRD+K +NIL D   N K+ DFG
Sbjct: 115 ILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFG 151

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

 Score = 40.8 bits (95), Expect = 0.002
 Identities = 23/45 (51%), Positives = 29/45 (64%), Gaps = 3/45 (6%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM 540
           +ARG+ +L   SR + IHRDL   NILL +    KI DFGLA D+
Sbjct: 183 VARGMEFLA--SR-KCIHRDLAARNILLSENNVVKICDFGLARDI 224

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 40.2 bits (94), Expect = 0.002
 Identities = 42/166 (25%), Positives = 67/166 (40%), Gaps = 37/166 (22%)

Query: 411 NKLGKGGFGPVYKAKFPG-GQQIAVKRLSSASGQGLEEF------KNEIETSNSNATIG- 462
           +KLG G +G VY+  +      +AVK L   +   +EEF        EI+  N    +G 
Sbjct: 12  HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGV 70

Query: 463 ----------------ANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQD 506
                            N+  ++RE        +  LL+   +      I+  + YL + 
Sbjct: 71  CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV-VLLYMATQ------ISSAMEYLEKK 123

Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKL--HASSK 550
           +    IHRDL   N L+ +    K++DFGL+  M       HA +K
Sbjct: 124 N---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAK 166

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 40.7 bits (95), Expect = 0.002
 Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 3/49 (6%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQK 544
           +A  + YLH    L II+RDLK  NILLD + +  ++DFGL  + ++ +
Sbjct: 105 VASAIGYLHS---LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE 150

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 40.5 bits (94), Expect = 0.002
 Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 17/165 (10%)

Query: 399 SILAATDNFSEANKLGKGGFGPVYKAK-FPGGQQIAVKRLSSASGQGLEEFKNEI----E 453
           SI      ++   K+G+G  G V+ A     GQ++A+K+++       E   NEI    E
Sbjct: 13  SIGDPKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKE 72

Query: 454 TSNSNAT-------IGANVKAFVREMK--TFSDPTLSALLHWEMRFNIIIGIARGLLYLH 504
             N N         +G  +   +  +   + +D      +       +     + L +LH
Sbjct: 73  LKNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDVVTETCMDEAQIAAVCRECLQALEFLH 132

Query: 505 QDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASS 549
            +   ++IHRD+K+ N+LL  + + K++DFG    +  ++   S+
Sbjct: 133 AN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRST 174

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 40.2 bits (94), Expect = 0.002
 Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 3/63 (4%)

Query: 487 EMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLH 546
           +M  ++   +  G+ YL ++S    IHRDL   N L+      K+SDFG+   ++D +  
Sbjct: 100 DMLLSMCQDVCEGMEYLERNS---FIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYT 156

Query: 547 ASS 549
           +SS
Sbjct: 157 SSS 159

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 40.3 bits (94), Expect = 0.002
 Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 3/45 (6%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM 540
           IA G+ YL   + L  +HRDL T N L+      KI+DFG++ ++
Sbjct: 138 IASGMKYL---ASLNFVHRDLATRNCLVGNHYTIKIADFGMSRNL 179

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 40.1 bits (94), Expect = 0.002
 Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 3/42 (7%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           I RG+ + H  +   IIHRD+K  NIL+ Q    K+ DFG A
Sbjct: 109 ILRGIEFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFA 147

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 40.4 bits (94), Expect = 0.002
 Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 3/45 (6%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM 540
           +ARG+ YL   +  + IHRDL   N+L+ ++   KI+DFGLA D+
Sbjct: 149 VARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 190

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 40.4 bits (94), Expect = 0.002
 Identities = 21/41 (51%), Positives = 27/41 (65%), Gaps = 3/41 (7%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGL 536
           IA  L YLH    L I++RDLK  NILLD + +  ++DFGL
Sbjct: 105 IASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGL 142

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 40.0 bits (93), Expect = 0.003
 Identities = 20/41 (48%), Positives = 27/41 (65%), Gaps = 3/41 (7%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGL 536
           IA  L YLH    + I++RDLK  NILLD + +  ++DFGL
Sbjct: 105 IASALGYLHS---INIVYRDLKPENILLDSQGHVVLTDFGL 142

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 40.0 bits (93), Expect = 0.003
 Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 3/45 (6%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM 540
           +ARG+ YL   +  + IHRDL   N+L+ ++   KI+DFGLA D+
Sbjct: 143 VARGMEYL---ASQKCIHRDLAARNVLVTEDNVMKIADFGLARDV 184

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 39.6 bits (92), Expect = 0.003
 Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 3/45 (6%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM 540
           +ARG+ YL   +  + IHRDL   N+L+ +    KI+DFGLA D+
Sbjct: 146 VARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDV 187

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 39.5 bits (92), Expect = 0.003
 Identities = 46/174 (26%), Positives = 65/174 (37%), Gaps = 68/174 (39%)

Query: 412 KLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETS--NSNATIGANVKA-- 467
           +LGKG FG VY           VK   + + + L+  K EI     N N T+ AN +A  
Sbjct: 7   RLGKGSFGTVY----------LVKDKKAVAEERLKVLK-EIPVGELNPNETVQANQEAQL 55

Query: 468 ------------------------------------FVREMK----TFSDPTLSALLHWE 487
                                                + E+K    T S+  +     W 
Sbjct: 56  LSKLDHPAIVKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQV---CEW- 111

Query: 488 MRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMM 541
                 I +  G+ Y+HQ    RI+HRDLK  NI L   +  KI DFG++  +M
Sbjct: 112 -----FIQLLLGVHYMHQR---RILHRDLKAKNIFLKNNL-LKIGDFGVSRLLM 156

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 39.5 bits (92), Expect = 0.003
 Identities = 35/164 (21%), Positives = 65/164 (39%), Gaps = 27/164 (16%)

Query: 405 DNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIE----------- 453
              +   ++G G FG V+   +   +++A+K +   +    E+F  E +           
Sbjct: 4   SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLV 62

Query: 454 ------TSNSNATIGANVKAFVREMKTFSD--PTLSALLHWEMRFNIIIGIARGLLYLHQ 505
                 T  S   +   V  F+ E    SD           E    + + +  G+ YL  
Sbjct: 63  QLYGVCTERSPICL---VFEFM-EHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLES 118

Query: 506 DSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASS 549
            +   +IHRDL   N L+ +    K+SDFG+   ++D +  +S+
Sbjct: 119 SN---VIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSST 159

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 39.5 bits (92), Expect = 0.003
 Identities = 43/175 (24%), Positives = 80/175 (45%), Gaps = 31/175 (17%)

Query: 407 FSEANKLGKGGFGPVYKAKFPGGQQIAVKRLS------SASGQGLEEFKNEIETSNS--N 458
           +++   LGKG +G VY      GQ IAVK++        A+ +  E+ + E++   S  +
Sbjct: 2   WTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKH 61

Query: 459 ATIGANVKAFVRE------MKTFSDPTLSALLHWEMRFNIII---------GIARGLLYL 503
             I   +   + +      M+     ++S++L+   RF  +           I  G+ YL
Sbjct: 62  VNIVQYLGTCLDDNTISIFMEFVPGGSISSILN---RFGPLPEPVFCKYTKQILDGVAYL 118

Query: 504 HQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSKPNEILKCI 558
           H +    ++HRD+K +N++L      K+ DFG A  +    LH +   + +LK +
Sbjct: 119 HNNC---VVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTH--SNMLKSM 168

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 39.2 bits (91), Expect = 0.004
 Identities = 39/177 (22%), Positives = 76/177 (42%), Gaps = 46/177 (25%)

Query: 403 ATDNFSEANKLGKGGFGPVYKAKFPG------GQQIAVKRLS-SASGQGLEEFKNEIET- 454
           A +  + + +LG+G FG VY+    G        ++A+K ++ +AS +   EF NE    
Sbjct: 4   AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 63

Query: 455 ---------------SNSNATI-------GANVKAFVREMK-------TFSDPTLSALLH 485
                          S    T+         ++K+++R ++         + P+L  ++ 
Sbjct: 64  KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQ 123

Query: 486 WEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD 542
                     IA G+ YL+ +   + +HRDL   N ++ ++   KI DFG+  D+ +
Sbjct: 124 MAGE------IADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 171

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 39.5 bits (92), Expect = 0.004
 Identities = 18/38 (47%), Positives = 27/38 (71%), Gaps = 3/38 (7%)

Query: 499 GLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGL 536
           GL +LH      II+RDLK  N++LD++ + KI+DFG+
Sbjct: 108 GLQFLHSKG---IIYRDLKLDNVMLDRDGHIKIADFGM 142

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 39.8 bits (93), Expect = 0.004
 Identities = 14/29 (48%), Positives = 23/29 (79%)

Query: 508 RLRIIHRDLKTSNILLDQEMNPKISDFGL 536
           ++  IHRD+K  NIL+D++ + K++DFGL
Sbjct: 119 KMGFIHRDIKPDNILIDRDGHIKLTDFGL 147

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

 Score = 39.6 bits (92), Expect = 0.004
 Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 3/46 (6%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMM 541
           +ARG+ +L   +    +HRDL   N+LL Q    KI DFGLA D+M
Sbjct: 246 VARGMEFLASKN---CVHRDLAARNVLLAQGKIVKICDFGLARDIM 288

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 39.3 bits (91), Expect = 0.004
 Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 3/40 (7%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFG 535
           I  G+ YLH +    I+HRD+K +NIL D   N K+ DFG
Sbjct: 115 ILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFG 151

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 39.1 bits (91), Expect = 0.004
 Identities = 44/159 (27%), Positives = 68/159 (42%), Gaps = 33/159 (20%)

Query: 412 KLGKGGFGPVYKAKFPGGQQIAVKRLSSAS---GQGLEEFKNEIETSNSNAT--IGANVK 466
           +LG G FG V   K+ G   +A+K +   S    + +EE K  ++ S+       G   K
Sbjct: 11  ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTK 70

Query: 467 A-----------------FVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRL 509
                             ++RE         S LL  EM  ++  G+A    YL      
Sbjct: 71  QRPIYIVTEYMSNGCLLNYLREHG--KRFQPSQLL--EMCKDVCEGMA----YLESK--- 119

Query: 510 RIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHAS 548
           + IHRDL   N L+D +   K+SDFGL+  ++D +  +S
Sbjct: 120 QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSS 158

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	626
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.93
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.93
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.93
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.92
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.91
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.91
PF00954	110	S_locus_glycop: S-locus glycoprotein family; Inter	99.91
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.91
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.9
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.9
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.89
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.89
KOG3653	534	consensus Transforming growth factor beta/activin	99.89
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.89
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.89
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.89
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.88
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.88
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.88
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.88
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.88
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.87
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.87
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.87
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.86
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.86
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.86
KOG0198	313	consensus MEKK and related serine/threonine protei	99.86
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.86
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.85
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.85
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.85
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.85
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.84
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.84
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.84
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.84
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.84
PHA02988	283	hypothetical protein; Provisional	99.84
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.84
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.84
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.84
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.84
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.84
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.83
KOG0578	550	consensus p21-activated serine/threonine protein k	99.83
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.83
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.83
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.83
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.83
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	99.83
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.83
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.83
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.82
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.82
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.82
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.82
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.82
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.82
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.82
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.82
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.82
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.82
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.82
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.82
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.82
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.82
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.82
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.82
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.82
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.82
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.82
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.82
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.82
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.82
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.82
PTZ00283	496	serine/threonine protein kinase; Provisional	99.82
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.81
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.81
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.81
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.81
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.81
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.81
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.81
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.81
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.81
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.81
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.81
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.81
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.81
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.81
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.81
PHA03209	357	serine/threonine kinase US3; Provisional	99.81
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.8
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.8
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.8
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.8
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.8
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.8
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.8
PHA03212	391	serine/threonine kinase US3; Provisional	99.8
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	99.8
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.8
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.8
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.8
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.8
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.8
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.8
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.8
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.8
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.8
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.8
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.8
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.8
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.8
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.8
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.79
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.79
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.79
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.79
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.79
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.79
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.79
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.79
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.79
KOG0605	550	consensus NDR and related serine/threonine kinases	99.79
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.79
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.79
PHA03211	461	serine/threonine kinase US3; Provisional	99.79
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.79
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.79
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.79
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.79
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.79
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.79
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.79
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.79
PTZ00036	440	glycogen synthase kinase; Provisional	99.79
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.79
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.79
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.78
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.78
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.78
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.78
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.78
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.78
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.78
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.78
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.78
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.78
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.78
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.78
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.78
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.78
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.78
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.78
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.78
PTZ00267	478	NIMA-related protein kinase; Provisional	99.77
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.77
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.77
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.77
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.77
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.77
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.77
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.77
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.77
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.77
PTZ00284	467	protein kinase; Provisional	99.77
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.77
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.77
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.77
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.77
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.77
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.77
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.77
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.77
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.77
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.77
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.77
PHA02882	294	putative serine/threonine kinase; Provisional	99.77
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.77
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.77
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.76
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	99.76
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.76
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.76
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.76
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.76
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.76
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.76
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.76
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.76
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.76
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.76
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.76
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.76
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.76
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.76
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.76
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.76
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.76
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.76
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.76
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.76
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.75
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.75
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.75
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	99.75
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.75
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.75
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.75
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.75
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.75
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.75
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.75
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.75
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.75
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.75
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.75
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.75
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.75
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.75
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.75
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.75
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.75
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.75
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.75
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.75
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.75
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.75
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.75
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.75
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.75
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.75
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.75
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.74
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.74
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.74
PHA03207	392	serine/threonine kinase US3; Provisional	99.74
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.74
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.74
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.74
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.74
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.74
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.74
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.74
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.74
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.74
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.74
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.74
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.74
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.74
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.74
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.74
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.74
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.74
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.74
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.74
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.74
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.73
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.73
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.73
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.73
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.73
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.73
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.73
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.73
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.73
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.73
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.73
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.73
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.73
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.73
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.73
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.73
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.73
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.73
KOG0584	632	consensus Serine/threonine protein kinase [General	99.73
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.73
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.73
KOG0589	426	consensus Serine/threonine protein kinase [General	99.73
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.73
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.73
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.73
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.72
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.72
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.72
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.72
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.72
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.72
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.72
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.72
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.72
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.72
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.72
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.72
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.72
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.72
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.72
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.72
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.72
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.71
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.71
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.71
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.71
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.71
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.71
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.71
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.71
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.71
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.71
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.71
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.71
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.71
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.71
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.71
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.7
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.7
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.7
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.7
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.7
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.7
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.7
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.7
KOG0586	596	consensus Serine/threonine protein kinase [General	99.7
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.7
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.7
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.7
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.7
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.7
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.7
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.7
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.7
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.69
PRK09188	365	serine/threonine protein kinase; Provisional	99.69
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.69
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.69
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.69
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.69
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.69
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.69
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.69
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.69
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.68
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.68
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.68
PLN00009	294	cyclin-dependent kinase A; Provisional	99.68
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.68
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.68
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.68
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.68
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.67
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.67
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.67
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.67
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.67
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.67
PHA03210	501	serine/threonine kinase US3; Provisional	99.67
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.67
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.67
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.66
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.66
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.66
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.66
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.66
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.66
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.65
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.65
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.65
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.65
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.65
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.65
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.65
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.64
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.64
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.64
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.64
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.64
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.63
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.63
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.63
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.63
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.63
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.62
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.62
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.62
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.61
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.59
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.59
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.59
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.58
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.56
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.56
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.56
KOG0610	459	consensus Putative serine/threonine protein kinase	99.56
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.56
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.55
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.54
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.54
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.52
smart00090	237	RIO RIO-like kinase.	99.51
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.51
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.49
PF01453	114	B_lectin: D-mannose binding lectin; InterPro: IPR0	99.49
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.47
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.45
PF08276	66	PAN_2: PAN-like domain; InterPro: IPR013227 PAN do	99.43
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.42
PRK12274	218	serine/threonine protein kinase; Provisional	99.42
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.4
KOG1152	772	consensus Signal transduction serine/threonine kin	99.4
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.39
PRK10345	210	hypothetical protein; Provisional	99.37
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.37
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.37
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.35
PRK14879	211	serine/threonine protein kinase; Provisional	99.35
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.34
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.28
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.25
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.25
cd00129	80	PAN_APPLE PAN/APPLE-like domain; present in N-term	99.24
cd01098	84	PAN_AP_plant Plant PAN/APPLE-like domain; present	99.24
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.24
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.17
PLN00181	793	protein SPA1-RELATED; Provisional	99.13
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.08
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	98.94
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	98.91
KOG0590	601	consensus Checkpoint kinase and related serine/thr	98.89
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	98.89
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	98.87
COG0515	384	SPS1 Serine/threonine protein kinase [General func	98.87
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	98.86
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	98.85
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	98.85
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	98.49
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	98.45
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	98.41
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	98.41
KOG0606	1205	consensus Microtubule-associated serine/threonine	98.37
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	98.28
smart00473	78	PAN_AP divergent subfamily of APPLE domains. Apple	98.09
KOG3087	229	consensus Serine/threonine protein kinase [General	98.09
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	97.98
COG0478	304	RIO-like serine/threonine protein kinase fused to	97.76
COG0661	517	AarF Predicted unusual protein kinase [General fun	97.63
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	97.56
PRK09902	216	hypothetical protein; Provisional	97.56
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	97.37
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	97.24
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	97.19
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	97.14
KOG0590	601	consensus Checkpoint kinase and related serine/thr	97.14
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	97.06
KOG1266	458	consensus Protein kinase [Signal transduction mech	96.97
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	96.95
cd01100	73	APPLE_Factor_XI_like Subfamily of PAN/APPLE-like d	96.91
KOG1235	538	consensus Predicted unusual protein kinase [Genera	96.81
PF01636	239	APH: Phosphotransferase enzyme family This family	96.68
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	96.65
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	96.6
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	96.48
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	96.41
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	95.93
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	95.78
PF11883	48	DUF3403: Domain of unknown function (DUF3403); Int	95.33
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	94.91
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	94.87
smart00108	114	B_lectin Bulb-type mannose-specific lectin.	94.66
KOG4258	1025	consensus Insulin/growth factor receptor (contains	94.59
KOG2268	465	consensus Serine/threonine protein kinase [Signal	94.51
PRK05231	319	homoserine kinase; Provisional	94.4
COG4248	637	Uncharacterized protein with protein kinase and he	94.39
PF08693	40	SKG6: Transmembrane alpha-helix domain; InterPro:	94.27
smart00108	114	B_lectin Bulb-type mannose-specific lectin.	93.9
cd00028	116	B_lectin Bulb-type mannose-specific lectin. The do	93.41
KOG1243	690	consensus Protein kinase [General function predict	93.4
PLN02876	822	acyl-CoA dehydrogenase	93.38
PF01453	114	B_lectin: D-mannose binding lectin; InterPro: IPR0	92.95
PRK09550	401	mtnK methylthioribose kinase; Reviewed	92.77
KOG2137	700	consensus Protein kinase [Signal transduction mech	92.4
KOG2270	520	consensus Serine/threonine protein kinase involved	92.37
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	92.1
PRK10593	297	hypothetical protein; Provisional	91.88
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	91.36
cd00028	116	B_lectin Bulb-type mannose-specific lectin. The do	91.34
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	90.2
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	90.08
PRK10271	188	thiK thiamine kinase; Provisional	89.03
PRK06148	1013	hypothetical protein; Provisional	88.97
PF03109	119	ABC1: ABC1 family; InterPro: IPR004147 This entry	88.48
PF08277	71	PAN_3: PAN-like domain; InterPro: IPR006583 PAN do	87.92
PHA03111	444	Ser/Thr kinase; Provisional	87.39
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	86.97
PRK12396	409	5-methylribose kinase; Reviewed	86.79
PF00024	79	PAN_1: PAN domain This Prosite entry concerns appl	86.46
PF14295	51	PAN_4: PAN domain; PDB: 2YIL_E 2YIP_C 2YIO_A.	85.93
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	85.72

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2e-33  Score=291.23  Aligned_cols=195  Identities=44%  Similarity=0.707  Sum_probs=168.0

Q ss_pred             CCCccCHHHHHHhhcCccccccccccCeEEEEEEEcCCCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecch
Q 006915          391 DLPFIDFESILAATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGAN  464 (626)
Q Consensus       391 ~~~~~~~~~l~~~~~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~  464 (626)
                      ..+.|++++|..||++|...+.||+|+||.||+|.+++++.||||++.....+...+|.+|++.      +|++.++|+|
T Consensus        61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC  140 (361)
T KOG1187|consen   61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC  140 (361)
T ss_pred             CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence            5678999999999999999999999999999999999999999999886544325669999874      9999999999


Q ss_pred             HHH---HHHhhccccCCCccc--------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEe
Q 006915          465 VKA---FVREMKTFSDPTLSA--------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISD  533 (626)
Q Consensus       465 ~~~---~~~~~~~~~~~~l~~--------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~D  533 (626)
                      .+.   .+.+++++.+++|.+        .|+|.+|++||.++|+||+|||+...++||||||||+|||||+++++||+|
T Consensus       141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsD  220 (361)
T KOG1187|consen  141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSD  220 (361)
T ss_pred             ecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccC
Confidence            852   566677777766532        578999999999999999999999999999999999999999999999999


Q ss_pred             cCcc----------------------------------------------------------------------------
Q 006915          534 FGLA----------------------------------------------------------------------------  537 (626)
Q Consensus       534 FGla----------------------------------------------------------------------------  537 (626)
                      ||+|                                                                            
T Consensus       221 FGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~  300 (361)
T KOG1187|consen  221 FGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEG  300 (361)
T ss_pred             ccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCc
Confidence            9974                                                                            


Q ss_pred             --hhccccccC-CCCCh-HHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 006915          538 --LDMMDQKLH-ASSKP-NEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSE  585 (626)
Q Consensus       538 --~~~~~~~~~-~~~~~-~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~  585 (626)
                        .+++|+++. ..++. .++.++..++.+|++.+|.+||+|.+|+++|+..
T Consensus       301 ~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~  352 (361)
T KOG1187|consen  301 KLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGI  352 (361)
T ss_pred             chhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhh
Confidence              345566655 34443 6788899999999999999999999999999554

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.93  E-value=8.3e-27  Score=250.75  Aligned_cols=181  Identities=28%  Similarity=0.404  Sum_probs=145.2

Q ss_pred             hhcCccccccccccCeEEEEEEEcC------CCcEEEEEEecCCCcc-cHHHHHHHHHh------ccccceecchHH--H
Q 006915          403 ATDNFSEANKLGKGGFGPVYKAKFP------GGQQIAVKRLSSASGQ-GLEEFKNEIET------SNSNATIGANVK--A  467 (626)
Q Consensus       403 ~~~~f~~~~~lG~G~fG~Vy~~~~~------~~~~vAvK~l~~~~~~-~~~~~~~e~~~------~~~~~~~~~~~~--~  467 (626)
                      .+.+....++||+|+||+||+|+..      +.+.||||.++..... ...+|++|+++      +|+|+++|.|..  .
T Consensus       484 ~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P  563 (774)
T KOG1026|consen  484 PRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDP  563 (774)
T ss_pred             chhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCe
Confidence            3445566689999999999999863      3568999999976554 77889888764      999999999886  5


Q ss_pred             HHHhhccccCCCcccC--------------------CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCC
Q 006915          468 FVREMKTFSDPTLSAL--------------------LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEM  527 (626)
Q Consensus       468 ~~~~~~~~~~~~l~~~--------------------l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~  527 (626)
                      +++++||+..++|.++                    |...+.+.||.|||.||+||-++.   +|||||..+|+||.++.
T Consensus       564 ~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~---FVHRDLATRNCLVge~l  640 (774)
T KOG1026|consen  564 LCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHH---FVHRDLATRNCLVGENL  640 (774)
T ss_pred             eEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCc---ccccchhhhhceeccce
Confidence            6666777766655433                    567889999999999999999886   99999999999999999


Q ss_pred             cEEEEecCcchhccccc---------------------------------------------------------------
Q 006915          528 NPKISDFGLALDMMDQK---------------------------------------------------------------  544 (626)
Q Consensus       528 ~~kl~DFGla~~~~~~~---------------------------------------------------------------  544 (626)
                      .+||+||||++++....                                                               
T Consensus       641 ~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~~  720 (774)
T KOG1026|consen  641 VVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIRA  720 (774)
T ss_pred             EEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHHc
Confidence            99999999993322111                                                               


Q ss_pred             -cCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 006915          545 -LHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEA  586 (626)
Q Consensus       545 -~~~~~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~  586 (626)
                       -.-..+..++.++..++..||+.+|.+||+++||-..|+...
T Consensus       721 g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~  763 (774)
T KOG1026|consen  721 GQLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWA  763 (774)
T ss_pred             CCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHH
Confidence             112233445567899999999999999999999999998874

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.93  E-value=2e-26  Score=242.94  Aligned_cols=192  Identities=24%  Similarity=0.331  Sum_probs=150.3

Q ss_pred             ccccccccccCeEEEEEEEcCC----CcEEEEEEecCC-CcccHHHHHHHHH------hccccceecchHH--HHHHhhc
Q 006915          407 FSEANKLGKGGFGPVYKAKFPG----GQQIAVKRLSSA-SGQGLEEFKNEIE------TSNSNATIGANVK--AFVREMK  473 (626)
Q Consensus       407 f~~~~~lG~G~fG~Vy~~~~~~----~~~vAvK~l~~~-~~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~~  473 (626)
                      ..+.+.||.|.||+||+|+++-    ...||||.|+.. .+....+|+.|..      |+|++++.|....  ..+...|
T Consensus       631 i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTE  710 (996)
T KOG0196|consen  631 VKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITE  710 (996)
T ss_pred             eEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhh
Confidence            3567899999999999999842    457999999965 3456778998865      4899998886543  3334445


Q ss_pred             cccCCCcccC-------CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhc------
Q 006915          474 TFSDPTLSAL-------LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM------  540 (626)
Q Consensus       474 ~~~~~~l~~~-------l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~------  540 (626)
                      ++.++.|..+       +.+.+...++++||.||.||-+.+   +|||||.++|||++.+..+|++||||++.+      
T Consensus       711 yMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~---YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~  787 (996)
T KOG0196|consen  711 YMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA  787 (996)
T ss_pred             hhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcC---chhhhhhhhheeeccceEEEeccccceeecccCCCc
Confidence            6666665554       457778899999999999999998   999999999999999999999999999322      


Q ss_pred             -----------------------------------------------------------cccccCCCCChHHHHHHHHHH
Q 006915          541 -----------------------------------------------------------MDQKLHASSKPNEILKCINVG  561 (626)
Q Consensus       541 -----------------------------------------------------------~~~~~~~~~~~~~~~~~~~~~  561 (626)
                                                                                 ++..+.-..+.+++..+.++|
T Consensus       788 ~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyRLPpPmDCP~aL~qLM  867 (996)
T KOG0196|consen  788 AYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYRLPPPMDCPAALYQLM  867 (996)
T ss_pred             cccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhccCCCCCCCCcHHHHHHH
Confidence                                                                       222333344556777899999


Q ss_pred             HHhcccCCCCCCCHHHHHHHhccccccCCCCCCCceeeec
Q 006915          562 LLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAFVIRR  601 (626)
Q Consensus       562 ~~C~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~P~~~~~~  601 (626)
                      +.|||.|..+||.+.++|.+|.+++....+.+..+....+
T Consensus       868 ldCWqkdR~~RP~F~qiV~~lDklIrnP~SLk~~~~~~~r  907 (996)
T KOG0196|consen  868 LDCWQKDRNRRPKFAQIVSTLDKLIRNPNSLKTIAPESPR  907 (996)
T ss_pred             HHHHHHHhhcCCCHHHHHHHHHHHhcCchhhcccCCCCCC
Confidence            9999999999999999999999987776666555444433

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.93  E-value=3e-26  Score=235.22  Aligned_cols=177  Identities=28%  Similarity=0.418  Sum_probs=144.0

Q ss_pred             CccccccccccCeEEEEEEEcCCCcEEEEEEecCCCcccHHHHHHHHH------hccccceecchHH--HHHHhhccccC
Q 006915          406 NFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIE------TSNSNATIGANVK--AFVREMKTFSD  477 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~~~~~~  477 (626)
                      .+...+.||+|.||+||+|+++....||||.++... ...+.|.+|++      |.+++++.+.|..  .+..++|++..
T Consensus       207 ~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~  285 (468)
T KOG0197|consen  207 ELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPK  285 (468)
T ss_pred             HHHHHHHhcCCccceEEEEEEcCCCcccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEeccc
Confidence            345568999999999999999888899999998753 34566777765      4889999998887  35677888888


Q ss_pred             CCcccCC--------CHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchh----------
Q 006915          478 PTLSALL--------HWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALD----------  539 (626)
Q Consensus       478 ~~l~~~l--------~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~----------  539 (626)
                      ++|..+|        ...+.+.++.|||+||+||++++   +|||||.++||||+++..+||+|||||+.          
T Consensus       286 GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~---~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~  362 (468)
T KOG0197|consen  286 GSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKN---YIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASE  362 (468)
T ss_pred             CcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCC---ccchhhhhhheeeccCceEEEcccccccccCCCceeecC
Confidence            8775554        46677899999999999999998   99999999999999999999999999932          


Q ss_pred             -----------------------------------------------------ccccccCCCCChHHHHHHHHHHHHhcc
Q 006915          540 -----------------------------------------------------MMDQKLHASSKPNEILKCINVGLLCVQ  566 (626)
Q Consensus       540 -----------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~C~~  566 (626)
                                                                           .++....-..+..++..+.++|..||+
T Consensus       363 ~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRlp~P~~CP~~vY~lM~~CW~  442 (468)
T KOG0197|consen  363 GGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRLPRPEGCPDEVYELMKSCWH  442 (468)
T ss_pred             CCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcCCCCCCCCHHHHHHHHHHhh
Confidence                                                                 222223333444566778899999999


Q ss_pred             cCCCCCCCHHHHHHHhcccc
Q 006915          567 EDPNDRPTMSDVVIMLGSEA  586 (626)
Q Consensus       567 ~~p~~RPs~~~vl~~L~~~~  586 (626)
                      .+|++|||+..+...|+...
T Consensus       443 ~~P~~RPtF~~L~~~l~~~~  462 (468)
T KOG0197|consen  443 EDPEDRPTFETLREVLEDFF  462 (468)
T ss_pred             CCcccCCCHHHHHHHHHHhh
Confidence            99999999999998887653

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.92  E-value=2e-25  Score=229.83  Aligned_cols=180  Identities=31%  Similarity=0.459  Sum_probs=140.5

Q ss_pred             cccccccCeEEEEEEEcCCCcEEEEEEecCCCcc--cHHHHHHHHH------hccccceecchHHH---HHHhhccccCC
Q 006915          410 ANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQ--GLEEFKNEIE------TSNSNATIGANVKA---FVREMKTFSDP  478 (626)
Q Consensus       410 ~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~--~~~~~~~e~~------~~~~~~~~~~~~~~---~~~~~~~~~~~  478 (626)
                      .+.||+|+||+||+|.+++...||||++......  ..++|.+|+.      |+|+++++|.+...   +..++|++.++
T Consensus        46 ~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~G  125 (362)
T KOG0192|consen   46 EEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGG  125 (362)
T ss_pred             hhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCC
Confidence            3569999999999999966555999999854322  2567888865      49999999998874   56778888888


Q ss_pred             Cccc--------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCC-cEEEEecCcchhcc--------
Q 006915          479 TLSA--------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEM-NPKISDFGLALDMM--------  541 (626)
Q Consensus       479 ~l~~--------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~-~~kl~DFGla~~~~--------  541 (626)
                      ++..        .|++..+++++.|||+||.|||+.+.  ||||||||+|||++.++ .+||+|||+++...        
T Consensus       126 sL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~--iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~~~~~  203 (362)
T KOG0192|consen  126 SLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGP--IIHRDLKSDNILVDLKGKTLKIADFGLSREKVISKTSMTS  203 (362)
T ss_pred             cHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCC--eeecccChhhEEEcCCCCEEEECCCccceeeccccccccC
Confidence            7644        46789999999999999999999863  99999999999999997 99999999982211        


Q ss_pred             --------ccccCC------------------------------------------------CCChHHHHHHHHHHHHhc
Q 006915          542 --------DQKLHA------------------------------------------------SSKPNEILKCINVGLLCV  565 (626)
Q Consensus       542 --------~~~~~~------------------------------------------------~~~~~~~~~~~~~~~~C~  565 (626)
                              .|++..                                                ..+......+..++..||
T Consensus       204 ~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p~~~~~~l~~l~~~CW  283 (362)
T KOG0192|consen  204 VAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPPIPKECPPHLSSLMERCW  283 (362)
T ss_pred             CCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHhC
Confidence                    111100                                                111123346778888899


Q ss_pred             ccCCCCCCCHHHHHHHhccccccCCC
Q 006915          566 QEDPNDRPTMSDVVIMLGSEAMNLAT  591 (626)
Q Consensus       566 ~~~p~~RPs~~~vl~~L~~~~~~~~~  591 (626)
                      +.||..||++.+++.+|+.+......
T Consensus       284 ~~dp~~RP~f~ei~~~l~~~~~~~~~  309 (362)
T KOG0192|consen  284 LVDPSRRPSFLEIVSRLESIMSHISS  309 (362)
T ss_pred             CCCCCcCCCHHHHHHHHHHHHHhhcc
Confidence            99999999999999999987654443

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.91  E-value=6.6e-25  Score=226.55  Aligned_cols=188  Identities=29%  Similarity=0.458  Sum_probs=139.6

Q ss_pred             CHHHHHHhhcCccccccccccCeEEEEEEEcCCCcEEEEEEecCC--CcccHHHHHHHHHh------ccccceecchHHH
Q 006915          396 DFESILAATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSA--SGQGLEEFKNEIET------SNSNATIGANVKA  467 (626)
Q Consensus       396 ~~~~l~~~~~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~--~~~~~~~~~~e~~~------~~~~~~~~~~~~~  467 (626)
                      +.++..+.-+.+.+...||+|.||+||+|++.+  .||||+++..  .....+.|++|+..      .|++-++|++...
T Consensus       383 s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p  460 (678)
T KOG0193|consen  383 SLEEWEIPPEEVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNP  460 (678)
T ss_pred             cccccccCHHHhhccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCC
Confidence            335555556666778899999999999999953  6999999854  34577899999875      6777777777652


Q ss_pred             HHHhhcc-ccCCCcccCC-------CHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc--
Q 006915          468 FVREMKT-FSDPTLSALL-------HWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA--  537 (626)
Q Consensus       468 ~~~~~~~-~~~~~l~~~l-------~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla--  537 (626)
                      -+.++.. ..+.+|..+|       +..+.+.||.|||+||.|||.++   |||||||..||+|.+++.+||+||||+  
T Consensus       461 ~~AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~---IIHrDLKSnNIFl~~~~kVkIgDFGLatv  537 (678)
T KOG0193|consen  461 PLAIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKN---IIHRDLKSNNIFLHEDLKVKIGDFGLATV  537 (678)
T ss_pred             ceeeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhh---hhhhhccccceEEccCCcEEEecccceee
Confidence            2233322 3355565554       45566789999999999999998   999999999999999999999999998  


Q ss_pred             ----------------------------------------------hhccccccCCC----------------------C
Q 006915          538 ----------------------------------------------LDMMDQKLHAS----------------------S  549 (626)
Q Consensus       538 ----------------------------------------------~~~~~~~~~~~----------------------~  549 (626)
                                                                    .+++...+.-.                      .
T Consensus       538 k~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd~s~~  617 (678)
T KOG0193|consen  538 KTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPDLSKI  617 (678)
T ss_pred             eeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCccchhh
Confidence                                                          11111111100                      0


Q ss_pred             ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccccc
Q 006915          550 KPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMN  588 (626)
Q Consensus       550 ~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~~~  588 (626)
                      .......+.++...||..++++||.+.+|+.+|+.....
T Consensus       618 ~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~  656 (678)
T KOG0193|consen  618 RSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPS  656 (678)
T ss_pred             hccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhc
Confidence            112334677788899999999999999999998777433

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.91  E-value=1.3e-24  Score=213.58  Aligned_cols=172  Identities=24%  Similarity=0.358  Sum_probs=130.7

Q ss_pred             cccccccccCeEEEEEEEcC-CCcEEEEEEecCC-CcccHHHHHHHHHh------ccccceecchHH---HHHHhhcccc
Q 006915          408 SEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSA-SGQGLEEFKNEIET------SNSNATIGANVK---AFVREMKTFS  476 (626)
Q Consensus       408 ~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~-~~~~~~~~~~e~~~------~~~~~~~~~~~~---~~~~~~~~~~  476 (626)
                      +..+.||+|..|+|||++++ +++.+|+|++... .....+++.+|+++      +++|...|....   .+...|||+.
T Consensus        82 e~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMD  161 (364)
T KOG0581|consen   82 ERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMD  161 (364)
T ss_pred             hhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcC
Confidence            34579999999999999995 5889999999533 33455677777775      677777775544   2446789999


Q ss_pred             CCCcccC------CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhcccc-------
Q 006915          477 DPTLSAL------LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQ-------  543 (626)
Q Consensus       477 ~~~l~~~------l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~-------  543 (626)
                      ++++..+      +++...-+|+.+|++||.|||+.  ..||||||||+|||++..|++||+|||.+..+.+.       
T Consensus       162 gGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~--~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS~a~tfvG  239 (364)
T KOG0581|consen  162 GGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEE--RKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNSIANTFVG  239 (364)
T ss_pred             CCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhc--cCeeeccCCHHHeeeccCCCEEeccccccHHhhhhhcccccc
Confidence            9988765      45667778999999999999963  24999999999999999999999999998222111       


Q ss_pred             ----------------------------------ccC-----------------------CCCCh-HHHHHHHHHHHHhc
Q 006915          544 ----------------------------------KLH-----------------------ASSKP-NEILKCINVGLLCV  565 (626)
Q Consensus       544 ----------------------------------~~~-----------------------~~~~~-~~~~~~~~~~~~C~  565 (626)
                                                        +++                       ...+. ....++..++-.|+
T Consensus       240 T~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~FV~~CL  319 (364)
T KOG0581|consen  240 TSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEGEFSPEFRSFVSCCL  319 (364)
T ss_pred             cccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHh
Confidence                                              000                       00111 13456888888999


Q ss_pred             ccCCCCCCCHHHHHHH
Q 006915          566 QEDPNDRPTMSDVVIM  581 (626)
Q Consensus       566 ~~~p~~RPs~~~vl~~  581 (626)
                      +.||.+||++.+++++
T Consensus       320 ~Kdp~~R~s~~qLl~H  335 (364)
T KOG0581|consen  320 RKDPSERPSAKQLLQH  335 (364)
T ss_pred             cCCcccCCCHHHHhcC
Confidence            9999999999999865

>PF00954 S_locus_glycop: S-locus glycoprotein family; InterPro: IPR000858 In Brassicaceae, self-incompatible plants have a self/non-self recognition system, which involves the inability of flowering plants to achieve self-fertilisation

Probab=99.91  E-value=4.5e-24  Score=182.96  Aligned_cols=105  Identities=32%  Similarity=0.703  Sum_probs=95.2

Q ss_pred             EeeCCcCCccccccccccceece----eeeeeeeecCCCCceeEEEEEecCCCceeEEEEEeecccEEEEEecCCCC-eE
Q 006915           75 WRSAESKDVFSSNEIIPYQILNL----LSNFSHSVKPTGKNAVHPNLIVPSIDYSRTRLIMNYTGEIQYWTEDKVKG-WS  149 (626)
Q Consensus        75 w~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rl~l~~dG~l~~~~~~~~~~-W~  149 (626)
                      ||+|+|+|.      .|.++|++    .+.+.|+.+   +.+.+++|...+ ...++|++|+++|++++|.|.+..+ |.
T Consensus         1 wrsG~WnG~------~f~g~p~~~~~~~~~~~fv~~---~~e~~~t~~~~~-~s~~~r~~ld~~G~l~~~~w~~~~~~W~   70 (110)
T PF00954_consen    1 WRSGPWNGQ------RFSGIPEMSSNSLYNYSFVSN---NEEVYYTYSLSN-SSVLSRLVLDSDGQLQRYIWNESTQSWS   70 (110)
T ss_pred             CCccccCCe------EECCcccccccceeEEEEEEC---CCeEEEEEecCC-CceEEEEEEeeeeEEEEEEEecCCCcEE
Confidence            899999998      88888887    567777877   889999999877 6789999999999999999988777 99


Q ss_pred             EEEeccCCCCCCCCCCCCCcccCCCCCCccccCCCCccCC
Q 006915          150 LIWREPRDNCSVFHYCGNFGICNSNHKRKCQCLQGFVPSS  189 (626)
Q Consensus       150 ~~~~~p~~~C~~~~~CG~~g~C~~~~~~~C~C~~Gf~~~~  189 (626)
                      +.|.+|.++||+|+.||+||+|+.+..+.|+||+||+|++
T Consensus        71 ~~~~~p~d~Cd~y~~CG~~g~C~~~~~~~C~Cl~GF~P~n  110 (110)
T PF00954_consen   71 VFWSAPKDQCDVYGFCGPNGICNSNNSPKCSCLPGFEPKN  110 (110)
T ss_pred             EEEEecccCCCCccccCCccEeCCCCCCceECCCCcCCCc
Confidence            9999999999999999999999988888999999999963

This is sporophytically controlled by multiple alleles at a single locus (S). There are a total of 50 different S alleles in Brassica oleracea. S-locus glycoproteins, as well as S-receptor kinases, are in linkage with the S-alleles []. Most of the proteins within this family contain apple-like domain (IPR003609 from INTERPRO), which is predicted to possess protein- and/or carbohydrate-binding functions.; GO: 0048544 recognition of pollen

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.91  E-value=5.6e-24  Score=199.15  Aligned_cols=130  Identities=28%  Similarity=0.429  Sum_probs=98.9

Q ss_pred             cCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCCcc--------cHHHHHHHHHhccccceecchHH--HHHHhhc
Q 006915          405 DNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQ--------GLEEFKNEIETSNSNATIGANVK--AFVREMK  473 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~~--------~~~~~~~e~~~~~~~~~~~~~~~--~~~~~~~  473 (626)
                      ..|...+.||+|.||.||+|+. .+|+.||||+++.....        .+-.+++|++++|++.++...-.  .+..++|
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE   81 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE   81 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence            3577778999999999999987 56999999999854221        12245567777887777653221  2222333


Q ss_pred             ccc------CCCcccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          474 TFS------DPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       474 ~~~------~~~l~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++.      -.+....|...+...++.++++||+|||++.   |+||||||.|+|++.+|.+||+|||+|
T Consensus        82 fm~tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~---IlHRDlKPnNLLis~~g~lKiADFGLA  148 (318)
T KOG0659|consen   82 FMPTDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKW---ILHRDLKPNNLLISSDGQLKIADFGLA  148 (318)
T ss_pred             eccccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhh---hhcccCCccceEEcCCCcEEeecccch
Confidence            332      1223445778888999999999999999998   999999999999999999999999999

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.90  E-value=2.6e-24  Score=204.59  Aligned_cols=125  Identities=25%  Similarity=0.454  Sum_probs=95.1

Q ss_pred             cCccccccccccCeEEEEEEEcCC-CcEEEEEEecCCCc-ccH-HHHHHHH------HhccccceecchHH---------
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFPG-GQQIAVKRLSSASG-QGL-EEFKNEI------ETSNSNATIGANVK---------  466 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~~-~~~vAvK~l~~~~~-~~~-~~~~~e~------~~~~~~~~~~~~~~---------  466 (626)
                      +.|+...++|+|+||.||+++.++ |+.||||++.+... ... +--++|+      +++|+|.++..+-.         
T Consensus         2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE   81 (396)
T KOG0593|consen    2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE   81 (396)
T ss_pred             cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence            356777899999999999999965 99999999975432 222 2223443      44666666543322         


Q ss_pred             ----HHHHhhccccCCCcccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          467 ----AFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       467 ----~~~~~~~~~~~~~l~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                          .++..++.++.+     ++.....+++.|+++|+.|+|+++   +|||||||+||||+.++.+||+|||+|
T Consensus        82 ~~dhTvL~eLe~~p~G-----~~~~~vk~~l~Q~l~ai~~cHk~n---~IHRDIKPENILit~~gvvKLCDFGFA  148 (396)
T KOG0593|consen   82 YCDHTVLHELERYPNG-----VPSELVKKYLYQLLKAIHFCHKNN---CIHRDIKPENILITQNGVVKLCDFGFA  148 (396)
T ss_pred             ecchHHHHHHHhccCC-----CCHHHHHHHHHHHHHHhhhhhhcC---eecccCChhheEEecCCcEEeccchhh
Confidence                333344444433     567778899999999999999998   999999999999999999999999999

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.90  E-value=9.4e-25  Score=216.20  Aligned_cols=137  Identities=27%  Similarity=0.406  Sum_probs=111.7

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCC--CcccHH------HHHHHHHhccccceecchHH--HHHHhh
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSA--SGQGLE------EFKNEIETSNSNATIGANVK--AFVREM  472 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~--~~~~~~------~~~~e~~~~~~~~~~~~~~~--~~~~~~  472 (626)
                      ..+|...++||+|+||+||+|+++ ++..||||.+...  .....+      .++.|++|+|+++++.+...  .++.+|
T Consensus         9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM   88 (429)
T KOG0595|consen    9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM   88 (429)
T ss_pred             cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence            457888899999999999999995 5899999999865  222222      45567778999999876654  555788


Q ss_pred             ccccCCCcccC------CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCC------CcEEEEecCcchhc
Q 006915          473 KTFSDPTLSAL------LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQE------MNPKISDFGLALDM  540 (626)
Q Consensus       473 ~~~~~~~l~~~------l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~------~~~kl~DFGla~~~  540 (626)
                      |++.++++..+      +++.....++.|+|.||++||+++   ||||||||+||||+..      -.+||+|||+|+.+
T Consensus        89 EyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~---IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L  165 (429)
T KOG0595|consen   89 EYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENN---IIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFL  165 (429)
T ss_pred             EeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCcceEEeccCCCCCCCceEEecccchhhhC
Confidence            99998888654      667888899999999999999998   9999999999999764      45899999999766


Q ss_pred             ccc
Q 006915          541 MDQ  543 (626)
Q Consensus       541 ~~~  543 (626)
                      -..
T Consensus       166 ~~~  168 (429)
T KOG0595|consen  166 QPG  168 (429)
T ss_pred             Cch
Confidence            543

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.89  E-value=2.3e-23  Score=207.83  Aligned_cols=145  Identities=30%  Similarity=0.438  Sum_probs=116.3

Q ss_pred             hhcCCCCCccCHHHHHHhhcCccccccccccCeEEEEEEEcCCCcEEEEEEecCCCcccHHHHHHHHHhccccceecchH
Q 006915          386 EKQGIDLPFIDFESILAATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANV  465 (626)
Q Consensus       386 ~~~~~~~~~~~~~~l~~~~~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~e~~~~~~~~~~~~~~  465 (626)
                      ...+.++|.+--..+.   ....+.+.||+|.||+||+|+++ |+.||||++..   ..+..+.+|.++.+-+.+.|.++
T Consensus       195 SGSGSGlplLVQRTia---rqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~s---rdE~SWfrEtEIYqTvmLRHENI  267 (513)
T KOG2052|consen  195 SGSGSGLPLLVQRTIA---RQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSS---RDERSWFRETEIYQTVMLRHENI  267 (513)
T ss_pred             CCCCCCchhHhHHhhh---heeEEEEEecCccccceeecccc-CCceEEEEecc---cchhhhhhHHHHHHHHHhccchh
Confidence            4556677766554443   35678899999999999999994 78999999975   34567788877755555555555


Q ss_pred             HHHH--------------HhhccccCCCcccCC-----CHHHHHHHHHHHHHHHHHHHhC-----CCCceEecCCCCCCe
Q 006915          466 KAFV--------------REMKTFSDPTLSALL-----HWEMRFNIIIGIARGLLYLHQD-----SRLRIIHRDLKTSNI  521 (626)
Q Consensus       466 ~~~~--------------~~~~~~~~~~l~~~l-----~~~~~~~i~~~ia~gL~yLH~~-----~~~~ivHrDlkp~NI  521 (626)
                      ..|+              .+.+|.+.++|.++|     +....++++..+|.||+|||.+     ++|.|.|||||+.||
T Consensus       268 LgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNI  347 (513)
T KOG2052|consen  268 LGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNRNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNI  347 (513)
T ss_pred             hhhhhccccCCCceEEEEEeeecccCCcHHHHHhhccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccE
Confidence            5444              445777888888775     4677799999999999999976     788999999999999


Q ss_pred             EECCCCcEEEEecCcc
Q 006915          522 LLDQEMNPKISDFGLA  537 (626)
Q Consensus       522 Ll~~~~~~kl~DFGla  537 (626)
                      |+.+++.+.|+|+|||
T Consensus       348 LVKkn~~C~IADLGLA  363 (513)
T KOG2052|consen  348 LVKKNGTCCIADLGLA  363 (513)
T ss_pred             EEccCCcEEEeeceee
Confidence            9999999999999999

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.89  E-value=3.4e-23  Score=212.24  Aligned_cols=180  Identities=26%  Similarity=0.401  Sum_probs=144.9

Q ss_pred             hhcCccccccccccCeEEEEEEEcCCCcEEEEEEecCCCccc-HHHHHHHHHh------ccccceecchHH--HHHHhhc
Q 006915          403 ATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQG-LEEFKNEIET------SNSNATIGANVK--AFVREMK  473 (626)
Q Consensus       403 ~~~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~-~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~  473 (626)
                      +.....+.++||+|.||+|.++....+..||||.++...... ..+|..|++.      +|+++++|.|+.  .+...++
T Consensus       536 PRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~E  615 (807)
T KOG1094|consen  536 PRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITE  615 (807)
T ss_pred             chhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHH
Confidence            344556778999999999999999888999999999765544 4889999875      999999999886  6777888


Q ss_pred             cccCCCcccCCC--------HHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhccccc-
Q 006915          474 TFSDPTLSALLH--------WEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQK-  544 (626)
Q Consensus       474 ~~~~~~l~~~l~--------~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~-  544 (626)
                      ++..+++.++|.        -..-++|+.|||.||+||.+.+   +|||||.++|||+|.++++||+|||+++.+.... 
T Consensus       616 YmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~n---fVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~y  692 (807)
T KOG1094|consen  616 YMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLN---FVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDY  692 (807)
T ss_pred             HHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhc---hhhccccccceeecCcccEEecCcccccccccCCc
Confidence            888888766543        3345789999999999999987   9999999999999999999999999993211100 


Q ss_pred             --------------------------------------------------------------------c---CCCCChHH
Q 006915          545 --------------------------------------------------------------------L---HASSKPNE  553 (626)
Q Consensus       545 --------------------------------------------------------------------~---~~~~~~~~  553 (626)
                                                                                          -   -...+..+
T Consensus       693 y~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P~~c  772 (807)
T KOG1094|consen  693 YRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSRPPAC  772 (807)
T ss_pred             eeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccCCCcC
Confidence                                                                                0   00112334


Q ss_pred             HHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 006915          554 ILKCINVGLLCVQEDPNDRPTMSDVVIMLGSE  585 (626)
Q Consensus       554 ~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~  585 (626)
                      ...+.++++.||..+..+||+++++...|...
T Consensus       773 p~~lyelml~Cw~~es~~RPsFe~lh~~lq~~  804 (807)
T KOG1094|consen  773 PQGLYELMLRCWRRESEQRPSFEQLHLFLQED  804 (807)
T ss_pred             cHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence            45788999999999999999999999888654

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.89  E-value=8.7e-23  Score=205.25  Aligned_cols=127  Identities=30%  Similarity=0.484  Sum_probs=101.8

Q ss_pred             ccccccccccCeEEEEEEEcCCCcEEEEEEecCCCcccHHHHHHHHHhccccceecchHHH--------------HHHhh
Q 006915          407 FSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVKA--------------FVREM  472 (626)
Q Consensus       407 f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~--------------~~~~~  472 (626)
                      ..+.++||+|.||.||||++. ++.||||++..   +..+.|++|-++..+..+.+.++..              ++.++
T Consensus       212 l~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~---~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt  287 (534)
T KOG3653|consen  212 LQLLELIGRGRFGCVWKAQLD-NRLVAVKIFPE---QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVT  287 (534)
T ss_pred             hhhHHHhhcCccceeehhhcc-CceeEEEecCH---HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEe
Confidence            345578999999999999995 59999999975   4556788886664444444444433              33455


Q ss_pred             ccccCCCcccC-----CCHHHHHHHHHHHHHHHHHHHhC------CCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          473 KTFSDPTLSAL-----LHWEMRFNIIIGIARGLLYLHQD------SRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       473 ~~~~~~~l~~~-----l~~~~~~~i~~~ia~gL~yLH~~------~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++...++|.++     ++|....+|+..+++||+|||+.      .+++|+|||||++||||.+|+++.|+|||||
T Consensus       288 ~fh~kGsL~dyL~~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLA  363 (534)
T KOG3653|consen  288 EFHPKGSLCDYLKANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLA  363 (534)
T ss_pred             eeccCCcHHHHHHhccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeecccee
Confidence            66667777665     56999999999999999999987      3568999999999999999999999999999

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.89  E-value=3.6e-24  Score=215.31  Aligned_cols=130  Identities=31%  Similarity=0.396  Sum_probs=97.3

Q ss_pred             hcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCCcccHHHH--HHHHH-------hccccceecchHH---HHHH
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQGLEEF--KNEIE-------TSNSNATIGANVK---AFVR  470 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~~~~~~~--~~e~~-------~~~~~~~~~~~~~---~~~~  470 (626)
                      .++|...++||.|.||.||+|+- .+++.||||++++.-.. .++.  ++|++       ++|++.+.....+   .++.
T Consensus         9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s-~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~f   87 (538)
T KOG0661|consen    9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYF   87 (538)
T ss_pred             HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc-HHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEee
Confidence            45788889999999999999986 56899999999864322 2222  23332       4566655443322   1112


Q ss_pred             hhcccc------CCCcccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          471 EMKTFS------DPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       471 ~~~~~~------~~~l~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++|++.      -.....+++......|+.||++||+|+|.+|   +.|||+||+|||+..+..+||+|||||
T Consensus        88 VfE~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~G---fFHRDlKPENiLi~~~~~iKiaDFGLA  157 (538)
T KOG0661|consen   88 VFEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHG---FFHRDLKPENILISGNDVIKIADFGLA  157 (538)
T ss_pred             eHHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcC---cccccCChhheEecccceeEecccccc
Confidence            222222      1223667899999999999999999999999   999999999999999999999999999

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.89  E-value=2.4e-23  Score=232.15  Aligned_cols=180  Identities=30%  Similarity=0.448  Sum_probs=143.8

Q ss_pred             cCccccccccccCeEEEEEEEcCC--C----cEEEEEEecCC-CcccHHHHHHHHH------hccccceecchHH--HHH
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFPG--G----QQIAVKRLSSA-SGQGLEEFKNEIE------TSNSNATIGANVK--AFV  469 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~~--~----~~vAvK~l~~~-~~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~  469 (626)
                      .+.+..+.||+|.||.||+|.+.+  +    ..||||.+++. +.+...+|.+|..      |+|+++++|.++.  ..+
T Consensus       692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~  771 (1025)
T KOG1095|consen  692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPL  771 (1025)
T ss_pred             hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcE
Confidence            345667899999999999998743  3    35999999865 4566778888854      5999999999987  444


Q ss_pred             HhhccccCCCcccC-------------CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCc
Q 006915          470 REMKTFSDPTLSAL-------------LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGL  536 (626)
Q Consensus       470 ~~~~~~~~~~l~~~-------------l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl  536 (626)
                      ..++++.+++|..+             |.....+.++.|||+|+.||+++.   +|||||.++|+||+....+||+||||
T Consensus       772 i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~---fvHRDLAaRNCLL~~~r~VKIaDFGl  848 (1025)
T KOG1095|consen  772 ILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKH---FVHRDLAARNCLLDERRVVKIADFGL  848 (1025)
T ss_pred             EEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCC---CcCcchhhhheeecccCcEEEcccch
Confidence            56777877777554             456778999999999999999987   99999999999999999999999999


Q ss_pred             chhcccccc----------------------------------------------------------------CCCCChH
Q 006915          537 ALDMMDQKL----------------------------------------------------------------HASSKPN  552 (626)
Q Consensus       537 a~~~~~~~~----------------------------------------------------------------~~~~~~~  552 (626)
                      |+++.+..+                                                                .-..+..
T Consensus       849 ArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~ggRL~~P~~  928 (1025)
T KOG1095|consen  849 ARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGGRLDPPSY  928 (1025)
T ss_pred             hHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCCccCCCCC
Confidence            954432211                                                                1122334


Q ss_pred             HHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccc
Q 006915          553 EILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAM  587 (626)
Q Consensus       553 ~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~~  587 (626)
                      +...+.+++..||+.+|++||++..++..+..+..
T Consensus       929 CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~  963 (1025)
T KOG1095|consen  929 CPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISN  963 (1025)
T ss_pred             CChHHHHHHHHHccCChhhCccHHHHHhhhhhhhh
Confidence            45678899999999999999999999998877643

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.89  E-value=4.3e-23  Score=214.23  Aligned_cols=130  Identities=34%  Similarity=0.431  Sum_probs=107.9

Q ss_pred             cCccccccccccCeEEEEEEEc-CCCcEEEEEEecCC---CcccHHHHHHHHHh------ccccceecchHH--HHHHhh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSA---SGQGLEEFKNEIET------SNSNATIGANVK--AFVREM  472 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~---~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~  472 (626)
                      ..|...+.||+|||..||+++. ..|+.||+|++.+.   .....+...+||++      +|+|+++++.-.  ..+.++
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL   97 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL   97 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence            4688899999999999999998 77999999999863   23445666777664      888988886554  334455


Q ss_pred             ccccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          473 KTFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       473 ~~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      |....+++.      +.|.+.+...++.||+.||.|||+++   |||||||..|++|+++.++||+|||||
T Consensus        98 ELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~---IiHRDLKLGNlfL~~~~~VKIgDFGLA  165 (592)
T KOG0575|consen   98 ELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLG---IIHRDLKLGNLFLNENMNVKIGDFGLA  165 (592)
T ss_pred             EecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcC---ceecccchhheeecCcCcEEeccccee
Confidence            666665553      45778888999999999999999998   999999999999999999999999999

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.88  E-value=7.6e-23  Score=202.42  Aligned_cols=131  Identities=30%  Similarity=0.378  Sum_probs=103.0

Q ss_pred             hcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCCcc-------cHHHHHHHHH------hccccceecchHH--H
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQ-------GLEEFKNEIE------TSNSNATIGANVK--A  467 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~~-------~~~~~~~e~~------~~~~~~~~~~~~~--~  467 (626)
                      .+.|.+.+.||+|+||.|-+|.- ++|+.||||.+++....       ......+|++      |++++++.+....  .
T Consensus       171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds  250 (475)
T KOG0615|consen  171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDS  250 (475)
T ss_pred             cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCc
Confidence            34577889999999999999976 56999999999753111       1122345554      5788888765443  4


Q ss_pred             HHHhhccccCCCcccC------CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCC---CcEEEEecCcc
Q 006915          468 FVREMKTFSDPTLSAL------LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQE---MNPKISDFGLA  537 (626)
Q Consensus       468 ~~~~~~~~~~~~l~~~------l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~---~~~kl~DFGla  537 (626)
                      ++.+||++.++.+.+.      +....-..++.|++.|+.|||+.|   |+||||||+||||..+   -.+||+|||+|
T Consensus       251 ~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~G---I~HRDiKPeNILl~~~~e~~llKItDFGlA  326 (475)
T KOG0615|consen  251 SYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQG---IIHRDIKPENILLSNDAEDCLLKITDFGLA  326 (475)
T ss_pred             eEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcC---cccccCCcceEEeccCCcceEEEecccchh
Confidence            5678899998887543      556666779999999999999999   9999999999999766   67999999999

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.88  E-value=5.5e-23  Score=214.64  Aligned_cols=184  Identities=29%  Similarity=0.394  Sum_probs=140.9

Q ss_pred             hcCccccccccccCeEEEEEEEcCC--C--cE-EEEEEecC---CCcccHHHHHHHHH------hccccceecchHH--H
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFPG--G--QQ-IAVKRLSS---ASGQGLEEFKNEIE------TSNSNATIGANVK--A  467 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~~--~--~~-vAvK~l~~---~~~~~~~~~~~e~~------~~~~~~~~~~~~~--~  467 (626)
                      .++....++||+|+||+||+|++..  +  .. ||||..+.   .......+|.+|.+      |+|+++++|.+..  .
T Consensus       156 H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~P  235 (474)
T KOG0194|consen  156 HSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEP  235 (474)
T ss_pred             ccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCc
Confidence            3444555899999999999998843  2  23 89999985   23456677777765      4899999997765  6


Q ss_pred             HHHhhccccCCCcccC-------CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhc
Q 006915          468 FVREMKTFSDPTLSAL-------LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM  540 (626)
Q Consensus       468 ~~~~~~~~~~~~l~~~-------l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~  540 (626)
                      ++..+|...++++.++       ++..+++.++.+.|.||+|||+++   +|||||.++|+|++.++.+||+||||++.-
T Consensus       236 l~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~---~IHRDIAARNcL~~~~~~vKISDFGLs~~~  312 (474)
T KOG0194|consen  236 LMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKN---CIHRDIAARNCLYSKKGVVKISDFGLSRAG  312 (474)
T ss_pred             cEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCC---CcchhHhHHHheecCCCeEEeCccccccCC
Confidence            6677888888777554       668899999999999999999998   999999999999999999999999998110


Q ss_pred             ---------------------------------------------------------------cccccCCCCChHHHHHH
Q 006915          541 ---------------------------------------------------------------MDQKLHASSKPNEILKC  557 (626)
Q Consensus       541 ---------------------------------------------------------------~~~~~~~~~~~~~~~~~  557 (626)
                                                                                     .....+...+......+
T Consensus       313 ~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~~~~~p~~~  392 (474)
T KOG0194|consen  313 SQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMPIPSKTPKEL  392 (474)
T ss_pred             cceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCCCCCCCHHHH
Confidence                                                                           01111112222334456


Q ss_pred             HHHHHHhcccCCCCCCCHHHHHHHhccccccCC
Q 006915          558 INVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLA  590 (626)
Q Consensus       558 ~~~~~~C~~~~p~~RPs~~~vl~~L~~~~~~~~  590 (626)
                      ..++..||..+|++||+|.++.+.|+.......
T Consensus       393 ~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~  425 (474)
T KOG0194|consen  393 AKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKE  425 (474)
T ss_pred             HHHHHHhccCChhhccCHHHHHHHHHHHHhccc
Confidence            667779999999999999999999988754333

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.88  E-value=6.1e-23  Score=214.18  Aligned_cols=182  Identities=31%  Similarity=0.415  Sum_probs=130.4

Q ss_pred             hhcCccccccccccCeEEEEEEEc------CCCcEEEEEEecCCCc-ccHHHHHHHHH-------hccccceecchHH--
Q 006915          403 ATDNFSEANKLGKGGFGPVYKAKF------PGGQQIAVKRLSSASG-QGLEEFKNEIE-------TSNSNATIGANVK--  466 (626)
Q Consensus       403 ~~~~f~~~~~lG~G~fG~Vy~~~~------~~~~~vAvK~l~~~~~-~~~~~~~~e~~-------~~~~~~~~~~~~~--  466 (626)
                      +.++|.+.+.||+|+||.||+|.+      ..++.||||+++.... .....+.+|+.       ++|++.+.+.+..  
T Consensus         5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~   84 (338)
T cd05102           5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPN   84 (338)
T ss_pred             chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC
Confidence            356788899999999999999974      2356899999975432 23345666653       5777777765432  


Q ss_pred             -HHHHhhccccCCCcc----------------------------------------------------------------
Q 006915          467 -AFVREMKTFSDPTLS----------------------------------------------------------------  481 (626)
Q Consensus       467 -~~~~~~~~~~~~~l~----------------------------------------------------------------  481 (626)
                       .++..++++.++++.                                                                
T Consensus        85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (338)
T cd05102          85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD  164 (338)
T ss_pred             CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence             122334444443331                                                                


Q ss_pred             ----cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhcc----------------
Q 006915          482 ----ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMM----------------  541 (626)
Q Consensus       482 ----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~----------------  541 (626)
                          ..+.+...+.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++.+.                
T Consensus       165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~  241 (338)
T cd05102         165 DLWKSPLTMEDLICYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLK  241 (338)
T ss_pred             ccccCCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCcc
Confidence                23667788899999999999999987   9999999999999999999999999883221                


Q ss_pred             --cccc-----------------------C-CCC-----------------------ChHHHHHHHHHHHHhcccCCCCC
Q 006915          542 --DQKL-----------------------H-ASS-----------------------KPNEILKCINVGLLCVQEDPNDR  572 (626)
Q Consensus       542 --~~~~-----------------------~-~~~-----------------------~~~~~~~~~~~~~~C~~~~p~~R  572 (626)
                        .++.                       . ...                       +......+..++..||+.+|.+|
T Consensus       242 y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R  321 (338)
T cd05102         242 WMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRAPENATPEIYRIMLACWQGDPKER  321 (338)
T ss_pred             ccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCChhhC
Confidence              0100                       0 000                       00112346778889999999999


Q ss_pred             CCHHHHHHHhccccc
Q 006915          573 PTMSDVVIMLGSEAM  587 (626)
Q Consensus       573 Ps~~~vl~~L~~~~~  587 (626)
                      |++.++++.|+.+..
T Consensus       322 Ps~~el~~~l~~~~~  336 (338)
T cd05102         322 PTFSALVEILGDLLQ  336 (338)
T ss_pred             cCHHHHHHHHHHHHh
Confidence            999999999987643

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.88  E-value=1e-22  Score=220.44  Aligned_cols=181  Identities=25%  Similarity=0.348  Sum_probs=143.9

Q ss_pred             hcCccccccccccCeEEEEEEEcCCC-cEEEEEEecCCCcccHHHHHHHHHh-------ccccceecchH---------H
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFPGG-QQIAVKRLSSASGQGLEEFKNEIET-------SNSNATIGANV---------K  466 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~~~-~~vAvK~l~~~~~~~~~~~~~e~~~-------~~~~~~~~~~~---------~  466 (626)
                      ..+.++.+.|.+|||+.||.++...+ ..+|+|++-..++..++...+|++.       +|+|.+++...         .
T Consensus        36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~  115 (738)
T KOG1989|consen   36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVW  115 (738)
T ss_pred             CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCcee
Confidence            44677889999999999999998665 9999999987788888889999875       77777776211         1


Q ss_pred             HHHHhhccccCCCccc--------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc-
Q 006915          467 AFVREMKTFSDPTLSA--------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA-  537 (626)
Q Consensus       467 ~~~~~~~~~~~~~l~~--------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla-  537 (626)
                      +++..||++.++.+.+        .|.+.++++|+.++++|+++||.. .+||||||||.+||||+.++..||||||.| 
T Consensus       116 EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFGSat  194 (738)
T KOG1989|consen  116 EVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFGSAT  194 (738)
T ss_pred             EEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCcccccc
Confidence            3445566666555433        477899999999999999999998 589999999999999999999999999998 


Q ss_pred             ---------------------------------------------------------------------hhccccccCCC
Q 006915          538 ---------------------------------------------------------------------LDMMDQKLHAS  548 (626)
Q Consensus       538 ---------------------------------------------------------------------~~~~~~~~~~~  548 (626)
                                                                                           ..+++..+.-.
T Consensus       195 t~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~laIlng~Y~~P  274 (738)
T KOG1989|consen  195 TKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLAILNGNYSFP  274 (738)
T ss_pred             cccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcceeEEeccccCC
Confidence                                                                                 11222222222


Q ss_pred             CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 006915          549 SKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSE  585 (626)
Q Consensus       549 ~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~  585 (626)
                      ..+.....+..++..||+.+|.+||++.+|+..+-.+
T Consensus       275 ~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l  311 (738)
T KOG1989|consen  275 PFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFEL  311 (738)
T ss_pred             CCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHH
Confidence            2345677888899999999999999999998776554

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.88  E-value=1.3e-22  Score=188.22  Aligned_cols=182  Identities=25%  Similarity=0.347  Sum_probs=138.8

Q ss_pred             hhcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHHH-------H
Q 006915          403 ATDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVKA-------F  468 (626)
Q Consensus       403 ~~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~~-------~  468 (626)
                      ..++|.+.++||+|||.-||+++. .+++.+|+|++.-...++.+..++|++.      +++++++...+..       .
T Consensus        19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~   98 (302)
T KOG2345|consen   19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEA   98 (302)
T ss_pred             cCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeE
Confidence            456799999999999999999985 5689999999987776778888888775      5555555444331       1


Q ss_pred             HHhhccccCCCc----------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc-
Q 006915          469 VREMKTFSDPTL----------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA-  537 (626)
Q Consensus       469 ~~~~~~~~~~~l----------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla-  537 (626)
                      +..+.++..+++          ...+++.+.+.|+.+|++||++||+.. ++++||||||.|||+.+.+.++|.|||.+ 
T Consensus        99 yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~-~~yAH~DiKP~NILls~~~~~vl~D~GS~~  177 (302)
T KOG2345|consen   99 YLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKE-PPYAHRDIKPANILLSDSGLPVLMDLGSAT  177 (302)
T ss_pred             EEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccC-CcccccCCCcceeEecCCCceEEEeccCcc
Confidence            122344444443          235778999999999999999999985 68999999999999999999999999987 


Q ss_pred             ---------------------------------------------------------------------------hhccc
Q 006915          538 ---------------------------------------------------------------------------LDMMD  542 (626)
Q Consensus       538 ---------------------------------------------------------------------------~~~~~  542 (626)
                                                                                                 ..+..
T Consensus       178 ~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~n  257 (302)
T KOG2345|consen  178 QAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAVQN  257 (302)
T ss_pred             ccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEeeec
Confidence                                                                                       00111


Q ss_pred             cccCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 006915          543 QKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSE  585 (626)
Q Consensus       543 ~~~~~~~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~  585 (626)
                      +.+.........+.+.++..+|++.||.+||++.+++..+...
T Consensus       258 ~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L  300 (302)
T KOG2345|consen  258 AQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL  300 (302)
T ss_pred             cccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence            1222222233556788999999999999999999999888654

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.87  E-value=2.8e-23  Score=213.60  Aligned_cols=177  Identities=24%  Similarity=0.378  Sum_probs=144.1

Q ss_pred             CccccccccccCeEEEEEEEcCC-CcEEEEEEecCCCcccHHHHHH------HHHhccccceecchHH--HHHHhhcccc
Q 006915          406 NFSEANKLGKGGFGPVYKAKFPG-GQQIAVKRLSSASGQGLEEFKN------EIETSNSNATIGANVK--AFVREMKTFS  476 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~~-~~~vAvK~l~~~~~~~~~~~~~------e~~~~~~~~~~~~~~~--~~~~~~~~~~  476 (626)
                      +.....+||.|.||.||.|.++. .-.||||.+++.. ...++|+.      |++++|+|+++|.|..  .|+.+.+++.
T Consensus       268 dItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt-MeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~  346 (1157)
T KOG4278|consen  268 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMC  346 (1157)
T ss_pred             heeeeeccCCCcccceeeeeeeccceeeehhhhhhcc-hhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEeccc
Confidence            44556899999999999999854 6789999998754 34566655      5667999999999876  5677778888


Q ss_pred             CCCcccCCCHH--------HHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcch----------
Q 006915          477 DPTLSALLHWE--------MRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLAL----------  538 (626)
Q Consensus       477 ~~~l~~~l~~~--------~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~----------  538 (626)
                      .++|.++|...        ..+.+|.||+.||+||..++   +|||||.++|+|+.++..+||+||||++          
T Consensus       347 yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkkn---FIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAH  423 (1157)
T KOG4278|consen  347 YGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAH  423 (1157)
T ss_pred             CccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhh---hhhhhhhhhhccccccceEEeeccchhhhhcCCceecc
Confidence            88887776543        34678999999999999988   9999999999999999999999999982          


Q ss_pred             -----------------------------------------------------hccccccCCCCChHHHHHHHHHHHHhc
Q 006915          539 -----------------------------------------------------DMMDQKLHASSKPNEILKCINVGLLCV  565 (626)
Q Consensus       539 -----------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~C~  565 (626)
                                                                           .++...+....+..+...+.+++..||
T Consensus       424 AGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgyRM~~PeGCPpkVYeLMraCW  503 (1157)
T KOG4278|consen  424 AGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGYRMDGPEGCPPKVYELMRACW  503 (1157)
T ss_pred             cCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhccccccCCCCCCHHHHHHHHHHh
Confidence                                                                 233334444455567778999999999


Q ss_pred             ccCCCCCCCHHHHHHHhcccc
Q 006915          566 QEDPNDRPTMSDVVIMLGSEA  586 (626)
Q Consensus       566 ~~~p~~RPs~~~vl~~L~~~~  586 (626)
                      +..|.+||+++|+.+.++.+.
T Consensus       504 ~WsPsDRPsFaeiHqafEtmf  524 (1157)
T KOG4278|consen  504 NWSPSDRPSFAEIHQAFETMF  524 (1157)
T ss_pred             cCCcccCccHHHHHHHHHHHh
Confidence            999999999999998877653

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.87  E-value=3.9e-22  Score=202.22  Aligned_cols=131  Identities=27%  Similarity=0.371  Sum_probs=100.8

Q ss_pred             hcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCCc--ccHHHHHHH------HHhccccceecchHH----HHHH
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASG--QGLEEFKNE------IETSNSNATIGANVK----AFVR  470 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~--~~~~~~~~e------~~~~~~~~~~~~~~~----~~~~  470 (626)
                      .+.|+.+++||+|.||.||+|+. .+|+.||+|+++....  ....-..+|      +.|+|++.+.+....    .++.
T Consensus       116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl  195 (560)
T KOG0600|consen  116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL  195 (560)
T ss_pred             hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence            34577779999999999999987 5699999999985432  222333444      445888887764433    3344


Q ss_pred             hhccccC---CCc---ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          471 EMKTFSD---PTL---SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       471 ~~~~~~~---~~l---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +++|+.+   +-+   .-.+...+...++.|++.||+|+|+++   |+|||||.+|||||.+|.+||+|||||
T Consensus       196 VFeYMdhDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~g---vlHRDIK~SNiLidn~G~LKiaDFGLA  265 (560)
T KOG0600|consen  196 VFEYMDHDLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRG---VLHRDIKGSNILIDNNGVLKIADFGLA  265 (560)
T ss_pred             EEecccchhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcC---eeeccccccceEEcCCCCEEeccccce
Confidence            5555542   111   224678899999999999999999998   999999999999999999999999999

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.87  E-value=3.6e-22  Score=188.30  Aligned_cols=181  Identities=23%  Similarity=0.344  Sum_probs=131.1

Q ss_pred             cCccccccccccCeEEEEEEEc-CCCcEEEEEEecCC--CcccHHHHHHHH------HhccccceecchHH----HHHHh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSA--SGQGLEEFKNEI------ETSNSNATIGANVK----AFVRE  471 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~--~~~~~~~~~~e~------~~~~~~~~~~~~~~----~~~~~  471 (626)
                      .+|.+.++||+|.||+||++.. .+|..||.|.++-.  +.+..+....|+      +|+|+++..+..+.    .+..+
T Consensus        19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv   98 (375)
T KOG0591|consen   19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV   98 (375)
T ss_pred             HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence            3577889999999999999976 68999999998732  333444455554      44666666553322    24566


Q ss_pred             hccccCCCccc----------CCCHHHHHHHHHHHHHHHHHHHhCCC-CceEecCCCCCCeEECCCCcEEEEecCcchhc
Q 006915          472 MKTFSDPTLSA----------LLHWEMRFNIIIGIARGLLYLHQDSR-LRIIHRDLKTSNILLDQEMNPKISDFGLALDM  540 (626)
Q Consensus       472 ~~~~~~~~l~~----------~l~~~~~~~i~~~ia~gL~yLH~~~~-~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~  540 (626)
                      |++...+++..          ++++...++++.|+++||.++|..-+ .-|+||||||.||+|+.+|.+||.||||++.+
T Consensus        99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l  178 (375)
T KOG0591|consen   99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFL  178 (375)
T ss_pred             HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHh
Confidence            77777777644          46788899999999999999999421 13999999999999999999999999998211


Q ss_pred             c----------------------------------------------------------ccccCCCC---C-hHHHHHHH
Q 006915          541 M----------------------------------------------------------DQKLHASS---K-PNEILKCI  558 (626)
Q Consensus       541 ~----------------------------------------------------------~~~~~~~~---~-~~~~~~~~  558 (626)
                      -                                                          ...-..++   + ......+.
T Consensus       179 ~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~~~p~~~YS~~l~  258 (375)
T KOG0591|consen  179 SSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDYPPLPDEHYSTDLR  258 (375)
T ss_pred             cchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCCCCCcHHHhhhHHH
Confidence            0                                                          00001111   1 23455777


Q ss_pred             HHHHHhcccCCCCCCCHHHHHHHhccc
Q 006915          559 NVGLLCVQEDPNDRPTMSDVVIMLGSE  585 (626)
Q Consensus       559 ~~~~~C~~~~p~~RPs~~~vl~~L~~~  585 (626)
                      .++..|+..||+.||+...+++.+...
T Consensus       259 ~li~~ci~vd~~~RP~t~~~v~di~~~  285 (375)
T KOG0591|consen  259 ELINMCIAVDPEQRPDTVPYVQDIQSE  285 (375)
T ss_pred             HHHHHHccCCcccCCCcchHHHHHHHH
Confidence            888899999999999976666665553

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.86  E-value=9.4e-22  Score=197.75  Aligned_cols=182  Identities=24%  Similarity=0.320  Sum_probs=135.3

Q ss_pred             HHhhcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCc--------------ccHHHHHHHHHh------ccccc
Q 006915          401 LAATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASG--------------QGLEEFKNEIET------SNSNA  459 (626)
Q Consensus       401 ~~~~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~--------------~~~~~~~~e~~~------~~~~~  459 (626)
                      .+..+.|++.+.||+|.||.|-+|+.. +++.||||++.+...              ...+..++||.+      +|+|+
T Consensus        93 ~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~  172 (576)
T KOG0585|consen   93 RKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVK  172 (576)
T ss_pred             ceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeE
Confidence            345678999999999999999999874 689999999974311              113466677654      77777


Q ss_pred             eecchH----HHHHHhhccccCCCcc-----cC-CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcE
Q 006915          460 TIGANV----KAFVREMKTFSDPTLS-----AL-LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNP  529 (626)
Q Consensus       460 ~~~~~~----~~~~~~~~~~~~~~l~-----~~-l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~  529 (626)
                      ++..--    ..++.+++++..+...     .. |...+..+++.++..||+|||.++   ||||||||+|+||+++|.+
T Consensus       173 LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~Qg---iiHRDIKPsNLLl~~~g~V  249 (576)
T KOG0585|consen  173 LIEVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQG---IIHRDIKPSNLLLSSDGTV  249 (576)
T ss_pred             EEEeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEEcCCCcE
Confidence            775322    2555666766644332     22 788899999999999999999998   9999999999999999999


Q ss_pred             EEEecCcch-----------------------------------------------------------------------
Q 006915          530 KISDFGLAL-----------------------------------------------------------------------  538 (626)
Q Consensus       530 kl~DFGla~-----------------------------------------------------------------------  538 (626)
                      ||+|||.+.                                                                       
T Consensus       250 KIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~  329 (576)
T KOG0585|consen  250 KISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFD  329 (576)
T ss_pred             EeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHH
Confidence            999999871                                                                       


Q ss_pred             hccccccCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 006915          539 DMMDQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSE  585 (626)
Q Consensus       539 ~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~  585 (626)
                      .++...+.....++..+.+.+++...++.||+.|.+..+|....-..
T Consensus       330 KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt  376 (576)
T KOG0585|consen  330 KIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVT  376 (576)
T ss_pred             HHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecceec
Confidence            11111122222233455677788899999999999999997665443

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.86  E-value=7.5e-22  Score=202.79  Aligned_cols=131  Identities=26%  Similarity=0.424  Sum_probs=98.8

Q ss_pred             cCccccccccccCeEEEEEEEcCC-----------------CcEEEEEEecCCC-cccHHHHHHHHHh------ccccce
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFPG-----------------GQQIAVKRLSSAS-GQGLEEFKNEIET------SNSNAT  460 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~~-----------------~~~vAvK~l~~~~-~~~~~~~~~e~~~------~~~~~~  460 (626)
                      ++|.+.++||+|+||.||++.+.+                 +..||||.+.... .....+|.+|++.      +|++++
T Consensus         5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~   84 (304)
T cd05096           5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL   84 (304)
T ss_pred             hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence            467888999999999999997532                 3479999987542 2334567777653      677777


Q ss_pred             ecchHH--HHHHhhccccCCCcc-------------------------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEe
Q 006915          461 IGANVK--AFVREMKTFSDPTLS-------------------------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIH  513 (626)
Q Consensus       461 ~~~~~~--~~~~~~~~~~~~~l~-------------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH  513 (626)
                      .+.+..  .++..++++.++++.                         ..+++...++++.||+.||.|||+.+   |+|
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---ivH  161 (304)
T cd05096          85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN---FVH  161 (304)
T ss_pred             EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC---ccc
Confidence            665432  222334444443332                         23567888999999999999999998   999


Q ss_pred             cCCCCCCeEECCCCcEEEEecCcch
Q 006915          514 RDLKTSNILLDQEMNPKISDFGLAL  538 (626)
Q Consensus       514 rDlkp~NILl~~~~~~kl~DFGla~  538 (626)
                      |||||+|||+++++.+||+|||++.
T Consensus       162 ~dlkp~Nill~~~~~~kl~DfG~~~  186 (304)
T cd05096         162 RDLATRNCLVGENLTIKIADFGMSR  186 (304)
T ss_pred             cCcchhheEEcCCccEEECCCccce
Confidence            9999999999999999999999874

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.86  E-value=8.1e-22  Score=208.46  Aligned_cols=179  Identities=26%  Similarity=0.339  Sum_probs=126.1

Q ss_pred             hcCccccccccccCeEEEEEEEc------CCCcEEEEEEecCCC-cccHHHHHHHHH-------hccccceecchHH--H
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKF------PGGQQIAVKRLSSAS-GQGLEEFKNEIE-------TSNSNATIGANVK--A  467 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~------~~~~~vAvK~l~~~~-~~~~~~~~~e~~-------~~~~~~~~~~~~~--~  467 (626)
                      .++|++.+.||+|+||.||+|+.      ..+..||||+++... ....+.+.+|+.       ++|++++.+.+..  .
T Consensus        34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~  113 (375)
T cd05104          34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP  113 (375)
T ss_pred             hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence            45688889999999999999963      236689999997432 233445666653       5777777765432  1


Q ss_pred             HHHhhccccCCCc-------------------------------------------------------------------
Q 006915          468 FVREMKTFSDPTL-------------------------------------------------------------------  480 (626)
Q Consensus       468 ~~~~~~~~~~~~l-------------------------------------------------------------------  480 (626)
                      .+.+++++.++++                                                                   
T Consensus       114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (375)
T cd05104         114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS  193 (375)
T ss_pred             ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence            1222232222211                                                                   


Q ss_pred             --------------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhcc-----
Q 006915          481 --------------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMM-----  541 (626)
Q Consensus       481 --------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~-----  541 (626)
                                    ...+++..+++++.||+.||.|||+.+   |+||||||+|||+++++.+||+|||++..+.     
T Consensus       194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~  270 (375)
T cd05104         194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIRNDSNY  270 (375)
T ss_pred             ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCchhhEEEECCCcEEEecCccceeccCcccc
Confidence                          123678888999999999999999987   9999999999999999999999999872211     


Q ss_pred             -------------ccc----------------------------cCC-CC------------------ChHHHHHHHHHH
Q 006915          542 -------------DQK----------------------------LHA-SS------------------KPNEILKCINVG  561 (626)
Q Consensus       542 -------------~~~----------------------------~~~-~~------------------~~~~~~~~~~~~  561 (626)
                                   .++                            ... ..                  +......+.+++
T Consensus       271 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  350 (375)
T cd05104         271 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRMLSPECAPSEMYDIM  350 (375)
T ss_pred             cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCCCCCCCCHHHHHHH
Confidence                         000                            000 00                  001123567888


Q ss_pred             HHhcccCCCCCCCHHHHHHHhccc
Q 006915          562 LLCVQEDPNDRPTMSDVVIMLGSE  585 (626)
Q Consensus       562 ~~C~~~~p~~RPs~~~vl~~L~~~  585 (626)
                      ..||+.||.+||++.+++++|+..
T Consensus       351 ~~cl~~dP~~RPs~~eil~~l~~~  374 (375)
T cd05104         351 KSCWDADPLKRPTFKQIVQLIEQQ  374 (375)
T ss_pred             HHHccCChhHCcCHHHHHHHHHhh
Confidence            999999999999999999999753

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.86  E-value=1.7e-21  Score=194.86  Aligned_cols=129  Identities=34%  Similarity=0.478  Sum_probs=103.7

Q ss_pred             CccccccccccCeEEEEEEEcCC-CcEEEEEEecCCCcccHHHHHHHH------Hhccccceecch--HH--HHHHhhcc
Q 006915          406 NFSEANKLGKGGFGPVYKAKFPG-GQQIAVKRLSSASGQGLEEFKNEI------ETSNSNATIGAN--VK--AFVREMKT  474 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~~-~~~vAvK~l~~~~~~~~~~~~~e~------~~~~~~~~~~~~--~~--~~~~~~~~  474 (626)
                      ++...+.||+|+||.||++...+ |+..|||.+...+....+.+.+|+      .++++|+..|..  ..  .+...|++
T Consensus        18 ~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy   97 (313)
T KOG0198|consen   18 NWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEY   97 (313)
T ss_pred             hhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeec
Confidence            46667899999999999998854 899999999865322234444444      457888888752  22  24566788


Q ss_pred             ccCCCccc-------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECC-CCcEEEEecCcc
Q 006915          475 FSDPTLSA-------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQ-EMNPKISDFGLA  537 (626)
Q Consensus       475 ~~~~~l~~-------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~-~~~~kl~DFGla  537 (626)
                      ..++++.+       .|+......++.||++||+|||+++   ||||||||+||||+. ++.+||+|||++
T Consensus        98 ~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g---~vH~DiK~~NiLl~~~~~~~KlaDFG~a  165 (313)
T KOG0198|consen   98 APGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKG---IVHCDIKPANILLDPSNGDVKLADFGLA  165 (313)
T ss_pred             cCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeccCcccceEEEeCCCCeEEeccCccc
Confidence            88877654       4788899999999999999999998   999999999999999 799999999988

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.86  E-value=2.6e-21  Score=229.68  Aligned_cols=188  Identities=28%  Similarity=0.461  Sum_probs=140.4

Q ss_pred             cCHHHHHHhhcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCCcccH--HHHHHHHHhccccceecchHH--HHH
Q 006915          395 IDFESILAATDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQGL--EEFKNEIETSNSNATIGANVK--AFV  469 (626)
Q Consensus       395 ~~~~~l~~~~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~~~~--~~~~~e~~~~~~~~~~~~~~~--~~~  469 (626)
                      ++++++.   ..|...+.||+|+||.||+|+. .++..||||+++.......  .+..+.+.|+|++++++.+..  ..+
T Consensus       683 ~~~~~~~---~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~  759 (968)
T PLN00113        683 ITINDIL---SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIPSSEIADMGKLQHPNIVKLIGLCRSEKGAY  759 (968)
T ss_pred             hhHHHHH---hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccccHHHHHHHhhCCCCCcceEEEEEEcCCCCE
Confidence            4555554   3466778999999999999987 5789999999975433222  233455678999999987754  344


Q ss_pred             HhhccccCCCcccC---CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc---------
Q 006915          470 REMKTFSDPTLSAL---LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA---------  537 (626)
Q Consensus       470 ~~~~~~~~~~l~~~---l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla---------  537 (626)
                      .++|++.++++.+.   ++|..+.+|+.|||+||+|||....++|+||||||+||+++.++.+++. ||.+         
T Consensus       760 lv~Ey~~~g~L~~~l~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~~~~  838 (968)
T PLN00113        760 LIHEYIEGKNLSEVLRNLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTDTKC  838 (968)
T ss_pred             EEEeCCCCCcHHHHHhcCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccCCCc
Confidence            66788888877654   6899999999999999999997766679999999999999999888775 4432         


Q ss_pred             ------------------------------hhcc---------------------------------ccccCC--CCChH
Q 006915          538 ------------------------------LDMM---------------------------------DQKLHA--SSKPN  552 (626)
Q Consensus       538 ------------------------------~~~~---------------------------------~~~~~~--~~~~~  552 (626)
                                                    .+++                                 ++.+..  ..+..
T Consensus       839 ~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  918 (968)
T PLN00113        839 FISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQN  918 (968)
T ss_pred             cccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHH
Confidence                                          0010                                 011100  11234


Q ss_pred             HHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 006915          553 EILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEA  586 (626)
Q Consensus       553 ~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~  586 (626)
                      ++.++.+++..||+.+|++||+|.+++++|+.+.
T Consensus       919 ~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~  952 (968)
T PLN00113        919 EIVEVMNLALHCTATDPTARPCANDVLKTLESAS  952 (968)
T ss_pred             HHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhh
Confidence            5567788999999999999999999999998764

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.85  E-value=1.7e-21  Score=188.03  Aligned_cols=131  Identities=32%  Similarity=0.457  Sum_probs=98.8

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCcc------cHHH--HHHHHHhcccccee----cchHHHHHH
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQ------GLEE--FKNEIETSNSNATI----GANVKAFVR  470 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~------~~~~--~~~e~~~~~~~~~~----~~~~~~~~~  470 (626)
                      .++|+..+.|++|.||.||+|+.. +++.||+|+++.....      .+++  .+..+.|+|+|.+-    |.....++.
T Consensus        75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~  154 (419)
T KOG0663|consen   75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYI  154 (419)
T ss_pred             HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeee
Confidence            456788899999999999999984 6899999999853221      1222  22233457777654    444444445


Q ss_pred             hhccccC------CCcccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          471 EMKTFSD------PTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       471 ~~~~~~~------~~l~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +|+++.+      .+..+.+...+..-++.|+++|++|||.+.   |+|||||++|+|+.+.|.+||+|||||
T Consensus       155 VMe~~EhDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~w---ilHRDLK~SNLLm~~~G~lKiaDFGLA  224 (419)
T KOG0663|consen  155 VMEYVEHDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNW---ILHRDLKTSNLLLSHKGILKIADFGLA  224 (419)
T ss_pred             eHHHHHhhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhce---eEecccchhheeeccCCcEEecccchh
Confidence            5554432      122345677888889999999999999998   999999999999999999999999999

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.85  E-value=2.9e-21  Score=199.54  Aligned_cols=179  Identities=24%  Similarity=0.372  Sum_probs=129.4

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCc----EEEEEEecCCC-cccHHHHHHHHH------hccccceecchHHH-HHHh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQ----QIAVKRLSSAS-GQGLEEFKNEIE------TSNSNATIGANVKA-FVRE  471 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~----~vAvK~l~~~~-~~~~~~~~~e~~------~~~~~~~~~~~~~~-~~~~  471 (626)
                      .+|+..+.||+|+||.||+|++. +++    .||||.++... ....+++.+|+.      ++|++++++.+... ....
T Consensus         7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~v   86 (316)
T cd05108           7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLI   86 (316)
T ss_pred             hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCCCceee
Confidence            45888899999999999999863 333    48999987543 233455666644      47888888766542 2233


Q ss_pred             hccccCCCccc-------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhcc---
Q 006915          472 MKTFSDPTLSA-------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMM---  541 (626)
Q Consensus       472 ~~~~~~~~l~~-------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~---  541 (626)
                      ++++..+.+.+       .+++...+.++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||++..+.   
T Consensus        87 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~  163 (316)
T cd05108          87 TQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGADE  163 (316)
T ss_pred             eecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEecCCCcEEEccccccccccCCC
Confidence            44455554422       3667888999999999999999998   9999999999999999999999999983211   


Q ss_pred             ---------------ccc----------------------------cC-CCCCh-----------------HHHHHHHHH
Q 006915          542 ---------------DQK----------------------------LH-ASSKP-----------------NEILKCINV  560 (626)
Q Consensus       542 ---------------~~~----------------------------~~-~~~~~-----------------~~~~~~~~~  560 (626)
                                     .+.                            .. ...+.                 .....+..+
T Consensus       164 ~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  243 (316)
T cd05108         164 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMI  243 (316)
T ss_pred             cceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhCCCCCCCCCCCCHHHHHH
Confidence                           000                            00 00000                 112356778


Q ss_pred             HHHhcccCCCCCCCHHHHHHHhcccc
Q 006915          561 GLLCVQEDPNDRPTMSDVVIMLGSEA  586 (626)
Q Consensus       561 ~~~C~~~~p~~RPs~~~vl~~L~~~~  586 (626)
                      +..||+.+|.+||++.+++..|....
T Consensus       244 i~~cl~~~p~~Rps~~~l~~~l~~~~  269 (316)
T cd05108         244 MVKCWMIDADSRPKFRELIIEFSKMA  269 (316)
T ss_pred             HHHHccCChhhCcCHHHHHHHHHHHH
Confidence            88999999999999999999987664

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.85  E-value=1.6e-21  Score=191.27  Aligned_cols=129  Identities=24%  Similarity=0.356  Sum_probs=96.0

Q ss_pred             CccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCc--ccHHHHHHHHHhccccceecchHH-------HHHHhhccc
Q 006915          406 NFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASG--QGLEEFKNEIETSNSNATIGANVK-------AFVREMKTF  475 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~--~~~~~~~~e~~~~~~~~~~~~~~~-------~~~~~~~~~  475 (626)
                      .|...+++|.|+||.||+|.+. +++.||||++-....  ..+-++++++.|+|+++++.+...       .+..+++++
T Consensus        25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleym  104 (364)
T KOG0658|consen   25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYM  104 (364)
T ss_pred             EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhc
Confidence            3555689999999999999984 479999999875433  345567788899999999753221       222344444


Q ss_pred             cCC---------CcccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCC-CcEEEEecCcc
Q 006915          476 SDP---------TLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQE-MNPKISDFGLA  537 (626)
Q Consensus       476 ~~~---------~l~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~-~~~kl~DFGla  537 (626)
                      +..         .....++.....-+..||.+||.|||+.+   |+||||||.|+|+|.+ |.+||+|||.|
T Consensus       105 P~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~---IcHRDIKPqNlLvD~~tg~LKicDFGSA  173 (364)
T KOG0658|consen  105 PETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHG---ICHRDIKPQNLLVDPDTGVLKICDFGSA  173 (364)
T ss_pred             hHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcC---cccCCCChheEEEcCCCCeEEeccCCcc
Confidence            321         11122333334458999999999999988   9999999999999976 99999999998

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.85  E-value=1.6e-21  Score=206.94  Aligned_cols=179  Identities=26%  Similarity=0.397  Sum_probs=136.7

Q ss_pred             cccccccccCeEEEEEEEc-CCC----cEEEEEEecCCC-cccHHHHHHHH------HhccccceecchHHH-HHHhhcc
Q 006915          408 SEANKLGKGGFGPVYKAKF-PGG----QQIAVKRLSSAS-GQGLEEFKNEI------ETSNSNATIGANVKA-FVREMKT  474 (626)
Q Consensus       408 ~~~~~lG~G~fG~Vy~~~~-~~~----~~vAvK~l~~~~-~~~~~~~~~e~------~~~~~~~~~~~~~~~-~~~~~~~  474 (626)
                      +..++||.|+||+||+|.+ +.|    .+||||++.... .+...+++.|.      .++|++++++.|... +..+.++
T Consensus       699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~~qlvtq~  778 (1177)
T KOG1025|consen  699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLSTLQLVTQL  778 (1177)
T ss_pred             hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccchHHHHHHh
Confidence            3447899999999999976 443    479999987543 33455666664      458999999988763 3345566


Q ss_pred             ccCCCcccC-------CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcch---------
Q 006915          475 FSDPTLSAL-------LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLAL---------  538 (626)
Q Consensus       475 ~~~~~l~~~-------l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~---------  538 (626)
                      ++.+.|.++       |.....+.|..|||+||.|||++.   ++||||.++|||+..-..+||+|||+|+         
T Consensus       779 mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qr---lVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey  855 (1177)
T KOG1025|consen  779 MPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQR---LVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEY  855 (1177)
T ss_pred             cccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcc---hhhhhhhhhheeecCCCeEEEEecchhhccCcccccc
Confidence            677776554       445667899999999999999886   9999999999999999999999999981         


Q ss_pred             -------------------------------------------------------hccccccCCCCChHHHHHHHHHHHH
Q 006915          539 -------------------------------------------------------DMMDQKLHASSKPNEILKCINVGLL  563 (626)
Q Consensus       539 -------------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~  563 (626)
                                                                             +++....+-..++-...++..++..
T Consensus       856 ~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~geRLsqPpiCtiDVy~~mvk  935 (1177)
T KOG1025|consen  856 SAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGERLSQPPICTIDVYMVMVK  935 (1177)
T ss_pred             cccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhccccCCCCCCccHHHHHHHHH
Confidence                                                                   1111112233344556678899999


Q ss_pred             hcccCCCCCCCHHHHHHHhccccccC
Q 006915          564 CVQEDPNDRPTMSDVVIMLGSEAMNL  589 (626)
Q Consensus       564 C~~~~p~~RPs~~~vl~~L~~~~~~~  589 (626)
                      ||..|+..||+++++...+...+.++
T Consensus       936 Cwmid~~~rp~fkel~~~fs~~ardp  961 (1177)
T KOG1025|consen  936 CWMIDADSRPTFKELAEEFSRMARDP  961 (1177)
T ss_pred             HhccCcccCccHHHHHHHHHHHhcCc
Confidence            99999999999999998887765443

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.84  E-value=3.3e-21  Score=203.68  Aligned_cols=179  Identities=26%  Similarity=0.377  Sum_probs=125.0

Q ss_pred             hcCccccccccccCeEEEEEEEc------CCCcEEEEEEecCCC-cccHHHHHHHHH-------hccccceecchHH--H
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKF------PGGQQIAVKRLSSAS-GQGLEEFKNEIE-------TSNSNATIGANVK--A  467 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~------~~~~~vAvK~l~~~~-~~~~~~~~~e~~-------~~~~~~~~~~~~~--~  467 (626)
                      .++|++.+.||+|+||.||+|+.      .++..||||+++... ......+.+|++       ++|++++++.+..  .
T Consensus        37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~  116 (374)
T cd05106          37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGP  116 (374)
T ss_pred             HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCC
Confidence            34788889999999999999874      224689999997533 223345556653       4677777765432  1


Q ss_pred             HHHhhccccCCCc-------------------------------------------------------------------
Q 006915          468 FVREMKTFSDPTL-------------------------------------------------------------------  480 (626)
Q Consensus       468 ~~~~~~~~~~~~l-------------------------------------------------------------------  480 (626)
                      ++..++++.++++                                                                   
T Consensus       117 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (374)
T cd05106         117 VLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSD  196 (374)
T ss_pred             eEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccccc
Confidence            1122222222211                                                                   


Q ss_pred             ---------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhccc---------
Q 006915          481 ---------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD---------  542 (626)
Q Consensus       481 ---------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~---------  542 (626)
                               ...+++...++|+.||+.||+|||+.+   |+||||||+|||+++++.+||+|||++..+..         
T Consensus       197 ~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g---iiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~  273 (374)
T cd05106         197 SKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKN---CIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGN  273 (374)
T ss_pred             ccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---EEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccC
Confidence                     123677888999999999999999987   99999999999999999999999999732211         


Q ss_pred             ---------ccc-----------------------C-CCCC-----------------------hHHHHHHHHHHHHhcc
Q 006915          543 ---------QKL-----------------------H-ASSK-----------------------PNEILKCINVGLLCVQ  566 (626)
Q Consensus       543 ---------~~~-----------------------~-~~~~-----------------------~~~~~~~~~~~~~C~~  566 (626)
                               ++.                       . ...+                       ......+.+++..||+
T Consensus       274 ~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  353 (374)
T cd05106         274 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSRPDFAPPEIYSIMKMCWN  353 (374)
T ss_pred             CCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCccCCCCCCHHHHHHHHHHcC
Confidence                     000                       0 0000                       0012356678889999


Q ss_pred             cCCCCCCCHHHHHHHhccc
Q 006915          567 EDPNDRPTMSDVVIMLGSE  585 (626)
Q Consensus       567 ~~p~~RPs~~~vl~~L~~~  585 (626)
                      .+|.+||++.+++++|+..
T Consensus       354 ~dp~~RPs~~~l~~~l~~~  372 (374)
T cd05106         354 LEPTERPTFSQISQLIQRQ  372 (374)
T ss_pred             CChhhCcCHHHHHHHHHHH
Confidence            9999999999999999764

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.84  E-value=4.3e-21  Score=191.85  Aligned_cols=131  Identities=27%  Similarity=0.420  Sum_probs=102.9

Q ss_pred             hcCccccccccccCeEEEEEEEc-CCCcEEEEEEecC-CCcccHHHHHHHHHh------ccccceecchHH--HHHHhhc
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSS-ASGQGLEEFKNEIET------SNSNATIGANVK--AFVREMK  473 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~-~~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~  473 (626)
                      .+.|++.++||.|..++||+|+. +.++.||||++.- ........+++|+..      +|++...-..+.  .++.+|.
T Consensus        25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmp  104 (516)
T KOG0582|consen   25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMP  104 (516)
T ss_pred             ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeeh
Confidence            45788899999999999999987 5689999999983 233446788888764      666655433222  3445555


Q ss_pred             cccCCCcccC--------CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          474 TFSDPTLSAL--------LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       474 ~~~~~~l~~~--------l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++..+++.++        +++..+..|++++++||.|||.++   .||||||+.||||+.+|.+||+|||.+
T Consensus       105 fMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G---~IHRdvKAgnILi~~dG~VkLadFgvs  173 (516)
T KOG0582|consen  105 FMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNG---HIHRDVKAGNILIDSDGTVKLADFGVS  173 (516)
T ss_pred             hhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcC---ceecccccccEEEcCCCcEEEcCceee
Confidence            5555554333        567777889999999999999998   999999999999999999999999987

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.84  E-value=2e-21  Score=200.45  Aligned_cols=182  Identities=23%  Similarity=0.332  Sum_probs=140.9

Q ss_pred             hhcCccccccccccCeEEEEEEEcCC---C--cEEEEEEecCC-CcccHHHHHHHHH------hccccceecchHH-HHH
Q 006915          403 ATDNFSEANKLGKGGFGPVYKAKFPG---G--QQIAVKRLSSA-SGQGLEEFKNEIE------TSNSNATIGANVK-AFV  469 (626)
Q Consensus       403 ~~~~f~~~~~lG~G~fG~Vy~~~~~~---~--~~vAvK~l~~~-~~~~~~~~~~e~~------~~~~~~~~~~~~~-~~~  469 (626)
                      ..+.....+.||+|.||.||+|.+.+   |  -.||||..+.. .....+.|+.|..      |+++++++|.|.+ ..+
T Consensus       387 ~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~P~W  466 (974)
T KOG4257|consen  387 RRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQPMW  466 (974)
T ss_pred             ehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeecccee
Confidence            34445566899999999999998733   2  36999999863 4455777887754      5899999999887 444


Q ss_pred             HhhccccCCCcccC-------CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhcc-
Q 006915          470 REMKTFSDPTLSAL-------LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMM-  541 (626)
Q Consensus       470 ~~~~~~~~~~l~~~-------l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~-  541 (626)
                      .+|+....+.+..+       |+......++.||+.||+|||+..   +|||||.++|||+.....+||+||||++-+- 
T Consensus       467 ivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkr---fVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed  543 (974)
T KOG4257|consen  467 IVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKR---FVHRDIAARNILVSSPQCVKLADFGLSRYLED  543 (974)
T ss_pred             EEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhc---hhhhhhhhhheeecCcceeeecccchhhhccc
Confidence            55666665555443       556677789999999999999987   9999999999999999999999999982211 


Q ss_pred             --------------------------------------------------------------ccccCCCCChHHHHHHHH
Q 006915          542 --------------------------------------------------------------DQKLHASSKPNEILKCIN  559 (626)
Q Consensus       542 --------------------------------------------------------------~~~~~~~~~~~~~~~~~~  559 (626)
                                                                                    ...-....++.++..+..
T Consensus       544 ~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeRlP~P~nCPp~LYs  623 (974)
T KOG4257|consen  544 DAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGERLPCPPNCPPALYS  623 (974)
T ss_pred             cchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCCCCCCCCCCChHHHH
Confidence                                                                          111122345667778899


Q ss_pred             HHHHhcccCCCCCCCHHHHHHHhccccc
Q 006915          560 VGLLCVQEDPNDRPTMSDVVIMLGSEAM  587 (626)
Q Consensus       560 ~~~~C~~~~p~~RPs~~~vl~~L~~~~~  587 (626)
                      ++..||..+|.+||.+.++...|..+..
T Consensus       624 lmskcWayeP~kRPrftei~~~lsdv~q  651 (974)
T KOG4257|consen  624 LMSKCWAYEPSKRPRFTEIKAILSDVLQ  651 (974)
T ss_pred             HHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence            9999999999999999999888776543

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.84  E-value=7.7e-22  Score=194.00  Aligned_cols=137  Identities=28%  Similarity=0.353  Sum_probs=104.2

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCc---ccHHHHHHH------HHhccccceecchH--HHHHHh
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASG---QGLEEFKNE------IETSNSNATIGANV--KAFVRE  471 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~e------~~~~~~~~~~~~~~--~~~~~~  471 (626)
                      .++|++.+.||+|+||+||.++.. .++.+|+|++++..-   ...+...+|      ++++-++.++-...  ..++.+
T Consensus        24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV  103 (357)
T KOG0598|consen   24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV  103 (357)
T ss_pred             hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence            457899999999999999999875 489999999986421   122333333      44455665543222  245566


Q ss_pred             hccccCCCcccC------CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhcccc
Q 006915          472 MKTFSDPTLSAL------LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQ  543 (626)
Q Consensus       472 ~~~~~~~~l~~~------l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  543 (626)
                      +++..++.|...      +.+....-++.+|+.||.|||+.+   ||||||||+|||||.+|.++|+||||+++..+.
T Consensus       104 ld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~g---IiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~  178 (357)
T KOG0598|consen  104 LDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKG---IIYRDLKPENILLDEQGHIKLTDFGLCKEDLKD  178 (357)
T ss_pred             EeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHeeecCCCcEEEeccccchhcccC
Confidence            777788776544      445656678999999999999998   999999999999999999999999999755544

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.84  E-value=7.2e-21  Score=193.39  Aligned_cols=131  Identities=31%  Similarity=0.468  Sum_probs=103.7

Q ss_pred             cCccccccccccCeEEEEEEEcC-----CCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH----HHH
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-----GGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK----AFV  469 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-----~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~----~~~  469 (626)
                      ++|++.+.||+|+||.||++...     ++..||||.+........+.|.+|++.      ++++.+.+.+..    .++
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~   83 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR   83 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence            46778899999999999999752     478999999986655556667777654      667776654332    233


Q ss_pred             HhhccccCCCccc-------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcch
Q 006915          470 REMKTFSDPTLSA-------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLAL  538 (626)
Q Consensus       470 ~~~~~~~~~~l~~-------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~  538 (626)
                      ..+++..++++..       .+++..+..++.|++.||.|||+.+   |+||||||+|||+++++.+||+|||++.
T Consensus        84 lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~  156 (284)
T cd05081          84 LVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKR---YVHRDLATRNILVESENRVKIGDFGLTK  156 (284)
T ss_pred             EEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHhhEEECCCCeEEECCCcccc
Confidence            4556665555533       3678889999999999999999998   9999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>PHA02988 hypothetical protein; Provisional

Probab=99.84  E-value=7.8e-21  Score=193.10  Aligned_cols=185  Identities=16%  Similarity=0.231  Sum_probs=134.6

Q ss_pred             CCccCHHHHHHhhcCccccccccccCeEEEEEEEcCCCcEEEEEEecCCCccc---HHHHHHHHH------hccccceec
Q 006915          392 LPFIDFESILAATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQG---LEEFKNEIE------TSNSNATIG  462 (626)
Q Consensus       392 ~~~~~~~~l~~~~~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~---~~~~~~e~~------~~~~~~~~~  462 (626)
                      +..++.+++.     ......||+|++|.||+|.+ +++.||||+++......   .+.|.+|+.      ++|++++.+
T Consensus        12 ~~~i~~~~i~-----~~~~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g   85 (283)
T PHA02988         12 IKCIESDDID-----KYTSVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYG   85 (283)
T ss_pred             ceecCHHHcC-----CCCCeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEee
Confidence            4455566552     22235799999999999998 68899999997543322   355666655      488888887


Q ss_pred             chHH------HHHHhhccccCCCcccC------CCHHHHHHHHHHHHHHHHHHHhC-CCCceEecCCCCCCeEECCCCcE
Q 006915          463 ANVK------AFVREMKTFSDPTLSAL------LHWEMRFNIIIGIARGLLYLHQD-SRLRIIHRDLKTSNILLDQEMNP  529 (626)
Q Consensus       463 ~~~~------~~~~~~~~~~~~~l~~~------l~~~~~~~i~~~ia~gL~yLH~~-~~~~ivHrDlkp~NILl~~~~~~  529 (626)
                      ....      .++.+++++.++++...      +++..+++++.+++.||.|||+. +   ++||||||+|||+++++.+
T Consensus        86 ~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~---~~Hrdlkp~nill~~~~~~  162 (283)
T PHA02988         86 FIIDIVDDLPRLSLILEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTN---KPYKNLTSVSFLVTENYKL  162 (283)
T ss_pred             eEEecccCCCceEEEEEeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCC---CCCCcCChhhEEECCCCcE
Confidence            6543      33456777777766543      67888899999999999999985 5   7899999999999999999


Q ss_pred             EEEecCcchhccc-------------ccc------------------------------------------------CCC
Q 006915          530 KISDFGLALDMMD-------------QKL------------------------------------------------HAS  548 (626)
Q Consensus       530 kl~DFGla~~~~~-------------~~~------------------------------------------------~~~  548 (626)
                      ||+|||++..+.+             +..                                                ...
T Consensus       163 kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~  242 (283)
T PHA02988        163 KIICHGLEKILSSPPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLK  242 (283)
T ss_pred             EEcccchHhhhccccccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCC
Confidence            9999998732110             000                                                000


Q ss_pred             CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 006915          549 SKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSE  585 (626)
Q Consensus       549 ~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~  585 (626)
                      .+......+.+++..||+.||.+||++.+++..|+..
T Consensus       243 ~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~  279 (283)
T PHA02988        243 LPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLY  279 (283)
T ss_pred             CCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHH
Confidence            1112234567888899999999999999999998654

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.84  E-value=4.4e-21  Score=192.29  Aligned_cols=179  Identities=23%  Similarity=0.377  Sum_probs=132.4

Q ss_pred             hhcCccccccccccCeEEEEEEEcCCCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH--HHHHhhcc
Q 006915          403 ATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK--AFVREMKT  474 (626)
Q Consensus       403 ~~~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~  474 (626)
                      +..+|++.+.||+|+||.||+|...++..+|+|.+.........++..|+..      ++++++.+.+..  .++..+++
T Consensus         4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   83 (261)
T cd05148           4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITEL   83 (261)
T ss_pred             cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEee
Confidence            4456888899999999999999998899999999986655445566666554      555555443322  23344555


Q ss_pred             ccCCCcc--------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhccc----
Q 006915          475 FSDPTLS--------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD----  542 (626)
Q Consensus       475 ~~~~~l~--------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~----  542 (626)
                      ..++++.        ..+++..+..++.||+.||.|||+.+   |+|+||||+||++++++.+||+|||++..+.+    
T Consensus        84 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~  160 (261)
T cd05148          84 MEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQN---SIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYL  160 (261)
T ss_pred             cccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccCcceEEEcCCceEEEccccchhhcCCcccc
Confidence            5554443        23678889999999999999999988   99999999999999999999999998732110    


Q ss_pred             ------------c----------------------------ccCC------------------CCChHHHHHHHHHHHHh
Q 006915          543 ------------Q----------------------------KLHA------------------SSKPNEILKCINVGLLC  564 (626)
Q Consensus       543 ------------~----------------------------~~~~------------------~~~~~~~~~~~~~~~~C  564 (626)
                                  +                            ....                  ..+......+.+++.+|
T Consensus       161 ~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  240 (261)
T cd05148         161 SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYRMPCPAKCPQEIYKIMLEC  240 (261)
T ss_pred             ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCcCCCCCCCCHHHHHHHHHH
Confidence                        0                            0000                  00011224577888899


Q ss_pred             cccCCCCCCCHHHHHHHhcc
Q 006915          565 VQEDPNDRPTMSDVVIMLGS  584 (626)
Q Consensus       565 ~~~~p~~RPs~~~vl~~L~~  584 (626)
                      ++.+|.+||++.++++.|+.
T Consensus       241 l~~~p~~Rpt~~~l~~~L~~  260 (261)
T cd05148         241 WAAEPEDRPSFKALREELDN  260 (261)
T ss_pred             cCCCchhCcCHHHHHHHHhc
Confidence            99999999999999999975

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.84  E-value=9.8e-21  Score=186.13  Aligned_cols=130  Identities=26%  Similarity=0.376  Sum_probs=94.7

Q ss_pred             cCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCCc--------ccHHHHHHHHHhcc-ccceecchHH--------
Q 006915          405 DNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASG--------QGLEEFKNEIETSN-SNATIGANVK--------  466 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~--------~~~~~~~~e~~~~~-~~~~~~~~~~--------  466 (626)
                      ..|...++||+|.||+||+|+. .+|+.||+|+++-...        ..+..+.+++.+.+ ++.+......        
T Consensus        11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~   90 (323)
T KOG0594|consen   11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG   90 (323)
T ss_pred             HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence            3456668899999999999987 4689999999985432        12334566677777 7666654332        


Q ss_pred             HHHHhhcccc-------CCCcc--cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          467 AFVREMKTFS-------DPTLS--ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       467 ~~~~~~~~~~-------~~~l~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      .+..++++..       +....  ..++......++.||++||+|||+++   |+||||||+||||+++|.+||+|||+|
T Consensus        91 ~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~---IlHRDLKPQNlLi~~~G~lKlaDFGlA  167 (323)
T KOG0594|consen   91 KLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHG---ILHRDLKPQNLLISSSGVLKLADFGLA  167 (323)
T ss_pred             eEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCcceEEECCCCcEeeeccchH
Confidence            1111111111       00000  34556778899999999999999998   999999999999999999999999999

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.84  E-value=3.6e-21  Score=200.55  Aligned_cols=180  Identities=29%  Similarity=0.423  Sum_probs=125.5

Q ss_pred             hcCccccccccccCeEEEEEEEcC------CCcEEEEEEecCCCc-ccHHHHHHHHH-------hccccceecchHH---
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP------GGQQIAVKRLSSASG-QGLEEFKNEIE-------TSNSNATIGANVK---  466 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~------~~~~vAvK~l~~~~~-~~~~~~~~e~~-------~~~~~~~~~~~~~---  466 (626)
                      .++|++.+.||+|+||.||+|...      .++.||+|+++.... .....+..|+.       ++|++.+.+.+..   
T Consensus         6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~   85 (337)
T cd05054           6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGG   85 (337)
T ss_pred             HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCC
Confidence            357888899999999999999642      247899999874322 22334555544       3566666554321   


Q ss_pred             HHHHhhccccCCCc------------------------------------------------------------------
Q 006915          467 AFVREMKTFSDPTL------------------------------------------------------------------  480 (626)
Q Consensus       467 ~~~~~~~~~~~~~l------------------------------------------------------------------  480 (626)
                      .++..++++.++++                                                                  
T Consensus        86 ~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (337)
T cd05054          86 PLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDEL  165 (337)
T ss_pred             CEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHH
Confidence            11112222222221                                                                  


Q ss_pred             -ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhccc-----------------
Q 006915          481 -SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD-----------------  542 (626)
Q Consensus       481 -~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~-----------------  542 (626)
                       ...+++..+..++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||++..+..                 
T Consensus       166 ~~~~l~~~~~~~~~~qi~~aL~~lH~~~---ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~  242 (337)
T cd05054         166 YKEPLTLEDLISYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWM  242 (337)
T ss_pred             hhcCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCcccc
Confidence             125778889999999999999999987   99999999999999999999999998843210                 


Q ss_pred             -cc-----------------------cC-CCCC-----------------------hHHHHHHHHHHHHhcccCCCCCCC
Q 006915          543 -QK-----------------------LH-ASSK-----------------------PNEILKCINVGLLCVQEDPNDRPT  574 (626)
Q Consensus       543 -~~-----------------------~~-~~~~-----------------------~~~~~~~~~~~~~C~~~~p~~RPs  574 (626)
                       +.                       +. ...+                       ......+.+++..||+.+|++||+
T Consensus       243 aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs  322 (337)
T cd05054         243 APESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRAPEYATPEIYSIMLDCWHNNPEDRPT  322 (337)
T ss_pred             CcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCCCccCCHHHHHHHHHHccCChhhCcC
Confidence             00                       00 0000                       001235678889999999999999


Q ss_pred             HHHHHHHhcccc
Q 006915          575 MSDVVIMLGSEA  586 (626)
Q Consensus       575 ~~~vl~~L~~~~  586 (626)
                      +.+++++|+...
T Consensus       323 ~~ell~~l~~~~  334 (337)
T cd05054         323 FSELVEILGDLL  334 (337)
T ss_pred             HHHHHHHHHHHH
Confidence            999999998764

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.84  E-value=6.6e-21  Score=199.22  Aligned_cols=180  Identities=28%  Similarity=0.388  Sum_probs=125.6

Q ss_pred             hcCccccccccccCeEEEEEEEc------CCCcEEEEEEecCCC-cccHHHHHHHHHh-------ccccceecchHH---
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKF------PGGQQIAVKRLSSAS-GQGLEEFKNEIET-------SNSNATIGANVK---  466 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~------~~~~~vAvK~l~~~~-~~~~~~~~~e~~~-------~~~~~~~~~~~~---  466 (626)
                      .++|++.+.||+|+||.||+|..      .+++.||||.++... ......+.+|+..       ++++++.+.+..   
T Consensus         6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~   85 (343)
T cd05103           6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG   85 (343)
T ss_pred             hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence            35788899999999999999973      347889999997533 2233455566543       455555554322   


Q ss_pred             HHHHhhccccCCCc------------------------------------------------------------------
Q 006915          467 AFVREMKTFSDPTL------------------------------------------------------------------  480 (626)
Q Consensus       467 ~~~~~~~~~~~~~l------------------------------------------------------------------  480 (626)
                      .++..++++.++++                                                                  
T Consensus        86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (343)
T cd05103          86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE  165 (343)
T ss_pred             ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence            11222333332222                                                                  


Q ss_pred             -------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhcc------------
Q 006915          481 -------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMM------------  541 (626)
Q Consensus       481 -------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~------------  541 (626)
                             ...+++..+..++.||++||+|||+.+   |+||||||+|||++.++.+||+|||++..+.            
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~  242 (343)
T cd05103         166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDAR  242 (343)
T ss_pred             hhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCC
Confidence                   123677888899999999999999988   9999999999999999999999999873221            


Q ss_pred             ------cccc------------------------CCCCC------h-----------------HHHHHHHHHHHHhcccC
Q 006915          542 ------DQKL------------------------HASSK------P-----------------NEILKCINVGLLCVQED  568 (626)
Q Consensus       542 ------~~~~------------------------~~~~~------~-----------------~~~~~~~~~~~~C~~~~  568 (626)
                            .++.                        ....+      .                 .....+.+++..||+.+
T Consensus       243 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~  322 (343)
T cd05103         243 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGE  322 (343)
T ss_pred             CCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCCCCCCCCHHHHHHHHHHccCC
Confidence                  0100                        00000      0                 01125677888999999


Q ss_pred             CCCCCCHHHHHHHhcccc
Q 006915          569 PNDRPTMSDVVIMLGSEA  586 (626)
Q Consensus       569 p~~RPs~~~vl~~L~~~~  586 (626)
                      |.+||++.++++.|+.+.
T Consensus       323 p~~Rps~~eil~~l~~~~  340 (343)
T cd05103         323 PSQRPTFSELVEHLGNLL  340 (343)
T ss_pred             hhhCcCHHHHHHHHHHHH
Confidence            999999999999998764

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.84  E-value=9.8e-21  Score=190.56  Aligned_cols=179  Identities=20%  Similarity=0.281  Sum_probs=130.9

Q ss_pred             hcCccccccccccCeEEEEEEEcC----CCcEEEEEEecCCCc-ccHHHHHHHHH------hccccceecchHH--HHHH
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP----GGQQIAVKRLSSASG-QGLEEFKNEIE------TSNSNATIGANVK--AFVR  470 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~----~~~~vAvK~l~~~~~-~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~  470 (626)
                      .++|++.+.||+|+||.||+|++.    .+..||+|.++.... .....|.+|+.      +++++++.+....  .++.
T Consensus         4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l   83 (266)
T cd05064           4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMI   83 (266)
T ss_pred             hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEE
Confidence            346888899999999999999763    366899999986432 23345666654      4677777765433  3445


Q ss_pred             hhccccCCCccc-------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhc---
Q 006915          471 EMKTFSDPTLSA-------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM---  540 (626)
Q Consensus       471 ~~~~~~~~~l~~-------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~---  540 (626)
                      ++++..++++..       .+++..++.++.||+.||+|||+.+   ++||||||+|||++.++.+||+|||.+...   
T Consensus        84 v~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~---iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~  160 (266)
T cd05064          84 VTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMG---YVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSE  160 (266)
T ss_pred             EEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeeccccHhhEEEcCCCcEEECCCccccccccc
Confidence            566666655432       4678899999999999999999987   999999999999999999999999975111   


Q ss_pred             -----------------------------------------cc-cccC------------------CCCChHHHHHHHHH
Q 006915          541 -----------------------------------------MD-QKLH------------------ASSKPNEILKCINV  560 (626)
Q Consensus       541 -----------------------------------------~~-~~~~------------------~~~~~~~~~~~~~~  560 (626)
                                                               +. ...+                  ...+......+.++
T Consensus       161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  240 (266)
T cd05064         161 AIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFRLPAPRNCPNLLHQL  240 (266)
T ss_pred             chhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCCCCCCCCHHHHHH
Confidence                                                     00 0000                  00011122456678


Q ss_pred             HHHhcccCCCCCCCHHHHHHHhccc
Q 006915          561 GLLCVQEDPNDRPTMSDVVIMLGSE  585 (626)
Q Consensus       561 ~~~C~~~~p~~RPs~~~vl~~L~~~  585 (626)
                      +..||+.+|.+||++.++++.|...
T Consensus       241 i~~c~~~~p~~RP~~~~i~~~l~~~  265 (266)
T cd05064         241 MLDCWQKERGERPRFSQIHSILSKM  265 (266)
T ss_pred             HHHHcCCCchhCCCHHHHHHHHHhh
Confidence            8899999999999999999998654

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.83  E-value=5.7e-21  Score=190.94  Aligned_cols=129  Identities=30%  Similarity=0.460  Sum_probs=99.1

Q ss_pred             CccccccccccCeEEEEEEEc-CCCcEEEEEEecCC-CcccHHHHHHHHHh------ccccceecchHH--HHHHhhccc
Q 006915          406 NFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSA-SGQGLEEFKNEIET------SNSNATIGANVK--AFVREMKTF  475 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~-~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~~  475 (626)
                      .|...+.||+|.||.||+|.. ..++.||+|++... .....+++++|+..      .++...++..+.  .++..|+++
T Consensus        14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~   93 (467)
T KOG0201|consen   14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYC   93 (467)
T ss_pred             ccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHh
Confidence            466668999999999999987 45899999999843 33445566666554      334343333332  455678888


Q ss_pred             cCCCcccCC------CHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          476 SDPTLSALL------HWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       476 ~~~~l~~~l------~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      .++.....|      +.....-|+++++.||.|||.++   .+|||||+.|||+..+|.+||+|||++
T Consensus        94 ~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~---kiHrDIKaanil~s~~g~vkl~DfgVa  158 (467)
T KOG0201|consen   94 GGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEK---KIHRDIKAANILLSESGDVKLADFGVA  158 (467)
T ss_pred             cCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcc---eecccccccceeEeccCcEEEEeccee
Confidence            877766554      34444558899999999999998   999999999999999999999999998

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.83  E-value=9.3e-21  Score=195.40  Aligned_cols=130  Identities=29%  Similarity=0.435  Sum_probs=106.9

Q ss_pred             cCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH--HHHHhhccc
Q 006915          405 DNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK--AFVREMKTF  475 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~~  475 (626)
                      ..|....+||+|+.|.||.++- .+++.||||++........+-+.+|+.+      .|+|..+...+.  .++.+||++
T Consensus       273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym  352 (550)
T KOG0578|consen  273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYM  352 (550)
T ss_pred             hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeec
Confidence            3566668999999999999976 5688999999987665555656666654      666665543332  466788999


Q ss_pred             cCCCcccC-----CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          476 SDPTLSAL-----LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       476 ~~~~l~~~-----l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      .++.+.+.     +++.+...|+.+++.||+|||.++   |+|||||.+|||++.++.+||+|||++
T Consensus       353 ~ggsLTDvVt~~~~~E~qIA~Icre~l~aL~fLH~~g---IiHrDIKSDnILL~~~g~vKltDFGFc  416 (550)
T KOG0578|consen  353 EGGSLTDVVTKTRMTEGQIAAICREILQGLKFLHARG---IIHRDIKSDNILLTMDGSVKLTDFGFC  416 (550)
T ss_pred             CCCchhhhhhcccccHHHHHHHHHHHHHHHHHHHhcc---eeeeccccceeEeccCCcEEEeeeeee
Confidence            99888765     568888999999999999999998   999999999999999999999999998

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.83  E-value=1.4e-20  Score=189.90  Aligned_cols=175  Identities=26%  Similarity=0.415  Sum_probs=124.7

Q ss_pred             cccccccccCeEEEEEEEcCC-Cc--EEEEEEecCC--CcccHHHHHHHHH------hccccceecchHH--------HH
Q 006915          408 SEANKLGKGGFGPVYKAKFPG-GQ--QIAVKRLSSA--SGQGLEEFKNEIE------TSNSNATIGANVK--------AF  468 (626)
Q Consensus       408 ~~~~~lG~G~fG~Vy~~~~~~-~~--~vAvK~l~~~--~~~~~~~~~~e~~------~~~~~~~~~~~~~--------~~  468 (626)
                      .+.+.||+|+||.||+|+... +.  .||||.++..  .....+.+.+|++      +++++++++.+..        ..
T Consensus         2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   81 (272)
T cd05075           2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP   81 (272)
T ss_pred             ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence            456899999999999998754 32  6999998753  2233455665543      4677777765432        12


Q ss_pred             HHhhccccCCCcc------------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCc
Q 006915          469 VREMKTFSDPTLS------------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGL  536 (626)
Q Consensus       469 ~~~~~~~~~~~l~------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl  536 (626)
                      +..++++.++++.            ..+++.....++.|++.||+|||+.+   |+||||||+|||+++++.+||+|||+
T Consensus        82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~  158 (272)
T cd05075          82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKS---FIHRDLAARNCMLNENMNVCVADFGL  158 (272)
T ss_pred             EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhheEEcCCCCEEECCCCc
Confidence            2334444444432            23678889999999999999999987   99999999999999999999999999


Q ss_pred             chhcccc----------------------------------------------ccCC------------------CCChH
Q 006915          537 ALDMMDQ----------------------------------------------KLHA------------------SSKPN  552 (626)
Q Consensus       537 a~~~~~~----------------------------------------------~~~~------------------~~~~~  552 (626)
                      +..+...                                              ....                  ..+..
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  238 (272)
T cd05075         159 SKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRLKQPPD  238 (272)
T ss_pred             ccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCCCCC
Confidence            7322110                                              0000                  00011


Q ss_pred             HHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 006915          553 EILKCINVGLLCVQEDPNDRPTMSDVVIMLGSE  585 (626)
Q Consensus       553 ~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~  585 (626)
                      ....+.+++..||+.+|++||++.++++.|+..
T Consensus       239 ~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~  271 (272)
T cd05075         239 CLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA  271 (272)
T ss_pred             CCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            123467788899999999999999999998764

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.83  E-value=7.8e-21  Score=198.51  Aligned_cols=172  Identities=25%  Similarity=0.341  Sum_probs=135.2

Q ss_pred             ccccccccccCeEEEEEEEcC--CCc--EEEEEEecCCCcc-cHHHHHHHHHh------ccccceecchHH-HHHHhhcc
Q 006915          407 FSEANKLGKGGFGPVYKAKFP--GGQ--QIAVKRLSSASGQ-GLEEFKNEIET------SNSNATIGANVK-AFVREMKT  474 (626)
Q Consensus       407 f~~~~~lG~G~fG~Vy~~~~~--~~~--~vAvK~l~~~~~~-~~~~~~~e~~~------~~~~~~~~~~~~-~~~~~~~~  474 (626)
                      ..+.++||+|.||.|++|.+.  +|+  .||||.++..... ....|++|+.+      +++++++|..+. ...+++|.
T Consensus       112 i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~qp~mMV~EL  191 (1039)
T KOG0199|consen  112 IKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLDQPAMMVFEL  191 (1039)
T ss_pred             HHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeeccchhhHHhhh
Confidence            345679999999999999884  344  6899999865433 67889998764      788888887773 45555565


Q ss_pred             ccCCCccc--------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc---------
Q 006915          475 FSDPTLSA--------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA---------  537 (626)
Q Consensus       475 ~~~~~l~~--------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla---------  537 (626)
                      ...++|.+        .|-......++.|||.||.||.++.   +|||||.++|+||.....+||+||||.         
T Consensus       192 aplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskr---lvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~  268 (1039)
T KOG0199|consen  192 APLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKR---LVHRDLAARNLLLASPRTVKICDFGLMRALGENEDM  268 (1039)
T ss_pred             cccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhh---hhhhhhhhhhheecccceeeeecccceeccCCCCcc
Confidence            55555433        3445556679999999999999987   999999999999999999999999998         


Q ss_pred             --------------------------------------------------------hhccccccCCCCChHHHHHHHHHH
Q 006915          538 --------------------------------------------------------LDMMDQKLHASSKPNEILKCINVG  561 (626)
Q Consensus       538 --------------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~  561 (626)
                                                                              .+.+|..-.-..+..+.+++.+++
T Consensus       269 Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~erLpRPk~csedIY~im  348 (1039)
T KOG0199|consen  269 YVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAGERLPRPKYCSEDIYQIM  348 (1039)
T ss_pred             eEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhccccccCCCCCCChHHHHHHH
Confidence                                                                    223343334445566778999999


Q ss_pred             HHhcccCCCCCCCHHHHHHH
Q 006915          562 LLCVQEDPNDRPTMSDVVIM  581 (626)
Q Consensus       562 ~~C~~~~p~~RPs~~~vl~~  581 (626)
                      ..||..+|++||++..+++.
T Consensus       349 k~cWah~paDRptFsair~~  368 (1039)
T KOG0199|consen  349 KNCWAHNPADRPTFSAIRED  368 (1039)
T ss_pred             HHhccCCccccccHHHHHHh
Confidence            99999999999999999744

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.83  E-value=1.9e-20  Score=187.82  Aligned_cols=177  Identities=24%  Similarity=0.359  Sum_probs=130.4

Q ss_pred             hcCccccccccccCeEEEEEEEcCCCcEEEEEEecCCCcccHHHHHHHHH------hccccceecchHH--HHHHhhccc
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIE------TSNSNATIGANVK--AFVREMKTF  475 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~~~~  475 (626)
                      .++|++.+.||+|+||.||+|...+++.||||.++... ...+++.+|+.      +++++.+.+....  .++..+++.
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   83 (261)
T cd05068           5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELM   83 (261)
T ss_pred             hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecc
Confidence            45688889999999999999998778899999997543 23455666654      3666666554332  223344444


Q ss_pred             cCCCcc--------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhcc------
Q 006915          476 SDPTLS--------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMM------  541 (626)
Q Consensus       476 ~~~~l~--------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~------  541 (626)
                      .++++.        ..+++..+..++.|++.||.|||+.+   |+||||||+||++++++.+||+|||++..+.      
T Consensus        84 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~  160 (261)
T cd05068          84 KYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQN---YIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEA  160 (261)
T ss_pred             cCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCcceEEEcCCCCEEECCcceEEEccCCcccc
Confidence            444432        24678999999999999999999987   9999999999999999999999999872111      


Q ss_pred             -----------cccc----------------------------C------------------CCCChHHHHHHHHHHHHh
Q 006915          542 -----------DQKL----------------------------H------------------ASSKPNEILKCINVGLLC  564 (626)
Q Consensus       542 -----------~~~~----------------------------~------------------~~~~~~~~~~~~~~~~~C  564 (626)
                                 .++.                            .                  ...+......+.+++..|
T Consensus       161 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  240 (261)
T cd05068         161 REGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYRMPCPPGCPKELYDIMLDC  240 (261)
T ss_pred             cCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHH
Confidence                       1110                            0                  000111234677888899


Q ss_pred             cccCCCCCCCHHHHHHHhcc
Q 006915          565 VQEDPNDRPTMSDVVIMLGS  584 (626)
Q Consensus       565 ~~~~p~~RPs~~~vl~~L~~  584 (626)
                      ++.+|.+||++.++++.|+.
T Consensus       241 l~~~P~~Rp~~~~l~~~l~~  260 (261)
T cd05068         241 WKEDPDDRPTFETLQWKLED  260 (261)
T ss_pred             hhcCcccCCCHHHHHHHHhc
Confidence            99999999999999999874

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.83  E-value=1.1e-20  Score=200.63  Aligned_cols=180  Identities=24%  Similarity=0.322  Sum_probs=129.2

Q ss_pred             hhcCccccccccccCeEEEEEEEcC------CCcEEEEEEecCCCc-ccHHHHHHHHH-------hccccceecchHH--
Q 006915          403 ATDNFSEANKLGKGGFGPVYKAKFP------GGQQIAVKRLSSASG-QGLEEFKNEIE-------TSNSNATIGANVK--  466 (626)
Q Consensus       403 ~~~~f~~~~~lG~G~fG~Vy~~~~~------~~~~vAvK~l~~~~~-~~~~~~~~e~~-------~~~~~~~~~~~~~--  466 (626)
                      ..++|.+.+.||+|+||.||+|+..      .+..||||+++.... ...+.|.+|++       ++|++++++.+..  
T Consensus        35 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~  114 (400)
T cd05105          35 PRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSG  114 (400)
T ss_pred             cccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCC
Confidence            3567888999999999999999752      135799999975432 23456777765       5778888776543  


Q ss_pred             HHHHhhccccCCCcc-----------------------------------------------------------------
Q 006915          467 AFVREMKTFSDPTLS-----------------------------------------------------------------  481 (626)
Q Consensus       467 ~~~~~~~~~~~~~l~-----------------------------------------------------------------  481 (626)
                      .++.+++++.++++.                                                                 
T Consensus       115 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (400)
T cd05105         115 PIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEI  194 (400)
T ss_pred             ceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhh
Confidence            122233333332221                                                                 


Q ss_pred             -------------------------------------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEEC
Q 006915          482 -------------------------------------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLD  524 (626)
Q Consensus       482 -------------------------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~  524 (626)
                                                           ..+++..++.++.||+.||.|||+.+   |+||||||+|||++
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dikp~Nill~  271 (400)
T cd05105         195 KEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKN---CVHRDLAARNVLLA  271 (400)
T ss_pred             hhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHhEEEe
Confidence                                                 23667778899999999999999987   99999999999999


Q ss_pred             CCCcEEEEecCcchhccc------------------ccc-----------------------C-CC--------------
Q 006915          525 QEMNPKISDFGLALDMMD------------------QKL-----------------------H-AS--------------  548 (626)
Q Consensus       525 ~~~~~kl~DFGla~~~~~------------------~~~-----------------------~-~~--------------  548 (626)
                      +++.+||+|||++..+..                  +..                       . ..              
T Consensus       272 ~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~  351 (400)
T cd05105         272 QGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYN  351 (400)
T ss_pred             CCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHH
Confidence            999999999998732110                  000                       0 00              


Q ss_pred             ---------CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 006915          549 ---------SKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSE  585 (626)
Q Consensus       549 ---------~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~  585 (626)
                               .+......+.+++..||+.+|.+||++.+++++|+..
T Consensus       352 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l  397 (400)
T cd05105         352 KIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESL  397 (400)
T ss_pred             HHhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHH
Confidence                     0011123567888999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=99.83  E-value=8.7e-21  Score=194.00  Aligned_cols=133  Identities=27%  Similarity=0.316  Sum_probs=102.3

Q ss_pred             HhhcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCc---cc------HHHHHHHH-HhccccceecchHH--HH
Q 006915          402 AATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASG---QG------LEEFKNEI-ETSNSNATIGANVK--AF  468 (626)
Q Consensus       402 ~~~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~---~~------~~~~~~e~-~~~~~~~~~~~~~~--~~  468 (626)
                      ...++|...+.||+|+|++|++|+.. .++++|||++.+.--   ..      +++.+..+ .++.++++......  .+
T Consensus        70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sL  149 (604)
T KOG0592|consen   70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESL  149 (604)
T ss_pred             CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccce
Confidence            34567888999999999999999874 589999999875311   11      12222222 34666666543332  55


Q ss_pred             HHhhccccCCCcccC------CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          469 VREMKTFSDPTLSAL------LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       469 ~~~~~~~~~~~l~~~------l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +.++++..++++..+      |+......++.+|+.||+|||+.|   ||||||||+|||||+++.+||+|||.|
T Consensus       150 YFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~G---IIHRDlKPENILLd~dmhikITDFGsA  221 (604)
T KOG0592|consen  150 YFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNG---IIHRDLKPENILLDKDGHIKITDFGSA  221 (604)
T ss_pred             EEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeEcCCCcEEEeecccc
Confidence            667788888877554      556666779999999999999998   999999999999999999999999998

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.83  E-value=1.4e-20  Score=191.06  Aligned_cols=176  Identities=27%  Similarity=0.362  Sum_probs=121.2

Q ss_pred             CccccccccccCeEEEEEEEcC------CCcEEEEEEecCCCcc-cHHHHHHHHH------hccccceecchHH--HHHH
Q 006915          406 NFSEANKLGKGGFGPVYKAKFP------GGQQIAVKRLSSASGQ-GLEEFKNEIE------TSNSNATIGANVK--AFVR  470 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~------~~~~vAvK~l~~~~~~-~~~~~~~e~~------~~~~~~~~~~~~~--~~~~  470 (626)
                      .|.+.++||+|+||.||+|+..      .++.||||+++..... ..+.|.+|+.      +++++.+.+.+..  ....
T Consensus         6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~   85 (283)
T cd05091           6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM   85 (283)
T ss_pred             HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence            3666789999999999999863      2578999999854322 2345666654      3677766654321  1111


Q ss_pred             hhccccCC----------------------CcccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCc
Q 006915          471 EMKTFSDP----------------------TLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMN  528 (626)
Q Consensus       471 ~~~~~~~~----------------------~l~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~  528 (626)
                      .+++...+                      .....+++..++.++.|++.||+|||+.+   |+||||||+|||+++++.
T Consensus        86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g---i~H~dlkp~Nil~~~~~~  162 (283)
T cd05091          86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH---VVHKDLATRNVLVFDKLN  162 (283)
T ss_pred             EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhheEecCCCc
Confidence            11111111                      11234778888999999999999999998   999999999999999999


Q ss_pred             EEEEecCcchhcccccc----------------------------------------------C----------------
Q 006915          529 PKISDFGLALDMMDQKL----------------------------------------------H----------------  546 (626)
Q Consensus       529 ~kl~DFGla~~~~~~~~----------------------------------------------~----------------  546 (626)
                      +||+|||+++.+.+...                                              .                
T Consensus       163 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~~~  242 (283)
T cd05091         163 VKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRNR  242 (283)
T ss_pred             eEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC
Confidence            99999998632111000                                              0                


Q ss_pred             --CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 006915          547 --ASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGS  584 (626)
Q Consensus       547 --~~~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~  584 (626)
                        ...+......+..++..|++.+|.+||++.+++..|..
T Consensus       243 ~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~  282 (283)
T cd05091         243 QVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT  282 (283)
T ss_pred             CcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence              00001122346678889999999999999999999863

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.83  E-value=2.1e-20  Score=188.12  Aligned_cols=178  Identities=25%  Similarity=0.357  Sum_probs=129.3

Q ss_pred             cCccccccccccCeEEEEEEEcCC----CcEEEEEEecCCC-cccHHHHHHHHHh------ccccceecchHH--HHHHh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFPG----GQQIAVKRLSSAS-GQGLEEFKNEIET------SNSNATIGANVK--AFVRE  471 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~~----~~~vAvK~l~~~~-~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~  471 (626)
                      ++|++.+.||+|+||.||+|++..    ...||||.++... .....+|.+|+..      ++++++.+....  .++..
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv   83 (266)
T cd05033           4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII   83 (266)
T ss_pred             HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence            568888999999999999998742    4589999987543 2334556666544      666666554322  22334


Q ss_pred             hccccCCCccc-------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhcc---
Q 006915          472 MKTFSDPTLSA-------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMM---  541 (626)
Q Consensus       472 ~~~~~~~~l~~-------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~---  541 (626)
                      ++++.++++..       .+++..+++++.|++.||+|||+.+   |+|+||||+|||+++++.+||+|||++..+.   
T Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~  160 (266)
T cd05033          84 TEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSE  160 (266)
T ss_pred             EEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCCEEECccchhhcccccc
Confidence            55555554432       4678999999999999999999987   9999999999999999999999999873221   


Q ss_pred             ---------------ccccC------------------------C----------------------CCChHHHHHHHHH
Q 006915          542 ---------------DQKLH------------------------A----------------------SSKPNEILKCINV  560 (626)
Q Consensus       542 ---------------~~~~~------------------------~----------------------~~~~~~~~~~~~~  560 (626)
                                     .+...                        .                      ..+......+.++
T Consensus       161 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  240 (266)
T cd05033         161 ATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYRLPPPMDCPSALYQL  240 (266)
T ss_pred             cceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHH
Confidence                           00000                        0                      0001112467788


Q ss_pred             HHHhcccCCCCCCCHHHHHHHhccc
Q 006915          561 GLLCVQEDPNDRPTMSDVVIMLGSE  585 (626)
Q Consensus       561 ~~~C~~~~p~~RPs~~~vl~~L~~~  585 (626)
                      +..|++.+|.+||++.+++++|+..
T Consensus       241 i~~cl~~~p~~Rp~~~ei~~~l~~~  265 (266)
T cd05033         241 MLDCWQKDRNERPTFSQIVSTLDKM  265 (266)
T ss_pred             HHHHcCCCcccCcCHHHHHHHHHhh
Confidence            8999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.82  E-value=5.8e-21  Score=187.95  Aligned_cols=130  Identities=32%  Similarity=0.423  Sum_probs=105.4

Q ss_pred             cCccccccccccCeEEEEEEEc-CCCcEEEEEEecCC---CcccHHHHHHHHHh------ccccceecch--HHHHHHhh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSA---SGQGLEEFKNEIET------SNSNATIGAN--VKAFVREM  472 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~---~~~~~~~~~~e~~~------~~~~~~~~~~--~~~~~~~~  472 (626)
                      .+|++.+.||+|.||.|-+++. ..|+.||||.+++.   +.+.+..+++|+++      ++++.+....  -..++.+|
T Consensus        53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM  132 (668)
T KOG0611|consen   53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM  132 (668)
T ss_pred             hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence            4677889999999999999976 56999999999864   45666778889887      3333332211  12455678


Q ss_pred             ccccCCCcccC------CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          473 KTFSDPTLSAL------LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       473 ~~~~~~~l~~~------l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +|..++.+.++      |+..+...++.||..|+.|+|.+.   ++|||||.+|||||.++++||+||||+
T Consensus       133 EYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknr---VvHRDLKLENILLD~N~NiKIADFGLS  200 (668)
T KOG0611|consen  133 EYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNR---VVHRDLKLENILLDQNNNIKIADFGLS  200 (668)
T ss_pred             EecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhcc---ceecccchhheeecCCCCeeeeccchh
Confidence            88888888766      556777889999999999999987   999999999999999999999999998

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.82  E-value=3.2e-20  Score=186.42  Aligned_cols=177  Identities=24%  Similarity=0.351  Sum_probs=129.0

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH--HHHHhhccc
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK--AFVREMKTF  475 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~~  475 (626)
                      .+|...+.||+|+||.||+|... .++.||+|.+.... ....++.+|++.      ++++++.+.+..  .+...++++
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (263)
T cd05052           6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM   84 (263)
T ss_pred             HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence            35777789999999999999875 48899999987532 334566666553      566666654332  233445555


Q ss_pred             cCCCcc--------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhccc-----
Q 006915          476 SDPTLS--------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD-----  542 (626)
Q Consensus       476 ~~~~l~--------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~-----  542 (626)
                      .++++.        ..+++..++.++.|++.||+|||+.+   ++||||||+|||+++++.+||+|||++.....     
T Consensus        85 ~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~  161 (263)
T cd05052          85 TYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA  161 (263)
T ss_pred             CCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCcEEeCCCccccccccceeec
Confidence            555443        24678889999999999999999987   99999999999999999999999998732111     


Q ss_pred             ------------ccc----------------------------C------------------CCCChHHHHHHHHHHHHh
Q 006915          543 ------------QKL----------------------------H------------------ASSKPNEILKCINVGLLC  564 (626)
Q Consensus       543 ------------~~~----------------------------~------------------~~~~~~~~~~~~~~~~~C  564 (626)
                                  ++.                            .                  ...+......+.+++..|
T Consensus       162 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  241 (263)
T cd05052         162 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGYRMERPEGCPPKVYELMRAC  241 (263)
T ss_pred             cCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
Confidence                        000                            0                  000011123567788899


Q ss_pred             cccCCCCCCCHHHHHHHhccc
Q 006915          565 VQEDPNDRPTMSDVVIMLGSE  585 (626)
Q Consensus       565 ~~~~p~~RPs~~~vl~~L~~~  585 (626)
                      ++.+|.+||++.+++++|+.+
T Consensus       242 l~~~p~~Rp~~~~l~~~l~~~  262 (263)
T cd05052         242 WQWNPSDRPSFAEIHQAFETM  262 (263)
T ss_pred             ccCCcccCCCHHHHHHHHHhh
Confidence            999999999999999999754

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.82  E-value=2.7e-20  Score=186.70  Aligned_cols=177  Identities=24%  Similarity=0.368  Sum_probs=129.1

Q ss_pred             hcCccccccccccCeEEEEEEEcCCCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH--HHHHhhccc
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK--AFVREMKTF  475 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~~  475 (626)
                      .++|++.++||+|+||.||+|...+++.||+|.+.... ...+.+.+|+..      ++++.+.+....  .++..++++
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   83 (261)
T cd05072           5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYM   83 (261)
T ss_pred             hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecC
Confidence            35688889999999999999998888899999987533 234556666543      566666543322  233445555


Q ss_pred             cCCCcc--------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhccc-----
Q 006915          476 SDPTLS--------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD-----  542 (626)
Q Consensus       476 ~~~~l~--------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~-----  542 (626)
                      .++++.        ..+++..++.++.|++.||+|||+.+   ++||||||+||++++++.+||+|||++..+.+     
T Consensus        84 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~  160 (261)
T cd05072          84 AKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTA  160 (261)
T ss_pred             CCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEecCCCcEEECCCccceecCCCceec
Confidence            555443        23567888999999999999999987   99999999999999999999999999822110     


Q ss_pred             ----------------------------------------cccCC------------------CCChHHHHHHHHHHHHh
Q 006915          543 ----------------------------------------QKLHA------------------SSKPNEILKCINVGLLC  564 (626)
Q Consensus       543 ----------------------------------------~~~~~------------------~~~~~~~~~~~~~~~~C  564 (626)
                                                              .....                  .........+.+++..|
T Consensus       161 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  240 (261)
T cd05072         161 REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRMPRMENCPDELYDIMKTC  240 (261)
T ss_pred             cCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHH
Confidence                                                    00000                  00001124677888899


Q ss_pred             cccCCCCCCCHHHHHHHhcc
Q 006915          565 VQEDPNDRPTMSDVVIMLGS  584 (626)
Q Consensus       565 ~~~~p~~RPs~~~vl~~L~~  584 (626)
                      ++.+|++||++.+++..|+.
T Consensus       241 l~~~p~~Rp~~~~i~~~l~~  260 (261)
T cd05072         241 WKEKAEERPTFDYLQSVLDD  260 (261)
T ss_pred             ccCCcccCcCHHHHHHHHhc
Confidence            99999999999999999874

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.82  E-value=2.4e-20  Score=186.53  Aligned_cols=174  Identities=23%  Similarity=0.389  Sum_probs=126.7

Q ss_pred             cCccccccccccCeEEEEEEEcCCCcEEEEEEecCCCcccHHHHHHHHH------hccccceecchHH--HHHHhhcccc
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIE------TSNSNATIGANVK--AFVREMKTFS  476 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~~~~~  476 (626)
                      ++|++.+.||+|+||.||++++.++..+|+|.+.... ....+|.+|+.      +++++.+.+.+..  .++..+++..
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~   82 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME   82 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence            4577788999999999999999888899999987432 22345555544      4677776655433  2334455555


Q ss_pred             CCCcc-------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhccc-------
Q 006915          477 DPTLS-------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD-------  542 (626)
Q Consensus       477 ~~~l~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~-------  542 (626)
                      ++++.       ..+++..+..++.|++.||.|||+.+   |+||||||+||++++++.+||+|||++....+       
T Consensus        83 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~  159 (256)
T cd05114          83 NGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNS---FIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSS  159 (256)
T ss_pred             CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcceEEEcCCCeEEECCCCCccccCCCceeccC
Confidence            44433       23678889999999999999999988   99999999999999999999999998732210       


Q ss_pred             ----------ccc-----------------------C-CCC----------------------ChHHHHHHHHHHHHhcc
Q 006915          543 ----------QKL-----------------------H-ASS----------------------KPNEILKCINVGLLCVQ  566 (626)
Q Consensus       543 ----------~~~-----------------------~-~~~----------------------~~~~~~~~~~~~~~C~~  566 (626)
                                ++.                       . ...                      +......+.+++..||+
T Consensus       160 ~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~c~~  239 (256)
T cd05114         160 GAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYRPKLASMTVYEVMYSCWH  239 (256)
T ss_pred             CCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcc
Confidence                      000                       0 000                      00012246788889999


Q ss_pred             cCCCCCCCHHHHHHHh
Q 006915          567 EDPNDRPTMSDVVIML  582 (626)
Q Consensus       567 ~~p~~RPs~~~vl~~L  582 (626)
                      .+|.+||++.++++.|
T Consensus       240 ~~p~~Rps~~~l~~~l  255 (256)
T cd05114         240 EKPEGRPTFAELLRAI  255 (256)
T ss_pred             CCcccCcCHHHHHHhh
Confidence            9999999999999987

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.82  E-value=2.6e-20  Score=188.85  Aligned_cols=180  Identities=24%  Similarity=0.360  Sum_probs=126.4

Q ss_pred             hcCccccccccccCeEEEEEEEc-CCCc----EEEEEEecCCC-cccHHHHHHHHH------hccccceecchHHH-HHH
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKF-PGGQ----QIAVKRLSSAS-GQGLEEFKNEIE------TSNSNATIGANVKA-FVR  470 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~-~~~~----~vAvK~l~~~~-~~~~~~~~~e~~------~~~~~~~~~~~~~~-~~~  470 (626)
                      .++|+..+.||+|+||.||+|++ .+++    .||||.++... .....++.+|+.      +++++.+.+.+... ...
T Consensus         6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~l   85 (279)
T cd05109           6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTSTVQL   85 (279)
T ss_pred             hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCCCcEE
Confidence            34678889999999999999986 3444    48999987533 233445555543      46676666655431 122


Q ss_pred             hhccccCCCcc-------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhcc--
Q 006915          471 EMKTFSDPTLS-------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMM--  541 (626)
Q Consensus       471 ~~~~~~~~~l~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~--  541 (626)
                      .+++...+++.       ..+++..++.++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||++..+.  
T Consensus        86 ~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~  162 (279)
T cd05109          86 VTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVR---LVHRDLAARNVLVKSPNHVKITDFGLARLLDID  162 (279)
T ss_pred             EEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccceEEEcCCCcEEECCCCceeecccc
Confidence            33444444432       24678889999999999999999987   9999999999999999999999999872210  


Q ss_pred             ----------------ccc----------------------------cC-C-----------------CCChHHHHHHHH
Q 006915          542 ----------------DQK----------------------------LH-A-----------------SSKPNEILKCIN  559 (626)
Q Consensus       542 ----------------~~~----------------------------~~-~-----------------~~~~~~~~~~~~  559 (626)
                                      .+.                            .. .                 ..+......+..
T Consensus       163 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (279)
T cd05109         163 ETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQPPICTIDVYM  242 (279)
T ss_pred             cceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCCCccCCHHHHH
Confidence                            000                            00 0                 000111234567


Q ss_pred             HHHHhcccCCCCCCCHHHHHHHhcccc
Q 006915          560 VGLLCVQEDPNDRPTMSDVVIMLGSEA  586 (626)
Q Consensus       560 ~~~~C~~~~p~~RPs~~~vl~~L~~~~  586 (626)
                      ++..||+.||++||++.+++..|..+.
T Consensus       243 li~~~l~~dp~~Rp~~~~l~~~l~~~~  269 (279)
T cd05109         243 IMVKCWMIDSECRPRFRELVDEFSRMA  269 (279)
T ss_pred             HHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence            788999999999999999999987663

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.82  E-value=3e-20  Score=188.40  Aligned_cols=179  Identities=25%  Similarity=0.351  Sum_probs=127.0

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCc----EEEEEEecCCCc-ccHHHHHHHH------HhccccceecchHH-HHHHh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQ----QIAVKRLSSASG-QGLEEFKNEI------ETSNSNATIGANVK-AFVRE  471 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~----~vAvK~l~~~~~-~~~~~~~~e~------~~~~~~~~~~~~~~-~~~~~  471 (626)
                      ++|++.+.||+|+||.||+|.+. +++    .+|+|.+..... ....++..|+      .++|++++.+.+.. .+...
T Consensus         7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~~~~~~i   86 (279)
T cd05111           7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPGASLQLV   86 (279)
T ss_pred             hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECCCccEEE
Confidence            35677789999999999999873 344    478888764322 2234455543      35778888776543 22234


Q ss_pred             hccccCCCccc-------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhccc--
Q 006915          472 MKTFSDPTLSA-------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD--  542 (626)
Q Consensus       472 ~~~~~~~~l~~-------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~--  542 (626)
                      +++...+++..       .+++...+.++.||+.||.|||+.+   ++||||||+|||+++++.+||+|||+++.+..  
T Consensus        87 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~  163 (279)
T cd05111          87 TQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHR---MVHRNLAARNILLKSDSIVQIADFGVADLLYPDD  163 (279)
T ss_pred             EEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEEcCCccceeccCCC
Confidence            55555555542       3678889999999999999999987   99999999999999999999999998832110  


Q ss_pred             ----------------c----------------------------ccCC-CCChH-----------------HHHHHHHH
Q 006915          543 ----------------Q----------------------------KLHA-SSKPN-----------------EILKCINV  560 (626)
Q Consensus       543 ----------------~----------------------------~~~~-~~~~~-----------------~~~~~~~~  560 (626)
                                      +                            .... .....                 ....+..+
T Consensus       164 ~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  243 (279)
T cd05111         164 KKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKGERLAQPQICTIDVYMV  243 (279)
T ss_pred             cccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCCCCCCCHHHHHH
Confidence                            0                            0000 00001                 11245567


Q ss_pred             HHHhcccCCCCCCCHHHHHHHhcccc
Q 006915          561 GLLCVQEDPNDRPTMSDVVIMLGSEA  586 (626)
Q Consensus       561 ~~~C~~~~p~~RPs~~~vl~~L~~~~  586 (626)
                      +..||..+|.+||++.++++.|..+.
T Consensus       244 i~~c~~~~p~~Rps~~el~~~l~~~~  269 (279)
T cd05111         244 MVKCWMIDENVRPTFKELANEFTRMA  269 (279)
T ss_pred             HHHHcCCCcccCcCHHHHHHHHHHHH
Confidence            78899999999999999999998764

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.82  E-value=1.1e-20  Score=189.39  Aligned_cols=171  Identities=33%  Similarity=0.495  Sum_probs=122.6

Q ss_pred             ccccccccCeEEEEEEEcC-----CCcEEEEEEecCCC-cccHHHHHHHHH------hccccceecchHH--HHHHhhcc
Q 006915          409 EANKLGKGGFGPVYKAKFP-----GGQQIAVKRLSSAS-GQGLEEFKNEIE------TSNSNATIGANVK--AFVREMKT  474 (626)
Q Consensus       409 ~~~~lG~G~fG~Vy~~~~~-----~~~~vAvK~l~~~~-~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~~~  474 (626)
                      +.+.||.|.||.||+|.+.     .+..|+||.++... ....++|.+|++      ++|++++.+.+..  .+...+++
T Consensus         3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~   82 (259)
T PF07714_consen    3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY   82 (259)
T ss_dssp             EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred             EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence            4578999999999999886     25789999997533 234667777765      4888888887763  22334455


Q ss_pred             ccCCCcc--------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhc------
Q 006915          475 FSDPTLS--------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM------  540 (626)
Q Consensus       475 ~~~~~l~--------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~------  540 (626)
                      ...+++.        ..+++..++.|+.||++||.|||+.+   ++|+||+++|||+++++.+||+|||++...      
T Consensus        83 ~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~---iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~  159 (259)
T PF07714_consen   83 CPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNN---IIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKY  159 (259)
T ss_dssp             -TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTT---EEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSE
T ss_pred             ccccccccccccccccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccc
Confidence            5544442        35789999999999999999999997   999999999999999999999999987211      


Q ss_pred             ---------------------------------------cc-ccc------------------CCCCChHHHHHHHHHHH
Q 006915          541 ---------------------------------------MD-QKL------------------HASSKPNEILKCINVGL  562 (626)
Q Consensus       541 ---------------------------------------~~-~~~------------------~~~~~~~~~~~~~~~~~  562 (626)
                                                             +. ...                  ....+......+..++.
T Consensus       160 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  239 (259)
T PF07714_consen  160 KNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQRLPIPDNCPKDIYSLIQ  239 (259)
T ss_dssp             EESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEETTSBTTSBHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceeccchhHHHHHHHH
Confidence                                                   10 000                  00111122345778889


Q ss_pred             HhcccCCCCCCCHHHHHHHh
Q 006915          563 LCVQEDPNDRPTMSDVVIML  582 (626)
Q Consensus       563 ~C~~~~p~~RPs~~~vl~~L  582 (626)
                      .||+.+|.+||+|.++++.|
T Consensus       240 ~C~~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  240 QCWSHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             HHT-SSGGGS--HHHHHHHH
T ss_pred             HHcCCChhhCcCHHHHHhcC
Confidence            99999999999999999876

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.82  E-value=3e-20  Score=188.68  Aligned_cols=177  Identities=28%  Similarity=0.435  Sum_probs=125.3

Q ss_pred             cCccccccccccCeEEEEEEEcCC------CcEEEEEEecCCC-cccHHHHHHHHHh------ccccceecchHH--HHH
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFPG------GQQIAVKRLSSAS-GQGLEEFKNEIET------SNSNATIGANVK--AFV  469 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~~------~~~vAvK~l~~~~-~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~  469 (626)
                      ++|++.+.||+|+||.||+|....      ...||+|.+.... .....+|.+|+..      ++++.+++....  .+.
T Consensus         5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T cd05048           5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC   84 (283)
T ss_pred             HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence            357778999999999999998643      2579999987533 2334556666553      666666654332  112


Q ss_pred             HhhccccCCCcc----------------------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCC
Q 006915          470 REMKTFSDPTLS----------------------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEM  527 (626)
Q Consensus       470 ~~~~~~~~~~l~----------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~  527 (626)
                      ..+++..++++.                      ..+++...+.++.|++.||.|||+.+   ++|+||||+|||+++++
T Consensus        85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nil~~~~~  161 (283)
T cd05048          85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH---FVHRDLAARNCLVGEGL  161 (283)
T ss_pred             EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccccceEEEcCCC
Confidence            223333333321                      34678888999999999999999998   99999999999999999


Q ss_pred             cEEEEecCcchhcc------------------cccc----------------------------C---------------
Q 006915          528 NPKISDFGLALDMM------------------DQKL----------------------------H---------------  546 (626)
Q Consensus       528 ~~kl~DFGla~~~~------------------~~~~----------------------------~---------------  546 (626)
                      .+||+|||++....                  .++.                            .               
T Consensus       162 ~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i~~  241 (283)
T cd05048         162 TVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRS  241 (283)
T ss_pred             cEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc
Confidence            99999999873210                  0000                            0               


Q ss_pred             ---CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 006915          547 ---ASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGS  584 (626)
Q Consensus       547 ---~~~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~  584 (626)
                         ...+......+.+++..||+.+|.+||++.++++.|+.
T Consensus       242 ~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05048         242 RQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS  282 (283)
T ss_pred             CCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence               00001122466788899999999999999999999975

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.82  E-value=3.3e-20  Score=190.39  Aligned_cols=129  Identities=30%  Similarity=0.415  Sum_probs=103.2

Q ss_pred             CccccccccccCeEEEEEEEc-CCCcEEEEEEecCCCcccH---------HHHHHHHHhccccceecchHH--HHHHhhc
Q 006915          406 NFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQGL---------EEFKNEIETSNSNATIGANVK--AFVREMK  473 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~~~~---------~~~~~e~~~~~~~~~~~~~~~--~~~~~~~  473 (626)
                      -|...+.||.|+||.||.++. .+.+.||||++.-...+..         ..|++.+.++|.+...|+.+.  .-+.+|+
T Consensus        27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME  106 (948)
T KOG0577|consen   27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME  106 (948)
T ss_pred             HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence            366779999999999999987 5688999999985433332         235555667888888777665  3456677


Q ss_pred             cccCCC------cccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          474 TFSDPT------LSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       474 ~~~~~~------l~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      |+.+..      ..+.|....+..|..+.+.||+|||+.+   .||||||+.||||++.|.+||+|||.|
T Consensus       107 YClGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~---~IHRDiKAGNILLse~g~VKLaDFGSA  173 (948)
T KOG0577|consen  107 YCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHN---RIHRDIKAGNILLSEPGLVKLADFGSA  173 (948)
T ss_pred             HHhccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhh---HHhhhccccceEecCCCeeeeccccch
Confidence            776532      2345667778889999999999999998   999999999999999999999999988

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.82  E-value=2.7e-20  Score=195.48  Aligned_cols=129  Identities=26%  Similarity=0.403  Sum_probs=99.6

Q ss_pred             CccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC-cccHHHHHHHHHh------ccccceecchHH--HHHHhhccc
Q 006915          406 NFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS-GQGLEEFKNEIET------SNSNATIGANVK--AFVREMKTF  475 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~~  475 (626)
                      +|+..+.||+|+||.||+|+.. +++.||||.+.... ......+.+|++.      .|++++.+....  .++..++++
T Consensus        75 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~  154 (353)
T PLN00034         75 ELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFM  154 (353)
T ss_pred             HHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecC
Confidence            4556689999999999999874 58999999996432 2234556667654      566666554332  233456666


Q ss_pred             cCCCccc--CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          476 SDPTLSA--LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       476 ~~~~l~~--~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      .++++..  .+.+.....++.||+.||.|||+.+   |+||||||+|||+++++.+||+|||++
T Consensus       155 ~~~~L~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DfG~~  215 (353)
T PLN00034        155 DGGSLEGTHIADEQFLADVARQILSGIAYLHRRH---IVHRDIKPSNLLINSAKNVKIADFGVS  215 (353)
T ss_pred             CCCcccccccCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEcccccc
Confidence            6666644  3456777889999999999999998   999999999999999999999999987

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.82  E-value=3e-20  Score=189.46  Aligned_cols=178  Identities=28%  Similarity=0.377  Sum_probs=124.8

Q ss_pred             CccccccccccCeEEEEEEEcC------CCcEEEEEEecCCCc-ccHHHHHHHHH------hccccceecchHH--HHHH
Q 006915          406 NFSEANKLGKGGFGPVYKAKFP------GGQQIAVKRLSSASG-QGLEEFKNEIE------TSNSNATIGANVK--AFVR  470 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~------~~~~vAvK~l~~~~~-~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~  470 (626)
                      +|.+.+.||+|+||.||+|+..      ....+|+|.+..... .....+.+|+.      +++++++.+.+..  ..+.
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   80 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL   80 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence            4667789999999999999752      235799998875432 23445666654      3677776654322  1122


Q ss_pred             hhccccCCCcc------------------------------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCC
Q 006915          471 EMKTFSDPTLS------------------------------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSN  520 (626)
Q Consensus       471 ~~~~~~~~~l~------------------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~N  520 (626)
                      .+++..++++.                              ..+++...+.++.|++.||+|||+.+   |+||||||+|
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---ivH~dikp~n  157 (290)
T cd05045          81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK---LVHRDLAARN  157 (290)
T ss_pred             EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC---eehhhhhhhe
Confidence            23333322222                              23678888999999999999999987   9999999999


Q ss_pred             eEECCCCcEEEEecCcchhccc----------------------------------------------cccCC-CC----
Q 006915          521 ILLDQEMNPKISDFGLALDMMD----------------------------------------------QKLHA-SS----  549 (626)
Q Consensus       521 ILl~~~~~~kl~DFGla~~~~~----------------------------------------------~~~~~-~~----  549 (626)
                      ||+++++.+||+|||++..+..                                              ..... ..    
T Consensus       158 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~  237 (290)
T cd05045         158 VLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPER  237 (290)
T ss_pred             EEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence            9999999999999999732110                                              00000 00    


Q ss_pred             -------------ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 006915          550 -------------KPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEA  586 (626)
Q Consensus       550 -------------~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~  586 (626)
                                   +......+.+++..|++.+|.+||++.+++..|+.+.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~  287 (290)
T cd05045         238 LFNLLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMM  287 (290)
T ss_pred             HHHHHhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHH
Confidence                         0011235678888999999999999999999998764

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.82  E-value=1.9e-20  Score=189.51  Aligned_cols=178  Identities=22%  Similarity=0.370  Sum_probs=126.6

Q ss_pred             hhcCccccccccccCeEEEEEEEcC------CCcEEEEEEecCCC-cccHHHHHHHHH------hccccceecchHH--H
Q 006915          403 ATDNFSEANKLGKGGFGPVYKAKFP------GGQQIAVKRLSSAS-GQGLEEFKNEIE------TSNSNATIGANVK--A  467 (626)
Q Consensus       403 ~~~~f~~~~~lG~G~fG~Vy~~~~~------~~~~vAvK~l~~~~-~~~~~~~~~e~~------~~~~~~~~~~~~~--~  467 (626)
                      .+++|++.+.||+|+||.||+|...      .+..||||++.... .....+|.+|+.      +++++++.+.+..  .
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~   83 (277)
T cd05062           4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP   83 (277)
T ss_pred             cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence            4677999999999999999999753      25689999986432 223345666654      4667766654432  2


Q ss_pred             HHHhhccccCCCccc----------------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEE
Q 006915          468 FVREMKTFSDPTLSA----------------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKI  531 (626)
Q Consensus       468 ~~~~~~~~~~~~l~~----------------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl  531 (626)
                      .+..++++.++++..                .+++..++.++.|++.||.|||+.+   ++|+||||+|||+++++.+||
T Consensus        84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---~vH~dlkp~Nil~~~~~~~~l  160 (277)
T cd05062          84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKI  160 (277)
T ss_pred             eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCcchheEEEcCCCCEEE
Confidence            233445554444322                2457788899999999999999987   999999999999999999999


Q ss_pred             EecCcchhcc------------------cccc----------------------------C-CC----------------
Q 006915          532 SDFGLALDMM------------------DQKL----------------------------H-AS----------------  548 (626)
Q Consensus       532 ~DFGla~~~~------------------~~~~----------------------------~-~~----------------  548 (626)
                      +|||++..+.                  .+..                            . ..                
T Consensus       161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~  240 (277)
T cd05062         161 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGLL  240 (277)
T ss_pred             CCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcC
Confidence            9999873210                  0000                            0 00                


Q ss_pred             -CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 006915          549 -SKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLG  583 (626)
Q Consensus       549 -~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~  583 (626)
                       .+......+.+++..|++.+|.+||++.+++.+|+
T Consensus       241 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~  276 (277)
T cd05062         241 DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK  276 (277)
T ss_pred             CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence             00111234677888999999999999999999886

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.82  E-value=4.1e-20  Score=184.95  Aligned_cols=175  Identities=24%  Similarity=0.365  Sum_probs=127.7

Q ss_pred             cCccccccccccCeEEEEEEEcCCCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH--HHHHhhcccc
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK--AFVREMKTFS  476 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~~~  476 (626)
                      ++|.+.+.||+|+||.||+|+..++..+|||.++... ....+|.+|+..      ++++++.+.+..  .++..+++..
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   82 (256)
T cd05113           4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS   82 (256)
T ss_pred             HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence            3577788999999999999998777789999987533 334566666553      667777665432  2234445444


Q ss_pred             CCCcc-------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhccccc-----
Q 006915          477 DPTLS-------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQK-----  544 (626)
Q Consensus       477 ~~~l~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~-----  544 (626)
                      ++++.       ..+.+..++.++.||+.||.|||+.+   ++|+||||+|||+++++.+||+|||++..+.++.     
T Consensus        83 ~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~  159 (256)
T cd05113          83 NGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQ---FIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSV  159 (256)
T ss_pred             CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCCEEECCCccceecCCCceeecC
Confidence            44322       24788899999999999999999987   9999999999999999999999999873211100     


Q ss_pred             ----------------------------------------cCC-CCCh-----------------HHHHHHHHHHHHhcc
Q 006915          545 ----------------------------------------LHA-SSKP-----------------NEILKCINVGLLCVQ  566 (626)
Q Consensus       545 ----------------------------------------~~~-~~~~-----------------~~~~~~~~~~~~C~~  566 (626)
                                                              ... ....                 .....+.+++..||+
T Consensus       160 ~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  239 (256)
T cd05113         160 GSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRLYRPHLASEKVYAIMYSCWH  239 (256)
T ss_pred             CCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcC
Confidence                                                    000 0000                 112356788889999


Q ss_pred             cCCCCCCCHHHHHHHhc
Q 006915          567 EDPNDRPTMSDVVIMLG  583 (626)
Q Consensus       567 ~~p~~RPs~~~vl~~L~  583 (626)
                      .+|.+||++.+++..|+
T Consensus       240 ~~p~~Rp~~~~ll~~~~  256 (256)
T cd05113         240 EKAEERPTFQQLLSSIE  256 (256)
T ss_pred             CCcccCCCHHHHHHhhC
Confidence            99999999999998874

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.82  E-value=2.7e-20  Score=190.37  Aligned_cols=131  Identities=27%  Similarity=0.405  Sum_probs=98.4

Q ss_pred             cCccccccccccCeEEEEEEEcCC---------------CcEEEEEEecCC-CcccHHHHHHHHHh------ccccceec
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFPG---------------GQQIAVKRLSSA-SGQGLEEFKNEIET------SNSNATIG  462 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~~---------------~~~vAvK~l~~~-~~~~~~~~~~e~~~------~~~~~~~~  462 (626)
                      ++|.+.+.||+|+||.||+++...               ...||||.++.. .......|.+|++.      ++++.+.+
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~   84 (295)
T cd05097           5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG   84 (295)
T ss_pred             HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence            468888999999999999997632               235899998754 22334556677554      66666665


Q ss_pred             chHH--HHHHhhccccCCCccc------------------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeE
Q 006915          463 ANVK--AFVREMKTFSDPTLSA------------------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNIL  522 (626)
Q Consensus       463 ~~~~--~~~~~~~~~~~~~l~~------------------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIL  522 (626)
                      .+..  ..+..++++.++++..                  .+.+..++.++.|++.||+|||+.+   ++||||||+|||
T Consensus        85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Nil  161 (295)
T cd05097          85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN---FVHRDLATRNCL  161 (295)
T ss_pred             EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC---eeccccChhhEE
Confidence            4432  2334455555444322                  2567888999999999999999998   999999999999


Q ss_pred             ECCCCcEEEEecCcch
Q 006915          523 LDQEMNPKISDFGLAL  538 (626)
Q Consensus       523 l~~~~~~kl~DFGla~  538 (626)
                      +++++.+||+|||++.
T Consensus       162 l~~~~~~kl~dfg~~~  177 (295)
T cd05097         162 VGNHYTIKIADFGMSR  177 (295)
T ss_pred             EcCCCcEEeccccccc
Confidence            9999999999999873

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.82  E-value=3e-21  Score=197.26  Aligned_cols=177  Identities=25%  Similarity=0.388  Sum_probs=138.6

Q ss_pred             cccccccCeEEEEEEEcCCCcEEEEEEecCCCcccHHHHHHHHHhccccceecchHH--HHHHhhccccCCCcccCC---
Q 006915          410 ANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVK--AFVREMKTFSDPTLSALL---  484 (626)
Q Consensus       410 ~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~e~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~l---  484 (626)
                      ++.||.|+-|.||+|+++ ++.||||+++...+... .-++.++|+|++.+.|.|..  -|..+|++...+.|...|   
T Consensus       129 LeWlGSGaQGAVF~Grl~-netVAVKKV~elkETdI-KHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~VLka~  206 (904)
T KOG4721|consen  129 LEWLGSGAQGAVFLGRLH-NETVAVKKVRELKETDI-KHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYEVLKAG  206 (904)
T ss_pred             hhhhccCcccceeeeecc-CceehhHHHhhhhhhhH-HHHHhccCcceeeEeeeecCCceeEEeeeccccccHHHHHhcc
Confidence            478999999999999994 68999999986443333 33466788999999999887  566788888888776654   


Q ss_pred             ---CHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhcccc------------------
Q 006915          485 ---HWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQ------------------  543 (626)
Q Consensus       485 ---~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~------------------  543 (626)
                         .......+..+||.||.|||.+.   |||||||.-||||..+..+||+|||.++++-+.                  
T Consensus       207 ~~itp~llv~Wsk~IA~GM~YLH~hK---IIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkMSFaGTVaWMAPEvI  283 (904)
T KOG4721|consen  207 RPITPSLLVDWSKGIAGGMNYLHLHK---IIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKMSFAGTVAWMAPEVI  283 (904)
T ss_pred             CccCHHHHHHHHHHhhhhhHHHHHhh---HhhhccCCCceEeeccceEEeccccchHhhhhhhhhhhhhhhHhhhCHHHh
Confidence               35666789999999999999987   999999999999999999999999988222111                  


Q ss_pred             -------------------------------------------ccCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 006915          544 -------------------------------------------KLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVI  580 (626)
Q Consensus       544 -------------------------------------------~~~~~~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~  580 (626)
                                                                 .+....+..++.-+.-++..||+-.|..||++++++.
T Consensus       284 rnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~  363 (904)
T KOG4721|consen  284 RNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILL  363 (904)
T ss_pred             hcCCcccccceehhHHHHHHHHhcCCCccccchheeEEeccCCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHH
Confidence                                                       1112223344455666777899999999999999999


Q ss_pred             HhccccccCCC
Q 006915          581 MLGSEAMNLAT  591 (626)
Q Consensus       581 ~L~~~~~~~~~  591 (626)
                      .|.....++..
T Consensus       364 HldIa~pell~  374 (904)
T KOG4721|consen  364 HLDIASPELLS  374 (904)
T ss_pred             HHhhcCHHHhc
Confidence            99876555544

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.82  E-value=1.5e-20  Score=191.95  Aligned_cols=181  Identities=27%  Similarity=0.387  Sum_probs=128.6

Q ss_pred             HhhcCccccccccccCeEEEEEEEcCC------CcEEEEEEecCCC-cccHHHHHHHHH-------hccccceecchHH-
Q 006915          402 AATDNFSEANKLGKGGFGPVYKAKFPG------GQQIAVKRLSSAS-GQGLEEFKNEIE-------TSNSNATIGANVK-  466 (626)
Q Consensus       402 ~~~~~f~~~~~lG~G~fG~Vy~~~~~~------~~~vAvK~l~~~~-~~~~~~~~~e~~-------~~~~~~~~~~~~~-  466 (626)
                      ...++|+..+.||+|+||.||++....      ...+|+|.+.... .....++.+|++       +++++++.+.+.. 
T Consensus         9 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~   88 (293)
T cd05053           9 LPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQE   88 (293)
T ss_pred             cCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCC
Confidence            345678888999999999999998632      3689999987532 233345666653       4666666654332 


Q ss_pred             -HHHHhhccccCCCc----------------------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEE
Q 006915          467 -AFVREMKTFSDPTL----------------------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILL  523 (626)
Q Consensus       467 -~~~~~~~~~~~~~l----------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl  523 (626)
                       .++..++++.++++                      ...+++..++.++.|++.||.|||+.+   |+||||||+|||+
T Consensus        89 ~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~Nil~  165 (293)
T cd05053          89 GPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKK---CIHRDLAARNVLV  165 (293)
T ss_pred             CCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCC---ccccccceeeEEE
Confidence             22233333333322                      234678889999999999999999987   9999999999999


Q ss_pred             CCCCcEEEEecCcchhccc------------------cccC------------------------C--------------
Q 006915          524 DQEMNPKISDFGLALDMMD------------------QKLH------------------------A--------------  547 (626)
Q Consensus       524 ~~~~~~kl~DFGla~~~~~------------------~~~~------------------------~--------------  547 (626)
                      ++++.+||+|||++..+..                  ++..                        .              
T Consensus       166 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~  245 (293)
T cd05053         166 TEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFK  245 (293)
T ss_pred             cCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHH
Confidence            9999999999998732111                  0000                        0              


Q ss_pred             --------CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 006915          548 --------SSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSE  585 (626)
Q Consensus       548 --------~~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~  585 (626)
                              ..+......+.+++..|++.+|.+|||+.++++.|+.+
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~  291 (293)
T cd05053         246 LLKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRM  291 (293)
T ss_pred             HHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHh
Confidence                    00011124577888999999999999999999999765

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.82  E-value=4.1e-21  Score=177.55  Aligned_cols=132  Identities=30%  Similarity=0.360  Sum_probs=103.2

Q ss_pred             hhcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHHHHh------ccccceecchHH--HHHH
Q 006915          403 ATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNEIET------SNSNATIGANVK--AFVR  470 (626)
Q Consensus       403 ~~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~  470 (626)
                      +.++|++.+.||+|-||.||.|+.+ ++..||+|++.+..   .+-..++++|+++      +|+.++.++.+.  ..+.
T Consensus        20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyL   99 (281)
T KOG0580|consen   20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYL   99 (281)
T ss_pred             chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEE
Confidence            3467888999999999999999885 57899999997532   2334567777664      777777766554  2334


Q ss_pred             hhccccCCCcccC--------CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          471 EMKTFSDPTLSAL--------LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       471 ~~~~~~~~~l~~~--------l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      .+|+...+.+...        ++......++.|+|.||.|+|..+   ||||||||+|+|++.++..||+|||.+
T Consensus       100 ilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~---VIhRdiKpenlLlg~~~~lkiAdfGws  171 (281)
T KOG0580|consen  100 ILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKR---VIHRDIKPENLLLGSAGELKIADFGWS  171 (281)
T ss_pred             EEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCC---cccCCCCHHHhccCCCCCeeccCCCce
Confidence            4566655554332        445566779999999999999987   999999999999999999999999988

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.82  E-value=3e-20  Score=188.80  Aligned_cols=177  Identities=26%  Similarity=0.390  Sum_probs=125.0

Q ss_pred             cCccccccccccCeEEEEEEEc-----CCCcEEEEEEecCCC-cccHHHHHHHHHh------ccccceecchHH--HHHH
Q 006915          405 DNFSEANKLGKGGFGPVYKAKF-----PGGQQIAVKRLSSAS-GQGLEEFKNEIET------SNSNATIGANVK--AFVR  470 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~-----~~~~~vAvK~l~~~~-~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~  470 (626)
                      +.|++.+.||+|+||.||+|..     ..+..||+|.+.... ......+.+|++.      +|++++.+....  ..+.
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l   84 (283)
T cd05090           5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM   84 (283)
T ss_pred             hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence            4577779999999999999974     246789999997433 2333556666543      666666654322  2223


Q ss_pred             hhccccCCCcc-----------------------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCC
Q 006915          471 EMKTFSDPTLS-----------------------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEM  527 (626)
Q Consensus       471 ~~~~~~~~~l~-----------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~  527 (626)
                      .++++..+++.                       ..+++.+.+.++.|++.||.|||+.+   |+||||||+|||+++++
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~nili~~~~  161 (283)
T cd05090          85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF---FVHKDLAARNILIGEQL  161 (283)
T ss_pred             EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC---eehhccccceEEEcCCC
Confidence            34444333322                       24678888999999999999999987   99999999999999999


Q ss_pred             cEEEEecCcchhccc------------------cccC------------------------CC-----CCh---------
Q 006915          528 NPKISDFGLALDMMD------------------QKLH------------------------AS-----SKP---------  551 (626)
Q Consensus       528 ~~kl~DFGla~~~~~------------------~~~~------------------------~~-----~~~---------  551 (626)
                      .+||+|||++..+..                  ++..                        ..     ...         
T Consensus       162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~~~  241 (283)
T cd05090         162 HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRK  241 (283)
T ss_pred             cEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc
Confidence            999999998843211                  0000                        00     000         


Q ss_pred             --------HHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 006915          552 --------NEILKCINVGLLCVQEDPNDRPTMSDVVIMLGS  584 (626)
Q Consensus       552 --------~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~  584 (626)
                              .....+.+++..|++.+|.+||++.++.+.|..
T Consensus       242 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05090         242 RQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS  282 (283)
T ss_pred             CCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence                    012346677889999999999999999998864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.82  E-value=4.2e-20  Score=186.40  Aligned_cols=176  Identities=24%  Similarity=0.389  Sum_probs=125.6

Q ss_pred             ccccccccccCeEEEEEEEcCC----CcEEEEEEecCCC--cccHHHHHHHHH------hccccceecchHH--------
Q 006915          407 FSEANKLGKGGFGPVYKAKFPG----GQQIAVKRLSSAS--GQGLEEFKNEIE------TSNSNATIGANVK--------  466 (626)
Q Consensus       407 f~~~~~lG~G~fG~Vy~~~~~~----~~~vAvK~l~~~~--~~~~~~~~~e~~------~~~~~~~~~~~~~--------  466 (626)
                      |.+.+.||+|+||.||+|.+..    +..||||+++...  ......+.+|++      +++++++.+.+..        
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   80 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP   80 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence            4567899999999999998742    4689999987432  233455666654      4677776654332        


Q ss_pred             HHHHhhccccCCCc------------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEec
Q 006915          467 AFVREMKTFSDPTL------------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDF  534 (626)
Q Consensus       467 ~~~~~~~~~~~~~l------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DF  534 (626)
                      ..+..++++..+++            ...+++.....++.|++.||.|||+.+   |+||||||+||++++++.+||+||
T Consensus        81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~df  157 (273)
T cd05035          81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRN---FIHRDLAARNCMLREDMTVCVADF  157 (273)
T ss_pred             ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchheEEECCCCeEEECCc
Confidence            12223344444433            234678888999999999999999987   999999999999999999999999


Q ss_pred             Ccchhccccc------------------cC------------------------CC----------------------CC
Q 006915          535 GLALDMMDQK------------------LH------------------------AS----------------------SK  550 (626)
Q Consensus       535 Gla~~~~~~~------------------~~------------------------~~----------------------~~  550 (626)
                      |+++.+....                  ..                        ..                      .+
T Consensus       158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  237 (273)
T cd05035         158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRLKQP  237 (273)
T ss_pred             cceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC
Confidence            9984322110                  00                        00                      00


Q ss_pred             hHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 006915          551 PNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSE  585 (626)
Q Consensus       551 ~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~  585 (626)
                      ......+.+++..|++.+|.+||++.+++..|..+
T Consensus       238 ~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~  272 (273)
T cd05035         238 EDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI  272 (273)
T ss_pred             cCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            11123567888899999999999999999998754

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.82  E-value=3e-20  Score=197.32  Aligned_cols=100  Identities=26%  Similarity=0.359  Sum_probs=77.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhccc------------------cc
Q 006915          483 LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD------------------QK  544 (626)
Q Consensus       483 ~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~------------------~~  544 (626)
                      .+++...+.++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||++..+..                  +.
T Consensus       235 ~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE  311 (401)
T cd05107         235 ALSYMDLVGFSYQVANGMEFLASKN---CVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPE  311 (401)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCC---cCcccCCcceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChH
Confidence            3567788899999999999999887   99999999999999999999999999732210                  00


Q ss_pred             ----------------------------cCC-CCCh------------------HHHHHHHHHHHHhcccCCCCCCCHHH
Q 006915          545 ----------------------------LHA-SSKP------------------NEILKCINVGLLCVQEDPNDRPTMSD  577 (626)
Q Consensus       545 ----------------------------~~~-~~~~------------------~~~~~~~~~~~~C~~~~p~~RPs~~~  577 (626)
                                                  ... ..+.                  .....+.+++..||+.+|.+||++++
T Consensus       312 ~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~e  391 (401)
T cd05107         312 SIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQ  391 (401)
T ss_pred             HhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHH
Confidence                                        000 0000                  01234567888999999999999999


Q ss_pred             HHHHhccc
Q 006915          578 VVIMLGSE  585 (626)
Q Consensus       578 vl~~L~~~  585 (626)
                      ++..|+..
T Consensus       392 ll~~L~~~  399 (401)
T cd05107         392 LVHLVGDL  399 (401)
T ss_pred             HHHHHHHH
Confidence            99999875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.82  E-value=4.2e-20  Score=188.23  Aligned_cols=179  Identities=27%  Similarity=0.386  Sum_probs=130.6

Q ss_pred             cCccccccccccCeEEEEEEEc------CCCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH--HHHH
Q 006915          405 DNFSEANKLGKGGFGPVYKAKF------PGGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK--AFVR  470 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~------~~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~  470 (626)
                      ++|.+.+.||+|+||.||++..      .++..+|+|.+..........+.+|++.      ++++.+.+.+..  .++.
T Consensus         5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (288)
T cd05093           5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM   84 (288)
T ss_pred             HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence            4688889999999999999974      2356799999986555555667777553      666666654432  2334


Q ss_pred             hhccccCCCcc-------------------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEE
Q 006915          471 EMKTFSDPTLS-------------------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKI  531 (626)
Q Consensus       471 ~~~~~~~~~l~-------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl  531 (626)
                      .++++.++++.                   ..+++..++.++.|++.||+|||+.+   ++||||||+|||+++++.+||
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~---i~H~dlkp~Nili~~~~~~kl  161 (288)
T cd05093          85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVKI  161 (288)
T ss_pred             EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccCCcEEe
Confidence            44444444432                   23788999999999999999999988   999999999999999999999


Q ss_pred             EecCcchhcc------------------ccc----------------------------cCC------------------
Q 006915          532 SDFGLALDMM------------------DQK----------------------------LHA------------------  547 (626)
Q Consensus       532 ~DFGla~~~~------------------~~~----------------------------~~~------------------  547 (626)
                      +|||++..+.                  .++                            ...                  
T Consensus       162 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~~~~  241 (288)
T cd05093         162 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVL  241 (288)
T ss_pred             ccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCcC
Confidence            9999873110                  000                            000                  


Q ss_pred             CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 006915          548 SSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEA  586 (626)
Q Consensus       548 ~~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~  586 (626)
                      ..+......+.+++..|++.+|.+||++.+++..|+.+.
T Consensus       242 ~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~  280 (288)
T cd05093         242 QRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLA  280 (288)
T ss_pred             CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHH
Confidence            000011235778888999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.82  E-value=3.7e-20  Score=188.96  Aligned_cols=179  Identities=24%  Similarity=0.353  Sum_probs=130.5

Q ss_pred             cCccccccccccCeEEEEEEEcC------CCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH--HHHH
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP------GGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK--AFVR  470 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~------~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~  470 (626)
                      .+|.+.+.||+|+||.||+|+..      ++..+|+|.+........+.+.+|++.      ++++.+.+.+..  .++.
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (291)
T cd05094           5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM   84 (291)
T ss_pred             HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence            45777899999999999999752      356799999886655555667777654      666666554432  2233


Q ss_pred             hhccccCCCcc----------------------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCc
Q 006915          471 EMKTFSDPTLS----------------------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMN  528 (626)
Q Consensus       471 ~~~~~~~~~l~----------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~  528 (626)
                      +++++.++++.                      ..+++..++.++.||+.||+|||+++   |+||||||+|||++.++.
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Nil~~~~~~  161 (291)
T cd05094          85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH---FVHRDLATRNCLVGANLL  161 (291)
T ss_pred             EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccCCc
Confidence            34444444332                      23678899999999999999999998   999999999999999999


Q ss_pred             EEEEecCcchhc---------------------------------------------cc-cccCC---------------
Q 006915          529 PKISDFGLALDM---------------------------------------------MD-QKLHA---------------  547 (626)
Q Consensus       529 ~kl~DFGla~~~---------------------------------------------~~-~~~~~---------------  547 (626)
                      +||+|||++...                                             +. .....               
T Consensus       162 ~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~  241 (291)
T cd05094         162 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQG  241 (291)
T ss_pred             EEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhCC
Confidence            999999987211                                             10 00000               


Q ss_pred             ---CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 006915          548 ---SSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEA  586 (626)
Q Consensus       548 ---~~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~  586 (626)
                         .........+.+++..||+.+|.+||++.+++++|..+.
T Consensus       242 ~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~  283 (291)
T cd05094         242 RVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALG  283 (291)
T ss_pred             CCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHH
Confidence               000112345778888999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.82  E-value=6.6e-20  Score=184.09  Aligned_cols=178  Identities=24%  Similarity=0.389  Sum_probs=130.2

Q ss_pred             hcCccccccccccCeEEEEEEEcCCCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH-HHHHhhcccc
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK-AFVREMKTFS  476 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~-~~~~~~~~~~  476 (626)
                      .++|.+.++||+|+||.||+|+..+...||||.++... ...++|.+|++.      ++++++.+.... .++..+++..
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~~   83 (262)
T cd05071           5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMS   83 (262)
T ss_pred             hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEECCCCcEEEEEcCC
Confidence            35688899999999999999998777789999997532 234566777654      566665543322 2234445555


Q ss_pred             CCCcc--------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhccc------
Q 006915          477 DPTLS--------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD------  542 (626)
Q Consensus       477 ~~~l~--------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~------  542 (626)
                      ++++.        ..+++..+..++.|++.||+|||+.+   |+||||||+||++++++.+||+|||++..+..      
T Consensus        84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~  160 (262)
T cd05071          84 KGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR  160 (262)
T ss_pred             CCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcccEEEcCCCcEEeccCCceeeccccccccc
Confidence            54443        23678889999999999999999987   99999999999999999999999998721100      


Q ss_pred             -----------c----------------------------ccC------------------CCCChHHHHHHHHHHHHhc
Q 006915          543 -----------Q----------------------------KLH------------------ASSKPNEILKCINVGLLCV  565 (626)
Q Consensus       543 -----------~----------------------------~~~------------------~~~~~~~~~~~~~~~~~C~  565 (626)
                                 +                            ...                  ..........+.+++..|+
T Consensus       161 ~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  240 (262)
T cd05071         161 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCW  240 (262)
T ss_pred             cCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCCCCCccccCHHHHHHHHHHc
Confidence                       0                            000                  0001112345778899999


Q ss_pred             ccCCCCCCCHHHHHHHhccc
Q 006915          566 QEDPNDRPTMSDVVIMLGSE  585 (626)
Q Consensus       566 ~~~p~~RPs~~~vl~~L~~~  585 (626)
                      +.+|.+||++.++++.|+..
T Consensus       241 ~~~p~~Rp~~~~~~~~l~~~  260 (262)
T cd05071         241 RKEPEERPTFEYLQAFLEDY  260 (262)
T ss_pred             cCCcccCCCHHHHHHHHHHh
Confidence            99999999999999998753

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.82  E-value=3.5e-20  Score=202.25  Aligned_cols=134  Identities=22%  Similarity=0.239  Sum_probs=100.9

Q ss_pred             HHhhcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCC--CcccHHHHHHHHHh------ccccceecchHH-----
Q 006915          401 LAATDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSA--SGQGLEEFKNEIET------SNSNATIGANVK-----  466 (626)
Q Consensus       401 ~~~~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~--~~~~~~~~~~e~~~------~~~~~~~~~~~~-----  466 (626)
                      ....++|.+.+.||+|+||.||+++. .+++.||||.+...  .......+.+|+..      .+++........     
T Consensus        28 ~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~  107 (496)
T PTZ00283         28 KEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRN  107 (496)
T ss_pred             cccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccC
Confidence            34457899999999999999999986 46899999998743  23334556666654      333433221110     


Q ss_pred             -----HHHHhhccccCCCccc----------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEE
Q 006915          467 -----AFVREMKTFSDPTLSA----------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKI  531 (626)
Q Consensus       467 -----~~~~~~~~~~~~~l~~----------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl  531 (626)
                           .+..++++..++++..          .+++.....++.|++.||.|||+.+   |+||||||+|||++.++.+||
T Consensus       108 ~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~---IiHrDLKP~NILl~~~~~vkL  184 (496)
T PTZ00283        108 PENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKH---MIHRDIKSANILLCSNGLVKL  184 (496)
T ss_pred             cccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEeCCCCEEE
Confidence                 1224456666666533          3567778889999999999999987   999999999999999999999


Q ss_pred             EecCcc
Q 006915          532 SDFGLA  537 (626)
Q Consensus       532 ~DFGla  537 (626)
                      +|||++
T Consensus       185 ~DFGls  190 (496)
T PTZ00283        185 GDFGFS  190 (496)
T ss_pred             EecccC
Confidence            999987

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.81  E-value=5.8e-20  Score=183.67  Aligned_cols=175  Identities=24%  Similarity=0.415  Sum_probs=128.3

Q ss_pred             cCccccccccccCeEEEEEEEcCCCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH--HHHHhhcccc
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK--AFVREMKTFS  476 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~~~  476 (626)
                      ++|++.+.||+|+||.||+|... ++.||||.+..... ..+++.+|+..      ++++++.+....  ..+..++++.
T Consensus         6 ~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~   83 (256)
T cd05039           6 KELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMA   83 (256)
T ss_pred             hhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecC
Confidence            46777899999999999999874 78999999986543 45566666543      566666654432  2223444454


Q ss_pred             CCCccc--------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhccc------
Q 006915          477 DPTLSA--------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD------  542 (626)
Q Consensus       477 ~~~l~~--------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~------  542 (626)
                      ++++..        .+.+..+..++.|++.||.|||+.+   ++|+||||+||+++.++.+||+|||++.....      
T Consensus        84 ~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~~~  160 (256)
T cd05039          84 KGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKN---FVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGK  160 (256)
T ss_pred             CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccchhcccceEEEeCCCCEEEcccccccccccccccCC
Confidence            444332        4788999999999999999999998   99999999999999999999999998732110      


Q ss_pred             -----------------------------------cccC-CCC-----------------ChHHHHHHHHHHHHhcccCC
Q 006915          543 -----------------------------------QKLH-ASS-----------------KPNEILKCINVGLLCVQEDP  569 (626)
Q Consensus       543 -----------------------------------~~~~-~~~-----------------~~~~~~~~~~~~~~C~~~~p  569 (626)
                                                         .... ...                 +......+.+++..|++.+|
T Consensus       161 ~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  240 (256)
T cd05039         161 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYRMEAPEGCPPEVYKVMKDCWELDP  240 (256)
T ss_pred             CcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCCccCCCHHHHHHHHHHhccCh
Confidence                                               0000 000                 01112456778889999999


Q ss_pred             CCCCCHHHHHHHhcc
Q 006915          570 NDRPTMSDVVIMLGS  584 (626)
Q Consensus       570 ~~RPs~~~vl~~L~~  584 (626)
                      .+||++.+++.+|..
T Consensus       241 ~~Rp~~~~l~~~l~~  255 (256)
T cd05039         241 AKRPTFKQLREQLAL  255 (256)
T ss_pred             hhCcCHHHHHHHHhc
Confidence            999999999999864

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.81  E-value=5.9e-20  Score=184.12  Aligned_cols=176  Identities=25%  Similarity=0.391  Sum_probs=128.0

Q ss_pred             cCccccccccccCeEEEEEEEcCCCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH-HHHHhhccccC
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK-AFVREMKTFSD  477 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~-~~~~~~~~~~~  477 (626)
                      ++|++.++||+|+||.||+|...++..||+|.+..... ..+.|.+|+..      ++++.+.+.... ..+..+++..+
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~~~   84 (260)
T cd05070           6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVSEEPIYIVTEYMSK   84 (260)
T ss_pred             HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEECCCCcEEEEEecCC
Confidence            46778899999999999999988888999999975432 34556666653      555555543322 22344455544


Q ss_pred             CCcc--------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhcc--------
Q 006915          478 PTLS--------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMM--------  541 (626)
Q Consensus       478 ~~l~--------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~--------  541 (626)
                      +++.        ..+++..+..++.+++.||.|||+.+   |+||||||+||++++++.+||+|||++..+.        
T Consensus        85 ~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~  161 (260)
T cd05070          85 GSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN---YIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQ  161 (260)
T ss_pred             CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEEeCCceEEeCCceeeeeccCccccccc
Confidence            4432        23678889999999999999999998   9999999999999999999999999872110        


Q ss_pred             ---------cccc-----------------------C-CC----------------------CChHHHHHHHHHHHHhcc
Q 006915          542 ---------DQKL-----------------------H-AS----------------------SKPNEILKCINVGLLCVQ  566 (626)
Q Consensus       542 ---------~~~~-----------------------~-~~----------------------~~~~~~~~~~~~~~~C~~  566 (626)
                               .++.                       . ..                      .+......+.+++..|++
T Consensus       162 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  241 (260)
T cd05070         162 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPISLHELMLQCWK  241 (260)
T ss_pred             CCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcc
Confidence                     0000                       0 00                      001122456788889999


Q ss_pred             cCCCCCCCHHHHHHHhcc
Q 006915          567 EDPNDRPTMSDVVIMLGS  584 (626)
Q Consensus       567 ~~p~~RPs~~~vl~~L~~  584 (626)
                      .+|.+|||+.+++..|+.
T Consensus       242 ~~p~~Rpt~~~l~~~l~~  259 (260)
T cd05070         242 KDPEERPTFEYLQSFLED  259 (260)
T ss_pred             cCcccCcCHHHHHHHHhc
Confidence            999999999999998864

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.81  E-value=6.2e-20  Score=186.43  Aligned_cols=128  Identities=33%  Similarity=0.455  Sum_probs=99.0

Q ss_pred             ccccccccccCeEEEEEEEc-----CCCcEEEEEEecCCCc-ccHHHHHHHHH------hccccceecchHH----HHHH
Q 006915          407 FSEANKLGKGGFGPVYKAKF-----PGGQQIAVKRLSSASG-QGLEEFKNEIE------TSNSNATIGANVK----AFVR  470 (626)
Q Consensus       407 f~~~~~lG~G~fG~Vy~~~~-----~~~~~vAvK~l~~~~~-~~~~~~~~e~~------~~~~~~~~~~~~~----~~~~  470 (626)
                      |...+.||+|+||.||++..     .++..||+|.++.... .....|.+|++      +++++++.+.+..    .++.
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (283)
T cd05080           6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL   85 (283)
T ss_pred             ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence            37778999999999988753     3578999999975432 33455666654      3667777665432    2334


Q ss_pred             hhccccCCCccc-----CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          471 EMKTFSDPTLSA-----LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       471 ~~~~~~~~~l~~-----~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      .+++...+++..     .+++.++..++.|++.||.|||+.+   |+||||||+|||+++++.+||+|||++
T Consensus        86 v~e~~~~~~l~~~~~~~~l~~~~~~~i~~~l~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~  154 (283)
T cd05080          86 IMEYVPLGSLRDYLPKHKLNLAQLLLFAQQICEGMAYLHSQH---YIHRDLAARNVLLDNDRLVKIGDFGLA  154 (283)
T ss_pred             EecCCCCCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccChheEEEcCCCcEEEeecccc
Confidence            556665555533     4789999999999999999999997   999999999999999999999999987

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.81  E-value=5.7e-20  Score=188.16  Aligned_cols=179  Identities=23%  Similarity=0.379  Sum_probs=125.8

Q ss_pred             cCccccccccccCeEEEEEEEcCC-C--cEEEEEEecCC-CcccHHHHHHHHHh-------ccccceecchHH--HHHHh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFPG-G--QQIAVKRLSSA-SGQGLEEFKNEIET-------SNSNATIGANVK--AFVRE  471 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~~-~--~~vAvK~l~~~-~~~~~~~~~~e~~~-------~~~~~~~~~~~~--~~~~~  471 (626)
                      ++|++.+.||+|+||.||+|...+ +  ..+|+|.++.. .....+.|.+|++.       ++++++.+.+..  .++..
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv   81 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA   81 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence            467888999999999999998753 3  35799988742 22334556666543       556665544322  12233


Q ss_pred             hccccCCCcc----------------------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcE
Q 006915          472 MKTFSDPTLS----------------------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNP  529 (626)
Q Consensus       472 ~~~~~~~~l~----------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~  529 (626)
                      +++...+++.                      ..+++..++.++.|++.||+|||+.+   |+||||||+|||+++++.+
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~  158 (297)
T cd05089          82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ---FIHRDLAARNVLVGENLAS  158 (297)
T ss_pred             EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCcCCcceEEECCCCeE
Confidence            3443333331                      24678889999999999999999987   9999999999999999999


Q ss_pred             EEEecCcchh------------------------------------------ccc-cccCC------------------C
Q 006915          530 KISDFGLALD------------------------------------------MMD-QKLHA------------------S  548 (626)
Q Consensus       530 kl~DFGla~~------------------------------------------~~~-~~~~~------------------~  548 (626)
                      ||+|||++..                                          ++. .....                  .
T Consensus       159 kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~~~~~  238 (297)
T cd05089         159 KIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRME  238 (297)
T ss_pred             EECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCC
Confidence            9999998721                                          000 00000                  0


Q ss_pred             CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 006915          549 SKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEA  586 (626)
Q Consensus       549 ~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~  586 (626)
                      .+......+.+++..|++.+|.+||++.++++.|....
T Consensus       239 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~  276 (297)
T cd05089         239 KPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRML  276 (297)
T ss_pred             CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            00012235678888999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.81  E-value=8.5e-20  Score=185.26  Aligned_cols=130  Identities=32%  Similarity=0.456  Sum_probs=99.8

Q ss_pred             CccccccccccCeEEEEEEEcC-----CCcEEEEEEecCCCcc-cHHHHHHHHHh------ccccceecchHH----HHH
Q 006915          406 NFSEANKLGKGGFGPVYKAKFP-----GGQQIAVKRLSSASGQ-GLEEFKNEIET------SNSNATIGANVK----AFV  469 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~-----~~~~vAvK~l~~~~~~-~~~~~~~e~~~------~~~~~~~~~~~~----~~~  469 (626)
                      .|...+.||+|+||.||++++.     .++.||||.+...... ....|.+|++.      ++++.+.+.+..    .+.
T Consensus         5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~   84 (284)
T cd05038           5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLR   84 (284)
T ss_pred             hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceE
Confidence            4666789999999999999863     3679999999865432 45667777654      556665554332    233


Q ss_pred             HhhccccCCCccc-------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcch
Q 006915          470 REMKTFSDPTLSA-------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLAL  538 (626)
Q Consensus       470 ~~~~~~~~~~l~~-------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~  538 (626)
                      ..+++..++++..       .+++..++.++.|++.||+|||+.+   ++|+||||+||+++.++.+||+|||++.
T Consensus        85 lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~  157 (284)
T cd05038          85 LIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQR---YIHRDLAARNILVESEDLVKISDFGLAK  157 (284)
T ss_pred             EEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEccccccc
Confidence            4455555555432       3678888999999999999999987   9999999999999999999999999883

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.81  E-value=6.9e-20  Score=182.69  Aligned_cols=170  Identities=24%  Similarity=0.320  Sum_probs=123.2

Q ss_pred             ccccccCeEEEEEEEcC-CCcEEEEEEecCCC-cccHHHHHHHHH------hccccceecchHH--HHHHhhccccCCCc
Q 006915          411 NKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS-GQGLEEFKNEIE------TSNSNATIGANVK--AFVREMKTFSDPTL  480 (626)
Q Consensus       411 ~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~~~~~~~~l  480 (626)
                      +.||+|+||.||+|+.. +++.||+|.+.... ......+.+|++      +++++++.+.+..  .++.+++++.++++
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF   80 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence            47999999999999884 68999999886432 233455666654      4677776665433  23344555555543


Q ss_pred             c-------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhcc------------
Q 006915          481 S-------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMM------------  541 (626)
Q Consensus       481 ~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~------------  541 (626)
                      .       ..+++..++.++.|++.||+|||+.+   |+||||||+|||++.++.+||+|||++..+.            
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~  157 (252)
T cd05084          81 LTFLRTEGPRLKVKELIQMVENAAAGMEYLESKH---CIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQ  157 (252)
T ss_pred             HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEEcCCCcEEECccccCcccccccccccCCCCC
Confidence            3       23678889999999999999999987   9999999999999999999999999873211            


Q ss_pred             ------ccccC------------------------C----------------------CCChHHHHHHHHHHHHhcccCC
Q 006915          542 ------DQKLH------------------------A----------------------SSKPNEILKCINVGLLCVQEDP  569 (626)
Q Consensus       542 ------~~~~~------------------------~----------------------~~~~~~~~~~~~~~~~C~~~~p  569 (626)
                            .++..                        .                      ..+......+.+++..|++.+|
T Consensus       158 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  237 (252)
T cd05084         158 IPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVRLPCPELCPDAVYRLMERCWEYDP  237 (252)
T ss_pred             CceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCCcccCCHHHHHHHHHHcCCCh
Confidence                  01100                        0                      0000112356678889999999


Q ss_pred             CCCCCHHHHHHHhc
Q 006915          570 NDRPTMSDVVIMLG  583 (626)
Q Consensus       570 ~~RPs~~~vl~~L~  583 (626)
                      .+||++.+++++|+
T Consensus       238 ~~Rps~~~~~~~l~  251 (252)
T cd05084         238 GQRPSFSTVHQELQ  251 (252)
T ss_pred             hhCcCHHHHHHHHh
Confidence            99999999999985

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.81  E-value=9.3e-20  Score=182.41  Aligned_cols=171  Identities=23%  Similarity=0.313  Sum_probs=125.0

Q ss_pred             cccccCeEEEEEEEc---CCCcEEEEEEecCCC--cccHHHHHHHHH------hccccceecchHH-HHHHhhccccCCC
Q 006915          412 KLGKGGFGPVYKAKF---PGGQQIAVKRLSSAS--GQGLEEFKNEIE------TSNSNATIGANVK-AFVREMKTFSDPT  479 (626)
Q Consensus       412 ~lG~G~fG~Vy~~~~---~~~~~vAvK~l~~~~--~~~~~~~~~e~~------~~~~~~~~~~~~~-~~~~~~~~~~~~~  479 (626)
                      +||+|+||.||+|.+   .++..+|||+++...  ....+++.+|+.      +++++.+.+.+.. .+...+++...+.
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~~~   81 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEAESWMLVMELAELGP   81 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCcEEEEecCCCCc
Confidence            699999999999975   347899999987433  223456666654      4777777765432 2234455555555


Q ss_pred             ccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhccc-----------
Q 006915          480 LSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD-----------  542 (626)
Q Consensus       480 l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~-----------  542 (626)
                      +..      .+++..+..++.|++.||+|||+.+   |+||||||.|||++.++.+||+|||++..+..           
T Consensus        82 L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~  158 (257)
T cd05116          82 LNKFLQKNKHVTEKNITELVHQVSMGMKYLEETN---FVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHG  158 (257)
T ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCC
Confidence            532      4678888999999999999999988   99999999999999999999999998722110           


Q ss_pred             --------c----------------------------ccC------------------CCCChHHHHHHHHHHHHhcccC
Q 006915          543 --------Q----------------------------KLH------------------ASSKPNEILKCINVGLLCVQED  568 (626)
Q Consensus       543 --------~----------------------------~~~------------------~~~~~~~~~~~~~~~~~C~~~~  568 (626)
                              +                            ...                  ...+......+.+++..||+.+
T Consensus       159 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~~~~~  238 (257)
T cd05116         159 KWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGERMECPQRCPPEMYDLMKLCWTYG  238 (257)
T ss_pred             CCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHhccC
Confidence                    0                            000                  0001112346778888999999


Q ss_pred             CCCCCCHHHHHHHhccc
Q 006915          569 PNDRPTMSDVVIMLGSE  585 (626)
Q Consensus       569 p~~RPs~~~vl~~L~~~  585 (626)
                      |.+||++.+|++.|...
T Consensus       239 p~~Rp~~~~i~~~l~~~  255 (257)
T cd05116         239 VDERPGFAVVELRLRNY  255 (257)
T ss_pred             chhCcCHHHHHHHHhcc
Confidence            99999999999999764

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.81  E-value=5.7e-20  Score=183.83  Aligned_cols=174  Identities=24%  Similarity=0.378  Sum_probs=126.2

Q ss_pred             CccccccccccCeEEEEEEEcCCCcEEEEEEecCCCcccHHHHHHHHH------hccccceecchHH--HHHHhhccccC
Q 006915          406 NFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIE------TSNSNATIGANVK--AFVREMKTFSD  477 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~~~~~~  477 (626)
                      +|++.+.||+|+||.||+|+..++..+|||.+.... ....+|.+|++      +++++.+.+....  .++..+++..+
T Consensus         5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~   83 (256)
T cd05059           5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMAN   83 (256)
T ss_pred             HcchhhhhccCCCceEEEeEecCCccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCC
Confidence            467778999999999999998777889999987532 23345555544      3666665544322  22344555555


Q ss_pred             CCccc-------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhcccc-------
Q 006915          478 PTLSA-------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQ-------  543 (626)
Q Consensus       478 ~~l~~-------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~-------  543 (626)
                      +++.+       .+++..++.++.|++.||+|||+.+   |+||||||+||++++++.+||+|||++....+.       
T Consensus        84 ~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~  160 (256)
T cd05059          84 GCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNG---FIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQG  160 (256)
T ss_pred             CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHhhEEECCCCcEEECCcccceecccccccccCC
Confidence            54432       4678889999999999999999998   999999999999999999999999987322110       


Q ss_pred             ----------c----------------------------cCC------------------CCChHHHHHHHHHHHHhccc
Q 006915          544 ----------K----------------------------LHA------------------SSKPNEILKCINVGLLCVQE  567 (626)
Q Consensus       544 ----------~----------------------------~~~------------------~~~~~~~~~~~~~~~~C~~~  567 (626)
                                .                            ...                  ..+......+.+++..|++.
T Consensus       161 ~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  240 (256)
T cd05059         161 TKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYRLYRPKLAPTEVYTIMYSCWHE  240 (256)
T ss_pred             CCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhcC
Confidence                      0                            000                  00011134577888899999


Q ss_pred             CCCCCCCHHHHHHHhc
Q 006915          568 DPNDRPTMSDVVIMLG  583 (626)
Q Consensus       568 ~p~~RPs~~~vl~~L~  583 (626)
                      +|++||++.+++..|.
T Consensus       241 ~p~~Rpt~~~~l~~l~  256 (256)
T cd05059         241 KPEDRPAFKKLLSQLT  256 (256)
T ss_pred             ChhhCcCHHHHHHHhC
Confidence            9999999999999873

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.81  E-value=5.5e-20  Score=187.41  Aligned_cols=181  Identities=24%  Similarity=0.412  Sum_probs=127.9

Q ss_pred             hhcCccccccccccCeEEEEEEEcC------CCcEEEEEEecCCCc-ccHHHHHHHHH------hccccceecchHH--H
Q 006915          403 ATDNFSEANKLGKGGFGPVYKAKFP------GGQQIAVKRLSSASG-QGLEEFKNEIE------TSNSNATIGANVK--A  467 (626)
Q Consensus       403 ~~~~f~~~~~lG~G~fG~Vy~~~~~------~~~~vAvK~l~~~~~-~~~~~~~~e~~------~~~~~~~~~~~~~--~  467 (626)
                      ..++|++.+.||+|+||.||+|...      .+..||||.++.... .....+.+|+.      +++++++.+....  .
T Consensus         4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   83 (288)
T cd05061           4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP   83 (288)
T ss_pred             cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence            4567889999999999999999753      245899999874332 22334555544      3666666654332  2


Q ss_pred             HHHhhccccCCCcccC----------------CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEE
Q 006915          468 FVREMKTFSDPTLSAL----------------LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKI  531 (626)
Q Consensus       468 ~~~~~~~~~~~~l~~~----------------l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl  531 (626)
                      .+..++++.++++...                +.+.....++.|++.||.|||+++   |+||||||+|||+++++.+||
T Consensus        84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dikp~nili~~~~~~~L  160 (288)
T cd05061          84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKI  160 (288)
T ss_pred             cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCCChheEEEcCCCcEEE
Confidence            3344555555544433                345667889999999999999987   999999999999999999999


Q ss_pred             EecCcchhccc------------------cccC------------------------CC---------------------
Q 006915          532 SDFGLALDMMD------------------QKLH------------------------AS---------------------  548 (626)
Q Consensus       532 ~DFGla~~~~~------------------~~~~------------------------~~---------------------  548 (626)
                      +|||+++.+..                  +...                        ..                     
T Consensus       161 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~  240 (288)
T cd05061         161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL  240 (288)
T ss_pred             CcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC
Confidence            99998732110                  0000                        00                     


Q ss_pred             -CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 006915          549 -SKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEA  586 (626)
Q Consensus       549 -~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~  586 (626)
                       .+......+.+++..|++.+|.+||++.++++.|....
T Consensus       241 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~  279 (288)
T cd05061         241 DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL  279 (288)
T ss_pred             CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence             00011245778888999999999999999999987753

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.81  E-value=9.5e-20  Score=182.61  Aligned_cols=177  Identities=25%  Similarity=0.384  Sum_probs=129.1

Q ss_pred             hcCccccccccccCeEEEEEEEcCCCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH-HHHHhhcccc
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK-AFVREMKTFS  476 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~-~~~~~~~~~~  476 (626)
                      .+.|.+.++||+|+||.||+|...+++.||+|.+.... .....|.+|+..      ++++.+.+.... .++..+++..
T Consensus         5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~   83 (260)
T cd05067           5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVVTQEPIYIITEYME   83 (260)
T ss_pred             hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEEccCCcEEEEEcCC
Confidence            35688889999999999999998889999999997543 234566666543      555555543222 2233445554


Q ss_pred             CCCccc--------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhcc-------
Q 006915          477 DPTLSA--------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMM-------  541 (626)
Q Consensus       477 ~~~l~~--------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~-------  541 (626)
                      ++++..        .+++.+++.++.|++.||+|||+.+   ++||||||+||++++++.++|+|||++....       
T Consensus        84 ~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~  160 (260)
T cd05067          84 NGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKN---YIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAR  160 (260)
T ss_pred             CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHHhEEEcCCCCEEEccCcceeecCCCCcccc
Confidence            444432        3678889999999999999999987   9999999999999999999999999872211       


Q ss_pred             -------------------------------------c-cccCC-CCC-----------------hHHHHHHHHHHHHhc
Q 006915          542 -------------------------------------D-QKLHA-SSK-----------------PNEILKCINVGLLCV  565 (626)
Q Consensus       542 -------------------------------------~-~~~~~-~~~-----------------~~~~~~~~~~~~~C~  565 (626)
                                                           . ..... ...                 ......+.+++..|+
T Consensus       161 ~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  240 (260)
T cd05067         161 EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRMPRPDNCPEELYELMRLCW  240 (260)
T ss_pred             cCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHc
Confidence                                                 0 00000 000                 001235788888999


Q ss_pred             ccCCCCCCCHHHHHHHhcc
Q 006915          566 QEDPNDRPTMSDVVIMLGS  584 (626)
Q Consensus       566 ~~~p~~RPs~~~vl~~L~~  584 (626)
                      +.+|++||++++++..|+.
T Consensus       241 ~~~p~~Rp~~~~l~~~l~~  259 (260)
T cd05067         241 KEKPEERPTFEYLRSVLED  259 (260)
T ss_pred             cCChhhCCCHHHHHHHhhc
Confidence            9999999999999998864

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.81  E-value=9.3e-20  Score=185.27  Aligned_cols=129  Identities=30%  Similarity=0.508  Sum_probs=100.2

Q ss_pred             CccccccccccCeEEEEEEEc-----CCCcEEEEEEecCCC-cccHHHHHHHHHh------ccccceecchHH----HHH
Q 006915          406 NFSEANKLGKGGFGPVYKAKF-----PGGQQIAVKRLSSAS-GQGLEEFKNEIET------SNSNATIGANVK----AFV  469 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~-----~~~~~vAvK~l~~~~-~~~~~~~~~e~~~------~~~~~~~~~~~~----~~~  469 (626)
                      .|++.+.||+|+||.||++++     .++..||+|.++... ......+.+|++.      ++++.+.+.+..    .+.
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   84 (284)
T cd05079           5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK   84 (284)
T ss_pred             hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence            467789999999999999974     347899999987543 2334556666554      666666554332    233


Q ss_pred             HhhccccCCCccc-------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          470 REMKTFSDPTLSA-------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       470 ~~~~~~~~~~l~~-------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ..+++..++++..       .+++..++.++.|++.||+|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus        85 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~g---i~H~dlkp~Nil~~~~~~~~l~dfg~~  156 (284)
T cd05079          85 LIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLT  156 (284)
T ss_pred             EEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccchheEEEcCCCCEEECCCccc
Confidence            4566666666533       3678899999999999999999998   999999999999999999999999987

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.81  E-value=6.9e-20  Score=186.39  Aligned_cols=128  Identities=30%  Similarity=0.353  Sum_probs=97.4

Q ss_pred             ccccccccccCeEEEEEEEc-CCCcEEEEEEecCCC---cccHHHHHHHHHh------ccccceecchHH--HHHHhhcc
Q 006915          407 FSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSAS---GQGLEEFKNEIET------SNSNATIGANVK--AFVREMKT  474 (626)
Q Consensus       407 f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~---~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~  474 (626)
                      |+..+.||+|+||.||++.. .+++.||||.+....   ......+.+|+..      ++++.+......  .++..+++
T Consensus         2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~   81 (285)
T cd05631           2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI   81 (285)
T ss_pred             ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence            67778999999999999987 468999999987432   1223445666554      445555443322  23344555


Q ss_pred             ccCCCcc--------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          475 FSDPTLS--------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       475 ~~~~~l~--------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +.++++.        ..+++..+..++.|++.||+|||+.+   |+||||||+|||+++++.+||+|||++
T Consensus        82 ~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nill~~~~~~kl~Dfg~~  149 (285)
T cd05631          82 MNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRER---IVYRDLKPENILLDDRGHIRISDLGLA  149 (285)
T ss_pred             cCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeCCCc
Confidence            5555542        24678888999999999999999998   999999999999999999999999997

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.81  E-value=1.5e-19  Score=181.82  Aligned_cols=178  Identities=19%  Similarity=0.317  Sum_probs=126.6

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCC---CcccHHHHHHHHHh------ccccceecchHH--HHHHhh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSA---SGQGLEEFKNEIET------SNSNATIGANVK--AFVREM  472 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~---~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~  472 (626)
                      ++|++.+.||+|+||.||+|+.. +++.||||.+...   .......+.+|++.      ++++.+.+....  .+...+
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL   81 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence            57888999999999999999874 6899999987642   22233455666543      566665543322  222334


Q ss_pred             ccccCCCcc----------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhc--
Q 006915          473 KTFSDPTLS----------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM--  540 (626)
Q Consensus       473 ~~~~~~~l~----------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~--  540 (626)
                      ++..++++.          ..++......++.|++.||.|||+.+   ++|+||||+|||++.++.++|+|||++..+  
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~  158 (267)
T cd08228          82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS  158 (267)
T ss_pred             EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence            444444432          23667888999999999999999987   999999999999999999999999976110  


Q ss_pred             -----------------------------------------cccccC---------------------CCCChHHHHHHH
Q 006915          541 -----------------------------------------MDQKLH---------------------ASSKPNEILKCI  558 (626)
Q Consensus       541 -----------------------------------------~~~~~~---------------------~~~~~~~~~~~~  558 (626)
                                                               ......                     ..........+.
T Consensus       159 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (267)
T cd08228         159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYSEKLR  238 (267)
T ss_pred             hhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCCCCCChhhcCHHHH
Confidence                                                     000000                     000011224577


Q ss_pred             HHHHHhcccCCCCCCCHHHHHHHhccc
Q 006915          559 NVGLLCVQEDPNDRPTMSDVVIMLGSE  585 (626)
Q Consensus       559 ~~~~~C~~~~p~~RPs~~~vl~~L~~~  585 (626)
                      +++..||+.+|.+||++.++++.|..+
T Consensus       239 ~li~~cl~~~p~~Rp~~~~vl~~~~~~  265 (267)
T cd08228         239 ELVSMCIYPDPDQRPDIGYVHQIAKQM  265 (267)
T ss_pred             HHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence            888899999999999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.81  E-value=8.5e-20  Score=187.43  Aligned_cols=179  Identities=27%  Similarity=0.418  Sum_probs=126.2

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCc--EEEEEEecCC-CcccHHHHHHHHH-------hccccceecchHH--HHHHh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQ--QIAVKRLSSA-SGQGLEEFKNEIE-------TSNSNATIGANVK--AFVRE  471 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~--~vAvK~l~~~-~~~~~~~~~~e~~-------~~~~~~~~~~~~~--~~~~~  471 (626)
                      ++|++.+.||+|+||.||+|.+. ++.  .+|+|.++.. .......+.+|++       +++++++.+.+..  .++..
T Consensus         7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv   86 (303)
T cd05088           7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA   86 (303)
T ss_pred             hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence            46778899999999999999874 344  4688887643 2233445666644       4666666654332  23344


Q ss_pred             hccccCCCcc----------------------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcE
Q 006915          472 MKTFSDPTLS----------------------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNP  529 (626)
Q Consensus       472 ~~~~~~~~l~----------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~  529 (626)
                      ++++.++++.                      ..+++..++.++.||+.||+|||+.+   |+||||||+|||+++++.+
T Consensus        87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dlkp~Nili~~~~~~  163 (303)
T cd05088          87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVA  163 (303)
T ss_pred             EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEecCCCcE
Confidence            4554444332                      24678889999999999999999987   9999999999999999999


Q ss_pred             EEEecCcchhc---------------cccc----------------------------cC------------------CC
Q 006915          530 KISDFGLALDM---------------MDQK----------------------------LH------------------AS  548 (626)
Q Consensus       530 kl~DFGla~~~---------------~~~~----------------------------~~------------------~~  548 (626)
                      ||+|||++...               +.+.                            ..                  ..
T Consensus       164 kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~  243 (303)
T cd05088         164 KIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLE  243 (303)
T ss_pred             EeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCcCC
Confidence            99999987210               0000                            00                  00


Q ss_pred             CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 006915          549 SKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEA  586 (626)
Q Consensus       549 ~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~  586 (626)
                      .+......+.+++..|++.+|.+||++.+++++|+.+.
T Consensus       244 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~  281 (303)
T cd05088         244 KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML  281 (303)
T ss_pred             CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            00011235667888999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.81  E-value=8.5e-20  Score=184.98  Aligned_cols=176  Identities=25%  Similarity=0.391  Sum_probs=126.0

Q ss_pred             cCccccccccccCeEEEEEEEcCC------CcEEEEEEecCCCcc-cHHHHHHHHHh------ccccceecchHH--HHH
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFPG------GQQIAVKRLSSASGQ-GLEEFKNEIET------SNSNATIGANVK--AFV  469 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~~------~~~vAvK~l~~~~~~-~~~~~~~e~~~------~~~~~~~~~~~~--~~~  469 (626)
                      +.|.+.+.||+|+||.||+|...+      ++.||||.++..... ....|.+|++.      ++++.+.+....  .++
T Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   84 (280)
T cd05049           5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI   84 (280)
T ss_pred             HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence            457778999999999999998633      478999999864433 45677777654      555555443332  222


Q ss_pred             HhhccccCCCcc--------------------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcE
Q 006915          470 REMKTFSDPTLS--------------------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNP  529 (626)
Q Consensus       470 ~~~~~~~~~~l~--------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~  529 (626)
                      ..++++.++++.                    ..+++.....++.|++.||.|||+.+   ++||||||+|||++.++.+
T Consensus        85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~~  161 (280)
T cd05049          85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQH---FVHRDLATRNCLVGYDLVV  161 (280)
T ss_pred             EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eeccccccceEEEcCCCeE
Confidence            334444443332                    23677888999999999999999998   9999999999999999999


Q ss_pred             EEEecCcchhcc------------------cccc-----------------------C-CCC------------------
Q 006915          530 KISDFGLALDMM------------------DQKL-----------------------H-ASS------------------  549 (626)
Q Consensus       530 kl~DFGla~~~~------------------~~~~-----------------------~-~~~------------------  549 (626)
                      ||+|||++..+.                  .++.                       . +..                  
T Consensus       162 kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~~~  241 (280)
T cd05049         162 KIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQGR  241 (280)
T ss_pred             EECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC
Confidence            999999873211                  0000                       0 000                  


Q ss_pred             ----ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 006915          550 ----KPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLG  583 (626)
Q Consensus       550 ----~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~  583 (626)
                          +......+.+++..||+.+|.+||++.++++.|+
T Consensus       242 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~  279 (280)
T cd05049         242 LLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ  279 (280)
T ss_pred             cCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence                0011235677888999999999999999999885

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.81  E-value=1e-19  Score=191.22  Aligned_cols=132  Identities=25%  Similarity=0.287  Sum_probs=101.5

Q ss_pred             HhhcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCcccHHHHHHHHHhccccceecchHH--HHHHhhccccCC
Q 006915          402 AATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVK--AFVREMKTFSDP  478 (626)
Q Consensus       402 ~~~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~e~~~~~~~~~~~~~~~--~~~~~~~~~~~~  478 (626)
                      ....+|.+.+.||+|+||.||+|+.. .++.||+|.........+..+...+.++|++++++....  ..+.+++++. +
T Consensus        63 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~  141 (357)
T PHA03209         63 VASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKGTTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYS-S  141 (357)
T ss_pred             hhhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCccccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEccC-C
Confidence            44567999999999999999999885 478999998665443344455666677888887764432  1112222222 1


Q ss_pred             Cc-------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          479 TL-------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       479 ~l-------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++       ...+++..++.|+.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus       142 ~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a  204 (357)
T PHA03209        142 DLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQR---IIHRDVKTENIFINDVDQVCIGDLGAA  204 (357)
T ss_pred             cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEecCccc
Confidence            11       234788999999999999999999998   999999999999999999999999987

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.80  E-value=1.2e-19  Score=185.41  Aligned_cols=132  Identities=28%  Similarity=0.430  Sum_probs=98.7

Q ss_pred             hcCccccccccccCeEEEEEEEcCC-----------------CcEEEEEEecCCC-cccHHHHHHHHHh------ccccc
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFPG-----------------GQQIAVKRLSSAS-GQGLEEFKNEIET------SNSNA  459 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~~-----------------~~~vAvK~l~~~~-~~~~~~~~~e~~~------~~~~~  459 (626)
                      .++|++.+.||+|+||.||+++..+                 +..||+|.+.... ....+++.+|++.      ++++.
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   83 (296)
T cd05051           4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR   83 (296)
T ss_pred             hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence            4578888999999999999997642                 2468999987543 2344566666543      66666


Q ss_pred             eecchHH--HHHHhhccccCCCcc-----------------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCC
Q 006915          460 TIGANVK--AFVREMKTFSDPTLS-----------------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSN  520 (626)
Q Consensus       460 ~~~~~~~--~~~~~~~~~~~~~l~-----------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~N  520 (626)
                      +.+.+..  .++..+++..++++.                 ..+++...+.++.|++.||.|||+.+   |+||||||+|
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~---i~H~dlkp~N  160 (296)
T cd05051          84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN---FVHRDLATRN  160 (296)
T ss_pred             EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhc
Confidence            6654332  222334444443332                 24678889999999999999999987   9999999999


Q ss_pred             eEECCCCcEEEEecCcch
Q 006915          521 ILLDQEMNPKISDFGLAL  538 (626)
Q Consensus       521 ILl~~~~~~kl~DFGla~  538 (626)
                      |++++++.+||+|||++.
T Consensus       161 ili~~~~~~~l~dfg~~~  178 (296)
T cd05051         161 CLVGKNYTIKIADFGMSR  178 (296)
T ss_pred             eeecCCCceEEcccccee
Confidence            999999999999999873

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.80  E-value=1.6e-19  Score=181.72  Aligned_cols=179  Identities=24%  Similarity=0.373  Sum_probs=129.2

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CC---cEEEEEEecCCC-cccHHHHHHHHHh------ccccceecchHH--HHHH
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GG---QQIAVKRLSSAS-GQGLEEFKNEIET------SNSNATIGANVK--AFVR  470 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~---~~vAvK~l~~~~-~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~  470 (626)
                      .++|+..+.||+|+||.||+|+.. ++   ..+|||.++... ....+++.+|++.      ++++++.+....  .++.
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   83 (268)
T cd05063           4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI   83 (268)
T ss_pred             hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence            346778899999999999999874 23   379999987542 2334556666543      566666554432  2334


Q ss_pred             hhccccCCCcc-------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhcc--
Q 006915          471 EMKTFSDPTLS-------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMM--  541 (626)
Q Consensus       471 ~~~~~~~~~l~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~--  541 (626)
                      .++++.++++.       ..+++.++..++.|++.||+|||+.+   ++||||||+||++++++.+||+|||++..+.  
T Consensus        84 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~  160 (268)
T cd05063          84 ITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMN---YVHRDLAARNILVNSNLECKVSDFGLSRVLEDD  160 (268)
T ss_pred             EEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEEcCCCcEEECCCccceecccc
Confidence            55666555543       24678889999999999999999987   9999999999999999999999999872111  


Q ss_pred             -----------------cccc-----------------------C-CC----------------------CChHHHHHHH
Q 006915          542 -----------------DQKL-----------------------H-AS----------------------SKPNEILKCI  558 (626)
Q Consensus       542 -----------------~~~~-----------------------~-~~----------------------~~~~~~~~~~  558 (626)
                                       .+..                       . ..                      ........+.
T Consensus       161 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  240 (268)
T cd05063         161 PEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGFRLPAPMDCPSAVY  240 (268)
T ss_pred             cccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCCCCCCCCCCCHHHH
Confidence                             0000                       0 00                      0001123567


Q ss_pred             HHHHHhcccCCCCCCCHHHHHHHhccc
Q 006915          559 NVGLLCVQEDPNDRPTMSDVVIMLGSE  585 (626)
Q Consensus       559 ~~~~~C~~~~p~~RPs~~~vl~~L~~~  585 (626)
                      +++..|++.+|.+||++.++++.|..+
T Consensus       241 ~li~~c~~~~p~~Rp~~~~i~~~l~~~  267 (268)
T cd05063         241 QLMLQCWQQDRARRPRFVDIVNLLDKL  267 (268)
T ss_pred             HHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            888899999999999999999999764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.80  E-value=1.2e-19  Score=183.69  Aligned_cols=178  Identities=26%  Similarity=0.381  Sum_probs=127.0

Q ss_pred             hhcCccccccccccCeEEEEEEEcCC------CcEEEEEEecCCC-cccHHHHHHHHHh------ccccceecchHH--H
Q 006915          403 ATDNFSEANKLGKGGFGPVYKAKFPG------GQQIAVKRLSSAS-GQGLEEFKNEIET------SNSNATIGANVK--A  467 (626)
Q Consensus       403 ~~~~f~~~~~lG~G~fG~Vy~~~~~~------~~~vAvK~l~~~~-~~~~~~~~~e~~~------~~~~~~~~~~~~--~  467 (626)
                      ++++|.+.+.||+|+||.||+|.+.+      +..||+|.+.... ......|.+|+..      ++++++++....  .
T Consensus         4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   83 (277)
T cd05036           4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP   83 (277)
T ss_pred             CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence            35678889999999999999998743      5689999887433 2334456666543      666666664433  2


Q ss_pred             HHHhhccccCCCccc-------------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCC---cEEE
Q 006915          468 FVREMKTFSDPTLSA-------------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEM---NPKI  531 (626)
Q Consensus       468 ~~~~~~~~~~~~l~~-------------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~---~~kl  531 (626)
                      ++..++++.++++..             .+++..++.++.||+.||+|||+.+   ++||||||+|||++.++   .+||
T Consensus        84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~nil~~~~~~~~~~kl  160 (277)
T cd05036          84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH---FIHRDIAARNCLLTCKGPGRVAKI  160 (277)
T ss_pred             cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchheEEEeccCCCcceEe
Confidence            333445554444432             4778899999999999999999998   99999999999998754   5999


Q ss_pred             EecCcchhccc------------------cc----------------------------cC-CCCC--------------
Q 006915          532 SDFGLALDMMD------------------QK----------------------------LH-ASSK--------------  550 (626)
Q Consensus       532 ~DFGla~~~~~------------------~~----------------------------~~-~~~~--------------  550 (626)
                      +|||++..+..                  +.                            .. ....              
T Consensus       161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~  240 (277)
T cd05036         161 ADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGGGRL  240 (277)
T ss_pred             ccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcC
Confidence            99998743210                  00                            00 0000              


Q ss_pred             ---hHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 006915          551 ---PNEILKCINVGLLCVQEDPNDRPTMSDVVIMLG  583 (626)
Q Consensus       551 ---~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~  583 (626)
                         ......+.+++..|++.+|++||++.++++.|+
T Consensus       241 ~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~  276 (277)
T cd05036         241 DPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ  276 (277)
T ss_pred             CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence               011124567888999999999999999999885

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.80  E-value=7.8e-20  Score=187.80  Aligned_cols=179  Identities=27%  Similarity=0.345  Sum_probs=125.2

Q ss_pred             hcCccccccccccCeEEEEEEEcC--------CCcEEEEEEecCCC-cccHHHHHHHHH-------hccccceecchHH-
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP--------GGQQIAVKRLSSAS-GQGLEEFKNEIE-------TSNSNATIGANVK-  466 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~--------~~~~vAvK~l~~~~-~~~~~~~~~e~~-------~~~~~~~~~~~~~-  466 (626)
                      .++|.+.+.||+|+||.||+++..        ++..||+|.+.... .....++.+|+.       +++++++.+.+.. 
T Consensus        14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~   93 (304)
T cd05101          14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD   93 (304)
T ss_pred             HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence            456788899999999999999741        24579999987432 233445556643       4666666554322 


Q ss_pred             -HHHHhhccccCCCcc----------------------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEE
Q 006915          467 -AFVREMKTFSDPTLS----------------------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILL  523 (626)
Q Consensus       467 -~~~~~~~~~~~~~l~----------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl  523 (626)
                       .++..+++..++++.                      ..+++..++.++.||+.||.|||+.+   |+||||||+|||+
T Consensus        94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~Nili  170 (304)
T cd05101          94 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK---CIHRDLAARNVLV  170 (304)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC---eeecccccceEEE
Confidence             122233333333321                      24677888999999999999999998   9999999999999


Q ss_pred             CCCCcEEEEecCcchhcc------------------ccccC------------------------CC-----CCh-----
Q 006915          524 DQEMNPKISDFGLALDMM------------------DQKLH------------------------AS-----SKP-----  551 (626)
Q Consensus       524 ~~~~~~kl~DFGla~~~~------------------~~~~~------------------------~~-----~~~-----  551 (626)
                      ++++.+||+|||++..+.                  .+...                        ..     .+.     
T Consensus       171 ~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~  250 (304)
T cd05101         171 TENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK  250 (304)
T ss_pred             cCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHH
Confidence            999999999999873211                  01000                        00     001     


Q ss_pred             ------------HHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 006915          552 ------------NEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSE  585 (626)
Q Consensus       552 ------------~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~  585 (626)
                                  .....+..++..||+.+|.+||++.++++.|..+
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~  296 (304)
T cd05101         251 LLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRI  296 (304)
T ss_pred             HHHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHH
Confidence                        1123566788899999999999999999999876

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.80  E-value=8.1e-20  Score=185.26  Aligned_cols=181  Identities=22%  Similarity=0.297  Sum_probs=130.4

Q ss_pred             hhcCccccccccccCeEEEEEEEcCC-----CcEEEEEEecCCC-cccHHHHHHHH------HhccccceecchHH---H
Q 006915          403 ATDNFSEANKLGKGGFGPVYKAKFPG-----GQQIAVKRLSSAS-GQGLEEFKNEI------ETSNSNATIGANVK---A  467 (626)
Q Consensus       403 ~~~~f~~~~~lG~G~fG~Vy~~~~~~-----~~~vAvK~l~~~~-~~~~~~~~~e~------~~~~~~~~~~~~~~---~  467 (626)
                      ..++|.+.+.||+|+||.||+|....     +..||+|++.... ......+.+|+      .++|++++.+.+..   .
T Consensus         4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~   83 (280)
T cd05043           4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP   83 (280)
T ss_pred             chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence            35678888999999999999998755     6889999987532 23345566665      35777777775443   1


Q ss_pred             HHHhhccccCCCc--------------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEe
Q 006915          468 FVREMKTFSDPTL--------------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISD  533 (626)
Q Consensus       468 ~~~~~~~~~~~~l--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~D  533 (626)
                      .+..+++...+++              ...+.+..++.++.|++.||+|||+.+   ++||||||+|||+++++.+||+|
T Consensus        84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kl~d  160 (280)
T cd05043          84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRG---VIHKDIAARNCVIDEELQVKITD  160 (280)
T ss_pred             CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCHhhEEEcCCCcEEECC
Confidence            1111222222222              134778899999999999999999987   99999999999999999999999


Q ss_pred             cCcchhcccc------------------c----------------------------cCC------------------CC
Q 006915          534 FGLALDMMDQ------------------K----------------------------LHA------------------SS  549 (626)
Q Consensus       534 FGla~~~~~~------------------~----------------------------~~~------------------~~  549 (626)
                      ||+++.+...                  .                            .+.                  ..
T Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~  240 (280)
T cd05043         161 NALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDGYRLAQ  240 (280)
T ss_pred             CCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcCCCCCC
Confidence            9998432110                  0                            000                  00


Q ss_pred             ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 006915          550 KPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEA  586 (626)
Q Consensus       550 ~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~  586 (626)
                      .......+.+++..||+.+|++||++.+++..|+...
T Consensus       241 ~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~  277 (280)
T cd05043         241 PINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFH  277 (280)
T ss_pred             CCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence            0011235778889999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.80  E-value=1.1e-19  Score=189.18  Aligned_cols=132  Identities=30%  Similarity=0.380  Sum_probs=102.4

Q ss_pred             hhcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCC----Cc-ccHHHHHHHHH-------hccccceecchHH--H
Q 006915          403 ATDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSA----SG-QGLEEFKNEIE-------TSNSNATIGANVK--A  467 (626)
Q Consensus       403 ~~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~----~~-~~~~~~~~e~~-------~~~~~~~~~~~~~--~  467 (626)
                      ..++|.+.+.||+|+||.|++|+. .+++.||||.+...    .. ...+.+.+|+.       ++|++++......  .
T Consensus        15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~   94 (370)
T KOG0583|consen   15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK   94 (370)
T ss_pred             ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence            456889999999999999999987 46899999977653    11 22334445553       4566666543221  3


Q ss_pred             HHHhhccccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCC-CcEEEEecCcc
Q 006915          468 FVREMKTFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQE-MNPKISDFGLA  537 (626)
Q Consensus       468 ~~~~~~~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~-~~~kl~DFGla  537 (626)
                      ++.+|++..++.+..      .|.+.....++.|++.|++|+|+.+   |+||||||+|||++.+ +++||+|||++
T Consensus        95 ~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~g---i~HRDLK~ENilld~~~~~~Kl~DFG~s  168 (370)
T KOG0583|consen   95 IYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRG---IVHRDLKPENILLDGNEGNLKLSDFGLS  168 (370)
T ss_pred             EEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEecCCCCCEEEeccccc
Confidence            556677777766543      4667788899999999999999998   9999999999999999 99999999998

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.80  E-value=1.4e-19  Score=180.91  Aligned_cols=174  Identities=22%  Similarity=0.350  Sum_probs=126.2

Q ss_pred             cCccccccccccCeEEEEEEEcCCCcEEEEEEecCCCcccHHHHHHHHH------hccccceecchHH---HHHHhhccc
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIE------TSNSNATIGANVK---AFVREMKTF  475 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~e~~------~~~~~~~~~~~~~---~~~~~~~~~  475 (626)
                      ++|.+.+.||+|+||.||++... +..||+|.++...  ..+.|.+|+.      +.+++.+.+....   ..+..++++
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~   82 (256)
T cd05082           6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM   82 (256)
T ss_pred             HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECC
Confidence            46778899999999999999874 7889999987532  2345666654      3666666654322   223345555


Q ss_pred             cCCCccc--------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhccc-----
Q 006915          476 SDPTLSA--------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD-----  542 (626)
Q Consensus       476 ~~~~l~~--------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~-----  542 (626)
                      .++++..        .+++..++.++.|++.||+|||+.+   |+||||||+||++++++.+||+|||++.....     
T Consensus        83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~  159 (256)
T cd05082          83 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG  159 (256)
T ss_pred             CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeccccchheEEEcCCCcEEecCCccceeccccCCCC
Confidence            5544432        3678888999999999999999987   99999999999999999999999998722110     


Q ss_pred             ------------------------------------cccCC-CCCh-----------------HHHHHHHHHHHHhcccC
Q 006915          543 ------------------------------------QKLHA-SSKP-----------------NEILKCINVGLLCVQED  568 (626)
Q Consensus       543 ------------------------------------~~~~~-~~~~-----------------~~~~~~~~~~~~C~~~~  568 (626)
                                                          ..... ....                 .....+.+++..|++.+
T Consensus       160 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  239 (256)
T cd05082         160 KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPVVYDVMKQCWHLD  239 (256)
T ss_pred             ccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhcCC
Confidence                                                00000 0001                 11235678888999999


Q ss_pred             CCCCCCHHHHHHHhcc
Q 006915          569 PNDRPTMSDVVIMLGS  584 (626)
Q Consensus       569 p~~RPs~~~vl~~L~~  584 (626)
                      |.+||++.++++.|..
T Consensus       240 p~~Rpt~~~l~~~l~~  255 (256)
T cd05082         240 AATRPSFLQLREQLEH  255 (256)
T ss_pred             hhhCcCHHHHHHHHhc
Confidence            9999999999998864

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.80  E-value=1.3e-19  Score=192.25  Aligned_cols=130  Identities=19%  Similarity=0.241  Sum_probs=99.7

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCcccHHHHHHHHHhccccceecchHH--HHHHhhccccCCCc
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVK--AFVREMKTFSDPTL  480 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~e~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l  480 (626)
                      .++|++.+.||+|+||.||++... .++.||||.........+.++...+.++|++++.+....  ..+..++++. +++
T Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~-~~L  169 (391)
T PHA03212         91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQRGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRYK-TDL  169 (391)
T ss_pred             cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhhhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecCC-CCH
Confidence            457999999999999999999874 588999998764333334455666677888888764321  1112222222 222


Q ss_pred             ------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          481 ------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       481 ------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                            ...+++..++.++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||+|
T Consensus       170 ~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~---IvHrDiKP~NIll~~~~~vkL~DFG~a  229 (391)
T PHA03212        170 YCYLAAKRNIAICDILAIERSVLRAIQYLHENR---IIHRDIKAENIFINHPGDVCLGDFGAA  229 (391)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHhEEEcCCCCEEEEeCCcc
Confidence                  224678889999999999999999997   999999999999999999999999987

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=99.80  E-value=2e-20  Score=178.00  Aligned_cols=183  Identities=23%  Similarity=0.238  Sum_probs=127.4

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCc---ccH------HHHHHHHHhccccceecchHH--HHHHh
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASG---QGL------EEFKNEIETSNSNATIGANVK--AFVRE  471 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~---~~~------~~~~~e~~~~~~~~~~~~~~~--~~~~~  471 (626)
                      .++|+..+.||.|+||.|.+++.+ +|..+|+|++++..-   .+.      +.++..+.++.++++.+.+..  .+..+
T Consensus        43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymv  122 (355)
T KOG0616|consen   43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMV  122 (355)
T ss_pred             hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEE
Confidence            346788899999999999999985 488999999985421   112      223333444666666654433  45567


Q ss_pred             hccccCCCcccC------CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhcccccc
Q 006915          472 MKTFSDPTLSAL------LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKL  545 (626)
Q Consensus       472 ~~~~~~~~l~~~------l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~  545 (626)
                      |++..++.+..+      ++.....-+|.||+.||+|||+.+   |++|||||+|||||.+|.+||+|||+|+.+.+...
T Consensus       123 meyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~---iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT~  199 (355)
T KOG0616|consen  123 MEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLD---IIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRTW  199 (355)
T ss_pred             EeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcC---eeeccCChHHeeeccCCcEEEEeccceEEecCcEE
Confidence            888888776544      556677789999999999999998   99999999999999999999999999977665533


Q ss_pred             CCCCChHHH-HHHHHHHHHhcccCCCCCCCHHHHHHHhccccccCCCCCCCceee
Q 006915          546 HASSKPNEI-LKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAFVI  599 (626)
Q Consensus       546 ~~~~~~~~~-~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~P~~~~  599 (626)
                      .--..++.+ ++++       +..|   -.-+-+.+.|+...+|+..+.+|.+..
T Consensus       200 TlCGTPeYLAPEii-------~sk~---ynkavDWWalGVLIYEMlaG~pPF~~~  244 (355)
T KOG0616|consen  200 TLCGTPEYLAPEII-------QSKG---YNKAVDWWALGVLIYEMLAGYPPFYDD  244 (355)
T ss_pred             EecCCccccChHHh-------hcCC---CCcchhHHHHHHHHHHHHcCCCCCcCC
Confidence            221122111 1111       1112   233456677777777777777776554

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.80  E-value=1.1e-19  Score=185.02  Aligned_cols=177  Identities=27%  Similarity=0.412  Sum_probs=126.3

Q ss_pred             hcCccccccccccCeEEEEEEEcC------CCcEEEEEEecCCC-cccHHHHHHHHH------hccccceecchHH--HH
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP------GGQQIAVKRLSSAS-GQGLEEFKNEIE------TSNSNATIGANVK--AF  468 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~------~~~~vAvK~l~~~~-~~~~~~~~~e~~------~~~~~~~~~~~~~--~~  468 (626)
                      .++|+..+.||+|+||.||+++..      ++..||+|.+.... .....+|.+|+.      +++++++.+.+..  .+
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~   83 (288)
T cd05050           4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM   83 (288)
T ss_pred             hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence            467888899999999999999863      46789999987543 233455766655      3666666654332  22


Q ss_pred             HHhhccccCCCcc----------------------------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCC
Q 006915          469 VREMKTFSDPTLS----------------------------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSN  520 (626)
Q Consensus       469 ~~~~~~~~~~~l~----------------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~N  520 (626)
                      +..+++..++++.                            ..+++..++.++.|++.||.|||+.+   ++||||||+|
T Consensus        84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~---i~H~dl~p~n  160 (288)
T cd05050          84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK---FVHRDLATRN  160 (288)
T ss_pred             EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---eecccccHhh
Confidence            2233333333221                            13567888999999999999999987   9999999999


Q ss_pred             eEECCCCcEEEEecCcchhcc------------------cccc-----------------------C-C--C---C----
Q 006915          521 ILLDQEMNPKISDFGLALDMM------------------DQKL-----------------------H-A--S---S----  549 (626)
Q Consensus       521 ILl~~~~~~kl~DFGla~~~~------------------~~~~-----------------------~-~--~---~----  549 (626)
                      ||+++++.+||+|||++..+.                  .+..                       . .  .   .    
T Consensus       161 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~  240 (288)
T cd05050         161 CLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEE  240 (288)
T ss_pred             eEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence            999999999999999872110                  0000                       0 0  0   0    


Q ss_pred             -------------ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 006915          550 -------------KPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLG  583 (626)
Q Consensus       550 -------------~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~  583 (626)
                                   +......+.+++.+|++.+|.+||++.|+++.|+
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~  287 (288)
T cd05050         241 VIYYVRDGNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQ  287 (288)
T ss_pred             HHHHHhcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence                         0112246788899999999999999999999886

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.80  E-value=1.6e-19  Score=184.65  Aligned_cols=132  Identities=25%  Similarity=0.380  Sum_probs=97.3

Q ss_pred             hcCccccccccccCeEEEEEEEcC-----------------CCcEEEEEEecCCC-cccHHHHHHHHH------hccccc
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-----------------GGQQIAVKRLSSAS-GQGLEEFKNEIE------TSNSNA  459 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-----------------~~~~vAvK~l~~~~-~~~~~~~~~e~~------~~~~~~  459 (626)
                      .++|++.+.||+|+||.||+++..                 +...||||.+.... ......|.+|++      +++++.
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~   83 (296)
T cd05095           4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR   83 (296)
T ss_pred             hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence            356888999999999999998532                 24479999997542 233456666655      366666


Q ss_pred             eecchHH--HHHHhhccccCCCcc-----------------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCC
Q 006915          460 TIGANVK--AFVREMKTFSDPTLS-----------------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSN  520 (626)
Q Consensus       460 ~~~~~~~--~~~~~~~~~~~~~l~-----------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~N  520 (626)
                      +.+....  .++..++++.++++.                 ..+++.....++.|++.||+|||+.+   ++||||||+|
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dlkp~N  160 (296)
T cd05095          84 LLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN---FVHRDLATRN  160 (296)
T ss_pred             EEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCC---eecccCChhe
Confidence            6554322  222334444433332                 23567789999999999999999998   9999999999


Q ss_pred             eEECCCCcEEEEecCcch
Q 006915          521 ILLDQEMNPKISDFGLAL  538 (626)
Q Consensus       521 ILl~~~~~~kl~DFGla~  538 (626)
                      ||++.++.+||+|||++.
T Consensus       161 ili~~~~~~~l~dfg~~~  178 (296)
T cd05095         161 CLVGKNYTIKIADFGMSR  178 (296)
T ss_pred             EEEcCCCCEEeccCcccc
Confidence            999999999999999984

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.80  E-value=1.5e-19  Score=183.35  Aligned_cols=176  Identities=26%  Similarity=0.348  Sum_probs=126.6

Q ss_pred             cCccccccccccCeEEEEEEEcC------CCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH--HHHH
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP------GGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK--AFVR  470 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~------~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~  470 (626)
                      .+|...++||+|+||.||++...      ++..+|+|.+..........|.+|++.      ++++.+.+....  .++.
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (280)
T cd05092           5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM   84 (280)
T ss_pred             HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence            35667789999999999999642      356899999886655556677777654      666666554332  2223


Q ss_pred             hhccccCCCcc---------------------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcE
Q 006915          471 EMKTFSDPTLS---------------------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNP  529 (626)
Q Consensus       471 ~~~~~~~~~l~---------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~  529 (626)
                      .++++.++++.                     ..+++..++.++.|++.||+|||+.+   ++||||||+|||+++++.+
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~nil~~~~~~~  161 (280)
T cd05092          85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH---FVHRDLATRNCLVGQGLVV  161 (280)
T ss_pred             EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC---eecccccHhhEEEcCCCCE
Confidence            34444443332                     24678899999999999999999988   9999999999999999999


Q ss_pred             EEEecCcchhcc------------------ccc----------------------------cCC----------------
Q 006915          530 KISDFGLALDMM------------------DQK----------------------------LHA----------------  547 (626)
Q Consensus       530 kl~DFGla~~~~------------------~~~----------------------------~~~----------------  547 (626)
                      ||+|||++..+.                  .+.                            ...                
T Consensus       162 kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~  241 (280)
T cd05092         162 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQGR  241 (280)
T ss_pred             EECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHHcCc
Confidence            999999872110                  000                            000                


Q ss_pred             --CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 006915          548 --SSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLG  583 (626)
Q Consensus       548 --~~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~  583 (626)
                        ..+......+.+++..||+.+|.+||++.+++..|+
T Consensus       242 ~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~  279 (280)
T cd05092         242 ELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ  279 (280)
T ss_pred             cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence              000111245678888999999999999999999885

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.80  E-value=8.2e-20  Score=187.93  Aligned_cols=180  Identities=28%  Similarity=0.358  Sum_probs=127.3

Q ss_pred             hcCccccccccccCeEEEEEEEcC--------CCcEEEEEEecCCC-cccHHHHHHHHH-------hccccceecchHH-
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP--------GGQQIAVKRLSSAS-GQGLEEFKNEIE-------TSNSNATIGANVK-  466 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~--------~~~~vAvK~l~~~~-~~~~~~~~~e~~-------~~~~~~~~~~~~~-  466 (626)
                      .++|.+.+.||+|+||.||+++..        ....+|+|.+.... .....++..|++       +++++++.+.+.. 
T Consensus        17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~   96 (307)
T cd05098          17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD   96 (307)
T ss_pred             hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence            356889999999999999999752        23579999997532 233445666653       4666666654332 


Q ss_pred             -HHHHhhccccCCCc----------------------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEE
Q 006915          467 -AFVREMKTFSDPTL----------------------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILL  523 (626)
Q Consensus       467 -~~~~~~~~~~~~~l----------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl  523 (626)
                       .++..+++...+++                      ...+++..+++++.|++.||+|||+.+   ++||||||+|||+
T Consensus        97 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~Nill  173 (307)
T cd05098          97 GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLV  173 (307)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHHheEE
Confidence             22233444433322                      124778899999999999999999987   9999999999999


Q ss_pred             CCCCcEEEEecCcchhcc------------------cccc-----------------------C-C--------------
Q 006915          524 DQEMNPKISDFGLALDMM------------------DQKL-----------------------H-A--------------  547 (626)
Q Consensus       524 ~~~~~~kl~DFGla~~~~------------------~~~~-----------------------~-~--------------  547 (626)
                      +.++.+||+|||++..+.                  .+..                       . .              
T Consensus       174 ~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~  253 (307)
T cd05098         174 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK  253 (307)
T ss_pred             cCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHH
Confidence            999999999999873211                  0000                       0 0              


Q ss_pred             --------CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 006915          548 --------SSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEA  586 (626)
Q Consensus       548 --------~~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~  586 (626)
                              ..+......+.+++..|++.+|.+||++.++++.|..+.
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~  300 (307)
T cd05098         254 LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL  300 (307)
T ss_pred             HHHcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHH
Confidence                    000111235667888999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.80  E-value=2.1e-19  Score=180.09  Aligned_cols=176  Identities=24%  Similarity=0.376  Sum_probs=126.6

Q ss_pred             cCccccccccccCeEEEEEEEcCCCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH-HHHHhhccccC
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK-AFVREMKTFSD  477 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~-~~~~~~~~~~~  477 (626)
                      ++|.+.+.||+|+||.||+|...++..+|+|.+.... ...+.+.+|+..      ++++.+.+.... ..+..+++..+
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~   84 (260)
T cd05069           6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVSEEPIYIVTEFMGK   84 (260)
T ss_pred             HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCcEEEEEcCCC
Confidence            4577889999999999999998777789999987533 234456666543      566655543322 22234455554


Q ss_pred             CCccc--------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhcc--------
Q 006915          478 PTLSA--------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMM--------  541 (626)
Q Consensus       478 ~~l~~--------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~--------  541 (626)
                      +++..        .+++..+..++.|++.||.|||+.+   ++|+||||+||++++++.+||+|||++..+.        
T Consensus        85 ~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~  161 (260)
T cd05069          85 GSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMN---YIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQ  161 (260)
T ss_pred             CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCeEEECCCccceEccCCcccccC
Confidence            44422        3678889999999999999999987   9999999999999999999999999872110        


Q ss_pred             ------------------------------------c-cccCC------------------CCChHHHHHHHHHHHHhcc
Q 006915          542 ------------------------------------D-QKLHA------------------SSKPNEILKCINVGLLCVQ  566 (626)
Q Consensus       542 ------------------------------------~-~~~~~------------------~~~~~~~~~~~~~~~~C~~  566 (626)
                                                          . .....                  ..+......+.+++..|++
T Consensus       162 ~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  241 (260)
T cd05069         162 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYRMPCPQGCPESLHELMKLCWK  241 (260)
T ss_pred             CCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCHHHHHHHHHHcc
Confidence                                                0 00000                  0001122356778889999


Q ss_pred             cCCCCCCCHHHHHHHhcc
Q 006915          567 EDPNDRPTMSDVVIMLGS  584 (626)
Q Consensus       567 ~~p~~RPs~~~vl~~L~~  584 (626)
                      .+|.+||++.++++.|+.
T Consensus       242 ~~p~~Rp~~~~i~~~l~~  259 (260)
T cd05069         242 KDPDERPTFEYIQSFLED  259 (260)
T ss_pred             CCcccCcCHHHHHHHHhc
Confidence            999999999999998864

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.80  E-value=1.3e-19  Score=183.37  Aligned_cols=177  Identities=24%  Similarity=0.390  Sum_probs=126.9

Q ss_pred             hcCccccccccccCeEEEEEEEcCC------CcEEEEEEecCCC-cccHHHHHHHHHh------ccccceecchHH--HH
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFPG------GQQIAVKRLSSAS-GQGLEEFKNEIET------SNSNATIGANVK--AF  468 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~~------~~~vAvK~l~~~~-~~~~~~~~~e~~~------~~~~~~~~~~~~--~~  468 (626)
                      .++|.+.+.||+|+||.||+|...+      +..||+|.+.... ......+.+|+..      ++++++.+....  .+
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~   84 (277)
T cd05032           5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT   84 (277)
T ss_pred             hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence            3578888999999999999998642      4689999987543 2334456666553      666666654332  22


Q ss_pred             HHhhccccCCCccc----------------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEE
Q 006915          469 VREMKTFSDPTLSA----------------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKIS  532 (626)
Q Consensus       469 ~~~~~~~~~~~l~~----------------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~  532 (626)
                      +..++++.++++..                .+.+..++.++.|++.||.|||+.+   |+||||||+|||++.++.+||+
T Consensus        85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~di~p~nill~~~~~~kl~  161 (277)
T cd05032          85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKK---FVHRDLAARNCMVAEDLTVKIG  161 (277)
T ss_pred             EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccChheEEEcCCCCEEEC
Confidence            23444444444332                3567888999999999999999987   9999999999999999999999


Q ss_pred             ecCcchhcccc------------------c----------------------------cC------------------CC
Q 006915          533 DFGLALDMMDQ------------------K----------------------------LH------------------AS  548 (626)
Q Consensus       533 DFGla~~~~~~------------------~----------------------------~~------------------~~  548 (626)
                      |||++..+...                  .                            ..                  ..
T Consensus       162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~  241 (277)
T cd05032         162 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGGHLD  241 (277)
T ss_pred             CcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHhcCCCCC
Confidence            99987321110                  0                            00                  00


Q ss_pred             CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 006915          549 SKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLG  583 (626)
Q Consensus       549 ~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~  583 (626)
                      .+......+.+++..||+.+|.+|||+.+++..|+
T Consensus       242 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~  276 (277)
T cd05032         242 LPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK  276 (277)
T ss_pred             CCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence            01112245678888999999999999999999886

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.80  E-value=2.6e-19  Score=186.56  Aligned_cols=179  Identities=27%  Similarity=0.361  Sum_probs=125.5

Q ss_pred             cCccccccccccCeEEEEEEEcC--------CCcEEEEEEecCCC-cccHHHHHHHHH-------hccccceecchHH--
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP--------GGQQIAVKRLSSAS-GQGLEEFKNEIE-------TSNSNATIGANVK--  466 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~--------~~~~vAvK~l~~~~-~~~~~~~~~e~~-------~~~~~~~~~~~~~--  466 (626)
                      .+|.+.+.||+|+||.||+++..        ....||+|.++... .....++.+|++       +++++++.+.+..  
T Consensus        12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~   91 (334)
T cd05100          12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG   91 (334)
T ss_pred             hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence            35788899999999999999742        12379999887432 223445555543       4666666654432  


Q ss_pred             HHHHhhccccCCCcc----------------------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEEC
Q 006915          467 AFVREMKTFSDPTLS----------------------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLD  524 (626)
Q Consensus       467 ~~~~~~~~~~~~~l~----------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~  524 (626)
                      .++..+++..++++.                      ..+.+..++.++.|++.||.|||+.+   |+||||||+|||++
T Consensus        92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~Nill~  168 (334)
T cd05100          92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK---CIHRDLAARNVLVT  168 (334)
T ss_pred             ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccceEEEc
Confidence            122233333333322                      23678888999999999999999988   99999999999999


Q ss_pred             CCCcEEEEecCcchhccc------------------cc----------------------------c-------------
Q 006915          525 QEMNPKISDFGLALDMMD------------------QK----------------------------L-------------  545 (626)
Q Consensus       525 ~~~~~kl~DFGla~~~~~------------------~~----------------------------~-------------  545 (626)
                      .++.+||+|||+++.+.+                  +.                            .             
T Consensus       169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~  248 (334)
T cd05100         169 EDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKL  248 (334)
T ss_pred             CCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence            999999999998732110                  00                            0             


Q ss_pred             -----CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 006915          546 -----HASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEA  586 (626)
Q Consensus       546 -----~~~~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~  586 (626)
                           ....+......+.+++..|++.+|.+||++.+++..|..+.
T Consensus       249 ~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~  294 (334)
T cd05100         249 LKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVL  294 (334)
T ss_pred             HHcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHh
Confidence                 00000111235667888999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.80  E-value=2.4e-19  Score=178.47  Aligned_cols=170  Identities=25%  Similarity=0.324  Sum_probs=124.5

Q ss_pred             ccccccCeEEEEEEEcCCCcEEEEEEecCCCc-ccHHHHHHHHH------hccccceecchHH--HHHHhhccccCCCcc
Q 006915          411 NKLGKGGFGPVYKAKFPGGQQIAVKRLSSASG-QGLEEFKNEIE------TSNSNATIGANVK--AFVREMKTFSDPTLS  481 (626)
Q Consensus       411 ~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~-~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~~~~~~~~l~  481 (626)
                      +.||+|+||.||+|...++..+|+|.+..... .....|.+|++      +++++.+.+.+..  ..+..++++.++++.
T Consensus         1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   80 (250)
T cd05085           1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL   80 (250)
T ss_pred             CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence            36999999999999988889999999875432 22335666654      4666766654433  233445555555433


Q ss_pred             -------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhc--------------
Q 006915          482 -------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM--------------  540 (626)
Q Consensus       482 -------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~--------------  540 (626)
                             ..+++..++.++.|++.||.|||+.+   ++||||||+||+++.++.+||+|||++...              
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~  157 (250)
T cd05085          81 SFLRKKKDELKTKQLVKFALDAAAGMAYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIP  157 (250)
T ss_pred             HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCc
Confidence                   23678899999999999999999988   999999999999999999999999987211              


Q ss_pred             ---cccc----------------------------cC------------------CCCChHHHHHHHHHHHHhcccCCCC
Q 006915          541 ---MDQK----------------------------LH------------------ASSKPNEILKCINVGLLCVQEDPND  571 (626)
Q Consensus       541 ---~~~~----------------------------~~------------------~~~~~~~~~~~~~~~~~C~~~~p~~  571 (626)
                         ..++                            .+                  ...+......+.+++..|++.+|++
T Consensus       158 ~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~  237 (250)
T cd05085         158 IKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYRMSCPQKCPDDVYKVMQRCWDYKPEN  237 (250)
T ss_pred             ccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCccc
Confidence               0000                            00                  0001112356778889999999999


Q ss_pred             CCCHHHHHHHhc
Q 006915          572 RPTMSDVVIMLG  583 (626)
Q Consensus       572 RPs~~~vl~~L~  583 (626)
                      ||++.++++.|.
T Consensus       238 Rp~~~~l~~~l~  249 (250)
T cd05085         238 RPKFSELQKELA  249 (250)
T ss_pred             CCCHHHHHHHhc
Confidence            999999999875

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.80  E-value=2.5e-19  Score=180.11  Aligned_cols=178  Identities=22%  Similarity=0.333  Sum_probs=127.9

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCC---CcccHHHHHHHHHh------ccccceecchHH--HHHHhh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSA---SGQGLEEFKNEIET------SNSNATIGANVK--AFVREM  472 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~---~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~  472 (626)
                      ++|++.+.||+|+||.||+|... +++.||+|.++..   .....+.+.+|++.      .+++...+....  .+...+
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~   81 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL   81 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence            57888999999999999999986 7899999988632   22234566666654      455555443322  122334


Q ss_pred             ccccCCCcc----------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhccc
Q 006915          473 KTFSDPTLS----------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD  542 (626)
Q Consensus       473 ~~~~~~~l~----------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~  542 (626)
                      +++.++++.          ..+++.+++.++.+++.||.|||+.+   |+|+||||+||+++.++.++|+|||++..+..
T Consensus        82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~  158 (267)
T cd08224          82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR---IMHRDIKPANVFITATGVVKLGDLGLGRFFSS  158 (267)
T ss_pred             ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence            445444442          23678888999999999999999988   99999999999999999999999998621100


Q ss_pred             ----------------cc---------------------------cC--------------------CCCCh-HHHHHHH
Q 006915          543 ----------------QK---------------------------LH--------------------ASSKP-NEILKCI  558 (626)
Q Consensus       543 ----------------~~---------------------------~~--------------------~~~~~-~~~~~~~  558 (626)
                                      +.                           ..                    ...+. .....+.
T Consensus       159 ~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (267)
T cd08224         159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPPLPADHYSEELR  238 (267)
T ss_pred             CCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCCCCCChhhcCHHHH
Confidence                            00                           00                    00000 1223567


Q ss_pred             HHHHHhcccCCCCCCCHHHHHHHhccc
Q 006915          559 NVGLLCVQEDPNDRPTMSDVVIMLGSE  585 (626)
Q Consensus       559 ~~~~~C~~~~p~~RPs~~~vl~~L~~~  585 (626)
                      +++..|++.+|.+||++.+++++|..+
T Consensus       239 ~~i~~cl~~~p~~Rp~~~~il~~~~~~  265 (267)
T cd08224         239 DLVSRCINPDPEKRPDISYVLQVAKEM  265 (267)
T ss_pred             HHHHHHcCCCcccCCCHHHHHHHHHHh
Confidence            788899999999999999999999764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.80  E-value=2.4e-19  Score=180.32  Aligned_cols=178  Identities=20%  Similarity=0.311  Sum_probs=125.4

Q ss_pred             cCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCC---cccHHHHHHHHHh------ccccceecchHH--HHHHhh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSAS---GQGLEEFKNEIET------SNSNATIGANVK--AFVREM  472 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~---~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~  472 (626)
                      ++|++.+.||+|+||.||+++. .+++.+|||.+....   .....++.+|+..      ++++.+.+....  .+...+
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL   81 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence            4677889999999999999986 478999999886422   2233456666554      455554443322  112233


Q ss_pred             ccccCCCcc----------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhcc-
Q 006915          473 KTFSDPTLS----------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMM-  541 (626)
Q Consensus       473 ~~~~~~~l~----------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~-  541 (626)
                      ++..++++.          ..+++.....++.||+.||.|||+.+   ++|+||||+||+++.++.++|+|||++..+. 
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~  158 (267)
T cd08229          82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS  158 (267)
T ss_pred             EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence            444443332          34678889999999999999999998   9999999999999999999999999762110 


Q ss_pred             ---------------ccc---------------------------cCC--------------------CC-ChHHHHHHH
Q 006915          542 ---------------DQK---------------------------LHA--------------------SS-KPNEILKCI  558 (626)
Q Consensus       542 ---------------~~~---------------------------~~~--------------------~~-~~~~~~~~~  558 (626)
                                     .++                           .+.                    .. .......+.
T Consensus       159 ~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (267)
T cd08229         159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELR  238 (267)
T ss_pred             CCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCCCCCCCcccccHHHH
Confidence                           000                           000                    00 001224577


Q ss_pred             HHHHHhcccCCCCCCCHHHHHHHhccc
Q 006915          559 NVGLLCVQEDPNDRPTMSDVVIMLGSE  585 (626)
Q Consensus       559 ~~~~~C~~~~p~~RPs~~~vl~~L~~~  585 (626)
                      +++..|++.+|.+||+|.+|++++..+
T Consensus       239 ~li~~~l~~~p~~Rpt~~~i~~~~~~~  265 (267)
T cd08229         239 QLVNMCINPDPEKRPDITYVYDVAKRM  265 (267)
T ss_pred             HHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence            788899999999999999999988754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.80  E-value=1.5e-19  Score=184.20  Aligned_cols=128  Identities=27%  Similarity=0.430  Sum_probs=94.7

Q ss_pred             CccccccccccCeEEEEEEEcC--CCcEEEEEEecCCC--cccHHHHHHHH---------HhccccceecchHH------
Q 006915          406 NFSEANKLGKGGFGPVYKAKFP--GGQQIAVKRLSSAS--GQGLEEFKNEI---------ETSNSNATIGANVK------  466 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~--~~~~vAvK~l~~~~--~~~~~~~~~e~---------~~~~~~~~~~~~~~------  466 (626)
                      +|.+.+.||+|+||.||+|+..  +++.||||.++...  ......+.+|+         .++|++++.+.+..      
T Consensus         2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~   81 (290)
T cd07862           2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE   81 (290)
T ss_pred             CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence            6888899999999999999863  46889999987432  11222333333         25777777664421      


Q ss_pred             -HHHHhhccccCCCc--------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          467 -AFVREMKTFSDPTL--------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       467 -~~~~~~~~~~~~~l--------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                       .++.+++++. +++        ...+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus        82 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~---iiH~dlkp~Nil~~~~~~~kl~Dfg~~  157 (290)
T cd07862          82 TKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLA  157 (290)
T ss_pred             CcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEcCCCCEEEccccce
Confidence             1223333332 222        223678899999999999999999998   999999999999999999999999987

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.80  E-value=1.1e-19  Score=189.31  Aligned_cols=130  Identities=25%  Similarity=0.339  Sum_probs=101.3

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHHHHh------ccccceecchHH--HHHHhh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNEIET------SNSNATIGANVK--AFVREM  472 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~  472 (626)
                      ++|++.+.||+|+||.||+|+.. +++.||||+++...   ......+.+|++.      ++++++.+....  .++.++
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~   80 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM   80 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence            46888999999999999999985 48899999997532   1233455566543      666666544322  233456


Q ss_pred             ccccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          473 KTFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       473 ~~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +++.++++..      .+++.....++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus        81 e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kL~Dfg~a  148 (333)
T cd05600          81 EYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELG---YIHRDLKPENFLIDASGHIKLTDFGLS  148 (333)
T ss_pred             eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEEEeCcCC
Confidence            6666666544      3577888899999999999999998   999999999999999999999999988

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.80  E-value=2.1e-19  Score=184.49  Aligned_cols=178  Identities=24%  Similarity=0.395  Sum_probs=126.3

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCc----EEEEEEecCCCc-ccHHHHHHHHH------hccccceecchHH-HHHHh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQ----QIAVKRLSSASG-QGLEEFKNEIE------TSNSNATIGANVK-AFVRE  471 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~----~vAvK~l~~~~~-~~~~~~~~e~~------~~~~~~~~~~~~~-~~~~~  471 (626)
                      ++|+..+.||+|+||.||+|... ++.    .||+|.+..... ....++.+|+.      ++|++++++.+.. .....
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~v   86 (303)
T cd05110           7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQLV   86 (303)
T ss_pred             hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCCCceee
Confidence            45777889999999999999863 343    579998875432 22234555544      5788888776543 12233


Q ss_pred             hccccCCCccc-------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhccc--
Q 006915          472 MKTFSDPTLSA-------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD--  542 (626)
Q Consensus       472 ~~~~~~~~l~~-------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~--  542 (626)
                      +++...+++..       .+++..++.++.|++.||+|||+.+   |+||||||+|||+++++.+||+|||++..+..  
T Consensus        87 ~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~  163 (303)
T cd05110          87 TQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDE  163 (303)
T ss_pred             ehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcC---eeccccccceeeecCCCceEEccccccccccCcc
Confidence            44444444332       3567888999999999999999987   99999999999999999999999998832110  


Q ss_pred             ----------------cc----------------------------cC-CCCChH-----------------HHHHHHHH
Q 006915          543 ----------------QK----------------------------LH-ASSKPN-----------------EILKCINV  560 (626)
Q Consensus       543 ----------------~~----------------------------~~-~~~~~~-----------------~~~~~~~~  560 (626)
                                      +.                            .. ......                 ....+..+
T Consensus       164 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  243 (303)
T cd05110         164 KEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQPPICTIDVYMV  243 (303)
T ss_pred             cccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHH
Confidence                            00                            00 000001                 12345677


Q ss_pred             HHHhcccCCCCCCCHHHHHHHhccc
Q 006915          561 GLLCVQEDPNDRPTMSDVVIMLGSE  585 (626)
Q Consensus       561 ~~~C~~~~p~~RPs~~~vl~~L~~~  585 (626)
                      +..||..+|++||++.++++.|...
T Consensus       244 i~~c~~~~p~~Rp~~~~l~~~l~~~  268 (303)
T cd05110         244 MVKCWMIDADSRPKFKELAAEFSRM  268 (303)
T ss_pred             HHHHcCCChhhCcCHHHHHHHHHHH
Confidence            8899999999999999999998875

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.80  E-value=2.3e-19  Score=186.65  Aligned_cols=132  Identities=27%  Similarity=0.379  Sum_probs=102.4

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC-cccHHHHHHHHHh------ccccceecchHH--HHHHhhc
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS-GQGLEEFKNEIET------SNSNATIGANVK--AFVREMK  473 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~  473 (626)
                      .++|++.+.||+|+||.||+++.. ++..||+|.+.... ......+.+|++.      ++++++.+....  .++.+++
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (331)
T cd06649           4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (331)
T ss_pred             cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence            367889999999999999999885 58899999987532 2234456666554      677777654332  2334566


Q ss_pred             cccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          474 TFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       474 ~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++.++++..      .+++.....++.|++.||.|||+.+  .|+||||||+|||++.++.+||+|||++
T Consensus        84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~  151 (331)
T cd06649          84 HMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVS  151 (331)
T ss_pred             cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCccc
Confidence            666666543      3567788899999999999999853  3999999999999999999999999987

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.79  E-value=2.4e-19  Score=179.54  Aligned_cols=171  Identities=24%  Similarity=0.303  Sum_probs=123.3

Q ss_pred             cccccCeEEEEEEEcC---CCcEEEEEEecCCCc-ccHHHHHHHHH------hccccceecchHH-HHHHhhccccCCCc
Q 006915          412 KLGKGGFGPVYKAKFP---GGQQIAVKRLSSASG-QGLEEFKNEIE------TSNSNATIGANVK-AFVREMKTFSDPTL  480 (626)
Q Consensus       412 ~lG~G~fG~Vy~~~~~---~~~~vAvK~l~~~~~-~~~~~~~~e~~------~~~~~~~~~~~~~-~~~~~~~~~~~~~l  480 (626)
                      .||+|+||.||+|.+.   .+..||||.+..... ...++|.+|+.      +++++++++.+.. .++.++++..++++
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~lv~e~~~~~~L   81 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEAEALMLVMEMASGGPL   81 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcCCCeEEEEEeCCCCCH
Confidence            4899999999999763   356799999875432 23345666654      4677777765433 23345555555544


Q ss_pred             cc-------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhccc-----------
Q 006915          481 SA-------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD-----------  542 (626)
Q Consensus       481 ~~-------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~-----------  542 (626)
                      ..       .+++..+++++.|++.||.|||+.+   ++||||||+|||++.++.+||+|||++..+..           
T Consensus        82 ~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~  158 (257)
T cd05115          82 NKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKN---FVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAG  158 (257)
T ss_pred             HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcC---eeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCC
Confidence            32       4678889999999999999999987   99999999999999999999999998732110           


Q ss_pred             --------ccc-----------------------C-CCC----------------------ChHHHHHHHHHHHHhcccC
Q 006915          543 --------QKL-----------------------H-ASS----------------------KPNEILKCINVGLLCVQED  568 (626)
Q Consensus       543 --------~~~-----------------------~-~~~----------------------~~~~~~~~~~~~~~C~~~~  568 (626)
                              ++.                       . ...                      +......+.+++..||+.+
T Consensus       159 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~  238 (257)
T cd05115         159 KWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKRLDCPAECPPEMYALMKDCWIYK  238 (257)
T ss_pred             CCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCC
Confidence                    000                       0 000                      0011235667888999999


Q ss_pred             CCCCCCHHHHHHHhccc
Q 006915          569 PNDRPTMSDVVIMLGSE  585 (626)
Q Consensus       569 p~~RPs~~~vl~~L~~~  585 (626)
                      |++||++.++.+.|+..
T Consensus       239 ~~~Rp~~~~i~~~l~~~  255 (257)
T cd05115         239 WEDRPNFAKVEERMRTY  255 (257)
T ss_pred             hhhCcCHHHHHHHHhhh
Confidence            99999999999998764

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.79  E-value=2e-19  Score=179.66  Aligned_cols=174  Identities=24%  Similarity=0.387  Sum_probs=126.1

Q ss_pred             cCccccccccccCeEEEEEEEcCCCcEEEEEEecCCCcccHHHHHHHHH------hccccceecchHH-HHHHhhccccC
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIE------TSNSNATIGANVK-AFVREMKTFSD  477 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~e~~------~~~~~~~~~~~~~-~~~~~~~~~~~  477 (626)
                      ++|.+.+.||+|+||.||+|.. .++.||+|.++...  ....+.+|+.      +++++.+.+.... .++..+++..+
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~v~e~~~~   82 (254)
T cd05083           6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHNGLYIVMELMSK   82 (254)
T ss_pred             HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCCCcEEEEECCCC
Confidence            4578889999999999999975 67889999987532  2345555544      3666666654433 22344555555


Q ss_pred             CCccc--------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhc---------
Q 006915          478 PTLSA--------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM---------  540 (626)
Q Consensus       478 ~~l~~--------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~---------  540 (626)
                      +++..        .+++..++.++.|++.||.|||+.+   ++||||||+|||++.++.+||+|||++...         
T Consensus        83 ~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~  159 (254)
T cd05083          83 GNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKK---LVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKL  159 (254)
T ss_pred             CCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCcEEECCCccceeccccCCCCCC
Confidence            55432        3678888999999999999999987   999999999999999999999999987210         


Q ss_pred             -------------------------------cc-cccCC------------------CCChHHHHHHHHHHHHhcccCCC
Q 006915          541 -------------------------------MD-QKLHA------------------SSKPNEILKCINVGLLCVQEDPN  570 (626)
Q Consensus       541 -------------------------------~~-~~~~~------------------~~~~~~~~~~~~~~~~C~~~~p~  570 (626)
                                                     +. .....                  ..+......+.+++..|++.+|.
T Consensus       160 ~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  239 (254)
T cd05083         160 PVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGYRMEPPEGCPADVYVLMTSCWETEPK  239 (254)
T ss_pred             CceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCCCCCCCCcCCHHHHHHHHHHcCCChh
Confidence                                           00 00000                  00011124567788899999999


Q ss_pred             CCCCHHHHHHHhcc
Q 006915          571 DRPTMSDVVIMLGS  584 (626)
Q Consensus       571 ~RPs~~~vl~~L~~  584 (626)
                      +||++.+++..|+.
T Consensus       240 ~Rp~~~~l~~~l~~  253 (254)
T cd05083         240 KRPSFHKLREKLEK  253 (254)
T ss_pred             hCcCHHHHHHHHcc
Confidence            99999999998864

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.79  E-value=2.1e-19  Score=184.49  Aligned_cols=179  Identities=28%  Similarity=0.425  Sum_probs=128.9

Q ss_pred             hcCccccccccccCeEEEEEEEc------CCCcEEEEEEecCCC-cccHHHHHHHHH-------hccccceecchHH--H
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKF------PGGQQIAVKRLSSAS-GQGLEEFKNEIE-------TSNSNATIGANVK--A  467 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~------~~~~~vAvK~l~~~~-~~~~~~~~~e~~-------~~~~~~~~~~~~~--~  467 (626)
                      .++|...+.||+|+||.||++..      ..+..||||.++... ....+.+.+|++       +++++++.+.+..  .
T Consensus        34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~  113 (302)
T cd05055          34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGP  113 (302)
T ss_pred             HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCc
Confidence            34688889999999999999974      135689999987543 223345666644       4677777655432  2


Q ss_pred             HHHhhccccCCCcc--------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchh
Q 006915          468 FVREMKTFSDPTLS--------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALD  539 (626)
Q Consensus       468 ~~~~~~~~~~~~l~--------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~  539 (626)
                      ++..++++.++++.        ..+++.++..++.|++.||+|||+.+   |+|+||||+|||++.++.+||+|||++..
T Consensus       114 ~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~dfg~~~~  190 (302)
T cd05055         114 ILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNVLLTHGKIVKICDFGLARD  190 (302)
T ss_pred             eEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eehhhhccceEEEcCCCeEEECCCccccc
Confidence            33445555555442        22788999999999999999999987   99999999999999999999999998832


Q ss_pred             ccc------------------cc-----------------------cC-CCCC-----------------------hHHH
Q 006915          540 MMD------------------QK-----------------------LH-ASSK-----------------------PNEI  554 (626)
Q Consensus       540 ~~~------------------~~-----------------------~~-~~~~-----------------------~~~~  554 (626)
                      +..                  +.                       +. ...+                       ....
T Consensus       191 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (302)
T cd05055         191 IMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRMAQPEHAP  270 (302)
T ss_pred             ccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCcCCCCCCCC
Confidence            211                  00                       00 0000                       0112


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 006915          555 LKCINVGLLCVQEDPNDRPTMSDVVIMLGSE  585 (626)
Q Consensus       555 ~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~  585 (626)
                      ..+.+++..|++.+|++||++.++++.|+..
T Consensus       271 ~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~  301 (302)
T cd05055         271 AEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ  301 (302)
T ss_pred             HHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence            3566788899999999999999999999764

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.79  E-value=2.5e-19  Score=182.38  Aligned_cols=130  Identities=22%  Similarity=0.339  Sum_probs=97.2

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC--cccHHHHHHHHHh------ccccceecchHH--HHHHhhc
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS--GQGLEEFKNEIET------SNSNATIGANVK--AFVREMK  473 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~  473 (626)
                      ++|++.+.||+|+||.||+++.. +++.||||+++...  ....+.+.+|++.      ++++.+.+....  .++.+++
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE   80 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence            46888999999999999999985 58899999987432  2233455566554      555554433221  1223444


Q ss_pred             cccCCCc------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          474 TFSDPTL------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       474 ~~~~~~l------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++.++.+      ...+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nill~~~~~~kl~Dfg~~  147 (287)
T cd07848          81 YVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKND---IVHRDIKPENLLISHNDVLKLCDFGFA  147 (287)
T ss_pred             cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccCc
Confidence            4443322      234678888999999999999999987   999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.79  E-value=2.2e-19  Score=180.99  Aligned_cols=177  Identities=25%  Similarity=0.345  Sum_probs=127.7

Q ss_pred             CccccccccccCeEEEEEEEcCC-C---cEEEEEEecCC-CcccHHHHHHHHH------hccccceecchHH--HHHHhh
Q 006915          406 NFSEANKLGKGGFGPVYKAKFPG-G---QQIAVKRLSSA-SGQGLEEFKNEIE------TSNSNATIGANVK--AFVREM  472 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~~-~---~~vAvK~l~~~-~~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~  472 (626)
                      .|++.+.||+|+||.||+|.+.. +   ..||||.+... ......+|..|+.      ++|++++.+....  .++..+
T Consensus         5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~   84 (269)
T cd05065           5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIIT   84 (269)
T ss_pred             HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEE
Confidence            46778999999999999998743 3   36999998754 2334456777655      4677776654433  233445


Q ss_pred             ccccCCCcc-------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhcc----
Q 006915          473 KTFSDPTLS-------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMM----  541 (626)
Q Consensus       473 ~~~~~~~l~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~----  541 (626)
                      +++.++++.       ..+++.+++.++.|++.||.|||+.+   ++|+||||+|||++.++.+||+|||++..+.    
T Consensus        85 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g---~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~  161 (269)
T cd05065          85 EFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTS  161 (269)
T ss_pred             ecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccChheEEEcCCCcEEECCCccccccccCcc
Confidence            555555443       23678889999999999999999987   9999999999999999999999999762110    


Q ss_pred             -----------------cccc-----------------------C-CCC----------------------ChHHHHHHH
Q 006915          542 -----------------DQKL-----------------------H-ASS----------------------KPNEILKCI  558 (626)
Q Consensus       542 -----------------~~~~-----------------------~-~~~----------------------~~~~~~~~~  558 (626)
                                       .+..                       . ...                      +......+.
T Consensus       162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  241 (269)
T cd05065         162 DPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDYRLPPPMDCPTALH  241 (269)
T ss_pred             ccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCcCCCcccCCHHHH
Confidence                             0000                       0 000                      011123466


Q ss_pred             HHHHHhcccCCCCCCCHHHHHHHhccc
Q 006915          559 NVGLLCVQEDPNDRPTMSDVVIMLGSE  585 (626)
Q Consensus       559 ~~~~~C~~~~p~~RPs~~~vl~~L~~~  585 (626)
                      +++..||+.+|.+||++.+++.+|+..
T Consensus       242 ~li~~~l~~~p~~Rp~~~~i~~~l~~~  268 (269)
T cd05065         242 QLMLDCWQKDRNARPKFGQIVSTLDKM  268 (269)
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            788899999999999999999998764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.79  E-value=2.6e-19  Score=180.22  Aligned_cols=178  Identities=25%  Similarity=0.357  Sum_probs=128.7

Q ss_pred             cCccccccccccCeEEEEEEEcC----CCcEEEEEEecCCC-cccHHHHHHHHH------hccccceecchHH--HHHHh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP----GGQQIAVKRLSSAS-GQGLEEFKNEIE------TSNSNATIGANVK--AFVRE  471 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~----~~~~vAvK~l~~~~-~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~  471 (626)
                      .+|++.+.||+|+||.||+|+..    .+..+|+|.++... ......|.+|+.      +++++++.+....  .++..
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   83 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV   83 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence            46778899999999999999863    23479999987532 233456666654      4777777665432  23344


Q ss_pred             hccccCCCccc-------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhccc--
Q 006915          472 MKTFSDPTLSA-------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD--  542 (626)
Q Consensus       472 ~~~~~~~~l~~-------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~--  542 (626)
                      +++..++++..       .+++.+.+.++.|++.||.|||+.+   ++||||||+|||++.++.+||+|||++..+..  
T Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~  160 (267)
T cd05066          84 TEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP  160 (267)
T ss_pred             EEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeehhhchhcEEECCCCeEEeCCCCccccccccc
Confidence            56555555432       3678888999999999999999988   99999999999999999999999998721110  


Q ss_pred             -----------------ccc-----------------------C-CCC----------------------ChHHHHHHHH
Q 006915          543 -----------------QKL-----------------------H-ASS----------------------KPNEILKCIN  559 (626)
Q Consensus       543 -----------------~~~-----------------------~-~~~----------------------~~~~~~~~~~  559 (626)
                                       +..                       . +..                      .......+.+
T Consensus       161 ~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (267)
T cd05066         161 EAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYRLPAPMDCPAALHQ  240 (267)
T ss_pred             ceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCCcCCCCCCCCHHHHH
Confidence                             000                       0 000                      0011235678


Q ss_pred             HHHHhcccCCCCCCCHHHHHHHhccc
Q 006915          560 VGLLCVQEDPNDRPTMSDVVIMLGSE  585 (626)
Q Consensus       560 ~~~~C~~~~p~~RPs~~~vl~~L~~~  585 (626)
                      ++..|++.+|.+||+|.++++.|...
T Consensus       241 li~~~l~~~p~~Rp~~~~i~~~l~~~  266 (267)
T cd05066         241 LMLDCWQKDRNERPKFEQIVSILDKL  266 (267)
T ss_pred             HHHHHcccCchhCCCHHHHHHHHHhh
Confidence            88899999999999999999998764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.79  E-value=2.9e-19  Score=180.40  Aligned_cols=176  Identities=28%  Similarity=0.424  Sum_probs=124.0

Q ss_pred             ccccccccccCeEEEEEEEcC----CCcEEEEEEecCC--CcccHHHHHHHHH------hccccceecchHHH-------
Q 006915          407 FSEANKLGKGGFGPVYKAKFP----GGQQIAVKRLSSA--SGQGLEEFKNEIE------TSNSNATIGANVKA-------  467 (626)
Q Consensus       407 f~~~~~lG~G~fG~Vy~~~~~----~~~~vAvK~l~~~--~~~~~~~~~~e~~------~~~~~~~~~~~~~~-------  467 (626)
                      |.+.+.||+|+||.||+|.+.    .++.||||.+...  .....+++.+|+.      +++++.+.+.....       
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   80 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP   80 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence            456689999999999999863    3688999998753  2233455666654      46777776643220       


Q ss_pred             -HHHhhccccCCCcc------------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEec
Q 006915          468 -FVREMKTFSDPTLS------------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDF  534 (626)
Q Consensus       468 -~~~~~~~~~~~~l~------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DF  534 (626)
                       .+..++++..+++.            ..+++.....++.||+.||+|||+.+   |+||||||+|||++.++.+||+||
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~nili~~~~~~kl~df  157 (273)
T cd05074          81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKN---FIHRDLAARNCMLNENMTVCVADF  157 (273)
T ss_pred             ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccchhhEEEcCCCCEEECcc
Confidence             01122333333321            13677888999999999999999987   999999999999999999999999


Q ss_pred             Ccchhcccc------------------c----------------------------cC-C-----------------CCC
Q 006915          535 GLALDMMDQ------------------K----------------------------LH-A-----------------SSK  550 (626)
Q Consensus       535 Gla~~~~~~------------------~----------------------------~~-~-----------------~~~  550 (626)
                      |++..+...                  .                            .. .                 ..+
T Consensus       158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  237 (273)
T cd05074         158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNRLKQP  237 (273)
T ss_pred             cccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCCcCCCC
Confidence            987322100                  0                            00 0                 000


Q ss_pred             hHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 006915          551 PNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSE  585 (626)
Q Consensus       551 ~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~  585 (626)
                      ......+.+++..|++.+|.+||++.++++.|+.+
T Consensus       238 ~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~  272 (273)
T cd05074         238 PDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI  272 (273)
T ss_pred             CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            11224677888999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.79  E-value=3.7e-19  Score=178.29  Aligned_cols=178  Identities=27%  Similarity=0.408  Sum_probs=129.6

Q ss_pred             hhcCccccccccccCeEEEEEEEcCCCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH--HHHHhhcc
Q 006915          403 ATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK--AFVREMKT  474 (626)
Q Consensus       403 ~~~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~  474 (626)
                      ..++|.+.+.||+|+||.||+|...+++.||||.+.... ...+++.+|+..      ++++++.+....  .+...+++
T Consensus         4 ~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   82 (261)
T cd05034           4 PRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEY   82 (261)
T ss_pred             chhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEec
Confidence            346788899999999999999998878899999997533 234556666543      566666544322  22334444


Q ss_pred             ccCCCcc--------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhcc-----
Q 006915          475 FSDPTLS--------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMM-----  541 (626)
Q Consensus       475 ~~~~~l~--------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~-----  541 (626)
                      ..++++.        ..+++..+..++.+++.||.|||+.+   ++|+||||+||++++++.+||+|||++..+.     
T Consensus        83 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~  159 (261)
T cd05034          83 MSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRN---YIHRDLAARNILVGENLVCKIADFGLARLIEDDEYT  159 (261)
T ss_pred             cCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcchheEEEcCCCCEEECccccceeccchhhh
Confidence            4444432        24678889999999999999999998   9999999999999999999999999862211     


Q ss_pred             ---------------------------------------c-cccC------------------CCCChHHHHHHHHHHHH
Q 006915          542 ---------------------------------------D-QKLH------------------ASSKPNEILKCINVGLL  563 (626)
Q Consensus       542 ---------------------------------------~-~~~~------------------~~~~~~~~~~~~~~~~~  563 (626)
                                                             . ....                  ...+......+.+++..
T Consensus       160 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  239 (261)
T cd05034         160 AREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRMPRPPNCPEELYDLMLQ  239 (261)
T ss_pred             hhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHH
Confidence                                                   0 0000                  00011112457788889


Q ss_pred             hcccCCCCCCCHHHHHHHhcc
Q 006915          564 CVQEDPNDRPTMSDVVIMLGS  584 (626)
Q Consensus       564 C~~~~p~~RPs~~~vl~~L~~  584 (626)
                      |++.+|.+||++.++++.|+.
T Consensus       240 ~l~~~p~~Rp~~~~l~~~l~~  260 (261)
T cd05034         240 CWDKDPEERPTFEYLQSFLED  260 (261)
T ss_pred             HcccCcccCCCHHHHHHHHhc
Confidence            999999999999999998864

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.79  E-value=7.1e-20  Score=191.15  Aligned_cols=174  Identities=26%  Similarity=0.276  Sum_probs=132.8

Q ss_pred             cCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCC---cccHHH------HHHHHHhccccceecchH--HHHHHhh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSAS---GQGLEE------FKNEIETSNSNATIGANV--KAFVREM  472 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~---~~~~~~------~~~e~~~~~~~~~~~~~~--~~~~~~~  472 (626)
                      +-|++++.||.|+-|.|-+|++ .+|+.+|||.+.+..   ......      +++-++|+|++++++...  ..++.++
T Consensus        12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl   91 (786)
T KOG0588|consen   12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL   91 (786)
T ss_pred             cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence            3477889999999999999998 569999999997642   111222      334456688888876543  3666778


Q ss_pred             ccccCCCcccC------CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcch--------
Q 006915          473 KTFSDPTLSAL------LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLAL--------  538 (626)
Q Consensus       473 ~~~~~~~l~~~------l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~--------  538 (626)
                      ++..++.+..+      |...+..+++.||+.|+.|+|..+   |+||||||+|+|||.++++||+|||+|.        
T Consensus        92 Eyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~---icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gklL  168 (786)
T KOG0588|consen   92 EYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFN---ICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKLL  168 (786)
T ss_pred             EecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhc---ceeccCCchhhhhhcccCEeeeccceeecccCCccc
Confidence            88888877543      678888999999999999999998   9999999999999999999999999990        


Q ss_pred             -----------------------------------hccccccCC-----------------CCChHHHHHHHHHHHHhcc
Q 006915          539 -----------------------------------DMMDQKLHA-----------------SSKPNEILKCINVGLLCVQ  566 (626)
Q Consensus       539 -----------------------------------~~~~~~~~~-----------------~~~~~~~~~~~~~~~~C~~  566 (626)
                                                         .++...++-                 ..+.....++.++...++.
T Consensus       169 eTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~MPs~Is~eaQdLLr~ml~  248 (786)
T KOG0588|consen  169 ETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEMPSNISSEAQDLLRRMLD  248 (786)
T ss_pred             cccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccCCCcCCHHHHHHHHHHhc
Confidence                                               011111111                 1122233467788889999


Q ss_pred             cCCCCCCCHHHHHHH
Q 006915          567 EDPNDRPTMSDVVIM  581 (626)
Q Consensus       567 ~~p~~RPs~~~vl~~  581 (626)
                      .||+.|.|+.+|++.
T Consensus       249 VDp~~RiT~~eI~kH  263 (786)
T KOG0588|consen  249 VDPSTRITTEEILKH  263 (786)
T ss_pred             cCccccccHHHHhhC
Confidence            999999999999976

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.79  E-value=9.2e-20  Score=186.70  Aligned_cols=134  Identities=25%  Similarity=0.307  Sum_probs=106.7

Q ss_pred             HhhcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCcc---cHHHHHHH------HHhccccceecchH--HHHH
Q 006915          402 AATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQ---GLEEFKNE------IETSNSNATIGANV--KAFV  469 (626)
Q Consensus       402 ~~~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~---~~~~~~~e------~~~~~~~~~~~~~~--~~~~  469 (626)
                      ...++|+++..||+|+||+||+++-+ +|+.+|+|++++....   +.+..+.|      ...+.+|++.-...  ..++
T Consensus       138 ~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LY  217 (550)
T KOG0605|consen  138 LSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLY  217 (550)
T ss_pred             CCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeE
Confidence            35678999999999999999999875 4999999999875432   22333333      33355666553322  2566


Q ss_pred             HhhccccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcch
Q 006915          470 REMKTFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLAL  538 (626)
Q Consensus       470 ~~~~~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~  538 (626)
                      .+||++++|++..      .|+......++.+++.|++-||..|   +|||||||+|+|||..|.+||+||||+.
T Consensus       218 LiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~g---yIHRDIKPdNlLiD~~GHiKLSDFGLs~  289 (550)
T KOG0605|consen  218 LIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLG---YIHRDIKPDNLLIDAKGHIKLSDFGLST  289 (550)
T ss_pred             EEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcC---cccccCChhheeecCCCCEeeccccccc
Confidence            7899999998754      4677778889999999999999998   9999999999999999999999999993

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.79  E-value=2.3e-19  Score=176.36  Aligned_cols=186  Identities=20%  Similarity=0.336  Sum_probs=135.7

Q ss_pred             HHHHHHhhcCccccccccccCeEEEEEEEcC------CCcEEEEEEecCCCc-ccHHHHHHH------HHhccccceecc
Q 006915          397 FESILAATDNFSEANKLGKGGFGPVYKAKFP------GGQQIAVKRLSSASG-QGLEEFKNE------IETSNSNATIGA  463 (626)
Q Consensus       397 ~~~l~~~~~~f~~~~~lG~G~fG~Vy~~~~~------~~~~vAvK~l~~~~~-~~~~~~~~e------~~~~~~~~~~~~  463 (626)
                      ..++.....+++....+-+|.||.||+|.+.      +.+.|-||.++.... -+...+..|      +.|+|+..+.+.
T Consensus       276 ~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V  355 (563)
T KOG1024|consen  276 LQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGV  355 (563)
T ss_pred             HHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEE
Confidence            4566677778888899999999999999553      356788898875433 344455554      446888887776


Q ss_pred             hHHHHH-----------Hhhccc------cCCCcccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCC
Q 006915          464 NVKAFV-----------REMKTF------SDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQE  526 (626)
Q Consensus       464 ~~~~~~-----------~~~~~~------~~~~l~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~  526 (626)
                      +++..-           +.++.|      .+..-.+.+...+...++.|++.||+|||.++   |||.||.++|++||+.
T Consensus       356 ~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~---ViHkDiAaRNCvIdd~  432 (563)
T KOG1024|consen  356 SIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHG---VIHKDIAARNCVIDDQ  432 (563)
T ss_pred             EeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcC---cccchhhhhcceehhh
Confidence            655211           111111      13334445667778889999999999999998   9999999999999999


Q ss_pred             CcEEEEecCcchhccccc--------------------------------------------------------------
Q 006915          527 MNPKISDFGLALDMMDQK--------------------------------------------------------------  544 (626)
Q Consensus       527 ~~~kl~DFGla~~~~~~~--------------------------------------------------------------  544 (626)
                      .++||+|-.++++++...                                                              
T Consensus       433 LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylk  512 (563)
T KOG1024|consen  433 LQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLK  512 (563)
T ss_pred             eeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHh
Confidence            999999999884332111                                                              


Q ss_pred             --cCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 006915          545 --LHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSE  585 (626)
Q Consensus       545 --~~~~~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~  585 (626)
                        .+-..+..++.++..++..||..+|++||++++++.-|...
T Consensus       513 dGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF  555 (563)
T KOG1024|consen  513 DGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEF  555 (563)
T ss_pred             ccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHH
Confidence              11122233445788899999999999999999999988654

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.79  E-value=2.6e-19  Score=184.87  Aligned_cols=181  Identities=26%  Similarity=0.360  Sum_probs=128.5

Q ss_pred             hcCccccccccccCeEEEEEEEcC--------CCcEEEEEEecCCC-cccHHHHHHHHH-------hccccceecchHH-
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP--------GGQQIAVKRLSSAS-GQGLEEFKNEIE-------TSNSNATIGANVK-  466 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~--------~~~~vAvK~l~~~~-~~~~~~~~~e~~-------~~~~~~~~~~~~~-  466 (626)
                      .++|.+.+.||+|+||.||+++..        ....+|+|.++... .....++..|++       +++++++.+.+.. 
T Consensus        11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~   90 (314)
T cd05099          11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQE   90 (314)
T ss_pred             HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence            356788899999999999999742        24579999987532 233455666654       4667776654432 


Q ss_pred             -HHHHhhccccCCCcc----------------------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEE
Q 006915          467 -AFVREMKTFSDPTLS----------------------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILL  523 (626)
Q Consensus       467 -~~~~~~~~~~~~~l~----------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl  523 (626)
                       .++..++++.++++.                      ..+.+...++++.||+.||.|||+.+   |+||||||+|||+
T Consensus        91 ~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~Nill  167 (314)
T cd05099          91 GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR---CIHRDLAARNVLV  167 (314)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC---eeeccccceeEEE
Confidence             222333444433321                      34778889999999999999999987   9999999999999


Q ss_pred             CCCCcEEEEecCcchhccc------------------ccc-----------------------C-C--------------
Q 006915          524 DQEMNPKISDFGLALDMMD------------------QKL-----------------------H-A--------------  547 (626)
Q Consensus       524 ~~~~~~kl~DFGla~~~~~------------------~~~-----------------------~-~--------------  547 (626)
                      +.++.+||+|||+++.+..                  ++.                       . .              
T Consensus       168 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~  247 (314)
T cd05099         168 TEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFK  247 (314)
T ss_pred             cCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence            9999999999999832210                  000                       0 0              


Q ss_pred             --------CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccc
Q 006915          548 --------SSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAM  587 (626)
Q Consensus       548 --------~~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~~  587 (626)
                              ..+......+.+++..|++.+|.+||++.++++.|..+..
T Consensus       248 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~  295 (314)
T cd05099         248 LLREGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLA  295 (314)
T ss_pred             HHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence                    0000112356678889999999999999999999988743

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.79  E-value=1.8e-19  Score=193.79  Aligned_cols=130  Identities=23%  Similarity=0.287  Sum_probs=100.4

Q ss_pred             hcCccccccccccCeEEEEEEEcCC-CcEEEEEEecCCCcccHHHHHHHHHhccccceecchHH--HHHHhhccccCCCc
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFPG-GQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVK--AFVREMKTFSDPTL  480 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~~-~~~vAvK~l~~~~~~~~~~~~~e~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l  480 (626)
                      ..+|.+.+.||+|+||.||++++.. ++.||||.........+.++.+.+.++|++++++.+..  ..+..++++. +++
T Consensus       168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~-~~L  246 (461)
T PHA03211        168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWYASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR-SDL  246 (461)
T ss_pred             cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC-CCH
Confidence            4579999999999999999999854 78999997654333344456666777898888765432  1111222221 111


Q ss_pred             -------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          481 -------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       481 -------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                             ...+++.+++.|+.||+.||.|||+.+   |+||||||+||||+.++.+||+|||++
T Consensus       247 ~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDLKP~NILl~~~~~vkL~DFGla  307 (461)
T PHA03211        247 YTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEG---IIHRDIKTENVLVNGPEDICLGDFGAA  307 (461)
T ss_pred             HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EEECcCCHHHEEECCCCCEEEcccCCc
Confidence                   124789999999999999999999998   999999999999999999999999987

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.79  E-value=4.5e-19  Score=178.83  Aligned_cols=172  Identities=28%  Similarity=0.432  Sum_probs=120.9

Q ss_pred             ccccccCeEEEEEEEcCC-Cc--EEEEEEecCC-CcccHHHHHHHHH-------hccccceecchHH--HHHHhhccccC
Q 006915          411 NKLGKGGFGPVYKAKFPG-GQ--QIAVKRLSSA-SGQGLEEFKNEIE-------TSNSNATIGANVK--AFVREMKTFSD  477 (626)
Q Consensus       411 ~~lG~G~fG~Vy~~~~~~-~~--~vAvK~l~~~-~~~~~~~~~~e~~-------~~~~~~~~~~~~~--~~~~~~~~~~~  477 (626)
                      +.||+|+||.||+|+..+ +.  .+|+|.++.. .......+.+|++       +++++++.+.+..  .++..++++.+
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH   80 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence            369999999999998854 43  5789988743 2233445666654       3566666554332  22334444444


Q ss_pred             CCcc----------------------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecC
Q 006915          478 PTLS----------------------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFG  535 (626)
Q Consensus       478 ~~l~----------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFG  535 (626)
                      +++.                      ..+++.+++.++.|++.||+|||+.+   ++||||||+|||+++++.+||+|||
T Consensus        81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nili~~~~~~kl~dfg  157 (270)
T cd05047          81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFG  157 (270)
T ss_pred             CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccccceEEEcCCCeEEECCCC
Confidence            4332                      23678889999999999999999987   9999999999999999999999999


Q ss_pred             cchh---------------ccccc----------------------------cC------------------CCCChHHH
Q 006915          536 LALD---------------MMDQK----------------------------LH------------------ASSKPNEI  554 (626)
Q Consensus       536 la~~---------------~~~~~----------------------------~~------------------~~~~~~~~  554 (626)
                      ++..               +..+.                            ..                  ...+....
T Consensus       158 l~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  237 (270)
T cd05047         158 LSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCD  237 (270)
T ss_pred             CccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCCCCCCCCcCC
Confidence            8720               00000                            00                  00001112


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 006915          555 LKCINVGLLCVQEDPNDRPTMSDVVIMLGSE  585 (626)
Q Consensus       555 ~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~  585 (626)
                      ..+.+++..|++.+|.+||++.++++.|..+
T Consensus       238 ~~~~~li~~~l~~~p~~Rps~~~il~~l~~~  268 (270)
T cd05047         238 DEVYDLMRQCWREKPYERPSFAQILVSLNRM  268 (270)
T ss_pred             HHHHHHHHHHcccChhhCCCHHHHHHHHHHh
Confidence            3567888999999999999999999999765

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.79  E-value=3e-19  Score=179.13  Aligned_cols=172  Identities=26%  Similarity=0.361  Sum_probs=123.1

Q ss_pred             ccccccCeEEEEEEEcC----CCcEEEEEEecCC-CcccHHHHHHHHH------hccccceecchHH---HHHHhhcccc
Q 006915          411 NKLGKGGFGPVYKAKFP----GGQQIAVKRLSSA-SGQGLEEFKNEIE------TSNSNATIGANVK---AFVREMKTFS  476 (626)
Q Consensus       411 ~~lG~G~fG~Vy~~~~~----~~~~vAvK~l~~~-~~~~~~~~~~e~~------~~~~~~~~~~~~~---~~~~~~~~~~  476 (626)
                      +.||+|+||.||+|...    +...||||.+... .....+.+.+|+.      +++++.+.+.+..   ..+..+++..
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~   80 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK   80 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence            46999999999999863    2457999998643 2233456666654      4677777765432   2233455555


Q ss_pred             CCCcccC-------CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhccc-------
Q 006915          477 DPTLSAL-------LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD-------  542 (626)
Q Consensus       477 ~~~l~~~-------l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~-------  542 (626)
                      ++++..+       +.+..++.++.|++.||.|||+.+   ++||||||+|||+++++.+||+|||++..+.+       
T Consensus        81 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~  157 (262)
T cd05058          81 HGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKK---FVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVH  157 (262)
T ss_pred             CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCccccccccCCcceeec
Confidence            5554332       457778889999999999999987   99999999999999999999999998742211       


Q ss_pred             -------------ccc-----------------------CCCC-----------------------ChHHHHHHHHHHHH
Q 006915          543 -------------QKL-----------------------HASS-----------------------KPNEILKCINVGLL  563 (626)
Q Consensus       543 -------------~~~-----------------------~~~~-----------------------~~~~~~~~~~~~~~  563 (626)
                                   +..                       ....                       +......+.+++..
T Consensus       158 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  237 (262)
T cd05058         158 NHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGRRLLQPEYCPDPLYEVMLS  237 (262)
T ss_pred             ccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCCCCcCCHHHHHHHHH
Confidence                         000                       0000                       00012457788889


Q ss_pred             hcccCCCCCCCHHHHHHHhccc
Q 006915          564 CVQEDPNDRPTMSDVVIMLGSE  585 (626)
Q Consensus       564 C~~~~p~~RPs~~~vl~~L~~~  585 (626)
                      ||+.+|++||++.+++..|+..
T Consensus       238 cl~~~p~~Rp~~~~il~~l~~~  259 (262)
T cd05058         238 CWHPKPEMRPTFSELVSRIEQI  259 (262)
T ss_pred             HcCCChhhCCCHHHHHHHHHHH
Confidence            9999999999999999999765

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.79  E-value=4.4e-19  Score=179.32  Aligned_cols=176  Identities=25%  Similarity=0.350  Sum_probs=127.5

Q ss_pred             cCccccccccccCeEEEEEEEcC------CCcEEEEEEecCCCcc-cHHHHHHHHHh------ccccceecchHH--HHH
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP------GGQQIAVKRLSSASGQ-GLEEFKNEIET------SNSNATIGANVK--AFV  469 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~------~~~~vAvK~l~~~~~~-~~~~~~~e~~~------~~~~~~~~~~~~--~~~  469 (626)
                      ++|+..+.||+|+||.||+|+..      +.+.||+|.+...... ...++.+|++.      ++++.+.+.+..  ..+
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   84 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY   84 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence            46788899999999999999863      2467999998754333 34566666554      566666654432  233


Q ss_pred             HhhccccCCCccc---------------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEec
Q 006915          470 REMKTFSDPTLSA---------------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDF  534 (626)
Q Consensus       470 ~~~~~~~~~~l~~---------------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DF  534 (626)
                      ..+++...+++..               .+++..+..++.|++.||+|||+.+   |+||||||+|||++.++.+||+||
T Consensus        85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~~~  161 (275)
T cd05046          85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR---FVHRDLAARNCLVSSQREVKVSLL  161 (275)
T ss_pred             EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC---cccCcCccceEEEeCCCcEEEccc
Confidence            4445554444421               4788999999999999999999998   999999999999999999999999


Q ss_pred             Ccchhcc-----------------cccc----------------------------C-------------------CCCC
Q 006915          535 GLALDMM-----------------DQKL----------------------------H-------------------ASSK  550 (626)
Q Consensus       535 Gla~~~~-----------------~~~~----------------------------~-------------------~~~~  550 (626)
                      |++....                 .+..                            .                   ....
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  241 (275)
T cd05046         162 SLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLELPVP  241 (275)
T ss_pred             ccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCcCCCCC
Confidence            9872111                 0000                            0                   0001


Q ss_pred             hHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 006915          551 PNEILKCINVGLLCVQEDPNDRPTMSDVVIMLG  583 (626)
Q Consensus       551 ~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~  583 (626)
                      ......+.+++..|++.+|.+||++.+++..|.
T Consensus       242 ~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~  274 (275)
T cd05046         242 EGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG  274 (275)
T ss_pred             CCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence            112245678888999999999999999999885

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.79  E-value=2.3e-19  Score=183.07  Aligned_cols=131  Identities=25%  Similarity=0.281  Sum_probs=99.1

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHHHHh------ccccceecchHH--HHHHhh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNEIET------SNSNATIGANVK--AFVREM  472 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~  472 (626)
                      ++|++.+.||+|+||.||+|... +++.||||.+....   ....+.+.+|++.      ++++++.+....  .++.++
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   80 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM   80 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence            36888899999999999999885 58999999986432   1233456666553      444444332221  122445


Q ss_pred             ccccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcch
Q 006915          473 KTFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLAL  538 (626)
Q Consensus       473 ~~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~  538 (626)
                      +++.++++..      .+.+.....++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||++.
T Consensus        81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~NIli~~~~~~kl~Dfg~~~  149 (291)
T cd05612          81 EYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKE---IVYRDLKPENILLDKEGHIKLTDFGFAK  149 (291)
T ss_pred             eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEEecCcch
Confidence            6666666543      3677888899999999999999998   9999999999999999999999999973

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.79  E-value=5.3e-19  Score=184.01  Aligned_cols=132  Identities=26%  Similarity=0.389  Sum_probs=101.9

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC-cccHHHHHHHHHh------ccccceecchHH--HHHHhhc
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS-GQGLEEFKNEIET------SNSNATIGANVK--AFVREMK  473 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~  473 (626)
                      .++|++.+.||+|+||.||+++.. +++.+|+|.+.... ......+.+|++.      ++++.+.+.+..  .++..++
T Consensus         4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (333)
T cd06650           4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (333)
T ss_pred             hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence            367889999999999999999885 58899999987532 2233456666553      677777665433  2334566


Q ss_pred             cccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          474 TFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       474 ~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +..++++..      .+++.....++.+++.||.|||+..  +|+||||||+|||++.++.+||+|||++
T Consensus        84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~  151 (333)
T cd06650          84 HMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVS  151 (333)
T ss_pred             cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcc
Confidence            666666544      3567777899999999999999752  3999999999999999999999999987

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.79  E-value=1.8e-19  Score=182.22  Aligned_cols=169  Identities=17%  Similarity=0.238  Sum_probs=119.3

Q ss_pred             cccccCeEEEEEEEcCC-------------------------CcEEEEEEecCCCcccHHHHHHHH------Hhccccce
Q 006915          412 KLGKGGFGPVYKAKFPG-------------------------GQQIAVKRLSSASGQGLEEFKNEI------ETSNSNAT  460 (626)
Q Consensus       412 ~lG~G~fG~Vy~~~~~~-------------------------~~~vAvK~l~~~~~~~~~~~~~e~------~~~~~~~~  460 (626)
                      .||+|+||.||+|.+..                         ...||||.+.........+|.+|+      .++|++++
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~   81 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV   81 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence            69999999999997521                         235899998754333334455554      45888888


Q ss_pred             ecchHH--HHHHhhccccCCCcc-------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCC----
Q 006915          461 IGANVK--AFVREMKTFSDPTLS-------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEM----  527 (626)
Q Consensus       461 ~~~~~~--~~~~~~~~~~~~~l~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~----  527 (626)
                      .+.+..  ..+.+++++.++.+.       ..+++..++.++.||++||+|||+.+   |+||||||+|||+++.+    
T Consensus        82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~Nill~~~~~~~~  158 (274)
T cd05076          82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKN---LVHGNVCAKNILLARLGLAEG  158 (274)
T ss_pred             EEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCC---ccCCCCCcccEEEeccCcccC
Confidence            877654  333456666666542       34678889999999999999999987   99999999999997643    


Q ss_pred             ---cEEEEecCcchhcc------------ccc-----------------------------cCC-C--------------
Q 006915          528 ---NPKISDFGLALDMM------------DQK-----------------------------LHA-S--------------  548 (626)
Q Consensus       528 ---~~kl~DFGla~~~~------------~~~-----------------------------~~~-~--------------  548 (626)
                         .+||+|||++....            .+.                             ... .              
T Consensus       159 ~~~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~  238 (274)
T cd05076         159 TSPFIKLSDPGVSFTALSREERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERFYEKKH  238 (274)
T ss_pred             ccceeeecCCccccccccccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHHHHHhcc
Confidence               38999999762110            000                             000 0              


Q ss_pred             -CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 006915          549 -SKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLG  583 (626)
Q Consensus       549 -~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~  583 (626)
                       .+......+.+++..||+.+|++||++.++++.|.
T Consensus       239 ~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~  274 (274)
T cd05076         239 RLPEPSCKELATLISQCLTYEPTQRPSFRTILRDLT  274 (274)
T ss_pred             CCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence             00001134677888999999999999999998873

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.79  E-value=2.9e-19  Score=185.26  Aligned_cols=124  Identities=27%  Similarity=0.273  Sum_probs=94.4

Q ss_pred             ccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHHHH------hccccceecchHH--HHHHhhccccCC
Q 006915          411 NKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNEIE------TSNSNATIGANVK--AFVREMKTFSDP  478 (626)
Q Consensus       411 ~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~~~~~~~  478 (626)
                      +.||+|+||.||+++.. +++.||||.++...   ......+.+|+.      +++++.+.+....  .++.+++++.++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~   80 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence            36999999999999874 68999999997532   222334455544      3566665543222  233456666666


Q ss_pred             Ccc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          479 TLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       479 ~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++.      ..+++.....++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DfG~a  142 (323)
T cd05571          81 ELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCD---VVYRDLKLENLMLDKDGHIKITDFGLC  142 (323)
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEeeCCCC
Confidence            553      34678888899999999999999998   999999999999999999999999987

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.79  E-value=2e-19  Score=181.37  Aligned_cols=132  Identities=33%  Similarity=0.457  Sum_probs=101.5

Q ss_pred             HhhcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCcccHHHHHHHHH-------hccccceecchHH-------
Q 006915          402 AATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQGLEEFKNEIE-------TSNSNATIGANVK-------  466 (626)
Q Consensus       402 ~~~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~e~~-------~~~~~~~~~~~~~-------  466 (626)
                      .+++.|+..+.||+|+||.||+|... +++.||||.+.... ....++.+|+.       ++|+++..+.+..       
T Consensus         3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~   81 (272)
T cd06637           3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD   81 (272)
T ss_pred             ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence            45677888899999999999999874 58899999987543 23344555443       4677777665432       


Q ss_pred             -HHHHhhccccCCCcc--------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          467 -AFVREMKTFSDPTLS--------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       467 -~~~~~~~~~~~~~l~--------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                       .++..+++..++++.        ..+++..+..++.|++.||.|||+.+   |+|+||||+||++++++.+||+|||++
T Consensus        82 ~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~---ivh~dl~~~nili~~~~~~~l~Dfg~~  158 (272)
T cd06637          82 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVS  158 (272)
T ss_pred             cEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHEEECCCCCEEEccCCCc
Confidence             123445555444332        24678888999999999999999987   999999999999999999999999998

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.79  E-value=1.3e-19  Score=195.30  Aligned_cols=132  Identities=23%  Similarity=0.300  Sum_probs=97.4

Q ss_pred             hhcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCcc--cHHHHHHHHHhccccceecchHH----------HHH
Q 006915          403 ATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQ--GLEEFKNEIETSNSNATIGANVK----------AFV  469 (626)
Q Consensus       403 ~~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~----------~~~  469 (626)
                      ..++|.+.+.||+|+||.||+|... .++.||||++......  .+..+.+.+.++|++++.+....          .+.
T Consensus        64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~  143 (440)
T PTZ00036         64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLN  143 (440)
T ss_pred             cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCcchHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEE
Confidence            3567999999999999999999874 5889999998643221  22334555667888876553211          011


Q ss_pred             HhhccccCCC---------cccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCC-cEEEEecCcc
Q 006915          470 REMKTFSDPT---------LSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEM-NPKISDFGLA  537 (626)
Q Consensus       470 ~~~~~~~~~~---------l~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~-~~kl~DFGla  537 (626)
                      .++++.....         ....+++.....++.||+.||+|||+.+   |+||||||+||||+.++ .+||+|||+|
T Consensus       144 lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~---IiHrDLKp~NILl~~~~~~vkL~DFGla  218 (440)
T PTZ00036        144 VVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKF---ICHRDLKPQNLLIDPNTHTLKLCDFGSA  218 (440)
T ss_pred             EEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCcCHHHEEEcCCCCceeeeccccc
Confidence            2344433211         1234678888899999999999999998   99999999999998664 6999999998

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.79  E-value=6.5e-19  Score=176.22  Aligned_cols=172  Identities=26%  Similarity=0.336  Sum_probs=123.8

Q ss_pred             ccccccCeEEEEEEEcCC----CcEEEEEEecCCCc-ccHHHHHHHHH------hccccceecchHH-HHHHhhccccCC
Q 006915          411 NKLGKGGFGPVYKAKFPG----GQQIAVKRLSSASG-QGLEEFKNEIE------TSNSNATIGANVK-AFVREMKTFSDP  478 (626)
Q Consensus       411 ~~lG~G~fG~Vy~~~~~~----~~~vAvK~l~~~~~-~~~~~~~~e~~------~~~~~~~~~~~~~-~~~~~~~~~~~~  478 (626)
                      ++||+|+||.||+|.+..    +..+|+|.+..... ...+++.+|+.      +++++.+.+.+.. .++..+++..++
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~   80 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKGEPLMLVMELAPLG   80 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcCCceEEEEEeCCCC
Confidence            479999999999997632    36899999985443 23455666654      3666666654432 223344555555


Q ss_pred             Cccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhcc-----------
Q 006915          479 TLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMM-----------  541 (626)
Q Consensus       479 ~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~-----------  541 (626)
                      ++..      .+++..++.++.|++.||+|||+.+   ++|+||||+|||++.++.+||+|||++..+.           
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~  157 (257)
T cd05060          81 PLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKH---FVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTA  157 (257)
T ss_pred             cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcC---eeccCcccceEEEcCCCcEEeccccccceeecCCcccccccC
Confidence            4432      3678899999999999999999987   9999999999999999999999999872110           


Q ss_pred             --------ccc----------------------------cCC------------------CCChHHHHHHHHHHHHhccc
Q 006915          542 --------DQK----------------------------LHA------------------SSKPNEILKCINVGLLCVQE  567 (626)
Q Consensus       542 --------~~~----------------------------~~~------------------~~~~~~~~~~~~~~~~C~~~  567 (626)
                              .+.                            ...                  ..+......+.+++..|++.
T Consensus       158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~  237 (257)
T cd05060         158 GRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGERLPRPEECPQEIYSIMLSCWKY  237 (257)
T ss_pred             ccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhcC
Confidence                    000                            000                  00011124567888999999


Q ss_pred             CCCCCCCHHHHHHHhccc
Q 006915          568 DPNDRPTMSDVVIMLGSE  585 (626)
Q Consensus       568 ~p~~RPs~~~vl~~L~~~  585 (626)
                      +|.+||++.++++.|...
T Consensus       238 ~p~~Rp~~~~l~~~l~~~  255 (257)
T cd05060         238 RPEDRPTFSELESTFRRD  255 (257)
T ss_pred             ChhhCcCHHHHHHHHHhc
Confidence            999999999999999765

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.79  E-value=2.6e-19  Score=180.10  Aligned_cols=131  Identities=29%  Similarity=0.420  Sum_probs=100.6

Q ss_pred             hcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCCcccHHHHHHHHH------hccccceecchHH--HHHHhhcc
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQGLEEFKNEIE------TSNSNATIGANVK--AFVREMKT  474 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~~~  474 (626)
                      .++|++.+.||+|+||.||+|+. .+++.||+|++..........+.+|+.      +++++.+.+.+..  .++.++++
T Consensus         8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~   87 (267)
T cd06646           8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY   87 (267)
T ss_pred             hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence            34688889999999999999987 468899999997544344444555544      3566666554332  22234555


Q ss_pred             ccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          475 FSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       475 ~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +.++++..      .+++..+..++.|++.||.|||+.+   |+||||||+||++++++.+||+|||++
T Consensus        88 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~  153 (267)
T cd06646          88 CGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKG---KMHRDIKGANILLTDNGDVKLADFGVA  153 (267)
T ss_pred             CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEECcCccc
Confidence            55555533      3677888999999999999999987   999999999999999999999999987

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.78  E-value=5.2e-19  Score=177.27  Aligned_cols=177  Identities=25%  Similarity=0.381  Sum_probs=127.9

Q ss_pred             hcCccccccccccCeEEEEEEEcCCCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH-HHHHhhcccc
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK-AFVREMKTFS  476 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~-~~~~~~~~~~  476 (626)
                      .++|.+.+.||+|+||.||++...++..+|+|.+.... ...+.|.+|+..      .+++++.+.... .++..+++..
T Consensus         5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~v~e~~~   83 (260)
T cd05073           5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMA   83 (260)
T ss_pred             ccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcCCCeEEEEEeCC
Confidence            45788889999999999999998778889999987532 234556666553      556655544322 2233445555


Q ss_pred             CCCccc--------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhccc------
Q 006915          477 DPTLSA--------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD------  542 (626)
Q Consensus       477 ~~~l~~--------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~------  542 (626)
                      ++++.+        .+++..++.++.|++.||.|||+.+   ++|+||||+||+++.++.+||+|||++..+.+      
T Consensus        84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~  160 (260)
T cd05073          84 KGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAR  160 (260)
T ss_pred             CCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCCcceeeccCCCcccc
Confidence            555432        3567888999999999999999987   99999999999999999999999997621110      


Q ss_pred             ---------------------------------------cccCC------------------CCChHHHHHHHHHHHHhc
Q 006915          543 ---------------------------------------QKLHA------------------SSKPNEILKCINVGLLCV  565 (626)
Q Consensus       543 ---------------------------------------~~~~~------------------~~~~~~~~~~~~~~~~C~  565 (626)
                                                             .....                  .........+.+++..|+
T Consensus       161 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l  240 (260)
T cd05073         161 EGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCW  240 (260)
T ss_pred             cCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCCCCcccCCHHHHHHHHHHc
Confidence                                                   00000                  000011235677888999


Q ss_pred             ccCCCCCCCHHHHHHHhcc
Q 006915          566 QEDPNDRPTMSDVVIMLGS  584 (626)
Q Consensus       566 ~~~p~~RPs~~~vl~~L~~  584 (626)
                      +.+|.+||++.+++..|..
T Consensus       241 ~~~p~~Rp~~~~l~~~L~~  259 (260)
T cd05073         241 KNRPEERPTFEYIQSVLDD  259 (260)
T ss_pred             ccCcccCcCHHHHHHHHhc
Confidence            9999999999999999864

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.78  E-value=1.3e-19  Score=185.61  Aligned_cols=133  Identities=28%  Similarity=0.407  Sum_probs=98.2

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC--cccHHHHHHHHH------hccccceecchHH--HHHHhhc
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS--GQGLEEFKNEIE------TSNSNATIGANVK--AFVREMK  473 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~~  473 (626)
                      ++|.+.+.||+|+||.||||+.+ +.+.||+|.+.+..  ...++.+++|++      |+|++.++...-.  .++.+.+
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte   81 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE   81 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence            56788899999999999999875 58899999997543  333445555554      4565554432111  1112222


Q ss_pred             cccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhcc
Q 006915          474 TFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMM  541 (626)
Q Consensus       474 ~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~  541 (626)
                      +..+ ++.      .-|++.....|+.++..||.|||+..   |+|||+||+||||+..+.+|++|||+|+.+-
T Consensus        82 ~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~r---ilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~  151 (808)
T KOG0597|consen   82 YAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNR---ILHRDMKPQNILLEKGGTLKLCDFGLARAMS  151 (808)
T ss_pred             hhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcC---cccccCCcceeeecCCCceeechhhhhhhcc
Confidence            2222 332      34778899999999999999999997   9999999999999999999999999996553

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.78  E-value=3.6e-19  Score=179.28  Aligned_cols=134  Identities=32%  Similarity=0.429  Sum_probs=101.0

Q ss_pred             HHhhcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH--HHHHh
Q 006915          401 LAATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK--AFVRE  471 (626)
Q Consensus       401 ~~~~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~  471 (626)
                      +.+++++.....||+|+||.||+|+.. ++..||+|.+........+.+.+|++.      ++++.+++.+..  .++..
T Consensus         4 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   83 (268)
T cd06624           4 EYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIF   83 (268)
T ss_pred             ccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEE
Confidence            445666766789999999999999874 578899999886655555667666554      666666655443  22233


Q ss_pred             hccccCCCcccC-------C--CHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECC-CCcEEEEecCcc
Q 006915          472 MKTFSDPTLSAL-------L--HWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQ-EMNPKISDFGLA  537 (626)
Q Consensus       472 ~~~~~~~~l~~~-------l--~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~-~~~~kl~DFGla  537 (626)
                      ++++.++++...       +  ++..+..++.||+.||+|||+.+   |+||||||+||+++. ++.+||+|||++
T Consensus        84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~h~dl~p~nil~~~~~~~~~l~dfg~~  156 (268)
T cd06624          84 MEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLVNTYSGVVKISDFGTS  156 (268)
T ss_pred             EecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCeEEEecchhh
Confidence            445555554332       3  56677789999999999999987   999999999999976 678999999986

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.78  E-value=7.3e-19  Score=184.94  Aligned_cols=128  Identities=28%  Similarity=0.315  Sum_probs=93.9

Q ss_pred             CccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCcccHHHHHHHHHh------------ccccceecchHH------
Q 006915          406 NFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQGLEEFKNEIET------------SNSNATIGANVK------  466 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~e~~~------------~~~~~~~~~~~~------  466 (626)
                      +|.+.+.||+|.||+|-+|... +++.||||+++.... -..+-..|+.+            .|++++..+...      
T Consensus       187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~-f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci  265 (586)
T KOG0667|consen  187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKR-FLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI  265 (586)
T ss_pred             EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChH-HHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence            6888999999999999999874 599999999986432 12222333332            445555543221      


Q ss_pred             ---HHHHhhccccCCCcccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCC--CcEEEEecCcc
Q 006915          467 ---AFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQE--MNPKISDFGLA  537 (626)
Q Consensus       467 ---~~~~~~~~~~~~~l~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~--~~~kl~DFGla  537 (626)
                         .+-..+..+...+...-|+......|+.||+.||.+||+.+   |||+||||+||||.+-  ..+||+|||.|
T Consensus       266 VfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~---IIHcDLKPENILL~~~~r~~vKVIDFGSS  338 (586)
T KOG0667|consen  266 VFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELG---IIHCDLKPENILLKDPKRSRIKVIDFGSS  338 (586)
T ss_pred             eehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCChhheeeccCCcCceeEEecccc
Confidence               22222333344444555888889999999999999999988   9999999999999654  36999999998

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.78  E-value=5.3e-19  Score=179.28  Aligned_cols=129  Identities=26%  Similarity=0.330  Sum_probs=100.3

Q ss_pred             CccccccccccCeEEEEEEEc-CCCcEEEEEEecCC-CcccHHHHHHHHHh------ccccceecchHH--HHHHhhccc
Q 006915          406 NFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSA-SGQGLEEFKNEIET------SNSNATIGANVK--AFVREMKTF  475 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~-~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~~  475 (626)
                      +|+..+.||+|+||.||+|.. .+++.||||.+... ......++.+|++.      ++++.+++.+..  .+...+++.
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   81 (279)
T cd06619           2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM   81 (279)
T ss_pred             cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence            567778999999999999987 46889999998753 23334567677653      666666654332  222345566


Q ss_pred             cCCCcc--cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          476 SDPTLS--ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       476 ~~~~l~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      .++.+.  ..+++.....++.|++.||.|||+.+   |+|+||||+|||++.++.+||+|||++
T Consensus        82 ~~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nill~~~~~~~l~dfg~~  142 (279)
T cd06619          82 DGGSLDVYRKIPEHVLGRIAVAVVKGLTYLWSLK---ILHRDVKPSNMLVNTRGQVKLCDFGVS  142 (279)
T ss_pred             CCCChHHhhcCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCCHHHEEECCCCCEEEeeCCcc
Confidence            665543  34677888899999999999999998   999999999999999999999999987

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.78  E-value=5.2e-19  Score=184.48  Aligned_cols=129  Identities=26%  Similarity=0.380  Sum_probs=97.3

Q ss_pred             CccccccccccCeEEEEEEEcC-CCcEEEEEEecCC--CcccHHHHHHHHH------hccccceecchHH-------HHH
Q 006915          406 NFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSA--SGQGLEEFKNEIE------TSNSNATIGANVK-------AFV  469 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~--~~~~~~~~~~e~~------~~~~~~~~~~~~~-------~~~  469 (626)
                      +|++.+.||+|+||.||+|+.. +++.||||++...  .......+.+|++      ++|++.+.+....       .++
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~   80 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY   80 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence            4778899999999999999874 5899999998742  2223345666654      4666666554321       122


Q ss_pred             HhhccccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcch
Q 006915          470 REMKTFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLAL  538 (626)
Q Consensus       470 ~~~~~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~  538 (626)
                      ..++++. +++.      ..+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++.
T Consensus        81 lv~e~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kL~Dfg~~~  151 (338)
T cd07859          81 VVFELME-SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTAN---VFHRDLKPKNILANADCKLKICDFGLAR  151 (338)
T ss_pred             EEEecCC-CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEccCcccc
Confidence            3344442 3332      23678888999999999999999998   9999999999999999999999999984

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.78  E-value=2.1e-19  Score=186.77  Aligned_cols=130  Identities=25%  Similarity=0.317  Sum_probs=100.5

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHHHH------hccccceecchHH--HHHHhh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNEIE------TSNSNATIGANVK--AFVREM  472 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~  472 (626)
                      ++|.+.+.||+|+||.||+|+.. +++.||||.+....   ....+.+.+|+.      +++++.+.+....  .++..+
T Consensus        18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   97 (329)
T PTZ00263         18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL   97 (329)
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence            56888899999999999999985 58899999987432   123344555544      4777777654332  233445


Q ss_pred             ccccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          473 KTFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       473 ~~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +++.++++..      .+++.....++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus        98 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~  165 (329)
T PTZ00263         98 EFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKD---IIYRDLKPENLLLDNKGHVKVTDFGFA  165 (329)
T ss_pred             cCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEECCCCCEEEeeccCc
Confidence            5555555432      3567778889999999999999998   999999999999999999999999987

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.78  E-value=4.4e-19  Score=178.10  Aligned_cols=169  Identities=20%  Similarity=0.290  Sum_probs=118.4

Q ss_pred             ccccccCeEEEEEEEcCC-------------CcEEEEEEecCCCcccHHHHHHH------HHhccccceecchHH--HHH
Q 006915          411 NKLGKGGFGPVYKAKFPG-------------GQQIAVKRLSSASGQGLEEFKNE------IETSNSNATIGANVK--AFV  469 (626)
Q Consensus       411 ~~lG~G~fG~Vy~~~~~~-------------~~~vAvK~l~~~~~~~~~~~~~e------~~~~~~~~~~~~~~~--~~~  469 (626)
                      +.||+|+||.||+|++.+             ...||+|.+..........|.+|      +.++|++++.+.+..  ..+
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~   80 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI   80 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence            368999999999998632             23589998875444334445444      345888888776543  233


Q ss_pred             HhhccccCCCcc-------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCc-------EEEEecC
Q 006915          470 REMKTFSDPTLS-------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMN-------PKISDFG  535 (626)
Q Consensus       470 ~~~~~~~~~~l~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~-------~kl~DFG  535 (626)
                      ..+++...+.+.       ..+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.       +|++|||
T Consensus        81 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g  157 (262)
T cd05077          81 MVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKD---LVHGNVCTKNILLAREGIDGECGPFIKLSDPG  157 (262)
T ss_pred             EEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCC---eECCCCCcccEEEecCCccCCCCceeEeCCCC
Confidence            444554444322       34788889999999999999999987   999999999999987664       8999999


Q ss_pred             cchhcc------------ccc-----------------------------cCCC-CC---------------hHHHHHHH
Q 006915          536 LALDMM------------DQK-----------------------------LHAS-SK---------------PNEILKCI  558 (626)
Q Consensus       536 la~~~~------------~~~-----------------------------~~~~-~~---------------~~~~~~~~  558 (626)
                      ++..+.            .++                             .... ..               ......+.
T Consensus       158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (262)
T cd05077         158 IPITVLSRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKERFYEGQCMLVTPSCKELA  237 (262)
T ss_pred             CCccccCcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHHHHhcCccCCCCChHHHH
Confidence            872111            010                             0000 00               01123566


Q ss_pred             HHHHHhcccCCCCCCCHHHHHHHh
Q 006915          559 NVGLLCVQEDPNDRPTMSDVVIML  582 (626)
Q Consensus       559 ~~~~~C~~~~p~~RPs~~~vl~~L  582 (626)
                      .++..||+.||.+||++.+++..|
T Consensus       238 ~li~~cl~~dp~~Rp~~~~il~~~  261 (262)
T cd05077         238 DLMTHCMNYDPNQRPFFRAIMRDI  261 (262)
T ss_pred             HHHHHHcCCChhhCcCHHHHHHhc
Confidence            788899999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.78  E-value=4.5e-19  Score=187.55  Aligned_cols=128  Identities=26%  Similarity=0.409  Sum_probs=95.1

Q ss_pred             CccccccccccCeEEEEEEEc-CCCcEEEEEEecCC--CcccHHHHHHHHHh------ccccceecchHH-------HHH
Q 006915          406 NFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSA--SGQGLEEFKNEIET------SNSNATIGANVK-------AFV  469 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~--~~~~~~~~~~e~~~------~~~~~~~~~~~~-------~~~  469 (626)
                      +|++.+.||+|+||.||++.. .+++.||||++...  ......++.+|++.      +|++.+.+....       .++
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~   80 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY   80 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence            467789999999999999987 46899999998643  22234456666543      566655543221       111


Q ss_pred             HhhccccCCCc------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          470 REMKTFSDPTL------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       470 ~~~~~~~~~~l------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ..++++. .++      ...+++.....++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus        81 lv~e~~~-~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~a  150 (372)
T cd07853          81 VVTELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAG---ILHRDIKPGNLLVNSNCVLKICDFGLA  150 (372)
T ss_pred             EEeeccc-cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHHEEECCCCCEEeccccce
Confidence            2223322 222      234778889999999999999999998   999999999999999999999999987

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.78  E-value=5.1e-19  Score=181.66  Aligned_cols=130  Identities=29%  Similarity=0.403  Sum_probs=97.2

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCc-ccHHHHHHHH------HhccccceecchHH--HHHHhhc
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASG-QGLEEFKNEI------ETSNSNATIGANVK--AFVREMK  473 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~-~~~~~~~~e~------~~~~~~~~~~~~~~--~~~~~~~  473 (626)
                      .++|.+.+.||+|+||.||+|+.. +++.||||.+..... .....+.+|+      .++|++.+.+....  .++.+++
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   83 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE   83 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence            467899999999999999999985 588999999874322 2223344454      34777766654322  2223334


Q ss_pred             cccCCCc-------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          474 TFSDPTL-------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       474 ~~~~~~l-------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++. +++       ...+....+..++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||++
T Consensus        84 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~  150 (303)
T cd07869          84 YVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRY---ILHRDLKPQNLLISDTGELKLADFGLA  150 (303)
T ss_pred             CCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECCCCcc
Confidence            332 222       123677888899999999999999998   999999999999999999999999987

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.78  E-value=6.2e-19  Score=185.55  Aligned_cols=131  Identities=27%  Similarity=0.323  Sum_probs=98.3

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCC--CcccHHHHHHHHH------hccccceecchHH--------
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSA--SGQGLEEFKNEIE------TSNSNATIGANVK--------  466 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~--~~~~~~~~~~e~~------~~~~~~~~~~~~~--------  466 (626)
                      .++|.+.+.||+|+||.||++... +++.||||.+...  .......+.+|+.      ++|++++.+....        
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~   99 (359)
T cd07876          20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQ   99 (359)
T ss_pred             hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccc
Confidence            468999999999999999999874 5899999999743  2223344555544      3666666654321        


Q ss_pred             HHHHhhccccCCCc---ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          467 AFVREMKTFSDPTL---SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       467 ~~~~~~~~~~~~~l---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      .++..++++.....   ...+++.....++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus       100 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---ivHrDlkp~NIl~~~~~~~kl~Dfg~a  170 (359)
T cd07876         100 DVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA  170 (359)
T ss_pred             eeEEEEeCCCcCHHHHHhccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEecCCCc
Confidence            12233444433211   223677888889999999999999998   999999999999999999999999987

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.78  E-value=2.5e-19  Score=182.54  Aligned_cols=129  Identities=24%  Similarity=0.399  Sum_probs=96.3

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC-cccHHHHHHHH------HhccccceecchHH--HHHHhhcc
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS-GQGLEEFKNEI------ETSNSNATIGANVK--AFVREMKT  474 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~e~------~~~~~~~~~~~~~~--~~~~~~~~  474 (626)
                      ++|.+.+.||+|+||.||+|+.. +++.||+|.++... ......+.+|+      .++|++++.+....  .++.++++
T Consensus         5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   84 (288)
T cd07871           5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY   84 (288)
T ss_pred             ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence            56888899999999999999875 58899999987432 22223344444      34677776654322  12233343


Q ss_pred             ccCCCcc-------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          475 FSDPTLS-------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       475 ~~~~~l~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +.+ ++.       ..+++.....++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus        85 ~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~DfG~~  150 (288)
T cd07871          85 LDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRK---ILHRDLKPQNLLINEKGELKLADFGLA  150 (288)
T ss_pred             CCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEECcCcce
Confidence            332 222       23677888899999999999999998   999999999999999999999999987

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.78  E-value=4.6e-19  Score=178.61  Aligned_cols=125  Identities=26%  Similarity=0.424  Sum_probs=94.3

Q ss_pred             ccccccCeEEEEEEEcCC---CcEEEEEEecCCC-cccHHHHHHHHH------hccccceecchHH--HHHHhhccccCC
Q 006915          411 NKLGKGGFGPVYKAKFPG---GQQIAVKRLSSAS-GQGLEEFKNEIE------TSNSNATIGANVK--AFVREMKTFSDP  478 (626)
Q Consensus       411 ~~lG~G~fG~Vy~~~~~~---~~~vAvK~l~~~~-~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~~~~~~~  478 (626)
                      ++||+|+||.||+|...+   ...+|+|.+.... ......|.+|++      ++|++++++.+..  .++..+++...+
T Consensus         1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g   80 (269)
T cd05042           1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG   80 (269)
T ss_pred             CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence            369999999999997643   4578999876432 223345666654      4778877765543  344556666655


Q ss_pred             CcccC-----------CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcch
Q 006915          479 TLSAL-----------LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLAL  538 (626)
Q Consensus       479 ~l~~~-----------l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~  538 (626)
                      ++..+           .++...+.++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||++.
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~  148 (269)
T cd05042          81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD---FIHSDLALRNCQLTADLSVKIGDYGLAL  148 (269)
T ss_pred             cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC---EecccccHhheEecCCCcEEEecccccc
Confidence            55433           345667889999999999999997   9999999999999999999999999873

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.78  E-value=4.7e-19  Score=178.60  Aligned_cols=179  Identities=21%  Similarity=0.289  Sum_probs=129.3

Q ss_pred             cCccccccccccCeEEEEEEEcCC----CcEEEEEEecCCC-cccHHHHHHHHHh------ccccceecchHH-HHHHhh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFPG----GQQIAVKRLSSAS-GQGLEEFKNEIET------SNSNATIGANVK-AFVREM  472 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~~----~~~vAvK~l~~~~-~~~~~~~~~e~~~------~~~~~~~~~~~~-~~~~~~  472 (626)
                      ++|.+.+.||+|+||.||+|...+    ...||||...... ....+.+.+|+..      ++++++.+.+.. ..+..+
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~lv~   85 (270)
T cd05056           6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITENPVWIVM   85 (270)
T ss_pred             hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcCCCcEEEE
Confidence            457778999999999999998643    3479999987544 3445567777553      666776654332 222345


Q ss_pred             ccccCCCccc-------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhcc----
Q 006915          473 KTFSDPTLSA-------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMM----  541 (626)
Q Consensus       473 ~~~~~~~l~~-------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~----  541 (626)
                      ++...+++..       .+++..++.++.+++.||.|||+.+   ++|+||||+|||++.++.+||+|||++..+.    
T Consensus        86 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~  162 (270)
T cd05056          86 ELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKR---FVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESY  162 (270)
T ss_pred             EcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccChheEEEecCCCeEEccCceeeecccccc
Confidence            5555554432       3678899999999999999999987   9999999999999999999999999872110    


Q ss_pred             -------------ccccC------------------------C----------------------CCChHHHHHHHHHHH
Q 006915          542 -------------DQKLH------------------------A----------------------SSKPNEILKCINVGL  562 (626)
Q Consensus       542 -------------~~~~~------------------------~----------------------~~~~~~~~~~~~~~~  562 (626)
                                   .+...                        .                      ..+......+.+++.
T Consensus       163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  242 (270)
T cd05056         163 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMT  242 (270)
T ss_pred             eecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHH
Confidence                         00000                        0                      000111245677888


Q ss_pred             HhcccCCCCCCCHHHHHHHhcccc
Q 006915          563 LCVQEDPNDRPTMSDVVIMLGSEA  586 (626)
Q Consensus       563 ~C~~~~p~~RPs~~~vl~~L~~~~  586 (626)
                      .|+..+|.+||++.+++..|....
T Consensus       243 ~~l~~~P~~Rpt~~~~~~~l~~~~  266 (270)
T cd05056         243 KCWAYDPSKRPRFTELKAQLSDIL  266 (270)
T ss_pred             HHcCCChhhCcCHHHHHHHHHHHH
Confidence            999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.78  E-value=8.7e-19  Score=174.56  Aligned_cols=170  Identities=29%  Similarity=0.395  Sum_probs=122.6

Q ss_pred             ccccccCeEEEEEEEcCCCcEEEEEEecCCCcc-cHHHHHHHHHh------ccccceecchHH--HHHHhhccccCCCcc
Q 006915          411 NKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQ-GLEEFKNEIET------SNSNATIGANVK--AFVREMKTFSDPTLS  481 (626)
Q Consensus       411 ~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~-~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~~~~~~l~  481 (626)
                      ++||+|+||.||++...+++.||+|.+...... ....+.+|++.      ++++.+.+....  ..+..++++.++++.
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~   80 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL   80 (251)
T ss_pred             CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence            479999999999999877999999998754332 44567777654      555555543332  222344555444432


Q ss_pred             -------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhcc-------------
Q 006915          482 -------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMM-------------  541 (626)
Q Consensus       482 -------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~-------------  541 (626)
                             ..+++...+.++.+++.||.|||+++   ++||||||+|||++.++.+||+|||++....             
T Consensus        81 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~  157 (251)
T cd05041          81 TFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQI  157 (251)
T ss_pred             HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---EehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcc
Confidence                   23577888999999999999999998   9999999999999999999999999873111             


Q ss_pred             -----cccc-----------------------C-CC----------------------CChHHHHHHHHHHHHhcccCCC
Q 006915          542 -----DQKL-----------------------H-AS----------------------SKPNEILKCINVGLLCVQEDPN  570 (626)
Q Consensus       542 -----~~~~-----------------------~-~~----------------------~~~~~~~~~~~~~~~C~~~~p~  570 (626)
                           .++.                       . ..                      .+......+.+++..|++.+|.
T Consensus       158 ~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  237 (251)
T cd05041         158 PIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGYRMPAPQLCPEEIYRLMLQCWAYDPE  237 (251)
T ss_pred             eeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHhccChh
Confidence                 0000                       0 00                      0001124677788899999999


Q ss_pred             CCCCHHHHHHHhc
Q 006915          571 DRPTMSDVVIMLG  583 (626)
Q Consensus       571 ~RPs~~~vl~~L~  583 (626)
                      +||++.+++..|.
T Consensus       238 ~Rp~~~ell~~l~  250 (251)
T cd05041         238 NRPSFSEIYNELQ  250 (251)
T ss_pred             hCcCHHHHHHHhh
Confidence            9999999999885

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.78  E-value=8.9e-19  Score=184.09  Aligned_cols=132  Identities=26%  Similarity=0.324  Sum_probs=98.0

Q ss_pred             hhcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC--cccHHHHHHHH------HhccccceecchHH-------
Q 006915          403 ATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS--GQGLEEFKNEI------ETSNSNATIGANVK-------  466 (626)
Q Consensus       403 ~~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~e~------~~~~~~~~~~~~~~-------  466 (626)
                      ..++|...+.||+|+||.||++... .++.||||++....  ......+.+|+      .++|++.+.+....       
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   94 (355)
T cd07874          15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF   94 (355)
T ss_pred             hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence            4568999999999999999999874 58899999997532  22233444454      34777776654321       


Q ss_pred             -HHHHhhccccCCC---cccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          467 -AFVREMKTFSDPT---LSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       467 -~~~~~~~~~~~~~---l~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                       .++..++++....   +...+++..+..++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus        95 ~~~~lv~e~~~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDikp~Nill~~~~~~kl~Dfg~~  166 (355)
T cd07874          95 QDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA  166 (355)
T ss_pred             ceeEEEhhhhcccHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEECCCCCEEEeeCccc
Confidence             1122333333211   1223678888899999999999999998   999999999999999999999999998

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.78  E-value=1.1e-18  Score=174.33  Aligned_cols=175  Identities=22%  Similarity=0.376  Sum_probs=126.2

Q ss_pred             cCccccccccccCeEEEEEEEcCCCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH--HHHHhhcccc
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK--AFVREMKTFS  476 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~~~  476 (626)
                      .+|++.+.||+|+||.||++...++..+|||.+.... ....+|.+|++.      ++++.+++....  .++..+++..
T Consensus         4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~   82 (256)
T cd05112           4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME   82 (256)
T ss_pred             hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence            3577789999999999999988778899999987532 233456666543      556666554322  2334455555


Q ss_pred             CCCcc-------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhccc-------
Q 006915          477 DPTLS-------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD-------  542 (626)
Q Consensus       477 ~~~l~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~-------  542 (626)
                      ++.+.       ..+.+..+..++.+++.||+|||+.+   ++|+||||+||+++.++.+||+|||++....+       
T Consensus        83 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~  159 (256)
T cd05112          83 HGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSN---VIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSST  159 (256)
T ss_pred             CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccccceEEEcCCCeEEECCCcceeecccCcccccC
Confidence            54432       23678888999999999999999988   99999999999999999999999998632111       


Q ss_pred             ----------cc----------------------------cCC-CC-----------------ChHHHHHHHHHHHHhcc
Q 006915          543 ----------QK----------------------------LHA-SS-----------------KPNEILKCINVGLLCVQ  566 (626)
Q Consensus       543 ----------~~----------------------------~~~-~~-----------------~~~~~~~~~~~~~~C~~  566 (626)
                                +.                            ... ..                 +......+.+++.+||+
T Consensus       160 ~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~  239 (256)
T cd05112         160 GTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRLYKPRLASQSVYELMQHCWK  239 (256)
T ss_pred             CCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHcc
Confidence                      00                            000 00                 00012346788899999


Q ss_pred             cCCCCCCCHHHHHHHhc
Q 006915          567 EDPNDRPTMSDVVIMLG  583 (626)
Q Consensus       567 ~~p~~RPs~~~vl~~L~  583 (626)
                      .+|++||++.++++.|.
T Consensus       240 ~~p~~Rp~~~~~l~~l~  256 (256)
T cd05112         240 ERPEDRPSFSLLLHQLA  256 (256)
T ss_pred             cChhhCCCHHHHHHhhC
Confidence            99999999999999873

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.77  E-value=6.2e-19  Score=192.24  Aligned_cols=130  Identities=17%  Similarity=0.139  Sum_probs=102.0

Q ss_pred             CccccccccccCeEEEEEEEcC-C-CcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH--HHHHhhccc
Q 006915          406 NFSEANKLGKGGFGPVYKAKFP-G-GQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK--AFVREMKTF  475 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~-~-~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~~  475 (626)
                      .|.+.+.||+|+||.||+|... + ++.||+|.+..........+.+|+..      +|++++++.+..  .++.++++.
T Consensus        68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~  147 (478)
T PTZ00267         68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG  147 (478)
T ss_pred             eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence            3888899999999999999763 3 67899998765444444556666553      677777765433  344566777


Q ss_pred             cCCCccc----------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcch
Q 006915          476 SDPTLSA----------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLAL  538 (626)
Q Consensus       476 ~~~~l~~----------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~  538 (626)
                      .++++..          .+++.....++.||+.||.|||+.+   |+||||||+||||+.++.+||+|||++.
T Consensus       148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~~~~~~kL~DFgla~  217 (478)
T PTZ00267        148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRK---MMHRDLKSANIFLMPTGIIKLGDFGFSK  217 (478)
T ss_pred             CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCcCHHhEEECCCCcEEEEeCcCce
Confidence            7776643          3667788889999999999999987   9999999999999999999999999983

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.77  E-value=7.1e-19  Score=179.96  Aligned_cols=130  Identities=25%  Similarity=0.403  Sum_probs=101.8

Q ss_pred             cCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCCcccHHHHHHHHH------hccccceecchHH--HHHHhhccc
Q 006915          405 DNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQGLEEFKNEIE------TSNSNATIGANVK--AFVREMKTF  475 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~~~~  475 (626)
                      .+|+..+.||+|+||.||+|.. .+++.||+|.+........+.+.+|+.      +++++.+.+....  .++.++++.
T Consensus        20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~   99 (296)
T cd06654          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   99 (296)
T ss_pred             cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence            4788889999999999999986 458899999997654444455655554      4666666654332  233445555


Q ss_pred             cCCCccc-----CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          476 SDPTLSA-----LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       476 ~~~~l~~-----~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      .++++..     .+.+.++..++.|++.||+|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus       100 ~~~~L~~~~~~~~~~~~~~~~i~~ql~~aL~~LH~~g---i~H~dLkp~Nill~~~~~~kl~dfg~~  163 (296)
T cd06654         100 AGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFC  163 (296)
T ss_pred             CCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEECccccc
Confidence            5555543     3678888999999999999999998   999999999999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.77  E-value=7.8e-19  Score=177.98  Aligned_cols=179  Identities=23%  Similarity=0.341  Sum_probs=128.6

Q ss_pred             cCccccccccccCeEEEEEEEcCC-C----cEEEEEEecCCCc-ccHHHHHHHHH------hccccceecchHH-HHHHh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFPG-G----QQIAVKRLSSASG-QGLEEFKNEIE------TSNSNATIGANVK-AFVRE  471 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~~-~----~~vAvK~l~~~~~-~~~~~~~~e~~------~~~~~~~~~~~~~-~~~~~  471 (626)
                      .+|.+.+.||+|+||.||+|...+ +    ..+|+|.+..... ....++.+|+.      ++|++.+.+.+.. .+...
T Consensus         7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~v   86 (279)
T cd05057           7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLSSQVQLI   86 (279)
T ss_pred             HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCceEEE
Confidence            457778999999999999998642 3    3699999875432 33455666654      3777777765543 22234


Q ss_pred             hccccCCCccc-------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhcc---
Q 006915          472 MKTFSDPTLSA-------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMM---  541 (626)
Q Consensus       472 ~~~~~~~~l~~-------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~---  541 (626)
                      ++++..+++.+       .+++...+.++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||++..+.   
T Consensus        87 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~  163 (279)
T cd05057          87 TQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDE  163 (279)
T ss_pred             EecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---EEecccCcceEEEcCCCeEEECCCcccccccCcc
Confidence            45555554432       3678899999999999999999987   9999999999999999999999999873211   


Q ss_pred             ---------------ccc----------------------------cC-CCCChH-----------------HHHHHHHH
Q 006915          542 ---------------DQK----------------------------LH-ASSKPN-----------------EILKCINV  560 (626)
Q Consensus       542 ---------------~~~----------------------------~~-~~~~~~-----------------~~~~~~~~  560 (626)
                                     .+.                            .. ......                 ....+..+
T Consensus       164 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (279)
T cd05057         164 KEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGERLPQPPICTIDVYMV  243 (279)
T ss_pred             cceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCCCCCCCCCCCHHHHHH
Confidence                           000                            00 000001                 11345677


Q ss_pred             HHHhcccCCCCCCCHHHHHHHhcccc
Q 006915          561 GLLCVQEDPNDRPTMSDVVIMLGSEA  586 (626)
Q Consensus       561 ~~~C~~~~p~~RPs~~~vl~~L~~~~  586 (626)
                      +..||..+|.+||++.+++..|....
T Consensus       244 ~~~~l~~~p~~Rp~~~~l~~~l~~~~  269 (279)
T cd05057         244 LVKCWMIDAESRPTFKELINEFSKMA  269 (279)
T ss_pred             HHHHcCCChhhCCCHHHHHHHHHHHH
Confidence            78899999999999999999998764

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.77  E-value=6.5e-19  Score=185.41  Aligned_cols=134  Identities=28%  Similarity=0.344  Sum_probs=104.0

Q ss_pred             HHhhcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHHHHh-------ccccceecchH--HH
Q 006915          401 LAATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNEIET-------SNSNATIGANV--KA  467 (626)
Q Consensus       401 ~~~~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e~~~-------~~~~~~~~~~~--~~  467 (626)
                      ....++|...++||+|.||+|+++.++ +++.+|||.+++..   ....+..+.|..+       +-++.+.....  ..
T Consensus       364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~  443 (694)
T KOG0694|consen  364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEH  443 (694)
T ss_pred             cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCe
Confidence            345678999999999999999999985 48899999999753   2344555555444       22333322211  14


Q ss_pred             HHHhhccccCCCccc-----CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          468 FVREMKTFSDPTLSA-----LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       468 ~~~~~~~~~~~~l~~-----~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++.+|+|..++++..     .++.....-++..|+.||+|||+++   ||+||||.+|||||.+|.+||+||||+
T Consensus       444 l~fvmey~~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~---IIYRDlKLdNiLLD~eGh~kiADFGlc  515 (694)
T KOG0694|consen  444 LFFVMEYVAGGDLMHHIHTDVFSEPRARFYAAEVVLGLQFLHENG---IIYRDLKLDNLLLDTEGHVKIADFGLC  515 (694)
T ss_pred             EEEEEEecCCCcEEEEEecccccHHHHHHHHHHHHHHHHHHHhcC---ceeeecchhheEEcccCcEEecccccc
Confidence            446788888887533     3667777889999999999999998   999999999999999999999999999

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.77  E-value=4.9e-19  Score=185.67  Aligned_cols=132  Identities=25%  Similarity=0.328  Sum_probs=99.6

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHHHHh------ccccceecchHH--HHHHhh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNEIET------SNSNATIGANVK--AFVREM  472 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~  472 (626)
                      ++|.+.+.||+|+||.||+|+.. +++.||||+++...   ......+..|++.      ++++.+......  .++.++
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM   80 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence            46888999999999999999985 68999999997432   1234455555544      445544432221  223445


Q ss_pred             ccccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchh
Q 006915          473 KTFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALD  539 (626)
Q Consensus       473 ~~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~  539 (626)
                      +++.++++.      ..++......++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||++..
T Consensus        81 e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~g---iiH~Dlkp~NIll~~~~~~kL~Dfg~~~~  150 (350)
T cd05573          81 EYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLG---FIHRDIKPDNILIDADGHIKLADFGLCKK  150 (350)
T ss_pred             cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEeecCCCCcc
Confidence            666555543      34678888899999999999999987   99999999999999999999999998743

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.77  E-value=6.8e-19  Score=182.80  Aligned_cols=125  Identities=26%  Similarity=0.284  Sum_probs=95.3

Q ss_pred             ccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHHHH------hccccceecchHH--HHHHhhccccCC
Q 006915          411 NKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNEIE------TSNSNATIGANVK--AFVREMKTFSDP  478 (626)
Q Consensus       411 ~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~~~~~~~  478 (626)
                      +.||+|+||.||+++.. +++.||||.+....   ......+.+|+.      +++++.+......  .++.+++++.++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g   80 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG   80 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence            36999999999999874 58999999997532   223345555554      3555555443222  333456666666


Q ss_pred             Ccc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcch
Q 006915          479 TLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLAL  538 (626)
Q Consensus       479 ~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~  538 (626)
                      ++.      ..+++.....++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||++.
T Consensus        81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~NIll~~~~~~kL~DfG~~~  143 (328)
T cd05593          81 ELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGK---IVYRDLKLENLMLDKDGHIKITDFGLCK  143 (328)
T ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeEECCCCcEEEecCcCCc
Confidence            553      34678888999999999999999998   9999999999999999999999999873

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.77  E-value=1.7e-18  Score=173.18  Aligned_cols=170  Identities=32%  Similarity=0.492  Sum_probs=122.6

Q ss_pred             ccccccCeEEEEEEEcCC----CcEEEEEEecCCCcc-cHHHHHHHHHh------ccccceecchHH--HHHHhhccccC
Q 006915          411 NKLGKGGFGPVYKAKFPG----GQQIAVKRLSSASGQ-GLEEFKNEIET------SNSNATIGANVK--AFVREMKTFSD  477 (626)
Q Consensus       411 ~~lG~G~fG~Vy~~~~~~----~~~vAvK~l~~~~~~-~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~~~~  477 (626)
                      +.||+|+||.||+|....    +..||||.+...... ....+.+|++.      ++++.+.+....  .+...++++.+
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG   80 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence            469999999999998853    789999999864433 25566666554      555555544333  22233444433


Q ss_pred             CCc---------------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhccc
Q 006915          478 PTL---------------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD  542 (626)
Q Consensus       478 ~~l---------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~  542 (626)
                      +++               ...+++..+..++.|++.||.|||+.+   ++|+||||+||++++++.+||+|||++..+..
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~~~~  157 (262)
T cd00192          81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK---FVHRDLAARNCLVGEDLVVKISDFGLSRDVYD  157 (262)
T ss_pred             CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCC---cccCccCcceEEECCCCcEEEccccccccccc
Confidence            332               245788999999999999999999987   99999999999999999999999998832221


Q ss_pred             cc------------------c-----------------------CC-----------------------CCChHHHHHHH
Q 006915          543 QK------------------L-----------------------HA-----------------------SSKPNEILKCI  558 (626)
Q Consensus       543 ~~------------------~-----------------------~~-----------------------~~~~~~~~~~~  558 (626)
                      ..                  .                       ..                       ..+......+.
T Consensus       158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (262)
T cd00192         158 DDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYRLPKPEYCPDELY  237 (262)
T ss_pred             ccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCccCChHHH
Confidence            10                  0                       00                       00011124577


Q ss_pred             HHHHHhcccCCCCCCCHHHHHHHhc
Q 006915          559 NVGLLCVQEDPNDRPTMSDVVIMLG  583 (626)
Q Consensus       559 ~~~~~C~~~~p~~RPs~~~vl~~L~  583 (626)
                      +++..|++.+|.+||++.+++..|+
T Consensus       238 ~li~~~l~~~p~~Rps~~~l~~~l~  262 (262)
T cd00192         238 ELMLSCWQLDPEDRPTFSELVERLE  262 (262)
T ss_pred             HHHHHHccCCcccCcCHHHHHHhhC
Confidence            7888999999999999999999874

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.77  E-value=1.5e-19  Score=190.43  Aligned_cols=133  Identities=25%  Similarity=0.317  Sum_probs=102.2

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHHHH------hccccceecchHH--HHHHhh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNEIE------TSNSNATIGANVK--AFVREM  472 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~  472 (626)
                      ++|+..+.||+|+||+||+++.. +++.||||+++...   ......+.+|+.      +++++.+.+....  .++.++
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~   80 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM   80 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence            46888899999999999999874 58899999997532   122234444543      3566666544332  334556


Q ss_pred             ccccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhc
Q 006915          473 KTFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM  540 (626)
Q Consensus       473 ~~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~  540 (626)
                      +++.++++..      .+++.....++.|++.||+|||+.+   |+||||||+|||++.++.+||+|||++..+
T Consensus        81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---ivHrDlKp~NILi~~~~~vkL~DFGla~~~  151 (363)
T cd05628          81 EFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLG---FIHRDIKPDNLLLDSKGHVKLSDFGLCTGL  151 (363)
T ss_pred             cCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCCEEEeeccCcccc
Confidence            6666666533      4678888999999999999999998   999999999999999999999999998644

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.77  E-value=5.7e-19  Score=183.13  Aligned_cols=128  Identities=29%  Similarity=0.369  Sum_probs=97.9

Q ss_pred             ccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHHHH---------hccccceecchHH--HHHHh
Q 006915          407 FSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNEIE---------TSNSNATIGANVK--AFVRE  471 (626)
Q Consensus       407 f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e~~---------~~~~~~~~~~~~~--~~~~~  471 (626)
                      |++.+.||+|+||.||+|... +++.||||.++...   ....+.+.+|+.         +++++++.+....  .++.+
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv   80 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV   80 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence            566789999999999999874 58999999997432   223344555543         3566665553322  23345


Q ss_pred             hccccCCCc-----ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          472 MKTFSDPTL-----SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       472 ~~~~~~~~l-----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +++..++++     ...+++.....++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus        81 ~E~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrdlkp~Nill~~~~~~kL~Dfg~~  148 (324)
T cd05589          81 MEYAAGGDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHENK---IVYRDLKLDNLLLDTEGFVKIADFGLC  148 (324)
T ss_pred             EcCCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCcEEeCcccCC
Confidence            566665554     235788999999999999999999998   999999999999999999999999987

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.77  E-value=7.6e-19  Score=179.82  Aligned_cols=130  Identities=26%  Similarity=0.400  Sum_probs=102.4

Q ss_pred             cCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCCcccHHHHHHHHH------hccccceecchHH--HHHHhhccc
Q 006915          405 DNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQGLEEFKNEIE------TSNSNATIGANVK--AFVREMKTF  475 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~~~~  475 (626)
                      ++|...+.||+|+||.||+|.. .+++.||||.+........+.+.+|+.      +++++.+.+.+..  .++..+++.
T Consensus        19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~   98 (297)
T cd06656          19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   98 (297)
T ss_pred             hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeeccc
Confidence            5788889999999999999986 468999999997654444455655554      4666666654432  223445555


Q ss_pred             cCCCccc-----CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          476 SDPTLSA-----LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       476 ~~~~l~~-----~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      .++++..     .+++.++..++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus        99 ~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~---i~H~dL~p~Nili~~~~~~~l~Dfg~~  162 (297)
T cd06656          99 AGGSLTDVVTETCMDEGQIAAVCRECLQALDFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFC  162 (297)
T ss_pred             CCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEECcCccc
Confidence            5555533     3678889999999999999999987   999999999999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>PTZ00284 protein kinase; Provisional

Probab=99.77  E-value=1.1e-18  Score=190.17  Aligned_cols=137  Identities=24%  Similarity=0.286  Sum_probs=92.5

Q ss_pred             HHHHHHhhcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCcc-----cHHHHHHHHHhcc------ccceecch
Q 006915          397 FESILAATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQ-----GLEEFKNEIETSN------SNATIGAN  464 (626)
Q Consensus       397 ~~~l~~~~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~-----~~~~~~~e~~~~~------~~~~~~~~  464 (626)
                      .+++...+++|.+.++||+|+||.||+|+.. .++.||||+++.....     .+.++.+++.+.+      ++.+..+.
T Consensus       121 ~~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~  200 (467)
T PTZ00284        121 GEDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYF  200 (467)
T ss_pred             CCccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEE
Confidence            3344556788999999999999999999874 5789999999643211     1223333443332      22222211


Q ss_pred             HH---HHHHhhccccCCCc------ccCCCHHHHHHHHHHHHHHHHHHHhC-CCCceEecCCCCCCeEECCCC-------
Q 006915          465 VK---AFVREMKTFSDPTL------SALLHWEMRFNIIIGIARGLLYLHQD-SRLRIIHRDLKTSNILLDQEM-------  527 (626)
Q Consensus       465 ~~---~~~~~~~~~~~~~l------~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~ivHrDlkp~NILl~~~~-------  527 (626)
                      ..   .++.+++++ ++.+      ...+.+.....|+.||+.||.|||++ +   ||||||||+|||++.++       
T Consensus       201 ~~~~~~~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~g---IiHrDlKP~NILl~~~~~~~~~~~  276 (467)
T PTZ00284        201 QNETGHMCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELH---LMHTDLKPENILMETSDTVVDPVT  276 (467)
T ss_pred             EcCCceEEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEEEecCCccccccc
Confidence            10   111122221 2222      12477888899999999999999974 6   99999999999998765       


Q ss_pred             ---------cEEEEecCcc
Q 006915          528 ---------NPKISDFGLA  537 (626)
Q Consensus       528 ---------~~kl~DFGla  537 (626)
                               .+||+|||++
T Consensus       277 ~~~~~~~~~~vkl~DfG~~  295 (467)
T PTZ00284        277 NRALPPDPCRVRICDLGGC  295 (467)
T ss_pred             ccccCCCCceEEECCCCcc
Confidence                     4999999975

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.77  E-value=4.4e-19  Score=183.96  Aligned_cols=129  Identities=29%  Similarity=0.310  Sum_probs=96.5

Q ss_pred             CccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHHHHh------c-cccceecchH--HHHHHhh
Q 006915          406 NFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNEIET------S-NSNATIGANV--KAFVREM  472 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e~~~------~-~~~~~~~~~~--~~~~~~~  472 (626)
                      +|++.+.||+|+||.||+|+.. +++.||||.+....   ....+.+..|.+.      . +++.+.....  ..++.++
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM   80 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence            4778899999999999999875 47899999997532   2334455555543      1 1222222211  1233456


Q ss_pred             ccccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          473 KTFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       473 ~~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +++.++++..      .+.+..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus        81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~~  148 (324)
T cd05587          81 EYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDAEGHIKIADFGMC  148 (324)
T ss_pred             cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEEcCCCCEEEeecCcc
Confidence            6666666532      3678888999999999999999998   999999999999999999999999987

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.77  E-value=8.5e-19  Score=175.35  Aligned_cols=169  Identities=19%  Similarity=0.275  Sum_probs=119.8

Q ss_pred             ccccccCeEEEEEEEcCC-C----------cEEEEEEecCCCcccHHHHHHHHH------hccccceecchHH-HHHHhh
Q 006915          411 NKLGKGGFGPVYKAKFPG-G----------QQIAVKRLSSASGQGLEEFKNEIE------TSNSNATIGANVK-AFVREM  472 (626)
Q Consensus       411 ~~lG~G~fG~Vy~~~~~~-~----------~~vAvK~l~~~~~~~~~~~~~e~~------~~~~~~~~~~~~~-~~~~~~  472 (626)
                      +.||+|+||.||+|.+.+ +          ..|++|.+...... ...|.+|+.      +++++.+++.+.. ..+..+
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~   79 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVRDENIMVE   79 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEecCCcEEEE
Confidence            469999999999998854 2          25888887654322 455656554      4667766665432 233445


Q ss_pred             ccccCCCccc-------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCC-------cEEEEecCcch
Q 006915          473 KTFSDPTLSA-------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEM-------NPKISDFGLAL  538 (626)
Q Consensus       473 ~~~~~~~l~~-------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~-------~~kl~DFGla~  538 (626)
                      ++..++++..       .+++..++.++.||+.||+|||+.+   |+||||||+|||++.++       .+||+|||++.
T Consensus        80 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~  156 (259)
T cd05037          80 EYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKK---LVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPI  156 (259)
T ss_pred             EcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCC---eecccCccceEEEecCccccCCceeEEeCCCCccc
Confidence            5555555432       4678889999999999999999987   99999999999999888       79999999873


Q ss_pred             hccc------------ccc-------------------------C-CCC--------------------ChHHHHHHHHH
Q 006915          539 DMMD------------QKL-------------------------H-ASS--------------------KPNEILKCINV  560 (626)
Q Consensus       539 ~~~~------------~~~-------------------------~-~~~--------------------~~~~~~~~~~~  560 (626)
                      .+..            ++.                         . ...                    +......+.++
T Consensus       157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  236 (259)
T cd05037         157 TVLSREERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQDQHRLPMPDCAELANL  236 (259)
T ss_pred             ccccccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHhcCCCCCCCCchHHHHH
Confidence            2110            000                         0 000                    00011356678


Q ss_pred             HHHhcccCCCCCCCHHHHHHHhc
Q 006915          561 GLLCVQEDPNDRPTMSDVVIMLG  583 (626)
Q Consensus       561 ~~~C~~~~p~~RPs~~~vl~~L~  583 (626)
                      +..|++.+|.+||++.++++.|+
T Consensus       237 i~~~l~~~p~~Rpt~~~il~~l~  259 (259)
T cd05037         237 INQCWTYDPTKRPSFRAILRDLN  259 (259)
T ss_pred             HHHHhccChhhCCCHHHHHHhcC
Confidence            88999999999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.77  E-value=9.7e-19  Score=182.03  Aligned_cols=129  Identities=26%  Similarity=0.263  Sum_probs=96.1

Q ss_pred             CccccccccccCeEEEEEEEc----CCCcEEEEEEecCCC----cccHHHHHHHHHh-------ccccceecchHH--HH
Q 006915          406 NFSEANKLGKGGFGPVYKAKF----PGGQQIAVKRLSSAS----GQGLEEFKNEIET-------SNSNATIGANVK--AF  468 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~----~~~~~vAvK~l~~~~----~~~~~~~~~e~~~-------~~~~~~~~~~~~--~~  468 (626)
                      +|++.+.||+|+||.||+++.    .+++.||+|.+.+..    ....+.+..|+..       ++++.+......  .+
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL   80 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence            477889999999999999975    357899999987421    1223345555543       444444332211  22


Q ss_pred             HHhhccccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          469 VREMKTFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       469 ~~~~~~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +..++++.++++.      ..+++.....++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus        81 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nili~~~~~~kl~DfG~~  152 (332)
T cd05614          81 HLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLG---IVYRDIKLENILLDSEGHVVLTDFGLS  152 (332)
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHeEECCCCCEEEeeCcCC
Confidence            3455666665553      34678888899999999999999998   999999999999999999999999987

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.77  E-value=1.4e-18  Score=176.49  Aligned_cols=128  Identities=30%  Similarity=0.405  Sum_probs=99.7

Q ss_pred             ccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCcccHHHHHHHHH------hccccceecchHH--HHHHhhccccC
Q 006915          407 FSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQGLEEFKNEIE------TSNSNATIGANVK--AFVREMKTFSD  477 (626)
Q Consensus       407 f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~~~~~~  477 (626)
                      |++.+.||+|+||.||+|... ++..+|+|.+........+.+.+|++      +++++.+.+.+..  .++..+++..+
T Consensus         7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~   86 (282)
T cd06643           7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG   86 (282)
T ss_pred             HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence            566789999999999999885 47889999997655555666766654      3666666654332  22234455544


Q ss_pred             CCcc-------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          478 PTLS-------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       478 ~~l~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +.+.       ..+++..+..++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus        87 ~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~---i~H~dlkp~nili~~~~~~kl~dfg~~  150 (282)
T cd06643          87 GAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENK---IIHRDLKAGNILFTLDGDIKLADFGVS  150 (282)
T ss_pred             CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEccCCCEEEcccccc
Confidence            4432       34788899999999999999999998   999999999999999999999999987

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.77  E-value=9.2e-19  Score=193.95  Aligned_cols=46  Identities=50%  Similarity=0.827  Sum_probs=44.0

Q ss_pred             HHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          489 RFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       489 ~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      .++++.+|++||.|+|+.+   ||||||||.||+|+++..+||.|||+|
T Consensus       699 ~wrLFreIlEGLaYIH~~g---iIHRDLKP~NIFLd~~~~VKIGDFGLA  744 (1351)
T KOG1035|consen  699 AWRLFREILEGLAYIHDQG---IIHRDLKPRNIFLDSRNSVKIGDFGLA  744 (1351)
T ss_pred             HHHHHHHHHHHHHHHHhCc---eeeccCCcceeEEcCCCCeeecccccc
Confidence            3578999999999999998   999999999999999999999999999

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.77  E-value=1.2e-18  Score=179.49  Aligned_cols=129  Identities=23%  Similarity=0.389  Sum_probs=96.5

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCc-ccHHHHHHHHH------hccccceecchHH--HHHHhhcc
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASG-QGLEEFKNEIE------TSNSNATIGANVK--AFVREMKT  474 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~-~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~~~  474 (626)
                      ++|.+.+.||+|+||.||+|+.. +++.||||.++.... .....+.+|++      +++++++.+....  .++.++++
T Consensus         6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   85 (309)
T cd07872           6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY   85 (309)
T ss_pred             CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence            56888899999999999999875 578999999874322 22233444443      4677776664332  22233343


Q ss_pred             ccCCCc-------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          475 FSDPTL-------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       475 ~~~~~l-------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +.. ++       ...+++.....++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus        86 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~  151 (309)
T cd07872          86 LDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRK---VLHRDLKPQNLLINERGELKLADFGLA  151 (309)
T ss_pred             CCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECccccc
Confidence            332 22       224678888889999999999999988   999999999999999999999999987

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.77  E-value=7e-19  Score=183.62  Aligned_cols=167  Identities=31%  Similarity=0.457  Sum_probs=126.9

Q ss_pred             cccccCeEEEEEEEcCC-CcEEEEEEecCCCcccHHHHHHHH------HhccccceecchHH--HHHHhhccccCCCccc
Q 006915          412 KLGKGGFGPVYKAKFPG-GQQIAVKRLSSASGQGLEEFKNEI------ETSNSNATIGANVK--AFVREMKTFSDPTLSA  482 (626)
Q Consensus       412 ~lG~G~fG~Vy~~~~~~-~~~vAvK~l~~~~~~~~~~~~~e~------~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~  482 (626)
                      +||+|.||+||.|+..+ ...+|||.+........+-+..||      .|.|+|+.+|.+.+  .+...|+..+++++..
T Consensus       582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs  661 (1226)
T KOG4279|consen  582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS  661 (1226)
T ss_pred             EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence            69999999999999865 568999999876655555455554      45888888877554  3334577788888876


Q ss_pred             CCC---------HHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEEC-CCCcEEEEecCcch--------------
Q 006915          483 LLH---------WEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLD-QEMNPKISDFGLAL--------------  538 (626)
Q Consensus       483 ~l~---------~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~-~~~~~kl~DFGla~--------------  538 (626)
                      +|.         +...--+.+||++||.|||++.   |||||||-.||||+ -.|.+||+|||.++              
T Consensus       662 LLrskWGPlKDNEstm~fYtkQILeGLkYLHen~---IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFTG  738 (1226)
T KOG4279|consen  662 LLRSKWGPLKDNESTMNFYTKQILEGLKYLHENK---IVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFTG  738 (1226)
T ss_pred             HHHhccCCCccchhHHHHHHHHHHHHhhhhhhcc---eeeccccCCcEEEeeccceEEecccccchhhccCCcccccccc
Confidence            652         4455568899999999999997   99999999999996 56889999999871              


Q ss_pred             -------hccccc--------------------------------------------cCCCCChHHHHHHHHHHHHhccc
Q 006915          539 -------DMMDQK--------------------------------------------LHASSKPNEILKCINVGLLCVQE  567 (626)
Q Consensus       539 -------~~~~~~--------------------------------------------~~~~~~~~~~~~~~~~~~~C~~~  567 (626)
                             +++|..                                            .+...+.+...++..+++.|.+.
T Consensus       739 TLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~iPeelsaeak~FilrcFep  818 (1226)
T KOG4279|consen  739 TLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPPIPEELSAEAKNFILRCFEP  818 (1226)
T ss_pred             chhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcceecCCCCcHHHHHHHHHHHHHHcCC
Confidence                   112211                                            11233344556788899999999


Q ss_pred             CCCCCCCHHHHHHH
Q 006915          568 DPNDRPTMSDVVIM  581 (626)
Q Consensus       568 ~p~~RPs~~~vl~~  581 (626)
                      +|.+||++.+++.-
T Consensus       819 d~~~R~sA~~LL~D  832 (1226)
T KOG4279|consen  819 DPCDRPSAKDLLQD  832 (1226)
T ss_pred             CcccCccHHHhccC
Confidence            99999999999853

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.77  E-value=1.2e-18  Score=180.84  Aligned_cols=124  Identities=27%  Similarity=0.284  Sum_probs=93.6

Q ss_pred             ccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHHHH------hccccceecchHH--HHHHhhccccCC
Q 006915          411 NKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNEIE------TSNSNATIGANVK--AFVREMKTFSDP  478 (626)
Q Consensus       411 ~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~~~~~~~  478 (626)
                      +.||+|+||.||+++.. +++.||||.+....   ......+..|++      +++++.+.+....  .++.+++++.++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence            36999999999999874 68999999997532   222344455544      3555555443222  334556666666


Q ss_pred             Ccc------cCCCHHHHHHHHHHHHHHHHHHHh-CCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          479 TLS------ALLHWEMRFNIIIGIARGLLYLHQ-DSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       479 ~l~------~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++.      ..+++.....++.||+.||.|||+ .+   |+||||||+|||++.++.+||+|||++
T Consensus        81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~---ivHrDikp~NIll~~~~~~kL~Dfg~~  143 (325)
T cd05594          81 ELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLC  143 (325)
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCC---EEecCCCCCeEEECCCCCEEEecCCCC
Confidence            543      347788899999999999999997 56   999999999999999999999999987

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.77  E-value=1.4e-18  Score=174.92  Aligned_cols=175  Identities=24%  Similarity=0.389  Sum_probs=122.9

Q ss_pred             CccccccccccCeEEEEEEEcCC--CcEEEEEEecCCC----------cccHHHHHHHHH-------hccccceecchHH
Q 006915          406 NFSEANKLGKGGFGPVYKAKFPG--GQQIAVKRLSSAS----------GQGLEEFKNEIE-------TSNSNATIGANVK  466 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~~--~~~vAvK~l~~~~----------~~~~~~~~~e~~-------~~~~~~~~~~~~~  466 (626)
                      +|++.+.||+|+||.||+|....  ++.+|||.+....          .....++.+|+.       +++++.+++.+..
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~   80 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE   80 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence            46778899999999999999854  7889999886321          122334555543       3666666654433


Q ss_pred             --HHHHhhccccCCCcc----------cCCCHHHHHHHHHHHHHHHHHHHh-CCCCceEecCCCCCCeEECCCCcEEEEe
Q 006915          467 --AFVREMKTFSDPTLS----------ALLHWEMRFNIIIGIARGLLYLHQ-DSRLRIIHRDLKTSNILLDQEMNPKISD  533 (626)
Q Consensus       467 --~~~~~~~~~~~~~l~----------~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivHrDlkp~NILl~~~~~~kl~D  533 (626)
                        .++..+++..++++.          ..+++..++.++.|++.||.|||+ .+   ++|+||||+|||++.++.+||+|
T Consensus        81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~---i~H~dl~~~nil~~~~~~~~l~d  157 (269)
T cd08528          81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKR---IVHRDLTPNNIMLGEDDKVTITD  157 (269)
T ss_pred             CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCc---eeecCCCHHHEEECCCCcEEEec
Confidence              222334444444332          236778889999999999999996 44   99999999999999999999999


Q ss_pred             cCcchhcccc---------------c---------------------------cC------------------CC-CChH
Q 006915          534 FGLALDMMDQ---------------K---------------------------LH------------------AS-SKPN  552 (626)
Q Consensus       534 FGla~~~~~~---------------~---------------------------~~------------------~~-~~~~  552 (626)
                      ||++......               .                           ..                  .. ....
T Consensus       158 fg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  237 (269)
T cd08528         158 FGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEPLPEGM  237 (269)
T ss_pred             ccceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCcCCccc
Confidence            9987221110               0                           00                  00 0001


Q ss_pred             HHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 006915          553 EILKCINVGLLCVQEDPNDRPTMSDVVIMLG  583 (626)
Q Consensus       553 ~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~  583 (626)
                      ....+.+++..|++.||.+||++.++..+|+
T Consensus       238 ~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~  268 (269)
T cd08528         238 YSEDVTDVITSCLTPDAEARPDIIQVSAMIS  268 (269)
T ss_pred             CCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence            1245777888999999999999999999885

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.77  E-value=5.7e-19  Score=182.09  Aligned_cols=123  Identities=24%  Similarity=0.216  Sum_probs=93.8

Q ss_pred             ccccCeEEEEEEEcC-CCcEEEEEEecCC---CcccHHHHHHHHH------hccccceecchHH--HHHHhhccccCCCc
Q 006915          413 LGKGGFGPVYKAKFP-GGQQIAVKRLSSA---SGQGLEEFKNEIE------TSNSNATIGANVK--AFVREMKTFSDPTL  480 (626)
Q Consensus       413 lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~---~~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~~~~~~~~l  480 (626)
                      ||+|+||.||+++.. +++.||||.++..   .......+.+|+.      +++++.+.+....  .++.+++++.++++
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L   80 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL   80 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence            799999999999885 5889999998743   2233445555554      3666665543322  23345566666655


Q ss_pred             cc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcch
Q 006915          481 SA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLAL  538 (626)
Q Consensus       481 ~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~  538 (626)
                      ..      .+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++.
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~HrDlkp~Nili~~~~~~kl~Dfg~~~  141 (312)
T cd05585          81 FHHLQREGRFDLSRARFYTAELLCALENLHKFN---VIYRDLKPENILLDYQGHIALCDFGLCK  141 (312)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHeEECCCCcEEEEECcccc
Confidence            32      3678888899999999999999998   9999999999999999999999999873

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.77  E-value=1e-18  Score=177.73  Aligned_cols=139  Identities=29%  Similarity=0.390  Sum_probs=106.2

Q ss_pred             cCHHHHHHhhcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCcccHHHHHHH------H-HhccccceecchHH
Q 006915          395 IDFESILAATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQGLEEFKNE------I-ETSNSNATIGANVK  466 (626)
Q Consensus       395 ~~~~~l~~~~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~e------~-~~~~~~~~~~~~~~  466 (626)
                      +.++.+..+.++|++.+.||+|+||.||++... +++.+|+|.+..... ...++.+|      + .+++++++.+.+..
T Consensus         8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   86 (286)
T cd06638           8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHD-IDEEIEAEYNILKALSDHPNVVKFYGMYYK   86 (286)
T ss_pred             EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccc-hHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence            445566678889999999999999999999874 588999999864321 12233333      3 36788887765421


Q ss_pred             -------HHHHhhccccCCCcc----------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcE
Q 006915          467 -------AFVREMKTFSDPTLS----------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNP  529 (626)
Q Consensus       467 -------~~~~~~~~~~~~~l~----------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~  529 (626)
                             .++..+++..++++.          ..+++..+..++.|++.||.|||+.+   |+||||||+||++++++.+
T Consensus        87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~  163 (286)
T cd06638          87 KDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNK---TIHRDVKGNNILLTTEGGV  163 (286)
T ss_pred             cccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCC---ccccCCCHHhEEECCCCCE
Confidence                   234556666655543          23567778889999999999999987   9999999999999999999


Q ss_pred             EEEecCcc
Q 006915          530 KISDFGLA  537 (626)
Q Consensus       530 kl~DFGla  537 (626)
                      ||+|||++
T Consensus       164 kl~dfg~~  171 (286)
T cd06638         164 KLVDFGVS  171 (286)
T ss_pred             EEccCCce
Confidence            99999987

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.77  E-value=1.3e-18  Score=177.85  Aligned_cols=131  Identities=21%  Similarity=0.265  Sum_probs=84.1

Q ss_pred             hcCccccccccccCeEEEEEEEcCC----CcEEEEEEecCCCcccHHHH-----------HHH------HHhccccceec
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFPG----GQQIAVKRLSSASGQGLEEF-----------KNE------IETSNSNATIG  462 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~~----~~~vAvK~l~~~~~~~~~~~-----------~~e------~~~~~~~~~~~  462 (626)
                      .+.|.+.+.||+|+||.||+|...+    +..+|+|...........+.           ..+      +.+.+++.+.+
T Consensus        11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~   90 (294)
T PHA02882         11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG   90 (294)
T ss_pred             CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence            3578999999999999999998754    34566665432221111110           000      11244444443


Q ss_pred             chHHHH------HHhhccccCCCc------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEE
Q 006915          463 ANVKAF------VREMKTFSDPTL------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPK  530 (626)
Q Consensus       463 ~~~~~~------~~~~~~~~~~~l------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~k  530 (626)
                      .+....      +..++... ..+      ....++.....|+.|++.||+|||+.+   |+||||||+|||++.++.+|
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---iiHrDiKp~Nill~~~~~~~  166 (294)
T PHA02882         91 CGSFKRCRMYYRFILLEKLV-ENTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHG---ISHGDIKPENIMVDGNNRGY  166 (294)
T ss_pred             eeeEecCCceEEEEEEehhc-cCHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCcEE
Confidence            221100      00111111 011      112356777889999999999999987   99999999999999999999


Q ss_pred             EEecCcch
Q 006915          531 ISDFGLAL  538 (626)
Q Consensus       531 l~DFGla~  538 (626)
                      |+|||+|+
T Consensus       167 l~DFGla~  174 (294)
T PHA02882        167 IIDYGIAS  174 (294)
T ss_pred             EEEcCCce
Confidence            99999973

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.77  E-value=1.9e-18  Score=175.73  Aligned_cols=129  Identities=32%  Similarity=0.357  Sum_probs=97.8

Q ss_pred             CccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCc---ccHHHHHHHHH------hccccceecchHH--HHHHhhc
Q 006915          406 NFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASG---QGLEEFKNEIE------TSNSNATIGANVK--AFVREMK  473 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~~  473 (626)
                      +|+..+.||+|+||.||++... +++.||||.+.....   .....+.+|+.      +++++.+.+....  .++..++
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence            3677899999999999999874 589999999974321   22234455544      3556655544332  2334555


Q ss_pred             cccCCCcc--------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          474 TFSDPTLS--------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       474 ~~~~~~l~--------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++.++++.        ..+++.....++.|++.||.|||+.+   |+||||||+||++++++.++|+|||++
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~Dfg~~  149 (285)
T cd05605          81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRER---IVYRDLKPENILLDDYGHIRISDLGLA  149 (285)
T ss_pred             ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHEEECCCCCEEEeeCCCc
Confidence            55555442        23678888999999999999999998   999999999999999999999999987

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.77  E-value=1.6e-18  Score=175.53  Aligned_cols=129  Identities=29%  Similarity=0.463  Sum_probs=97.7

Q ss_pred             CccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC-cccHHHHHHHHHh------ccccceecchHH--HHHHhhccc
Q 006915          406 NFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS-GQGLEEFKNEIET------SNSNATIGANVK--AFVREMKTF  475 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~~  475 (626)
                      .|+..+.||+|+||.||+|... +++.||||.+.... ....+.+.+|++.      ++++.+.+....  .++.++++.
T Consensus         5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06642           5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL   84 (277)
T ss_pred             HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence            3666789999999999999874 57899999987432 2334556666654      555555543332  223345555


Q ss_pred             cCCCccc-----CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          476 SDPTLSA-----LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       476 ~~~~l~~-----~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      .++++..     .+.+..+..++.|++.||.|||+.+   ++|+||+|+||++++++.+||+|||++
T Consensus        85 ~~~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---ivH~dl~p~ni~i~~~~~~~l~dfg~~  148 (277)
T cd06642          85 GGGSALDLLKPGPLEETYIATILREILKGLDYLHSER---KIHRDIKAANVLLSEQGDVKLADFGVA  148 (277)
T ss_pred             CCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCC---eeccCCChheEEEeCCCCEEEcccccc
Confidence            5555433     3678888999999999999999987   999999999999999999999999987

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.76  E-value=2.3e-18  Score=175.81  Aligned_cols=130  Identities=32%  Similarity=0.404  Sum_probs=102.9

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCcccHHHHHHHHH------hccccceecchHH--HHHHhhccc
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQGLEEFKNEIE------TSNSNATIGANVK--AFVREMKTF  475 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~~~~  475 (626)
                      +.|++.++||+|+||.||+|+.. +++.||+|.+........+.+.+|+.      +++++.+.+....  .++..++++
T Consensus        12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   91 (292)
T cd06644          12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC   91 (292)
T ss_pred             hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence            56888899999999999999885 48899999998665555666776664      3666666554322  233445555


Q ss_pred             cCCCcc-------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          476 SDPTLS-------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       476 ~~~~l~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      .++.+.       ..+++..+..++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||++
T Consensus        92 ~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~  157 (292)
T cd06644          92 PGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMK---IIHRDLKAGNVLLTLDGDIKLADFGVS  157 (292)
T ss_pred             CCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCC---eeecCCCcceEEEcCCCCEEEccCccc
Confidence            555442       34788999999999999999999987   999999999999999999999999986

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=99.76  E-value=1e-18  Score=164.25  Aligned_cols=132  Identities=30%  Similarity=0.375  Sum_probs=98.0

Q ss_pred             hhcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC----cccH----HHHHHHHHh-------ccccceecchHH
Q 006915          403 ATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS----GQGL----EEFKNEIET-------SNSNATIGANVK  466 (626)
Q Consensus       403 ~~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~----~~~~----~~~~~e~~~-------~~~~~~~~~~~~  466 (626)
                      .-++|...+.||+|..+.|-++.++ ++++.|+|++....    ....    +.-.+|+.+       ++++.+......
T Consensus        15 fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes   94 (411)
T KOG0599|consen   15 FYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYES   94 (411)
T ss_pred             HHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccC
Confidence            3456777789999999999998774 58899999986321    1112    223344443       555555443221


Q ss_pred             --HHHHhhccccCCCcccCC------CHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          467 --AFVREMKTFSDPTLSALL------HWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       467 --~~~~~~~~~~~~~l~~~l------~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                        .+..+++.+..+.+.++|      +.+...+|++|+..|++|||..+   ||||||||+|||+|++.++||+|||+|
T Consensus        95 ~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~---IVHRDLKpENILlddn~~i~isDFGFa  170 (411)
T KOG0599|consen   95 DAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARN---IVHRDLKPENILLDDNMNIKISDFGFA  170 (411)
T ss_pred             cchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhh---hhhcccChhheeeccccceEEecccee
Confidence              333455666667666654      57777899999999999999998   999999999999999999999999999

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.76  E-value=1.1e-18  Score=180.16  Aligned_cols=124  Identities=29%  Similarity=0.334  Sum_probs=92.1

Q ss_pred             ccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHHH-------HhccccceecchHH--HHHHhhccccC
Q 006915          411 NKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNEI-------ETSNSNATIGANVK--AFVREMKTFSD  477 (626)
Q Consensus       411 ~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e~-------~~~~~~~~~~~~~~--~~~~~~~~~~~  477 (626)
                      +.||+|+||.||+|+.. +++.||||.++...   ....+.+..|.       .+++++++.+....  .++.+++++.+
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g   80 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            36999999999999885 47899999997431   12222333332       23556655543221  23345666666


Q ss_pred             CCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          478 PTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       478 ~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +++..      .++......++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus        81 g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~a  143 (316)
T cd05592          81 GDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKG---IIYRDLKLDNVLLDKDGHIKIADFGMC  143 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHeEECCCCCEEEccCcCC
Confidence            65532      4667788889999999999999987   999999999999999999999999988

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.76  E-value=1.7e-18  Score=174.55  Aligned_cols=124  Identities=29%  Similarity=0.404  Sum_probs=94.2

Q ss_pred             ccccccCeEEEEEEEcCC---CcEEEEEEecCCCc-ccHHHHHHHHH------hccccceecchHH--HHHHhhccccCC
Q 006915          411 NKLGKGGFGPVYKAKFPG---GQQIAVKRLSSASG-QGLEEFKNEIE------TSNSNATIGANVK--AFVREMKTFSDP  478 (626)
Q Consensus       411 ~~lG~G~fG~Vy~~~~~~---~~~vAvK~l~~~~~-~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~~~~~~~  478 (626)
                      +.||+|+||.||+|...+   +..+|+|.++.... .....+.+|+.      +++++++++.+..  .++.+++++.++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g   80 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG   80 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence            369999999999998643   46799999875432 23345655644      4777777765443  334556666666


Q ss_pred             CcccC-----------CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          479 TLSAL-----------LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       479 ~l~~~-----------l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++...           +++.....++.|++.||+|||+.+   ++||||||+||+++.++.+||+|||++
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dlkp~nil~~~~~~~kL~dfg~~  147 (269)
T cd05087          81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN---FIHSDLALRNCLLTADLTVKIGDYGLS  147 (269)
T ss_pred             cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEECCcccc
Confidence            55432           345667789999999999999988   999999999999999999999999987

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.76  E-value=2e-18  Score=172.39  Aligned_cols=129  Identities=30%  Similarity=0.389  Sum_probs=98.2

Q ss_pred             CccccccccccCeEEEEEEEcC-CCcEEEEEEecCC--CcccHHHHHHHHH------hccccceecchHH--HHHHhhcc
Q 006915          406 NFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSA--SGQGLEEFKNEIE------TSNSNATIGANVK--AFVREMKT  474 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~--~~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~~~  474 (626)
                      +|+..+.||+|+||.||+|+.. +++.||+|.+...  ......++.+|++      +++++.+.+....  .++..+++
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY   80 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence            4677789999999999999874 5899999998642  2233455555554      3666666554433  22344555


Q ss_pred             ccCCCcc--------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          475 FSDPTLS--------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       475 ~~~~~l~--------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +.++++.        ..+++..+..++.|++.||.|||+.+   ++|+||||+||+++.++.+||+|||++
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~---i~h~dl~~~nili~~~~~~~l~df~~~  148 (256)
T cd08529          81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKK---ILHRDIKSLNLFLDAYDNVKIGDLGVA  148 (256)
T ss_pred             CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEeCCCCEEEcccccc
Confidence            5555443        34667888899999999999999987   999999999999999999999999986

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.76  E-value=2e-18  Score=172.34  Aligned_cols=127  Identities=34%  Similarity=0.540  Sum_probs=96.7

Q ss_pred             cccccccccCeEEEEEEEcCC-----CcEEEEEEecCCCcc-cHHHHHHHHHh------ccccceecchHH--HHHHhhc
Q 006915          408 SEANKLGKGGFGPVYKAKFPG-----GQQIAVKRLSSASGQ-GLEEFKNEIET------SNSNATIGANVK--AFVREMK  473 (626)
Q Consensus       408 ~~~~~lG~G~fG~Vy~~~~~~-----~~~vAvK~l~~~~~~-~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~  473 (626)
                      ++.+.||+|+||.||+++..+     +..||+|.+...... ....+..|+..      ++++.+++....  .+...++
T Consensus         2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e   81 (258)
T smart00219        2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVME   81 (258)
T ss_pred             cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEe
Confidence            456899999999999998854     488999999765433 45566666543      556666554332  2333445


Q ss_pred             cccCCCccc-------C-CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          474 TFSDPTLSA-------L-LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       474 ~~~~~~l~~-------~-l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +..++++..       . +++..+..++.|++.||.|||+.+   ++|+||||+||++++++.+||+|||++
T Consensus        82 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~---~~h~dl~~~nil~~~~~~~~l~dfg~~  150 (258)
T smart00219       82 YMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKN---FIHRDLAARNCLVGENLVVKISDFGLS  150 (258)
T ss_pred             ccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCC---eeecccccceEEEccCCeEEEcccCCc
Confidence            554444321       1 778888999999999999999997   999999999999999999999999998

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.76  E-value=3.4e-19  Score=178.43  Aligned_cols=170  Identities=18%  Similarity=0.280  Sum_probs=118.6

Q ss_pred             ccccccCeEEEEEEEcCC--------CcEEEEEEecCCCcccHHHHHHHHH------hccccceecchHH--HHHHhhcc
Q 006915          411 NKLGKGGFGPVYKAKFPG--------GQQIAVKRLSSASGQGLEEFKNEIE------TSNSNATIGANVK--AFVREMKT  474 (626)
Q Consensus       411 ~~lG~G~fG~Vy~~~~~~--------~~~vAvK~l~~~~~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~~~  474 (626)
                      +.||+|+||.||+|....        ...||+|.+........+++.+|+.      +++++.+.+....  ..+..+++
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   80 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY   80 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence            369999999999997632        2358899887544334445555543      4666666655432  23345566


Q ss_pred             ccCCCccc-------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCc--------EEEEecCcchh
Q 006915          475 FSDPTLSA-------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMN--------PKISDFGLALD  539 (626)
Q Consensus       475 ~~~~~l~~-------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~--------~kl~DFGla~~  539 (626)
                      ...+++..       .+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.        +|++|||++..
T Consensus        81 ~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~  157 (258)
T cd05078          81 VKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKG---LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISIT  157 (258)
T ss_pred             CCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEEEecccccccCCCceEEecccccccc
Confidence            65555432       3678889999999999999999987   999999999999987765        69999998721


Q ss_pred             ccc------------cccC------------------------C---------------------CCChHHHHHHHHHHH
Q 006915          540 MMD------------QKLH------------------------A---------------------SSKPNEILKCINVGL  562 (626)
Q Consensus       540 ~~~------------~~~~------------------------~---------------------~~~~~~~~~~~~~~~  562 (626)
                      ...            ++..                        .                     ..+......+.+++.
T Consensus       158 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  237 (258)
T cd05078         158 VLPKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFYEDRHQLPAPKWTELANLIN  237 (258)
T ss_pred             cCCchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHHHHccccCCCCCcHHHHHHHH
Confidence            110            0000                        0                     000011134667888


Q ss_pred             HhcccCCCCCCCHHHHHHHhc
Q 006915          563 LCVQEDPNDRPTMSDVVIMLG  583 (626)
Q Consensus       563 ~C~~~~p~~RPs~~~vl~~L~  583 (626)
                      .||+.+|.+||+++++++.|.
T Consensus       238 ~~l~~~p~~Rps~~~il~~l~  258 (258)
T cd05078         238 QCMDYEPDFRPSFRAIIRDLN  258 (258)
T ss_pred             HHhccChhhCCCHHHHHHhcC
Confidence            999999999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.76  E-value=2.2e-18  Score=176.36  Aligned_cols=128  Identities=28%  Similarity=0.396  Sum_probs=95.2

Q ss_pred             CccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCcc-----cHHHHHHHHH------hccccceecchHH--HHHHh
Q 006915          406 NFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQ-----GLEEFKNEIE------TSNSNATIGANVK--AFVRE  471 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~-----~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~  471 (626)
                      +|+..+.||+|+||.||+|... +++.||||.+......     ....+..|++      +++++.+.+....  .++.+
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV   80 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence            3677789999999999999874 5899999999754322     1223344443      4566655544332  11223


Q ss_pred             hccccCCCcc-------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          472 MKTFSDPTLS-------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       472 ~~~~~~~~l~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++++ .+++.       ..+++..+..++.||++||.|||+.+   |+|+||||+|||++.++.+||+|||++
T Consensus        81 ~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~  149 (298)
T cd07841          81 FEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNW---ILHRDLKPNNLLIASDGVLKLADFGLA  149 (298)
T ss_pred             Eccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCChhhEEEcCCCCEEEccceee
Confidence            3444 33321       24788899999999999999999998   999999999999999999999999988

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.76  E-value=2.1e-18  Score=175.97  Aligned_cols=139  Identities=33%  Similarity=0.426  Sum_probs=107.2

Q ss_pred             cCHHHHHHhhcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCcccHHHHHHHH-------HhccccceecchHH
Q 006915          395 IDFESILAATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQGLEEFKNEI-------ETSNSNATIGANVK  466 (626)
Q Consensus       395 ~~~~~l~~~~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~e~-------~~~~~~~~~~~~~~  466 (626)
                      +.++++..++++|.+.+.||+|+||.||++... +++.+|+|.+..... ....+.+|+       .++|++++.+.+..
T Consensus        12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~-~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~   90 (291)
T cd06639          12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISD-VDEEIEAEYNILQSLPNHPNVVKFYGMFYK   90 (291)
T ss_pred             hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccccc-HHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence            555667778899999999999999999999874 588999999875321 122333333       34667776665432


Q ss_pred             -------HHHHhhccccCCCcc----------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcE
Q 006915          467 -------AFVREMKTFSDPTLS----------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNP  529 (626)
Q Consensus       467 -------~~~~~~~~~~~~~l~----------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~  529 (626)
                             .++..++++.++++.          ..+.+..+..++.|++.||+|||+.+   |+|+||||+||++++++.+
T Consensus        91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~nili~~~~~~  167 (291)
T cd06639          91 ADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNR---IIHRDVKGNNILLTTEGGV  167 (291)
T ss_pred             ccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCCE
Confidence                   233455666555543          34678888999999999999999987   9999999999999999999


Q ss_pred             EEEecCcc
Q 006915          530 KISDFGLA  537 (626)
Q Consensus       530 kl~DFGla  537 (626)
                      ||+|||++
T Consensus       168 kl~dfg~~  175 (291)
T cd06639         168 KLVDFGVS  175 (291)
T ss_pred             EEeecccc
Confidence            99999987

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.76  E-value=2.3e-18  Score=172.16  Aligned_cols=124  Identities=31%  Similarity=0.433  Sum_probs=94.0

Q ss_pred             ccccccCeEEEEEEEcCC--C--cEEEEEEecCCCc-ccHHHHHHHHHh------ccccceecchHH-HHHHhhccccCC
Q 006915          411 NKLGKGGFGPVYKAKFPG--G--QQIAVKRLSSASG-QGLEEFKNEIET------SNSNATIGANVK-AFVREMKTFSDP  478 (626)
Q Consensus       411 ~~lG~G~fG~Vy~~~~~~--~--~~vAvK~l~~~~~-~~~~~~~~e~~~------~~~~~~~~~~~~-~~~~~~~~~~~~  478 (626)
                      +.||+|+||.||+|.+..  +  ..||||.+..... ...+.+.+|+..      ++++...+.... .+...+++...+
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~   80 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLTHPLMMVTELAPLG   80 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcCCeEEEEEEecCCC
Confidence            468999999999998743  3  3699999986554 455677777654      666666554332 112233444333


Q ss_pred             Ccc--------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          479 TLS--------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       479 ~l~--------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++.        ..+++.....++.|++.||+|||+.+   ++|+||||+||+++.++.+||+|||++
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~di~p~nil~~~~~~~kl~dfg~~  144 (257)
T cd05040          81 SLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKR---FIHRDLAARNILLASDDKVKIGDFGLM  144 (257)
T ss_pred             cHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCC---ccccccCcccEEEecCCEEEecccccc
Confidence            332        34788899999999999999999997   999999999999999999999999987

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.76  E-value=2.3e-18  Score=178.28  Aligned_cols=124  Identities=27%  Similarity=0.315  Sum_probs=93.3

Q ss_pred             ccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHHHH-------hccccceecchHH--HHHHhhccccC
Q 006915          411 NKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNEIE-------TSNSNATIGANVK--AFVREMKTFSD  477 (626)
Q Consensus       411 ~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e~~-------~~~~~~~~~~~~~--~~~~~~~~~~~  477 (626)
                      +.||+|+||.||+|+.. +++.||||.++...   ......+..|.+       +++++.+.+....  .++.+++++.+
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~   80 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG   80 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence            36999999999999875 47899999987532   222334444443       3455555443322  23455666666


Q ss_pred             CCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          478 PTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       478 ~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +++.      ..+++.....++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~Nill~~~~~~kL~Dfg~~  143 (321)
T cd05591          81 GDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHG---VIYRDLKLDNILLDAEGHCKLADFGMC  143 (321)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeecccc
Confidence            6553      23678888899999999999999998   999999999999999999999999987

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.76  E-value=8.5e-19  Score=181.70  Aligned_cols=125  Identities=27%  Similarity=0.280  Sum_probs=95.0

Q ss_pred             ccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHHHH------hccccceecchHH--HHHHhhccccCC
Q 006915          411 NKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNEIE------TSNSNATIGANVK--AFVREMKTFSDP  478 (626)
Q Consensus       411 ~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~~~~~~~  478 (626)
                      +.||+|+||.||+++.. +++.||+|.++...   ......+.+|+.      +++++.+.+....  .++.+++++.++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence            36999999999999874 58999999997532   222334445544      3566665543322  233556666666


Q ss_pred             Ccc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcch
Q 006915          479 TLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLAL  538 (626)
Q Consensus       479 ~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~  538 (626)
                      ++.      ..+++.....++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++.
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~~~  143 (323)
T cd05595          81 ELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK  143 (323)
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEEcCCCCEEecccHHhc
Confidence            653      34678888999999999999999998   9999999999999999999999999873

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.76  E-value=2e-18  Score=173.16  Aligned_cols=130  Identities=28%  Similarity=0.406  Sum_probs=98.8

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC-----cccHHHHHHHHHh------ccccceecchHH--HHHH
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS-----GQGLEEFKNEIET------SNSNATIGANVK--AFVR  470 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~-----~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~  470 (626)
                      ++|...+.||+|+||.||++... +++.||+|.+....     ......+.+|++.      ++++++.+....  .+..
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~   81 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI   81 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence            56888999999999999999874 58999999986432     1123456666553      666666654433  2223


Q ss_pred             hhccccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          471 EMKTFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       471 ~~~~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      .+++..++++..      .+++.....++.|++.||.|||+.+   |+||||||+||++++++.+||+|||++
T Consensus        82 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nilv~~~~~~~l~dfg~~  151 (263)
T cd06625          82 FMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGAS  151 (263)
T ss_pred             EEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccc
Confidence            345555554432      3567788899999999999999998   999999999999999999999999987

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.76  E-value=2.7e-18  Score=174.28  Aligned_cols=131  Identities=27%  Similarity=0.433  Sum_probs=95.7

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC-cccHHHHHHHHH-------hccccceecchHH--HHHHhhc
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS-GQGLEEFKNEIE-------TSNSNATIGANVK--AFVREMK  473 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~e~~-------~~~~~~~~~~~~~--~~~~~~~  473 (626)
                      ++|++.+.||+|+||.||+++.. +++.||||+++... .....++..|+.       +++++++.+....  .++..++
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e   80 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME   80 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence            46888899999999999999885 58999999987542 222334444433       3677776654322  1111122


Q ss_pred             cccC---------CCcccCCCHHHHHHHHHHHHHHHHHHHhC-CCCceEecCCCCCCeEECCCCcEEEEecCcch
Q 006915          474 TFSD---------PTLSALLHWEMRFNIIIGIARGLLYLHQD-SRLRIIHRDLKTSNILLDQEMNPKISDFGLAL  538 (626)
Q Consensus       474 ~~~~---------~~l~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~  538 (626)
                      ++.+         ......+++.....++.||+.||+|||++ +   ++||||||+|||++.++.+||+|||++.
T Consensus        81 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~---i~h~dlkp~nil~~~~~~~kl~dfg~~~  152 (283)
T cd06617          81 VMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLS---VIHRDVKPSNVLINRNGQVKLCDFGISG  152 (283)
T ss_pred             hhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeeccccc
Confidence            2211         01123578899999999999999999986 5   9999999999999999999999999873

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.76  E-value=5.2e-19  Score=176.95  Aligned_cols=128  Identities=34%  Similarity=0.471  Sum_probs=97.1

Q ss_pred             ccccccccccCeEEEEEEEcCC-CcEEEEEEecCCCcccHH--------HHHHHHHhccccceecchHH--HHHHhhccc
Q 006915          407 FSEANKLGKGGFGPVYKAKFPG-GQQIAVKRLSSASGQGLE--------EFKNEIETSNSNATIGANVK--AFVREMKTF  475 (626)
Q Consensus       407 f~~~~~lG~G~fG~Vy~~~~~~-~~~vAvK~l~~~~~~~~~--------~~~~e~~~~~~~~~~~~~~~--~~~~~~~~~  475 (626)
                      |+..+.||+|+||.||+++... ++.+|+|.+.........        .+.+.+.++++++..+....  .++..++++
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~   80 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC   80 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence            5677899999999999999854 678999999865432221        23344455677666554322  222334444


Q ss_pred             cCCCc------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          476 SDPTL------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       476 ~~~~l------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ..+++      ...+++..+..++.|+++||.|||+.+   |+|+||||+|||+++++.++|+|||.+
T Consensus        81 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~---i~H~dikp~NIl~~~~~~~~l~Dfg~~  145 (260)
T PF00069_consen   81 PGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKG---IVHRDIKPENILLDENGEVKLIDFGSS  145 (260)
T ss_dssp             TTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTT---EEESSBSGGGEEESTTSEEEESSGTTT
T ss_pred             cccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccccccccccc
Confidence            44444      245678899999999999999999998   999999999999999999999999987

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.76  E-value=7.8e-19  Score=185.34  Aligned_cols=132  Identities=24%  Similarity=0.265  Sum_probs=101.3

Q ss_pred             hhcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHHHH------hccccceecchHH--HHHH
Q 006915          403 ATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNEIE------TSNSNATIGANVK--AFVR  470 (626)
Q Consensus       403 ~~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~  470 (626)
                      ..++|++.+.||+|+||.||+++.. +++.||||.+....   ......+.+|+.      +++++.+.+....  .++.
T Consensus        41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l  120 (370)
T cd05596          41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM  120 (370)
T ss_pred             CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence            4567999999999999999999885 58899999996421   122333455544      3666666544332  2345


Q ss_pred             hhccccCCCcccC-----CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          471 EMKTFSDPTLSAL-----LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       471 ~~~~~~~~~l~~~-----l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +++++.++++..+     ++......++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus       121 v~Ey~~gg~L~~~l~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~kL~DfG~~  189 (370)
T cd05596         121 VMEYMPGGDLVNLMSNYDIPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTC  189 (370)
T ss_pred             EEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEcCCCCEEEEeccce
Confidence            5666666665443     566777889999999999999998   999999999999999999999999987

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.76  E-value=3.8e-19  Score=188.45  Aligned_cols=133  Identities=24%  Similarity=0.310  Sum_probs=103.0

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHHHH------hccccceecchHH--HHHHhh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNEIE------TSNSNATIGANVK--AFVREM  472 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~  472 (626)
                      ++|.+.+.||+|+||.||+++.. +++.||||++....   ......+.+|++      +++++++.+....  .++.++
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~   80 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM   80 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence            46888899999999999999874 68999999986431   223345555654      3666766654333  344566


Q ss_pred             ccccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhc
Q 006915          473 KTFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM  540 (626)
Q Consensus       473 ~~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~  540 (626)
                      +++.++++..      .+++.....++.|++.||+|||+.+   |+||||||+|||++.++.+||+|||++..+
T Consensus        81 E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kl~DfGla~~~  151 (377)
T cd05629          81 EFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLG---FIHRDIKPDNILIDRGGHIKLSDFGLSTGF  151 (377)
T ss_pred             eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEEeeccccccc
Confidence            7776666543      3567778889999999999999998   999999999999999999999999999643

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.76  E-value=2e-18  Score=177.65  Aligned_cols=131  Identities=27%  Similarity=0.368  Sum_probs=99.7

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC-cccHHHHHHHHHh------ccccceecchHH--HHHHhhcc
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS-GQGLEEFKNEIET------SNSNATIGANVK--AFVREMKT  474 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~  474 (626)
                      ++|++.+.||+|+||.||+++.. ++..+|+|.+.... .....++.+|++.      ++++++.+.+..  .+...+++
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey   80 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH   80 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence            36888899999999999999874 57889999987532 2233456666553      677777765432  22344555


Q ss_pred             ccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          475 FSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       475 ~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ..++++..      .+++.....++.|++.||.|||+..  +++||||||+|||++.++.+||+|||++
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~  147 (308)
T cd06615          81 MDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVS  147 (308)
T ss_pred             cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecCCcEEEccCCCc
Confidence            55555533      3577888899999999999999741  3999999999999999999999999987

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.76  E-value=1.5e-18  Score=195.43  Aligned_cols=132  Identities=25%  Similarity=0.322  Sum_probs=100.2

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCc---ccHHHHHHHHH------hccccceecchHH--HHHHhh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASG---QGLEEFKNEIE------TSNSNATIGANVK--AFVREM  472 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~  472 (626)
                      ++|++.++||+|+||.||+|+.. +++.||||++.....   ...++|.+|++      ++|++.+.+.+..  ..+..+
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM   81 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM   81 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence            57889999999999999999875 589999999975321   22445666665      3677777654332  222344


Q ss_pred             ccccCCCccc-----------------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecC
Q 006915          473 KTFSDPTLSA-----------------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFG  535 (626)
Q Consensus       473 ~~~~~~~l~~-----------------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFG  535 (626)
                      +++.++++..                 .+++...++++.||++||+|||+.+   |+||||||+|||++.++.+||+|||
T Consensus        82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~G---IIHRDLKPeNILLd~dg~vKLiDFG  158 (932)
T PRK13184         82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKG---VLHRDLKPDNILLGLFGEVVILDWG  158 (932)
T ss_pred             EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchheEEEcCCCCEEEEecC
Confidence            5555544432                 2345667889999999999999987   9999999999999999999999999


Q ss_pred             cchh
Q 006915          536 LALD  539 (626)
Q Consensus       536 la~~  539 (626)
                      ++..
T Consensus       159 LAk~  162 (932)
T PRK13184        159 AAIF  162 (932)
T ss_pred             ccee
Confidence            8843

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.76  E-value=1.9e-18  Score=179.57  Aligned_cols=124  Identities=23%  Similarity=0.277  Sum_probs=94.9

Q ss_pred             ccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHHHH-------hccccceecchHH--HHHHhhccccC
Q 006915          411 NKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNEIE-------TSNSNATIGANVK--AFVREMKTFSD  477 (626)
Q Consensus       411 ~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e~~-------~~~~~~~~~~~~~--~~~~~~~~~~~  477 (626)
                      +.||+|+||.||+++.. +++.||+|.++...   ......+..|+.       +++++.+.+....  .++.+++++.+
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~   80 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG   80 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence            46999999999999875 58899999997532   222334444433       4666666654322  23345666666


Q ss_pred             CCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          478 PTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       478 ~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +++.      ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dikp~Nili~~~~~~kL~DfG~~  143 (329)
T cd05618          81 GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMC  143 (329)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCCEEEeeCCcc
Confidence            6553      34778888999999999999999998   999999999999999999999999987

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.76  E-value=3.4e-18  Score=180.36  Aligned_cols=131  Identities=27%  Similarity=0.325  Sum_probs=97.6

Q ss_pred             hhcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC--cccHHHHHHHHH------hccccceecchHH-------
Q 006915          403 ATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS--GQGLEEFKNEIE------TSNSNATIGANVK-------  466 (626)
Q Consensus       403 ~~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~e~~------~~~~~~~~~~~~~-------  466 (626)
                      ..++|...+.||+|+||.||++... .++.||||++....  ......+.+|+.      ++|++.+.+....       
T Consensus        22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~  101 (364)
T cd07875          22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF  101 (364)
T ss_pred             hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence            3568999999999999999999874 58899999997532  223344555544      3666665543221       


Q ss_pred             -HHHHhhccccCCCc----ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          467 -AFVREMKTFSDPTL----SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       467 -~~~~~~~~~~~~~l----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                       .++.+++++.. .+    ...+++..+..++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus       102 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a  173 (364)
T cd07875         102 QDVYIVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA  173 (364)
T ss_pred             CeEEEEEeCCCC-CHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEECCCCcEEEEeCCCc
Confidence             11233444432 22    223678888899999999999999998   999999999999999999999999998

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.76  E-value=1.6e-18  Score=175.75  Aligned_cols=131  Identities=31%  Similarity=0.398  Sum_probs=103.8

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCcccHHHHHHHHH------hccccceecchHH--HHHHhhcc
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQGLEEFKNEIE------TSNSNATIGANVK--AFVREMKT  474 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~~~  474 (626)
                      .++|++.+.||+|+||.||+|... +++.||+|.+........+.|.+|++      +++++++.+....  .++..+++
T Consensus         4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (280)
T cd06611           4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF   83 (280)
T ss_pred             hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence            457888999999999999999884 58899999997655555566766654      4666666654432  22344555


Q ss_pred             ccCCCcc-------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          475 FSDPTLS-------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       475 ~~~~~l~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +.++++.       ..+++.....++.|++.||.|||+.+   |+|+||||+||+++.++.+||+|||++
T Consensus        84 ~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~nili~~~~~~~l~d~g~~  150 (280)
T cd06611          84 CDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHK---VIHRDLKAGNILLTLDGDVKLADFGVS  150 (280)
T ss_pred             cCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEECCCCCEEEccCccc
Confidence            5555442       34678888999999999999999998   999999999999999999999999986

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.75  E-value=3.4e-18  Score=171.33  Aligned_cols=132  Identities=26%  Similarity=0.407  Sum_probs=96.8

Q ss_pred             CccccccccccCeEEEEEEEc-CCCcEEEEEEecCC--CcccHHHHHHHHH------hccccceecchHH----HHHHhh
Q 006915          406 NFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSA--SGQGLEEFKNEIE------TSNSNATIGANVK----AFVREM  472 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~--~~~~~~~~~~e~~------~~~~~~~~~~~~~----~~~~~~  472 (626)
                      +|++.+.||.|+||.||++.. .+++.||+|.+...  .....+.+..|++      +++++.+.+....    .++..+
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM   80 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence            467778999999999999987 45889999998743  2233445666654      4666666553321    122334


Q ss_pred             ccccCCCc----------ccCCCHHHHHHHHHHHHHHHHHHHhCC--CCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          473 KTFSDPTL----------SALLHWEMRFNIIIGIARGLLYLHQDS--RLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       473 ~~~~~~~l----------~~~l~~~~~~~i~~~ia~gL~yLH~~~--~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +++.++++          ...+++...+.++.||+.||.|||..+  ...++|+||||+||+++.++.+||+|||++
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~  157 (265)
T cd08217          81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLA  157 (265)
T ss_pred             hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEeccccc
Confidence            44444443          234678889999999999999999332  234999999999999999999999999987

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.75  E-value=3.3e-18  Score=170.84  Aligned_cols=129  Identities=23%  Similarity=0.357  Sum_probs=95.7

Q ss_pred             CccccccccccCeEEEEEEEcC-CCcEEEEEEecCC-CcccHHHHHHHH------HhccccceecchHH--HHHHhhccc
Q 006915          406 NFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSA-SGQGLEEFKNEI------ETSNSNATIGANVK--AFVREMKTF  475 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~-~~~~~~~~~~e~------~~~~~~~~~~~~~~--~~~~~~~~~  475 (626)
                      +|++.+.||+|+||.||+++.. +++.+|+|.++.. .....+.+.+|+      .++|++.+.+....  .++..+++.
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC   80 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence            4677899999999999999874 5889999998642 222334455554      34666665543221  222334444


Q ss_pred             cCCCcc--------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          476 SDPTLS--------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       476 ~~~~l~--------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      .++++.        ..++....+.++.|++.||.|||+.+   |+|+||||+|||+++++.++|+|||++
T Consensus        81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~  147 (255)
T cd08219          81 DGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKR---VLHRDIKSKNIFLTQNGKVKLGDFGSA  147 (255)
T ss_pred             CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEECCCCcEEEcccCcc
Confidence            444332        23677888899999999999999998   999999999999999999999999987

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.75  E-value=1.6e-18  Score=182.84  Aligned_cols=137  Identities=22%  Similarity=0.276  Sum_probs=104.1

Q ss_pred             HHHHhhcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCC---CcccHHHHHHHHH------hccccceecchHH--
Q 006915          399 SILAATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSA---SGQGLEEFKNEIE------TSNSNATIGANVK--  466 (626)
Q Consensus       399 ~l~~~~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~---~~~~~~~~~~e~~------~~~~~~~~~~~~~--  466 (626)
                      ++....++|++.+.||+|+||.||+++.. +++.||+|.+.+.   .......+.+|+.      +++++++.+....  
T Consensus        37 ~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~  116 (370)
T cd05621          37 KLQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDK  116 (370)
T ss_pred             hcCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC
Confidence            33445678999999999999999999985 5889999998642   1122334555544      4666666654332  


Q ss_pred             HHHHhhccccCCCcccC-----CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcch
Q 006915          467 AFVREMKTFSDPTLSAL-----LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLAL  538 (626)
Q Consensus       467 ~~~~~~~~~~~~~l~~~-----l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~  538 (626)
                      .++.+++++.++++..+     ++......++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||++.
T Consensus       117 ~~~lv~Ey~~gg~L~~~l~~~~~~~~~~~~~~~qil~aL~~LH~~~---IvHrDLKp~NILl~~~~~~kL~DFG~a~  190 (370)
T cd05621         117 YLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMG---LIHRDVKPDNMLLDKHGHLKLADFGTCM  190 (370)
T ss_pred             EEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEEecccce
Confidence            23455666666665433     567778889999999999999998   9999999999999999999999999883

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=99.75  E-value=9.1e-19  Score=171.77  Aligned_cols=130  Identities=28%  Similarity=0.427  Sum_probs=91.8

Q ss_pred             hcCccccccccccCeEEEEEEEc-CCCcEEEEEEecC--CCcccHHHHHHHHH------hccccceecchHH-------H
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSS--ASGQGLEEFKNEIE------TSNSNATIGANVK-------A  467 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~--~~~~~~~~~~~e~~------~~~~~~~~~~~~~-------~  467 (626)
                      ...|...+.||+|+||.|..+.. .+|+.||||++..  ......++-.+|++      |.|++.+......       .
T Consensus        21 ~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~D  100 (359)
T KOG0660|consen   21 PRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFND  100 (359)
T ss_pred             cceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccce
Confidence            34555568999999999999987 4689999999973  23334444455544      4666555432211       0


Q ss_pred             HHHhhccccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          468 FVREMKTFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       468 ~~~~~~~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++.+.+.+ ..++.      +.|......-++.|+++||.|+|+.+   |+||||||+|+|++.+-.+||+|||||
T Consensus       101 vYiV~elM-etDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAn---ViHRDLKPsNll~n~~c~lKI~DFGLA  172 (359)
T KOG0660|consen  101 VYLVFELM-ETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSAN---VIHRDLKPSNLLLNADCDLKICDFGLA  172 (359)
T ss_pred             eEEehhHH-hhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhccc---ccccccchhheeeccCCCEEeccccce
Confidence            11111111 12222      22556666678999999999999998   999999999999999999999999999

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.75  E-value=3e-19  Score=188.35  Aligned_cols=133  Identities=23%  Similarity=0.305  Sum_probs=102.1

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHHHH------hccccceecchHH--HHHHhh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNEIE------TSNSNATIGANVK--AFVREM  472 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~  472 (626)
                      ++|++.+.||+|+||.||+++.. +++.||||++....   ......+.+|+.      +++++.+.+....  .++.++
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM   80 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence            46888999999999999999885 58999999997431   122334444544      4666666544332  233456


Q ss_pred             ccccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhc
Q 006915          473 KTFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM  540 (626)
Q Consensus       473 ~~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~  540 (626)
                      +++.++++..      .+++.....++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||++..+
T Consensus        81 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~  151 (364)
T cd05599          81 EYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLG---YIHRDIKPDNLLLDAKGHIKLSDFGLCTGL  151 (364)
T ss_pred             CCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEeecccceec
Confidence            6666655533      4678888999999999999999998   999999999999999999999999998654

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.75  E-value=1.7e-18  Score=178.95  Aligned_cols=124  Identities=29%  Similarity=0.352  Sum_probs=92.7

Q ss_pred             ccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHHHH-------hccccceecchHH--HHHHhhccccC
Q 006915          411 NKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNEIE-------TSNSNATIGANVK--AFVREMKTFSD  477 (626)
Q Consensus       411 ~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e~~-------~~~~~~~~~~~~~--~~~~~~~~~~~  477 (626)
                      +.||+|+||.||+|+.. +++.||||.++...   ......+..|..       +++++++.+....  .++.+++++.+
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~   80 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence            46999999999999885 58899999997532   122333334432       3455555443222  23345666666


Q ss_pred             CCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          478 PTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       478 ~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +++.      ..+++.....++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus        81 g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nil~~~~~~~kl~Dfg~~  143 (316)
T cd05620          81 GDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKG---IIYRDLKLDNVMLDRDGHIKIADFGMC  143 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEeCccCCC
Confidence            6553      34678888899999999999999998   999999999999999999999999987

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.75  E-value=1.9e-18  Score=178.77  Aligned_cols=124  Identities=31%  Similarity=0.297  Sum_probs=94.1

Q ss_pred             ccccccCeEEEEEEEc----CCCcEEEEEEecCCCc--ccHHHHHHHHH------hccccceecchHH--HHHHhhcccc
Q 006915          411 NKLGKGGFGPVYKAKF----PGGQQIAVKRLSSASG--QGLEEFKNEIE------TSNSNATIGANVK--AFVREMKTFS  476 (626)
Q Consensus       411 ~~lG~G~fG~Vy~~~~----~~~~~vAvK~l~~~~~--~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~~~~~  476 (626)
                      +.||+|+||.||+++.    .+++.||||++.....  .....+..|++      ++|++++.+....  .++.+++++.
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   81 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR   81 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence            5799999999999875    3588999999975321  12233444443      4777776654332  2334556666


Q ss_pred             CCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          477 DPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       477 ~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++++.      ..+++.....++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus        82 ~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~  145 (318)
T cd05582          82 GGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLS  145 (318)
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHeEECCCCcEEEeeccCC
Confidence            55542      34778889999999999999999998   999999999999999999999999987

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.75  E-value=2.2e-18  Score=175.19  Aligned_cols=130  Identities=27%  Similarity=0.377  Sum_probs=96.6

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCc--ccHHHHHHHHHh------ccccceecchHH--HHHHhhc
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASG--QGLEEFKNEIET------SNSNATIGANVK--AFVREMK  473 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~--~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~  473 (626)
                      ++|+..+.||+|+||.||+|... +++.||+|++.....  ...+.+.+|++.      ++++++.+.+..  .++..++
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE   80 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence            46788899999999999999985 489999999864322  223456666554      444444433222  1223344


Q ss_pred             cccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          474 TFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       474 ~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++.++.+.      ..+++..++.++.||+.||.|||+.+   |+|+||+|+||++++++.+||+|||++
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~h~~l~p~ni~~~~~~~~~l~dfg~~  147 (286)
T cd07846          81 FVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFA  147 (286)
T ss_pred             cCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCcEEEEeeeee
Confidence            44433322      23789999999999999999999987   999999999999999999999999987

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.75  E-value=5.4e-18  Score=169.42  Aligned_cols=129  Identities=27%  Similarity=0.363  Sum_probs=96.3

Q ss_pred             CccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC--cccHHHHHHHHH------hccccceecchHH---HHHHhhc
Q 006915          406 NFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS--GQGLEEFKNEIE------TSNSNATIGANVK---AFVREMK  473 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~e~~------~~~~~~~~~~~~~---~~~~~~~  473 (626)
                      +|++.+.||+|+||.||+++.. +++.||||++....  ....+.+.+|++      +++++.+.+....   .++..++
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e   80 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG   80 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence            4778899999999999999874 47899999987432  223344555554      3555555443211   1223344


Q ss_pred             cccCCCc--------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          474 TFSDPTL--------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       474 ~~~~~~l--------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +..++++        ...+++.++..++.+++.||+|||+.+   |+|+||||+||+++.++.+||+|||++
T Consensus        81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~---i~H~di~p~nil~~~~~~~~l~df~~~  149 (257)
T cd08223          81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKH---ILHRDLKTQNVFLTRTNIIKVGDLGIA  149 (257)
T ss_pred             ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCchhEEEecCCcEEEecccce
Confidence            4444433        234788899999999999999999998   999999999999999999999999987

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.75  E-value=3.4e-18  Score=173.91  Aligned_cols=129  Identities=26%  Similarity=0.426  Sum_probs=96.0

Q ss_pred             CccccccccccCeEEEEEEEcC-CCcEEEEEEecCC-CcccHHHHHHHHHh------ccccceecchHH--HHHHhhccc
Q 006915          406 NFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSA-SGQGLEEFKNEIET------SNSNATIGANVK--AFVREMKTF  475 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~-~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~~  475 (626)
                      +|++.+.||+|+||.||++... .++.||+|.+... .......+.+|++.      ++++.+.+....  .++..+++.
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   81 (286)
T cd06622           2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM   81 (286)
T ss_pred             hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence            5777899999999999999885 6899999998743 22334566666554      344444432221  122234444


Q ss_pred             cCCCcc---------cCCCHHHHHHHHHHHHHHHHHHHhC-CCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          476 SDPTLS---------ALLHWEMRFNIIIGIARGLLYLHQD-SRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       476 ~~~~l~---------~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      .++++.         ..+++..+..++.+++.||.|||+. +   |+|+||||+||+++.++.+||+|||++
T Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~  150 (286)
T cd06622          82 DAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHN---IIHRDVKPTNVLVNGNGQVKLCDFGVS  150 (286)
T ss_pred             CCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCC---EeeCCCCHHHEEECCCCCEEEeecCCc
Confidence            444332         2578889999999999999999974 5   999999999999999999999999987

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.75  E-value=2.6e-18  Score=178.13  Aligned_cols=124  Identities=31%  Similarity=0.382  Sum_probs=92.8

Q ss_pred             ccccccCeEEEEEEEc----CCCcEEEEEEecCCC----cccHHHHHHHHH------hccccceecchHH--HHHHhhcc
Q 006915          411 NKLGKGGFGPVYKAKF----PGGQQIAVKRLSSAS----GQGLEEFKNEIE------TSNSNATIGANVK--AFVREMKT  474 (626)
Q Consensus       411 ~~lG~G~fG~Vy~~~~----~~~~~vAvK~l~~~~----~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~~~  474 (626)
                      +.||+|+||.||+++.    ..++.||||.++...    ......+.+|+.      ++|++.+.+....  .++..+++
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~   81 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY   81 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence            6899999999999975    347899999987421    122233444543      4666666544332  23345566


Q ss_pred             ccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          475 FSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       475 ~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +.++++..      .+.+.....++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~  147 (323)
T cd05584          82 LSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQG---IIYRDLKPENILLDAQGHVKLTDFGLC  147 (323)
T ss_pred             CCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEeeCcCC
Confidence            66655533      3566777889999999999999998   999999999999999999999999987

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.75  E-value=3.9e-18  Score=160.45  Aligned_cols=128  Identities=27%  Similarity=0.449  Sum_probs=91.8

Q ss_pred             cccccccccCeEEEEEEEcCC-CcEEEEEEecCCC-cccHHHHHHHHHh-------ccccceecchHH----HHHHhhc-
Q 006915          408 SEANKLGKGGFGPVYKAKFPG-GQQIAVKRLSSAS-GQGLEEFKNEIET-------SNSNATIGANVK----AFVREMK-  473 (626)
Q Consensus       408 ~~~~~lG~G~fG~Vy~~~~~~-~~~vAvK~l~~~~-~~~~~~~~~e~~~-------~~~~~~~~~~~~----~~~~~~~-  473 (626)
                      +....||.|..|.|++++++. |..+|||.+.... ....++++..+.+       +-+|+.+|+.+.    .+...+. 
T Consensus        95 ~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs  174 (391)
T KOG0983|consen   95 ENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMS  174 (391)
T ss_pred             hhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHH
Confidence            345689999999999999864 8999999998643 3344556665554       556777776543    1111111 


Q ss_pred             ccc---CCCcccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          474 TFS---DPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       474 ~~~---~~~l~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ...   -......+++.-.-++...+.+||.||.++.  .|||||+||+|||+|+.|++||+|||++
T Consensus       175 ~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIs  239 (391)
T KOG0983|consen  175 TCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGIS  239 (391)
T ss_pred             HHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeeccccc
Confidence            000   1112233555556678889999999998865  5999999999999999999999999998

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.75  E-value=3.3e-18  Score=175.03  Aligned_cols=130  Identities=25%  Similarity=0.397  Sum_probs=101.9

Q ss_pred             cCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCCcccHHHHHHHHH------hccccceecchHH--HHHHhhccc
Q 006915          405 DNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQGLEEFKNEIE------TSNSNATIGANVK--AFVREMKTF  475 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~~~~  475 (626)
                      .+|+..+.||.|+||.||+|.. .+++.||||.+........+.+.+|+.      +++++.+.+....  .++..+++.
T Consensus        19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   98 (296)
T cd06655          19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL   98 (296)
T ss_pred             ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence            4688889999999999999986 468999999997654444556666654      3666666654332  222344555


Q ss_pred             cCCCccc-----CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          476 SDPTLSA-----LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       476 ~~~~l~~-----~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      .++++..     .+++.++..++.|++.||+|||+.+   ++|+||||+||+++.++.+||+|||++
T Consensus        99 ~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~~---i~H~dL~p~Nili~~~~~~kl~dfg~~  162 (296)
T cd06655          99 AGGSLTDVVTETCMDEAQIAAVCRECLQALEFLHANQ---VIHRDIKSDNVLLGMDGSVKLTDFGFC  162 (296)
T ss_pred             CCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccc
Confidence            5555432     4788999999999999999999998   999999999999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.75  E-value=2.6e-18  Score=174.41  Aligned_cols=139  Identities=31%  Similarity=0.449  Sum_probs=105.5

Q ss_pred             cCHHHHHHhhcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCcccHHHHHHHHH-------hccccceecchHH
Q 006915          395 IDFESILAATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQGLEEFKNEIE-------TSNSNATIGANVK  466 (626)
Q Consensus       395 ~~~~~l~~~~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~e~~-------~~~~~~~~~~~~~  466 (626)
                      .++.++..+.+.|++.+.||+|+||.||+|+.. +++.+|+|.+.... ....++..|+.       +++++++.+..+.
T Consensus         6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~   84 (282)
T cd06636           6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIK   84 (282)
T ss_pred             hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence            355566667788999999999999999999884 58899999986532 22234444433       4667776665432


Q ss_pred             --------HHHHhhccccCCCccc--------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEE
Q 006915          467 --------AFVREMKTFSDPTLSA--------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPK  530 (626)
Q Consensus       467 --------~~~~~~~~~~~~~l~~--------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~k  530 (626)
                              .++..++++..+++..        .+++..+..++.||+.||.|||+.+   |+|+||||+||++++++.+|
T Consensus        85 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dl~~~nili~~~~~~~  161 (282)
T cd06636          85 KSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHK---VIHRDIKGQNVLLTENAEVK  161 (282)
T ss_pred             ccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEE
Confidence                    2234455555544432        3567778889999999999999998   99999999999999999999


Q ss_pred             EEecCcc
Q 006915          531 ISDFGLA  537 (626)
Q Consensus       531 l~DFGla  537 (626)
                      |+|||++
T Consensus       162 l~dfg~~  168 (282)
T cd06636         162 LVDFGVS  168 (282)
T ss_pred             EeeCcch
Confidence            9999987

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.75  E-value=1.7e-18  Score=179.27  Aligned_cols=124  Identities=29%  Similarity=0.348  Sum_probs=93.0

Q ss_pred             ccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHHHH-------hccccceecchHH--HHHHhhccccC
Q 006915          411 NKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNEIE-------TSNSNATIGANVK--AFVREMKTFSD  477 (626)
Q Consensus       411 ~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e~~-------~~~~~~~~~~~~~--~~~~~~~~~~~  477 (626)
                      +.||+|+||.||+|+.. +++.||||.+....   ......+..|..       +++++.+.+....  .++.+++++.+
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~   80 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG   80 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence            36999999999999885 58899999987431   223334444433       3555555443222  23345666666


Q ss_pred             CCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          478 PTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       478 ~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +++.      ..+++..+..++.|++.||+|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus        81 g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~---ivH~dlkp~NIli~~~~~~kL~DfG~~  143 (320)
T cd05590          81 GDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMC  143 (320)
T ss_pred             chHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeeCCCC
Confidence            6553      24678888899999999999999998   999999999999999999999999987

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.75  E-value=3.4e-19  Score=188.99  Aligned_cols=131  Identities=23%  Similarity=0.254  Sum_probs=101.3

Q ss_pred             CccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHHHHh------ccccceecchHH--HHHHhhc
Q 006915          406 NFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNEIET------SNSNATIGANVK--AFVREMK  473 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~  473 (626)
                      .|...+.||+|+||+||+|+.. +++.||||++....   ......+.+|+++      ++++++.+....  .++.+++
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E   81 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence            5788899999999999999874 58899999997532   2233455666543      666666654332  3334566


Q ss_pred             cccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchh
Q 006915          474 TFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALD  539 (626)
Q Consensus       474 ~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~  539 (626)
                      ++.++++..      .+++.....++.||+.||+|||+.+   |+||||||+||||+.++.+||+|||++..
T Consensus        82 ~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDlKp~Nili~~~~~~kL~DFGl~~~  150 (381)
T cd05626          82 YIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMG---FIHRDIKPDNILIDLDGHIKLTDFGLCTG  150 (381)
T ss_pred             cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCcHHHEEECCCCCEEEeeCcCCcc
Confidence            666666543      3567777889999999999999988   99999999999999999999999999753

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.75  E-value=5.6e-18  Score=169.10  Aligned_cols=128  Identities=34%  Similarity=0.499  Sum_probs=99.8

Q ss_pred             cCccccccccccCeEEEEEEEcCC-CcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH--HHHHhhccc
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFPG-GQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK--AFVREMKTF  475 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~~-~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~~  475 (626)
                      ++|+..+.||+|+||.||+|...+ ++.+|+|.+.....  .+++.+|++.      ++++.+.+....  .++..+++.
T Consensus         3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~   80 (256)
T cd06612           3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYC   80 (256)
T ss_pred             ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecC
Confidence            578888999999999999999865 78999999975432  5566666553      566665554332  122334444


Q ss_pred             cCCCc-------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          476 SDPTL-------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       476 ~~~~l-------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      .+.++       ...+++.....++.|++.||.|||+.+   ++|+||+|+||++++++.+||+|||++
T Consensus        81 ~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~ni~~~~~~~~~l~dfg~~  146 (256)
T cd06612          81 GAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNK---KIHRDIKAGNILLNEEGQAKLADFGVS  146 (256)
T ss_pred             CCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEECCCCcEEEcccccc
Confidence            44433       234688999999999999999999987   999999999999999999999999987

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.75  E-value=7.7e-18  Score=171.41  Aligned_cols=128  Identities=28%  Similarity=0.437  Sum_probs=93.1

Q ss_pred             CccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCc--ccHHHHHHHH---------HhccccceecchHH-------
Q 006915          406 NFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASG--QGLEEFKNEI---------ETSNSNATIGANVK-------  466 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~--~~~~~~~~e~---------~~~~~~~~~~~~~~-------  466 (626)
                      +|++.+.||+|+||.||+|+.. +++.||+|.++....  .....+.+|+         .++|++++.+....       
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~   80 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET   80 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence            4777899999999999999875 588999999874321  1112222222         25677766654321       


Q ss_pred             HHHHhhccccCCCc--------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          467 AFVREMKTFSDPTL--------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       467 ~~~~~~~~~~~~~l--------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      .+...++++.. ++        ...+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus        81 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~kl~dfg~~  155 (288)
T cd07863          81 KVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGQVKLADFGLA  155 (288)
T ss_pred             eEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccCcc
Confidence            11222333221 21        123678889999999999999999998   999999999999999999999999987

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.75  E-value=1.3e-17  Score=174.33  Aligned_cols=132  Identities=28%  Similarity=0.369  Sum_probs=95.4

Q ss_pred             HhhcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCC--cccHHHHHHHHHh------ccccceecchHH------
Q 006915          402 AATDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSAS--GQGLEEFKNEIET------SNSNATIGANVK------  466 (626)
Q Consensus       402 ~~~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~--~~~~~~~~~e~~~------~~~~~~~~~~~~------  466 (626)
                      ...++|.+.+.||+|+||.||+|.. .+++.||||.+....  ......+.+|+..      +|++++.+....      
T Consensus        12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   91 (343)
T cd07878          12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN   91 (343)
T ss_pred             hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence            3456799999999999999999987 458899999987532  1233445556554      444444332211      


Q ss_pred             --HHHHhhccccCCCcc-----cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          467 --AFVREMKTFSDPTLS-----ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       467 --~~~~~~~~~~~~~l~-----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                        .++..++ +.+.++.     ..+++.....++.||+.||.|||+.+   |+||||||+|||+++++.+||+|||++
T Consensus        92 ~~~~~~~~~-~~~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Dfg~~  165 (343)
T cd07878          92 FNEVYLVTN-LMGADLNNIVKCQKLSDEHVQFLIYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLA  165 (343)
T ss_pred             cCcEEEEee-cCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eecccCChhhEEECCCCCEEEcCCccc
Confidence              0011111 1122222     24778888999999999999999998   999999999999999999999999987

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.75  E-value=5.6e-18  Score=170.70  Aligned_cols=123  Identities=21%  Similarity=0.371  Sum_probs=92.4

Q ss_pred             cccccCeEEEEEEEcCC---CcEEEEEEecCCC-cccHHHHHHHHH------hccccceecchHH--HHHHhhccccCCC
Q 006915          412 KLGKGGFGPVYKAKFPG---GQQIAVKRLSSAS-GQGLEEFKNEIE------TSNSNATIGANVK--AFVREMKTFSDPT  479 (626)
Q Consensus       412 ~lG~G~fG~Vy~~~~~~---~~~vAvK~l~~~~-~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~~~~~~~~  479 (626)
                      +||+|+||.||+|+..+   ...+++|.+.... ....+.|.+|+.      +++++++++.+..  .++.+++++.+++
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~   81 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD   81 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence            69999999999997643   2356777776433 234456777654      4777777776553  3345566666665


Q ss_pred             cccC----------CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          480 LSAL----------LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       480 l~~~----------l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +...          +.+.....++.||+.||+|||+.+   ++||||||+|||++.++.+||+|||++
T Consensus        82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nil~~~~~~~~l~Dfg~~  146 (268)
T cd05086          82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN---FLHSDLALRNCFLTSDLTVKVGDYGIG  146 (268)
T ss_pred             HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC---eeccCCccceEEEcCCccEEecccccc
Confidence            5433          334556789999999999999987   999999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.75  E-value=3.6e-18  Score=173.72  Aligned_cols=128  Identities=32%  Similarity=0.361  Sum_probs=94.0

Q ss_pred             ccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHHHHh------ccccceecchHH--HHHHhhcc
Q 006915          407 FSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNEIET------SNSNATIGANVK--AFVREMKT  474 (626)
Q Consensus       407 f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~  474 (626)
                      |+..+.||+|+||+||+|... +++.||+|.+....   ......+.+|++.      .+++.+.+....  .++..+++
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI   81 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence            566789999999999999874 58899999987432   1223345556544      444444332221  12233444


Q ss_pred             ccCCCcc--------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          475 FSDPTLS--------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       475 ~~~~~l~--------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ..++++.        ..+++.....++.|++.||.|||+.+   |+||||||+|||+++++.+||+|||++
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~---iiH~dikp~Nili~~~~~~kl~Dfg~~  149 (285)
T cd05632          82 MNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHREN---TVYRDLKPENILLDDYGHIRISDLGLA  149 (285)
T ss_pred             ccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEECCCCCEEEecCCcc
Confidence            4444332        24788899999999999999999988   999999999999999999999999987

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.75  E-value=5.5e-19  Score=187.21  Aligned_cols=131  Identities=22%  Similarity=0.293  Sum_probs=100.2

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHHHH------hccccceecchHH--HHHHhh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNEIE------TSNSNATIGANVK--AFVREM  472 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~  472 (626)
                      ++|++.+.||+|+||.||+++.. +++.||||.+....   ......+.+|++      +++++++......  .++.++
T Consensus         1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (376)
T cd05598           1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM   80 (376)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence            36888999999999999999874 58999999986432   122344555544      4666666543322  334556


Q ss_pred             ccccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcch
Q 006915          473 KTFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLAL  538 (626)
Q Consensus       473 ~~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~  538 (626)
                      +++.++++..      .++......++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+|.
T Consensus        81 E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nill~~~~~ikL~DFG~a~  149 (376)
T cd05598          81 DYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCT  149 (376)
T ss_pred             eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHEEECCCCCEEEEeCCCCc
Confidence            7776666543      3567777889999999999999998   9999999999999999999999999974

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.75  E-value=1.2e-18  Score=181.09  Aligned_cols=182  Identities=20%  Similarity=0.229  Sum_probs=127.8

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHHHHh------ccccceecchHH--HHHHhh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNEIET------SNSNATIGANVK--AFVREM  472 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~  472 (626)
                      ++|.+.+.||+|+||.||+++.. +++.||||.++...   ......+.+|+..      ++++.+......  .++.++
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM   80 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence            46888899999999999999874 58999999997532   1233445555543      445554433222  233455


Q ss_pred             ccccCCCccc-------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhcccccc
Q 006915          473 KTFSDPTLSA-------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKL  545 (626)
Q Consensus       473 ~~~~~~~l~~-------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~  545 (626)
                      +++.++++..       .+++.....++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++..+.....
T Consensus        81 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~---i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~  157 (330)
T cd05601          81 EYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMG---YVHRDIKPENVLIDRTGHIKLADFGSAARLTANKM  157 (330)
T ss_pred             CCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEcccCchHheEECCCCCEEeccCCCCeECCCCCc
Confidence            6666655433       4677888889999999999999998   99999999999999999999999999965543221


Q ss_pred             CC--------CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccccCCCCCCCc
Q 006915          546 HA--------SSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPA  596 (626)
Q Consensus       546 ~~--------~~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~P~  596 (626)
                      ..        .+...+   ++    .....++...++...++++|+.+++++.++..|.
T Consensus       158 ~~~~~~~gt~~y~aPE---~~----~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf  209 (330)
T cd05601         158 VNSKLPVGTPDYIAPE---VL----TTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPF  209 (330)
T ss_pred             eeeecccCCccccCHH---Hh----ccccccccCCCCCcceeecccceeeeeccCCCCC
Confidence            10        011111   11    1122334556777888999999989999888875

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.75  E-value=2.2e-18  Score=176.00  Aligned_cols=125  Identities=30%  Similarity=0.405  Sum_probs=94.5

Q ss_pred             cccccccCeEEEEEEEcC-CCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH--HHHHhhccccCCCc
Q 006915          410 ANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK--AFVREMKTFSDPTL  480 (626)
Q Consensus       410 ~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~~~~~~l  480 (626)
                      ...||+|+||.||++... ++..||||.+........+.+.+|+..      ++++.+.+....  .++..++++.++++
T Consensus        27 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L  106 (292)
T cd06658          27 FIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGAL  106 (292)
T ss_pred             hhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcH
Confidence            467999999999999874 588999999876554555667777654      333333322111  12234455555554


Q ss_pred             cc-----CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          481 SA-----LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       481 ~~-----~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ..     .+++.....++.||+.||.|||+.+   |+||||||+||++++++.+||+|||++
T Consensus       107 ~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kL~dfg~~  165 (292)
T cd06658         107 TDIVTHTRMNEEQIATVCLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFC  165 (292)
T ss_pred             HHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEccCcch
Confidence            32     3678889999999999999999997   999999999999999999999999987

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.75  E-value=2.8e-18  Score=177.24  Aligned_cols=124  Identities=30%  Similarity=0.353  Sum_probs=93.7

Q ss_pred             ccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHHH-------HhccccceecchHH--HHHHhhccccC
Q 006915          411 NKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNEI-------ETSNSNATIGANVK--AFVREMKTFSD  477 (626)
Q Consensus       411 ~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e~-------~~~~~~~~~~~~~~--~~~~~~~~~~~  477 (626)
                      +.||+|+||.||+|+.. +++.||||.++...   ......+..|.       .+++++.+.+....  .++.+++++.+
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~   80 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence            36999999999999985 47899999997531   12223333333       33566665544322  33455667666


Q ss_pred             CCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          478 PTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       478 ~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +++..      .+++.....++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Dfg~~  143 (316)
T cd05619          81 GDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKG---IVYRDLKLDNILLDTDGHIKIADFGMC  143 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEccCCcc
Confidence            66542      4678888899999999999999998   999999999999999999999999987

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.75  E-value=3.7e-18  Score=171.51  Aligned_cols=130  Identities=28%  Similarity=0.429  Sum_probs=98.5

Q ss_pred             CccccccccccCeEEEEEEEcCCCcEEEEEEecCCCc------ccHHHHHHHHHh------ccccceecchHH--HHHHh
Q 006915          406 NFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASG------QGLEEFKNEIET------SNSNATIGANVK--AFVRE  471 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~------~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~  471 (626)
                      +|...+.||+|+||.||+|...+++.+|||.+.....      .....+.+|++.      ++++.+.+.+..  .+...
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv   80 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF   80 (265)
T ss_pred             CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence            3667789999999999999988899999999874321      122345555543      566666665433  22344


Q ss_pred             hccccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcch
Q 006915          472 MKTFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLAL  538 (626)
Q Consensus       472 ~~~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~  538 (626)
                      +++..++++..      .+++.....++.|++.||+|||+.+   |+|+||||+||++++++.+||+|||++.
T Consensus        81 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~  150 (265)
T cd06631          81 MEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNC---VVHRDIKGNNVMLMPNGIIKLIDFGCAR  150 (265)
T ss_pred             EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHhEEECCCCeEEeccchhhH
Confidence            45555555433      3567788889999999999999987   9999999999999999999999999873

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.75  E-value=5.3e-19  Score=182.67  Aligned_cols=130  Identities=29%  Similarity=0.396  Sum_probs=101.9

Q ss_pred             cCccccccccccCeEEEEEEEcCC-CcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH--HHHHhhccc
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFPG-GQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK--AFVREMKTF  475 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~~-~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~~  475 (626)
                      +.|.++..||.|+||.||++..++ +-..|.|++...+...++.|.-||++      ++++.+++....  .++..++++
T Consensus        32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC  111 (1187)
T KOG0579|consen   32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFC  111 (1187)
T ss_pred             HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeec
Confidence            446667899999999999998764 55678899988888888889888876      444444432211  222334444


Q ss_pred             cCCC-------cccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          476 SDPT-------LSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       476 ~~~~-------l~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      .++.       +...|...++.-++.|++.||.|||+..   |||||||+.|||++-+|.++|+|||.+
T Consensus       112 ~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~---iIHRDLKAGNiL~TldGdirLADFGVS  177 (1187)
T KOG0579|consen  112 GGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQN---IIHRDLKAGNILLTLDGDIRLADFGVS  177 (1187)
T ss_pred             CCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcc---hhhhhccccceEEEecCcEeeeccccc
Confidence            4443       4556888888899999999999999998   999999999999999999999999998

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.75  E-value=2.7e-18  Score=151.77  Aligned_cols=132  Identities=25%  Similarity=0.414  Sum_probs=97.9

Q ss_pred             CccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCc------ccHH--HHHHHHHhccccceecchHH--HHHHhhcc
Q 006915          406 NFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASG------QGLE--EFKNEIETSNSNATIGANVK--AFVREMKT  474 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~------~~~~--~~~~e~~~~~~~~~~~~~~~--~~~~~~~~  474 (626)
                      +|...++||+|.||+||+|+.. .++.||+|+++-...      ..++  -+.+|+++.|+++++.....  .+..++++
T Consensus         3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~   82 (292)
T KOG0662|consen    3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF   82 (292)
T ss_pred             chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence            4566689999999999999875 488999999874321      1122  35678899999988753221  00001111


Q ss_pred             cc------CCCcccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhc
Q 006915          475 FS------DPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM  540 (626)
Q Consensus       475 ~~------~~~l~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~  540 (626)
                      ..      -.++...++.....+++.|+++||.|.|+++   +.||||||.|.||+.+|+.||+|||+|+.+
T Consensus        83 cdqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshn---vlhrdlkpqnllin~ngelkladfglaraf  151 (292)
T KOG0662|consen   83 CDQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHN---VLHRDLKPQNLLINRNGELKLADFGLARAF  151 (292)
T ss_pred             hhHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhh---hhhccCCcceEEeccCCcEEecccchhhhc
Confidence            00      0123345777888899999999999999998   999999999999999999999999999543

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.75  E-value=2.1e-18  Score=173.60  Aligned_cols=131  Identities=29%  Similarity=0.450  Sum_probs=100.1

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCcccHHHHHHHHH------hccccceecchHH--HHHHhhcc
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQGLEEFKNEIE------TSNSNATIGANVK--AFVREMKT  474 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~~~  474 (626)
                      .++|...+.||+|+||.||+|+.. +++.||+|.++.........+.+|+.      +++++.+.+....  .++..+++
T Consensus         8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~   87 (267)
T cd06645           8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEF   87 (267)
T ss_pred             HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Confidence            346788899999999999999874 58899999987554333344555543      4666666654322  22234455


Q ss_pred             ccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          475 FSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       475 ~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ..++++..      .+++.+...++.|++.||.|||+.+   ++|+||||+||+++.++.+||+|||++
T Consensus        88 ~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~  153 (267)
T cd06645          88 CGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKG---KMHRDIKGANILLTDNGHVKLADFGVS  153 (267)
T ss_pred             cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECcceee
Confidence            55555432      4678888999999999999999998   999999999999999999999999987

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.75  E-value=2.6e-18  Score=177.62  Aligned_cols=124  Identities=30%  Similarity=0.329  Sum_probs=93.9

Q ss_pred             ccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHHHH-------hccccceecchHH--HHHHhhccccC
Q 006915          411 NKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNEIE-------TSNSNATIGANVK--AFVREMKTFSD  477 (626)
Q Consensus       411 ~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e~~-------~~~~~~~~~~~~~--~~~~~~~~~~~  477 (626)
                      +.||+|+||.||+++.. +++.||||.++...   ......+..|.+       +++++++.+....  .++.+++++.+
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~   80 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG   80 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            46999999999999885 47899999997532   222334444433       3556665553221  23345566666


Q ss_pred             CCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          478 PTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       478 ~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +++.      ..+++.....++.||+.||.|||+.+   |+||||||+|||+++++.+||+|||++
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~  143 (318)
T cd05570          81 GDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERG---IIYRDLKLDNVLLDSEGHIKIADFGMC  143 (318)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC---eEccCCCHHHeEECCCCcEEecccCCC
Confidence            6553      24788899999999999999999998   999999999999999999999999987

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.75  E-value=1.2e-18  Score=180.59  Aligned_cols=182  Identities=23%  Similarity=0.218  Sum_probs=117.0

Q ss_pred             CccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHHHHh-------ccccceecchHH--HHHHhh
Q 006915          406 NFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNEIET-------SNSNATIGANVK--AFVREM  472 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e~~~-------~~~~~~~~~~~~--~~~~~~  472 (626)
                      +|.+.+.||+|+||.||+|+.. +++.||||.+....   ....+.+..|...       .+++.+.+....  .++.++
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM   80 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence            4777899999999999999875 47899999987532   1222334444332       223333322211  233456


Q ss_pred             ccccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhccccccC
Q 006915          473 KTFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLH  546 (626)
Q Consensus       473 ~~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~  546 (626)
                      +++.++++.      ..+++..+..++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||++.........
T Consensus        81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~  157 (323)
T cd05616          81 EYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVT  157 (323)
T ss_pred             cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---EEecCCCHHHeEECCCCcEEEccCCCceecCCCCCc
Confidence            666666553      24678888999999999999999988   999999999999999999999999998643321111


Q ss_pred             CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccccCCCCCCCc
Q 006915          547 ASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPA  596 (626)
Q Consensus       547 ~~~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~P~  596 (626)
                      ....      .....++..+.--....+.+.++++|+.+++++.+++.|.
T Consensus       158 ~~~~------~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf  201 (323)
T cd05616         158 TKTF------CGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF  201 (323)
T ss_pred             cccC------CCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCC
Confidence            0000      0000011111111233455667777777777777776664

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.74  E-value=1.1e-18  Score=182.07  Aligned_cols=183  Identities=19%  Similarity=0.207  Sum_probs=125.8

Q ss_pred             hcCccccccccccCeEEEEEEEcCC--CcEEEEEEecCCC---cccHHHHHHHHH------hccccceecchHH--HHHH
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFPG--GQQIAVKRLSSAS---GQGLEEFKNEIE------TSNSNATIGANVK--AFVR  470 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~~--~~~vAvK~l~~~~---~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~  470 (626)
                      .++|.+.+.||+|+||.||+|++..  +..||||++....   ....+.+.+|+.      +++++.+.+....  .++.
T Consensus        29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l  108 (340)
T PTZ00426         29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL  108 (340)
T ss_pred             hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence            3468888999999999999998643  4689999986421   223344555544      4777777665433  2334


Q ss_pred             hhccccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhccccc
Q 006915          471 EMKTFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQK  544 (626)
Q Consensus       471 ~~~~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~  544 (626)
                      +++++.++++..      .+++..+..++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||++..+....
T Consensus       109 v~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~~  185 (340)
T PTZ00426        109 VLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLN---IVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTRT  185 (340)
T ss_pred             EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEecCCCCeecCCCc
Confidence            566666666543      3667888899999999999999998   9999999999999999999999999996543211


Q ss_pred             cCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccccCCCCCCCcee
Q 006915          545 LHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAFV  598 (626)
Q Consensus       545 ~~~~~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~P~~~  598 (626)
                      .......         .++..+.--...++...++++|+.+++++.++..|...
T Consensus       186 ~~~~gt~---------~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~  230 (340)
T PTZ00426        186 YTLCGTP---------EYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYA  230 (340)
T ss_pred             ceecCCh---------hhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCC
Confidence            1100000         11111111123355667788888888888888777543

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.74  E-value=3.3e-18  Score=177.80  Aligned_cols=124  Identities=23%  Similarity=0.269  Sum_probs=96.0

Q ss_pred             ccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHHHH-------hccccceecchHH--HHHHhhccccC
Q 006915          411 NKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNEIE-------TSNSNATIGANVK--AFVREMKTFSD  477 (626)
Q Consensus       411 ~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e~~-------~~~~~~~~~~~~~--~~~~~~~~~~~  477 (626)
                      +.||+|+||.||+++.. +++.||||.++...   ......+..|..       +++++.+.+....  .++.+++++.+
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~   80 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG   80 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence            36999999999999875 58899999997532   222334455543       4667766654332  33455666666


Q ss_pred             CCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          478 PTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       478 ~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +++.      ..+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus        81 g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~~  143 (329)
T cd05588          81 GDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMC  143 (329)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEECcCccc
Confidence            6653      34788899999999999999999998   999999999999999999999999987

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.74  E-value=6.8e-18  Score=171.51  Aligned_cols=128  Identities=28%  Similarity=0.450  Sum_probs=95.8

Q ss_pred             CccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC--cccHHHHHHHHH------hccccceecchHH--HHHHhhcc
Q 006915          406 NFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS--GQGLEEFKNEIE------TSNSNATIGANVK--AFVREMKT  474 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~~~  474 (626)
                      +|++.+.||+|+||.||+|+.. +++.||||.++...  ......+.+|+.      +++++++.+....  .++.++++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF   80 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence            4777899999999999999885 58999999986432  222344445543      4677777665432  12223333


Q ss_pred             ccCCCc---------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          475 FSDPTL---------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       475 ~~~~~l---------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +. +++         ...+++..+..++.||+.||+|||+.+   |+|+||||+|||++.++.+||+|||++
T Consensus        81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~  148 (285)
T cd07861          81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRR---VLHRDLKPQNLLIDNKGVIKLADFGLA  148 (285)
T ss_pred             CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEEcCCCcEEECcccce
Confidence            32 111         135788889999999999999999987   999999999999999999999999986

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.74  E-value=2.3e-18  Score=183.25  Aligned_cols=131  Identities=26%  Similarity=0.303  Sum_probs=96.8

Q ss_pred             hcCccccccccccCeEEEEEEEcC---CCcEEEEEEecCCCc-ccHHHHHHHHHhccccceecchHH--HHHHhhccccC
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP---GGQQIAVKRLSSASG-QGLEEFKNEIETSNSNATIGANVK--AFVREMKTFSD  477 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~---~~~~vAvK~l~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~--~~~~~~~~~~~  477 (626)
                      ..+|.+.+.||+|+||.||++...   .+..||||.+..... ..+.++...+.+++++++++....  .++..++++..
T Consensus        91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~  170 (392)
T PHA03207         91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGKTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPKYKC  170 (392)
T ss_pred             cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehhcCC
Confidence            357999999999999999999753   367899999875322 223344555666788877653321  11112222211


Q ss_pred             C-----CcccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          478 P-----TLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       478 ~-----~l~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      .     .....+++..++.++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus       171 ~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~g---ivHrDlkp~Nill~~~~~~~l~DfG~a  232 (392)
T PHA03207        171 DLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRG---IIHRDVKTENIFLDEPENAVLGDFGAA  232 (392)
T ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEccCccc
Confidence            0     11235789999999999999999999998   999999999999999999999999987

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.74  E-value=2.4e-18  Score=174.24  Aligned_cols=122  Identities=31%  Similarity=0.398  Sum_probs=91.7

Q ss_pred             ccccCeEEEEEEEcC-CCcEEEEEEecCCCc---ccH------HHHHHHHHhccccceecchHH--HHHHhhccccCCCc
Q 006915          413 LGKGGFGPVYKAKFP-GGQQIAVKRLSSASG---QGL------EEFKNEIETSNSNATIGANVK--AFVREMKTFSDPTL  480 (626)
Q Consensus       413 lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~---~~~------~~~~~e~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l  480 (626)
                      ||+|+||.||+++.. +++.||+|.+.....   ...      .++.+++.+++++.+......  .++.+++++.++++
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L   80 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL   80 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence            799999999999874 589999999864211   111      223334445777766544322  33355666666655


Q ss_pred             cc--------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          481 SA--------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       481 ~~--------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ..        .+++..+..++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~~l~Dfg~~  142 (277)
T cd05607          81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSMD---IVYRDMKPENVLLDDQGNCRLSDLGLA  142 (277)
T ss_pred             HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC---EEEccCChHhEEEcCCCCEEEeeceee
Confidence            32        3678888899999999999999988   999999999999999999999999987

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.74  E-value=6.3e-18  Score=171.16  Aligned_cols=173  Identities=25%  Similarity=0.371  Sum_probs=125.8

Q ss_pred             CccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC-cccHHHHHHHHHh------ccccceecchHH--HHHHhhccc
Q 006915          406 NFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS-GQGLEEFKNEIET------SNSNATIGANVK--AFVREMKTF  475 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~~  475 (626)
                      .|+..+.||+|+||.||+|... +++.||||.+.... ......+.+|+..      ++++.+.+.+..  .++.+++++
T Consensus         5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06640           5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL   84 (277)
T ss_pred             hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence            4667789999999999999875 58899999987432 3344566666553      566666654432  233445555


Q ss_pred             cCCCccc-----CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhccc--------
Q 006915          476 SDPTLSA-----LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD--------  542 (626)
Q Consensus       476 ~~~~l~~-----~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~--------  542 (626)
                      .++++..     .+++.+...++.|++.||+|||+.+   ++|+||+|+||+++.++.++|+|||++..+..        
T Consensus        85 ~~~~L~~~i~~~~l~~~~~~~~~~~l~~~l~~lh~~~---ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~  161 (277)
T cd06640          85 GGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEK---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTF  161 (277)
T ss_pred             CCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCcCCChhhEEEcCCCCEEEcccccceeccCCccccccc
Confidence            5555433     3567888899999999999999987   99999999999999999999999998822111        


Q ss_pred             --------cc---------------------------c------------------CCCCChHHHHHHHHHHHHhcccCC
Q 006915          543 --------QK---------------------------L------------------HASSKPNEILKCINVGLLCVQEDP  569 (626)
Q Consensus       543 --------~~---------------------------~------------------~~~~~~~~~~~~~~~~~~C~~~~p  569 (626)
                              ++                           .                  ...........+.+++..||+.+|
T Consensus       162 ~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  241 (277)
T cd06640         162 VGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLTGEFSKPFKEFIDACLNKDP  241 (277)
T ss_pred             cCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcCCCCCCchhhhHHHHHHHHHHcccCc
Confidence                    00                           0                  000111233456788889999999


Q ss_pred             CCCCCHHHHHHH
Q 006915          570 NDRPTMSDVVIM  581 (626)
Q Consensus       570 ~~RPs~~~vl~~  581 (626)
                      .+||++.+++..
T Consensus       242 ~~Rp~~~~il~~  253 (277)
T cd06640         242 SFRPTAKELLKH  253 (277)
T ss_pred             ccCcCHHHHHhC
Confidence            999999999865

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.74  E-value=4e-18  Score=172.95  Aligned_cols=122  Identities=34%  Similarity=0.360  Sum_probs=91.8

Q ss_pred             ccccCeEEEEEEEcC-CCcEEEEEEecCCCc---ccHHHHHHHHHh------ccccceecchHH--HHHHhhccccCCCc
Q 006915          413 LGKGGFGPVYKAKFP-GGQQIAVKRLSSASG---QGLEEFKNEIET------SNSNATIGANVK--AFVREMKTFSDPTL  480 (626)
Q Consensus       413 lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~~~~~~l  480 (626)
                      ||+|+||+||++... +++.||||.+.....   ...+.+..|+++      ++++.+......  .++..++++.++++
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L   80 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL   80 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence            799999999999874 588999999874321   223445555543      445544433222  23345566666554


Q ss_pred             c----------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          481 S----------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       481 ~----------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      .          ..+++..+..++.||+.||.|||+.+   |+||||||+|||+++++.+||+|||++
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~  144 (280)
T cd05608          81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRR---IIYRDLKPENVLLDNDGNVRISDLGLA  144 (280)
T ss_pred             HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCccc
Confidence            2          24678889999999999999999998   999999999999999999999999987

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.74  E-value=5.1e-18  Score=172.51  Aligned_cols=130  Identities=26%  Similarity=0.368  Sum_probs=100.6

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC-cccHHHHHHHHHh------ccccceecchHH--HHHHhhcc
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS-GQGLEEFKNEIET------SNSNATIGANVK--AFVREMKT  474 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~  474 (626)
                      ++|++.+.||+|+||.||++... +++.||+|.+.... ....+.+.+|++.      +++++..+....  .++..+++
T Consensus         5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (284)
T cd06620           5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF   84 (284)
T ss_pred             HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence            46777899999999999999874 58899999886432 2334566666553      566666655443  23345566


Q ss_pred             ccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhC-CCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          475 FSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQD-SRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       475 ~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +.++++.      ..+.+.....++.+++.||.|||+. +   ++||||||+||++++++.++|+|||++
T Consensus        85 ~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~---i~H~dl~p~nil~~~~~~~~l~d~gl~  151 (284)
T cd06620          85 MDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHR---IMHRDIKPSNILVNSRGQIKLCDFGVS  151 (284)
T ss_pred             CCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcC---eeccCCCHHHEEECCCCcEEEccCCcc
Confidence            6665553      2467888899999999999999974 5   999999999999999999999999987

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.74  E-value=5e-18  Score=169.62  Aligned_cols=129  Identities=29%  Similarity=0.425  Sum_probs=98.2

Q ss_pred             CccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC-----cccHHHHHHHHHh------ccccceecchHH--HHHHh
Q 006915          406 NFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS-----GQGLEEFKNEIET------SNSNATIGANVK--AFVRE  471 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~-----~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~  471 (626)
                      +|+..+.||+|+||.||+|... +++.||+|.+....     ....+.+.+|++.      ++++++.+.+..  .++..
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF   80 (258)
T ss_pred             CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence            3566789999999999999885 68999999986432     1234556666553      566666654332  22334


Q ss_pred             hccccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          472 MKTFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       472 ~~~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +++..+.++..      .+++..+..++.||+.||.|||+.+   |+|+||+|+||+++.++.+||+|||++
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~~~ni~~~~~~~~kl~d~~~~  149 (258)
T cd06632          81 LELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRN---TVHRDIKGANILVDTNGVVKLADFGMA  149 (258)
T ss_pred             EEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccc
Confidence            45555554432      3678888899999999999999987   999999999999999999999999977

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.74  E-value=1.2e-17  Score=172.55  Aligned_cols=125  Identities=26%  Similarity=0.364  Sum_probs=87.3

Q ss_pred             cccccccCeEEEEEEEcC---CCcEEEEEEecCCCcc----cHHHHHHHHHhccccceecchHH----HHHHhhccccC-
Q 006915          410 ANKLGKGGFGPVYKAKFP---GGQQIAVKRLSSASGQ----GLEEFKNEIETSNSNATIGANVK----AFVREMKTFSD-  477 (626)
Q Consensus       410 ~~~lG~G~fG~Vy~~~~~---~~~~vAvK~l~~~~~~----~~~~~~~e~~~~~~~~~~~~~~~----~~~~~~~~~~~-  477 (626)
                      .++||+|+||.||+|+..   +++.||||.+......    .+.++.+.+.++|++++.+....    .++..+++... 
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~~   85 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHD   85 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccCCC
Confidence            368999999999999864   4678999998753211    12233444556777776553321    01111111110 


Q ss_pred             -------------CCcccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEE----CCCCcEEEEecCcc
Q 006915          478 -------------PTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILL----DQEMNPKISDFGLA  537 (626)
Q Consensus       478 -------------~~l~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl----~~~~~~kl~DFGla  537 (626)
                                   ......+++.....++.||+.||.|||+.+   |+||||||+|||+    +.++.+||+|||++
T Consensus        86 l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a  159 (317)
T cd07868          86 LWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFA  159 (317)
T ss_pred             HHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence                         011124778888999999999999999998   9999999999999    45678999999987

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.74  E-value=6.2e-18  Score=171.82  Aligned_cols=130  Identities=24%  Similarity=0.357  Sum_probs=97.1

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC--cccHHHHHHHHH------hccccceecchHH--HHHHhhc
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS--GQGLEEFKNEIE------TSNSNATIGANVK--AFVREMK  473 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~~  473 (626)
                      ++|+..+.||+|+||.||+|+.. +++.||+|++....  ....+.+.+|++      +++++.+++....  .+...++
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e   80 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE   80 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence            46888899999999999999985 58999999986432  122334555544      3566666554322  1223344


Q ss_pred             cccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          474 TFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       474 ~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++.++.+.      ..+++..+..++.|++.||+|||+.+   ++|+||||+||+++.++.+||+|||++
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~  147 (286)
T cd07847          81 YCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHN---CIHRDVKPENILITKQGQIKLCDFGFA  147 (286)
T ss_pred             ccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCChhhEEEcCCCcEEECccccc
Confidence            44433221      24788999999999999999999987   999999999999999999999999987

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.74  E-value=1.3e-18  Score=180.32  Aligned_cols=132  Identities=27%  Similarity=0.302  Sum_probs=97.9

Q ss_pred             CccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHHHHhc-------cccceecchHH--HHHHhh
Q 006915          406 NFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNEIETS-------NSNATIGANVK--AFVREM  472 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e~~~~-------~~~~~~~~~~~--~~~~~~  472 (626)
                      +|...+.||+|+||.||+++.. +++.||||.+....   ....+.+..|....       +++.+......  .++.++
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM   80 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence            3667789999999999999874 58899999997532   22334455554431       22222222111  233456


Q ss_pred             ccccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhc
Q 006915          473 KTFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM  540 (626)
Q Consensus       473 ~~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~  540 (626)
                      +++.++++.      ..+++.++..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||++...
T Consensus        81 Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~---ivHrDikp~Nill~~~~~ikL~Dfg~~~~~  151 (323)
T cd05615          81 EYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEH  151 (323)
T ss_pred             cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEecccccccc
Confidence            666666653      34778899999999999999999998   999999999999999999999999998654

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.74  E-value=3.6e-19  Score=166.85  Aligned_cols=184  Identities=26%  Similarity=0.331  Sum_probs=125.5

Q ss_pred             cccccccccCeEEEEEEEcC-CCcEEEEEEecCCC-cccHHHHHHHHHh-------ccccceecchHHH--------HH-
Q 006915          408 SEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS-GQGLEEFKNEIET-------SNSNATIGANVKA--------FV-  469 (626)
Q Consensus       408 ~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~e~~~-------~~~~~~~~~~~~~--------~~-  469 (626)
                      +....||.|+||+|+|-.++ .|+..|||+++... .....+++.|.+.       +++|++.|.....        ++ 
T Consensus        67 qdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd  146 (361)
T KOG1006|consen   67 QDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMD  146 (361)
T ss_pred             HHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHh
Confidence            33468999999999999884 59999999998543 3566778888765       6777777754431        10 


Q ss_pred             Hhhccc---cCCCcccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhccccccC
Q 006915          470 REMKTF---SDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLH  546 (626)
Q Consensus       470 ~~~~~~---~~~~l~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~  546 (626)
                      .+++.+   ...-....+++.-.-.|...+..||.||-+.-  .|||||+||+||||+..|.+||+|||++..+.+....
T Consensus       147 ~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiAk  224 (361)
T KOG1006|consen  147 ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIAK  224 (361)
T ss_pred             hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchHhHHHHHHh
Confidence            111100   01112233555555567778889999998753  6999999999999999999999999999777664321


Q ss_pred             CCCChHHHHHHHHHHHHhcccCCCCC-CCHHHHHHHhccccccCCCCCCCceee
Q 006915          547 ASSKPNEILKCINVGLLCVQEDPNDR-PTMSDVVIMLGSEAMNLATPKRPAFVI  599 (626)
Q Consensus       547 ~~~~~~~~~~~~~~~~~C~~~~p~~R-Ps~~~vl~~L~~~~~~~~~~~~P~~~~  599 (626)
                      . .+..+...+     .--..+|..- ..++..+|+|+-.++|+++++-|..-.
T Consensus       225 T-~daGCrpYm-----APERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w  272 (361)
T KOG1006|consen  225 T-VDAGCRPYM-----APERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKW  272 (361)
T ss_pred             h-hccCCcccc-----ChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchH
Confidence            1 000000000     0012345555 677889999999999999999886543

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.74  E-value=1.6e-18  Score=180.32  Aligned_cols=134  Identities=25%  Similarity=0.328  Sum_probs=101.4

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCC---CcccHHHHHHHHH------hccccceecchHH--HHHHhh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSA---SGQGLEEFKNEIE------TSNSNATIGANVK--AFVREM  472 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~---~~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~  472 (626)
                      ++|++.+.||+|+||.||+++.. +++.||||.+.+.   .......+.+|+.      +++++.+......  .++.++
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM   80 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence            46888999999999999999975 5899999998742   1222344555554      3555555543322  334556


Q ss_pred             ccccCCCccc-------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhcc
Q 006915          473 KTFSDPTLSA-------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMM  541 (626)
Q Consensus       473 ~~~~~~~l~~-------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~  541 (626)
                      +++.++++..       .++...+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||++..+.
T Consensus        81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~  153 (331)
T cd05597          81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLG---YVHRDIKPDNVLLDKNGHIRLADFGSCLRLL  153 (331)
T ss_pred             ecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eEECCCCHHHEEECCCCCEEEEECCceeecC
Confidence            6666655533       3567788889999999999999998   9999999999999999999999999986544

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.74  E-value=1.2e-17  Score=171.84  Aligned_cols=130  Identities=28%  Similarity=0.414  Sum_probs=96.8

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCc---ccHHHHHHHHH------hccccceecchHH--HHHHhh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASG---QGLEEFKNEIE------TSNSNATIGANVK--AFVREM  472 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~  472 (626)
                      +.|...+.||+|+||.||+|... +++.||+|.+.....   ....++.+|++      +++++.+.+.+..  ..+.++
T Consensus        15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~   94 (307)
T cd06607          15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM   94 (307)
T ss_pred             hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence            45788899999999999999874 589999999864322   22344555544      4677776654432  111222


Q ss_pred             ccccCC------CcccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          473 KTFSDP------TLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       473 ~~~~~~------~l~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +++.+.      .....+++..+..++.|++.||.|||+.+   |+|+||+|+||++++++.+||+|||++
T Consensus        95 e~~~g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~---i~H~dl~p~nIl~~~~~~~kL~dfg~~  162 (307)
T cd06607          95 EYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHE---RIHRDIKAGNILLTEPGTVKLADFGSA  162 (307)
T ss_pred             HhhCCCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEECCCCCEEEeecCcc
Confidence            322211      01235788999999999999999999987   999999999999999999999999987

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.74  E-value=3.1e-19  Score=169.59  Aligned_cols=127  Identities=31%  Similarity=0.451  Sum_probs=102.0

Q ss_pred             CccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH--HHHHhhcccc
Q 006915          406 NFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK--AFVREMKTFS  476 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~~~  476 (626)
                      -|.+..+||+|+||.||++.++ .|+.||||.+...  ..++++..|+.+      +.+|+..|..+.  .++.+|+|+.
T Consensus        34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCG  111 (502)
T KOG0574|consen   34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCG  111 (502)
T ss_pred             HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcC
Confidence            3677789999999999999885 5999999998753  467788888776      444555443332  4456677776


Q ss_pred             CCCcc-------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          477 DPTLS-------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       477 ~~~l~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      .++..       +.|...+...++...++||+|||...   -||||||+.||||+.+|.+||+|||.|
T Consensus       112 AGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~---KIHRDIKAGNILLNT~G~AKLADFGVA  176 (502)
T KOG0574|consen  112 AGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLK---KIHRDIKAGNILLNTDGIAKLADFGVA  176 (502)
T ss_pred             CCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHH---HHHhhcccccEEEcccchhhhhhcccc
Confidence            66543       34677788889999999999999875   899999999999999999999999998

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.74  E-value=1.5e-18  Score=183.27  Aligned_cols=180  Identities=27%  Similarity=0.357  Sum_probs=130.1

Q ss_pred             ccccccccccCeEEEEEEEc-CCCcEEEEEEecCCC-cccHHHHHHHHH------hccccceecchHHHH--------HH
Q 006915          407 FSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSAS-GQGLEEFKNEIE------TSNSNATIGANVKAF--------VR  470 (626)
Q Consensus       407 f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~-~~~~~~~~~e~~------~~~~~~~~~~~~~~~--------~~  470 (626)
                      +...+.||+|+||.||+|+. ..|+.||||.++... ....+...+|++      ++|+|+..+......        +.
T Consensus        15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl   94 (732)
T KOG4250|consen   15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL   94 (732)
T ss_pred             eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence            34457899999999999997 469999999998643 233445555554      477777765433322        34


Q ss_pred             hhccccCCCcccC---------CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEE--CCCCc--EEEEecCcc
Q 006915          471 EMKTFSDPTLSAL---------LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILL--DQEMN--PKISDFGLA  537 (626)
Q Consensus       471 ~~~~~~~~~l~~~---------l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl--~~~~~--~kl~DFGla  537 (626)
                      .|+++.++++...         |+..+.+.++.+++.||.|||+++   |+||||||.||++  ..+|+  -||+|||.|
T Consensus        95 vmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~---IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~A  171 (732)
T KOG4250|consen   95 VMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENG---IVHRDLKPGNIVLQIGEDGQSIYKLTDFGAA  171 (732)
T ss_pred             EEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcC---ceeccCCCCcEEEeecCCCceEEeeeccccc
Confidence            5788888887665         568889999999999999999998   9999999999998  33343  799999999


Q ss_pred             hhccccccCCCCC--hHH-HHHHHHHHHHhcccCCCCCCCHHHHHHHhccccccCCCCCCCcee
Q 006915          538 LDMMDQKLHASSK--PNE-ILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAFV  598 (626)
Q Consensus       538 ~~~~~~~~~~~~~--~~~-~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~P~~~  598 (626)
                      +++-|.......-  .+. .+++.+       .  ..-.+..-++|++|.++++..++..|...
T Consensus       172 rel~d~s~~~S~vGT~~YLhPel~E-------~--q~~y~~tVDLWS~GvtlY~caTG~lPF~p  226 (732)
T KOG4250|consen  172 RELDDNSLFTSLVGTEEYLHPELYE-------R--QKKYTATVDLWSFGVTLYECATGELPFIP  226 (732)
T ss_pred             ccCCCCCeeeeecCchhhcChHHHh-------h--ccCcCceeehhhhhhHHHHHhccCCCCCc
Confidence            9998876533221  000 011111       0  22235666799999999999999988543

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.74  E-value=1.1e-17  Score=167.46  Aligned_cols=131  Identities=29%  Similarity=0.474  Sum_probs=100.7

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH--HHHHhhcc
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK--AFVREMKT  474 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~  474 (626)
                      .++|+..+.||+|+||.||+|... +++.+|+|.+..........+.+|++.      ++++.+.+....  .++..+++
T Consensus         2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~   81 (262)
T cd06613           2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY   81 (262)
T ss_pred             ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence            357888899999999999999874 578999999986554455667777653      666666553322  12223344


Q ss_pred             ccCCCcc-------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          475 FSDPTLS-------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       475 ~~~~~l~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ..++.+.       ..++......++.|++.||.|||+.+   |+|+||||+||++++++.+||+|||++
T Consensus        82 ~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~  148 (262)
T cd06613          82 CGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETG---KIHRDIKGANILLTEDGDVKLADFGVS  148 (262)
T ss_pred             CCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCC---ceecCCChhhEEECCCCCEEECccccc
Confidence            4333332       34678888999999999999999987   999999999999999999999999987

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.74  E-value=8.9e-18  Score=169.44  Aligned_cols=129  Identities=28%  Similarity=0.436  Sum_probs=96.8

Q ss_pred             CccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCc---c-------cHHHHHHHHH------hccccceecchHH--
Q 006915          406 NFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASG---Q-------GLEEFKNEIE------TSNSNATIGANVK--  466 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~---~-------~~~~~~~e~~------~~~~~~~~~~~~~--  466 (626)
                      +|...+.||+|+||.||+|... +++.||||.++....   .       ..+.+.+|+.      +++++.+.+.+..  
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   81 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE   81 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence            4667789999999999999864 589999998863211   0       1234555554      3666666654433  


Q ss_pred             HHHHhhccccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          467 AFVREMKTFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       467 ~~~~~~~~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      .+...+++..++++.      ..+++..+..++.||+.||.|||+.+   ++|+||||+||+++.++.+||+|||++
T Consensus        82 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~~~nil~~~~~~~~l~d~~~~  155 (272)
T cd06629          82 YLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKG---ILHRDLKADNLLVDADGICKISDFGIS  155 (272)
T ss_pred             ceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCC---eeecCCChhhEEEcCCCeEEEeecccc
Confidence            233445555555543      34678888899999999999999987   999999999999999999999999987

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.74  E-value=5e-18  Score=170.95  Aligned_cols=170  Identities=31%  Similarity=0.424  Sum_probs=120.0

Q ss_pred             ccccccCeEEEEEEEcCC-------CcEEEEEEecCCC-cccHHHHHHHHH------hccccceecchHH--HHHHhhcc
Q 006915          411 NKLGKGGFGPVYKAKFPG-------GQQIAVKRLSSAS-GQGLEEFKNEIE------TSNSNATIGANVK--AFVREMKT  474 (626)
Q Consensus       411 ~~lG~G~fG~Vy~~~~~~-------~~~vAvK~l~~~~-~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~~~  474 (626)
                      +.||+|+||.||+|+..+       ++.+|||.+.... .....++.+|+.      +++++++.+.+..  ..+..+++
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL   80 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence            369999999999998743       3579999986533 233456666654      4677776665432  22233444


Q ss_pred             ccCCCcc-------------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCC-----cEEEEecCc
Q 006915          475 FSDPTLS-------------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEM-----NPKISDFGL  536 (626)
Q Consensus       475 ~~~~~l~-------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~-----~~kl~DFGl  536 (626)
                      ..++++.             ..+++..++.++.|++.||.|||+.+   ++|+||||+|||++.+.     .+||+|||+
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~  157 (269)
T cd05044          81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH---FIHRDLAARNCLVSEKGYDADRVVKIGDFGL  157 (269)
T ss_pred             cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCC---cccCCCChheEEEecCCCCCCcceEECCccc
Confidence            4444432             23677888999999999999999987   99999999999999877     899999998


Q ss_pred             chhcccc----------------------------------------------ccCC------------------CCChH
Q 006915          537 ALDMMDQ----------------------------------------------KLHA------------------SSKPN  552 (626)
Q Consensus       537 a~~~~~~----------------------------------------------~~~~------------------~~~~~  552 (626)
                      +..+...                                              ....                  ..+..
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  237 (269)
T cd05044         158 ARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGGRLQKPEN  237 (269)
T ss_pred             ccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcCCccCCccc
Confidence            7322110                                              0000                  00011


Q ss_pred             HHHHHHHHHHHhcccCCCCCCCHHHHHHHhc
Q 006915          553 EILKCINVGLLCVQEDPNDRPTMSDVVIMLG  583 (626)
Q Consensus       553 ~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~  583 (626)
                      ....+.+++..|++.+|.+||++.++++.|.
T Consensus       238 ~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~  268 (269)
T cd05044         238 CPDKIYQLMTNCWAQDPSERPTFDRIQEILQ  268 (269)
T ss_pred             chHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence            2245678888999999999999999999885

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.74  E-value=5.2e-19  Score=187.74  Aligned_cols=131  Identities=23%  Similarity=0.291  Sum_probs=100.6

Q ss_pred             CccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHHHH------hccccceecchHH--HHHHhhc
Q 006915          406 NFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNEIE------TSNSNATIGANVK--AFVREMK  473 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~~  473 (626)
                      .|+..+.||+|+||.||+|+.. +++.||||.+....   ......+.+|++      +++++++.+....  .++.+++
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E   81 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD   81 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence            5788899999999999999874 58899999997532   122344555554      3667776654332  3345566


Q ss_pred             cccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchh
Q 006915          474 TFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALD  539 (626)
Q Consensus       474 ~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~  539 (626)
                      ++.++++..      .++......++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||++..
T Consensus        82 ~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~---ivHrDlKp~NILl~~~g~~kL~DFGla~~  150 (382)
T cd05625          82 YIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTG  150 (382)
T ss_pred             CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEEeECCCCcc
Confidence            666665533      3567777889999999999999998   99999999999999999999999999743

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.74  E-value=3.4e-18  Score=173.90  Aligned_cols=128  Identities=32%  Similarity=0.350  Sum_probs=94.6

Q ss_pred             ccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCc---ccHHHHHHHHHh------ccccceecchHH--HHHHhhcc
Q 006915          407 FSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASG---QGLEEFKNEIET------SNSNATIGANVK--AFVREMKT  474 (626)
Q Consensus       407 f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~  474 (626)
                      |+..+.||+|+||.||++... +++.||||.+.....   .....+.+|+..      ++++.+.+....  .++..+++
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL   81 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence            566789999999999999875 588999999875321   223345556554      444444333221  22234455


Q ss_pred             ccCCCccc--------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          475 FSDPTLSA--------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       475 ~~~~~l~~--------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +.++++..        .+++..+..++.|++.||.|||+.+   |+||||||+|||+++++.++|+|||++
T Consensus        82 ~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nil~~~~~~~~l~Dfg~~  149 (285)
T cd05630          82 MNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQER---IVYRDLKPENILLDDHGHIRISDLGLA  149 (285)
T ss_pred             cCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeccce
Confidence            55554432        3677888999999999999999987   999999999999999999999999987

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.74  E-value=1.2e-17  Score=168.02  Aligned_cols=129  Identities=30%  Similarity=0.474  Sum_probs=97.0

Q ss_pred             ccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCcc---------cHHHHHHHHH------hccccceecchHH--HH
Q 006915          407 FSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQ---------GLEEFKNEIE------TSNSNATIGANVK--AF  468 (626)
Q Consensus       407 f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~---------~~~~~~~e~~------~~~~~~~~~~~~~--~~  468 (626)
                      |.+.+.||+|+||.||+|... +++.+|+|.+......         ..+.+.+|+.      +++++++.+....  .+
T Consensus         2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   81 (267)
T cd06628           2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL   81 (267)
T ss_pred             ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence            566789999999999999874 5889999988643221         1234555544      4666776655433  23


Q ss_pred             HHhhccccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcch
Q 006915          469 VREMKTFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLAL  538 (626)
Q Consensus       469 ~~~~~~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~  538 (626)
                      ...+++..++++.      ..+++.....++.|++.||+|||+.+   ++||||||+|||+++++.+||+|||++.
T Consensus        82 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~---ivH~di~p~nil~~~~~~~~l~dfg~~~  154 (267)
T cd06628          82 NIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRG---IIHRDIKGANILVDNKGGIKISDFGISK  154 (267)
T ss_pred             EEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcC---cccccCCHHHEEEcCCCCEEecccCCCc
Confidence            3445555555543      33667888899999999999999987   9999999999999999999999999763

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.74  E-value=4.9e-18  Score=176.57  Aligned_cols=122  Identities=26%  Similarity=0.255  Sum_probs=88.5

Q ss_pred             ccccCeEEEEEEEcC-CCcEEEEEEecCCCc---ccHHHHHHHHH---------hccccceecchHH--HHHHhhccccC
Q 006915          413 LGKGGFGPVYKAKFP-GGQQIAVKRLSSASG---QGLEEFKNEIE---------TSNSNATIGANVK--AFVREMKTFSD  477 (626)
Q Consensus       413 lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~e~~---------~~~~~~~~~~~~~--~~~~~~~~~~~  477 (626)
                      ||+|+||.||+|+.. +++.||||++.....   .....+..|..         +++++.+......  .++..++++.+
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            799999999999875 589999999864321   11222222222         2344444332211  23344566665


Q ss_pred             CCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          478 PTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       478 ~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +++.      ..+++.....++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~a  143 (330)
T cd05586          81 GELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYD---IVYRDLKPENILLDATGHIALCDFGLS  143 (330)
T ss_pred             ChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEecCCcC
Confidence            5543      34678888999999999999999998   999999999999999999999999987

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.73  E-value=1.8e-18  Score=182.52  Aligned_cols=142  Identities=22%  Similarity=0.262  Sum_probs=106.7

Q ss_pred             HHHHHHhhcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHHHH------hccccceecchHH
Q 006915          397 FESILAATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNEIE------TSNSNATIGANVK  466 (626)
Q Consensus       397 ~~~l~~~~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e~~------~~~~~~~~~~~~~  466 (626)
                      +.++....++|++.+.||+|+||.||+++.. +++.||+|.+....   ......+.+|+.      +++++++.+....
T Consensus        35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~  114 (371)
T cd05622          35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD  114 (371)
T ss_pred             HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence            3344555688999999999999999999885 58899999986421   122233444543      4667766654332


Q ss_pred             --HHHHhhccccCCCcccC-----CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchh
Q 006915          467 --AFVREMKTFSDPTLSAL-----LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALD  539 (626)
Q Consensus       467 --~~~~~~~~~~~~~l~~~-----l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~  539 (626)
                        .++.+++++.++++..+     ++...+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||++..
T Consensus       115 ~~~~~lv~Ey~~gg~L~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NIll~~~~~ikL~DfG~a~~  191 (371)
T cd05622         115 DRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMK  191 (371)
T ss_pred             CCEEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHEEECCCCCEEEEeCCceeE
Confidence              23345666666665433     566777889999999999999998   99999999999999999999999999965


Q ss_pred             cc
Q 006915          540 MM  541 (626)
Q Consensus       540 ~~  541 (626)
                      +.
T Consensus       192 ~~  193 (371)
T cd05622         192 MN  193 (371)
T ss_pred             cC
Confidence            53

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.73  E-value=1.3e-18  Score=183.16  Aligned_cols=133  Identities=26%  Similarity=0.328  Sum_probs=101.3

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHHHHh------ccccceecchHH--HHHHhh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNEIET------SNSNATIGANVK--AFVREM  472 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~  472 (626)
                      ++|+..+.||+|+||.||+++.. +++.||||.++...   ......+.+|+..      ++++++.+....  .++.++
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~   80 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM   80 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            36888899999999999999875 58999999997422   2233445555543      555555443222  334556


Q ss_pred             ccccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhc
Q 006915          473 KTFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM  540 (626)
Q Consensus       473 ~~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~  540 (626)
                      +++.++++..      .++......++.|++.||+|||+.+   |+||||||+|||++.++.+||+|||++..+
T Consensus        81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~g---ivHrDLkp~NIli~~~~~vkL~DfG~~~~~  151 (360)
T cd05627          81 EFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLG---FIHRDIKPDNLLLDAKGHVKLSDFGLCTGL  151 (360)
T ss_pred             eCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEeeccCCccc
Confidence            6666665543      3677888889999999999999998   999999999999999999999999998644

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.73  E-value=7.8e-18  Score=168.21  Aligned_cols=129  Identities=28%  Similarity=0.372  Sum_probs=98.1

Q ss_pred             CccccccccccCeEEEEEEEc-CCCcEEEEEEecCC--CcccHHHHHHHHHh------ccccceecchHH--HHHHhhcc
Q 006915          406 NFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSA--SGQGLEEFKNEIET------SNSNATIGANVK--AFVREMKT  474 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~--~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~  474 (626)
                      +|+..+.||+|+||.||.++. .+++.+++|.+...  ......++.+|++.      ++++.+.+....  .++..+++
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~   80 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY   80 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence            477889999999999999986 45889999998743  23344566666554      566666654433  22233444


Q ss_pred             ccCCCcc--------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          475 FSDPTLS--------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       475 ~~~~~l~--------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ..++++.        ..+++.++..++.|++.||.|||+.+   ++|+||||+||++++++.+||+|||++
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~ni~~~~~~~~kl~d~~~~  148 (256)
T cd08221          81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAG---ILHRDIKTLNIFLTKAGLIKLGDFGIS  148 (256)
T ss_pred             cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChHhEEEeCCCCEEECcCcce
Confidence            4444332        23677888999999999999999987   999999999999999999999999987

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.73  E-value=1.1e-17  Score=170.75  Aligned_cols=131  Identities=28%  Similarity=0.353  Sum_probs=96.3

Q ss_pred             hhcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCc-ccHHHHHHHH------HhccccceecchHH--HHHHhh
Q 006915          403 ATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASG-QGLEEFKNEI------ETSNSNATIGANVK--AFVREM  472 (626)
Q Consensus       403 ~~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~-~~~~~~~~e~------~~~~~~~~~~~~~~--~~~~~~  472 (626)
                      ++++|.+.+.||+|+||.||+|... +++.||||.+..... .....+.+|+      .++|++.+.+....  .++..+
T Consensus         3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~   82 (291)
T cd07870           3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF   82 (291)
T ss_pred             ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence            4678999999999999999999874 588999999874322 2222334443      44666666554322  112233


Q ss_pred             ccccCCCc-------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          473 KTFSDPTL-------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       473 ~~~~~~~l-------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +++. +++       ...+.+.....++.||+.||.|||+.+   |+|+||||+|||++.++.+||+|||++
T Consensus        83 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~  150 (291)
T cd07870          83 EYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQH---ILHRDLKPQNLLISYLGELKLADFGLA  150 (291)
T ss_pred             eccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEEcCCCcEEEeccccc
Confidence            3332 222       123567788889999999999999997   999999999999999999999999987

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.73  E-value=6.9e-18  Score=172.75  Aligned_cols=128  Identities=29%  Similarity=0.379  Sum_probs=95.9

Q ss_pred             ccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH--HHHHhhccccC
Q 006915          407 FSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK--AFVREMKTFSD  477 (626)
Q Consensus       407 f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~~~~  477 (626)
                      |.....||+|+||.||++... +++.||||.+........+.+.+|+..      ++++.+.+....  .++..++++.+
T Consensus        23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~  102 (297)
T cd06659          23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQG  102 (297)
T ss_pred             HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCC
Confidence            333468999999999999874 689999999975544455566666553      444444433221  12233455554


Q ss_pred             CCcc-----cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          478 PTLS-----ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       478 ~~l~-----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +++.     ..+++..+..++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||++
T Consensus       103 ~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dl~p~Nill~~~~~~kL~dfg~~  164 (297)
T cd06659         103 GALTDIVSQTRLNEEQIATVCESVLQALCYLHSQG---VIHRDIKSDSILLTLDGRVKLSDFGFC  164 (297)
T ss_pred             CCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHeEEccCCcEEEeechhH
Confidence            4443     23678889999999999999999998   999999999999999999999999987

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.73  E-value=9e-18  Score=170.02  Aligned_cols=128  Identities=30%  Similarity=0.466  Sum_probs=97.1

Q ss_pred             ccccccccccCeEEEEEEEc-CCCcEEEEEEecCCC-cccHHHHHHHHHh------ccccceecchHH--HHHHhhcccc
Q 006915          407 FSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSAS-GQGLEEFKNEIET------SNSNATIGANVK--AFVREMKTFS  476 (626)
Q Consensus       407 f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~-~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~~~  476 (626)
                      |+..+.||+|+||.||+|.. .+++.||||.+.... ......+.+|+..      ++++.+++....  .++..+++..
T Consensus         6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   85 (277)
T cd06641           6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG   85 (277)
T ss_pred             hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCC
Confidence            66678999999999999986 468899999986432 2333456666543      566666554332  2233445554


Q ss_pred             CCCcc-----cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          477 DPTLS-----ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       477 ~~~l~-----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++++.     ..+++.....++.|++.||.|||+.+   ++|+||||+||+++.++.++|+|||++
T Consensus        86 ~~~l~~~i~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~Ni~i~~~~~~~l~dfg~~  148 (277)
T cd06641          86 GGSALDLLEPGPLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVA  148 (277)
T ss_pred             CCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHccCC---eecCCCCHHhEEECCCCCEEEeecccc
Confidence            44433     23678889999999999999999987   999999999999999999999999987

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.73  E-value=7.5e-18  Score=174.04  Aligned_cols=124  Identities=27%  Similarity=0.370  Sum_probs=87.4

Q ss_pred             ccccccCeEEEEEEEcC---CCcEEEEEEecCCCcc----cHHHHHHHHHhccccceecchHH----HHHHhhccccCC-
Q 006915          411 NKLGKGGFGPVYKAKFP---GGQQIAVKRLSSASGQ----GLEEFKNEIETSNSNATIGANVK----AFVREMKTFSDP-  478 (626)
Q Consensus       411 ~~lG~G~fG~Vy~~~~~---~~~~vAvK~l~~~~~~----~~~~~~~e~~~~~~~~~~~~~~~----~~~~~~~~~~~~-  478 (626)
                      .+||+|+||.||+|+..   ++..||+|.+......    .+.+..+++.++|++++.+....    .++..+++.... 
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~~l   86 (317)
T cd07867           7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEHDL   86 (317)
T ss_pred             eEeccCCCeeEEEEEecCCCccceEEEEEecCCCCcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCCcH
Confidence            58999999999999874   3578999998753211    11223334445777776654321    111122222110 


Q ss_pred             -------------CcccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEE----CCCCcEEEEecCcc
Q 006915          479 -------------TLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILL----DQEMNPKISDFGLA  537 (626)
Q Consensus       479 -------------~l~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl----~~~~~~kl~DFGla  537 (626)
                                   .....+++..+..++.||+.||.|||+.+   |+||||||+|||+    +.++.+||+|||++
T Consensus        87 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a  159 (317)
T cd07867          87 WHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFA  159 (317)
T ss_pred             HHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEccCCCCCCcEEEeeccce
Confidence                         11224778888999999999999999998   9999999999999    56678999999988

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.73  E-value=1.2e-17  Score=168.11  Aligned_cols=131  Identities=27%  Similarity=0.394  Sum_probs=97.4

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC-----cccHHHHHHHHH------hccccceecchHH----HH
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS-----GQGLEEFKNEIE------TSNSNATIGANVK----AF  468 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~-----~~~~~~~~~e~~------~~~~~~~~~~~~~----~~  468 (626)
                      .+|...+.||+|+||.||+|... .+..||+|.+....     ......+.+|+.      +++++.+.+....    .+
T Consensus         2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (266)
T cd06651           2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL   81 (266)
T ss_pred             CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence            36888899999999999999874 58899999986432     122334555544      3666665543221    12


Q ss_pred             HHhhccccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcch
Q 006915          469 VREMKTFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLAL  538 (626)
Q Consensus       469 ~~~~~~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~  538 (626)
                      ...+++..++++.      ..+++.....++.|++.||.|||+.+   |+|+||||+||+++.++.+||+|||++.
T Consensus        82 ~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~---i~H~~l~p~nil~~~~~~~~l~dfg~~~  154 (266)
T cd06651          82 TIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASK  154 (266)
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCCCcc
Confidence            2334445444443      24678888899999999999999887   9999999999999999999999999873

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.73  E-value=3.5e-18  Score=177.11  Aligned_cols=177  Identities=24%  Similarity=0.212  Sum_probs=115.9

Q ss_pred             ccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHH-------HHhccccceecchHH--HHHHhhccccC
Q 006915          411 NKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNE-------IETSNSNATIGANVK--AFVREMKTFSD  477 (626)
Q Consensus       411 ~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e-------~~~~~~~~~~~~~~~--~~~~~~~~~~~  477 (626)
                      +.||+|+||.||+|+.. +++.||||.+....   .....++..|       +.+++++.+......  .++.+++++.+
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence            36999999999999985 68999999997432   1122333333       234666666543222  23345666666


Q ss_pred             CCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhccccccCCCCCh
Q 006915          478 PTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSKP  551 (626)
Q Consensus       478 ~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~  551 (626)
                      +++.      ..+++.....++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++............. 
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~g---ivH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~-  156 (323)
T cd05575          81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTF-  156 (323)
T ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccccc-
Confidence            6653      24677888889999999999999998   9999999999999999999999999986543322111000 


Q ss_pred             HHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccccCCCCCCCc
Q 006915          552 NEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPA  596 (626)
Q Consensus       552 ~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~P~  596 (626)
                           .....+++.+.-.....+.+.++++|+.+++++.++..|.
T Consensus       157 -----~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf  196 (323)
T cd05575         157 -----CGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPF  196 (323)
T ss_pred             -----cCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCC
Confidence                 0001111111111233455567777777777777776664

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.73  E-value=3.1e-18  Score=177.63  Aligned_cols=125  Identities=26%  Similarity=0.257  Sum_probs=92.0

Q ss_pred             ccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHH-------HHhccccceecchHH--HHHHhhccccC
Q 006915          411 NKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNE-------IETSNSNATIGANVK--AFVREMKTFSD  477 (626)
Q Consensus       411 ~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e-------~~~~~~~~~~~~~~~--~~~~~~~~~~~  477 (626)
                      +.||+|+||.||+++.. +++.||+|.+....   .....++..|       +.+++++.+......  .++.+++++.+
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING   80 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence            36999999999999885 57889999987432   1222233333       234666666543322  23345666666


Q ss_pred             CCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcch
Q 006915          478 PTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLAL  538 (626)
Q Consensus       478 ~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~  538 (626)
                      +++..      .+.......++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++.
T Consensus        81 ~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~g---iiHrDlkp~Nili~~~~~~kl~DfG~a~  144 (325)
T cd05602          81 GELFYHLQRERCFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCK  144 (325)
T ss_pred             CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEEccCCCCc
Confidence            65533      3456677789999999999999998   9999999999999999999999999873

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.73  E-value=1.6e-17  Score=169.71  Aligned_cols=130  Identities=24%  Similarity=0.341  Sum_probs=95.9

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCc--ccHHHHHHHHHh-------ccccceecchHH--H-----
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASG--QGLEEFKNEIET-------SNSNATIGANVK--A-----  467 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~--~~~~~~~~e~~~-------~~~~~~~~~~~~--~-----  467 (626)
                      ++|++.+.||+|+||.||+|... +++.||||.++....  .....+.+|+..       ++++++.+....  .     
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~   80 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS   80 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence            46888899999999999999875 589999999864321  223455566543       455555543322  1     


Q ss_pred             HHHhhccccCCCc-----------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECC-CCcEEEEecC
Q 006915          468 FVREMKTFSDPTL-----------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQ-EMNPKISDFG  535 (626)
Q Consensus       468 ~~~~~~~~~~~~l-----------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~-~~~~kl~DFG  535 (626)
                      ++..++++.+ ++           ...+++.....++.||+.||.|||+.+   |+||||||+||+++. ++.+||+|||
T Consensus        81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~~~nil~~~~~~~~kl~dfg  156 (295)
T cd07837          81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHG---VMHRDLKPQNLLVDKQKGLLKIADLG  156 (295)
T ss_pred             EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEecCCCeEEEeecc
Confidence            1223333332 22           234688899999999999999999997   999999999999998 8899999999


Q ss_pred             cch
Q 006915          536 LAL  538 (626)
Q Consensus       536 la~  538 (626)
                      ++.
T Consensus       157 ~~~  159 (295)
T cd07837         157 LGR  159 (295)
T ss_pred             cce
Confidence            873

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.73  E-value=1.5e-17  Score=169.41  Aligned_cols=130  Identities=28%  Similarity=0.422  Sum_probs=101.0

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCc-ccHHHHHHHHHh------ccccceecchHH----HHHHhh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASG-QGLEEFKNEIET------SNSNATIGANVK----AFVREM  472 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~-~~~~~~~~e~~~------~~~~~~~~~~~~----~~~~~~  472 (626)
                      ++|...+.||.|++|.||++... +++.+|+|.+..... ....++.+|++.      ++++.+.+.+..    .++..+
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   80 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM   80 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence            46788899999999999999984 588999999875332 344567777654      666666654432    233455


Q ss_pred             ccccCCCccc----------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          473 KTFSDPTLSA----------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       473 ~~~~~~~l~~----------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +++.++++..          .++......++.||+.||.|||+.+   ++|+||+|+||+++.++.+||+|||++
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~  152 (287)
T cd06621          81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK---IIHRDIKPSNILLTRKGQVKLCDFGVS  152 (287)
T ss_pred             EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecCCeEEEeecccc
Confidence            6665555432          3567778899999999999999988   999999999999999999999999986

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.73  E-value=7.5e-18  Score=170.48  Aligned_cols=129  Identities=26%  Similarity=0.466  Sum_probs=98.1

Q ss_pred             CccccccccccCeEEEEEEEc-CCCcEEEEEEecCCC-cccHHHHHHHHH---------hccccceecchHH--HHHHhh
Q 006915          406 NFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSAS-GQGLEEFKNEIE---------TSNSNATIGANVK--AFVREM  472 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~-~~~~~~~~~e~~---------~~~~~~~~~~~~~--~~~~~~  472 (626)
                      .|+..+.||+|+||.||+|.. .+++.||||.+.... .....++.+|+.         +++++.+.+.+..  .++..+
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~   81 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM   81 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence            467778999999999999997 468999999987532 233445555544         3555555554332  122345


Q ss_pred             ccccCCCcc-----cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          473 KTFSDPTLS-----ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       473 ~~~~~~~l~-----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +++.++++.     ..+++...+.++.|++.||.|||+.+   |+|+||+|+||++++++.++|+|||++
T Consensus        82 e~~~~~~L~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~  148 (277)
T cd06917          82 EYAEGGSVRTLMKAGPIAEKYISVIIREVLVALKYIHKVG---VIHRDIKAANILVTNTGNVKLCDFGVA  148 (277)
T ss_pred             ecCCCCcHHHHHHccCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHHEEEcCCCCEEEccCCce
Confidence            555554443     24678888999999999999999998   999999999999999999999999977

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.73  E-value=1e-17  Score=184.77  Aligned_cols=132  Identities=28%  Similarity=0.380  Sum_probs=82.9

Q ss_pred             hhcCccccccccccCeEEEEEEEcC-C----CcEEEEEEecCCCcccHHHHHHH-HHhc---cccceecc--------hH
Q 006915          403 ATDNFSEANKLGKGGFGPVYKAKFP-G----GQQIAVKRLSSASGQGLEEFKNE-IETS---NSNATIGA--------NV  465 (626)
Q Consensus       403 ~~~~f~~~~~lG~G~fG~Vy~~~~~-~----~~~vAvK~l~~~~~~~~~~~~~e-~~~~---~~~~~~~~--------~~  465 (626)
                      ..++|.+.+.||+|+||.||+|++. +    +..||||++......  +.+..+ +...   ........        ..
T Consensus       130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~--e~~~~e~l~~~~~~~~~~~~~~~~~~~~~~~~  207 (566)
T PLN03225        130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV--EIWMNERVRRACPNSCADFVYGFLEPVSSKKE  207 (566)
T ss_pred             ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh--HHHHHHHHHhhchhhHHHHHHhhhcccccccC
Confidence            4678999999999999999999984 4    689999998643211  111111 1100   00000000        00


Q ss_pred             HHHHHhhccccCCCcccC--------------------------CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCC
Q 006915          466 KAFVREMKTFSDPTLSAL--------------------------LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTS  519 (626)
Q Consensus       466 ~~~~~~~~~~~~~~l~~~--------------------------l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~  519 (626)
                      ..++..+++...+++..+                          ........++.||+.||.|||+.+   |+||||||+
T Consensus       208 ~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~g---IiHRDLKP~  284 (566)
T PLN03225        208 DEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTG---IVHRDVKPQ  284 (566)
T ss_pred             CceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCC---EEeCcCCHH
Confidence            011111222222221111                          112234578999999999999987   999999999


Q ss_pred             CeEECC-CCcEEEEecCcchh
Q 006915          520 NILLDQ-EMNPKISDFGLALD  539 (626)
Q Consensus       520 NILl~~-~~~~kl~DFGla~~  539 (626)
                      |||++. ++.+||+|||+|..
T Consensus       285 NILl~~~~~~~KL~DFGlA~~  305 (566)
T PLN03225        285 NIIFSEGSGSFKIIDLGAAAD  305 (566)
T ss_pred             HEEEeCCCCcEEEEeCCCccc
Confidence            999986 58899999999853

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.73  E-value=5.6e-18  Score=162.11  Aligned_cols=130  Identities=27%  Similarity=0.395  Sum_probs=97.1

Q ss_pred             hcCccccccccccCeEEEEEEEcC---C--CcEEEEEEecCCC------ccc--HHHHHHHHHhccccceecchHH----
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP---G--GQQIAVKRLSSAS------GQG--LEEFKNEIETSNSNATIGANVK----  466 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~---~--~~~vAvK~l~~~~------~~~--~~~~~~e~~~~~~~~~~~~~~~----  466 (626)
                      ...|+....||+|.||.||++.-.   +  ...+|||+++...      ...  +-.+.+|+.++|++.+....+.    
T Consensus        23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~  102 (438)
T KOG0666|consen   23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKK  102 (438)
T ss_pred             HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCce
Confidence            456788889999999999999542   2  3379999998531      111  2346788888888777654333    


Q ss_pred             ----------HHHHhhccccCCCcccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCC----CcEEEE
Q 006915          467 ----------AFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQE----MNPKIS  532 (626)
Q Consensus       467 ----------~~~~~~~~~~~~~l~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~----~~~kl~  532 (626)
                                .++...... .......++.....+|+.||+.|+.|||++-   |+||||||.|||+..+    |.+||+
T Consensus       103 v~l~fdYAEhDL~~II~fH-r~~~~~~lp~~mvKsilwQil~Gv~YLH~NW---vlHRDLKPaNIlvmgdgperG~VKIa  178 (438)
T KOG0666|consen  103 VWLLFDYAEHDLWHIIKFH-RASKAKQLPRSMVKSILWQILDGVHYLHSNW---VLHRDLKPANILVMGDGPERGRVKIA  178 (438)
T ss_pred             EEEEehhhhhhHHHHHHHh-ccchhccCCHHHHHHHHHHHHhhhHHHhhhh---eeeccCCcceEEEeccCCccCeeEee
Confidence                      111222222 2222357888899999999999999999997   9999999999999877    899999


Q ss_pred             ecCcc
Q 006915          533 DFGLA  537 (626)
Q Consensus       533 DFGla  537 (626)
                      |||++
T Consensus       179 DlGla  183 (438)
T KOG0666|consen  179 DLGLA  183 (438)
T ss_pred             cccHH
Confidence            99998

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.73  E-value=4.2e-18  Score=176.69  Aligned_cols=178  Identities=23%  Similarity=0.199  Sum_probs=117.2

Q ss_pred             ccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHH-------HHhccccceecchHH--HHHHhhccccC
Q 006915          411 NKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNE-------IETSNSNATIGANVK--AFVREMKTFSD  477 (626)
Q Consensus       411 ~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e-------~~~~~~~~~~~~~~~--~~~~~~~~~~~  477 (626)
                      +.||+|+||.||+++.. +++.||||++....   .....++..|       +.+++++++......  .++..++++.+
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG   80 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence            46999999999999874 68999999987431   1222333333       234667766544322  23345566666


Q ss_pred             CCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhccccccCCCCCh
Q 006915          478 PTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSKP  551 (626)
Q Consensus       478 ~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~  551 (626)
                      +++.      ..+++.....++.||+.||.|||+.+   |+||||||+|||+++++.+||+|||++............  
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~g---ivH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~--  155 (325)
T cd05604          81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSIN---IVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTT--  155 (325)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCccc--
Confidence            5542      34678888899999999999999998   999999999999999999999999998643221110000  


Q ss_pred             HHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccccCCCCCCCce
Q 006915          552 NEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAF  597 (626)
Q Consensus       552 ~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~P~~  597 (626)
                          ......++..+.-.....+...++++|+.++.++.++..|..
T Consensus       156 ----~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~  197 (325)
T cd05604         156 ----FCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFY  197 (325)
T ss_pred             ----ccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCC
Confidence                000011111111122334556677888888788887777743

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.73  E-value=1.7e-18  Score=180.12  Aligned_cols=182  Identities=23%  Similarity=0.241  Sum_probs=119.7

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHHHHh------ccccceecchHH--HHHHhh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNEIET------SNSNATIGANVK--AFVREM  472 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~  472 (626)
                      ++|.+.+.||+|+||.||+++.. +++.||||.+....   ......+.+|+..      ++++.+......  .++.++
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~   80 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM   80 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            46888999999999999999875 57899999987421   1223335555443      444544433222  233456


Q ss_pred             ccccCCCccc-------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhcccccc
Q 006915          473 KTFSDPTLSA-------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKL  545 (626)
Q Consensus       473 ~~~~~~~l~~-------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~  545 (626)
                      +++.++++..       .+++.....++.|++.||+|||+.+   |+||||||+|||++.++.+||+|||++..+.....
T Consensus        81 Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~---iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~  157 (331)
T cd05624          81 DYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLH---YVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGT  157 (331)
T ss_pred             eCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCchHHEEEcCCCCEEEEeccceeeccCCCc
Confidence            6666665533       4567778889999999999999988   99999999999999999999999999865433211


Q ss_pred             CC--------CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccccCCCCCCCce
Q 006915          546 HA--------SSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAF  597 (626)
Q Consensus       546 ~~--------~~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~P~~  597 (626)
                      ..        .+...+.   +.    .. .......+...++++|+.+++++.+++.|..
T Consensus       158 ~~~~~~~gt~~y~aPE~---~~----~~-~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~  209 (331)
T cd05624         158 VQSSVAVGTPDYISPEI---LQ----AM-EDGMGKYGPECDWWSLGVCMYEMLYGETPFY  209 (331)
T ss_pred             eeeccccCCcccCCHHH---Hh----cc-ccCCCCCCCcccEEeeehhhhhhhhCCCCcc
Confidence            10        0111111   00    00 0011233445667777777777777776643

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.73  E-value=9e-18  Score=170.54  Aligned_cols=128  Identities=25%  Similarity=0.404  Sum_probs=93.0

Q ss_pred             CccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC--cccHHHHHHHH------HhccccceecchHH--HHHHhhcc
Q 006915          406 NFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS--GQGLEEFKNEI------ETSNSNATIGANVK--AFVREMKT  474 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~e~------~~~~~~~~~~~~~~--~~~~~~~~  474 (626)
                      +|+..+.||+|+||.||+|+.. +|+.||+|+++...  ......+.+|+      .+++++++.+....  .++..+++
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY   80 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence            4677889999999999999885 58999999987432  11223344444      34555554433221  11222333


Q ss_pred             ccCCCc-------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          475 FSDPTL-------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       475 ~~~~~l-------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      .. +++       ...+++.....++.||++||.|||+.+   |+||||||+||+++.++.+||+|||++
T Consensus        81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~  146 (284)
T cd07839          81 CD-QDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHN---VLHRDLKPQNLLINKNGELKLADFGLA  146 (284)
T ss_pred             CC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEcCCCcEEECccchh
Confidence            32 121       234788899999999999999999998   999999999999999999999999987

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.73  E-value=1.6e-18  Score=180.72  Aligned_cols=127  Identities=31%  Similarity=0.421  Sum_probs=96.9

Q ss_pred             cccccccCeEEEEEEEcC-CCcEEEEEEec----CCCcccHHHHHHHHHh------ccccceecchHH----HHHHhhcc
Q 006915          410 ANKLGKGGFGPVYKAKFP-GGQQIAVKRLS----SASGQGLEEFKNEIET------SNSNATIGANVK----AFVREMKT  474 (626)
Q Consensus       410 ~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~----~~~~~~~~~~~~e~~~------~~~~~~~~~~~~----~~~~~~~~  474 (626)
                      ..+||+|+|-+||+|... +|.+||--.++    ..+...++.|..|+++      +|++++...-+.    .+..+.+.
T Consensus        45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL  124 (632)
T KOG0584|consen   45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL  124 (632)
T ss_pred             hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence            368999999999999884 47778744333    1234456788888875      667776543222    33445566


Q ss_pred             ccCCCcccC------CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCC-CcEEEEecCcc
Q 006915          475 FSDPTLSAL------LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQE-MNPKISDFGLA  537 (626)
Q Consensus       475 ~~~~~l~~~------l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~-~~~kl~DFGla  537 (626)
                      +..|+|..+      ++.+...++++||++||.|||++. |||||||||..||+|+.+ |.+||.|+|||
T Consensus       125 ~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~-PPIIHRDLKCDNIFinG~~G~VKIGDLGLA  193 (632)
T KOG0584|consen  125 FTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQD-PPIIHRDLKCDNIFVNGNLGEVKIGDLGLA  193 (632)
T ss_pred             ccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCC-CCccccccccceEEEcCCcCceeecchhHH
Confidence            777777655      456667789999999999999985 899999999999999765 88999999999

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.73  E-value=1.6e-17  Score=170.44  Aligned_cols=129  Identities=23%  Similarity=0.386  Sum_probs=95.9

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC-cccHHHHHHH------HHhccccceecchHH--HHHHhhcc
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS-GQGLEEFKNE------IETSNSNATIGANVK--AFVREMKT  474 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~e------~~~~~~~~~~~~~~~--~~~~~~~~  474 (626)
                      ++|...+.||+|+||.||+|+.. +++.||+|.++... ......+.+|      +.++|++.+.+....  .++..+++
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~   85 (301)
T cd07873           6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   85 (301)
T ss_pred             cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence            56888899999999999999875 58899999987432 2222334444      345777777665432  11222333


Q ss_pred             ccCCCc-------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          475 FSDPTL-------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       475 ~~~~~l-------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +. +++       ...+++.....++.||+.||+|||+.+   |+|+||||+|||+++++.+||+|||++
T Consensus        86 ~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~  151 (301)
T cd07873          86 LD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRK---VLHRDLKPQNLLINERGELKLADFGLA  151 (301)
T ss_pred             cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHHHEEECCCCcEEECcCcch
Confidence            32 222       223677888899999999999999987   999999999999999999999999987

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.73  E-value=2e-17  Score=168.02  Aligned_cols=128  Identities=27%  Similarity=0.432  Sum_probs=95.7

Q ss_pred             CccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC--cccHHHHHHHHH------hccccceecchHH--HHHHhhcc
Q 006915          406 NFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS--GQGLEEFKNEIE------TSNSNATIGANVK--AFVREMKT  474 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~~~  474 (626)
                      +|+..+.||+|+||.||+|+.. +++.||||++....  ......+.+|++      +++++++.+....  .++..+++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF   80 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence            4778899999999999999874 58999999987432  122234555554      4666666554322  12223333


Q ss_pred             ccCCCc--------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          475 FSDPTL--------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       475 ~~~~~l--------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +. +++        ...+++.....++.|++.||+|||+.+   ++|+||+|+||++++++.+||+|||++
T Consensus        81 ~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~---i~H~~l~p~nill~~~~~~~l~dfg~~  147 (284)
T cd07860          81 LH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLA  147 (284)
T ss_pred             cc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEeeccch
Confidence            32 221        234788899999999999999999987   999999999999999999999999987

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.73  E-value=3.4e-18  Score=175.56  Aligned_cols=174  Identities=20%  Similarity=0.303  Sum_probs=127.5

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC--cccHHHHHHH------HHhccccceecchHH--H-HHHhh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS--GQGLEEFKNE------IETSNSNATIGANVK--A-FVREM  472 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~e------~~~~~~~~~~~~~~~--~-~~~~~  472 (626)
                      ++|...+++|+|+||.++..+++ +++.+++|.+....  ........+|      +.+++++......+.  . +..++
T Consensus         4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm   83 (426)
T KOG0589|consen    4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM   83 (426)
T ss_pred             chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence            56788899999999999999885 57899999997432  2222233334      344666666554443  2 34567


Q ss_pred             ccccCCCcccC--------CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhccccc
Q 006915          473 KTFSDPTLSAL--------LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQK  544 (626)
Q Consensus       473 ~~~~~~~l~~~--------l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~  544 (626)
                      +|..++++.+.        ++.++...++.|++.|+.|||++.   |+|||||+.||+++.+..+||.|||+|+.+..+.
T Consensus        84 ~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~---iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~  160 (426)
T KOG0589|consen   84 EYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENR---VLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED  160 (426)
T ss_pred             eecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhh---hhcccchhhhhhccccCceeecchhhhhhcCCch
Confidence            78888876543        567778899999999999999876   9999999999999999999999999993322211


Q ss_pred             -------------------------------------------------------------cCCCCChHHHHHHHHHHHH
Q 006915          545 -------------------------------------------------------------LHASSKPNEILKCINVGLL  563 (626)
Q Consensus       545 -------------------------------------------------------------~~~~~~~~~~~~~~~~~~~  563 (626)
                                                                                   .....+......+..++..
T Consensus       161 ~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Plp~~ys~el~~lv~~  240 (426)
T KOG0589|consen  161 SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSPLPSMYSSELRSLVKS  240 (426)
T ss_pred             hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCCCCccccHHHHHHHHH
Confidence                                                                         0011122233456677788


Q ss_pred             hcccCCCCCCCHHHHHHH
Q 006915          564 CVQEDPNDRPTMSDVVIM  581 (626)
Q Consensus       564 C~~~~p~~RPs~~~vl~~  581 (626)
                      |++.+|..||++.+++.+
T Consensus       241 ~l~~~P~~RPsa~~LL~~  258 (426)
T KOG0589|consen  241 MLRKNPEHRPSALELLRR  258 (426)
T ss_pred             HhhcCCccCCCHHHHhhC
Confidence            999999999999999854

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.73  E-value=1.3e-17  Score=166.67  Aligned_cols=129  Identities=26%  Similarity=0.395  Sum_probs=96.6

Q ss_pred             CccccccccccCeEEEEEEEcC-CCcEEEEEEecCC--CcccHHHHHHHHHh------ccccceecchHH--HHHHhhcc
Q 006915          406 NFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSA--SGQGLEEFKNEIET------SNSNATIGANVK--AFVREMKT  474 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~--~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~  474 (626)
                      +|++.+.||+|+||.||+++.. +++.||||++...  ......++.+|+..      ++++.+.+....  .++..+++
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY   80 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence            4778899999999999999874 5889999998642  22333456666543      555555544322  12233444


Q ss_pred             ccCCCcc--------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          475 FSDPTLS--------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       475 ~~~~~l~--------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +.++++.        ..+++.+++.++.|++.||.|||+.+   ++|+||+|+|||++.++.++|+|||++
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~l~~~nil~~~~~~~~l~d~~~~  148 (256)
T cd08218          81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTIKLGDFGIA  148 (256)
T ss_pred             CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEEeeccce
Confidence            4444432        23578888999999999999999987   999999999999999999999999987

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.73  E-value=1.9e-17  Score=166.37  Aligned_cols=131  Identities=27%  Similarity=0.407  Sum_probs=99.1

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC-----cccHHHHHHHHH------hccccceecchHH----HH
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS-----GQGLEEFKNEIE------TSNSNATIGANVK----AF  468 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~-----~~~~~~~~~e~~------~~~~~~~~~~~~~----~~  468 (626)
                      ++|++.+.||+|+||.||+|... ++..||||.+....     ....+.+.+|+.      +++++...+....    .+
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL   81 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence            46888899999999999999874 58999999986321     122345555654      3666666654332    12


Q ss_pred             HHhhccccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcch
Q 006915          469 VREMKTFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLAL  538 (626)
Q Consensus       469 ~~~~~~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~  538 (626)
                      ...+++..++++..      .+++...++++.|++.||+|||+.+   |+|+||||+|||++.++.+||+|||++.
T Consensus        82 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~Dfg~~~  154 (265)
T cd06652          82 SIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNM---IVHRDIKGANILRDSVGNVKLGDFGASK  154 (265)
T ss_pred             EEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEecCCCCEEECcCcccc
Confidence            23455555555543      3567788899999999999999998   9999999999999999999999999773

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.73  E-value=1.4e-17  Score=170.12  Aligned_cols=130  Identities=26%  Similarity=0.401  Sum_probs=99.9

Q ss_pred             cCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCCcccHHHHHHHHH------hccccceecchHH--HHHHhhccc
Q 006915          405 DNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQGLEEFKNEIE------TSNSNATIGANVK--AFVREMKTF  475 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~~~~  475 (626)
                      ++|...+.||+|+||.||++.. .+++.||+|.+........+.+.+|+.      +++++.+.+.+..  .++.++++.
T Consensus        19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~   98 (293)
T cd06647          19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL   98 (293)
T ss_pred             hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence            5788889999999999999986 468899999987544444455666654      3555555443322  223345555


Q ss_pred             cCCCccc-----CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          476 SDPTLSA-----LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       476 ~~~~l~~-----~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      .++++..     .+++..+..++.|++.||.|||+.+   ++|+||||+||+++.++.+||+|||++
T Consensus        99 ~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~g---i~H~dL~p~Nili~~~~~~kL~dfg~~  162 (293)
T cd06647          99 AGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFC  162 (293)
T ss_pred             CCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCC---EeeccCCHHHEEEcCCCCEEEccCcce
Confidence            5555543     4678888999999999999999998   999999999999999999999999976

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.72  E-value=1.1e-17  Score=168.66  Aligned_cols=132  Identities=33%  Similarity=0.493  Sum_probs=102.1

Q ss_pred             HhhcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCcccHHHHHHHHH-------hccccceecchHHH------
Q 006915          402 AATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQGLEEFKNEIE-------TSNSNATIGANVKA------  467 (626)
Q Consensus       402 ~~~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~e~~-------~~~~~~~~~~~~~~------  467 (626)
                      .++++|++.+.||+|+||.||+|... +++.+|+|.+..... ....+.+|+.       +++++++.+.....      
T Consensus         3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~   81 (275)
T cd06608           3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND   81 (275)
T ss_pred             CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence            45788999999999999999999985 578999999875432 3345666653       46666666554321      


Q ss_pred             --HHHhhccccCCCcc----------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecC
Q 006915          468 --FVREMKTFSDPTLS----------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFG  535 (626)
Q Consensus       468 --~~~~~~~~~~~~l~----------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFG  535 (626)
                        ++..++++.++++.          ..+++..+..++.|++.||.|||+.+   ++|+||+|+||++++++.+||+|||
T Consensus        82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~---i~H~~l~p~ni~~~~~~~~~l~d~~  158 (275)
T cd06608          82 DQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENK---VIHRDIKGQNILLTKNAEVKLVDFG  158 (275)
T ss_pred             eEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEEccCCeEEECCCc
Confidence              23445555544332          35678888899999999999999988   9999999999999999999999999


Q ss_pred             cc
Q 006915          536 LA  537 (626)
Q Consensus       536 la  537 (626)
                      ++
T Consensus       159 ~~  160 (275)
T cd06608         159 VS  160 (275)
T ss_pred             cc
Confidence            86

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.72  E-value=1.4e-17  Score=169.14  Aligned_cols=129  Identities=29%  Similarity=0.418  Sum_probs=98.7

Q ss_pred             CccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC--cccHHHHHHHHH------hccccceecchHH--HHHHhhcc
Q 006915          406 NFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS--GQGLEEFKNEIE------TSNSNATIGANVK--AFVREMKT  474 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~~~  474 (626)
                      +|++.+.||+|+||.||+|+.. +++.||||++....  ......+.+|+.      +++++.+.+....  .++.++++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~   80 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY   80 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence            4777899999999999999874 68999999987543  223455666654      4666666554322  22233444


Q ss_pred             ccCCCcc-------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcch
Q 006915          475 FSDPTLS-------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLAL  538 (626)
Q Consensus       475 ~~~~~l~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~  538 (626)
                      . ++++.       ..+++.++..++.||+.||+|||+.+   ++|+||||+||+++.++.++|+|||++.
T Consensus        81 ~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~~~~~~~~~l~dfg~~~  147 (286)
T cd07832          81 M-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANG---IMHRDLKPANLLISADGVLKIADFGLAR  147 (286)
T ss_pred             c-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCHHHEEEcCCCcEEEeeeeecc
Confidence            4 44443       34678899999999999999999998   9999999999999999999999999873

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.72  E-value=2.4e-17  Score=170.37  Aligned_cols=127  Identities=30%  Similarity=0.455  Sum_probs=96.4

Q ss_pred             ccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCc---ccHHHHHHHHH------hccccceecchHH--HHHHhhcc
Q 006915          407 FSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASG---QGLEEFKNEIE------TSNSNATIGANVK--AFVREMKT  474 (626)
Q Consensus       407 f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~~~  474 (626)
                      |...+.||+|+||.||+++.. ++..||+|.+.....   .....+.+|++      +++++.+.+.+..  ..+..+++
T Consensus        27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  106 (317)
T cd06635          27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY  106 (317)
T ss_pred             hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence            666789999999999999874 588999999874322   22345656654      4677777665443  22233444


Q ss_pred             ccCCCc-------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          475 FSDPTL-------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       475 ~~~~~l-------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ..+ ++       ...+++.++..++.|++.||.|||+.+   |+||||+|+||+++.++.+||+|||++
T Consensus       107 ~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~---i~H~dL~p~Nil~~~~~~~kl~dfg~~  172 (317)
T cd06635         107 CLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSA  172 (317)
T ss_pred             CCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcccEEECCCCCEEEecCCCc
Confidence            432 21       234788999999999999999999998   999999999999999999999999976

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.72  E-value=7.9e-18  Score=190.37  Aligned_cols=135  Identities=25%  Similarity=0.340  Sum_probs=101.7

Q ss_pred             hhcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCC--CcccHHHHHHHHH------hccccceecchHH----HHH
Q 006915          403 ATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSA--SGQGLEEFKNEIE------TSNSNATIGANVK----AFV  469 (626)
Q Consensus       403 ~~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~--~~~~~~~~~~e~~------~~~~~~~~~~~~~----~~~  469 (626)
                      ..++|.+.+.||+|+||.||+++.. .+..||+|.+...  .......|..|+.      +++++.+++....    .++
T Consensus        11 ~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ly   90 (1021)
T PTZ00266         11 RLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLY   90 (1021)
T ss_pred             ccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEE
Confidence            4568999999999999999999885 4788999998743  2223445556654      4777877764422    244


Q ss_pred             HhhccccCCCcc----------cCCCHHHHHHHHHHHHHHHHHHHhCCC----CceEecCCCCCCeEECC----------
Q 006915          470 REMKTFSDPTLS----------ALLHWEMRFNIIIGIARGLLYLHQDSR----LRIIHRDLKTSNILLDQ----------  525 (626)
Q Consensus       470 ~~~~~~~~~~l~----------~~l~~~~~~~i~~~ia~gL~yLH~~~~----~~ivHrDlkp~NILl~~----------  525 (626)
                      .+++++..++|.          ..|++...+.|+.||+.||.|||+.+.    .+||||||||+||||+.          
T Consensus        91 IVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~  170 (1021)
T PTZ00266         91 ILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITA  170 (1021)
T ss_pred             EEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccc
Confidence            556666666553          247788899999999999999998542    34999999999999964          


Q ss_pred             -------CCcEEEEecCcc
Q 006915          526 -------EMNPKISDFGLA  537 (626)
Q Consensus       526 -------~~~~kl~DFGla  537 (626)
                             ...+||+|||++
T Consensus       171 ~~~n~ng~~iVKLsDFGlA  189 (1021)
T PTZ00266        171 QANNLNGRPIAKIGDFGLS  189 (1021)
T ss_pred             cccccCCCCceEEccCCcc
Confidence                   344899999987

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.72  E-value=2.1e-17  Score=172.78  Aligned_cols=130  Identities=28%  Similarity=0.418  Sum_probs=95.8

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC--cccHHHHHHHHH------hccccceecchHHH-------
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS--GQGLEEFKNEIE------TSNSNATIGANVKA-------  467 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~e~~------~~~~~~~~~~~~~~-------  467 (626)
                      .++|...+.||+|+||.||+|+.. +++.||||++....  ......+.+|+.      +++++++.+.....       
T Consensus        14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~   93 (342)
T cd07879          14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ   93 (342)
T ss_pred             ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence            378999999999999999999874 68999999987431  122234445544      46666665543211       


Q ss_pred             -HHHhhccccCCCc----ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          468 -FVREMKTFSDPTL----SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       468 -~~~~~~~~~~~~l----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                       ++..++++. ..+    ...+++.....++.|++.||+|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus        94 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dlkp~NIll~~~~~~kL~dfg~~  164 (342)
T cd07879          94 DFYLVMPYMQ-TDLQKIMGHPLSEDKVQYLVYQMLCGLKYIHSAG---IIHRDLKPGNLAVNEDCELKILDFGLA  164 (342)
T ss_pred             eEEEEecccc-cCHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCCCC
Confidence             112222221 122    225778888999999999999999998   999999999999999999999999987

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.72  E-value=1.1e-17  Score=169.06  Aligned_cols=130  Identities=31%  Similarity=0.441  Sum_probs=98.5

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC-cccHHHHHHHHH------hccccceecchHH--HHHHhhcc
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS-GQGLEEFKNEIE------TSNSNATIGANVK--AFVREMKT  474 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~~~  474 (626)
                      ++|+..+.||.|+||.||+|+.. +++.||+|.+.... ......+.+|+.      +++++.+.+....  .+...+++
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (274)
T cd06609           1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY   80 (274)
T ss_pred             ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence            35777899999999999999875 58899999987543 233445555554      4666666554332  12233344


Q ss_pred             ccCCCccc-----CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          475 FSDPTLSA-----LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       475 ~~~~~l~~-----~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +.++++..     .+++.....++.|++.||.|||+.+   ++|+||+|+||++++++.++|+|||++
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~  145 (274)
T cd06609          81 CGGGSCLDLLKPGKLDETYIAFILREVLLGLEYLHEEG---KIHRDIKAANILLSEEGDVKLADFGVS  145 (274)
T ss_pred             eCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEcccccc
Confidence            44443322     5788899999999999999999987   999999999999999999999999987

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.72  E-value=2.5e-18  Score=176.15  Aligned_cols=128  Identities=27%  Similarity=0.377  Sum_probs=98.3

Q ss_pred             hcCccccccccccCeEEEEEEEcCCCcEEEEEEec--CCCcccHHHHHHHHHh-------ccccceecchHH--HHHHhh
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLS--SASGQGLEEFKNEIET-------SNSNATIGANVK--AFVREM  472 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~--~~~~~~~~~~~~e~~~-------~~~~~~~~~~~~--~~~~~~  472 (626)
                      ...|++.++||.||.+.||++...+.+.+|+|++.  ..+.+....|.+|++.       .++++++.+.+.  .++.+|
T Consensus       360 g~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvm  439 (677)
T KOG0596|consen  360 GREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVM  439 (677)
T ss_pred             cchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEe
Confidence            44588889999999999999999888899999876  3456778889999986       456666665544  222333


Q ss_pred             ccccCCCcccC--------CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          473 KTFSDPTLSAL--------LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       473 ~~~~~~~l~~~--------l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      |+ .+-+|.++        ..| .+..+..|++.++.++|.++   |||.||||.|+|+- .|.+||+|||+|
T Consensus       440 E~-Gd~DL~kiL~k~~~~~~~~-~lk~ywkqML~aV~~IH~~g---IVHSDLKPANFLlV-kG~LKLIDFGIA  506 (677)
T KOG0596|consen  440 EC-GDIDLNKILKKKKSIDPDW-FLKFYWKQMLLAVKTIHQHG---IVHSDLKPANFLLV-KGRLKLIDFGIA  506 (677)
T ss_pred             ec-ccccHHHHHHhccCCCchH-HHHHHHHHHHHHHHHHHHhc---eeecCCCcccEEEE-eeeEEeeeechh
Confidence            32 22233222        224 56778999999999999998   99999999999995 468999999999

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.72  E-value=2.6e-17  Score=165.53  Aligned_cols=129  Identities=29%  Similarity=0.494  Sum_probs=96.5

Q ss_pred             CccccccccccCeEEEEEEEc-CCCcEEEEEEecCCCc------ccHHHHHHHHHh------ccccceecchHH--HHHH
Q 006915          406 NFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASG------QGLEEFKNEIET------SNSNATIGANVK--AFVR  470 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~------~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~  470 (626)
                      +|+..+.||+|+||.||+|.. .+++.||+|.+.....      ...+.+.+|++.      ++++++.+....  .+..
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   80 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL   80 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence            467788999999999999986 5689999999874321      123556666554      556655554332  2223


Q ss_pred             hhccccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCC-cEEEEecCcc
Q 006915          471 EMKTFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEM-NPKISDFGLA  537 (626)
Q Consensus       471 ~~~~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~-~~kl~DFGla  537 (626)
                      .+++..++++.      ..+++.....++.|++.||.|||+.+   ++|+||||+||+++.++ .+||+|||++
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~---i~H~~i~~~nil~~~~~~~~~l~dfg~~  151 (268)
T cd06630          81 FVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQ---IIHRDVKGANLLIDSTGQRLRIADFGAA  151 (268)
T ss_pred             EEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEcccccc
Confidence            44555555543      24677888999999999999999998   99999999999998776 5999999987

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.72  E-value=1.9e-17  Score=166.29  Aligned_cols=130  Identities=28%  Similarity=0.388  Sum_probs=96.0

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC-cccHHHHHHHHHh------ccccceecchHH--HHHHhhcc
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS-GQGLEEFKNEIET------SNSNATIGANVK--AFVREMKT  474 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~  474 (626)
                      ++|+..+.||+|+||.||++... +++.||+|.+.... .....++.+|++.      ++++.+.+.+..  .++..+++
T Consensus         1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (265)
T cd06605           1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY   80 (265)
T ss_pred             CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence            35677789999999999999885 58999999987543 2344567777654      444443332221  11123344


Q ss_pred             ccCCCcc-------cCCCHHHHHHHHHHHHHHHHHHHh-CCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          475 FSDPTLS-------ALLHWEMRFNIIIGIARGLLYLHQ-DSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       475 ~~~~~l~-------~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ..+.++.       ..++......++.|++.||+|||+ .+   ++|+||||+||++++++.+||+|||++
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~---i~H~dl~~~ni~~~~~~~~~l~d~g~~  148 (265)
T cd06605          81 MDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHK---IIHRDVKPSNILVNSRGQIKLCDFGVS  148 (265)
T ss_pred             cCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCC---eecCCCCHHHEEECCCCCEEEeecccc
Confidence            4434332       346677888999999999999999 76   999999999999999999999999987

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.72  E-value=2.2e-18  Score=179.32  Aligned_cols=134  Identities=24%  Similarity=0.314  Sum_probs=99.5

Q ss_pred             cCccccccccccCeEEEEEEEcCC-CcEEEEEEecCCC---cccHHHHHHHHHh------ccccceecchHH--HHHHhh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFPG-GQQIAVKRLSSAS---GQGLEEFKNEIET------SNSNATIGANVK--AFVREM  472 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~~-~~~vAvK~l~~~~---~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~  472 (626)
                      ++|.+.+.||+|+||.||+++... ++.+|+|.+.+..   ......+..|+..      ++++.+......  .++.++
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM   80 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence            468888999999999999999854 7889999986421   1223345555543      344444332221  333456


Q ss_pred             ccccCCCccc-------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhcc
Q 006915          473 KTFSDPTLSA-------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMM  541 (626)
Q Consensus       473 ~~~~~~~l~~-------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~  541 (626)
                      +++.++++..       .+++.....++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++..+.
T Consensus        81 ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~---iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~  153 (332)
T cd05623          81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFGSCLKLM  153 (332)
T ss_pred             eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEeecchheecc
Confidence            6666665533       3567778889999999999999988   9999999999999999999999999986543

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.72  E-value=4.8e-18  Score=175.94  Aligned_cols=177  Identities=23%  Similarity=0.198  Sum_probs=114.5

Q ss_pred             ccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHH-------HHhccccceecchHH--HHHHhhccccC
Q 006915          411 NKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNE-------IETSNSNATIGANVK--AFVREMKTFSD  477 (626)
Q Consensus       411 ~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e-------~~~~~~~~~~~~~~~--~~~~~~~~~~~  477 (626)
                      +.||+|+||.||+|+.. +++.||||.+....   .....++..|       +.+++++.+.+....  .++.+++++.+
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG   80 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            36999999999999885 58899999987432   1122233333       234667766543322  23345566666


Q ss_pred             CCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhccccccCCCCCh
Q 006915          478 PTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSKP  551 (626)
Q Consensus       478 ~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~  551 (626)
                      +++.      ..+.......++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++............. 
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~-  156 (321)
T cd05603          81 GELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTF-  156 (321)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccccc-
Confidence            5553      23567777889999999999999987   9999999999999999999999999986543221111000 


Q ss_pred             HHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccccCCCCCCCc
Q 006915          552 NEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPA  596 (626)
Q Consensus       552 ~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~P~  596 (626)
                           +....+.+.+.--....+...+++.|+.+++++.++..|.
T Consensus       157 -----~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf  196 (321)
T cd05603         157 -----CGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPF  196 (321)
T ss_pred             -----cCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCC
Confidence                 0000111111111223455567777777777777777664

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.72  E-value=3e-18  Score=177.93  Aligned_cols=178  Identities=19%  Similarity=0.200  Sum_probs=119.9

Q ss_pred             ccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHHHHh-------ccccceecchHH--HHHHhhccccC
Q 006915          411 NKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNEIET-------SNSNATIGANVK--AFVREMKTFSD  477 (626)
Q Consensus       411 ~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e~~~-------~~~~~~~~~~~~--~~~~~~~~~~~  477 (626)
                      +.||+|+||.||+++.. +++.||||+++...   ......+..|+..       ++++.+.+....  .++.+++++.+
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG   80 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence            46999999999999874 57899999998532   2233445555443       445555443221  33455666666


Q ss_pred             CCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhccccccCCCCCh
Q 006915          478 PTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSKP  551 (626)
Q Consensus       478 ~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~  551 (626)
                      +++.      ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||++............. 
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~-  156 (327)
T cd05617          81 GDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERG---IIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTF-  156 (327)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceecc-
Confidence            6653      35788999999999999999999998   9999999999999999999999999986433211100000 


Q ss_pred             HHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccccCCCCCCCce
Q 006915          552 NEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAF  597 (626)
Q Consensus       552 ~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~P~~  597 (626)
                           +....+...+.--..+.+...++++|+.+++++.++..|..
T Consensus       157 -----~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~  197 (327)
T cd05617         157 -----CGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFD  197 (327)
T ss_pred             -----cCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCC
Confidence                 00001111111123455667788888888788888777753

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.72  E-value=1.5e-17  Score=170.16  Aligned_cols=132  Identities=26%  Similarity=0.437  Sum_probs=94.6

Q ss_pred             hcCccccccccccCeEEEEEEEcCC-CcEEEEEEecCCCc-ccHHHHHHHHH-------hccccceecchHH--HHHHhh
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFPG-GQQIAVKRLSSASG-QGLEEFKNEIE-------TSNSNATIGANVK--AFVREM  472 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~~-~~~vAvK~l~~~~~-~~~~~~~~e~~-------~~~~~~~~~~~~~--~~~~~~  472 (626)
                      .++|++.+.||+|+||.||+|.... ++.||||.++.... ....++..|+.       +++++.+.+.+..  .++..+
T Consensus        14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~   93 (296)
T cd06618          14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM   93 (296)
T ss_pred             cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence            3567788999999999999999865 89999999975322 23344444543       3455555544322  111122


Q ss_pred             ccccCC------CcccCCCHHHHHHHHHHHHHHHHHHHhC-CCCceEecCCCCCCeEECCCCcEEEEecCcch
Q 006915          473 KTFSDP------TLSALLHWEMRFNIIIGIARGLLYLHQD-SRLRIIHRDLKTSNILLDQEMNPKISDFGLAL  538 (626)
Q Consensus       473 ~~~~~~------~l~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~  538 (626)
                      ++....      .....+++..+..++.||+.||+|||+. +   |+||||+|+||++++++.+||+|||++.
T Consensus        94 e~~~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~---i~H~dl~p~nill~~~~~~kL~dfg~~~  163 (296)
T cd06618          94 ELMSTCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHG---VIHRDVKPSNILLDASGNVKLCDFGISG  163 (296)
T ss_pred             eccCcCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCC---EecCCCcHHHEEEcCCCCEEECccccch
Confidence            222110      0123578888999999999999999974 5   9999999999999999999999999874

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.72  E-value=1.9e-17  Score=166.02  Aligned_cols=129  Identities=33%  Similarity=0.487  Sum_probs=98.1

Q ss_pred             CccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCcc--cHHHHHHHHHh------ccccceecchHH--HHHHhhcc
Q 006915          406 NFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQ--GLEEFKNEIET------SNSNATIGANVK--AFVREMKT  474 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~--~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~  474 (626)
                      +|...+.||+|+||.||+|... +++.||||.++.....  ....+.+|++.      ++++.+.+....  .+...+++
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY   80 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence            4677789999999999999874 6889999999754432  45566677654      555555543322  22233444


Q ss_pred             ccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          475 FSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       475 ~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ..++++.+      .+.+..+..++.+++.||.|||+.+   |+|+||+|+||++++++.+||+|||++
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~kl~d~g~~  146 (264)
T cd06626          81 CSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHG---IVHRDIKPANIFLDHNGVIKLGDFGCA  146 (264)
T ss_pred             CCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEcccccc
Confidence            44444432      3678888899999999999999998   999999999999999999999999987

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.72  E-value=1.3e-17  Score=185.74  Aligned_cols=182  Identities=26%  Similarity=0.351  Sum_probs=132.3

Q ss_pred             HhhcCccccccccccCeEEEEEEEcC----C----CcEEEEEEecCCC-cccHHHHHHHHHh-------ccccceecchH
Q 006915          402 AATDNFSEANKLGKGGFGPVYKAKFP----G----GQQIAVKRLSSAS-GQGLEEFKNEIET-------SNSNATIGANV  465 (626)
Q Consensus       402 ~~~~~f~~~~~lG~G~fG~Vy~~~~~----~----~~~vAvK~l~~~~-~~~~~~~~~e~~~-------~~~~~~~~~~~  465 (626)
                      ...++..+.+.||+|.||.|++|...    .    ...||||.++... ....+.+..|++.       +|++.++|+|.
T Consensus       293 ~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t  372 (609)
T KOG0200|consen  293 IPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACT  372 (609)
T ss_pred             echhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeec
Confidence            33445555679999999999999753    1    4579999998543 3455677777664       78888888766


Q ss_pred             H--HHHHhhccccCCCcc----------------------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCe
Q 006915          466 K--AFVREMKTFSDPTLS----------------------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNI  521 (626)
Q Consensus       466 ~--~~~~~~~~~~~~~l~----------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NI  521 (626)
                      .  .++.+.++...+++.                      ..|.....+.++.|||.||+||++..   +|||||.++||
T Consensus       373 ~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~---~vHRDLAaRNV  449 (609)
T KOG0200|consen  373 QDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVP---CVHRDLAARNV  449 (609)
T ss_pred             cCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCC---ccchhhhhhhE
Confidence            5  222223333322221                      23778888999999999999999986   99999999999


Q ss_pred             EECCCCcEEEEecCcchhccccc---------------------------------------------------------
Q 006915          522 LLDQEMNPKISDFGLALDMMDQK---------------------------------------------------------  544 (626)
Q Consensus       522 Ll~~~~~~kl~DFGla~~~~~~~---------------------------------------------------------  544 (626)
                      |+.++..+||+|||+|++..+..                                                         
T Consensus       450 Li~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~  529 (609)
T KOG0200|consen  450 LITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTE  529 (609)
T ss_pred             EecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHH
Confidence            99999999999999994221100                                                         


Q ss_pred             ---------cCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 006915          545 ---------LHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEA  586 (626)
Q Consensus       545 ---------~~~~~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~  586 (626)
                               .....+..+..++..++..||+.+|++||++.+++..|+..+
T Consensus       530 ~l~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l  580 (609)
T KOG0200|consen  530 ELLEFLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHL  580 (609)
T ss_pred             HHHHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHH
Confidence                     001111222346778999999999999999999999998853

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.72  E-value=2.3e-17  Score=170.43  Aligned_cols=130  Identities=27%  Similarity=0.306  Sum_probs=97.9

Q ss_pred             cCccccccccccCeEEEEEEEcCC-CcEEEEEEecCCCcc---cHHHHHHHHHh------ccccceecchHH--HHHHhh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFPG-GQQIAVKRLSSASGQ---GLEEFKNEIET------SNSNATIGANVK--AFVREM  472 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~~-~~~vAvK~l~~~~~~---~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~  472 (626)
                      ++|+..+.||+|+||.||++...+ ++.||||.+......   ....+..|++.      ++++.+.+....  .++..+
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   80 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM   80 (316)
T ss_pred             CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence            368888999999999999998864 899999999754322   34456666554      455555443222  122334


Q ss_pred             ccccCCCcc--------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          473 KTFSDPTLS--------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       473 ~~~~~~~l~--------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++..++++.        ..+++..+..++.|++.||+|||+.+   ++|+||||+||+++.++.++|+|||++
T Consensus        81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~  150 (316)
T cd05574          81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLG---IVYRDLKPENILLHESGHIMLSDFDLS  150 (316)
T ss_pred             EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChHHeEEcCCCCEEEeecchh
Confidence            444444432        34678888899999999999999988   999999999999999999999999986

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.72  E-value=1.9e-17  Score=168.66  Aligned_cols=130  Identities=29%  Similarity=0.445  Sum_probs=93.5

Q ss_pred             CccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC-cccHHHHHHHHH-------hccccceecchHHH--HHHhhcc
Q 006915          406 NFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS-GQGLEEFKNEIE-------TSNSNATIGANVKA--FVREMKT  474 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~e~~-------~~~~~~~~~~~~~~--~~~~~~~  474 (626)
                      +|...+.||+|+||.||+++.. +++.||||.+.... ......+.+|+.       +++++++.+.....  ....+++
T Consensus         5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~   84 (288)
T cd06616           5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL   84 (288)
T ss_pred             HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence            4555679999999999999875 58999999987532 233455666653       35666666543220  1111111


Q ss_pred             ccC----------CCcccCCCHHHHHHHHHHHHHHHHHHHhC-CCCceEecCCCCCCeEECCCCcEEEEecCcch
Q 006915          475 FSD----------PTLSALLHWEMRFNIIIGIARGLLYLHQD-SRLRIIHRDLKTSNILLDQEMNPKISDFGLAL  538 (626)
Q Consensus       475 ~~~----------~~l~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~  538 (626)
                      ...          ......+++.....++.+++.||+|||+. +   |+||||||+|||++.++.+||+|||++.
T Consensus        85 ~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~  156 (288)
T cd06616          85 MDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELK---IIHRDVKPSNILLDRNGNIKLCDFGISG  156 (288)
T ss_pred             ccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCC---eeccCCCHHHEEEccCCcEEEeecchhH
Confidence            110          01123477888899999999999999975 5   9999999999999999999999999873

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.71  E-value=6.8e-19  Score=176.17  Aligned_cols=186  Identities=25%  Similarity=0.272  Sum_probs=137.0

Q ss_pred             hhcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHHHHh------ccccceecchH---HHHH
Q 006915          403 ATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNEIET------SNSNATIGANV---KAFV  469 (626)
Q Consensus       403 ~~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e~~~------~~~~~~~~~~~---~~~~  469 (626)
                      ..+.|..-+.||+||||+||-++.+ +|+.+|.|++.+..   .++...-++|-.+      +-+|.+. +..   ..+.
T Consensus       183 t~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVsla-YAfeTkd~LC  261 (591)
T KOG0986|consen  183 TKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLA-YAFETKDALC  261 (591)
T ss_pred             cccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEe-eeecCCCceE
Confidence            3456888899999999999999885 59999999986432   1222222333222      2222221 111   1334


Q ss_pred             HhhccccCCCccc--------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhcc
Q 006915          470 REMKTFSDPTLSA--------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMM  541 (626)
Q Consensus       470 ~~~~~~~~~~l~~--------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~  541 (626)
                      .++..+.++++.-        -++....+-++.+|+.||++||...   ||.|||||+|||||++|+++|+|+|||.++.
T Consensus       262 lVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~---iVYRDLKPeNILLDd~GhvRISDLGLAvei~  338 (591)
T KOG0986|consen  262 LVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRR---IVYRDLKPENILLDDHGHVRISDLGLAVEIP  338 (591)
T ss_pred             EEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcc---eeeccCChhheeeccCCCeEeeccceEEecC
Confidence            4455555555533        3567888889999999999999987   9999999999999999999999999998887


Q ss_pred             ccccCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccccCCCCCCCceee
Q 006915          542 DQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAFVI  599 (626)
Q Consensus       542 ~~~~~~~~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~P~~~~  599 (626)
                      +......       ++..++++..+.--.++.+.+-+.+.|+-.++++..++.|....
T Consensus       339 ~g~~~~~-------rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~  389 (591)
T KOG0986|consen  339 EGKPIRG-------RVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQR  389 (591)
T ss_pred             CCCcccc-------ccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhh
Confidence            7655433       24455666666677888999999999999999999999996543

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.71  E-value=2.4e-17  Score=173.02  Aligned_cols=131  Identities=28%  Similarity=0.354  Sum_probs=97.5

Q ss_pred             hhcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCC--CcccHHHHHHHHHh------ccccceecchHH-------
Q 006915          403 ATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSA--SGQGLEEFKNEIET------SNSNATIGANVK-------  466 (626)
Q Consensus       403 ~~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~--~~~~~~~~~~e~~~------~~~~~~~~~~~~-------  466 (626)
                      ..++|+..+.||+|+||.||+|+.. +++.||||.+...  ......++.+|+..      ++++++++....       
T Consensus        14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   93 (353)
T cd07850          14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF   93 (353)
T ss_pred             hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence            3467999999999999999999874 6899999998642  22233445555543      666666543221       


Q ss_pred             -HHHHhhccccCCCcc----cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          467 -AFVREMKTFSDPTLS----ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       467 -~~~~~~~~~~~~~l~----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                       .++..++++. +++.    ..++......++.|++.||+|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus        94 ~~~~lv~e~~~-~~l~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nil~~~~~~~kL~Dfg~~  165 (353)
T cd07850          94 QDVYLVMELMD-ANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA  165 (353)
T ss_pred             CcEEEEEeccC-CCHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCccc
Confidence             1123334332 2222    22677888889999999999999998   999999999999999999999999988

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.71  E-value=3.1e-17  Score=170.35  Aligned_cols=124  Identities=18%  Similarity=0.269  Sum_probs=92.8

Q ss_pred             ccccccc--CeEEEEEEEc-CCCcEEEEEEecCCC--cccHHHHHHHH------HhccccceecchHH--HHHHhhcccc
Q 006915          410 ANKLGKG--GFGPVYKAKF-PGGQQIAVKRLSSAS--GQGLEEFKNEI------ETSNSNATIGANVK--AFVREMKTFS  476 (626)
Q Consensus       410 ~~~lG~G--~fG~Vy~~~~-~~~~~vAvK~l~~~~--~~~~~~~~~e~------~~~~~~~~~~~~~~--~~~~~~~~~~  476 (626)
                      .++||+|  +||+||+++. .+++.||||+++...  ......+.+|+      .++|++++.+.+..  .++.+++++.
T Consensus         3 ~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~   82 (327)
T cd08227           3 LTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA   82 (327)
T ss_pred             hhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccC
Confidence            4789999  7899999987 468999999997532  22233444454      45777777654432  2233445554


Q ss_pred             CCCcc--------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCc
Q 006915          477 DPTLS--------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGL  536 (626)
Q Consensus       477 ~~~l~--------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl  536 (626)
                      .+++.        ..+++..+..++.|++.||.|||+.+   |+||||||+|||++.++.++++||+.
T Consensus        83 ~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiH~dlkp~Nil~~~~~~~~l~~~~~  147 (327)
T cd08227          83 YGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRS  147 (327)
T ss_pred             CCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCChhhEEEecCCcEEEcccch
Confidence            44432        23678888999999999999999998   99999999999999999999999974

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.71  E-value=2.7e-17  Score=164.19  Aligned_cols=129  Identities=28%  Similarity=0.401  Sum_probs=94.3

Q ss_pred             CccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC--cccHHHHHHHHHh------ccccceecchHH--HHHHhhcc
Q 006915          406 NFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS--GQGLEEFKNEIET------SNSNATIGANVK--AFVREMKT  474 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~  474 (626)
                      +|+..+.||+|+||.||++... +++.+|||.+....  ......+.+|++.      ++++...+....  .++..+++
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY   80 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence            4778899999999999999874 58899999987532  2334566666554      444444432211  12233444


Q ss_pred             ccCCCcc--------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCC-CcEEEEecCcc
Q 006915          475 FSDPTLS--------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQE-MNPKISDFGLA  537 (626)
Q Consensus       475 ~~~~~l~--------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~-~~~kl~DFGla  537 (626)
                      +.++++.        ..+++..+..++.+++.||.|||+.+   |+|+||||+||+++++ ..+||+|||++
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~~l~d~~~~  149 (256)
T cd08220          81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKL---ILHRDLKTQNILLDKHKMVVKIGDFGIS  149 (256)
T ss_pred             CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEccCCCc
Confidence            4444432        23678888999999999999999987   9999999999999855 46899999987

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.71  E-value=2.1e-17  Score=168.54  Aligned_cols=129  Identities=26%  Similarity=0.403  Sum_probs=96.3

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCc-ccHHHHHHHH------HhccccceecchHH--HHHHhhcc
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASG-QGLEEFKNEI------ETSNSNATIGANVK--AFVREMKT  474 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~-~~~~~~~~e~------~~~~~~~~~~~~~~--~~~~~~~~  474 (626)
                      ++|+..+.||+|+||.||+|+.. +++.||||.+..... .....+.+|+      .+++++.+.+....  ..+.++++
T Consensus         5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (291)
T cd07844           5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY   84 (291)
T ss_pred             cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence            57888899999999999999875 588999999874322 1222344444      44666666654332  12233344


Q ss_pred             ccCCCcc-------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          475 FSDPTLS-------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       475 ~~~~~l~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +.. ++.       ..+++.....++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus        85 ~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~  150 (291)
T cd07844          85 LDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRR---VLHRDLKPQNLLISERGELKLADFGLA  150 (291)
T ss_pred             CCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCHHHEEEcCCCCEEECccccc
Confidence            332 322       24678888899999999999999998   999999999999999999999999986

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.71  E-value=2.1e-17  Score=169.91  Aligned_cols=130  Identities=22%  Similarity=0.351  Sum_probs=99.1

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHHHHh------ccccceecchHH--HHHHhh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNEIET------SNSNATIGANVK--AFVREM  472 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~  472 (626)
                      ++|+..+.||+|+||.||++... .++.||||.+....   ......+.+|++.      ++++.+.+....  .++..+
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM   80 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence            46888899999999999999885 47899999987543   1233455566543      556665543322  223445


Q ss_pred             ccccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          473 KTFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       473 ~~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++..++++..      .+++.....++.|++.||.|||+.+   ++||||||+||+++.++.+||+|||++
T Consensus        81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~NIll~~~~~~~l~dfg~~  148 (305)
T cd05609          81 EYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYG---IVHRDLKPDNLLITSMGHIKLTDFGLS  148 (305)
T ss_pred             ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHEEECCCCCEEEeeCCCc
Confidence            5555555432      3678888899999999999999987   999999999999999999999999976

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.71  E-value=2.5e-17  Score=169.96  Aligned_cols=129  Identities=26%  Similarity=0.373  Sum_probs=95.4

Q ss_pred             CccccccccccCeEEEEEEEcC---CCcEEEEEEecCCC---cccHHHHHHH------HHhccccceecchHHH----HH
Q 006915          406 NFSEANKLGKGGFGPVYKAKFP---GGQQIAVKRLSSAS---GQGLEEFKNE------IETSNSNATIGANVKA----FV  469 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~---~~~~vAvK~l~~~~---~~~~~~~~~e------~~~~~~~~~~~~~~~~----~~  469 (626)
                      +|.+.+.||+|+||.||+|...   +++.||||.+....   ......+.+|      +.+++++.+.+.+...    ++
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   80 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY   80 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence            4677889999999999999874   47899999998632   2222334444      4457777777654432    22


Q ss_pred             HhhccccCCCc-----------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECC----CCcEEEEec
Q 006915          470 REMKTFSDPTL-----------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQ----EMNPKISDF  534 (626)
Q Consensus       470 ~~~~~~~~~~l-----------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~----~~~~kl~DF  534 (626)
                      .++++... ++           ...++......++.||+.||.|||+.+   |+||||||+|||++.    ++.+||+||
T Consensus        81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~h~dlkp~Nil~~~~~~~~~~~kl~Df  156 (316)
T cd07842          81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW---VLHRDLKPANILVMGEGPERGVVKIGDL  156 (316)
T ss_pred             EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEEcCCCCccceEEECCC
Confidence            23333321 11           124677888899999999999999998   999999999999999    999999999


Q ss_pred             Ccch
Q 006915          535 GLAL  538 (626)
Q Consensus       535 Gla~  538 (626)
                      |++.
T Consensus       157 g~~~  160 (316)
T cd07842         157 GLAR  160 (316)
T ss_pred             cccc
Confidence            9873

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.71  E-value=2.3e-17  Score=171.97  Aligned_cols=130  Identities=28%  Similarity=0.428  Sum_probs=95.8

Q ss_pred             hcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCC-cccHHHHHHHHH------hccccceecchHHH-------H
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSAS-GQGLEEFKNEIE------TSNSNATIGANVKA-------F  468 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~-~~~~~~~~~e~~------~~~~~~~~~~~~~~-------~  468 (626)
                      +++|++.+.||+|+||.||+|+. .+++.||||.+.... ......+.+|+.      +++++.+.+.....       .
T Consensus         4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   83 (336)
T cd07849           4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV   83 (336)
T ss_pred             ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence            46899999999999999999987 468999999987432 223344555544      45666555432110       1


Q ss_pred             HHhhccccCCCcc-----cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          469 VREMKTFSDPTLS-----ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       469 ~~~~~~~~~~~l~-----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +..+++.. +++.     ..+++.....++.|++.||+|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus        84 ~lv~e~~~-~~l~~~~~~~~l~~~~~~~i~~ql~~aL~~LH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~  153 (336)
T cd07849          84 YIVQELME-TDLYKLIKTQHLSNDHIQYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTNCDLKICDFGLA  153 (336)
T ss_pred             EEEehhcc-cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEECcccce
Confidence            11222222 2222     34778888999999999999999998   999999999999999999999999987

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.71  E-value=6.5e-17  Score=169.22  Aligned_cols=138  Identities=30%  Similarity=0.386  Sum_probs=101.9

Q ss_pred             HHHHHHhhcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCC--cccHHHHHHHHH------hccccceecchHHH
Q 006915          397 FESILAATDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSAS--GQGLEEFKNEIE------TSNSNATIGANVKA  467 (626)
Q Consensus       397 ~~~l~~~~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~--~~~~~~~~~e~~------~~~~~~~~~~~~~~  467 (626)
                      ..++...+++|.+.+.||+|+||.||+|.. .+++.||||++....  ....+.+.+|+.      +++++++.+.....
T Consensus         9 ~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~   88 (345)
T cd07877           9 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA   88 (345)
T ss_pred             HHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeec
Confidence            445667789999999999999999999986 468999999997532  222344555554      35666655432210


Q ss_pred             -------HHHhhccccCCCcc-----cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecC
Q 006915          468 -------FVREMKTFSDPTLS-----ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFG  535 (626)
Q Consensus       468 -------~~~~~~~~~~~~l~-----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFG  535 (626)
                             .....+.+.++++.     ..+++..+..++.||++||+|||+.+   |+||||||+||++++++.+||+|||
T Consensus        89 ~~~~~~~~~~lv~~~~~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kl~dfg  165 (345)
T cd07877          89 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFG  165 (345)
T ss_pred             ccccccccEEEEehhcccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEcCCCCEEEeccc
Confidence                   01111122233332     24788899999999999999999998   9999999999999999999999999


Q ss_pred             cc
Q 006915          536 LA  537 (626)
Q Consensus       536 la  537 (626)
                      ++
T Consensus       166 ~~  167 (345)
T cd07877         166 LA  167 (345)
T ss_pred             cc
Confidence            87

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.71  E-value=2.1e-17  Score=168.03  Aligned_cols=130  Identities=23%  Similarity=0.343  Sum_probs=97.0

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCC--CcccHHHHHHHHHh------ccccceecchHH--HHHHhhc
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSA--SGQGLEEFKNEIET------SNSNATIGANVK--AFVREMK  473 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~--~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~  473 (626)
                      ++|++.+.||+|+||.||+|... +++.||||.++..  .......+.+|++.      ++++.+++....  .++..++
T Consensus         1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e   80 (288)
T cd07833           1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE   80 (288)
T ss_pred             CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence            36888899999999999999885 5889999998743  22334556666554      555555443322  1223334


Q ss_pred             cccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          474 TFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       474 ~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++....+.      ..+++.....++.||+.||.|||+.+   ++|+||+|+||++++++.+||+|||++
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~ni~~~~~~~~kl~d~g~~  147 (288)
T cd07833          81 YVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHN---IIHRDIKPENILVSESGVLKLCDFGFA  147 (288)
T ss_pred             cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEEeeecc
Confidence            44333221      23678888999999999999999997   999999999999999999999999986

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.71  E-value=4e-17  Score=167.36  Aligned_cols=134  Identities=27%  Similarity=0.360  Sum_probs=98.7

Q ss_pred             HhhcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCc--ccHHHHHHHH------HhccccceecchHH------
Q 006915          402 AATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASG--QGLEEFKNEI------ETSNSNATIGANVK------  466 (626)
Q Consensus       402 ~~~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~--~~~~~~~~e~------~~~~~~~~~~~~~~------  466 (626)
                      ...++|++.+.||+|+||.||+|... +++.||||.++....  .....+.+|+      .+++++.+.+....      
T Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~   83 (302)
T cd07864           4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD   83 (302)
T ss_pred             hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence            34678899999999999999999985 588999999974321  2223344444      34667776654332      


Q ss_pred             ------HHHHhhccccCCC------cccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEec
Q 006915          467 ------AFVREMKTFSDPT------LSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDF  534 (626)
Q Consensus       467 ------~~~~~~~~~~~~~------l~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DF  534 (626)
                            .+...+++..+..      ....+++..+..++.||+.||+|||+.+   |+|+||||+||++++++.+||+||
T Consensus        84 ~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~kl~df  160 (302)
T cd07864          84 FKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKN---FLHRDIKCSNILLNNKGQIKLADF  160 (302)
T ss_pred             ccccCCcEEEEEcccCccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCcEEeCcc
Confidence                  1112333332210      1224788999999999999999999997   999999999999999999999999


Q ss_pred             Ccch
Q 006915          535 GLAL  538 (626)
Q Consensus       535 Gla~  538 (626)
                      |++.
T Consensus       161 g~~~  164 (302)
T cd07864         161 GLAR  164 (302)
T ss_pred             cccc
Confidence            9873

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.71  E-value=3.2e-17  Score=167.43  Aligned_cols=130  Identities=29%  Similarity=0.378  Sum_probs=96.1

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCc--ccHHHHHHHH------HhccccceecchHH----HHHHh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASG--QGLEEFKNEI------ETSNSNATIGANVK----AFVRE  471 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~--~~~~~~~~e~------~~~~~~~~~~~~~~----~~~~~  471 (626)
                      ++|+..+.||+|+||.||+|... +++.+|||.++....  .....+.+|+      .++|++.+.+....    .++..
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv   84 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV   84 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence            46888899999999999999985 588999999974321  1122333443      35777766654321    12222


Q ss_pred             hccccCCCc-------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcch
Q 006915          472 MKTFSDPTL-------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLAL  538 (626)
Q Consensus       472 ~~~~~~~~l-------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~  538 (626)
                      ++++. +++       ...+++.....++.||+.||+|||+.+   ++|+||||+|||++.++.+||+|||++.
T Consensus        85 ~e~~~-~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~~l~d~g~~~  154 (293)
T cd07843          85 MEYVE-HDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNW---ILHRDLKTSNLLLNNRGILKICDFGLAR  154 (293)
T ss_pred             ehhcC-cCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCcEEEeecCcee
Confidence            33332 122       124788999999999999999999998   9999999999999999999999999873

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.71  E-value=1.6e-17  Score=150.33  Aligned_cols=188  Identities=23%  Similarity=0.348  Sum_probs=123.0

Q ss_pred             hcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCC-CcccHHHHHHHHHh-------ccccceecchHH--------
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSA-SGQGLEEFKNEIET-------SNSNATIGANVK--------  466 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~-~~~~~~~~~~e~~~-------~~~~~~~~~~~~--------  466 (626)
                      .+.......||+|++|.|-+-++ .+|+..|||+++.. ..+..++.++|+.+       +-.+++.|.-..        
T Consensus        45 ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcM  124 (282)
T KOG0984|consen   45 ADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICM  124 (282)
T ss_pred             hhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeH
Confidence            33444557899999999998887 57999999999853 34556677788776       334555553221        


Q ss_pred             -HHHHhhccccC--CCcccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhcccc
Q 006915          467 -AFVREMKTFSD--PTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQ  543 (626)
Q Consensus       467 -~~~~~~~~~~~--~~l~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  543 (626)
                       ..-.+++.+-.  -.....+++...-+||..|..||.|||++-  .|||||+||+||||+.+|++||+|||++..+.|.
T Consensus       125 E~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dS  202 (282)
T KOG0984|consen  125 ELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFGISGYLVDS  202 (282)
T ss_pred             HHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEcccccceeehhh
Confidence             11011111100  011233556666789999999999999873  6999999999999999999999999999666554


Q ss_pred             ccCC---CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccccCCCCCCCceee
Q 006915          544 KLHA---SSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAFVI  599 (626)
Q Consensus       544 ~~~~---~~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~P~~~~  599 (626)
                      ....   ...+-...+-+.     .+.++. -.+.+.++++|+-.+.|+.+.+.|-...
T Consensus       203 iAkt~daGCkpYmaPEri~-----~e~n~~-gY~vksDvWSLGItmiElA~lr~PY~~w  255 (282)
T KOG0984|consen  203 IAKTMDAGCKPYMAPERIN-----PELNQK-GYSVKSDVWSLGITMIEMAILRFPYESW  255 (282)
T ss_pred             hHHHHhcCCCccCChhhcC-----cccCcc-cceeehhhhhhhhhhhhhhhcccccccc
Confidence            2211   100000000000     111211 4577888999999989999988886554

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.71  E-value=3.8e-17  Score=170.43  Aligned_cols=131  Identities=29%  Similarity=0.428  Sum_probs=98.2

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCC--CcccHHHHHHH------H-HhccccceecchHH----HHH
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSA--SGQGLEEFKNE------I-ETSNSNATIGANVK----AFV  469 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~--~~~~~~~~~~e------~-~~~~~~~~~~~~~~----~~~  469 (626)
                      .++|++.+.||+|+||.||+|... +++.+|||++...  .......+.+|      + .+++++++.+.+..    .++
T Consensus         6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~   85 (337)
T cd07852           6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIY   85 (337)
T ss_pred             hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEE
Confidence            467888899999999999999875 5889999998542  12222334444      3 56777777765332    122


Q ss_pred             HhhccccCCCccc-----CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcch
Q 006915          470 REMKTFSDPTLSA-----LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLAL  538 (626)
Q Consensus       470 ~~~~~~~~~~l~~-----~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~  538 (626)
                      .++++.. +++..     .+.+..+..++.||+.||+|||+.+   |+||||||+||+++.++.+||+|||++.
T Consensus        86 lv~e~~~-~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---i~H~dl~p~nill~~~~~~kl~d~g~~~  155 (337)
T cd07852          86 LVFEYME-TDLHAVIRANILEDVHKRYIMYQLLKALKYIHSGN---VIHRDLKPSNILLNSDCRVKLADFGLAR  155 (337)
T ss_pred             EEecccc-cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccchh
Confidence            3334333 23222     5678888999999999999999987   9999999999999999999999999884

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.71  E-value=3.9e-17  Score=163.76  Aligned_cols=130  Identities=28%  Similarity=0.431  Sum_probs=101.0

Q ss_pred             cCccccccccccCeEEEEEEEcCC-CcEEEEEEecCCCc-ccHHHHHHHHHh------ccccceecchHH--HHHHhhcc
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFPG-GQQIAVKRLSSASG-QGLEEFKNEIET------SNSNATIGANVK--AFVREMKT  474 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~~-~~~vAvK~l~~~~~-~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~  474 (626)
                      ++|++.+.||+|++|.||+++... ++.||||++..... .....+.+|+..      ++++.+.+....  .+...+++
T Consensus         1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06623           1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY   80 (264)
T ss_pred             CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence            367888999999999999999864 89999999986543 345567777653      566666554333  22233455


Q ss_pred             ccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHh-CCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          475 FSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQ-DSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       475 ~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +.++++.      ..++...++.++.|+++||+|||+ .+   ++|+||+|+||+++.++.++|+|||++
T Consensus        81 ~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~---~~H~~l~~~ni~~~~~~~~~l~df~~~  147 (264)
T cd06623          81 MDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRH---IIHRDIKPSNLLINSKGEVKIADFGIS  147 (264)
T ss_pred             cCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCC---CccCCCCHHHEEECCCCCEEEccCccc
Confidence            5544443      346788889999999999999999 87   999999999999999999999999987

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.70  E-value=4.3e-17  Score=162.56  Aligned_cols=129  Identities=33%  Similarity=0.470  Sum_probs=99.4

Q ss_pred             CccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCc--ccHHHHHHHHH------hccccceecchHHH----HHHhh
Q 006915          406 NFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASG--QGLEEFKNEIE------TSNSNATIGANVKA----FVREM  472 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~--~~~~~~~~e~~------~~~~~~~~~~~~~~----~~~~~  472 (626)
                      +|...+.||+|++|.||+|... +++.|++|.+.....  ...+.+.+|++      +++++...+.....    +...+
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~   80 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL   80 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence            3677789999999999999986 689999999875432  34556666655      35666655443322    22334


Q ss_pred             ccccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          473 KTFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       473 ~~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++..++++..      .+++..+..++.|++.||+|||+.+   ++|+||+|+||+++.++.+||+|||.+
T Consensus        81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---~~h~dl~p~ni~i~~~~~~~l~d~~~~  148 (260)
T cd06606          81 EYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNG---IVHRDIKGANILVDSDGVVKLADFGCA  148 (260)
T ss_pred             EecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEcccccE
Confidence            4444444432      5678899999999999999999987   999999999999999999999999977

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.70  E-value=4.8e-17  Score=161.46  Aligned_cols=129  Identities=36%  Similarity=0.536  Sum_probs=98.7

Q ss_pred             ccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH--HHHHhhccccC
Q 006915          407 FSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK--AFVREMKTFSD  477 (626)
Q Consensus       407 f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~~~~  477 (626)
                      |...+.||+|++|.||++... +++.+++|++..........+.+|++.      ++++.+.+....  .....++++.+
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~   81 (253)
T cd05122           2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSG   81 (253)
T ss_pred             ceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCC
Confidence            667789999999999999985 688999999986554455667777654      444444443222  12223344443


Q ss_pred             CCcc-------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcch
Q 006915          478 PTLS-------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLAL  538 (626)
Q Consensus       478 ~~l~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~  538 (626)
                      .++.       ..+++..+..++.|++.||.|||..+   ++|+||+|+||++++++.+||+|||++.
T Consensus        82 ~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~~~~~  146 (253)
T cd05122          82 GSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNG---IIHRDIKAANILLTSDGEVKLIDFGLSA  146 (253)
T ss_pred             CcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCC---EecCCCCHHHEEEccCCeEEEeeccccc
Confidence            4432       35788899999999999999999987   9999999999999999999999999873

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.70  E-value=3.7e-17  Score=166.29  Aligned_cols=128  Identities=27%  Similarity=0.395  Sum_probs=96.9

Q ss_pred             ccccccccccCeEEEEEEEc-CCCcEEEEEEecCCCcccHHHHHHHHH------hccccceecchHH--HHHHhhccccC
Q 006915          407 FSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQGLEEFKNEIE------TSNSNATIGANVK--AFVREMKTFSD  477 (626)
Q Consensus       407 f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~~~~~~  477 (626)
                      |...+.||+|++|.||++.. .+++.+|+|++........+.+.+|+.      +++++.+.+....  ..+..+++..+
T Consensus        21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~  100 (285)
T cd06648          21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEG  100 (285)
T ss_pred             hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCC
Confidence            34447999999999999986 468899999987544444555666654      3666666654322  22233444445


Q ss_pred             CCccc-----CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          478 PTLSA-----LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       478 ~~l~~-----~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      .++..     .+++..+..++.|++.||+|||+.+   |+||||||+||+++.++.+||+|||++
T Consensus       101 ~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~d~g~~  162 (285)
T cd06648         101 GALTDIVTHTRMNEEQIATVCLAVLKALSFLHAQG---VIHRDIKSDSILLTSDGRVKLSDFGFC  162 (285)
T ss_pred             CCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChhhEEEcCCCcEEEcccccc
Confidence            45433     3678888999999999999999998   999999999999999999999999976

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.70  E-value=5.7e-17  Score=164.49  Aligned_cols=127  Identities=27%  Similarity=0.353  Sum_probs=91.1

Q ss_pred             ccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCcc-cHHHHHHHHH-------hccccceecchHH--HHHHhhccc
Q 006915          407 FSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQ-GLEEFKNEIE-------TSNSNATIGANVK--AFVREMKTF  475 (626)
Q Consensus       407 f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~-~~~~~~~e~~-------~~~~~~~~~~~~~--~~~~~~~~~  475 (626)
                      |.+.+.||+|+||.||+|+.. +++.||||++...... ......+|+.       +++++.+.+....  ..+.++++.
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~   80 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM   80 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence            456789999999999999985 4789999998754221 1112223322       3344444333222  111233333


Q ss_pred             cCCCcc--------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          476 SDPTLS--------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       476 ~~~~l~--------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                       .+++.        ..+++..+..++.|++.+|.|||+.+   ++|+||+|+||++++++.++|+|||++
T Consensus        81 -~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~dl~~~ni~i~~~~~~~l~d~~~~  146 (283)
T cd07830          81 -EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHG---FFHRDLKPENLLVSGPEVVKIADFGLA  146 (283)
T ss_pred             -CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCCEEEeecccc
Confidence             33332        35788999999999999999999998   999999999999999999999999987

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.70  E-value=5.3e-17  Score=163.05  Aligned_cols=130  Identities=28%  Similarity=0.440  Sum_probs=97.3

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC-cccHHHHHHHHHh------ccccceecchHH--HHHHhhcc
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS-GQGLEEFKNEIET------SNSNATIGANVK--AFVREMKT  474 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~  474 (626)
                      ++|++.+.||.|+||.||+|... ++..+|+|++.... ......+.+|++.      ++++...+....  .++..+++
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~   80 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY   80 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence            46888899999999999999864 58899999987432 2345566666653      555555443221  12223344


Q ss_pred             ccCCCcc---------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          475 FSDPTLS---------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       475 ~~~~~l~---------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ..++++.         ..+++.....++.|++.||+|||+.+   |+|+||||+||++++++.+||+|||++
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~---i~h~~l~p~ni~~~~~~~~~l~df~~~  149 (267)
T cd06610          81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNG---QIHRDIKAGNILLGEDGSVKIADFGVS  149 (267)
T ss_pred             cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEcccchH
Confidence            4333322         34678888899999999999999988   999999999999999999999999987

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.70  E-value=8.4e-17  Score=163.13  Aligned_cols=126  Identities=24%  Similarity=0.290  Sum_probs=92.5

Q ss_pred             ccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCc-ccHHHHHHHHH-------hccccceecchHH----HHHHhhc
Q 006915          407 FSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASG-QGLEEFKNEIE-------TSNSNATIGANVK----AFVREMK  473 (626)
Q Consensus       407 f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~-~~~~~~~~e~~-------~~~~~~~~~~~~~----~~~~~~~  473 (626)
                      |++.+.||+|+||.||+|... +++.||||+++.... ........|+.       ++|++.+.+.+..    .+...++
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e   80 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE   80 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence            456789999999999999874 588999999875321 11122223332       4666666654332    1223334


Q ss_pred             cccCCCc-------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          474 TFSDPTL-------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       474 ~~~~~~l-------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++.. ++       ...+++..+..++.|++.||+|||+.+   ++||||||+||+++. +.+||+|||++
T Consensus        81 ~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~p~ni~l~~-~~~kl~dfg~~  146 (282)
T cd07831          81 LMDM-NLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNG---IFHRDIKPENILIKD-DILKLADFGSC  146 (282)
T ss_pred             cCCc-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEcC-CCeEEEecccc
Confidence            3332 21       235789999999999999999999998   999999999999999 99999999988

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.70  E-value=4.3e-17  Score=170.01  Aligned_cols=130  Identities=28%  Similarity=0.434  Sum_probs=95.8

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCC--CcccHHHHHHHHH------hccccceecchHHH-------
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSA--SGQGLEEFKNEIE------TSNSNATIGANVKA-------  467 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~--~~~~~~~~~~e~~------~~~~~~~~~~~~~~-------  467 (626)
                      .++|.+.+.||+|+||.||+|+.. +++.||||.+...  .......+.+|+.      +++++++.+.....       
T Consensus         4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~   83 (337)
T cd07858           4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND   83 (337)
T ss_pred             ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence            457888999999999999999874 5899999998743  2222334444543      36666555432211       


Q ss_pred             HHHhhccccCCCc------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          468 FVREMKTFSDPTL------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       468 ~~~~~~~~~~~~l------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++..++++. +++      ...+++.....++.|++.||.|||+.+   ++||||||+||+++.++.+||+|||++
T Consensus        84 ~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~  155 (337)
T cd07858          84 VYIVYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSAN---VLHRDLKPSNLLLNANCDLKICDFGLA  155 (337)
T ss_pred             EEEEEeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECcCccc
Confidence            122233332 222      234778889999999999999999987   999999999999999999999999987

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.70  E-value=3.8e-17  Score=165.69  Aligned_cols=123  Identities=29%  Similarity=0.315  Sum_probs=90.2

Q ss_pred             cccccCeEEEEEEEcC-CCcEEEEEEecCCCc---ccHHHHHHHHHh---------ccccceecchHH--HHHHhhcccc
Q 006915          412 KLGKGGFGPVYKAKFP-GGQQIAVKRLSSASG---QGLEEFKNEIET---------SNSNATIGANVK--AFVREMKTFS  476 (626)
Q Consensus       412 ~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~e~~~---------~~~~~~~~~~~~--~~~~~~~~~~  476 (626)
                      .||+|+||.||++... +++.+|||.+.....   .....+.+|...         ++++.+......  .++..++++.
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   80 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN   80 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence            4899999999999874 588999999865321   112223333221         334333332221  2334566666


Q ss_pred             CCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          477 DPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       477 ~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++++.      ..+++.....++.|++.||+|||+.+   |+||||||+|||+++++.+||+|||++
T Consensus        81 ~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dikp~Nil~~~~~~~~l~dfg~~  144 (279)
T cd05633          81 GGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA  144 (279)
T ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---cCCCCCCHHHEEECCCCCEEEccCCcc
Confidence            66653      34788999999999999999999998   999999999999999999999999987

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.70  E-value=1.6e-17  Score=173.16  Aligned_cols=132  Identities=27%  Similarity=0.372  Sum_probs=106.2

Q ss_pred             hhcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCc--ccHHHHHHHHH------hccccceecchHH--HHHHh
Q 006915          403 ATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASG--QGLEEFKNEIE------TSNSNATIGANVK--AFVRE  471 (626)
Q Consensus       403 ~~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~--~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~  471 (626)
                      ....|.+...||+|.|+.|.+|++. .+..||||.+.+...  ..+..+.+|++      |+|+++++.+...  .++.+
T Consensus        54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV  133 (596)
T KOG0586|consen   54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLV  133 (596)
T ss_pred             cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEE
Confidence            4567899999999999999999985 589999999986432  33345666655      4888888776543  55566


Q ss_pred             hccccCCCcccCC------CHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          472 MKTFSDPTLSALL------HWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       472 ~~~~~~~~l~~~l------~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +++..++.+..+|      .......+..|+.++++|||+++   |||||||++||||+.+.++||+|||++
T Consensus       134 ~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~---ivHrdLk~eNilL~~~mnikIaDfgfS  202 (596)
T KOG0586|consen  134 MEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKN---IVHRDLKAENILLDENMNIKIADFGFS  202 (596)
T ss_pred             EEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcc---eeccccchhhcccccccceeeeccccc
Confidence            7777776665543      34566678999999999999998   999999999999999999999999998

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.70  E-value=5.7e-17  Score=161.67  Aligned_cols=129  Identities=25%  Similarity=0.383  Sum_probs=96.5

Q ss_pred             CccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCc--ccHHHHHHHHHh------ccccceecchHH--HHHHhhcc
Q 006915          406 NFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASG--QGLEEFKNEIET------SNSNATIGANVK--AFVREMKT  474 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~--~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~  474 (626)
                      +|...+.||+|+||.||++... +++.||+|++.....  ....++.+|++.      ++++...+....  .++..+++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~   80 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY   80 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence            4777899999999999999985 588999999975432  344556666543      555554432221  11123333


Q ss_pred             ccCCCc----------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          475 FSDPTL----------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       475 ~~~~~l----------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ..+.++          ...+++..+..++.+++.||.|||+.+   ++|+||+|+||++++++.+||+|||++
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~---~~H~dl~~~nil~~~~~~~~l~d~~~~  150 (258)
T cd08215          81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK---ILHRDIKPQNIFLTSNGLVKLGDFGIS  150 (258)
T ss_pred             cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHHeEEcCCCcEEECCccce
Confidence            333333          245778899999999999999999997   999999999999999999999999987

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.70  E-value=5.2e-17  Score=161.74  Aligned_cols=130  Identities=28%  Similarity=0.455  Sum_probs=97.5

Q ss_pred             CccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCc--ccHHHHHHHHHh------ccccceecchHH--HHHHhhcc
Q 006915          406 NFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASG--QGLEEFKNEIET------SNSNATIGANVK--AFVREMKT  474 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~--~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~  474 (626)
                      +|++.+.||+|++|.||+++.. +++.||||.+.....  .....+.+|++.      ++++.+.+....  .++..+++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY   80 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence            4677789999999999999875 578999999986543  344566666554      455554433221  11223333


Q ss_pred             ccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcch
Q 006915          475 FSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLAL  538 (626)
Q Consensus       475 ~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~  538 (626)
                      ..+.++.      ..+++..+..++.|++.||.|||+.+   |+|+||||+||+++.++.+||+|||++.
T Consensus        81 ~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~  147 (254)
T cd06627          81 AENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQG---VIHRDIKAANILTTKDGVVKLADFGVAT  147 (254)
T ss_pred             CCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEECCCCCEEEeccccce
Confidence            4343433      34788899999999999999999987   9999999999999999999999999873

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.70  E-value=4.4e-17  Score=167.61  Aligned_cols=131  Identities=26%  Similarity=0.400  Sum_probs=96.3

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC--cccHHHHHHH------HHhccccceecchHHH-------
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS--GQGLEEFKNE------IETSNSNATIGANVKA-------  467 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~e------~~~~~~~~~~~~~~~~-------  467 (626)
                      .++|+..+.||+|+||.||+|+.. +++.||||.+....  ......+.+|      +.+++++++.+.+...       
T Consensus        11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   90 (310)
T cd07865          11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY   90 (310)
T ss_pred             hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence            457889999999999999999875 58999999986432  1112223333      4457777776543221       


Q ss_pred             ---HHHhhccccCCCcc-------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          468 ---FVREMKTFSDPTLS-------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       468 ---~~~~~~~~~~~~l~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                         ++.++++... ++.       ..+++.....++.||+.||+|||+.+   ++|+||||+|||++.++.+||+|||++
T Consensus        91 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~  166 (310)
T cd07865          91 KGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNK---ILHRDMKAANILITKDGILKLADFGLA  166 (310)
T ss_pred             CceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEECCCCcEEECcCCCc
Confidence               1222333321 221       24788899999999999999999997   999999999999999999999999987


Q ss_pred             h
Q 006915          538 L  538 (626)
Q Consensus       538 ~  538 (626)
                      .
T Consensus       167 ~  167 (310)
T cd07865         167 R  167 (310)
T ss_pred             c
Confidence            3

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.70  E-value=4.6e-17  Score=169.43  Aligned_cols=131  Identities=27%  Similarity=0.381  Sum_probs=99.2

Q ss_pred             hcCccccccccccCeEEEEEEEcCC-CcEEEEEEecCCCc---ccHHHHHHHHHh-------ccccceecchHH--HHHH
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFPG-GQQIAVKRLSSASG---QGLEEFKNEIET-------SNSNATIGANVK--AFVR  470 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~~-~~~vAvK~l~~~~~---~~~~~~~~e~~~-------~~~~~~~~~~~~--~~~~  470 (626)
                      ...|++.+.||+|.||.||+++.+. |+.+|+|.+.+...   ...+.+.+|+.+       +|++.+.+....  .++.
T Consensus        34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l  113 (382)
T KOG0032|consen   34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL  113 (382)
T ss_pred             cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence            4568888999999999999999865 99999999986433   233566666654       566666543322  2334


Q ss_pred             hhccccCCCccc-----CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCC----CcEEEEecCcc
Q 006915          471 EMKTFSDPTLSA-----LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQE----MNPKISDFGLA  537 (626)
Q Consensus       471 ~~~~~~~~~l~~-----~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~----~~~kl~DFGla  537 (626)
                      +|+...++.+.+     .++......++.||+.++.|||+.+   |+||||||+|+|+...    +.+|++|||+|
T Consensus       114 vmEL~~GGeLfd~i~~~~~sE~da~~~~~~il~av~~lH~~g---vvHrDlKpEN~L~~~~~~~~~~ik~~DFGla  186 (382)
T KOG0032|consen  114 VMELCEGGELFDRIVKKHYSERDAAGIIRQILEAVKYLHSLG---VVHRDLKPENLLLASKDEGSGRIKLIDFGLA  186 (382)
T ss_pred             EEEecCCchHHHHHHHccCCHHHHHHHHHHHHHHHHHHHhCC---ceeccCCHHHeeeccccCCCCcEEEeeCCCc
Confidence            455555554322     2778888999999999999999988   9999999999999543    57999999999

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.70  E-value=5.5e-17  Score=167.06  Aligned_cols=130  Identities=30%  Similarity=0.446  Sum_probs=96.8

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCcc--cHH------HHHHHHHhccccceecchHH----HHHH
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQ--GLE------EFKNEIETSNSNATIGANVK----AFVR  470 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~--~~~------~~~~e~~~~~~~~~~~~~~~----~~~~  470 (626)
                      .++|++.+.||+|+||.||+|... +++.||+|.++.....  ...      +..+.+.+++++++.+....    .++.
T Consensus         6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (309)
T cd07845           6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL   85 (309)
T ss_pred             ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence            467889999999999999999884 5899999998743211  111      23334445777766654321    1223


Q ss_pred             hhccccCCCc-------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          471 EMKTFSDPTL-------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       471 ~~~~~~~~~l-------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++++... ++       ...+++..+..++.||+.||+|||+.+   ++||||||+||++++++.+||+|||++
T Consensus        86 v~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~kL~dfg~~  155 (309)
T cd07845          86 VMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENF---IIHRDLKVSNLLLTDKGCLKIADFGLA  155 (309)
T ss_pred             EEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECcccee
Confidence            3333322 11       234788999999999999999999998   999999999999999999999999987

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.70  E-value=9.4e-17  Score=160.17  Aligned_cols=129  Identities=36%  Similarity=0.446  Sum_probs=94.0

Q ss_pred             CccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC--cccHHHHHHHHHh------ccccceecchHH--HHHHhhcc
Q 006915          406 NFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS--GQGLEEFKNEIET------SNSNATIGANVK--AFVREMKT  474 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~  474 (626)
                      +|++.+.||+|+||.||+++.. +++.+|||.+....  .....++.+|++.      ++++.+.+....  .++..+++
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY   80 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence            4777899999999999999764 68899999987532  2233455556543      444443322221  11122333


Q ss_pred             ccCCCcc----------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          475 FSDPTLS----------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       475 ~~~~~l~----------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ..+.++.          ..+++.....++.|++.||+|||+.+   ++|+||+|.||++++++.+||+|||++
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~---i~h~~l~~~ni~~~~~~~~kl~d~g~~  150 (256)
T cd08530          81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK---ILHRDLKSANILLVANDLVKIGDLGIS  150 (256)
T ss_pred             cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEEecCCcEEEeeccch
Confidence            4344332          34678888999999999999999998   999999999999999999999999977

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.70  E-value=3.1e-17  Score=163.86  Aligned_cols=129  Identities=26%  Similarity=0.405  Sum_probs=94.2

Q ss_pred             CccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC--cccHHHHHHHHHh------ccccceecchHH--HHHHhhcc
Q 006915          406 NFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS--GQGLEEFKNEIET------SNSNATIGANVK--AFVREMKT  474 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~  474 (626)
                      +|...+.||+|+||.||+|... ++..||+|.+....  ....+.+.+|++.      ++++.+.+.+..  .++..+++
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~   80 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY   80 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence            4777899999999999999885 48899999986431  2234456666553      455554443222  11223344


Q ss_pred             ccCCCcc--------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCC-cEEEEecCcc
Q 006915          475 FSDPTLS--------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEM-NPKISDFGLA  537 (626)
Q Consensus       475 ~~~~~l~--------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~-~~kl~DFGla  537 (626)
                      ..++++.        ..+++..+..++.|++.||.|||+.+   ++|+||||+||++++++ .+||+|||.+
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~~~l~d~~~~  149 (257)
T cd08225          81 CDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRK---ILHRDIKSQNIFLSKNGMVAKLGDFGIA  149 (257)
T ss_pred             CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEcCCCCeEEecccccc
Confidence            4443332        23678899999999999999999988   99999999999999885 4699999987

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.70  E-value=8.2e-17  Score=163.43  Aligned_cols=129  Identities=25%  Similarity=0.413  Sum_probs=97.0

Q ss_pred             CccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCcc-cHHHHHHHH------HhccccceecchHH--HHHHhhccc
Q 006915          406 NFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQ-GLEEFKNEI------ETSNSNATIGANVK--AFVREMKTF  475 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~-~~~~~~~e~------~~~~~~~~~~~~~~--~~~~~~~~~  475 (626)
                      +|+..+.||+|++|.||+|+.. +++.||||.++..... ....+.+|+      .++|++++.+....  .++..++++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM   80 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence            4778899999999999999985 5889999998754322 233444443      44677776654432  122233333


Q ss_pred             cCCCc---------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcch
Q 006915          476 SDPTL---------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLAL  538 (626)
Q Consensus       476 ~~~~l---------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~  538 (626)
                      .+ ++         ...+++..+..++.||+.||.|||+.+   ++|+||||+||++++++.+||+|||++.
T Consensus        81 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~h~dl~p~ni~~~~~~~~~l~d~g~~~  148 (284)
T cd07836          81 DK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENR---VLHRDLKPQNLLINKRGELKLADFGLAR  148 (284)
T ss_pred             Cc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCcEEEeecchhh
Confidence            32 21         134788999999999999999999988   9999999999999999999999999873

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.69  E-value=5.7e-17  Score=164.90  Aligned_cols=132  Identities=28%  Similarity=0.428  Sum_probs=100.4

Q ss_pred             HhhcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH--HHHHhh
Q 006915          402 AATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK--AFVREM  472 (626)
Q Consensus       402 ~~~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~  472 (626)
                      ..++.|+..+.||+|+||.||+|... ++..||+|.+..... ....+.+|++.      ++++.+.+....  ..+..+
T Consensus        16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   94 (286)
T cd06614          16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVM   94 (286)
T ss_pred             CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEE
Confidence            34567888899999999999999986 588999999986443 44556666553      555555543322  122233


Q ss_pred             ccccCCCccc-------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          473 KTFSDPTLSA-------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       473 ~~~~~~~l~~-------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +++.+.++.+       .+++..+..++.|++.||.|||+.+   |+|+||+|+||+++.++.+||+|||++
T Consensus        95 e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~g---i~H~dl~p~ni~i~~~~~~~l~d~~~~  163 (286)
T cd06614          95 EYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQN---VIHRDIKSDNILLSKDGSVKLADFGFA  163 (286)
T ss_pred             eccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCChhhEEEcCCCCEEECccchh
Confidence            4444344322       5778889999999999999999987   999999999999999999999999976

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.69  E-value=4.3e-17  Score=168.19  Aligned_cols=130  Identities=22%  Similarity=0.169  Sum_probs=96.2

Q ss_pred             hhcCccccccccccCeEEEEEEEcC--CCcEEEEEEecCC-----CcccHHHHHHHHHh------ccccc-eecchHHHH
Q 006915          403 ATDNFSEANKLGKGGFGPVYKAKFP--GGQQIAVKRLSSA-----SGQGLEEFKNEIET------SNSNA-TIGANVKAF  468 (626)
Q Consensus       403 ~~~~f~~~~~lG~G~fG~Vy~~~~~--~~~~vAvK~l~~~-----~~~~~~~~~~e~~~------~~~~~-~~~~~~~~~  468 (626)
                      ..++|.+.+.||+|+||+||+|++.  +++.||||++...     .....+.|.+|++.      .+++. +...  ...
T Consensus        16 ~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~--~~~   93 (365)
T PRK09188         16 LSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT--GKD   93 (365)
T ss_pred             ccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc--CCc
Confidence            4567999999999999999999874  5778899987632     11234567788776      33432 2221  233


Q ss_pred             HHhhccccCCCcccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCC-CCCCeEECCCCcEEEEecCcch
Q 006915          469 VREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDL-KTSNILLDQEMNPKISDFGLAL  538 (626)
Q Consensus       469 ~~~~~~~~~~~l~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDl-kp~NILl~~~~~~kl~DFGla~  538 (626)
                      +..|+++.++.+..... .....++.++++||.|||+.+   |+|||| ||+|||++.++.+||+|||+|+
T Consensus        94 ~LVmE~~~G~~L~~~~~-~~~~~~~~~i~~aL~~lH~~g---IiHrDL~KP~NILv~~~~~ikLiDFGlA~  160 (365)
T PRK09188         94 GLVRGWTEGVPLHLARP-HGDPAWFRSAHRALRDLHRAG---ITHNDLAKPQNWLMGPDGEAAVIDFQLAS  160 (365)
T ss_pred             EEEEEccCCCCHHHhCc-cchHHHHHHHHHHHHHHHHCC---CeeCCCCCcceEEEcCCCCEEEEECccce
Confidence            45567777666653211 123578899999999999998   999999 9999999999999999999994

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.69  E-value=8.5e-17  Score=163.38  Aligned_cols=127  Identities=27%  Similarity=0.395  Sum_probs=94.7

Q ss_pred             ccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC--cccHHHHHHHHH------hccccceecchHHH----HHHhhc
Q 006915          407 FSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS--GQGLEEFKNEIE------TSNSNATIGANVKA----FVREMK  473 (626)
Q Consensus       407 f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~e~~------~~~~~~~~~~~~~~----~~~~~~  473 (626)
                      |++.+.||+|+||.||+|+.. +++.+|||++....  ......+.+|++      +++++.+.+.....    ++..++
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e   80 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE   80 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence            456789999999999999885 48899999998642  223344555554      46666655543321    222233


Q ss_pred             cccCCCc-------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          474 TFSDPTL-------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       474 ~~~~~~l-------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++.. ++       ...+++..++.++.||+.||+|||+.+   ++|+||||+||++++++.+||+|||++
T Consensus        81 ~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~---~~h~dl~p~nil~~~~~~~~l~d~g~~  147 (287)
T cd07840          81 YMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNG---ILHRDIKGSNILINNDGVLKLADFGLA  147 (287)
T ss_pred             cccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEEcCCCCEEEccccce
Confidence            3321 11       135778899999999999999999987   999999999999999999999999987

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.69  E-value=1.6e-16  Score=161.39  Aligned_cols=127  Identities=29%  Similarity=0.424  Sum_probs=93.4

Q ss_pred             ccccccccccCeEEEEEEEcCC-CcEEEEEEecCCCc--ccHHHHHHHHH---------hccccceecchHHH-------
Q 006915          407 FSEANKLGKGGFGPVYKAKFPG-GQQIAVKRLSSASG--QGLEEFKNEIE---------TSNSNATIGANVKA-------  467 (626)
Q Consensus       407 f~~~~~lG~G~fG~Vy~~~~~~-~~~vAvK~l~~~~~--~~~~~~~~e~~---------~~~~~~~~~~~~~~-------  467 (626)
                      |++.+.||+|+||.||+|+... ++.||||+++....  .....+.+|+.         +++++++.+.+...       
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~   80 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK   80 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence            5667899999999999999864 89999999974321  11223334432         46677766554321       


Q ss_pred             HHHhhccccCCCc--------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          468 FVREMKTFSDPTL--------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       468 ~~~~~~~~~~~~l--------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +...++++.. .+        ...+++..+..++.|++.||.|||+.+   ++|+||||+||+++.++.+||+|||++
T Consensus        81 ~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~---i~h~~l~~~nili~~~~~~~l~dfg~~  154 (287)
T cd07838          81 LTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHR---IVHRDLKPQNILVTSDGQVKIADFGLA  154 (287)
T ss_pred             eEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhEEEccCCCEEEeccCcc
Confidence            1122222221 11        124788999999999999999999987   999999999999999999999999987

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.69  E-value=7.3e-17  Score=168.09  Aligned_cols=131  Identities=27%  Similarity=0.400  Sum_probs=95.1

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC--cccHHHHHHHHHh------ccccceecchHH------HH
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS--GQGLEEFKNEIET------SNSNATIGANVK------AF  468 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~e~~~------~~~~~~~~~~~~------~~  468 (626)
                      .++|++.+.||+|+||.||+|... +++.||+|++....  ......+.+|+..      ++++.+.+....      .+
T Consensus         4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   83 (334)
T cd07855           4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV   83 (334)
T ss_pred             hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence            367888899999999999999874 58999999987532  1233445555443      555544332110      11


Q ss_pred             HHhhccccCCCc------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcch
Q 006915          469 VREMKTFSDPTL------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLAL  538 (626)
Q Consensus       469 ~~~~~~~~~~~l------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~  538 (626)
                      +..++++. +++      ...+++.....++.||+.||.|||+.+   |+||||||+||++++++.+||+|||++.
T Consensus        84 ~lv~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~dfg~~~  155 (334)
T cd07855          84 YVVMDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSAN---VIHRDLKPSNLLVNEDCELRIGDFGMAR  155 (334)
T ss_pred             EEEEehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEecccccce
Confidence            12222221 222      234788889999999999999999987   9999999999999999999999999873

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.69  E-value=6.1e-17  Score=174.27  Aligned_cols=53  Identities=34%  Similarity=0.511  Sum_probs=48.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchh
Q 006915          484 LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALD  539 (626)
Q Consensus       484 l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~  539 (626)
                      +++..+..++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||++..
T Consensus       306 ~~~~~~~~i~~ql~~aL~~lH~~~---ivHrDLKp~NILl~~~~~~kL~DFGla~~  358 (507)
T PLN03224        306 RDINVIKGVMRQVLTGLRKLHRIG---IVHRDIKPENLLVTVDGQVKIIDFGAAVD  358 (507)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCC---eecCCCchHhEEECCCCcEEEEeCcCccc
Confidence            456778889999999999999987   99999999999999999999999999843

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.69  E-value=5.5e-17  Score=165.42  Aligned_cols=131  Identities=30%  Similarity=0.338  Sum_probs=100.0

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHHHHh------ccccceecchHH--HHHHhh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNEIET------SNSNATIGANVK--AFVREM  472 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~  472 (626)
                      ++|.+.+.||+|+||.||++... +++.||||.+....   ......+.+|++.      ++++.+.+....  .++..+
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   80 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM   80 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence            46888899999999999999875 58999999986432   1233455556543      666666554322  223445


Q ss_pred             ccccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcch
Q 006915          473 KTFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLAL  538 (626)
Q Consensus       473 ~~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~  538 (626)
                      ++..++++.      ..++...+..++.|++.||.|||+.+   |+|+||+|+|||++.++.+||+|||++.
T Consensus        81 e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~dfg~~~  149 (290)
T cd05580          81 EYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLD---IVYRDLKPENLLLDSDGYIKITDFGFAK  149 (290)
T ss_pred             ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEeeCCCcc
Confidence            555555543      34678888999999999999999987   9999999999999999999999999883

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.69  E-value=8.6e-17  Score=167.41  Aligned_cols=130  Identities=25%  Similarity=0.380  Sum_probs=93.6

Q ss_pred             CccccccccccCeEEEEEEEcC-C--CcEEEEEEecCCC--cccHHHHHHHHH-------hccccceecchHHH-----H
Q 006915          406 NFSEANKLGKGGFGPVYKAKFP-G--GQQIAVKRLSSAS--GQGLEEFKNEIE-------TSNSNATIGANVKA-----F  468 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~-~--~~~vAvK~l~~~~--~~~~~~~~~e~~-------~~~~~~~~~~~~~~-----~  468 (626)
                      +|.+.+.||+|+||.||+++.. .  +..||||++....  ......+.+|+.       +++++++++.....     .
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~   80 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE   80 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence            4777889999999999999874 3  7799999987421  112334444543       46666666532211     1


Q ss_pred             HHhhccccCCCc------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcch
Q 006915          469 VREMKTFSDPTL------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLAL  538 (626)
Q Consensus       469 ~~~~~~~~~~~l------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~  538 (626)
                      +..+..+...++      ...+++..+..++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||++.
T Consensus        81 ~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivH~dlkp~Nili~~~~~~kl~Dfg~a~  153 (332)
T cd07857          81 LYLYEELMEADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSAN---VLHRDLKPGNLLVNADCELKICDFGLAR  153 (332)
T ss_pred             EEEEEecccCCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHeEEcCCCCEEeCcCCCce
Confidence            111112222222      234678888999999999999999998   9999999999999999999999999873

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.69  E-value=7.9e-17  Score=165.80  Aligned_cols=128  Identities=30%  Similarity=0.434  Sum_probs=94.8

Q ss_pred             CccccccccccCeEEEEEEEcC-CCcEEEEEEecCC---CcccHHHHHHHHH------hccccceecchHH--HHHHhhc
Q 006915          406 NFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSA---SGQGLEEFKNEIE------TSNSNATIGANVK--AFVREMK  473 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~---~~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~~  473 (626)
                      .|+..+.||+|+||.||+|+.. +++.+|||.+...   ......++.+|++      +++++.+.+....  .++.+++
T Consensus        16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   95 (308)
T cd06634          16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME   95 (308)
T ss_pred             HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEE
Confidence            4666789999999999999874 5789999998642   2222334555544      3666666654433  2223334


Q ss_pred             cccCCCc-------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          474 TFSDPTL-------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       474 ~~~~~~l-------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +.. +++       ...+++..+..++.|++.||.|||+.+   ++||||||+|||++.++.+||+|||++
T Consensus        96 ~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~  162 (308)
T cd06634          96 YCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSA  162 (308)
T ss_pred             ccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHhEEECCCCcEEECCcccc
Confidence            333 221       223678888999999999999999987   999999999999999999999999987

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.69  E-value=1.7e-16  Score=161.00  Aligned_cols=127  Identities=27%  Similarity=0.425  Sum_probs=93.2

Q ss_pred             ccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC--cccHHHHHHHHH------hccccceecchHH--HHHHhhccc
Q 006915          407 FSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS--GQGLEEFKNEIE------TSNSNATIGANVK--AFVREMKTF  475 (626)
Q Consensus       407 f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~~~~  475 (626)
                      |+..+.||+|++|.||+|... +++.||||++....  ......+.+|++      +++++++.+....  ..+..++++
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~   80 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL   80 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence            456689999999999999874 68999999987432  222344555544      3566655544332  111222332


Q ss_pred             cCCCcc--------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          476 SDPTLS--------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       476 ~~~~l~--------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      . .++.        ..+++..++.++.|+++||+|||+.+   ++|+||+|+||+++.++.+||+|||++
T Consensus        81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~---~~H~dl~p~nil~~~~~~~~l~df~~~  146 (283)
T cd07835          81 D-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHR---VLHRDLKPQNLLIDREGALKLADFGLA  146 (283)
T ss_pred             C-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCcEEEeecccc
Confidence            1 1211        24789999999999999999999987   999999999999999999999999987

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.68  E-value=1.3e-16  Score=160.56  Aligned_cols=136  Identities=24%  Similarity=0.263  Sum_probs=101.7

Q ss_pred             HHHHhhcCccccccc--cccCeEEEEEEEcC-CCcEEEEEEecCCCcccHHHHHHHH--HhccccceecchHH--HHHHh
Q 006915          399 SILAATDNFSEANKL--GKGGFGPVYKAKFP-GGQQIAVKRLSSASGQGLEEFKNEI--ETSNSNATIGANVK--AFVRE  471 (626)
Q Consensus       399 ~l~~~~~~f~~~~~l--G~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~e~--~~~~~~~~~~~~~~--~~~~~  471 (626)
                      ++....++|++.+.+  |+|+||.||+++.. ++..+|+|.+........+....++  .+++++++.+....  .++.+
T Consensus         8 ~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv   87 (267)
T PHA03390          8 ELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAIEPMVHQLMKDNPNFIKLYYSVTTLKGHVLI   87 (267)
T ss_pred             HHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchhhHHHHHHhhcCCCEEEEEEEEecCCeeEEE
Confidence            344445666666676  99999999999874 5889999998754322222222222  35777777755432  34455


Q ss_pred             hccccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCC-cEEEEecCcc
Q 006915          472 MKTFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEM-NPKISDFGLA  537 (626)
Q Consensus       472 ~~~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~-~~kl~DFGla  537 (626)
                      ++++.++++..      .+++.....++.||++||.|||+.+   ++||||||+||+++.++ .++|+|||++
T Consensus        88 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~l~dfg~~  157 (267)
T PHA03390         88 MDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHN---IIHNDIKLENVLYDRAKDRIYLCDYGLC  157 (267)
T ss_pred             EEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEeCCCCeEEEecCccc
Confidence            66666666532      5789999999999999999999998   99999999999999998 9999999987

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.68  E-value=1.4e-16  Score=166.48  Aligned_cols=131  Identities=27%  Similarity=0.404  Sum_probs=97.0

Q ss_pred             hhcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCC--cccHHHHHHHHH------hccccceecchHH-------
Q 006915          403 ATDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSAS--GQGLEEFKNEIE------TSNSNATIGANVK-------  466 (626)
Q Consensus       403 ~~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~--~~~~~~~~~e~~------~~~~~~~~~~~~~-------  466 (626)
                      ..++|++.+.||+|+||.||++.. .+++.||||++....  ......+.+|+.      +++++.+.+....       
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07880          13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF   92 (343)
T ss_pred             cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence            467899999999999999999986 468999999986422  222334545544      4666666543321       


Q ss_pred             -HHHHhhccccCCCc-----ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          467 -AFVREMKTFSDPTL-----SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       467 -~~~~~~~~~~~~~l-----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                       .++.++++. +.++     ...+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus        93 ~~~~lv~e~~-~~~l~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~g---i~H~dlkp~Nill~~~~~~kl~dfg~~  165 (343)
T cd07880          93 HDFYLVMPFM-GTDLGKLMKHEKLSEDRIQFLVYQMLKGLKYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLA  165 (343)
T ss_pred             ceEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccc
Confidence             011222222 2222     235788899999999999999999988   999999999999999999999999987

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.68  E-value=7.8e-17  Score=161.40  Aligned_cols=124  Identities=29%  Similarity=0.369  Sum_probs=92.0

Q ss_pred             ccccccCeEEEEEEEcC-CCcEEEEEEecCCCc---ccHHHHHHHHH-------hccccceecchHH--HHHHhhccccC
Q 006915          411 NKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASG---QGLEEFKNEIE-------TSNSNATIGANVK--AFVREMKTFSD  477 (626)
Q Consensus       411 ~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~e~~-------~~~~~~~~~~~~~--~~~~~~~~~~~  477 (626)
                      +.||+|+||.||+|... +++.||||.+.....   .....+..|..       +++++++.+....  .++..++++.+
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG   81 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence            57999999999999874 588999999875321   12222333322       3566666544332  23344555655


Q ss_pred             CCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          478 PTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       478 ~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +++..      .+++..+..++.||+.||.|||+.+   ++|+||+|+||+++.++.+||+|||++
T Consensus        82 ~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~  144 (260)
T cd05611          82 GDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRG---IIHRDIKPENLLIDQTGHLKLTDFGLS  144 (260)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEeecccc
Confidence            55432      4678888999999999999999987   999999999999999999999999976

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.68  E-value=9.8e-17  Score=163.86  Aligned_cols=129  Identities=27%  Similarity=0.401  Sum_probs=93.6

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCc--ccHHHHHHHHH------hccccceecchHH--HHHHhhc
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASG--QGLEEFKNEIE------TSNSNATIGANVK--AFVREMK  473 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~--~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~~  473 (626)
                      ++|+..+.||+|+||.||+|+.. +++.||||.+.....  .....+.+|++      +++++++.+....  .++.+++
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   81 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE   81 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence            46888899999999999999875 688999999864321  22344555544      4666666655432  2223334


Q ss_pred             cccCCCcc--------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECC-CCcEEEEecCcc
Q 006915          474 TFSDPTLS--------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQ-EMNPKISDFGLA  537 (626)
Q Consensus       474 ~~~~~~l~--------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~-~~~~kl~DFGla  537 (626)
                      ++. +.+.        ..+++.....++.||+.||+|||+.+   ++|+||||+||+++. ++.+||+|||++
T Consensus        82 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dl~p~nill~~~~~~~kl~dfg~~  150 (294)
T PLN00009         82 YLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHR---VLHRDLKPQNLLIDRRTNALKLADFGLA  150 (294)
T ss_pred             ccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCcceEEEECCCCEEEEcccccc
Confidence            332 1221        12456777789999999999999987   999999999999985 567999999987

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.68  E-value=6e-17  Score=162.04  Aligned_cols=129  Identities=26%  Similarity=0.296  Sum_probs=96.1

Q ss_pred             CccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHHHHh------ccccceecchHH--HHHHhhc
Q 006915          406 NFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNEIET------SNSNATIGANVK--AFVREMK  473 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~  473 (626)
                      +|.+.+.||.|+||.||+++.. +++.||+|.+....   ....+.+.+|++.      ++++.+......  .++..++
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD   80 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence            4778899999999999999985 58999999997532   2345667777654      333333221111  1112344


Q ss_pred             cccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          474 TFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       474 ~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++.++++.      ..++......++.|+++||.|||+.+   ++|+||||+||++++++.++|+|||++
T Consensus        81 ~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~l~d~~~~  147 (258)
T cd05578          81 LLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKG---IIHRDIKPDNILLDEQGHVHITDFNIA  147 (258)
T ss_pred             CCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEEcCCCCEEEeecccc
Confidence            44444432      24678888999999999999999987   999999999999999999999999987

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.68  E-value=8e-17  Score=161.36  Aligned_cols=122  Identities=30%  Similarity=0.398  Sum_probs=89.9

Q ss_pred             ccccCeEEEEEEEcCC-CcEEEEEEecCCCc---ccHHHHHHHHHh------ccccceecchHH--HHHHhhccccCCCc
Q 006915          413 LGKGGFGPVYKAKFPG-GQQIAVKRLSSASG---QGLEEFKNEIET------SNSNATIGANVK--AFVREMKTFSDPTL  480 (626)
Q Consensus       413 lG~G~fG~Vy~~~~~~-~~~vAvK~l~~~~~---~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~~~~~~l  480 (626)
                      ||+|+||.||+++... ++.+|+|.+.....   ...+.+.+|++.      ++++++.+....  .++..+++..++++
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL   80 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence            6899999999999864 89999999875432   334556666543      344433322111  11123444444444


Q ss_pred             c------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          481 S------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       481 ~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      .      ..+++..+..++.||+.||+|||+.+   ++|+||+|+||++++++.+||+|||++
T Consensus        81 ~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~di~~~nil~~~~~~~~l~dfg~~  140 (265)
T cd05579          81 ASLLENVGSLDEDVARIYIAEIVLALEYLHSNG---IIHRDLKPDNILIDSNGHLKLTDFGLS  140 (265)
T ss_pred             HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcC---eecCCCCHHHeEEcCCCCEEEEecccc
Confidence            2      24678899999999999999999987   999999999999999999999999976

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.68  E-value=1.8e-16  Score=163.56  Aligned_cols=128  Identities=30%  Similarity=0.438  Sum_probs=93.4

Q ss_pred             ccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCc---ccHHHHHHHHH------hccccceecchHH--HHHHhhcc
Q 006915          407 FSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASG---QGLEEFKNEIE------TSNSNATIGANVK--AFVREMKT  474 (626)
Q Consensus       407 f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~~~  474 (626)
                      |...+.||+|+||.||+|+.. +++.||||.+.....   .....+.+|++      +++++.+.+.+..  ..+..+++
T Consensus        23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  102 (313)
T cd06633          23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY  102 (313)
T ss_pred             hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence            455578999999999999874 588999999874322   22234555544      3666666654332  12223333


Q ss_pred             ccCCC------cccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          475 FSDPT------LSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       475 ~~~~~------l~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ..+..      ....+++..+..++.||+.||.|||+.+   |+|+||||+||++++++.+||+|||++
T Consensus       103 ~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dl~p~nili~~~~~~kL~dfg~~  168 (313)
T cd06633         103 CLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSA  168 (313)
T ss_pred             CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChhhEEECCCCCEEEeecCCC
Confidence            32210      1234788899999999999999999998   999999999999999999999999987

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.68  E-value=5.4e-18  Score=186.54  Aligned_cols=192  Identities=21%  Similarity=0.231  Sum_probs=136.9

Q ss_pred             HHHHHHhhcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCC---CcccHHHHHHHHHhcc------ccceecchH-
Q 006915          397 FESILAATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSA---SGQGLEEFKNEIETSN------SNATIGANV-  465 (626)
Q Consensus       397 ~~~l~~~~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~---~~~~~~~~~~e~~~~~------~~~~~~~~~-  465 (626)
                      ..++.-..++|.+.+.||+|+||.|..++++ .++.+|+|++++.   ......-|..|-.+.-      ++.+ ++.+ 
T Consensus        67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~L-hyAFQ  145 (1317)
T KOG0612|consen   67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQL-HYAFQ  145 (1317)
T ss_pred             HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHH-HHHhc
Confidence            3455556778999999999999999999995 4889999999862   2233445666654421      1111 1111 


Q ss_pred             --HHHHHhhccccCCCcccC------CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          466 --KAFVREMKTFSDPTLSAL------LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       466 --~~~~~~~~~~~~~~l~~~------l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                        ..++.+|+|+++|++..+      ++.....-++..|.-||.-||+.|   +|||||||.|||||..|.+||+|||.+
T Consensus       146 D~~~LYlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mg---yVHRDiKPDNvLld~~GHikLADFGsC  222 (1317)
T KOG0612|consen  146 DERYLYLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMG---YVHRDIKPDNVLLDKSGHIKLADFGSC  222 (1317)
T ss_pred             CccceEEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhcc---ceeccCCcceeEecccCcEeeccchhH
Confidence              155678999999987544      556777788999999999999998   999999999999999999999999999


Q ss_pred             hhcc-ccccCC-------CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccccCCCCCCCceeee
Q 006915          538 LDMM-DQKLHA-------SSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAFVIR  600 (626)
Q Consensus       538 ~~~~-~~~~~~-------~~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~P~~~~~  600 (626)
                      ..+. |+....       .+-.+++...        +-+-.-+..-.=+.|+||.+++|+.-+..|.|...
T Consensus       223 lkm~~dG~V~s~~aVGTPDYISPEvLqs--------~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYads  285 (1317)
T KOG0612|consen  223 LKMDADGTVRSSVAVGTPDYISPEVLQS--------QGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADS  285 (1317)
T ss_pred             HhcCCCCcEEeccccCCCCccCHHHHHh--------hcCCccccCCccchhhhHHHHHHHHcCCCcchHHH
Confidence            7665 332221       1111222211        12224556666678899998899999998877653

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.67  E-value=2.1e-18  Score=159.77  Aligned_cols=131  Identities=27%  Similarity=0.387  Sum_probs=93.8

Q ss_pred             hcCccccccccccCeEEEEEEEc-CCCcEEEEEEecC--CCcccHHHHHHHHH------hccccceecchHH--HHHHhh
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSS--ASGQGLEEFKNEIE------TSNSNATIGANVK--AFVREM  472 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~--~~~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~  472 (626)
                      ++.|++.++||+|.|+.||++.. ++|+.+|+|.+..  -+....+++.+|+.      +++++++......  ..+.++
T Consensus        10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF   89 (355)
T KOG0033|consen   10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF   89 (355)
T ss_pred             chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence            45678889999999999999976 5689999998863  23335566666655      4777776542221  112333


Q ss_pred             ccccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCC---CcEEEEecCcc
Q 006915          473 KTFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQE---MNPKISDFGLA  537 (626)
Q Consensus       473 ~~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~---~~~kl~DFGla  537 (626)
                      +.+.++.+.      ...++...-..+.||+++|.|+|.++   |||||+||+|+||...   .-+||+|||+|
T Consensus        90 e~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~---IvHRDvkP~nllLASK~~~A~vKL~~FGvA  160 (355)
T KOG0033|consen   90 DLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNG---IVHRDLKPENLLLASKAKGAAVKLADFGLA  160 (355)
T ss_pred             ecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeeeeccCCCceeecccceE
Confidence            444444432      12345555678999999999999998   9999999999999543   34899999999

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.67  E-value=1.8e-16  Score=164.67  Aligned_cols=135  Identities=27%  Similarity=0.434  Sum_probs=99.5

Q ss_pred             HHHHhhcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCC--CcccHHHHHHHHH------hccccceecchHH---
Q 006915          399 SILAATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSA--SGQGLEEFKNEIE------TSNSNATIGANVK---  466 (626)
Q Consensus       399 ~l~~~~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~--~~~~~~~~~~e~~------~~~~~~~~~~~~~---  466 (626)
                      ++...+++|+..+.||+|+||.||+++.. +++.||||++...  .....+.+..|++      +++++++.+....   
T Consensus         4 ~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~   83 (328)
T cd07856           4 TVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLE   83 (328)
T ss_pred             ceeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCC
Confidence            34456789999999999999999999864 6899999988642  1222344445544      4677776654422   


Q ss_pred             HHHHhhccccCCCcc-----cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          467 AFVREMKTFSDPTLS-----ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       467 ~~~~~~~~~~~~~l~-----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      .++..+++. ++++.     ..+.+.....++.|++.||.|||+.+   |+||||||+|||+++++.+||+|||++
T Consensus        84 ~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~ql~~aL~~LH~~~---iiH~dl~p~Nili~~~~~~~l~dfg~~  155 (328)
T cd07856          84 DIYFVTELL-GTDLHRLLTSRPLEKQFIQYFLYQILRGLKYVHSAG---VVHRDLKPSNILINENCDLKICDFGLA  155 (328)
T ss_pred             cEEEEeehh-ccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEeECCCCCEEeCccccc
Confidence            112223322 23332     23567777889999999999999998   999999999999999999999999987

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.67  E-value=2.6e-16  Score=159.52  Aligned_cols=127  Identities=27%  Similarity=0.396  Sum_probs=92.1

Q ss_pred             ccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCcc--cHHHHHHHHH------hccccceecchHH--HHHHhhccc
Q 006915          407 FSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQ--GLEEFKNEIE------TSNSNATIGANVK--AFVREMKTF  475 (626)
Q Consensus       407 f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~--~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~~~~  475 (626)
                      |+..+.||+|++|.||++... +++.+|+|++......  ....+..|++      +++++++.+....  .++..+++.
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   80 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM   80 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence            455688999999999999885 6889999998754322  3344555544      3444444433221  111223332


Q ss_pred             cCCCcc-------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          476 SDPTLS-------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       476 ~~~~l~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      .. ++.       ..+++..+..++.|++.||.|||+.+   |+|+||||+||++++++.+||+|||.+
T Consensus        81 ~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~df~~~  145 (283)
T cd05118          81 DT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHG---ILHRDLKPENLLINTEGVLKLADFGLA  145 (283)
T ss_pred             CC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCC---eeecCcCHHHEEECCCCcEEEeeeeee
Confidence            22 221       24678889999999999999999998   999999999999999999999999987

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.67  E-value=9.5e-17  Score=163.88  Aligned_cols=124  Identities=27%  Similarity=0.390  Sum_probs=94.0

Q ss_pred             ccccccCeEEEEEEEcC-CCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH--HHHHhhccccCCCcc
Q 006915          411 NKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK--AFVREMKTFSDPTLS  481 (626)
Q Consensus       411 ~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~~~~~~l~  481 (626)
                      ..||+|+||.||++... +++.||||++..........+.+|+..      ++++.+.+....  .++..+++..++++.
T Consensus        26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~  105 (292)
T cd06657          26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT  105 (292)
T ss_pred             HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence            58999999999999884 689999999875444445567677653      445544433221  222344444444443


Q ss_pred             c-----CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          482 A-----LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       482 ~-----~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      .     .+++.....++.|++.||+|||+.+   ++|+||||+||++++++.++|+|||++
T Consensus       106 ~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~g---ivH~dl~p~Nilv~~~~~~~l~dfg~~  163 (292)
T cd06657         106 DIVTHTRMNEEQIAAVCLAVLKALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFC  163 (292)
T ss_pred             HHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEcccccc
Confidence            2     3678888999999999999999987   999999999999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.67  E-value=5.4e-18  Score=157.67  Aligned_cols=129  Identities=26%  Similarity=0.466  Sum_probs=88.1

Q ss_pred             CccccccccccCeEEEEEEEcC-CCcEEEEEEecCC---CcccHH-----HHHHHHHhccccceecchHH----------
Q 006915          406 NFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSA---SGQGLE-----EFKNEIETSNSNATIGANVK----------  466 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~---~~~~~~-----~~~~e~~~~~~~~~~~~~~~----------  466 (626)
                      .|....+||+|.||+||+++.. .++.||+|++-..   ..-...     .++..++|.|++.++..|..          
T Consensus        18 ~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~   97 (376)
T KOG0669|consen   18 KYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRA   97 (376)
T ss_pred             HHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccc
Confidence            4555679999999999999985 4788999876421   111111     22233334555554433322          


Q ss_pred             HHHHhhcccc------CCCcccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          467 AFVREMKTFS------DPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       467 ~~~~~~~~~~------~~~l~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      .+..+++.+.      -++....+......+++.++..||.|+|...   |+|||+||+|+||+.++.+||+|||++
T Consensus        98 t~ylVf~~cehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~k---ilHRDmKaaNvLIt~dgilklADFGla  171 (376)
T KOG0669|consen   98 TFYLVFDFCEHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNK---ILHRDMKAANVLITKDGILKLADFGLA  171 (376)
T ss_pred             eeeeeHHHhhhhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhh---HHhhcccHhhEEEcCCceEEeeccccc
Confidence            1112222221      1122234667788889999999999999887   999999999999999999999999998

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.67  E-value=2.3e-16  Score=163.89  Aligned_cols=123  Identities=24%  Similarity=0.326  Sum_probs=89.9

Q ss_pred             cccccc--CeEEEEEEEcC-CCcEEEEEEecCCC--cccHHHHHHHHH------hccccceecchHH--HHHHhhccccC
Q 006915          411 NKLGKG--GFGPVYKAKFP-GGQQIAVKRLSSAS--GQGLEEFKNEIE------TSNSNATIGANVK--AFVREMKTFSD  477 (626)
Q Consensus       411 ~~lG~G--~fG~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~~~~~~  477 (626)
                      ..||+|  +||+||+++.. +++.||||.+....  ....+.+.+|+.      ++|++.+.+....  .++..++++..
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~   83 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY   83 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence            467777  99999999874 69999999987432  223355666643      4677776655432  22233344333


Q ss_pred             CCcc--------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCc
Q 006915          478 PTLS--------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGL  536 (626)
Q Consensus       478 ~~l~--------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl  536 (626)
                      +++.        ..+++.....++.|++.||+|||+.+   |+||||||+|||++.++.+|++||+.
T Consensus        84 ~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivHrDlkp~Nill~~~~~~~~~~~~~  147 (328)
T cd08226          84 GSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNG---YIHRNIKASHILISGDGLVSLSGLSH  147 (328)
T ss_pred             CCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEeCCCcEEEechHH
Confidence            3322        23667788899999999999999987   99999999999999999999999964

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.67  E-value=1.6e-16  Score=173.98  Aligned_cols=132  Identities=20%  Similarity=0.284  Sum_probs=84.8

Q ss_pred             hhcCccccccccccCeEEEEEEEcCC--CcEEEEEEec--------------C---CCcccHHHHHHHHH------hccc
Q 006915          403 ATDNFSEANKLGKGGFGPVYKAKFPG--GQQIAVKRLS--------------S---ASGQGLEEFKNEIE------TSNS  457 (626)
Q Consensus       403 ~~~~f~~~~~lG~G~fG~Vy~~~~~~--~~~vAvK~l~--------------~---~~~~~~~~~~~e~~------~~~~  457 (626)
                      ..++|++.+.||+|+||+||++.++.  +..+++|.+.              +   ........+.+|+.      ++|+
T Consensus       146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI  225 (501)
T PHA03210        146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI  225 (501)
T ss_pred             hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence            35789999999999999999987632  2222222110              0   11122334556654      4667


Q ss_pred             cceecchHH--HHHHhhccc--------cCCCc--ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECC
Q 006915          458 NATIGANVK--AFVREMKTF--------SDPTL--SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQ  525 (626)
Q Consensus       458 ~~~~~~~~~--~~~~~~~~~--------~~~~l--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~  525 (626)
                      +++++....  ..+..++++        ....+  ...........|+.||+.||.|||+.+   ||||||||+|||++.
T Consensus       226 v~l~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~g---IiHrDLKP~NILl~~  302 (501)
T PHA03210        226 LKIEEILRSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKK---LIHRDIKLENIFLNC  302 (501)
T ss_pred             CcEeEEEEECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECC
Confidence            766543211  000111111        11111  111224556789999999999999998   999999999999999


Q ss_pred             CCcEEEEecCcc
Q 006915          526 EMNPKISDFGLA  537 (626)
Q Consensus       526 ~~~~kl~DFGla  537 (626)
                      ++.+||+|||++
T Consensus       303 ~~~vkL~DFGla  314 (501)
T PHA03210        303 DGKIVLGDFGTA  314 (501)
T ss_pred             CCCEEEEeCCCc
Confidence            999999999998

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.67  E-value=1.4e-16  Score=151.02  Aligned_cols=125  Identities=19%  Similarity=0.231  Sum_probs=86.5

Q ss_pred             cccccccCeEEEEEEEcCCCcEEEEEEecCCCcc--c-------HHHHH-----------------HHHHhccccceecc
Q 006915          410 ANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQ--G-------LEEFK-----------------NEIETSNSNATIGA  463 (626)
Q Consensus       410 ~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~--~-------~~~~~-----------------~e~~~~~~~~~~~~  463 (626)
                      ...||+|+||.||+|...+|+.||||+++.....  .       ...|.                 .|++.  +..+.+.
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~--l~~l~~~   79 (190)
T cd05147           2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRN--LKRLVTA   79 (190)
T ss_pred             CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHH--HHHHHHC
Confidence            3689999999999999888999999999753211  1       11111                 23332  1111100


Q ss_pred             h--------HHHHHHhhccccCCCcc------cCCCHHHHHHHHHHHHHHHHHH-HhCCCCceEecCCCCCCeEECCCCc
Q 006915          464 N--------VKAFVREMKTFSDPTLS------ALLHWEMRFNIIIGIARGLLYL-HQDSRLRIIHRDLKTSNILLDQEMN  528 (626)
Q Consensus       464 ~--------~~~~~~~~~~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yL-H~~~~~~ivHrDlkp~NILl~~~~~  528 (626)
                      .        ....+.+|+++.+..+.      ..++......++.|++.+|.|| |+.+   |+||||||+|||++ ++.
T Consensus        80 ~v~~p~~~~~~~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~g---iiHrDlkP~NIli~-~~~  155 (190)
T cd05147          80 GIPCPEPILLKSHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCR---LVHADLSEYNLLYH-DGK  155 (190)
T ss_pred             CCCCCcEEEecCCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEE-CCc
Confidence            0        01113456666654321      2466788899999999999999 6777   99999999999998 478


Q ss_pred             EEEEecCcchhc
Q 006915          529 PKISDFGLALDM  540 (626)
Q Consensus       529 ~kl~DFGla~~~  540 (626)
                      ++|+|||+|...
T Consensus       156 v~LiDFG~a~~~  167 (190)
T cd05147         156 LYIIDVSQSVEH  167 (190)
T ss_pred             EEEEEccccccC
Confidence            999999998543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.67  E-value=1.7e-16  Score=165.84  Aligned_cols=131  Identities=30%  Similarity=0.430  Sum_probs=94.6

Q ss_pred             hhcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCC--CcccHHHHHHHHHh------ccccceecchHH--H----
Q 006915          403 ATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSA--SGQGLEEFKNEIET------SNSNATIGANVK--A----  467 (626)
Q Consensus       403 ~~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~--~~~~~~~~~~e~~~------~~~~~~~~~~~~--~----  467 (626)
                      ..++|...+.||+|+||.||+|+.. +++.||||++...  .......+.+|+..      ++++.+.+....  .    
T Consensus        13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07851          13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF   92 (343)
T ss_pred             ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence            4568999999999999999999885 5889999998642  12223445555543      344333321111  0    


Q ss_pred             --HHHhhccccCCCcc-----cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          468 --FVREMKTFSDPTLS-----ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       468 --~~~~~~~~~~~~l~-----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                        ++..++ +.+.++.     ..+++..+..++.|+++||+|||+.+   |+||||||+||++++++.+||+|||++
T Consensus        93 ~~~~lv~e-~~~~~L~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nill~~~~~~kL~dfg~~  165 (343)
T cd07851          93 QDVYLVTH-LMGADLNNIVKCQKLSDDHIQFLVYQILRGLKYIHSAG---IIHRDLKPSNIAVNEDCELKILDFGLA  165 (343)
T ss_pred             ccEEEEEe-cCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEcccccc
Confidence              111122 1233332     24788899999999999999999987   999999999999999999999999988

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.66  E-value=2.6e-16  Score=163.53  Aligned_cols=129  Identities=29%  Similarity=0.400  Sum_probs=94.6

Q ss_pred             CccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC--cccHHHHHHHHHh------ccccceecchHHH-------HH
Q 006915          406 NFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS--GQGLEEFKNEIET------SNSNATIGANVKA-------FV  469 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~e~~~------~~~~~~~~~~~~~-------~~  469 (626)
                      +|.+.+.||+|+||.||+|+.. .++.||||++....  ....+.+.+|++.      ++++.+.+.....       ++
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY   80 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence            4777899999999999999985 48999999987543  3334556666554      4444444322211       11


Q ss_pred             HhhccccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcch
Q 006915          470 REMKTFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLAL  538 (626)
Q Consensus       470 ~~~~~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~  538 (626)
                      ..++++. .++.      ..+++..+..++.||+.||.|||+.+   |+|+||||.|||++.++.++|+|||++.
T Consensus        81 lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~g---i~H~dlkp~nili~~~~~~~L~dfg~~~  151 (330)
T cd07834          81 IVTELME-TDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSAN---VIHRDLKPSNILVNSNCDLKICDFGLAR  151 (330)
T ss_pred             EEecchh-hhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccCceE
Confidence            1222222 1221      24778888999999999999999998   9999999999999999999999999883

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.66  E-value=2.7e-16  Score=164.33  Aligned_cols=129  Identities=26%  Similarity=0.392  Sum_probs=95.0

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH-----------
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK-----------  466 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~-----------  466 (626)
                      .+|...+.||+|+||.||+|... +++.||+|.+........+.+.+|++.      ++++.+.+....           
T Consensus         5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   84 (342)
T cd07854           5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS   84 (342)
T ss_pred             cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence            57889999999999999999874 589999999876554555566666554      444444322111           


Q ss_pred             -----HHHHhhccccCCCcc-----cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEEC-CCCcEEEEecC
Q 006915          467 -----AFVREMKTFSDPTLS-----ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLD-QEMNPKISDFG  535 (626)
Q Consensus       467 -----~~~~~~~~~~~~~l~-----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~-~~~~~kl~DFG  535 (626)
                           .++..+++.. .++.     ..+++.....++.||+.||.|||+.+   |+||||||+||+++ +++.+||+|||
T Consensus        85 ~~~~~~~~lv~e~~~-~~L~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~g---ivH~dikp~Nili~~~~~~~kl~dfg  160 (342)
T cd07854          85 LTELNSVYIVQEYME-TDLANVLEQGPLSEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANVFINTEDLVLKIGDFG  160 (342)
T ss_pred             ccccceEEEEeeccc-ccHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCceEEECCcc
Confidence                 0112233332 2332     24678888999999999999999998   99999999999997 45678999999


Q ss_pred             cc
Q 006915          536 LA  537 (626)
Q Consensus       536 la  537 (626)
                      ++
T Consensus       161 ~~  162 (342)
T cd07854         161 LA  162 (342)
T ss_pred             cc
Confidence            87

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.66  E-value=1.2e-16  Score=162.00  Aligned_cols=171  Identities=21%  Similarity=0.296  Sum_probs=123.4

Q ss_pred             CccccccccccCeEEEEEEEc-CCCcEEEEEEecCCCc--ccHHHHHHH------HHhccccceecchHH--HHHHhhcc
Q 006915          406 NFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASG--QGLEEFKNE------IETSNSNATIGANVK--AFVREMKT  474 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~--~~~~~~~~e------~~~~~~~~~~~~~~~--~~~~~~~~  474 (626)
                      -|.+.+.||+|.|..|-++++ -.|+.||||++.+...  .....+.+|      ++++|+|++....-.  .++.+++.
T Consensus        19 LYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLEL   98 (864)
T KOG4717|consen   19 LYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILEL   98 (864)
T ss_pred             eehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEe
Confidence            466778999999999999987 4799999999986432  223344455      445788877653222  23333444


Q ss_pred             ccCCCcccC-------CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEE-CCCCcEEEEecCcchhc------
Q 006915          475 FSDPTLSAL-------LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILL-DQEMNPKISDFGLALDM------  540 (626)
Q Consensus       475 ~~~~~l~~~-------l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl-~~~~~~kl~DFGla~~~------  540 (626)
                      -.++++.++       |.+....+++.||..|+.|+|...   +|||||||+||.+ .+-|-+||+|||++-.+      
T Consensus        99 GD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLH---VVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL  175 (864)
T KOG4717|consen   99 GDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLH---VVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKL  175 (864)
T ss_pred             cCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhh---hhcccCCcceeEEeeecCceEeeeccccccCCCcchh
Confidence            445555443       567777889999999999999876   9999999999977 45688999999998110      


Q ss_pred             --------------------------------------------------------cccccCCCCChHHHHHHHHHHHHh
Q 006915          541 --------------------------------------------------------MDQKLHASSKPNEILKCINVGLLC  564 (626)
Q Consensus       541 --------------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~C  564 (626)
                                                                              +|-+  ...+.....++.+++..+
T Consensus       176 ~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCK--YtvPshvS~eCrdLI~sM  253 (864)
T KOG4717|consen  176 TTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCK--YTVPSHVSKECRDLIQSM  253 (864)
T ss_pred             hcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhccc--ccCchhhhHHHHHHHHHH
Confidence                                                                    1110  112234456788899999


Q ss_pred             cccCCCCCCCHHHHHHH
Q 006915          565 VQEDPNDRPTMSDVVIM  581 (626)
Q Consensus       565 ~~~~p~~RPs~~~vl~~  581 (626)
                      +..||.+|.+..+++..
T Consensus       254 LvRdPkkRAslEeI~s~  270 (864)
T KOG4717|consen  254 LVRDPKKRASLEEIVST  270 (864)
T ss_pred             HhcCchhhccHHHHhcc
Confidence            99999999999999854

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.66  E-value=2.1e-16  Score=160.97  Aligned_cols=130  Identities=28%  Similarity=0.281  Sum_probs=93.3

Q ss_pred             CccccccccccCeEEEEEEEc----CCCcEEEEEEecCCC----cccHHHHHHHHHh-------ccccceecchHH--HH
Q 006915          406 NFSEANKLGKGGFGPVYKAKF----PGGQQIAVKRLSSAS----GQGLEEFKNEIET-------SNSNATIGANVK--AF  468 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~----~~~~~vAvK~l~~~~----~~~~~~~~~e~~~-------~~~~~~~~~~~~--~~  468 (626)
                      +|++.+.||+|+||.||+++.    .+++.||||.++...    ....+.+.+|+..       ++++.+.+....  .+
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~   80 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL   80 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence            367788999999999999975    347889999987432    1223455566553       333333321111  11


Q ss_pred             HHhhccccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcch
Q 006915          469 VREMKTFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLAL  538 (626)
Q Consensus       469 ~~~~~~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~  538 (626)
                      +.++++..++++.      ..+.+.....++.|+++||.|||+.+   ++|+||||+||+++.++.+||+|||++.
T Consensus        81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~---~~H~dl~p~nil~~~~~~~~l~dfg~~~  153 (288)
T cd05583          81 HLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLG---IIYRDIKLENILLDSEGHVVLTDFGLSK  153 (288)
T ss_pred             EEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEEECcccc
Confidence            2344555544442      34667888889999999999999987   9999999999999999999999999873

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.66  E-value=2.8e-16  Score=159.26  Aligned_cols=123  Identities=29%  Similarity=0.306  Sum_probs=88.4

Q ss_pred             cccccCeEEEEEEEcC-CCcEEEEEEecCCCc---ccHHHHHHHHH---------hccccceecchHH--HHHHhhcccc
Q 006915          412 KLGKGGFGPVYKAKFP-GGQQIAVKRLSSASG---QGLEEFKNEIE---------TSNSNATIGANVK--AFVREMKTFS  476 (626)
Q Consensus       412 ~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~e~~---------~~~~~~~~~~~~~--~~~~~~~~~~  476 (626)
                      .||+|+||.||++... +++.||||.+.....   .....+..|..         +++++.+......  .++.+++++.
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN   80 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence            4899999999999874 588999999875321   11122333321         1333333322111  2234456665


Q ss_pred             CCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          477 DPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       477 ~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++++.      ..+++..+..++.|+++||.|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus        81 g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~nili~~~~~~kl~dfg~~  144 (278)
T cd05606          81 GGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA  144 (278)
T ss_pred             CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCCCCHHHEEECCCCCEEEccCcCc
Confidence            55543      34788999999999999999999987   999999999999999999999999987

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.66  E-value=3.6e-16  Score=156.81  Aligned_cols=123  Identities=28%  Similarity=0.264  Sum_probs=93.8

Q ss_pred             ccccCeEEEEEEEcC-CCcEEEEEEecCCCc---ccHHHHHHHHHh------ccccceecchHH--HHHHhhccccCCCc
Q 006915          413 LGKGGFGPVYKAKFP-GGQQIAVKRLSSASG---QGLEEFKNEIET------SNSNATIGANVK--AFVREMKTFSDPTL  480 (626)
Q Consensus       413 lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~~~~~~l  480 (626)
                      ||.|+||.||+++.. +++.||||.+.....   ...+.+.+|++.      ++++.+.+....  .++..+++..++++
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL   80 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence            799999999999985 488999999875321   233456666553      566666554322  23344555555555


Q ss_pred             cc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcch
Q 006915          481 SA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLAL  538 (626)
Q Consensus       481 ~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~  538 (626)
                      ..      .+++..+..++.||+.||.|||+.+   ++|+||||+||+++.++.+||+|||++.
T Consensus        81 ~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---~~h~dl~~~nilv~~~~~~~l~df~~~~  141 (262)
T cd05572          81 WTILRDRGLFDEYTARFYIACVVLAFEYLHNRG---IIYRDLKPENLLLDSNGYVKLVDFGFAK  141 (262)
T ss_pred             HHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEEcCCCCEEEeeCCccc
Confidence            32      3678888899999999999999987   9999999999999999999999999973

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.65  E-value=7.9e-16  Score=158.31  Aligned_cols=132  Identities=30%  Similarity=0.402  Sum_probs=94.7

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCc--ccHHHHHHHH------HhccccceecchHHH-------
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASG--QGLEEFKNEI------ETSNSNATIGANVKA-------  467 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~--~~~~~~~~e~------~~~~~~~~~~~~~~~-------  467 (626)
                      .++|++.+.||+|+||.||+|+.. +++.+|||++.....  .....+.+|+      .+++++.+.+.....       
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   86 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK   86 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence            468999999999999999999874 588999999864321  1122333443      345655554332110       


Q ss_pred             ---HHHhhccccCC------CcccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcch
Q 006915          468 ---FVREMKTFSDP------TLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLAL  538 (626)
Q Consensus       468 ---~~~~~~~~~~~------~l~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~  538 (626)
                         ++..+++....      .....+++..+..++.|+++||.|||+.+   |+|+||||+|||+++++.+||+|||++.
T Consensus        87 ~~~~~lv~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~  163 (311)
T cd07866          87 RGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENH---ILHRDIKAANILIDNQGILKIADFGLAR  163 (311)
T ss_pred             CceEEEEEecCCcCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECcCccch
Confidence               11112222110      01234788999999999999999999998   9999999999999999999999999884

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.65  E-value=4.9e-16  Score=160.31  Aligned_cols=125  Identities=20%  Similarity=0.156  Sum_probs=88.9

Q ss_pred             ccccccccCeEEEEEEEcCCCcEEEEEEecCC--CcccHHHHHHHHHh------ccccceecchHH--HHHHhhccccCC
Q 006915          409 EANKLGKGGFGPVYKAKFPGGQQIAVKRLSSA--SGQGLEEFKNEIET------SNSNATIGANVK--AFVREMKTFSDP  478 (626)
Q Consensus       409 ~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~--~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~~~~~  478 (626)
                      +.+.+|.|+++.||+++. +++.||||++...  .......+.+|++.      ++++.+.+....  .++..++++..+
T Consensus         6 i~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~   84 (314)
T cd08216           6 IGKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYG   84 (314)
T ss_pred             hhHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCC
Confidence            345566667777777665 6899999998754  33445567777654      444444443222  122334444444


Q ss_pred             Cccc--------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          479 TLSA--------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       479 ~l~~--------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++..        .+++.....++.|++.||+|||+.+   |+||||||+|||++.++.+||+|||.+
T Consensus        85 ~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~---ivH~dlk~~Nili~~~~~~kl~d~~~~  148 (314)
T cd08216          85 SCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKG---FIHRSVKASHILLSGDGKVVLSGLRYS  148 (314)
T ss_pred             CHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCcceEEEecCCceEEecCccc
Confidence            4322        3567778889999999999999997   999999999999999999999999976

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.65  E-value=3.2e-16  Score=159.71  Aligned_cols=130  Identities=26%  Similarity=0.247  Sum_probs=94.5

Q ss_pred             CccccccccccCeEEEEEEEc----CCCcEEEEEEecCCCc----ccHHHHHHHHHh-------ccccceecchHH--HH
Q 006915          406 NFSEANKLGKGGFGPVYKAKF----PGGQQIAVKRLSSASG----QGLEEFKNEIET-------SNSNATIGANVK--AF  468 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~----~~~~~vAvK~l~~~~~----~~~~~~~~e~~~-------~~~~~~~~~~~~--~~  468 (626)
                      +|++.+.||+|+||.||+++.    .+|+.||+|++.....    ...+.+.+|+..       .+++.+......  .+
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL   80 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence            467788999999999999986    3688999999874321    223445555543       444444322211  12


Q ss_pred             HHhhccccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcch
Q 006915          469 VREMKTFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLAL  538 (626)
Q Consensus       469 ~~~~~~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~  538 (626)
                      +..+++..++++..      .+.+.....++.|++.||.|||+.+   ++||||||+|||++.++.+||+|||++.
T Consensus        81 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~  153 (290)
T cd05613          81 HLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSK  153 (290)
T ss_pred             EEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEECCCCCEEEeeCccce
Confidence            23445555554433      3667777888999999999999987   9999999999999999999999999873

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.65  E-value=1.6e-16  Score=159.54  Aligned_cols=186  Identities=21%  Similarity=0.267  Sum_probs=125.9

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCC-----CcccHHHHHHHHHh------ccccceecchHH----HH
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSA-----SGQGLEEFKNEIET------SNSNATIGANVK----AF  468 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~-----~~~~~~~~~~e~~~------~~~~~~~~~~~~----~~  468 (626)
                      .+|.+.+.||+|+||.||+|+.. +++.||+|.+...     .......+.+|++.      ++++.+.+....    .+
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL   81 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence            46888999999999999999874 5899999987532     12233456666553      566666654322    12


Q ss_pred             HHhhccccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhccc
Q 006915          469 VREMKTFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD  542 (626)
Q Consensus       469 ~~~~~~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~  542 (626)
                      ...++++.++++.      ..+++.....++.|++.||.|||+.+   ++|+||||+||+++.++.++|+|||++..+..
T Consensus        82 ~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~  158 (264)
T cd06653          82 SIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRIQT  158 (264)
T ss_pred             EEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECcccccccccc
Confidence            2345555555443      23677888899999999999999998   99999999999999999999999999975532


Q ss_pred             cccCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccccCCCCCCCc
Q 006915          543 QKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPA  596 (626)
Q Consensus       543 ~~~~~~~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~P~  596 (626)
                      ...... ....  ......+...+.-...+++...++++|+.++.++.+++.|.
T Consensus       159 ~~~~~~-~~~~--~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~  209 (264)
T cd06653         159 ICMSGT-GIKS--VTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPW  209 (264)
T ss_pred             ccccCc-cccc--cCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCC
Confidence            111000 0000  00011112222222345667778888888888888887774

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.65  E-value=4.8e-16  Score=147.84  Aligned_cols=129  Identities=21%  Similarity=0.220  Sum_probs=87.6

Q ss_pred             cccccccCeEEEEEEEcCCCcEEEEEEecCCCcc--c------------------------HHHHHHHHHh------ccc
Q 006915          410 ANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQ--G------------------------LEEFKNEIET------SNS  457 (626)
Q Consensus       410 ~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~--~------------------------~~~~~~e~~~------~~~  457 (626)
                      ...||+|+||.||+|+..+|+.||||.++.....  .                        ...+..|.+.      .++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   81 (190)
T cd05145           2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV   81 (190)
T ss_pred             CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            3689999999999999888999999998854211  0                        0011223222      111


Q ss_pred             cceecchHHHHHHhhccccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHh-CCCCceEecCCCCCCeEECCCCcEE
Q 006915          458 NATIGANVKAFVREMKTFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQ-DSRLRIIHRDLKTSNILLDQEMNPK  530 (626)
Q Consensus       458 ~~~~~~~~~~~~~~~~~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivHrDlkp~NILl~~~~~~k  530 (626)
                      ...........+.+|++..+..+.      ..++......++.+++.+|.+||+ .+   |+||||||+|||++ ++.++
T Consensus        82 ~~p~~~~~~~~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~g---ivHrDlkP~NIll~-~~~~~  157 (190)
T cd05145          82 PVPEPILLKKNVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAG---LVHGDLSEYNILYH-DGKPY  157 (190)
T ss_pred             CCceEEEecCCEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCChhhEEEE-CCCEE
Confidence            000000001113456666554221      124567788999999999999999 87   99999999999999 88999


Q ss_pred             EEecCcchhccc
Q 006915          531 ISDFGLALDMMD  542 (626)
Q Consensus       531 l~DFGla~~~~~  542 (626)
                      |+|||++..+..
T Consensus       158 liDFG~a~~~~~  169 (190)
T cd05145         158 IIDVSQAVELDH  169 (190)
T ss_pred             EEEcccceecCC
Confidence            999999965543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.65  E-value=2.5e-16  Score=159.26  Aligned_cols=131  Identities=31%  Similarity=0.331  Sum_probs=95.8

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHHHHhc-------cccceecchHH--HHHHh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNEIETS-------NSNATIGANVK--AFVRE  471 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e~~~~-------~~~~~~~~~~~--~~~~~  471 (626)
                      ++|...+.||+|+||.||+|... +++.||+|.+....   ......+.+|.+..       +++.+.+....  .+...
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv   80 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV   80 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence            46888899999999999999875 68999999987522   22234555555442       22222221110  11123


Q ss_pred             hccccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcch
Q 006915          472 MKTFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLAL  538 (626)
Q Consensus       472 ~~~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~  538 (626)
                      ++++.++++..      .+++..+..++.|++.||.|||+.+   ++|+||||+||+++.++.++|+|||++.
T Consensus        81 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~---~~H~dl~~~ni~i~~~~~~~l~df~~~~  150 (280)
T cd05581          81 LEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKG---IIHRDLKPENILLDKDMHIKITDFGTAK  150 (280)
T ss_pred             EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEecCCcccc
Confidence            44444554432      4788899999999999999999998   9999999999999999999999999873

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.65  E-value=1.1e-15  Score=154.72  Aligned_cols=127  Identities=30%  Similarity=0.430  Sum_probs=92.7

Q ss_pred             ccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC--cccHHHHHHHHHh------ccccceecchHH--HHHHhhccc
Q 006915          407 FSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS--GQGLEEFKNEIET------SNSNATIGANVK--AFVREMKTF  475 (626)
Q Consensus       407 f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~~  475 (626)
                      |+..+.||+|+||.||+|+.. +++.||+|.+....  ......+..|++.      ++++.+.+....  .++..+++.
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~   80 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC   80 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence            455678999999999999985 48999999998643  2233455555543      444444333221  111223332


Q ss_pred             cCCCcc-------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          476 SDPTLS-------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       476 ~~~~l~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      . .++.       ..+++..+..++.+++.||.|||+.+   |+|+||+|+||++++++.+||+|||++
T Consensus        81 ~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~~l~~~ni~~~~~~~~~l~d~g~~  145 (282)
T cd07829          81 D-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHR---ILHRDLKPQNILINRDGVLKLADFGLA  145 (282)
T ss_pred             C-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChheEEEcCCCCEEEecCCcc
Confidence            2 2321       24778899999999999999999997   999999999999999999999999987

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.64  E-value=3.7e-16  Score=174.46  Aligned_cols=131  Identities=31%  Similarity=0.413  Sum_probs=102.4

Q ss_pred             hcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCC--cccHHHHHHH------HHhccccceecchHH--HHHHhh
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSAS--GQGLEEFKNE------IETSNSNATIGANVK--AFVREM  472 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~--~~~~~~~~~e------~~~~~~~~~~~~~~~--~~~~~~  472 (626)
                      +-++.....||.|.||.||-|.. .+|+..|||.++-..  ......+.+|      +.|+|+++..|..+.  .....|
T Consensus      1234 ~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFM 1313 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFM 1313 (1509)
T ss_pred             eeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHH
Confidence            34566778999999999999976 459999999987432  2223333444      445888888775443  566778


Q ss_pred             ccccCCCcccCCC------HHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          473 KTFSDPTLSALLH------WEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       473 ~~~~~~~l~~~l~------~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +++.++++..++.      +....-+..|++.|+.|||+++   ||||||||.||+|+.+|.+|+.|||.|
T Consensus      1314 EyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~g---IVHRDIK~aNI~Ld~~g~iK~~DFGsa 1381 (1509)
T KOG4645|consen 1314 EYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHG---IVHRDIKPANILLDFNGLIKYGDFGSA 1381 (1509)
T ss_pred             HHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcC---ceecCCCccceeeecCCcEEeecccce
Confidence            8888888877654      3333457899999999999998   999999999999999999999999998

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.64  E-value=1e-16  Score=153.96  Aligned_cols=134  Identities=28%  Similarity=0.367  Sum_probs=105.1

Q ss_pred             HHHHHHhhcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCCcccHHHHHHHHHh-------ccccceecchHH--
Q 006915          397 FESILAATDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQGLEEFKNEIET-------SNSNATIGANVK--  466 (626)
Q Consensus       397 ~~~l~~~~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~~~~~~~~~e~~~-------~~~~~~~~~~~~--  466 (626)
                      ++++.+-|+     +.||+|+|+.|--+.. .++.++|||++.+.......+..+|++.       +|++.++...-.  
T Consensus        75 F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~  149 (463)
T KOG0607|consen   75 FEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDT  149 (463)
T ss_pred             HHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccc
Confidence            455555443     6899999999998864 6799999999998877778889999886       566666544332  


Q ss_pred             HHHHhhccccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCc---EEEEecCcc
Q 006915          467 AFVREMKTFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMN---PKISDFGLA  537 (626)
Q Consensus       467 ~~~~~~~~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~---~kl~DFGla  537 (626)
                      .|+.+++.+.++.+.      ..+.+.+..++.++||.||.|||.++   |.||||||+|||-.+...   +||+||.|.
T Consensus       150 ~FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kg---IAHRDlKPENiLC~~pn~vsPvKiCDfDLg  226 (463)
T KOG0607|consen  150 RFYLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKG---IAHRDLKPENILCESPNKVSPVKICDFDLG  226 (463)
T ss_pred             eEEEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcC---cccccCCccceeecCCCCcCceeeeccccc
Confidence            445566777766553      34667888889999999999999998   999999999999966544   899999987


Q ss_pred             h
Q 006915          538 L  538 (626)
Q Consensus       538 ~  538 (626)
                      .
T Consensus       227 S  227 (463)
T KOG0607|consen  227 S  227 (463)
T ss_pred             c
Confidence            3

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.64  E-value=3.6e-16  Score=168.46  Aligned_cols=139  Identities=31%  Similarity=0.462  Sum_probs=107.5

Q ss_pred             cCHHHHHHhhcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCCcccHHHHHHHHH-------hccccceecchH-
Q 006915          395 IDFESILAATDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQGLEEFKNEIE-------TSNSNATIGANV-  465 (626)
Q Consensus       395 ~~~~~l~~~~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~~~~~~~~~e~~-------~~~~~~~~~~~~-  465 (626)
                      +.++.+...++-|++.+.||+|.+|.||+++. ++++.+|||++.... ...+++..|.+       ++|++...|+.. 
T Consensus         9 ~~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~-d~deEiE~eynil~~~~~hpnv~~fyg~~~k   87 (953)
T KOG0587|consen    9 IDLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE-DEEEEIELEYNMLKKYSHHPNVATFYGAFIK   87 (953)
T ss_pred             cchhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc-cccHHHHHHHHHHHhccCCCCcceEEEEEEE
Confidence            34445556677899999999999999999987 468899999987543 22333333333       266666665433 


Q ss_pred             ------HHHHHhhccccCCCc--------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEE
Q 006915          466 ------KAFVREMKTFSDPTL--------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKI  531 (626)
Q Consensus       466 ------~~~~~~~~~~~~~~l--------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl  531 (626)
                            ..++.+||++.+++.        ...+.|....-|+++++.||.+||...   ++|||||-.||||+.++.+||
T Consensus        88 ~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nk---viHRDikG~NiLLT~e~~VKL  164 (953)
T KOG0587|consen   88 KDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNK---VIHRDIKGQNVLLTENAEVKL  164 (953)
T ss_pred             ecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcc---eeeecccCceEEEeccCcEEE
Confidence                  256677887776654        344678888889999999999999886   999999999999999999999


Q ss_pred             EecCcc
Q 006915          532 SDFGLA  537 (626)
Q Consensus       532 ~DFGla  537 (626)
                      .|||++
T Consensus       165 vDFGvS  170 (953)
T KOG0587|consen  165 VDFGVS  170 (953)
T ss_pred             eeeeee
Confidence            999998

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.64  E-value=7.2e-16  Score=154.41  Aligned_cols=128  Identities=27%  Similarity=0.352  Sum_probs=88.2

Q ss_pred             CccccccccccCeEEEEEEEcCC-CcEEEEEEecCCC-----cccHHHHHHHHH------hccccceecchHH--HHHHh
Q 006915          406 NFSEANKLGKGGFGPVYKAKFPG-GQQIAVKRLSSAS-----GQGLEEFKNEIE------TSNSNATIGANVK--AFVRE  471 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~~-~~~vAvK~l~~~~-----~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~  471 (626)
                      +|.+.+.||+|+||.||+++... +..+++|.++...     .....++..|+.      +++++++.+....  .+...
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII   80 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence            46778999999999999998743 4556666654311     122223444443      3555544433222  12233


Q ss_pred             hccccCCCcc----------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          472 MKTFSDPTLS----------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       472 ~~~~~~~~l~----------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++++.++++.          ..+++..++.++.|++.||.|||+.+   ++|+||||+||++++ +.+||+|||++
T Consensus        81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~~l~~~nili~~-~~~~l~d~g~~  152 (260)
T cd08222          81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRR---ILHRDLKAKNIFLKN-NLLKIGDFGVS  152 (260)
T ss_pred             EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC---ccccCCChhheEeec-CCEeecccCce
Confidence            4555544442          34678888999999999999999987   999999999999975 56999999977

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.64  E-value=2.9e-16  Score=144.33  Aligned_cols=128  Identities=23%  Similarity=0.340  Sum_probs=95.3

Q ss_pred             hcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCCcccHHHHHHHHHh-------ccccceecchHH----HHHHh
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQGLEEFKNEIET-------SNSNATIGANVK----AFVRE  471 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~~~~~~~~~e~~~-------~~~~~~~~~~~~----~~~~~  471 (626)
                      .++|++.+++|+|.|++||.|.. .+.+.++||.+++..   .+.+.+|+.+       +|++.++.....    ..-..
T Consensus        37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk---kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLi  113 (338)
T KOG0668|consen   37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK---KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLI  113 (338)
T ss_pred             cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH---HHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhH
Confidence            46789999999999999999975 568899999998643   4567777765       555555432211    11122


Q ss_pred             hccccCC---CcccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCC-CcEEEEecCcc
Q 006915          472 MKTFSDP---TLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQE-MNPKISDFGLA  537 (626)
Q Consensus       472 ~~~~~~~---~l~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~-~~~kl~DFGla  537 (626)
                      +++..+.   .+...|.......++.++++||.|+|+.|   |+|||+||.|++||.. ..++|+|+|||
T Consensus       114 FE~v~n~Dfk~ly~tl~d~dIryY~~elLkALdyCHS~G---ImHRDVKPhNvmIdh~~rkLrlIDWGLA  180 (338)
T KOG0668|consen  114 FEYVNNTDFKQLYPTLTDYDIRYYIYELLKALDYCHSMG---IMHRDVKPHNVMIDHELRKLRLIDWGLA  180 (338)
T ss_pred             hhhhccccHHHHhhhhchhhHHHHHHHHHHHHhHHHhcC---cccccCCcceeeechhhceeeeeecchH
Confidence            3333332   23444666677778999999999999998   9999999999999865 55999999999

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.63  E-value=3.2e-16  Score=177.11  Aligned_cols=134  Identities=26%  Similarity=0.351  Sum_probs=102.6

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCc---ccHHHHHHHHH------hccccceecchHH--HHHHh
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASG---QGLEEFKNEIE------TSNSNATIGANVK--AFVRE  471 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~  471 (626)
                      .++|.+.++||+|+||.||+|+.. +++.||||+++....   .....+..|+.      +++++.++.....  .++.+
T Consensus         3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV   82 (669)
T cd05610           3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV   82 (669)
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence            357889999999999999999985 589999999975321   22344555544      3556665533221  33455


Q ss_pred             hccccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhc
Q 006915          472 MKTFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM  540 (626)
Q Consensus       472 ~~~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~  540 (626)
                      ++++.++++..      .+.+...+.|+.||+.||.|||..+   |+||||||+||||+.++.+||+|||+++..
T Consensus        83 mEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~g---IiHrDLKP~NILl~~~g~vkL~DFGls~~~  154 (669)
T cd05610          83 MEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHG---IIHRDLKPDNMLISNEGHIKLTDFGLSKVT  154 (669)
T ss_pred             EeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCccHHHEEEcCCCCEEEEeCCCCccc
Confidence            66666666543      3567888999999999999999987   999999999999999999999999999644

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.63  E-value=5.1e-16  Score=157.95  Aligned_cols=128  Identities=27%  Similarity=0.348  Sum_probs=89.3

Q ss_pred             cccccccCeEEEEEEEcC-CCcEEEEEEecCC--CcccHHHHHHHHHhc------cccceecchHH--HHHHhhcccc--
Q 006915          410 ANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSA--SGQGLEEFKNEIETS------NSNATIGANVK--AFVREMKTFS--  476 (626)
Q Consensus       410 ~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~--~~~~~~~~~~e~~~~------~~~~~~~~~~~--~~~~~~~~~~--  476 (626)
                      .+.||.|.||+||-|+++ +|+.||||++.+.  ...+...+++|+.+.      .++.+.-.+..  ....+||.+.  
T Consensus       569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GD  648 (888)
T KOG4236|consen  569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGD  648 (888)
T ss_pred             HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcch
Confidence            378999999999999984 6999999999753  334557788887763      33332211100  1111222221  


Q ss_pred             -----CCCcccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCC---CcEEEEecCcchhc
Q 006915          477 -----DPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQE---MNPKISDFGLALDM  540 (626)
Q Consensus       477 -----~~~l~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~---~~~kl~DFGla~~~  540 (626)
                           -.+-...|+.+.-.-++.||+.||.|||.++   |+|+||||+||||.+.   -++||+|||+|+.+
T Consensus       649 MLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~kn---IvHCDLKPENVLLas~~~FPQvKlCDFGfARiI  717 (888)
T KOG4236|consen  649 MLEMILSSEKGRLPERITKFLVTQILVALRYLHFKN---IVHCDLKPENVLLASASPFPQVKLCDFGFARII  717 (888)
T ss_pred             HHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcc---eeeccCCchheeeccCCCCCceeeccccceeec
Confidence                 1122334566666678999999999999998   9999999999999654   46999999999544

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.63  E-value=8e-16  Score=155.72  Aligned_cols=122  Identities=33%  Similarity=0.361  Sum_probs=89.3

Q ss_pred             ccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHHHHh------ccccceecchHH--HHHHhhccccCCCc
Q 006915          413 LGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNEIET------SNSNATIGANVK--AFVREMKTFSDPTL  480 (626)
Q Consensus       413 lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~~~~~~l  480 (626)
                      ||+|+||+||++... +++.||+|.+....   ......+..|++.      ++++.+.+....  .++..++++.++++
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL   80 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence            699999999999864 58899999986432   1223344555544      444444432211  22334455544443


Q ss_pred             c--------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          481 S--------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       481 ~--------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      .        ..+++..++.++.|++.||.|||+.+   ++|+||+|+||++++++.+||+|||++
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~Nil~~~~~~~~l~dfg~~  142 (277)
T cd05577          81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRR---IVYRDLKPENVLLDDHGNVRISDLGLA  142 (277)
T ss_pred             HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEccCcch
Confidence            2        24678888999999999999999998   999999999999999999999999987

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.63  E-value=5.3e-16  Score=145.92  Aligned_cols=125  Identities=29%  Similarity=0.443  Sum_probs=86.3

Q ss_pred             cccccccCeEEEEEEEc-CCCcEEEEEEecCC--CcccHHHHHHHHHh------ccccceec----chHH--HHHHhhcc
Q 006915          410 ANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSA--SGQGLEEFKNEIET------SNSNATIG----ANVK--AFVREMKT  474 (626)
Q Consensus       410 ~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~--~~~~~~~~~~e~~~------~~~~~~~~----~~~~--~~~~~~~~  474 (626)
                      .+.||-|+||.||..+. ++|+.||.|++...  +-...+.+.+|++.      .|++..+.    .++.  .-+.++..
T Consensus        58 DRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TE  137 (449)
T KOG0664|consen   58 DRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTE  137 (449)
T ss_pred             CCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHH
Confidence            47899999999999998 47999999998642  22234556666554      23222111    1111  11111111


Q ss_pred             ccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          475 FSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       475 ~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +...++.+      .|+.....-++.||++||.|||+.+   |.||||||.|.|++.+-.+||+|||+|
T Consensus       138 LmQSDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~---ILHRDIKPGNLLVNSNCvLKICDFGLA  203 (449)
T KOG0664|consen  138 LMQSDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTAN---ILHRDIKPGNLLVNSNCILKICDFGLA  203 (449)
T ss_pred             HHHhhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcc---hhhccCCCccEEeccCceEEecccccc
Confidence            22222322      2445555668899999999999998   999999999999999999999999999

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.63  E-value=9.9e-16  Score=159.60  Aligned_cols=130  Identities=27%  Similarity=0.339  Sum_probs=93.0

Q ss_pred             cCcc-ccccccccCeEEEEEEEcC-CCcEEEEEEecCCCccc--------------HHHHHHHHH------hccccceec
Q 006915          405 DNFS-EANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQG--------------LEEFKNEIE------TSNSNATIG  462 (626)
Q Consensus       405 ~~f~-~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~--------------~~~~~~e~~------~~~~~~~~~  462 (626)
                      ++|. +.+.||+|+||.||+|... +++.||||.++......              ...+.+|++      +++++.+.+
T Consensus         8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~   87 (335)
T PTZ00024          8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD   87 (335)
T ss_pred             cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence            3444 3467999999999999874 58999999986432211              113444544      466666665


Q ss_pred             chHH--HHHHhhccccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEec
Q 006915          463 ANVK--AFVREMKTFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDF  534 (626)
Q Consensus       463 ~~~~--~~~~~~~~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DF  534 (626)
                      ....  .++..++++. +++.      ..+++.....++.|++.||.|||+.+   |+|+||||+||+++.++.+||+||
T Consensus        88 ~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~---i~H~dl~~~nill~~~~~~kl~df  163 (335)
T PTZ00024         88 VYVEGDFINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWY---FMHRDLSPANIFINSKGICKIADF  163 (335)
T ss_pred             EEecCCcEEEEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHeEECCCCCEEECCc
Confidence            4332  1222333332 2322      23677888999999999999999988   999999999999999999999999


Q ss_pred             Ccch
Q 006915          535 GLAL  538 (626)
Q Consensus       535 Gla~  538 (626)
                      |++.
T Consensus       164 g~~~  167 (335)
T PTZ00024        164 GLAR  167 (335)
T ss_pred             ccee
Confidence            9874

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.62  E-value=4.6e-16  Score=144.16  Aligned_cols=181  Identities=20%  Similarity=0.284  Sum_probs=117.2

Q ss_pred             hcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCCcccHHHHHHHHHhcc-------ccceecchHH-HHHHhhcc
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQGLEEFKNEIETSN-------SNATIGANVK-AFVREMKT  474 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~~~~~~~~~e~~~~~-------~~~~~~~~~~-~~~~~~~~  474 (626)
                      .++|.+.++||.|+||.+|.|.. .+|+.||||.-......  .++..|..+.+       +..+.++..+ .+-.....
T Consensus        14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h--pqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMd   91 (341)
T KOG1163|consen   14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH--PQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMD   91 (341)
T ss_pred             ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCC--cchhHHHHHHHHhccCCCCchhhhhccccccceeeee
Confidence            46799999999999999999976 67999999997654332  22333433322       2222222111 11111223


Q ss_pred             ccCCCcccCC-------CHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCC---CcEEEEecCcchhccccc
Q 006915          475 FSDPTLSALL-------HWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQE---MNPKISDFGLALDMMDQK  544 (626)
Q Consensus       475 ~~~~~l~~~l-------~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~---~~~kl~DFGla~~~~~~~  544 (626)
                      +.++++.+++       +..+.+-++.|++.-++|+|.++   +|||||||+|.|..-+   ..+-|+|||||+.+.|.+
T Consensus        92 LLGPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~---fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~  168 (341)
T KOG1163|consen   92 LLGPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRN---FIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIR  168 (341)
T ss_pred             ccCccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhc---cccccCCccceeeccccccceEEEEeccchhhhcccc
Confidence            4566665543       45666778999999999999998   9999999999999643   458999999999988877


Q ss_pred             cCCCCChHHHH------HHHHHH-HHhcccCCCCCCCHHHHHHHhccccccCCCCCCC
Q 006915          545 LHASSKPNEIL------KCINVG-LLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRP  595 (626)
Q Consensus       545 ~~~~~~~~~~~------~~~~~~-~~C~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~P  595 (626)
                      .....+..+-.      +...+. ..|.+.      +-.+++++++.++.....+..|
T Consensus       169 t~~HIpyre~r~ltGTaRYASinAh~g~eq------SRRDDmeSvgYvLmYfnrG~LP  220 (341)
T KOG1163|consen  169 TRQHIPYREDRNLTGTARYASINAHLGIEQ------SRRDDMESVGYVLMYFNRGSLP  220 (341)
T ss_pred             ccccCccccCCccceeeeehhhhhhhhhhh------hhhhhhhhhcceeeeeecCCCc
Confidence            66554433322      122221 122322      3355666677766666666655

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.62  E-value=9e-16  Score=148.50  Aligned_cols=185  Identities=21%  Similarity=0.291  Sum_probs=131.9

Q ss_pred             cCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCCcccHHHHHHHHHh-------cccc--ceecchHHHHHHhhcc
Q 006915          405 DNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQGLEEFKNEIET-------SNSN--ATIGANVKAFVREMKT  474 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~~~~~~~~~e~~~-------~~~~--~~~~~~~~~~~~~~~~  474 (626)
                      -+|.+.++||+|+||+++.|+. -+++.||||.-...+..  -++..|...       ..+.  ..+|.+-..-+.++ .
T Consensus        28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~A--PQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVi-d  104 (449)
T KOG1165|consen   28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEA--PQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVI-D  104 (449)
T ss_pred             ccceeccccccCcceeeecccccccCceEEEEeccccCCc--chHHHHHHHHHHHcCCCCCCceeeeccccchhhhhh-h
Confidence            3788999999999999999974 57899999986644322  122333222       2222  22333322222222 3


Q ss_pred             ccCCCcccCCCH-------HHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCC-----CcEEEEecCcchhccc
Q 006915          475 FSDPTLSALLHW-------EMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQE-----MNPKISDFGLALDMMD  542 (626)
Q Consensus       475 ~~~~~l~~~l~~-------~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~-----~~~kl~DFGla~~~~~  542 (626)
                      +++++|.++++|       +....+|+|++.-++|+|++.   +|.|||||+|+||...     ..+.|+|||+|+++.|
T Consensus       105 LLGPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~---LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrD  181 (449)
T KOG1165|consen  105 LLGPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKD---LIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRD  181 (449)
T ss_pred             hhCcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcc---eeecccCccceeecCCCCCCCceEEEEeccchhhhcC
Confidence            456777776665       455779999999999999998   9999999999999643     4589999999999999


Q ss_pred             cccCCCCChHHHHHHHHHH-HHhcccCCCCCCCHHHHHHHhccccccCCCCCCC
Q 006915          543 QKLHASSKPNEILKCINVG-LLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRP  595 (626)
Q Consensus       543 ~~~~~~~~~~~~~~~~~~~-~~C~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~P  595 (626)
                      +......+..|-..+--.| ++-+...-.+.-+-++++++|+-+......+..|
T Consensus       182 p~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLP  235 (449)
T KOG1165|consen  182 PKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLP  235 (449)
T ss_pred             ccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCc
Confidence            9998888877665554333 2345566666678888999998887666666655

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.62  E-value=2.8e-16  Score=156.68  Aligned_cols=131  Identities=28%  Similarity=0.325  Sum_probs=100.5

Q ss_pred             CccccccccccCeEEEEEEEc-CCCcEEEEEEecCCC-cc------------cHHHHHHHHHhccccceecchH---HHH
Q 006915          406 NFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSAS-GQ------------GLEEFKNEIETSNSNATIGANV---KAF  468 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~-~~------------~~~~~~~e~~~~~~~~~~~~~~---~~~  468 (626)
                      +|-+..+||+|||++||++.. ...+.||||+-.... ..            .+..+..|+.++.+|++..+..   ..|
T Consensus       464 RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsF  543 (775)
T KOG1151|consen  464 RYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSF  543 (775)
T ss_pred             HHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccc
Confidence            466678999999999999976 457789999864211 00            0122334556677777766433   367


Q ss_pred             HHhhccccCCCcccC------CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEEC---CCCcEEEEecCcc
Q 006915          469 VREMKTFSDPTLSAL------LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLD---QEMNPKISDFGLA  537 (626)
Q Consensus       469 ~~~~~~~~~~~l~~~------l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~---~~~~~kl~DFGla  537 (626)
                      +.+++|..+.++.-+      ++.++...|+.||..||.||.+. .+||||-||||.||||.   .-|.+||+||||+
T Consensus       544 CTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITDFGLS  620 (775)
T KOG1151|consen  544 CTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITDFGLS  620 (775)
T ss_pred             eeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeeecchh
Confidence            788898888877554      45778889999999999999988 58999999999999994   3478999999998

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.61  E-value=7.3e-16  Score=145.17  Aligned_cols=129  Identities=23%  Similarity=0.359  Sum_probs=95.3

Q ss_pred             cCccccccccccCeEEEEEEEcCC-CcEEEEEEecCCCcccHHHHHHHHHhccccceecchHH----------HHHHhhc
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFPG-GQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVK----------AFVREMK  473 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~~-~~~vAvK~l~~~~~~~~~~~~~e~~~~~~~~~~~~~~~----------~~~~~~~  473 (626)
                      +.|.+.+.||+|.||.+-+++++. .+.+++|.+... ...+.+|.+|..-.-.+...+..+.          .|+..+|
T Consensus        24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p-~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE  102 (378)
T KOG1345|consen   24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP-QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQE  102 (378)
T ss_pred             hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcc-hhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeec
Confidence            357788999999999999999964 778999988753 3457889999764221111111111          2233455


Q ss_pred             cccCCCcccC-----CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEE-C-CCCcEEEEecCcc
Q 006915          474 TFSDPTLSAL-----LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILL-D-QEMNPKISDFGLA  537 (626)
Q Consensus       474 ~~~~~~l~~~-----l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl-~-~~~~~kl~DFGla  537 (626)
                      +.+.++|..-     +.+..-.+++.|++.|+.|||+++   +||||||.+|||| + +..++||+|||+.
T Consensus       103 ~aP~gdL~snv~~~GigE~~~K~v~~ql~SAi~fMHskn---lVHRdlK~eNiLif~~df~rvKlcDFG~t  170 (378)
T KOG1345|consen  103 FAPRGDLRSNVEAAGIGEANTKKVFAQLLSAIEFMHSKN---LVHRDLKAENILIFDADFYRVKLCDFGLT  170 (378)
T ss_pred             cCccchhhhhcCcccccHHHHHHHHHHHHHHHHHhhccc---hhhcccccceEEEecCCccEEEeeecccc
Confidence            6666665443     446666789999999999999998   9999999999999 3 4457999999998

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.59  E-value=1.6e-15  Score=159.17  Aligned_cols=175  Identities=20%  Similarity=0.213  Sum_probs=119.8

Q ss_pred             hcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCCcccHHH---HHHHHHhccccceecchHH--HHHHhhccccC
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQGLEE---FKNEIETSNSNATIGANVK--AFVREMKTFSD  477 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~~~~~~---~~~e~~~~~~~~~~~~~~~--~~~~~~~~~~~  477 (626)
                      ++.|.....+|.|+|+.|-.+.+ .+++..|||++.+...+..++   ...-..++|++.+.+.+..  ..+.+++...+
T Consensus       321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l~g  400 (612)
T KOG0603|consen  321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELLDG  400 (612)
T ss_pred             chhhccccccCCCCccceeeeeccccccchhheeccccccccccccchhhhhcCCCcceeecceecCCceeeeeehhccc
Confidence            66778888899999999999987 458899999998652222221   2222345777766654433  23344454444


Q ss_pred             CCcccC-----CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEE-CCCCcEEEEecCcchhcccc----cc--
Q 006915          478 PTLSAL-----LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILL-DQEMNPKISDFGLALDMMDQ----KL--  545 (626)
Q Consensus       478 ~~l~~~-----l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl-~~~~~~kl~DFGla~~~~~~----~~--  545 (626)
                      +.+...     .....+..|+.+|+.++.|||+++   ||||||||+|||+ ++.+.++|+|||.+.++...    .+  
T Consensus       401 ~ell~ri~~~~~~~~e~~~w~~~lv~Av~~LH~~g---vvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~~tp~~t~  477 (612)
T KOG0603|consen  401 GELLRRIRSKPEFCSEASQWAAELVSAVDYLHEQG---VVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSCDTPALTL  477 (612)
T ss_pred             cHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcC---eeecCCChhheeecCCCCcEEEEEechhhhCchhhcccchhh
Confidence            433221     222456679999999999999998   9999999999999 68999999999998322111    00  


Q ss_pred             --------------------------------------------------CCCCChHHHHHHHHHHHHhcccCCCCCCCH
Q 006915          546 --------------------------------------------------HASSKPNEILKCINVGLLCVQEDPNDRPTM  575 (626)
Q Consensus       546 --------------------------------------------------~~~~~~~~~~~~~~~~~~C~~~~p~~RPs~  575 (626)
                                                                        ...+.........++..+|++.||.+||+|
T Consensus       478 ~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~  557 (612)
T KOG0603|consen  478 QYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQMPKFSECVSDEAKDLLQQLLQVDPALRLGA  557 (612)
T ss_pred             cccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhcCCccccccCHHHHHHHHHhccCChhhCcCh
Confidence                                                              000111122345567778999999999999


Q ss_pred             HHHHHH
Q 006915          576 SDVVIM  581 (626)
Q Consensus       576 ~~vl~~  581 (626)
                      .++...
T Consensus       558 ~~i~~h  563 (612)
T KOG0603|consen  558 DEIGAH  563 (612)
T ss_pred             hhhccC
Confidence            999765

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.59  E-value=5.3e-15  Score=147.01  Aligned_cols=122  Identities=31%  Similarity=0.292  Sum_probs=88.6

Q ss_pred             ccccCeEEEEEEEcC-CCcEEEEEEecCCCc---ccHHHHHHHHHh------ccccceecchHH--HHHHhhccccCCCc
Q 006915          413 LGKGGFGPVYKAKFP-GGQQIAVKRLSSASG---QGLEEFKNEIET------SNSNATIGANVK--AFVREMKTFSDPTL  480 (626)
Q Consensus       413 lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~~~~~~l  480 (626)
                      ||+|+||.||++... +++.+|+|.+.....   .....+..|++.      ++++.+.+....  ..+..++++.++++
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   80 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL   80 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence            799999999999885 488999999875432   234466666654      222222211110  11123344444444


Q ss_pred             cc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          481 SA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       481 ~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ..      .+++.....++.|++.||.|||+.+   ++|+||||+||+++.++.++|+|||++
T Consensus        81 ~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~---~~H~~l~p~ni~~~~~~~~~l~d~~~~  140 (250)
T cd05123          81 FSHLSKEGRFSEERARFYAAEIVLALEYLHSLG---IIYRDLKPENILLDADGHIKLTDFGLA  140 (250)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcceEEEcCCCcEEEeecCcc
Confidence            32      4678889999999999999999987   999999999999999999999999987

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.59  E-value=2.1e-15  Score=149.00  Aligned_cols=118  Identities=21%  Similarity=0.122  Sum_probs=86.1

Q ss_pred             cCeEEEEEEEcC-CCcEEEEEEecCCCcccHHHHHHHH--HhccccceecchHH--HHHHhhccccCCCccc------CC
Q 006915          416 GGFGPVYKAKFP-GGQQIAVKRLSSASGQGLEEFKNEI--ETSNSNATIGANVK--AFVREMKTFSDPTLSA------LL  484 (626)
Q Consensus       416 G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~e~--~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~------~l  484 (626)
                      |.||.||+++.. +++.+|+|++........ +.....  .+++++.+.+....  .++..++++.++++..      .+
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l   82 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSSEYSR-ERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKFLNI   82 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchhhhhh-HHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHHhcCC
Confidence            889999999884 589999999976432211 111111  12555555443222  2234456666665533      36


Q ss_pred             CHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          485 HWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       485 ~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++.....++.|++.||.|||+.+   |+||||||+||+++.++.++|+|||++
T Consensus        83 ~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~df~~~  132 (237)
T cd05576          83 PEECVKRWAAEMVVALDALHREG---IVCRDLNPNNILLDDRGHIQLTYFSRW  132 (237)
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCCEEEecccch
Confidence            78888999999999999999987   999999999999999999999999975

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.58  E-value=1e-14  Score=139.91  Aligned_cols=167  Identities=34%  Similarity=0.485  Sum_probs=116.6

Q ss_pred             ccccCeEEEEEEEcCC-CcEEEEEEecCCCcc-cHHHHHHHHHh------ccccceecchHH--HHHHhhccccCCCcc-
Q 006915          413 LGKGGFGPVYKAKFPG-GQQIAVKRLSSASGQ-GLEEFKNEIET------SNSNATIGANVK--AFVREMKTFSDPTLS-  481 (626)
Q Consensus       413 lG~G~fG~Vy~~~~~~-~~~vAvK~l~~~~~~-~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~~~~~~l~-  481 (626)
                      ||+|.+|.||+++... ++.++||.+...... ....+.+|++.      .+++.+.+....  .....+++..+.++. 
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~   80 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD   80 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence            6899999999999864 899999999865432 23556666554      334444333222  111223333333332 


Q ss_pred             ------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECC-CCcEEEEecCcchhccccc----------
Q 006915          482 ------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQ-EMNPKISDFGLALDMMDQK----------  544 (626)
Q Consensus       482 ------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~-~~~~kl~DFGla~~~~~~~----------  544 (626)
                            ..+++..+..++.+++++|.|||+.+   ++|+||+|.||+++. ++.++|+|||.+.......          
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~  157 (215)
T cd00180          81 LLKENEGKLSEDEILRILLQILEGLEYLHSNG---IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTP  157 (215)
T ss_pred             HHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccCCC
Confidence                  23678889999999999999999997   999999999999999 8999999999885332221          


Q ss_pred             ------cCCC-------CCh-------HHHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 006915          545 ------LHAS-------SKP-------NEILKCINVGLLCVQEDPNDRPTMSDVVIML  582 (626)
Q Consensus       545 ------~~~~-------~~~-------~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L  582 (626)
                            ....       .+.       -++..+.+++..|++.+|.+||++.+++..|
T Consensus       158 ~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l~~~~~~l~~~l~~~p~~R~~~~~l~~~~  215 (215)
T cd00180         158 AYMAPEVLLGKGYYSEKSDIWSLGVILYELPELKDLIRKMLQKDPEKRPSAKEILEHL  215 (215)
T ss_pred             CccChhHhcccCCCCchhhhHHHHHHHHHHHHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence                  0000       000       0114667788899999999999999998653

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.56  E-value=8.5e-16  Score=159.47  Aligned_cols=129  Identities=22%  Similarity=0.298  Sum_probs=100.5

Q ss_pred             CccccccccccCeEEEEEEEc-CCCcEEEEEEecCCCc---------ccHHHHHHHHHhccccceecchH--HHHHHhhc
Q 006915          406 NFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASG---------QGLEEFKNEIETSNSNATIGANV--KAFVREMK  473 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~---------~~~~~~~~e~~~~~~~~~~~~~~--~~~~~~~~  473 (626)
                      -|..++.||-|+||+|.+++- +....+|+|.|++.+.         ..+.+++.|....-+|++.-...  ..++.+|+
T Consensus       630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMd  709 (1034)
T KOG0608|consen  630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD  709 (1034)
T ss_pred             ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEe
Confidence            478889999999999999965 4477899999986432         22334555555455666653222  25667889


Q ss_pred             cccCCCcccC------CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          474 TFSDPTLSAL------LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       474 ~~~~~~l~~~------l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      |+.++++..+      +.+....-++.++..|+++.|..|   +|||||||.|||||.+|.+||+||||+
T Consensus       710 YIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmG---FIHRDiKPDNILIDrdGHIKLTDFGLC  776 (1034)
T KOG0608|consen  710 YIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLC  776 (1034)
T ss_pred             ccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhcc---ceecccCccceEEccCCceeeeecccc
Confidence            9999887654      445566668889999999999998   999999999999999999999999998

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.56  E-value=1.5e-15  Score=163.10  Aligned_cols=124  Identities=31%  Similarity=0.460  Sum_probs=81.1

Q ss_pred             ccccccccccCeEE-EEEEEcCCCcEEEEEEecCCCcccHHHHHHHHH-------hccccceecchHH--------HHH-
Q 006915          407 FSEANKLGKGGFGP-VYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIE-------TSNSNATIGANVK--------AFV-  469 (626)
Q Consensus       407 f~~~~~lG~G~fG~-Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~e~~-------~~~~~~~~~~~~~--------~~~-  469 (626)
                      |...+.+|.|+.|+ ||+|.+ +++.||||++-...   ..-..+|+.       ++|+++..+....        .++ 
T Consensus       511 ~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e~---~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~  586 (903)
T KOG1027|consen  511 FSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLEEF---FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCA  586 (903)
T ss_pred             eccHHHcccCCCCcEEEEEee-CCceehHHHHhhHh---HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhh
Confidence            45557899999885 899999 57899999986432   122334443       4788877653211        111 


Q ss_pred             HhhccccCCCccc--CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECC---C--CcEEEEecCcc
Q 006915          470 REMKTFSDPTLSA--LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQ---E--MNPKISDFGLA  537 (626)
Q Consensus       470 ~~~~~~~~~~l~~--~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~---~--~~~kl~DFGla  537 (626)
                      ..++.+......+  ...-...+.+..|+++||+|||+.+   ||||||||.||||+.   +  ..++|+|||++
T Consensus       587 ~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~---iVHRDLkPQNILI~~~~~~~~~ra~iSDfgls  658 (903)
T KOG1027|consen  587 CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLK---IVHRDLKPQNILISVPSADGTLRAKISDFGLS  658 (903)
T ss_pred             hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcc---cccccCCCceEEEEccCCCcceeEEecccccc
Confidence            1111111111000  0111233567899999999999987   999999999999975   3  56999999998

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.56  E-value=1.2e-14  Score=139.24  Aligned_cols=138  Identities=20%  Similarity=0.166  Sum_probs=93.7

Q ss_pred             HHHHhhcCccccccccccCeEEEEEEEcCCCcEEEEEEecCCCcc--c--------------------HHHHHHHHHh--
Q 006915          399 SILAATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQ--G--------------------LEEFKNEIET--  454 (626)
Q Consensus       399 ~l~~~~~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~--~--------------------~~~~~~e~~~--  454 (626)
                      ++......|.+.+.||+|+||.||++...+|+.||||+++.....  .                    ...+..|+..  
T Consensus         9 ~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   88 (198)
T cd05144           9 TLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALK   88 (198)
T ss_pred             HHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHH
Confidence            344444447778999999999999999888999999987643210  0                    0012223221  


Q ss_pred             ----c--cccceecchHHHHHHhhccccCCCcccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCc
Q 006915          455 ----S--NSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMN  528 (626)
Q Consensus       455 ----~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~  528 (626)
                          .  .+...+..  ...+..+++..+.++...........++.+++.++.++|+.+   |+||||||+||++++++.
T Consensus        89 ~l~~~~i~v~~~~~~--~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~i~~~l~~lh~~g---i~H~Dl~p~Nill~~~~~  163 (198)
T cd05144          89 ALYEEGFPVPKPIDW--NRHAVVMEYIDGVELYRVRVLEDPEEVLDEILEEIVKAYKHG---IIHGDLSEFNILVDDDEK  163 (198)
T ss_pred             HHHHcCCCCCceeec--CCceEEEEEeCCcchhhccccccHHHHHHHHHHHHHHHHHCC---CCcCCCCcccEEEcCCCc
Confidence                1  11111111  112345566666665554432445678999999999999987   999999999999999999


Q ss_pred             EEEEecCcchhcc
Q 006915          529 PKISDFGLALDMM  541 (626)
Q Consensus       529 ~kl~DFGla~~~~  541 (626)
                      ++|+|||++....
T Consensus       164 ~~liDfg~~~~~~  176 (198)
T cd05144         164 IYIIDWPQMVSTD  176 (198)
T ss_pred             EEEEECCccccCC
Confidence            9999999985443

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.56  E-value=2.8e-15  Score=149.38  Aligned_cols=130  Identities=23%  Similarity=0.247  Sum_probs=97.7

Q ss_pred             cCccccccccccCeEEEEEEEcCC-CcEEEEEEecCCCcccH---HHHHHHH------HhccccceecchHH--HHHHhh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFPG-GQQIAVKRLSSASGQGL---EEFKNEI------ETSNSNATIGANVK--AFVREM  472 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~~-~~~vAvK~l~~~~~~~~---~~~~~e~------~~~~~~~~~~~~~~--~~~~~~  472 (626)
                      +.|++.+.||.|.-|+||++++.+ +..+|+|++.+......   .+...|-      .|+-+..+.+....  .+...|
T Consensus        77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m  156 (459)
T KOG0610|consen   77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM  156 (459)
T ss_pred             HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence            456777899999999999999965 68999999986433222   2222222      22333333332211  333568


Q ss_pred             ccccCCCccc--------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          473 KTFSDPTLSA--------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       473 ~~~~~~~l~~--------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +|+.++++..        .++.....-++.+|+-||+|||-.|   ||.|||||+||||-++|.+-|+||.|+
T Consensus       157 eyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlG---ivYRDLKPENILvredGHIMLsDFDLS  226 (459)
T KOG0610|consen  157 EYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLG---IVYRDLKPENILVREDGHIMLSDFDLS  226 (459)
T ss_pred             ecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhc---eeeccCCcceeEEecCCcEEeeecccc
Confidence            8888887644        3567777789999999999999998   999999999999999999999999998

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.56  E-value=2e-15  Score=144.12  Aligned_cols=126  Identities=26%  Similarity=0.360  Sum_probs=96.5

Q ss_pred             hcCcccc-ccccccCeEEEEEEEcC-CCcEEEEEEecCCCcccHHHHHHHHHh-------ccccceecchHH------HH
Q 006915          404 TDNFSEA-NKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQGLEEFKNEIET-------SNSNATIGANVK------AF  468 (626)
Q Consensus       404 ~~~f~~~-~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~e~~~-------~~~~~~~~~~~~------~~  468 (626)
                      +++|++. ++||-|-.|.|-.+..+ +++.+|+|++...     ..-++|+++       +|+|.++...-.      -+
T Consensus        60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcL  134 (400)
T KOG0604|consen   60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKCL  134 (400)
T ss_pred             hhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCceee
Confidence            4556543 57999999999999874 5899999998642     234555554       777777654332      33


Q ss_pred             HHhhccccCCCccc--------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECC---CCcEEEEecCcc
Q 006915          469 VREMKTFSDPTLSA--------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQ---EMNPKISDFGLA  537 (626)
Q Consensus       469 ~~~~~~~~~~~l~~--------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~---~~~~kl~DFGla  537 (626)
                      +.+||.+.++.|..        .+.+++.-+|+.||+.|+.|||+.+   |.||||||+|+|...   |-.+||+|||+|
T Consensus       135 LiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~n---IAHRDlKpENLLyt~t~~na~lKLtDfGFA  211 (400)
T KOG0604|consen  135 LIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMN---IAHRDLKPENLLYTTTSPNAPLKLTDFGFA  211 (400)
T ss_pred             EeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcc---hhhccCChhheeeecCCCCcceEecccccc
Confidence            45667677766533        3667888899999999999999998   999999999999964   456999999999

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.55  E-value=1.2e-14  Score=143.21  Aligned_cols=118  Identities=33%  Similarity=0.391  Sum_probs=87.0

Q ss_pred             CeEEEEEEEcCC-CcEEEEEEecCCCccc-HHHHHHHHHh------ccccceecchHH--HHHHhhccccCCCcccC---
Q 006915          417 GFGPVYKAKFPG-GQQIAVKRLSSASGQG-LEEFKNEIET------SNSNATIGANVK--AFVREMKTFSDPTLSAL---  483 (626)
Q Consensus       417 ~fG~Vy~~~~~~-~~~vAvK~l~~~~~~~-~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~---  483 (626)
                      +||.||+|...+ ++.+|+|++....... ...+.+|++.      .+++.+.+.+..  .....+++...+++...   
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~   80 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK   80 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence            589999999864 8999999998654444 6777777765      333332222211  11122333444344332   


Q ss_pred             ---CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          484 ---LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       484 ---l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                         +++..+..++.+++.+|.|||..+   ++|+||+|+||++++++.++|+|||++
T Consensus        81 ~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~i~~~ni~~~~~~~~~l~d~~~~  134 (244)
T smart00220       81 RGRLSEDEARFYARQILSALEYLHSNG---IIHRDLKPENILLDEDGHVKLADFGLA  134 (244)
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHHcC---eecCCcCHHHeEECCCCcEEEccccce
Confidence               678889999999999999999997   999999999999999999999999987

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.54  E-value=3e-15  Score=144.21  Aligned_cols=133  Identities=27%  Similarity=0.299  Sum_probs=93.9

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCcccHHHHHHHHHh-ccccceecchHH----------HHHHh
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQGLEEFKNEIET-SNSNATIGANVK----------AFVRE  471 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~e~~~-~~~~~~~~~~~~----------~~~~~  471 (626)
                      .++|...++||+|.||+|-+++-+ .++.+|||++++.......+...-+.. +-+-...+..+.          .++.+
T Consensus       167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV  246 (516)
T KOG0690|consen  167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV  246 (516)
T ss_pred             cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence            457888899999999999999874 589999999986543333322221111 001111122221          22345


Q ss_pred             hccccCCCcccCCC------HHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchh
Q 006915          472 MKTFSDPTLSALLH------WEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALD  539 (626)
Q Consensus       472 ~~~~~~~~l~~~l~------~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~  539 (626)
                      |++..++.+.-.|+      .....-+-.+|..||.|||+++   ||.||||.+|.|||++|.+||+||||.++
T Consensus       247 MeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~---ivYRDlKLENLlLDkDGHIKitDFGLCKE  317 (516)
T KOG0690|consen  247 MEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRN---IVYRDLKLENLLLDKDGHIKITDFGLCKE  317 (516)
T ss_pred             EEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCC---eeeeechhhhheeccCCceEeeecccchh
Confidence            67777777766554      3333457889999999999998   99999999999999999999999999843

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.54  E-value=3e-15  Score=156.74  Aligned_cols=132  Identities=29%  Similarity=0.452  Sum_probs=105.8

Q ss_pred             hhcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCCcccHHHHH------HHHHhccccceecchHH--HHHHhhc
Q 006915          403 ATDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQGLEEFK------NEIETSNSNATIGANVK--AFVREMK  473 (626)
Q Consensus       403 ~~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~~~~~~~~------~e~~~~~~~~~~~~~~~--~~~~~~~  473 (626)
                      ..++|.....+|.|.||.|||++. ..++..|||.++-.......-.+      ++-.++|++.++|..+.  .++..|+
T Consensus        13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicME   92 (829)
T KOG0576|consen   13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICME   92 (829)
T ss_pred             CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEE
Confidence            346788889999999999999998 46899999999854333333333      34456788777776554  4456788


Q ss_pred             cccCCCcccC------CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          474 TFSDPTLSAL------LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       474 ~~~~~~l~~~------l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +..++++.+.      |+..+.....++.++||.|||+.+   -+|||||-.|||+++.+.+|++|||.+
T Consensus        93 ycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~g---k~hRdiKGanilltd~gDvklaDfgvs  159 (829)
T KOG0576|consen   93 YCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQG---KIHRDIKGANILLTDEGDVKLADFGVS  159 (829)
T ss_pred             ecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCC---cccccccccceeecccCceeecccCch
Confidence            8888877654      667777788999999999999998   899999999999999999999999998

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.52  E-value=3.5e-14  Score=140.30  Aligned_cols=130  Identities=22%  Similarity=0.257  Sum_probs=88.3

Q ss_pred             hcCccccccccccCeEEEEEEEcCC-CcEEEEEEecCCCcccHHHHHHHHHhc--------c----ccceec-------c
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFPG-GQQIAVKRLSSASGQGLEEFKNEIETS--------N----SNATIG-------A  463 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~~-~~~vAvK~l~~~~~~~~~~~~~e~~~~--------~----~~~~~~-------~  463 (626)
                      +++|.+...+|+|.||.|-++.... +..||||+++..... .+.-+-|++..        +    .+.+..       .
T Consensus        88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kY-reAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghi  166 (415)
T KOG0671|consen   88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKY-REAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHI  166 (415)
T ss_pred             ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHH-hhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCce
Confidence            6789999999999999999998743 789999999854322 22222333320        0    111110       1


Q ss_pred             hHH-HHHH-hhccccCCCcccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECC----------------
Q 006915          464 NVK-AFVR-EMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQ----------------  525 (626)
Q Consensus       464 ~~~-~~~~-~~~~~~~~~l~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~----------------  525 (626)
                      |+. .+++ +...+...+-...++......|+.|++++++|||+..   ++|-||||+|||+.+                
T Consensus       167 CivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~k---l~HTDLKPENILfvss~~~~~~~~k~~~~~~  243 (415)
T KOG0671|consen  167 CIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLK---LTHTDLKPENILFVSSEYFKTYNPKKKVCFI  243 (415)
T ss_pred             EEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcc---eeecCCChheEEEeccceEEEeccCCcccee
Confidence            111 1111 2222333344445678888999999999999999997   999999999999831                


Q ss_pred             ----CCcEEEEecCcc
Q 006915          526 ----EMNPKISDFGLA  537 (626)
Q Consensus       526 ----~~~~kl~DFGla  537 (626)
                          +..+||+|||.|
T Consensus       244 r~~ks~~I~vIDFGsA  259 (415)
T KOG0671|consen  244 RPLKSTAIKVIDFGSA  259 (415)
T ss_pred             ccCCCcceEEEecCCc
Confidence                234899999998

>smart00090 RIO RIO-like kinase

Probab=99.51  E-value=1.3e-13  Score=135.28  Aligned_cols=132  Identities=20%  Similarity=0.163  Sum_probs=89.9

Q ss_pred             CccccccccccCeEEEEEEE--cCCCcEEEEEEecCCCcc--c----------------------HHHHHHHHHhcc---
Q 006915          406 NFSEANKLGKGGFGPVYKAK--FPGGQQIAVKRLSSASGQ--G----------------------LEEFKNEIETSN---  456 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~--~~~~~~vAvK~l~~~~~~--~----------------------~~~~~~e~~~~~---  456 (626)
                      .|.+.+.||+|+||.||+|.  ..+|+.||||.++.....  .                      ...+..|++...   
T Consensus        29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~  108 (237)
T smart00090       29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY  108 (237)
T ss_pred             hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            47788999999999999998  467999999998743210  0                      011234443311   


Q ss_pred             -----ccceecchHHHHHHhhccccCCCcccC------CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECC
Q 006915          457 -----SNATIGANVKAFVREMKTFSDPTLSAL------LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQ  525 (626)
Q Consensus       457 -----~~~~~~~~~~~~~~~~~~~~~~~l~~~------l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~  525 (626)
                           ....+..  ...+.+++++.+..+...      +.......++.||+.+|.+||..+  .|+||||||+|||++ 
T Consensus       109 ~~~i~~p~~~~~--~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g--~iiH~Dikp~NIli~-  183 (237)
T smart00090      109 EAGVPVPKPIAW--RRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEG--ELVHGDLSEYNILVH-  183 (237)
T ss_pred             hcCCCCCeeeEe--cCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcC--CEEeCCCChhhEEEE-
Confidence                 1111111  112345565555443222      233445789999999999999886  499999999999999 


Q ss_pred             CCcEEEEecCcchhccc
Q 006915          526 EMNPKISDFGLALDMMD  542 (626)
Q Consensus       526 ~~~~kl~DFGla~~~~~  542 (626)
                      ++.++|+|||++...-.
T Consensus       184 ~~~i~LiDFg~a~~~~~  200 (237)
T smart00090      184 DGKVVIIDVSQSVELDH  200 (237)
T ss_pred             CCCEEEEEChhhhccCC
Confidence            88999999999865443

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.51  E-value=8.1e-15  Score=145.28  Aligned_cols=133  Identities=29%  Similarity=0.325  Sum_probs=97.0

Q ss_pred             cCccccccccccCeEEEEEEEcCC-CcEEEEEEecCCCcc---cHHHHHHHHHh------ccccceecchHH---HHHHh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFPG-GQQIAVKRLSSASGQ---GLEEFKNEIET------SNSNATIGANVK---AFVRE  471 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~~-~~~vAvK~l~~~~~~---~~~~~~~e~~~------~~~~~~~~~~~~---~~~~~  471 (626)
                      .+|....+||+|+||.|.++..++ .+.+|||++++....   ..+--..|-++      +..+.-++.|..   .++.+
T Consensus       349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV  428 (683)
T KOG0696|consen  349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV  428 (683)
T ss_pred             cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence            367888999999999999997754 678999999864321   11111222222      111111223332   45567


Q ss_pred             hccccCCCcccC------CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhc
Q 006915          472 MKTFSDPTLSAL------LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM  540 (626)
Q Consensus       472 ~~~~~~~~l~~~------l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~  540 (626)
                      |++..++++...      +.+....-+|.+||-||-+||+++   ||.||||..|||||.+|.+||+|||++++-
T Consensus       429 MEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kg---IiYRDLKLDNvmLd~eGHiKi~DFGmcKEn  500 (683)
T KOG0696|consen  429 MEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEN  500 (683)
T ss_pred             EEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCC---eeeeeccccceEeccCCceEeeeccccccc
Confidence            888888877543      445666779999999999999998   999999999999999999999999999543

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.49  E-value=6e-15  Score=149.84  Aligned_cols=137  Identities=25%  Similarity=0.266  Sum_probs=96.4

Q ss_pred             CccccccccccCeEEEEEEEcCCCc-EEEEEEecCCC---cccHHHHHHHHHh------ccccceecch--HHHHHHhhc
Q 006915          406 NFSEANKLGKGGFGPVYKAKFPGGQ-QIAVKRLSSAS---GQGLEEFKNEIET------SNSNATIGAN--VKAFVREMK  473 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~~~~-~vAvK~l~~~~---~~~~~~~~~e~~~------~~~~~~~~~~--~~~~~~~~~  473 (626)
                      +++....||-||||.|-+++..... .+|+|.+++..   ..+.+....|-.+      +-++++....  ...+++.|+
T Consensus       421 dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmE  500 (732)
T KOG0614|consen  421 DLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLME  500 (732)
T ss_pred             hhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHH
Confidence            4455678999999999999886533 48999887532   2233344444332      2333333211  113445667


Q ss_pred             cccCCCcccC------CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhcccccc
Q 006915          474 TFSDPTLSAL------LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKL  545 (626)
Q Consensus       474 ~~~~~~l~~~------l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~  545 (626)
                      .+.++.+-..      ++.....-++..+.+|++|||.++   ||.|||||+|+|||.+|.+||.|||+|+.+-..+-
T Consensus       501 aClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~---iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~K  575 (732)
T KOG0614|consen  501 ACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKG---IIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRK  575 (732)
T ss_pred             hhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcC---ceeccCChhheeeccCCceEEeehhhHHHhccCCc
Confidence            7777765443      445555668899999999999998   99999999999999999999999999977655543

>PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity

Probab=99.49  E-value=8e-15  Score=125.94  Aligned_cols=49  Identities=51%  Similarity=0.942  Sum_probs=37.7

Q ss_pred             CCcccEEEEeCCCCceEEeeCCCCCcccccCccccC----c--ceEEEccCCCCCC
Q 006915            1 MDSGNFVLQDDQVRKNLWESFKYPTDTFLAGMYMGE----N--LSLTSWAGHDDPK   50 (626)
Q Consensus         1 ldsGNlvl~~~~~~~~lWqSFd~PtDTllpgq~l~~----~--~~L~S~~s~~d~s   50 (626)
                      +|+|||||+|.. +.+|||||||||||+||+|+|+.    .  ..|+||++.+|||
T Consensus        60 ~~~GNlvl~d~~-~~~lW~Sf~~ptdt~L~~q~l~~~~~~~~~~~~~sw~s~~dps  114 (114)
T PF01453_consen   60 QDDGNLVLYDSS-GNVLWQSFDYPTDTLLPGQKLGDGNVTGKNDSLTSWSSNTDPS  114 (114)
T ss_dssp             ETTSEEEEEETT-SEEEEESTTSSS-EEEEEET--TSEEEEESTSSEEEESS----
T ss_pred             eCCCCEEEEeec-ceEEEeecCCCccEEEeccCcccCCCccccceEEeECCCCCCC
Confidence            489999999976 89999999999999999999886    3  2399999999997

Each bulb-type lectin domain consists of three sequential beta-sheet subdomains (I, II, III) that are inter-related by pseudo three-fold symmetry. The three subdomains are flat four-stranded, antiparrallel beta-sheets. Together they form a 12-stranded beta-barrel in which the barrel axis coincides with the pseudo 3-fold axis.; GO: 0005529 sugar binding; PDB: 3M7H_A 3M7J_B 3MEZ_D 1DLP_A 1BWU_D 1KJ1_A 1B2P_A 1XD6_A 2DPF_C 2D04_B ....

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.47  E-value=8.6e-14  Score=135.58  Aligned_cols=180  Identities=29%  Similarity=0.284  Sum_probs=122.3

Q ss_pred             ccccccccccCeEEEEEEEcCC-CcEEEEEEecCCCcc-cHHHHHHHHHh------ccccceecchHH--HHHHhhcccc
Q 006915          407 FSEANKLGKGGFGPVYKAKFPG-GQQIAVKRLSSASGQ-GLEEFKNEIET------SNSNATIGANVK--AFVREMKTFS  476 (626)
Q Consensus       407 f~~~~~lG~G~fG~Vy~~~~~~-~~~vAvK~l~~~~~~-~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~~~  476 (626)
                      |...+.||+|++|.||++...+ ++.+|||.+...... ..+.+.+|++.      .+++++++....  .....+++..
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE   80 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence            4556899999999999999865 889999999865443 45666666654      444444333221  1112233333


Q ss_pred             CCCcccC-------CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhccccc--cCC
Q 006915          477 DPTLSAL-------LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQK--LHA  547 (626)
Q Consensus       477 ~~~l~~~-------l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~--~~~  547 (626)
                      ++++...       +++.....++.+++.+|.|||..+   ++|+||+|.||+++.++.++|+|||++..+....  ...
T Consensus        81 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~  157 (225)
T smart00221       81 GGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLG---IVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLK  157 (225)
T ss_pred             CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeeCceeeEecCccccccc
Confidence            3333221       678888999999999999999987   9999999999999999999999999986665442  000


Q ss_pred             ---CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccccCCCCCCCcee
Q 006915          548 ---SSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAFV  598 (626)
Q Consensus       548 ---~~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~P~~~  598 (626)
                         ....-...++       +.  -..+++....+++|+.++.++.+++.|...
T Consensus       158 ~~~~~~~~~~pe~-------~~--~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~  202 (225)
T smart00221      158 TVKGTPFYLAPEV-------LL--GGKGYGEAVDIWSLGVILYELLWGPEPFSG  202 (225)
T ss_pred             ceeccCCcCCHhH-------hc--CCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence               0000000000       00  234456688899999888888888877643

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.45  E-value=1.7e-13  Score=130.04  Aligned_cols=129  Identities=22%  Similarity=0.231  Sum_probs=82.7

Q ss_pred             cccccccCeEEEEEEEcCCCcEEEEEEecCCCcc--cHHHHH--------------------HHHHhccccceecc----
Q 006915          410 ANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQ--GLEEFK--------------------NEIETSNSNATIGA----  463 (626)
Q Consensus       410 ~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~--~~~~~~--------------------~e~~~~~~~~~~~~----  463 (626)
                      .+.||+|+||.||+|...+++.||||+++.....  ....+.                    .+.++.++..+...    
T Consensus         2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~   81 (187)
T cd05119           2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV   81 (187)
T ss_pred             CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence            3689999999999999888999999998753211  111110                    00111100000000    


Q ss_pred             ----hHHHHHHhhccccCC-----CcccCCCHHHHHHHHHHHHHHHHHHHh-CCCCceEecCCCCCCeEECCCCcEEEEe
Q 006915          464 ----NVKAFVREMKTFSDP-----TLSALLHWEMRFNIIIGIARGLLYLHQ-DSRLRIIHRDLKTSNILLDQEMNPKISD  533 (626)
Q Consensus       464 ----~~~~~~~~~~~~~~~-----~l~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivHrDlkp~NILl~~~~~~kl~D  533 (626)
                          .....+..+++..++     .+...........++.+++.++.++|. .+   |+|+||||+||+++ ++.++|+|
T Consensus        82 ~~~~~~~~~~lv~e~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~lh~~~~---ivH~Dl~p~Nili~-~~~~~liD  157 (187)
T cd05119          82 PKPIDLNRHVLVMEFIGGDGIPAPRLKDVRLLEDPEELYDQILELMRKLYREAG---LVHGDLSEYNILVD-DGKVYIID  157 (187)
T ss_pred             CceEecCCCEEEEEEeCCCCccChhhhhhhhcccHHHHHHHHHHHHHHHhhccC---cCcCCCChhhEEEE-CCcEEEEE
Confidence                000112234444442     222211115567899999999999998 76   99999999999999 89999999


Q ss_pred             cCcchhccc
Q 006915          534 FGLALDMMD  542 (626)
Q Consensus       534 FGla~~~~~  542 (626)
                      ||.+....+
T Consensus       158 fg~a~~~~~  166 (187)
T cd05119         158 VPQAVEIDH  166 (187)
T ss_pred             CcccccccC
Confidence            999966655

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>PF08276 PAN_2: PAN-like domain; InterPro: IPR013227 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions []

Probab=99.43  E-value=1.8e-13  Score=105.04  Aligned_cols=64  Identities=39%  Similarity=0.793  Sum_probs=51.7

Q ss_pred             cCCCCceeEeeeeecCCCCCCC--CCCChHHHHHHhccCCCEEEEeeccccccCCCCCeEEeccccccc
Q 006915          209 CGGKDMFLKRQITKVGETDSCL--PVASEAECSKKCRGFCPCTAYSYKESKRRDEAGTCCIWIEELKDL  275 (626)
Q Consensus       209 c~~~~~f~~~~~~~~~~~~~~~--~~~s~~~C~~~Cl~~CsC~a~~y~~~~~~~~~~~C~~~~~~l~~~  275 (626)
                      |+.+|+|++++++++++.+...  ...++++|+.+||+||+|+||+|.+.   .++++|++|.++|.|+
T Consensus         1 C~~~d~F~~l~~~~~p~~~~~~~~~~~s~~~C~~~Cl~nCsC~Ayay~~~---~~~~~C~lW~~~L~d~   66 (66)
T PF08276_consen    1 CGSGDGFLKLPNMKLPDFDNAIVDSSVSLEECEKACLSNCSCTAYAYSNL---SGGGGCLLWYGDLVDL   66 (66)
T ss_pred             CcCCCEEEEECCeeCCCCcceeeecCCCHHHHHhhcCCCCCEeeEEeecc---CCCCEEEEEcCEeecC
Confidence            4457999999999994433233  56899999999999999999999742   1567899999999874

These domains contain a hair-pin loop like structure, similar to knottins, but the pattern of disulphide bonds differs

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.42  E-value=1.4e-12  Score=133.31  Aligned_cols=129  Identities=22%  Similarity=0.267  Sum_probs=83.5

Q ss_pred             hcCccccccccccCeEEEEEEEcCC-CcEEEEEEecCCCcccHHHHHHHHHhcccccee-----cchHH---------HH
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFPG-GQQIAVKRLSSASGQGLEEFKNEIETSNSNATI-----GANVK---------AF  468 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~~-~~~vAvK~l~~~~~~~~~~~~~e~~~~~~~~~~-----~~~~~---------~~  468 (626)
                      -..|.+....|+|-|+.|.+|.... |+.||||+|.... ...+.=+.|+++...+.-.     ..|+.         .+
T Consensus       431 D~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE-~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHL  509 (752)
T KOG0670|consen  431 DSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE-VMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHL  509 (752)
T ss_pred             cceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch-HHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhccee
Confidence            3568888889999999999998854 7899999998532 1122223333321110000     00111         00


Q ss_pred             HHhhccccCCCc---------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCC-CcEEEEecCcc
Q 006915          469 VREMKTFSDPTL---------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQE-MNPKISDFGLA  537 (626)
Q Consensus       469 ~~~~~~~~~~~l---------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~-~~~kl~DFGla  537 (626)
                      +.+++.+ ..+|         ..-|.......++.|+..||..|-..+   |+|.||||.|||+++. ..+||||||.|
T Consensus       510 ClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~---vlHaDIKPDNiLVNE~k~iLKLCDfGSA  584 (752)
T KOG0670|consen  510 CLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCG---VLHADIKPDNILVNESKNILKLCDFGSA  584 (752)
T ss_pred             EEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcC---eeecccCccceEeccCcceeeeccCccc
Confidence            0111110 0111         112556677789999999999999888   9999999999999876 45899999988

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.42  E-value=4.1e-13  Score=126.23  Aligned_cols=183  Identities=15%  Similarity=0.179  Sum_probs=111.3

Q ss_pred             ccccccccCeEEEEEEEcCCCcEEEEEEecCCCcc----cHHHHHHHHHhc-------cccceecchHHHHHHhhccccC
Q 006915          409 EANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQ----GLEEFKNEIETS-------NSNATIGANVKAFVREMKTFSD  477 (626)
Q Consensus       409 ~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~----~~~~~~~e~~~~-------~~~~~~~~~~~~~~~~~~~~~~  477 (626)
                      ....|++|+||+||.+.- ++..++.+.+.....-    ....|.+|++..       ++..++..  ......++++.+
T Consensus         6 ~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~--~~~~lvmeyI~G   82 (218)
T PRK12274          6 VNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW--DGRHLDRSYLAG   82 (218)
T ss_pred             cceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE--cCEEEEEeeecC
Confidence            347899999999997766 6788888887654321    112466776652       23333332  112344555556


Q ss_pred             CCcccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCC-CCCCeEECCCCcEEEEecCcchhccccccCCC--CChHHH
Q 006915          478 PTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDL-KTSNILLDQEMNPKISDFGLALDMMDQKLHAS--SKPNEI  554 (626)
Q Consensus       478 ~~l~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDl-kp~NILl~~~~~~kl~DFGla~~~~~~~~~~~--~~~~~~  554 (626)
                      ..+...+.. ....++.|++.+|.++|..+   |+|||| ||+|||++.++.++|+|||+|.. .++.....  ....++
T Consensus        83 ~~L~~~~~~-~~~~~~~qi~~~L~~lH~~G---IvHrDL~kp~NILv~~~g~i~LIDFG~A~~-~~~~~~~~r~L~~rDl  157 (218)
T PRK12274         83 AAMYQRPPR-GDLAYFRAARRLLQQLHRCG---VAHNDLAKEANWLVQEDGSPAVIDFQLAVR-GNPRARWMRLLAREDL  157 (218)
T ss_pred             ccHHhhhhh-hhHHHHHHHHHHHHHHHHCc---CccCCCCCcceEEEcCCCCEEEEECCCcee-cCCcchHHHHHHHHHH
Confidence            666544332 23568899999999999998   999999 79999999999999999999952 22111000  001111


Q ss_pred             HHHHHH-HHHhccc-CCC-----CCCC-HHHHHHHhccccccCCCCCCCceee
Q 006915          555 LKCINV-GLLCVQE-DPN-----DRPT-MSDVVIMLGSEAMNLATPKRPAFVI  599 (626)
Q Consensus       555 ~~~~~~-~~~C~~~-~p~-----~RPs-~~~vl~~L~~~~~~~~~~~~P~~~~  599 (626)
                      ..+++. -..|.+. +|.     .||+ ...+.-+.+..++...+...|....
T Consensus       158 ~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~  210 (218)
T PRK12274        158 RHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWED  210 (218)
T ss_pred             HHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcccc
Confidence            111111 1123322 222     3666 5566666666667777776665443

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.40  E-value=1.7e-13  Score=141.71  Aligned_cols=135  Identities=26%  Similarity=0.364  Sum_probs=90.5

Q ss_pred             CccccccccccCeEEEEEEEcCC--CcEEEEEEecCCCcccHHHHHHHHHh----------ccccceecchH--HHHHHh
Q 006915          406 NFSEANKLGKGGFGPVYKAKFPG--GQQIAVKRLSSASGQGLEEFKNEIET----------SNSNATIGANV--KAFVRE  471 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~~--~~~vAvK~l~~~~~~~~~~~~~e~~~----------~~~~~~~~~~~--~~~~~~  471 (626)
                      +|.+.++||+|+||.||++....  ...+|+|............+..|..+          .+...++....  ..+-..
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i   98 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI   98 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence            79999999999999999998754  35788888765322221133333322          12222322221  111111


Q ss_pred             hccccCCCc--------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCC-----CcEEEEecCcch
Q 006915          472 MKTFSDPTL--------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQE-----MNPKISDFGLAL  538 (626)
Q Consensus       472 ~~~~~~~~l--------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~-----~~~kl~DFGla~  538 (626)
                      +....+.++        ...++....+.|+.|++.+|++||+.+   ++||||||.|+++...     ..+.|.|||+++
T Consensus        99 VM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G---~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar  175 (322)
T KOG1164|consen   99 VMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKG---FIHRDIKPENFVVGQSSRSEVRTLYLLDFGLAR  175 (322)
T ss_pred             EEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcC---cccCCcCHHHeeecCCCCcccceEEEEecCCCc
Confidence            111222222        345778889999999999999999998   9999999999999765     469999999998


Q ss_pred             --hcccc
Q 006915          539 --DMMDQ  543 (626)
Q Consensus       539 --~~~~~  543 (626)
                        .+.+.
T Consensus       176 ~~~~~~~  182 (322)
T KOG1164|consen  176 RFKYVGD  182 (322)
T ss_pred             cccccCC
Confidence              54433

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.40  E-value=3.2e-13  Score=139.49  Aligned_cols=131  Identities=20%  Similarity=0.278  Sum_probs=91.0

Q ss_pred             cCccccccccccCeEEEEEEEcCC-CcEEEEEEecCCCc--------c------cHHHHHHHHH---hccccceecchHH
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFPG-GQQIAVKRLSSASG--------Q------GLEEFKNEIE---TSNSNATIGANVK  466 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~~-~~~vAvK~l~~~~~--------~------~~~~~~~e~~---~~~~~~~~~~~~~  466 (626)
                      ..|...+.||+|+||.|+.+.++. ...|+||.+.+..-        .      .+-+++.-++   +.|+++++...-.
T Consensus       561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd  640 (772)
T KOG1152|consen  561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED  640 (772)
T ss_pred             ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence            458889999999999999999854 67899999864210        1      1112222222   4566655543222


Q ss_pred             --HHHHhhcc-------ccCCCcccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          467 --AFVREMKT-------FSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       467 --~~~~~~~~-------~~~~~l~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                        .|+.+++.       |.--.+...+++.+..-|..||+.|+++||+.+   |||||||-+|+.++.+|-+||+|||.|
T Consensus       641 dd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~---ivhrdikdenvivd~~g~~klidfgsa  717 (772)
T KOG1152|consen  641 DDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQG---IVHRDIKDENVIVDSNGFVKLIDFGSA  717 (772)
T ss_pred             CCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccC---ceecccccccEEEecCCeEEEeeccch
Confidence              11111111       111122333567777889999999999999998   999999999999999999999999998


Q ss_pred             h
Q 006915          538 L  538 (626)
Q Consensus       538 ~  538 (626)
                      .
T Consensus       718 a  718 (772)
T KOG1152|consen  718 A  718 (772)
T ss_pred             h
Confidence            3

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.39  E-value=5.6e-13  Score=128.07  Aligned_cols=130  Identities=11%  Similarity=0.071  Sum_probs=93.1

Q ss_pred             hcCccccccccccCeEEEEEEEcCCCcEEEEEEecCCCcccHH---H------HHHHHH------hccccceecchHH--
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLE---E------FKNEIE------TSNSNATIGANVK--  466 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~---~------~~~e~~------~~~~~~~~~~~~~--  466 (626)
                      .++|...+.||.|+||.||+... ++..+|||.+.+.......   .      +.+|+.      ++++.........  
T Consensus        30 ~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~  108 (232)
T PRK10359         30 SYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAE  108 (232)
T ss_pred             hCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecc
Confidence            67899999999999999999766 5678999999754322222   1      345533      3444443333111  


Q ss_pred             --------HHHHhhccccCCCcccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcch
Q 006915          467 --------AFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLAL  538 (626)
Q Consensus       467 --------~~~~~~~~~~~~~l~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~  538 (626)
                              ..+..|++..+.++.+.....  .....+++.+|..||..+   ++|||+||+||+++.++ ++|+|||...
T Consensus       109 ~~~~~~~~~~~lvmEyi~G~tL~~~~~~~--~~~~~~i~~~l~~lH~~g---i~H~Dikp~Nili~~~g-i~liDfg~~~  182 (232)
T PRK10359        109 RKTLRYAHTYIMLIEYIEGVELNDMPEIS--EDVKAKIKASIESLHQHG---MVSGDPHKGNFIVSKNG-LRIIDLSGKR  182 (232)
T ss_pred             cccccccCCeEEEEEEECCccHHHhhhcc--HHHHHHHHHHHHHHHHcC---CccCCCChHHEEEeCCC-EEEEECCCcc
Confidence                    122356777777776653322  235679999999999998   99999999999999988 9999999885


Q ss_pred             hc
Q 006915          539 DM  540 (626)
Q Consensus       539 ~~  540 (626)
                      ..
T Consensus       183 ~~  184 (232)
T PRK10359        183 CT  184 (232)
T ss_pred             cc
Confidence            44

>PRK10345 hypothetical protein; Provisional

Probab=99.37  E-value=6.7e-13  Score=127.11  Aligned_cols=127  Identities=22%  Similarity=0.261  Sum_probs=82.7

Q ss_pred             ccccccccCeEEEEEEEcCCCcEEEEEEecCCCcccHHHHHHHHHh-----------ccccceecchHHH----H-H-Hh
Q 006915          409 EANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIET-----------SNSNATIGANVKA----F-V-RE  471 (626)
Q Consensus       409 ~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~e~~~-----------~~~~~~~~~~~~~----~-~-~~  471 (626)
                      ..+.||+|+||.||.  ++.....+||++........+.+.+|+..           ++++++.+.....    + + .+
T Consensus         6 ~~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I   83 (210)
T PRK10345          6 EQSPLGTGRHRKCYA--HPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVI   83 (210)
T ss_pred             CcceecCCCceEEEE--CCCCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEE
Confidence            347899999999996  54433347999876544455667777654           5555655433321    1 1 22


Q ss_pred             hcc--ccCCCcccCCCH---HHHHHHHHHHHHHH-HHHHhCCCCceEecCCCCCCeEECC----CCcEEEEecCcchhc
Q 006915          472 MKT--FSDPTLSALLHW---EMRFNIIIGIARGL-LYLHQDSRLRIIHRDLKTSNILLDQ----EMNPKISDFGLALDM  540 (626)
Q Consensus       472 ~~~--~~~~~l~~~l~~---~~~~~i~~~ia~gL-~yLH~~~~~~ivHrDlkp~NILl~~----~~~~kl~DFGla~~~  540 (626)
                      +++  ...+++.+++..   .....++.+++.++ +|||+++   |+||||||+|||++.    +..++|+||+.+..+
T Consensus        84 ~e~~G~~~~tL~~~l~~~~~~e~~~~~~~~L~~l~~yLh~~~---IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~~~~  159 (210)
T PRK10345         84 ADFDGKPSITLTEFAEQCRYEEDVAQLRQLLKKLKRYLLDNR---IVTMELKPQNILCQRISESEVIPVVCDNIGESTF  159 (210)
T ss_pred             ecCCCCcchhHHHHHHcccccHhHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEeccCCCCCcEEEEECCCCcce
Confidence            343  224555444421   11135678888888 9999998   999999999999974    347999996655444

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.37  E-value=4.2e-13  Score=129.87  Aligned_cols=184  Identities=21%  Similarity=0.264  Sum_probs=121.7

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCC---CcccHHHHHHHHHh----ccccceec--chHH---HHHH
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSA---SGQGLEEFKNEIET----SNSNATIG--ANVK---AFVR  470 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~---~~~~~~~~~~e~~~----~~~~~~~~--~~~~---~~~~  470 (626)
                      .++|.+.++||+|+|.+|.++++. ..+.+|+|++++.   ......-.+.|-.+    .|..-++|  .|..   .+..
T Consensus       249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff  328 (593)
T KOG0695|consen  249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF  328 (593)
T ss_pred             cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence            467889999999999999999985 5788999998752   22233333333222    33333332  2332   3345


Q ss_pred             hhccccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhccccc
Q 006915          471 EMKTFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQK  544 (626)
Q Consensus       471 ~~~~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~  544 (626)
                      +.++..++++.      ..|+.+...-+..+|.-||.|||+++   ||.||||..|+|||..|.+||+|+|+.++-+.+.
T Consensus       329 vieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rg---iiyrdlkldnvlldaeghikltdygmcke~l~~g  405 (593)
T KOG0695|consen  329 VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPG  405 (593)
T ss_pred             EEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcC---eeeeeccccceEEccCCceeecccchhhcCCCCC
Confidence            56777777653      34667777778899999999999998   9999999999999999999999999997655443


Q ss_pred             cCC-CC--ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccccCCCCCCCceee
Q 006915          545 LHA-SS--KPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAFVI  599 (626)
Q Consensus       545 ~~~-~~--~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~P~~~~  599 (626)
                      -.. .+  .+..         ...+.-..+...++-..+.|+..+.|+..++.|....
T Consensus       406 d~tstfcgtpny---------iapeilrgeeygfsvdwwalgvlmfemmagrspfdiv  454 (593)
T KOG0695|consen  406 DTTSTFCGTPNY---------IAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIV  454 (593)
T ss_pred             cccccccCCCcc---------cchhhhcccccCceehHHHHHHHHHHHHcCCCCccee
Confidence            211 10  0000         0111122444555666666666666666666665554

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.37  E-value=1.2e-12  Score=125.65  Aligned_cols=122  Identities=23%  Similarity=0.268  Sum_probs=83.7

Q ss_pred             cccccCeEEEEEEEcCCCcEEEEEEecCCCcc--------cHHHHHHHHHhccc--------cceecchHHHHHHhhccc
Q 006915          412 KLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQ--------GLEEFKNEIETSNS--------NATIGANVKAFVREMKTF  475 (626)
Q Consensus       412 ~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~--------~~~~~~~e~~~~~~--------~~~~~~~~~~~~~~~~~~  475 (626)
                      .||+|+||.||+|.+ ++..|+||........        ...++.+|++....        ...........+..++++
T Consensus         1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~   79 (199)
T TIGR03724         1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI   79 (199)
T ss_pred             CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence            489999999999996 5688999986542211        12344455544211        111111111223456666


Q ss_pred             cCCCcccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchh
Q 006915          476 SDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALD  539 (626)
Q Consensus       476 ~~~~l~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~  539 (626)
                      .+.++...+..... .++.+++.+|.+||+.+   ++|+|++|.|||++ ++.++|+|||++..
T Consensus        80 ~g~~l~~~~~~~~~-~~~~~i~~~l~~lH~~g---i~H~Dl~~~Nil~~-~~~~~liDfg~a~~  138 (199)
T TIGR03724        80 EGKPLKDVIEEGND-ELLREIGRLVGKLHKAG---IVHGDLTTSNIIVR-DDKLYLIDFGLGKY  138 (199)
T ss_pred             CCccHHHHHhhcHH-HHHHHHHHHHHHHHHCC---eecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence            66666554432222 78999999999999998   99999999999999 88999999999843

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.35  E-value=4.4e-13  Score=134.32  Aligned_cols=134  Identities=28%  Similarity=0.364  Sum_probs=98.7

Q ss_pred             HHHhhcCccccccccccCeEEEEEEEcC----CCcEEEEEEecCCCcccHHHHHHHHHh-------ccccceecchHH--
Q 006915          400 ILAATDNFSEANKLGKGGFGPVYKAKFP----GGQQIAVKRLSSASGQGLEEFKNEIET-------SNSNATIGANVK--  466 (626)
Q Consensus       400 l~~~~~~f~~~~~lG~G~fG~Vy~~~~~----~~~~vAvK~l~~~~~~~~~~~~~e~~~-------~~~~~~~~~~~~--  466 (626)
                      +....+.|...++||+|.|++||++.+.    ..+.||+|.+...+.  ...+.+|++.       .|++.+.++...  
T Consensus        31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~--p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd  108 (418)
T KOG1167|consen   31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS--PSRILNELEMLYRLGGSDNIIKLNGCFRNND  108 (418)
T ss_pred             hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC--chHHHHHHHHHHHhccchhhhcchhhhccCC
Confidence            3445667888999999999999999873    467899999986543  2345566554       333333332211  


Q ss_pred             HHHHhhccccCCC---cccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCC-CcEEEEecCcch
Q 006915          467 AFVREMKTFSDPT---LSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQE-MNPKISDFGLAL  538 (626)
Q Consensus       467 ~~~~~~~~~~~~~---l~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~-~~~kl~DFGla~  538 (626)
                      ....+++++.+..   +..-++......++..+..||.++|.+|   ||||||||+|+|.+.. +.-.|.|||||.
T Consensus       109 ~v~ivlp~~~H~~f~~l~~~l~~~~i~~Yl~~ll~Al~~~h~~G---IvHRDiKpsNFL~n~~t~rg~LvDFgLA~  181 (418)
T KOG1167|consen  109 QVAIVLPYFEHDRFRDLYRSLSLAEIRWYLRNLLKALAHLHKNG---IVHRDIKPSNFLYNRRTQRGVLVDFGLAQ  181 (418)
T ss_pred             eeEEEecccCccCHHHHHhcCCHHHHHHHHHHHHHHhhhhhccC---ccccCCCccccccccccCCceEEechhHH
Confidence            3334566666544   3334678888889999999999999998   9999999999999754 668899999995

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.35  E-value=1.9e-12  Score=125.41  Aligned_cols=124  Identities=24%  Similarity=0.278  Sum_probs=85.3

Q ss_pred             ccccccCeEEEEEEEcCCCcEEEEEEecCCCcc--------cHHHHHHHHHh------ccccc--eecchHHHHHHhhcc
Q 006915          411 NKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQ--------GLEEFKNEIET------SNSNA--TIGANVKAFVREMKT  474 (626)
Q Consensus       411 ~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~--------~~~~~~~e~~~------~~~~~--~~~~~~~~~~~~~~~  474 (626)
                      +.||+|++|.||+|.. .+..|+||........        ....+.+|++.      .++..  .........+..+++
T Consensus         2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~   80 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY   80 (211)
T ss_pred             cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence            5799999999999987 6778999986643211        11234455443      22211  111111222344566


Q ss_pred             ccCCCcccCCCH--HHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchh
Q 006915          475 FSDPTLSALLHW--EMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALD  539 (626)
Q Consensus       475 ~~~~~l~~~l~~--~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~  539 (626)
                      +.+.++...+..  ..+..++.+++.+|.+||+.+   ++|+|++|.|||++ ++.++|+|||++..
T Consensus        81 ~~G~~L~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~Dl~p~Nil~~-~~~~~liDf~~a~~  143 (211)
T PRK14879         81 IEGEPLKDLINSNGMEELELSREIGRLVGKLHSAG---IIHGDLTTSNMILS-GGKIYLIDFGLAEF  143 (211)
T ss_pred             eCCcCHHHHHHhccHHHHHHHHHHHHHHHHHHhCC---cccCCCCcccEEEE-CCCEEEEECCcccC
Confidence            666666544321  156789999999999999998   99999999999999 78899999999843

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.34  E-value=8.8e-13  Score=145.70  Aligned_cols=129  Identities=20%  Similarity=0.271  Sum_probs=87.6

Q ss_pred             hcCccccccccccCeEEEEEEEcCCCcEEEEEE-ecCCCc-------ccHHHHHHHHHhccccceec------chH--HH
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKR-LSSASG-------QGLEEFKNEIETSNSNATIG------ANV--KA  467 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~-l~~~~~-------~~~~~~~~e~~~~~~~~~~~------~~~--~~  467 (626)
                      ...|...+.||+|+||.||+|.+.+.. +++|+ +.+...       ...+.+.+|++....++..+      ...  ..
T Consensus       332 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~  410 (535)
T PRK09605        332 KRRKIPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEE  410 (535)
T ss_pred             ccccCccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCC
Confidence            334556789999999999999885543 44443 222111       11245666765532222111      111  12


Q ss_pred             HHHhhccccCCCcccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchh
Q 006915          468 FVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALD  539 (626)
Q Consensus       468 ~~~~~~~~~~~~l~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~  539 (626)
                      .+..+++..++++...+.  .+..++.+++.+|.|||+.+   ++||||||+|||+ +++.++|+|||+++.
T Consensus       411 ~~lv~E~~~g~~L~~~l~--~~~~~~~~i~~~L~~lH~~g---iiHrDlkp~NILl-~~~~~~liDFGla~~  476 (535)
T PRK09605        411 KTIVMEYIGGKDLKDVLE--GNPELVRKVGEIVAKLHKAG---IVHGDLTTSNFIV-RDDRLYLIDFGLGKY  476 (535)
T ss_pred             CEEEEEecCCCcHHHHHH--HHHHHHHHHHHHHHHHHhCC---CccCCCChHHEEE-ECCcEEEEeCccccc
Confidence            335567777777765543  46779999999999999998   9999999999999 678999999999954

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.28  E-value=1.1e-11  Score=139.63  Aligned_cols=137  Identities=21%  Similarity=0.257  Sum_probs=92.8

Q ss_pred             HHHhhcCccccccccccCeEEEEEEEcCCCcEEEEEEecCCCcc---cHHHHHHHHHhccccceecchHH-----HHHHh
Q 006915          400 ILAATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQ---GLEEFKNEIETSNSNATIGANVK-----AFVRE  471 (626)
Q Consensus       400 l~~~~~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~---~~~~~~~e~~~~~~~~~~~~~~~-----~~~~~  471 (626)
                      .....+.|.+.++||+|+||+||+|...+|+.||+|.-+....-   .-.+++..++..-+..+++.+..     .-+.+
T Consensus       693 ~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv  772 (974)
T KOG1166|consen  693 FEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWEFYICLQVMERLKPQMLPSIMHISSAHVFQNASVLV  772 (974)
T ss_pred             eeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCceeeeehHHHHHhhchhhhcchHHHHHHHccCCcceee
Confidence            34455678889999999999999999988999999997654321   11222222221001111111111     11123


Q ss_pred             hccccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEEC-------CCCcEEEEecCcch
Q 006915          472 MKTFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLD-------QEMNPKISDFGLAL  538 (626)
Q Consensus       472 ~~~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~-------~~~~~kl~DFGla~  538 (626)
                      .++...+++.      +.++|...+.++.|+++-+++||..+   |||+||||+|.||.       +...++|+|||.+.
T Consensus       773 ~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~---IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~si  849 (974)
T KOG1166|consen  773 SEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMG---IIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSI  849 (974)
T ss_pred             eeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcc---eecccCCcceeEeecccCCCCcccceEEEecccce
Confidence            4444445443      34678888999999999999999998   99999999999993       34558999999994


Q ss_pred             h
Q 006915          539 D  539 (626)
Q Consensus       539 ~  539 (626)
                      +
T Consensus       850 D  850 (974)
T KOG1166|consen  850 D  850 (974)
T ss_pred             e
Confidence            3

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.25  E-value=4.5e-12  Score=128.89  Aligned_cols=120  Identities=26%  Similarity=0.267  Sum_probs=80.9

Q ss_pred             hcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCCcccHHHHHHHHHh--------------ccccceecc-----
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQGLEEFKNEIET--------------SNSNATIGA-----  463 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~~~~~~~~~e~~~--------------~~~~~~~~~-----  463 (626)
                      .++|.+.++||.|-|++||++.. ...+.||+|+.+... ...+.-..||++              ..+|+++..     
T Consensus        77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq-hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG  155 (590)
T KOG1290|consen   77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ-HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG  155 (590)
T ss_pred             CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh-HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence            36789999999999999999987 457899999998532 222333344443              223444321     


Q ss_pred             -hHHHHHHhhcccc-------CCCcccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCC
Q 006915          464 -NVKAFVREMKTFS-------DPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQE  526 (626)
Q Consensus       464 -~~~~~~~~~~~~~-------~~~l~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~  526 (626)
                       +-..+++++|.+.       .....+-|+...+.+|+.||+.||.|||.++  .|||-||||+||||..+
T Consensus       156 pNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~~~  224 (590)
T KOG1290|consen  156 PNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLCST  224 (590)
T ss_pred             CCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeeecc
Confidence             1111112222111       1122334778888999999999999999987  69999999999999544

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.25  E-value=1.9e-11  Score=118.47  Aligned_cols=127  Identities=28%  Similarity=0.356  Sum_probs=86.3

Q ss_pred             CccccccccccCeEEEEEEEcC-CCcEEEEEEecCC--CcccHHHHHHH------HHhccccceecchHH--------HH
Q 006915          406 NFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSA--SGQGLEEFKNE------IETSNSNATIGANVK--------AF  468 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~--~~~~~~~~~~e------~~~~~~~~~~~~~~~--------~~  468 (626)
                      +|.-.+.+|.|.- .|-.+... .++.||+|++...  ..+..+.-.+|      +.++|++.+......        .+
T Consensus        18 Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~   96 (369)
T KOG0665|consen   18 RYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEV   96 (369)
T ss_pred             eeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhH
Confidence            4555577888877 55555432 4789999998632  22233333344      344777766643221        23


Q ss_pred             HHhhccccCCCcc----cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          469 VREMKTFSDPTLS----ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       469 ~~~~~~~~~~~l~----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +.+++++.. ++.    --++-.....|..|++.|+.|||+.+   |+||||||+||++..+..+||.|||+|
T Consensus        97 y~v~e~m~~-nl~~vi~~elDH~tis~i~yq~~~~ik~lhs~~---IihRdLkPsnivv~~~~~lKi~dfg~a  165 (369)
T KOG0665|consen   97 YLVMELMDA-NLCQVILMELDHETISYILYQMLCGIKHLHSAG---IIHRDLKPSNIVVNSDCTLKILDFGLA  165 (369)
T ss_pred             HHHHHhhhh-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHhcc---eeecccCcccceecchhheeeccchhh
Confidence            334443321 221    22455666789999999999999998   999999999999999999999999998

>cd00129 PAN_APPLE PAN/APPLE-like domain; present in N-terminal (N) domains of plasminogen/ hepatocyte growth factor proteins, plasma prekallikrein/coagulation factor XI and microneme antigen proteins, plant receptor-like protein kinases, and various nematode and leech anti-platelet proteins

Probab=99.24  E-value=1.4e-11  Score=97.62  Aligned_cols=72  Identities=18%  Similarity=0.384  Sum_probs=59.8

Q ss_pred             cCCCCceeEeeeeecCCCCCCCCCCChHHHHHHhcc---CCCEEEEeeccccccCCCCCeEEecccc-ccccccccCCCc
Q 006915          209 CGGKDMFLKRQITKVGETDSCLPVASEAECSKKCRG---FCPCTAYSYKESKRRDEAGTCCIWIEEL-KDLREDFSNGGH  284 (626)
Q Consensus       209 c~~~~~f~~~~~~~~~~~~~~~~~~s~~~C~~~Cl~---~CsC~a~~y~~~~~~~~~~~C~~~~~~l-~~~~~~~~~~~~  284 (626)
                      |..+.+|+.+.++++  |++..  .+.++|++.|++   ||+|.||+|.+     .+++|.+|.++| .+++ .+.+++.
T Consensus         5 ~~~~g~fl~~~~~kl--pd~~~--~s~~eC~~~Cl~~~~nCsC~Aya~~~-----~~~gC~~W~~~l~~d~~-~~~~~g~   74 (80)
T cd00129           5 CKSAGTTLIKIALKI--KTTKA--NTADECANRCEKNGLPFSCKAFVFAK-----ARKQCLWFPFNSMSGVR-KEFSHGF   74 (80)
T ss_pred             eecCCeEEEeecccC--Ccccc--cCHHHHHHHHhcCCCCCCceeeeccC-----CCCCeEEecCcchhhHH-hccCCCc
Confidence            344678999999998  66533  789999999999   99999999973     346899999999 9988 6667789


Q ss_pred             eEEEEe
Q 006915          285 ELYIRV  290 (626)
Q Consensus       285 ~~~lrv  290 (626)
                      ++|+|.
T Consensus        75 ~Ly~r~   80 (80)
T cd00129          75 DLYENK   80 (80)
T ss_pred             eeEeEC
Confidence            999983

Common structural features include two disulfide bonds that link the alpha-helix to the central region of the protein. PAN domains have significant functional versatility, fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions.

>cd01098 PAN_AP_plant Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins

Probab=99.24  E-value=1.7e-11  Score=99.81  Aligned_cols=71  Identities=41%  Similarity=0.799  Sum_probs=58.3

Q ss_pred             CceeEeeeeecCCCCCCC--CCCChHHHHHHhccCCCEEEEeeccccccCCCCCeEEeccccccccccccCCCceEEEEe
Q 006915          213 DMFLKRQITKVGETDSCL--PVASEAECSKKCRGFCPCTAYSYKESKRRDEAGTCCIWIEELKDLREDFSNGGHELYIRV  290 (626)
Q Consensus       213 ~~f~~~~~~~~~~~~~~~--~~~s~~~C~~~Cl~~CsC~a~~y~~~~~~~~~~~C~~~~~~l~~~~~~~~~~~~~~~lrv  290 (626)
                      ++|+.+.++++  |++..  ..+++++|+++||+||+|+||+|.     +++++|++|..++.+.+ .....+..+||||
T Consensus        12 ~~f~~~~~~~~--~~~~~~~~~~s~~~C~~~Cl~nCsC~a~~~~-----~~~~~C~~~~~~~~~~~-~~~~~~~~~yiKv   83 (84)
T cd01098          12 DGFLKLPDVKL--PDNASAITAISLEECREACLSNCSCTAYAYN-----NGSGGCLLWNGLLNNLR-SLSSGGGTLYLRL   83 (84)
T ss_pred             CEEEEeCCeeC--CCchhhhccCCHHHHHHHHhcCCCcceeeec-----CCCCeEEEEeceecceE-eecCCCcEEEEEe
Confidence            68999999999  55433  567899999999999999999997     34678999999998877 3344468999998


Q ss_pred             c
Q 006915          291 A  291 (626)
Q Consensus       291 ~  291 (626)
                      +
T Consensus        84 ~   84 (84)
T cd01098          84 A   84 (84)
T ss_pred             C
Confidence            4

PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. S-receptor protein kinases and S-locus glycoproteins are involved in sporophytic self-incompatibility response in Brassica, one of probably many molecular mechanisms, by which hermaphrodite flowering plants avoid self-fertilization.

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.24  E-value=3.8e-11  Score=109.05  Aligned_cols=125  Identities=22%  Similarity=0.138  Sum_probs=89.9

Q ss_pred             cccccccCeEEEEEEEcCCCcEEEEEEecCCCcccHHHHHHHHHh------c--cccceecchHH--HHHHhhccccCCC
Q 006915          410 ANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIET------S--NSNATIGANVK--AFVREMKTFSDPT  479 (626)
Q Consensus       410 ~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~e~~~------~--~~~~~~~~~~~--~~~~~~~~~~~~~  479 (626)
                      .+.||+|.++.||++...+ ..++||.......  ...+..|+..      .  .+..++.....  ..+..++++.+..
T Consensus         3 ~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~   79 (155)
T cd05120           3 IKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGET   79 (155)
T ss_pred             ceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCee
Confidence            4789999999999999854 7899999875432  3344444443      1  23333322211  2334455555544


Q ss_pred             cccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcch
Q 006915          480 LSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLAL  538 (626)
Q Consensus       480 l~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~  538 (626)
                      +... +......++.+++++|++||......++|+|++|+|||+++.+.++++|||++.
T Consensus        80 ~~~~-~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~  137 (155)
T cd05120          80 LDEV-SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAG  137 (155)
T ss_pred             cccC-CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEeccccc
Confidence            4433 667778899999999999998755569999999999999998999999999883

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.17  E-value=6.9e-11  Score=126.43  Aligned_cols=127  Identities=20%  Similarity=0.258  Sum_probs=80.7

Q ss_pred             ccccccCeEEEEEEEcCCCcEEEEEEecCCCcccHH----------------------------------------HHHH
Q 006915          411 NKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLE----------------------------------------EFKN  450 (626)
Q Consensus       411 ~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~----------------------------------------~~~~  450 (626)
                      +.||.|++|+||+|++.+|+.||||+.++.......                                        +|.+
T Consensus       123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~  202 (437)
T TIGR01982       123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR  202 (437)
T ss_pred             cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence            679999999999999999999999998754211110                                        0111


Q ss_pred             HHHhc----------cccceecch---HHHHHHhhccccCCCcccCCCHH----HHHHHHHHHHH-HHHHHHhCCCCceE
Q 006915          451 EIETS----------NSNATIGAN---VKAFVREMKTFSDPTLSALLHWE----MRFNIIIGIAR-GLLYLHQDSRLRII  512 (626)
Q Consensus       451 e~~~~----------~~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~~----~~~~i~~~ia~-gL~yLH~~~~~~iv  512 (626)
                      |....          +.+.+....   ...-+..|+++.+..+.+.....    .+..++..++. .+..+|..+   ++
T Consensus       203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~ia~~~~~~~l~ql~~~g---~~  279 (437)
T TIGR01982       203 EAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLDRKALAENLARSFLNQVLRDG---FF  279 (437)
T ss_pred             HHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCCHHHHHHHHHHHHHHHHHhCC---ce
Confidence            11100          000000000   00112345555555554433211    23457777766 478889887   99


Q ss_pred             ecCCCCCCeEECCCCcEEEEecCcchhc
Q 006915          513 HRDLKTSNILLDQEMNPKISDFGLALDM  540 (626)
Q Consensus       513 HrDlkp~NILl~~~~~~kl~DFGla~~~  540 (626)
                      |+|+||.||++++++.++|.|||++..+
T Consensus       280 H~D~hPgNilv~~~g~i~liDfG~~~~l  307 (437)
T TIGR01982       280 HADLHPGNIFVLKDGKIIALDFGIVGRL  307 (437)
T ss_pred             eCCCCcccEEECCCCcEEEEeCCCeeEC
Confidence            9999999999999999999999998443

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.13  E-value=5.3e-11  Score=138.12  Aligned_cols=53  Identities=13%  Similarity=0.192  Sum_probs=45.9

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECC-------------------CCcEEEEecCcch
Q 006915          483 LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQ-------------------EMNPKISDFGLAL  538 (626)
Q Consensus       483 ~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~-------------------~~~~kl~DFGla~  538 (626)
                      .+++.+++.++.||++||.|||+++   |+||||||+||||+.                   ++.+||+|||+++
T Consensus        76 ~~~~~~~~~i~~qi~~al~~lH~~g---IvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~  147 (793)
T PLN00181         76 SVDAFECFHVFRQIVEIVNAAHSQG---IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSR  147 (793)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHhCC---eeeccCCchhEEEcccCcEEEeeccccCcccccccCccccccccccc
Confidence            3778889999999999999999998   999999999999954                   4567788888764

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.08  E-value=9.6e-11  Score=115.24  Aligned_cols=125  Identities=22%  Similarity=0.237  Sum_probs=78.5

Q ss_pred             cccc-ccCeEEEEEEEcCCCcEEEEEEecCCC-------------cccHHHHHHHHHhc------cc--cceecchHH--
Q 006915          411 NKLG-KGGFGPVYKAKFPGGQQIAVKRLSSAS-------------GQGLEEFKNEIETS------NS--NATIGANVK--  466 (626)
Q Consensus       411 ~~lG-~G~fG~Vy~~~~~~~~~vAvK~l~~~~-------------~~~~~~~~~e~~~~------~~--~~~~~~~~~--  466 (626)
                      ..|| .||.|+||++... +..++||.+....             ......+.+|++..      ++  +..++....  
T Consensus        37 ~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~  115 (239)
T PRK01723         37 RVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH  115 (239)
T ss_pred             ceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence            4687 8899999999884 6789999875311             01223455565542      21  222221111  


Q ss_pred             -HH---HHhhccccC-CCcccCCCH-HHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchh
Q 006915          467 -AF---VREMKTFSD-PTLSALLHW-EMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALD  539 (626)
Q Consensus       467 -~~---~~~~~~~~~-~~l~~~l~~-~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~  539 (626)
                       ..   ...+++..+ .++...+.. ......+.+|+.+|.+||+.+   |+||||||.|||++.++.++|+|||.+..
T Consensus       116 ~~~~~~~lV~e~l~G~~~L~~~l~~~~l~~~~~~~i~~~l~~lH~~G---I~HrDlkp~NILv~~~~~v~LIDfg~~~~  191 (239)
T PRK01723        116 GLFYRADILIERIEGARDLVALLQEAPLSEEQWQAIGQLIARFHDAG---VYHADLNAHNILLDPDGKFWLIDFDRGEL  191 (239)
T ss_pred             CcceeeeEEEEecCCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHCC---CCCCCCCchhEEEcCCCCEEEEECCCccc
Confidence             00   122343433 233322210 001234678999999999998   99999999999999989999999999854

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=98.94  E-value=1.6e-10  Score=109.39  Aligned_cols=174  Identities=21%  Similarity=0.350  Sum_probs=119.3

Q ss_pred             cccccccCeEEEEEEEcCCCcEEEEEEecCC--CcccHHHHHHHH------HhccccceecchHH--HHHHhhccccCCC
Q 006915          410 ANKLGKGGFGPVYKAKFPGGQQIAVKRLSSA--SGQGLEEFKNEI------ETSNSNATIGANVK--AFVREMKTFSDPT  479 (626)
Q Consensus       410 ~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~--~~~~~~~~~~e~------~~~~~~~~~~~~~~--~~~~~~~~~~~~~  479 (626)
                      ..+|.+...|+.|+|++. |..+++|+++..  ......+|..|.      .++|+..+++.|..  .++....+++.++
T Consensus       195 ~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gs  273 (448)
T KOG0195|consen  195 ITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGS  273 (448)
T ss_pred             hhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchH
Confidence            357889999999999995 455666777532  223334566663      35777777776654  2333333444444


Q ss_pred             cccC--------CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEE--ecCcc------------
Q 006915          480 LSAL--------LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKIS--DFGLA------------  537 (626)
Q Consensus       480 l~~~--------l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~--DFGla------------  537 (626)
                      +...        ++..+..+++.+||+|++|||+.. +-|..--|.+..++||++.+++|+  |--++            
T Consensus       274 lynvlhe~t~vvvd~sqav~faldiargmaflhsle-p~ipr~~lns~hvmidedltarismad~kfsfqe~gr~y~paw  352 (448)
T KOG0195|consen  274 LYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLE-PMIPRFYLNSKHVMIDEDLTARISMADTKFSFQEVGRAYSPAW  352 (448)
T ss_pred             HHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcc-hhhhhhhcccceEEecchhhhheecccceeeeeccccccCccc
Confidence            4333        456788999999999999999986 334455788999999999988775  32222            


Q ss_pred             ----------------------------------------------hhccccccCCCCChHHHHHHHHHHHHhcccCCCC
Q 006915          538 ----------------------------------------------LDMMDQKLHASSKPNEILKCINVGLLCVQEDPND  571 (626)
Q Consensus       538 ----------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~p~~  571 (626)
                                                                    .++.-+.+....++.....+.+++..|..+||.+
T Consensus       353 mspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialeglrv~ippgis~hm~klm~icmnedpgk  432 (448)
T KOG0195|consen  353 MSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEGLRVHIPPGISRHMNKLMNICMNEDPGK  432 (448)
T ss_pred             CCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhccccccCCCCccHHHHHHHHHHhcCCCCc
Confidence                                                          0111122333445556667788888999999999


Q ss_pred             CCCHHHHHHHhccc
Q 006915          572 RPTMSDVVIMLGSE  585 (626)
Q Consensus       572 RPs~~~vl~~L~~~  585 (626)
                      ||.+..++-.|+.+
T Consensus       433 rpkfdmivpilekm  446 (448)
T KOG0195|consen  433 RPKFDMIVPILEKM  446 (448)
T ss_pred             CCCcceehhhHHHh
Confidence            99999999999875

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=98.91  E-value=2.3e-09  Score=106.36  Aligned_cols=186  Identities=22%  Similarity=0.295  Sum_probs=107.2

Q ss_pred             ccccccccccCeEEEEEEEcC-CCcEEEEEEecCC---CcccHHHHHHHHHhccc-cceecchHH-HHHHh---hcc---
Q 006915          407 FSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSA---SGQGLEEFKNEIETSNS-NATIGANVK-AFVRE---MKT---  474 (626)
Q Consensus       407 f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~---~~~~~~~~~~e~~~~~~-~~~~~~~~~-~~~~~---~~~---  474 (626)
                      +...+.||.|+|+.||.+++. +++.+|||.....   .....+++++|.-.... ......... .....   ++.   
T Consensus        14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i   93 (288)
T PF14531_consen   14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI   93 (288)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred             EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence            455689999999999999985 4899999997532   22345666666533211 110000000 00000   000   


Q ss_pred             ------------------------cc--CCCcc-------------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecC
Q 006915          475 ------------------------FS--DPTLS-------------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRD  515 (626)
Q Consensus       475 ------------------------~~--~~~l~-------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrD  515 (626)
                                              ++  ..++.             ..+....++.+..|+++-+++||+.+   ++|+|
T Consensus        94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~G---lVHgd  170 (288)
T PF14531_consen   94 PGKPPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYG---LVHGD  170 (288)
T ss_dssp             TTS-SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---EEEST
T ss_pred             cCCCcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcc---eEecc
Confidence                                    00  01111             11223445678899999999999998   99999


Q ss_pred             CCCCCeEECCCCcEEEEecCcchhccc----cccCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccccCCC
Q 006915          516 LKTSNILLDQEMNPKISDFGLALDMMD----QKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLAT  591 (626)
Q Consensus       516 lkp~NILl~~~~~~kl~DFGla~~~~~----~~~~~~~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~~~~~~  591 (626)
                      |||+|++++.+|.++|+||+.....-+    ......+.+++.......    ... +.-..|.+.+.++|+.+++.+-.
T Consensus       171 i~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~----~~~-~~~~~t~~~DaW~LG~~ly~lWC  245 (288)
T PF14531_consen  171 IKPENFLLDQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQ----FGQ-NNAPYTFATDAWQLGITLYSLWC  245 (288)
T ss_dssp             -SGGGEEE-TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTS----CHH-SEEEE-HHHHHHHHHHHHHHHHH
T ss_pred             cceeeEEEcCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcc----cCc-ccceeeeccCHHHHHHHHHHHHH
Confidence            999999999999999999987732211    233333444444332210    111 33445888899999998888887


Q ss_pred             CCCCceeee
Q 006915          592 PKRPAFVIR  600 (626)
Q Consensus       592 ~~~P~~~~~  600 (626)
                      ...|.....
T Consensus       246 ~~lPf~~~~  254 (288)
T PF14531_consen  246 GRLPFGLSS  254 (288)
T ss_dssp             SS-STCCCG
T ss_pred             ccCCCCCCC
Confidence            777765543

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=98.89  E-value=3.6e-09  Score=116.97  Aligned_cols=52  Identities=37%  Similarity=0.428  Sum_probs=48.0

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          483 LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       483 ~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      .+...++-.++.|+..|+.|||+.+   |.|||||++|+|+..++.+||+|||.+
T Consensus       416 ~~~~~e~~c~fKqL~~Gv~y~h~~G---iahrdlK~enll~~~~g~lki~Dfg~~  467 (601)
T KOG0590|consen  416 KLTPLEADCFFKQLLRGVKYLHSMG---LAHRDLKLENLLVTENGILKIIDFGAA  467 (601)
T ss_pred             ccchhhhhHHHHHHHHHHHHHHhcC---ceeccCccccEEEecCCceEEeecCcc
Confidence            4556667779999999999999998   999999999999999999999999988

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=98.89  E-value=3.1e-09  Score=118.23  Aligned_cols=128  Identities=22%  Similarity=0.217  Sum_probs=88.0

Q ss_pred             CccccccccccCeEEEEEEEcCCCcEEEEEEecCCC-cccHHHHHHHHHh--------ccccceecchHH-HHHHhhccc
Q 006915          406 NFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSAS-GQGLEEFKNEIET--------SNSNATIGANVK-AFVREMKTF  475 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~-~~~~~~~~~e~~~--------~~~~~~~~~~~~-~~~~~~~~~  475 (626)
                      ++...+.||.+.|=+|.+|+++.|. |+||++-+.. ...+..|.++++.        +|.+.+...... ..-+.+..+
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqy  102 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQY  102 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHH
Confidence            4555689999999999999998887 9999987544 4566777666554        222221111110 000111222


Q ss_pred             cCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          476 SDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       476 ~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ...+|.+      +|..-++.=|+.|++.||.-+|..+   |+|+|||.+||||+.=.-+.|+||.--
T Consensus       103 vkhnLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~g---VcHGDIKsENILiTSWNW~~LtDFAsF  167 (1431)
T KOG1240|consen  103 VKHNLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLG---VCHGDIKSENILITSWNWLYLTDFASF  167 (1431)
T ss_pred             HhhhhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcC---ccccccccceEEEeeechhhhhccccc
Confidence            2333333      3445566669999999999999998   999999999999998888999998754

>cd05151 ChoK Choline Kinase (ChoK)

Probab=98.87  E-value=4.3e-09  Score=97.94  Aligned_cols=123  Identities=20%  Similarity=0.107  Sum_probs=79.2

Q ss_pred             ccccccCeEEEEEEEcCCCcEEEEEEecCCCcccHHHHHHHHHh------ccc-cceecchHHHHHHhhccccCCCcccC
Q 006915          411 NKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIET------SNS-NATIGANVKAFVREMKTFSDPTLSAL  483 (626)
Q Consensus       411 ~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~  483 (626)
                      +.|+.|.++.||+++.. +..+++|....... ....+..|+..      ..+ .+++.......+..++++.+..+...
T Consensus         4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~~~~~~lv~e~i~G~~l~~~   81 (170)
T cd05151           4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFDPETGVLITEFIEGSELLTE   81 (170)
T ss_pred             eecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEeCCCCeEEEEecCCCccccc
Confidence            57899999999999875 77899999764321 11123333322      111 12222211112234555555544332


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHhCC--CCceEecCCCCCCeEECCCCcEEEEecCcch
Q 006915          484 LHWEMRFNIIIGIARGLLYLHQDS--RLRIIHRDLKTSNILLDQEMNPKISDFGLAL  538 (626)
Q Consensus       484 l~~~~~~~i~~~ia~gL~yLH~~~--~~~ivHrDlkp~NILl~~~~~~kl~DFGla~  538 (626)
                        ......++.+++++|+.||..+  ...++|+|++|.||+++ ++.++++|||.+.
T Consensus        82 --~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~  135 (170)
T cd05151          82 --DFSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG  135 (170)
T ss_pred             --cccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence              1112346789999999999986  23469999999999999 6689999999983

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=98.87  E-value=5.1e-09  Score=107.45  Aligned_cols=129  Identities=33%  Similarity=0.433  Sum_probs=91.8

Q ss_pred             ccccccccccCeEEEEEEEcCCCcEEEEEEecCCCcc---cHHHHHHHHHh------c-cccceecchHH--HHHHhhcc
Q 006915          407 FSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQ---GLEEFKNEIET------S-NSNATIGANVK--AFVREMKT  474 (626)
Q Consensus       407 f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~---~~~~~~~e~~~------~-~~~~~~~~~~~--~~~~~~~~  474 (626)
                      |...+.||.|+||.||++...  ..+|+|.+......   ....|.+|+..      . +++.+......  .....+++
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~   79 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY   79 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence            556789999999999999986  88999999854332   35667776653      2 23333322211  01122222


Q ss_pred             ccCCCcc---------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCC-cEEEEecCcchhc
Q 006915          475 FSDPTLS---------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEM-NPKISDFGLALDM  540 (626)
Q Consensus       475 ~~~~~l~---------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~-~~kl~DFGla~~~  540 (626)
                      ..+..+.         ..+.......++.|++.++.|+|..+   ++|||+||+|||++... .++++|||++..+
T Consensus        80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~---~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~  152 (384)
T COG0515          80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKG---IIHRDIKPENILLDRDGRVVKLIDFGLAKLL  152 (384)
T ss_pred             CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeecCCCCeEEEeccCcceec
Confidence            2222221         24667788899999999999999998   99999999999999998 7999999998533

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=98.86  E-value=1.2e-08  Score=95.63  Aligned_cols=93  Identities=22%  Similarity=0.217  Sum_probs=70.2

Q ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchh----------------------
Q 006915          482 ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALD----------------------  539 (626)
Q Consensus       482 ~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~----------------------  539 (626)
                      ..|++..+..|+.||+.||.|||+.+         ||+|||++.++.+|+  ||++..                      
T Consensus        12 ~~l~~~~~~~i~~qi~~~L~~lH~~~---------kp~Nil~~~~~~~~~--fG~~~~~~~~~~~g~~~y~aPE~~~~~~   80 (176)
T smart00750       12 RPLNEEEIWAVCLQCLRALRELHRQA---------KSGNILLTWDGLLKL--DGSVAFKTPEQSRVDPYFMAPEVIQGQS   80 (176)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhcC---------CcccEeEcCccceee--ccceEeeccccCCCcccccChHHhcCCC
Confidence            35899999999999999999999875         999999999999999  998711                      


Q ss_pred             ----------------ccccccC-------------------CC-----CChHHHH---HHHHHHHHhcccCCCCCCCHH
Q 006915          540 ----------------MMDQKLH-------------------AS-----SKPNEIL---KCINVGLLCVQEDPNDRPTMS  576 (626)
Q Consensus       540 ----------------~~~~~~~-------------------~~-----~~~~~~~---~~~~~~~~C~~~~p~~RPs~~  576 (626)
                                      ++.....                   ..     .......   .+.+++..|++.+|.+||++.
T Consensus        81 ~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~  160 (176)
T smart00750       81 YTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMRVCASRLPQRREAAN  160 (176)
T ss_pred             CcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHHHHhcccccccCHH
Confidence                            0000000                   00     0011111   478889999999999999999


Q ss_pred             HHHHHhccc
Q 006915          577 DVVIMLGSE  585 (626)
Q Consensus       577 ~vl~~L~~~  585 (626)
                      +++..+...
T Consensus       161 ~ll~~~~~~  169 (176)
T smart00750      161 HYLAHCRAL  169 (176)
T ss_pred             HHHHHHHHH
Confidence            999987654

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=98.85  E-value=1.6e-08  Score=109.66  Aligned_cols=34  Identities=24%  Similarity=0.393  Sum_probs=29.9

Q ss_pred             CccccccccccCeEEEEEEEcCC-CcEEEEEEecCC
Q 006915          406 NFSEANKLGKGGFGPVYKAKFPG-GQQIAVKRLSSA  440 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~~-~~~vAvK~l~~~  440 (626)
                      .|+. +.||.|++|+||+|++++ |+.||||++++.
T Consensus       121 ~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~  155 (537)
T PRK04750        121 DFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPD  155 (537)
T ss_pred             hcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcc
Confidence            4665 789999999999999987 999999999854

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=98.85  E-value=3.1e-09  Score=106.01  Aligned_cols=49  Identities=33%  Similarity=0.540  Sum_probs=41.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEE--CCCCc--EEEEecCcc
Q 006915          486 WEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILL--DQEMN--PKISDFGLA  537 (626)
Q Consensus       486 ~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl--~~~~~--~kl~DFGla  537 (626)
                      ...+.-|+.|+++|+.|||.++   |.|||+|++||||  |+|..  ..|+|||.+
T Consensus       340 ~r~~~~~laQlLEav~hL~~hg---vAhRDlKSDNiL~ElddD~~P~LVvaDFGCc  392 (598)
T KOG4158|consen  340 YRTGRVILAQLLEAVTHLHKHG---VAHRDLKSDNILLELDDDEIPQLVVADFGCC  392 (598)
T ss_pred             hHHHHHHHHHHHHHHHHHHHcc---chhhcccccceEEEecCCCCcEEEEccccee
Confidence            3445568899999999999998   9999999999999  44543  689999987

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=98.49  E-value=3.1e-07  Score=86.55  Aligned_cols=52  Identities=17%  Similarity=0.151  Sum_probs=43.6

Q ss_pred             CHHHHHHHHHHHHHHHHHH-HhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhc
Q 006915          485 HWEMRFNIIIGIARGLLYL-HQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM  540 (626)
Q Consensus       485 ~~~~~~~i~~~ia~gL~yL-H~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~  540 (626)
                      +..+...+..+++.+|..| |..+   |||+||++.|||++ ++.+.|+|||.+...
T Consensus       122 ~~~~~~~i~~~i~~~l~~l~H~~g---lVHGDLs~~NIL~~-~~~v~iIDF~qav~~  174 (197)
T cd05146         122 NDEEMKNAYYQVLSMMKQLYKECN---LVHADLSEYNMLWH-DGKVWFIDVSQSVEP  174 (197)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEE-CCcEEEEECCCceeC
Confidence            3345567889999999999 7777   99999999999997 467999999988544

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=98.45  E-value=5.6e-08  Score=103.06  Aligned_cols=131  Identities=22%  Similarity=0.224  Sum_probs=89.0

Q ss_pred             cccccCeEEEEEEEc----CCCcEEEEEEecCCCc--------ccHHHHHHHHHh-ccccceecchHH---HHHHhhccc
Q 006915          412 KLGKGGFGPVYKAKF----PGGQQIAVKRLSSASG--------QGLEEFKNEIET-SNSNATIGANVK---AFVREMKTF  475 (626)
Q Consensus       412 ~lG~G~fG~Vy~~~~----~~~~~vAvK~l~~~~~--------~~~~~~~~e~~~-~~~~~~~~~~~~---~~~~~~~~~  475 (626)
                      .+|+|.||.|++++-    ..++.+|+|.+++...        .....+.+++.. +-++. .++...   .+...+++.
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~-lhyafqt~~kl~l~ld~~   79 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVK-LHYAFQTDGKLYLILDFL   79 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceee-eeeeeccccchhHhhhhc
Confidence            379999999998743    3477889998875321        122333444432 22222 233222   333444555


Q ss_pred             cCCCcccC------CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhccccccC
Q 006915          476 SDPTLSAL------LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLH  546 (626)
Q Consensus       476 ~~~~l~~~------l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~  546 (626)
                      .++.+...      ........+...++-+++++|..+   |+|||+|++||+++.+|.+|+.|||++++.++.+..
T Consensus        80 rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~---iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~  153 (612)
T KOG0603|consen   80 RGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLG---IAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA  153 (612)
T ss_pred             ccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhH---HHHhcccccceeecccCccccCCchhhhHhHhhhhc
Confidence            54444333      334444556778899999999998   999999999999999999999999999998887765

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=98.41  E-value=1.2e-07  Score=100.48  Aligned_cols=52  Identities=38%  Similarity=0.589  Sum_probs=46.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          484 LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       484 l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++|.-...++++|+.||+|||.-.  -..|+.|++.|+++|..+.+||+|||+.
T Consensus        45 ~d~~F~~s~~rdi~~Gl~ylh~s~--i~~hg~l~s~nClvd~~w~lklt~~Gl~   96 (484)
T KOG1023|consen   45 LDYFFILSFIRDISKGLAYLHNSP--IGYHGALKSSNCLVDSRWVLKLTDFGLN   96 (484)
T ss_pred             ccHHHHHHHHHHHHHHHHHHhcCc--ceeeeeeccccceeeeeEEEEechhhhc
Confidence            567788889999999999999764  2399999999999999999999999986

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=98.41  E-value=1.3e-06  Score=84.83  Aligned_cols=127  Identities=19%  Similarity=0.224  Sum_probs=86.2

Q ss_pred             ccccccCeEEEEEEEcCCCcEEEEEEecCCCc-ccHHHHHHHHHhcc--------ccceecchHH-----HHHHhhcccc
Q 006915          411 NKLGKGGFGPVYKAKFPGGQQIAVKRLSSASG-QGLEEFKNEIETSN--------SNATIGANVK-----AFVREMKTFS  476 (626)
Q Consensus       411 ~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~-~~~~~~~~e~~~~~--------~~~~~~~~~~-----~~~~~~~~~~  476 (626)
                      +.|+.|.++.||++...+|+.+++|....... .....+..|.+...        ...++.....     ..+..++++.
T Consensus         4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~   83 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD   83 (223)
T ss_pred             eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence            57899999999999987778999999764322 12334555544411        1222222211     1234555665


Q ss_pred             CCCcccC-----CCHHHHHHHHHHHHHHHHHHHhCC--------------------------------------------
Q 006915          477 DPTLSAL-----LHWEMRFNIIIGIARGLLYLHQDS--------------------------------------------  507 (626)
Q Consensus       477 ~~~l~~~-----l~~~~~~~i~~~ia~gL~yLH~~~--------------------------------------------  507 (626)
                      +..+...     ++..++..++.++++.|.+||+..                                            
T Consensus        84 G~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (223)
T cd05154          84 GRVLRDRLLRPELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERLLRW  163 (223)
T ss_pred             CEecCCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHHHHH
Confidence            5544433     456777888899999999998531                                            


Q ss_pred             ---------CCceEecCCCCCCeEECC--CCcEEEEecCcc
Q 006915          508 ---------RLRIIHRDLKTSNILLDQ--EMNPKISDFGLA  537 (626)
Q Consensus       508 ---------~~~ivHrDlkp~NILl~~--~~~~kl~DFGla  537 (626)
                               ...++|+|++|.|||++.  ++.+.|+||+.+
T Consensus       164 ~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~  204 (223)
T cd05154         164 LEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELA  204 (223)
T ss_pred             HHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccc
Confidence                     245799999999999998  567899999987

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=98.37  E-value=3.5e-07  Score=102.19  Aligned_cols=109  Identities=25%  Similarity=0.450  Sum_probs=69.9

Q ss_pred             hcCccccccccccCeEEEEEEEcCC-CcEEEEEEecCCCcccHHHHHHHHHhccccceecchHHHHHHhhccccCCCccc
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFPG-GQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVKAFVREMKTFSDPTLSA  482 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~~-~~~vAvK~l~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  482 (626)
                      ..+|..++.|..|+||.||..+++. .+.+|+| +++..-.    .++++..-.....+|.|...+        .  ...
T Consensus        82 e~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~li----lRnilt~a~npfvvgDc~tll--------k--~~g  146 (1205)
T KOG0606|consen   82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQNLI----LRNILTFAGNPFVVGDCATLL--------K--NIG  146 (1205)
T ss_pred             ccccceeEeeccCCCCceeeeeccccccchhhc-ccccchh----hhccccccCCcceechhhhhc--------c--cCC
Confidence            3578888999999999999999864 7788884 4332100    001111000011111111100        0  000


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcch
Q 006915          483 LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLAL  538 (626)
Q Consensus       483 ~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~  538 (626)
                      .++        .+++.+++|||+.+   |+|||+||+|.||+.-|.+|++|||+++
T Consensus       147 ~lP--------vdmvla~Eylh~yg---ivhrdlkpdnllIT~mGhiKlTDfgLsk  191 (1205)
T KOG0606|consen  147 PLP--------VDMVLAVEYLHSYG---IVHRDLKPDNLLITSMGHIKLTDFGLSK  191 (1205)
T ss_pred             CCc--------chhhHHhHhhccCC---eecCCCCCCcceeeecccccccchhhhh
Confidence            111        23378999999998   9999999999999999999999999983

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.28  E-value=1.8e-06  Score=78.78  Aligned_cols=121  Identities=25%  Similarity=0.277  Sum_probs=80.2

Q ss_pred             ccccccCeEEEEEEEcCCCcEEEEEEec-CCCc-c------cHHHHHHHHHhccccceecchHH--------HHHHhhcc
Q 006915          411 NKLGKGGFGPVYKAKFPGGQQIAVKRLS-SASG-Q------GLEEFKNEIETSNSNATIGANVK--------AFVREMKT  474 (626)
Q Consensus       411 ~~lG~G~fG~Vy~~~~~~~~~vAvK~l~-~~~~-~------~~~~~~~e~~~~~~~~~~~~~~~--------~~~~~~~~  474 (626)
                      ..+++|+-..+|.+.+.+ ..+.+|.=. +.-. .      ..+.-.+|..+....+-.|.+..        .....|++
T Consensus         2 ~~i~~GAEa~i~~~~~~g-~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~   80 (204)
T COG3642           2 DLIKQGAEAIIYLTDFLG-LPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY   80 (204)
T ss_pred             chhhCCcceeEEeeeccC-cceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence            468899999999997744 345555422 2111 1      12234455555443333343333        11234566


Q ss_pred             ccCCCcccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          475 FSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       475 ~~~~~l~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ..+..+.+.+... +..++..|-.-+.-||..+   |+|+||.++||++..+. +.++||||+
T Consensus        81 I~G~~lkd~l~~~-~~~~~r~vG~~vg~lH~~g---ivHGDLTtsNiIl~~~~-i~~IDfGLg  138 (204)
T COG3642          81 IEGELLKDALEEA-RPDLLREVGRLVGKLHKAG---IVHGDLTTSNIILSGGR-IYFIDFGLG  138 (204)
T ss_pred             eCChhHHHHHHhc-chHHHHHHHHHHHHHHhcC---eecCCCccceEEEeCCc-EEEEECCcc
Confidence            6666655555443 5678888999999999998   99999999999998775 999999998

>smart00473 PAN_AP divergent subfamily of APPLE domains

Probab=98.09  E-value=1e-05  Score=64.39  Aligned_cols=71  Identities=34%  Similarity=0.711  Sum_probs=50.9

Q ss_pred             CceeEeeeeecCCCCCC-CCCCChHHHHHHhcc-CCCEEEEeeccccccCCCCCeEEec-cccccccccccCCCceEEEE
Q 006915          213 DMFLKRQITKVGETDSC-LPVASEAECSKKCRG-FCPCTAYSYKESKRRDEAGTCCIWI-EELKDLREDFSNGGHELYIR  289 (626)
Q Consensus       213 ~~f~~~~~~~~~~~~~~-~~~~s~~~C~~~Cl~-~CsC~a~~y~~~~~~~~~~~C~~~~-~~l~~~~~~~~~~~~~~~lr  289 (626)
                      ..|..+.++.+++.... ....++++|++.|++ +|+|.||.|.+     .++.|++|. +.+.+.. .....+..+|.|
T Consensus         4 ~~f~~~~~~~l~~~~~~~~~~~s~~~C~~~C~~~~~~C~s~~y~~-----~~~~C~l~~~~~~~~~~-~~~~~~~~~y~~   77 (78)
T smart00473        4 DCFVRLPNTKLPGFSRIVISVASLEECASKCLNSNCSCRSFTYNN-----GTKGCLLWSESSLGDAR-LFPSGGVDLYEK   77 (78)
T ss_pred             ceeEEecCccCCCCcceeEcCCCHHHHHHHhCCCCCceEEEEEcC-----CCCEEEEeeCCccccce-ecccCCceeEEe
Confidence            46888888888422211 256799999999999 99999999963     357899998 6666665 334445566654

Apple-like domains present in Plasminogen, C. elegans hypothetical ORFs and the extracellular portion of plant receptor-like protein kinases. Predicted to possess protein- and/or carbohydrate-binding functions.

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.09  E-value=7e-06  Score=74.60  Aligned_cols=125  Identities=25%  Similarity=0.288  Sum_probs=77.8

Q ss_pred             ccccccccCeEEEEEEEcCCCcEEEEEEec-CCC-------cccHHHHHHHHHhccccceecchHHHHH--------Hhh
Q 006915          409 EANKLGKGGFGPVYKAKFPGGQQIAVKRLS-SAS-------GQGLEEFKNEIETSNSNATIGANVKAFV--------REM  472 (626)
Q Consensus       409 ~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~-~~~-------~~~~~~~~~e~~~~~~~~~~~~~~~~~~--------~~~  472 (626)
                      ....|-+|+-+.|+++.+ .|+...||.=. +.-       .-.....++|....+..+.+|.+...++        ..|
T Consensus        11 ~l~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M   89 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM   89 (229)
T ss_pred             cceeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence            446889999999999998 46676676532 211       1123445566665443333333322111        123


Q ss_pred             ccccCC-CcccC--------CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCc---EEEEecCcc
Q 006915          473 KTFSDP-TLSAL--------LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMN---PKISDFGLA  537 (626)
Q Consensus       473 ~~~~~~-~l~~~--------l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~---~kl~DFGla  537 (626)
                      |++.+. +..++        ........++..|-+-+.-||.++   |||+||..+||||..++.   +.++|||++
T Consensus        90 E~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~nd---iiHGDLTTSNill~~~~~~~~~~lIdfgls  163 (229)
T KOG3087|consen   90 EFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDND---IIHGDLTTSNILLRSDGNQITPILIDFGLS  163 (229)
T ss_pred             EeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCC---eecccccccceEEecCCCcCceEEEeecch
Confidence            333221 11111        111222578889999999999998   999999999999966544   589999998

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=97.98  E-value=9.2e-06  Score=76.29  Aligned_cols=49  Identities=33%  Similarity=0.502  Sum_probs=37.3

Q ss_pred             HHHHHHHHHHHHHHHH-HhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhc
Q 006915          488 MRFNIIIGIARGLLYL-HQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM  540 (626)
Q Consensus       488 ~~~~i~~~ia~gL~yL-H~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~  540 (626)
                      ....++.+++..+..+ |..+   |+|+||.+.|||++++ .+.|+|||.+...
T Consensus       107 ~~~~~~~~il~~~~~~~~~~g---ivHGDLs~~NIlv~~~-~~~iIDf~qav~~  156 (188)
T PF01163_consen  107 EPKELLEEILEEIIKMLHKAG---IVHGDLSEYNILVDDG-KVYIIDFGQAVDS  156 (188)
T ss_dssp             THHHHHHHHHHHHHHHHHCTT---EEESS-STTSEEEETT-CEEE--GTTEEET
T ss_pred             hHHHHHHHHHHHHHHHHHhcC---ceecCCChhhEEeecc-eEEEEecCcceec
Confidence            4556788888866664 6777   9999999999999988 9999999988443

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=97.76  E-value=0.00011  Score=71.44  Aligned_cols=127  Identities=24%  Similarity=0.219  Sum_probs=73.3

Q ss_pred             cccccccccCeEEEEEEEcCCCcEEEEEEecCCCcc--------------------cH--HHHHHHHHhccccceecchH
Q 006915          408 SEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQ--------------------GL--EEFKNEIETSNSNATIGANV  465 (626)
Q Consensus       408 ~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~--------------------~~--~~~~~e~~~~~~~~~~~~~~  465 (626)
                      .+...||.|--+.||.|..+.|.++|||.-+.....                    ..  ..-.+|.+....+.-.|..+
T Consensus        94 ~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~V  173 (304)
T COG0478          94 AIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKV  173 (304)
T ss_pred             hhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCC
Confidence            445799999999999999999999999975432100                    00  01112222211111111111


Q ss_pred             H------HHHHhhccccCCCcccC-CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          466 K------AFVREMKTFSDPTLSAL-LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       466 ~------~~~~~~~~~~~~~l~~~-l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      .      .....|++..+..+... ++....-.|+..|++-+.-+-..+   |||+|+.+-|||+++++.+.++||--+
T Consensus       174 P~P~~~nRHaVvMe~ieG~eL~~~r~~~en~~~il~~il~~~~~~~~~G---iVHGDlSefNIlV~~dg~~~vIDwPQ~  249 (304)
T COG0478         174 PKPIAWNRHAVVMEYIEGVELYRLRLDVENPDEILDKILEEVRKAYRRG---IVHGDLSEFNILVTEDGDIVVIDWPQA  249 (304)
T ss_pred             CCccccccceeeeehcccceeecccCcccCHHHHHHHHHHHHHHHHHcC---ccccCCchheEEEecCCCEEEEeCccc
Confidence            1      11123444443333221 123333334444444444444455   999999999999999999999999765

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=97.63  E-value=0.00031  Score=76.06  Aligned_cols=27  Identities=30%  Similarity=0.513  Sum_probs=26.6

Q ss_pred             eEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          511 IIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       511 ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++|.|..|.||+++.++.+-+.|||+.
T Consensus       286 ffHaDpHpGNi~v~~~g~i~~lDfGi~  312 (517)
T COG0661         286 FFHADPHPGNILVRSDGRIVLLDFGIV  312 (517)
T ss_pred             ccccCCCccceEEecCCcEEEEcCcce
Confidence            999999999999999999999999998

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=97.56  E-value=6.6e-05  Score=80.00  Aligned_cols=133  Identities=24%  Similarity=0.318  Sum_probs=88.4

Q ss_pred             HhhcCccccccccccCeEEEEEEEc--CCCcEEEEEEecCCCccc------HHHHHHHHHhccccceecchH-----HHH
Q 006915          402 AATDNFSEANKLGKGGFGPVYKAKF--PGGQQIAVKRLSSASGQG------LEEFKNEIETSNSNATIGANV-----KAF  468 (626)
Q Consensus       402 ~~~~~f~~~~~lG~G~fG~Vy~~~~--~~~~~vAvK~l~~~~~~~------~~~~~~e~~~~~~~~~~~~~~-----~~~  468 (626)
                      ..+..|.....||.|.|+.|++...  .++..+|+|.+.+.....      ..+...|..+.-.....++..     ...
T Consensus       262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~  341 (524)
T KOG0601|consen  262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQG  341 (524)
T ss_pred             eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccc
Confidence            3456788889999999999999865  357889999887543222      222223322211111112111     111


Q ss_pred             HHhhccccCCC------cccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCC-CcEEEEecCcc
Q 006915          469 VREMKTFSDPT------LSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQE-MNPKISDFGLA  537 (626)
Q Consensus       469 ~~~~~~~~~~~------l~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~-~~~kl~DFGla  537 (626)
                      +.-.+++.+++      ....++...++++..|++.++.++|+..   ++|+|+||+||++..+ +..++.|||.+
T Consensus       342 ~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~---~~~~d~~psni~i~~~~~~~~~~~~~~~  414 (524)
T KOG0601|consen  342 YIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKL---FVHLDVKPSNILISNDGFFSKLGDFGCW  414 (524)
T ss_pred             cCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchh---hhcccccccceeeccchhhhhccccccc
Confidence            11222332222      2334667778899999999999999887   9999999999999886 88899999987

>PRK09902 hypothetical protein; Provisional

Probab=97.56  E-value=0.00026  Score=67.09  Aligned_cols=125  Identities=16%  Similarity=0.160  Sum_probs=79.7

Q ss_pred             cccccCeEEEEEEEcCCCcEEEEEEecCC---C---cccHHHHHHHHHhccccceecchHHHHH--------------Hh
Q 006915          412 KLGKGGFGPVYKAKFPGGQQIAVKRLSSA---S---GQGLEEFKNEIETSNSNATIGANVKAFV--------------RE  471 (626)
Q Consensus       412 ~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~---~---~~~~~~~~~e~~~~~~~~~~~~~~~~~~--------------~~  471 (626)
                      --|+||-+-|++-.+. |+.+=+|+-...   +   ......|.+|+.....+.-.|..+...+              .+
T Consensus        25 N~~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LV  103 (216)
T PRK09902         25 NYRRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLV  103 (216)
T ss_pred             CcCCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEE
Confidence            3577888889998774 447888986521   1   2356678888765332222222111110              00


Q ss_pred             hccccC-CCccc--------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCc--EEEEecCcchhc
Q 006915          472 MKTFSD-PTLSA--------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMN--PKISDFGLALDM  540 (626)
Q Consensus       472 ~~~~~~-~~l~~--------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~--~kl~DFGla~~~  540 (626)
                      .+...+ .++..        ..+...+..++.+++..+.-||..+   +.|+|+-+.|||++.++.  ++++||--++..
T Consensus       104 Te~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~G---v~Hgdly~khIll~~~g~~~v~lIDlEk~r~~  180 (216)
T PRK09902        104 TEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVN---RQHGCCYVRHIYVKTEGKAEAGFLDLEKSRRR  180 (216)
T ss_pred             EEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHhheeecCCCCeeEEEEEhhccchh
Confidence            111110 11111        2245566789999999999999998   999999999999986666  999999766433

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=97.37  E-value=7.7e-05  Score=79.53  Aligned_cols=129  Identities=22%  Similarity=0.346  Sum_probs=78.0

Q ss_pred             Cccccccccc--cCeEEEEEEEc---CCCcEEEEEEecC--CCcccHHHHHHHHHhccccceecchHH--------HHHH
Q 006915          406 NFSEANKLGK--GGFGPVYKAKF---PGGQQIAVKRLSS--ASGQGLEEFKNEIETSNSNATIGANVK--------AFVR  470 (626)
Q Consensus       406 ~f~~~~~lG~--G~fG~Vy~~~~---~~~~~vAvK~l~~--~~~~~~~~~~~e~~~~~~~~~~~~~~~--------~~~~  470 (626)
                      .|.+...+|.  |.+|.||.++.   .++..+|+|+-+.  ...+....-.+|+.....+...-..+.        ....
T Consensus       115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lf  194 (524)
T KOG0601|consen  115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILF  194 (524)
T ss_pred             hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcce
Confidence            3455678999  99999999987   3588899998432  111222222233332222111111110        0000


Q ss_pred             hhccccCCCc-------ccCCCHHHHHHHHHHHHH----HHHHHHhCCCCceEecCCCCCCeEECCC-CcEEEEecCcc
Q 006915          471 EMKTFSDPTL-------SALLHWEMRFNIIIGIAR----GLLYLHQDSRLRIIHRDLKTSNILLDQE-MNPKISDFGLA  537 (626)
Q Consensus       471 ~~~~~~~~~l-------~~~l~~~~~~~i~~~ia~----gL~yLH~~~~~~ivHrDlkp~NILl~~~-~~~kl~DFGla  537 (626)
                      ......+..+       ...++......+..+...    ||.++|+..   ++|-|+||.||.+..+ ...+++|||+.
T Consensus       195 iqtE~~~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~---~~~~~~kp~~i~~~~~~~s~~~~df~~v  270 (524)
T KOG0601|consen  195 IQTELCGESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNN---IVHDDLKPANIFTTSDWTSCKLTDFGLV  270 (524)
T ss_pred             eeeccccchhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCc---ccccccchhheecccccceeecCCccee
Confidence            0111111111       122444555566666666    999999987   9999999999999999 88999999987

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=97.24  E-value=0.00045  Score=68.94  Aligned_cols=50  Identities=22%  Similarity=0.250  Sum_probs=44.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECC-------CCcEEEEecCcch
Q 006915          486 WEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQ-------EMNPKISDFGLAL  538 (626)
Q Consensus       486 ~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~-------~~~~kl~DFGla~  538 (626)
                      ...+..++.+++..+.-||..+   |+|+|+++.|||++.       +..+.|+||+.+.
T Consensus       137 ~~~~~~ll~~la~~i~~LH~~G---i~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~  193 (268)
T PRK15123        137 PRLKRMLIKRVATMVRDMHAAG---INHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQ  193 (268)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCc---CccCCCChhhEEEeccccCCCCCceEEEEECCccc
Confidence            3456689999999999999998   999999999999975       4679999999884

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=97.19  E-value=0.00052  Score=65.99  Aligned_cols=51  Identities=29%  Similarity=0.339  Sum_probs=45.5

Q ss_pred             CHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCC---cEEEEecCcch
Q 006915          485 HWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEM---NPKISDFGLAL  538 (626)
Q Consensus       485 ~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~---~~kl~DFGla~  538 (626)
                      +...+..++.+++..+.-||..+   |+|+|+++.|||++.+.   .+.|+||+.+.
T Consensus       116 ~~~~~~~ll~~l~~~i~~lH~~g---i~H~Dl~~~NILv~~~~~~~~~~lIDld~~~  169 (206)
T PF06293_consen  116 DPSQRRELLRALARLIAKLHDAG---IYHGDLNPSNILVDPDDGQYRFYLIDLDRMR  169 (206)
T ss_pred             chhhHHHHHHHHHHHHHHHHHCc---CCCCCCCcccEEEeCCCCceeEEEEcchhce
Confidence            44566789999999999999998   99999999999998887   89999999774

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=97.14  E-value=0.0015  Score=62.15  Aligned_cols=129  Identities=16%  Similarity=0.167  Sum_probs=79.1

Q ss_pred             hcCccccccccccCeEEEEEEEcCCCcEEEEEEecCCCcccHHHHHHH---------HHhccccceecc-----------
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNE---------IETSNSNATIGA-----------  463 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~e---------~~~~~~~~~~~~-----------  463 (626)
                      .++|...+.+-......|.+-.. +++.+.+|..+.......+.|..-         +.....++-.|.           
T Consensus        30 ~~~~~~~kv~k~~~r~~ValIei-~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~e  108 (229)
T PF06176_consen   30 DNNYKIIKVFKNTKRNYVALIEI-DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAAE  108 (229)
T ss_pred             hCCceEEEeecCCCccEEEEEEE-CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeeee
Confidence            45677777777777777776666 568889998876443333333221         111000000000           


Q ss_pred             -----hHHHHHHhhccccCCCcccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcch
Q 006915          464 -----NVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLAL  538 (626)
Q Consensus       464 -----~~~~~~~~~~~~~~~~l~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~  538 (626)
                           ....++..+|+..+..+.+......  .++..+..++.-||..|   +.|+|..|.|+++++++ ++++||+..+
T Consensus       109 kk~~~~~~~~~ll~EYIeG~~l~d~~~i~e--~~~~ki~~~ikqlH~~G---~~HGD~hpgNFlv~~~~-i~iID~~~k~  182 (229)
T PF06176_consen  109 KKIFRYTSSYVLLMEYIEGVELNDIEDIDE--DLAEKIVEAIKQLHKHG---FYHGDPHPGNFLVSNNG-IRIIDTQGKR  182 (229)
T ss_pred             eeeccceeEEEEEEEEecCeecccchhcCH--HHHHHHHHHHHHHHHcC---CccCCCCcCcEEEECCc-EEEEECcccc
Confidence                 0011223456666665554432221  35567888899999998   99999999999998655 9999998764


Q ss_pred             h
Q 006915          539 D  539 (626)
Q Consensus       539 ~  539 (626)
                      .
T Consensus       183 ~  183 (229)
T PF06176_consen  183 M  183 (229)
T ss_pred             c
Confidence            3

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=97.14  E-value=8.6e-05  Score=82.52  Aligned_cols=133  Identities=26%  Similarity=0.358  Sum_probs=84.2

Q ss_pred             CccccccccccCeEEEEEEEcCC--CcEEEEEEecCCC--cccHHHHHHHHH-------hccccceecchHH--HHHHhh
Q 006915          406 NFSEANKLGKGGFGPVYKAKFPG--GQQIAVKRLSSAS--GQGLEEFKNEIE-------TSNSNATIGANVK--AFVREM  472 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~~--~~~vAvK~l~~~~--~~~~~~~~~e~~-------~~~~~~~~~~~~~--~~~~~~  472 (626)
                      .|.+.+.||+|+|+.|-......  ...+|+|.+....  .........|..       +.|++.+++....  ..+..+
T Consensus        21 ~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~  100 (601)
T KOG0590|consen   21 QYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSL  100 (601)
T ss_pred             cccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccccc
Confidence            45566789999999998886633  4567777766432  111122222222       3444444443221  222223


Q ss_pred             ccccCCCcccC--------CCHHHHHHHHHHHHHHHHHHH-hCCCCceEecCCCCCCeEECCCC-cEEEEecCcchhcc
Q 006915          473 KTFSDPTLSAL--------LHWEMRFNIIIGIARGLLYLH-QDSRLRIIHRDLKTSNILLDQEM-NPKISDFGLALDMM  541 (626)
Q Consensus       473 ~~~~~~~l~~~--------l~~~~~~~i~~~ia~gL~yLH-~~~~~~ivHrDlkp~NILl~~~~-~~kl~DFGla~~~~  541 (626)
                      ++-.++.+...        ......-.+..|+..++.|+| ..+   +.||||||+|.+++..+ ..|++|||+|..+.
T Consensus       101 ~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~---~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~  176 (601)
T KOG0590|consen  101 SYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENG---VTHRDIKPSNSLLDESGSALKIADFGLATAYR  176 (601)
T ss_pred             CcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccc---cccCCCCCccchhccCCCcccCCCchhhcccc
Confidence            33223322222        223344568899999999999 777   99999999999999999 99999999994443

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=97.06  E-value=6.7e-05  Score=78.64  Aligned_cols=102  Identities=23%  Similarity=0.280  Sum_probs=65.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhccccccCCCCChHHHHHHHHHHHH
Q 006915          484 LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSKPNEILKCINVGLL  563 (626)
Q Consensus       484 l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~  563 (626)
                      .++...+.++.|++.|+.|   ++   .+|||+||.||....+..+||.|||+...+............-...+....++
T Consensus       356 ~s~s~~~~~~~q~~~~~~y---k~---~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~Ym  429 (516)
T KOG1033|consen  356 RSLSLMLDIFKQIAPAVEY---KG---LIHRDLKPSNIFFSDDDQLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYM  429 (516)
T ss_pred             cchhHHHHHHHhhccchhh---cc---chhhhccccccccccchhhhhhhhhheeecccCCcccchhhhhhhcccccccC
Confidence            4567778899999999999   55   99999999999999999999999999855544331111111112223333344


Q ss_pred             hcccCCCCCCCHHHHHHHhccccccCCC
Q 006915          564 CVQEDPNDRPTMSDVVIMLGSEAMNLAT  591 (626)
Q Consensus       564 C~~~~p~~RPs~~~vl~~L~~~~~~~~~  591 (626)
                      |.+.--.+-.+....++.|+.++.|+..
T Consensus       430 sPEQi~g~~y~~kvdIyaLGlil~EL~~  457 (516)
T KOG1033|consen  430 SPEQIRGQQYSEKVDIYALGLILAELLI  457 (516)
T ss_pred             CHHHHhhhhhhhhcchhhHHHHHHHHHH
Confidence            4444444444555555555555555443

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=96.97  E-value=0.00062  Score=67.35  Aligned_cols=42  Identities=29%  Similarity=0.314  Sum_probs=38.4

Q ss_pred             HHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEE
Q 006915          490 FNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKIS  532 (626)
Q Consensus       490 ~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~  532 (626)
                      .+++.||..||.|||+. .|+|+|+++..+-|.+..++-+||.
T Consensus       179 kkw~tqIlsal~yLhs~-~PpiihgnlTc~tifiq~ngLIkig  220 (458)
T KOG1266|consen  179 KKWCTQILSALSYLHSC-DPPIIHGNLTCDTIFIQHNGLIKIG  220 (458)
T ss_pred             HHHHHHHHhhhhhhhcc-CCccccCCcchhheeecCCceEEec
Confidence            46899999999999997 5899999999999999999888875

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=96.95  E-value=0.0029  Score=61.00  Aligned_cols=143  Identities=22%  Similarity=0.242  Sum_probs=83.0

Q ss_pred             cCHHHHHHhhcCccccccc---cccCeEEEEEEEcCCCcEEEEEEecCCCcccHH---------HHH-------------
Q 006915          395 IDFESILAATDNFSEANKL---GKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLE---------EFK-------------  449 (626)
Q Consensus       395 ~~~~~l~~~~~~f~~~~~l---G~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~---------~~~-------------  449 (626)
                      .+++.|....+...+....   ..|--..||+|.-.++..+|||+.+........         .|.             
T Consensus        35 ~t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W  114 (268)
T COG1718          35 RTLETLRRLLSRGVITELVGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAW  114 (268)
T ss_pred             HHHHHHHHHhcCCceeeeEeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHH
Confidence            3455555555555555554   456667899998888999999998743211100         010             


Q ss_pred             HHHHhccccceecchHH--------HHHHhhcccc-----CCCcccC-CCHHHHHHHHHHHHHHHHHHHh-CCCCceEec
Q 006915          450 NEIETSNSNATIGANVK--------AFVREMKTFS-----DPTLSAL-LHWEMRFNIIIGIARGLLYLHQ-DSRLRIIHR  514 (626)
Q Consensus       450 ~e~~~~~~~~~~~~~~~--------~~~~~~~~~~-----~~~l~~~-l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivHr  514 (626)
                      .+-+..|+-++....+.        .-+..|++..     .+.|.+. +.......+..++++.+.-|-. .+   +||+
T Consensus       115 ~~kEf~NL~R~~eAGVrvP~Pi~~~~nVLvMEfIg~~g~pAP~LkDv~~e~~e~~~~~~~~v~~~~~l~~~a~---LVHg  191 (268)
T COG1718         115 ARKEFRNLKRAYEAGVRVPEPIAFRNNVLVMEFIGDDGLPAPRLKDVPLELEEAEGLYEDVVEYMRRLYKEAG---LVHG  191 (268)
T ss_pred             HHHHHHHHHHHHHcCCCCCCceeecCCeEEEEeccCCCCCCCCcccCCcCchhHHHHHHHHHHHHHHHHHhcC---cccc
Confidence            11111222222211111        1112233332     2233322 1222456677788888887766 44   9999


Q ss_pred             CCCCCCeEECCCCcEEEEecCcchhcc
Q 006915          515 DLKTSNILLDQEMNPKISDFGLALDMM  541 (626)
Q Consensus       515 Dlkp~NILl~~~~~~kl~DFGla~~~~  541 (626)
                      ||..=|||+. ++.+.|+|||-|...-
T Consensus       192 DLSEyNiL~~-~~~p~iID~~QaV~~~  217 (268)
T COG1718         192 DLSEYNILVH-DGEPYIIDVSQAVTID  217 (268)
T ss_pred             cchhhheEEE-CCeEEEEECccccccC
Confidence            9999999999 8899999999884443

>cd01100 APPLE_Factor_XI_like Subfamily of PAN/APPLE-like domains; present in plasma prekallikrein/coagulation factor XI, microneme antigen proteins, and a few prokaryotic proteins

Probab=96.91  E-value=0.001  Score=52.08  Aligned_cols=36  Identities=22%  Similarity=0.518  Sum_probs=30.0

Q ss_pred             CCCChHHHHHHhccCCCEEEEeeccccccCCCCCeEEeccc
Q 006915          231 PVASEAECSKKCRGFCPCTAYSYKESKRRDEAGTCCIWIEE  271 (626)
Q Consensus       231 ~~~s~~~C~~~Cl~~CsC~a~~y~~~~~~~~~~~C~~~~~~  271 (626)
                      ...+.++|++.|+.+|+|.||.|.     ...+.|+++...
T Consensus        23 ~~~s~~~Cq~~C~~~~~C~afT~~-----~~~~~C~lk~~~   58 (73)
T cd01100          23 FASSAEQCQAACTADPGCLAFTYN-----TKSKKCFLKSSE   58 (73)
T ss_pred             ecCCHHHHHHHcCCCCCceEEEEE-----CCCCeEEcccCC
Confidence            456899999999999999999997     345789997654

PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions.

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=96.81  E-value=0.0038  Score=67.58  Aligned_cols=30  Identities=20%  Similarity=0.397  Sum_probs=27.1

Q ss_pred             ccccccCeEEEEEEEcCCCcEEEEEEecCC
Q 006915          411 NKLGKGGFGPVYKAKFPGGQQIAVKRLSSA  440 (626)
Q Consensus       411 ~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~  440 (626)
                      +.||.-+.|+||+|++++|+.||||+-++.
T Consensus       167 ~piaaASlaQVhrA~L~~G~~VaVKVQ~P~  196 (538)
T KOG1235|consen  167 EPIAAASLAQVHRARLKNGEDVAVKVQHPG  196 (538)
T ss_pred             chhhhcchhheEEEEecCCCEEEEEecCcC
Confidence            679999999999999999999999997653

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=96.68  E-value=0.0028  Score=61.78  Aligned_cols=31  Identities=39%  Similarity=0.432  Sum_probs=21.6

Q ss_pred             CCCceEecCCCCCCeEEC-CCCcEEEEecCcc
Q 006915          507 SRLRIIHRDLKTSNILLD-QEMNPKISDFGLA  537 (626)
Q Consensus       507 ~~~~ivHrDlkp~NILl~-~~~~~kl~DFGla  537 (626)
                      ....++|+|+.|.|||++ +++.+-|+||+.+
T Consensus       164 ~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a  195 (239)
T PF01636_consen  164 LPPVLIHGDLHPGNILVDPSDGRIGIIDFEDA  195 (239)
T ss_dssp             SCEEEE-SS-SGGGEEEESSTTEEEE--GTT-
T ss_pred             CCcEEEEeccccccceeeeccceeEEEecccc
Confidence            345699999999999999 6666689999887

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=96.65  E-value=0.0071  Score=63.78  Aligned_cols=117  Identities=21%  Similarity=0.261  Sum_probs=79.9

Q ss_pred             eEEEEEEEc-CCCcEEEEEEecCCCc------ccHHHHHHHHHhccccceecchHH------HHHHhhccccC-CCc---
Q 006915          418 FGPVYKAKF-PGGQQIAVKRLSSASG------QGLEEFKNEIETSNSNATIGANVK------AFVREMKTFSD-PTL---  480 (626)
Q Consensus       418 fG~Vy~~~~-~~~~~vAvK~l~~~~~------~~~~~~~~e~~~~~~~~~~~~~~~------~~~~~~~~~~~-~~l---  480 (626)
                      -.+.|++.. .||..+.+|++.....      ....+....+.+.|++.+....+.      .++.+++|++. ++|   
T Consensus       289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~  368 (655)
T KOG3741|consen  289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL  368 (655)
T ss_pred             cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence            357899976 5799999999942211      223455555666777766543331      11122222221 011   


Q ss_pred             ------------------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          481 ------------------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       481 ------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                                        ...+++...+.++.|+..||.++|+.|   +.-+-|-+.+||++.+.+++|+--|..
T Consensus       369 ~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssG---LAck~L~~~kIlv~G~~RIriS~C~i~  440 (655)
T KOG3741|consen  369 YFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSG---LACKTLDLKKILVTGKMRIRISGCGIM  440 (655)
T ss_pred             HccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcC---ceeecccHhHeEeeCcceEEEecccce
Confidence                              112457788999999999999999998   888999999999999999998877765

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=96.60  E-value=0.017  Score=54.39  Aligned_cols=135  Identities=21%  Similarity=0.248  Sum_probs=79.6

Q ss_pred             CCCCCccCHHHHHHhhcCccccccccccCe-EEEEEEEcCCCcEEEEEEecC---CCc------------------ccHH
Q 006915          389 GIDLPFIDFESILAATDNFSEANKLGKGGF-GPVYKAKFPGGQQIAVKRLSS---ASG------------------QGLE  446 (626)
Q Consensus       389 ~~~~~~~~~~~l~~~~~~f~~~~~lG~G~f-G~Vy~~~~~~~~~vAvK~l~~---~~~------------------~~~~  446 (626)
                      +..+..|+.     .+..++..+.||.|.. |.||++++ +|+.+|+|..+.   ...                  ....
T Consensus        26 gPKL~~F~~-----h~~~I~flefLg~g~~~~~V~kv~I-~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~   99 (207)
T PF13095_consen   26 GPKLEPFTH-----HGDDIEFLEFLGHGSHDGYVFKVEI-DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYAD   99 (207)
T ss_pred             CCCcCCcCC-----CCCcEeeeeecCCCCceeEEEEEEE-CCeEEEEEEeeccccCCCccccccccccccccchhhhhcC
Confidence            344555655     2367888999999999 99999999 567999999431   000                  0112


Q ss_pred             HHHHHHHh---------ccc--cceecchHH---HHHHhh----ccccCCC----cccCCCHHH--HHHHHHHHHHHHHH
Q 006915          447 EFKNEIET---------SNS--NATIGANVK---AFVREM----KTFSDPT----LSALLHWEM--RFNIIIGIARGLLY  502 (626)
Q Consensus       447 ~~~~e~~~---------~~~--~~~~~~~~~---~~~~~~----~~~~~~~----l~~~l~~~~--~~~i~~~ia~gL~y  502 (626)
                      .|..|...         ..+  ++..|+-..   .-...+    +......    ..++.+...  ..+-+.+|.+-|..
T Consensus       100 PF~~ECRAfgRLke~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~~~~~~~~~~~~~dl~~  179 (207)
T PF13095_consen  100 PFNCECRAFGRLKEAGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDPPLQIRDIPQMLRDLKI  179 (207)
T ss_pred             hHHHHHHhhHHHHhccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCccccchhHHHHHHHHHHH
Confidence            34444433         122  333333211   011101    0000000    111222222  34457788889999


Q ss_pred             HHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          503 LHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       503 LH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +|..+   |+-+|+|+.|..     .-||+|||.+
T Consensus       180 ~~k~g---I~~~Dv~~~ny~-----~G~lvDfs~~  206 (207)
T PF13095_consen  180 LHKLG---IVPRDVKPRNYR-----GGKLVDFSSS  206 (207)
T ss_pred             HHHCC---eeeccCcccccc-----CCEEEecccC
Confidence            99988   999999999987     4689999864

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=96.48  E-value=0.013  Score=55.30  Aligned_cols=54  Identities=19%  Similarity=0.170  Sum_probs=49.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          484 LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       484 l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      -+|..|.+||.++++.+.+|++.....+.-.|++++|+-+++++.+|++|...+
T Consensus        56 ~~w~~R~~iA~~lL~~l~~l~~~~~~~~~lcDv~~~nfgv~~~~~lk~iDld~v  109 (188)
T PF12260_consen   56 SPWEQRAKIALQLLELLEELDHGPLGFFYLCDVSPDNFGVNDDGRLKLIDLDDV  109 (188)
T ss_pred             cCHHHHHHHHHHHHHHHHHHhcCCCCcEEEeecchHHeEEeCCCcEEEEechhc
Confidence            469999999999999999999865556888999999999999999999999877

Proteins in this uncharacterised family are described as transmembrane proteins.

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=96.41  E-value=0.02  Score=55.84  Aligned_cols=29  Identities=17%  Similarity=0.219  Sum_probs=25.7

Q ss_pred             CCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          508 RLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       508 ~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      .+.++|+|+.|.||++++++ +.|+||+.+
T Consensus       152 ~~~~~HgD~~~~Nii~~~~~-~~iIDwe~a  180 (226)
T TIGR02172       152 TSTCLHGDFQIGNLITSGKG-TYWIDLGDF  180 (226)
T ss_pred             CCceEecCCCCCcEEEcCCC-cEEEechhc
Confidence            34578999999999999888 999999987

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=95.93  E-value=0.034  Score=50.91  Aligned_cols=123  Identities=20%  Similarity=0.185  Sum_probs=70.0

Q ss_pred             ccccccccCeEEEEEEEcCCCcEEEEEEecCCCcccHHHHHHHHHhccccceecchHH-----HHHHhhccccCCCcccC
Q 006915          409 EANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVK-----AFVREMKTFSDPTLSAL  483 (626)
Q Consensus       409 ~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~e~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~  483 (626)
                      ..+.||+|.+|.||+|.+. +..+|+|+-+..+  ....+..|.+...+....+..-.     .-...|++..+..+...
T Consensus        26 v~~~L~KG~~s~Vyl~~~~-~~~~a~Kvrr~ds--~r~~l~kEakiLeil~g~~~~p~vy~yg~~~i~me~i~G~~L~~~  102 (201)
T COG2112          26 VEKELAKGTTSVVYLGEWR-GGEVALKVRRRDS--PRRNLEKEAKILEILAGEGVTPEVYFYGEDFIRMEYIDGRPLGKL  102 (201)
T ss_pred             hhhhhhcccccEEEEeecc-CceEEEEEecCCc--chhhHHHHHHHHHHhhhcCCCceEEEechhhhhhhhhcCcchhhh
Confidence            3478999999999999985 4588999876543  34556666664333322221111     11122666666666544


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCC-CCCeEECCCCcEEEEecCcch
Q 006915          484 LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLK-TSNILLDQEMNPKISDFGLAL  538 (626)
Q Consensus       484 l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk-p~NILl~~~~~~kl~DFGla~  538 (626)
                      -....+ +-...+++.---|-..+   |-|..|. |..++|..+..+-|+||--|.
T Consensus       103 ~~~~~r-k~l~~vlE~a~~LD~~G---I~H~El~~~~k~vlv~~~~~~iIDFd~At  154 (201)
T COG2112         103 EIGGDR-KHLLRVLEKAYKLDRLG---IEHGELSRPWKNVLVNDRDVYIIDFDSAT  154 (201)
T ss_pred             hhcccH-HHHHHHHHHHHHHHHhc---cchhhhcCCceeEEecCCcEEEEEccchh
Confidence            332112 22233333322233334   8887775 444444445599999999884

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=95.78  E-value=0.037  Score=54.58  Aligned_cols=30  Identities=27%  Similarity=0.324  Sum_probs=26.8

Q ss_pred             CCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          508 RLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       508 ~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      .+.++|+|+.|.|||++++....|+||+.+
T Consensus       162 ~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a  191 (244)
T cd05150         162 DLVVTHGDACLPNIIVDPGKFSGFIDLGRL  191 (244)
T ss_pred             ceEEECCCCCCccEEEeCCcEEEEEEcccc
Confidence            346899999999999999877899999987

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>PF11883 DUF3403: Domain of unknown function (DUF3403); InterPro: IPR021820 This functionally uncharacterised domain of around 50 amino acids is found in the C terminus of eukaryotic S-locus receptor kinase proteins

Probab=95.33  E-value=0.027  Score=39.62  Aligned_cols=39  Identities=41%  Similarity=0.471  Sum_probs=31.0

Q ss_pred             ccCCCCCCCceeeecCCCCCCCCCCCC----CCCcceeeeeec
Q 006915          587 MNLATPKRPAFVIRRGSSSSASSSNKP----ESNNELTNTLEC  625 (626)
Q Consensus       587 ~~~~~~~~P~~~~~~~~~~~~~~~~~~----~~~~~~~~t~~~  625 (626)
                      ..||.|+.|+|+..+.......++...    -++|++|+|+|+
T Consensus         4 ~~LP~PKqPgF~~~r~~~e~~sSss~~~~~~~SvNevTiT~l~   46 (48)
T PF11883_consen    4 ATLPQPKQPGFFTGRSPSETDSSSSKQRDESCSVNEVTITMLE   46 (48)
T ss_pred             ccCCCCCCCCEEeEcCCCCcCCCcccccCCCCCeeeEEEEeEe
Confidence            579999999999998776665554443    399999999985

; GO: 0004674 protein serine/threonine kinase activity

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=94.91  E-value=0.14  Score=49.98  Aligned_cols=30  Identities=27%  Similarity=0.457  Sum_probs=26.4

Q ss_pred             CCceEecCCCCCCeEECC-CCcEEEEecCcc
Q 006915          508 RLRIIHRDLKTSNILLDQ-EMNPKISDFGLA  537 (626)
Q Consensus       508 ~~~ivHrDlkp~NILl~~-~~~~kl~DFGla  537 (626)
                      ...++|+|+.+.|||+++ +..+.|+||-.|
T Consensus       169 ~~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a  199 (235)
T cd05157         169 PIVFCHNDLLSGNIIYNEEKNSVKFIDYEYA  199 (235)
T ss_pred             CEEEEcCCCCcCcEEEeCCCCCEEEEEcccC
Confidence            346999999999999998 578999999877

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=94.87  E-value=0.074  Score=54.10  Aligned_cols=29  Identities=34%  Similarity=0.484  Sum_probs=26.1

Q ss_pred             CceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          509 LRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       509 ~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ..++|+|+.|.|||++++..+.|.||+.+
T Consensus       175 ~~l~HgD~~~~Nil~~~~~~~~iIDfe~a  203 (296)
T cd05153         175 RGVIHADLFRDNVLFDGDELSGVIDFYFA  203 (296)
T ss_pred             CcCCccCcCcccEEEeCCceEEEeehhhh
Confidence            35999999999999999877899999876

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>smart00108 B_lectin Bulb-type mannose-specific lectin

Probab=94.66  E-value=0.077  Score=45.52  Aligned_cols=76  Identities=17%  Similarity=0.257  Sum_probs=45.2

Q ss_pred             CcccEEEEeCCCCceEEeeCCC-CC-c----ccccCccccC--cceEEEccCCCCCCCccEEEEEc-CCCceeEEecCCe
Q 006915            2 DSGNFVLQDDQVRKNLWESFKY-PT-D----TFLAGMYMGE--NLSLTSWAGHDDPKPGNFTFKMD-QGENQYQITKPLI   72 (626)
Q Consensus         2 dsGNlvl~~~~~~~~lWqSFd~-Pt-D----Tllpgq~l~~--~~~L~S~~s~~d~s~G~~~l~~~-~~~~~~~~~~~~~   72 (626)
                      ..||+|+++.....++|+|-.+ |. +    +|-..-.|..  ...-+-|.+......|.|.+.|+ +|+..++-.. ..
T Consensus        28 ~dgnlV~~~~~~~~~vW~snt~~~~~~~~~l~l~~dGnLvl~~~~g~~vW~S~t~~~~~~~~~~L~ddGnlvl~~~~-~~  106 (114)
T smart00108       28 NDYNLILYKSSSRTVVWVANRDNPVSDSCTLTLQSDGNLVLYDGDGRVVWSSNTTGANGNYVLVLLDDGNLVIYDSD-GN  106 (114)
T ss_pred             CCEEEEEEECCCCcEEEECCCCCCCCCCEEEEEeCCCCEEEEeCCCCEEEEecccCCCCceEEEEeCCCCEEEECCC-CC
Confidence            4799999986424789999653 32 2    1111112211  10124477766666788999999 7777765433 35


Q ss_pred             eEEeeC
Q 006915           73 RHWRSA   78 (626)
Q Consensus        73 ~yw~~~   78 (626)
                      ..|.+.
T Consensus       107 ~~W~Sf  112 (114)
T smart00108      107 FLWQSF  112 (114)
T ss_pred             EEeCCC
Confidence            778653

>KOG4258 consensus Insulin/growth factor receptor (contains protein kinase domain) [Signal transduction mechanisms]

Probab=94.59  E-value=0.034  Score=61.57  Aligned_cols=32  Identities=22%  Similarity=0.388  Sum_probs=25.1

Q ss_pred             cCHHHHHHhhcCccccccccccCeEEEEEEEcC
Q 006915          395 IDFESILAATDNFSEANKLGKGGFGPVYKAKFP  427 (626)
Q Consensus       395 ~~~~~l~~~~~~f~~~~~lG~G~fG~Vy~~~~~  427 (626)
                      +-.+|++...+ ....+.||+|+||.||.|.-+
T Consensus       985 yv~deWe~~r~-it~~relg~gsfg~Vy~g~~n 1016 (1025)
T KOG4258|consen  985 YVPDEWEVSRE-ITLGRELGQGSFGMVYEGNAN 1016 (1025)
T ss_pred             CChhHHHHHHH-HhhhhhhccCccceEEEecCC
Confidence            44566666666 777899999999999999754

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=94.51  E-value=0.049  Score=54.64  Aligned_cols=163  Identities=16%  Similarity=0.187  Sum_probs=84.9

Q ss_pred             ccccccccccCeEEEEEEEcCCCcEEEEEEecCCCcccHHHHHH--------------------------HHHhc-----
Q 006915          407 FSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKN--------------------------EIETS-----  455 (626)
Q Consensus       407 f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~--------------------------e~~~~-----  455 (626)
                      +...+.||-|--+.||.+-...|++.++|.-+..    ...|++                          |+...     
T Consensus        94 ~svGnqIGVGKESDIY~v~d~~G~~~~lK~HRLG----RtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e  169 (465)
T KOG2268|consen   94 ESVGNQIGVGKESDIYVVADEEGNPLILKLHRLG----RTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYE  169 (465)
T ss_pred             hhhccccccccccceEEEecCCCCchhHHHHhhh----hhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHH
Confidence            5667899999999999999999999999864311    111111                          11100     


Q ss_pred             ---cccceecchHHHHH-HhhccccCCCcccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEE
Q 006915          456 ---NSNATIGANVKAFV-REMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKI  531 (626)
Q Consensus       456 ---~~~~~~~~~~~~~~-~~~~~~~~~~l~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl  531 (626)
                         .+..-+..+....+ ..++.++-.......+......-+.++   +.-|..+|   +||+|..--||+++++..+++
T Consensus       170 ~gfpVPkpiD~~RH~Vvmelv~g~Pl~~v~~v~d~~~ly~~lm~~---Iv~la~~G---lIHgDFNEFNimv~dd~~i~v  243 (465)
T KOG2268|consen  170 RGFPVPKPIDHNRHCVVMELVDGYPLRQVRHVEDPPTLYDDLMGL---IVRLANHG---LIHGDFNEFNIMVKDDDKIVV  243 (465)
T ss_pred             cCCCCCCcccccceeeHHHhhcccceeeeeecCChHHHHHHHHHH---HHHHHHcC---ceecccchheeEEecCCCEEE
Confidence               00111111111001 111222222222333444433333333   33444556   999999999999999999999


Q ss_pred             EecCcchhccccccCCCCChHHHHHHHHHHHHhcccCCC-CCCCHHHHHH
Q 006915          532 SDFGLALDMMDQKLHASSKPNEILKCINVGLLCVQEDPN-DRPTMSDVVI  580 (626)
Q Consensus       532 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~p~-~RPs~~~vl~  580 (626)
                      +||--....-.+.....+ ...+..+...-..=+.+.|+ +-|.+.+...
T Consensus       244 IDFPQmvS~sh~nA~~YF-dRDv~Ci~~fFrKkf~YE~edd~~~f~d~~~  292 (465)
T KOG2268|consen  244 IDFPQMVSTSHPNAEYYF-DRDVECIRAFFRKKFGYEPEDDEPKFDDGSD  292 (465)
T ss_pred             eechHhhccCCCccceee-cccHHHHHHHHHHhcCCCCCCCCcccccchh
Confidence            999644222222211111 11222333333344556566 6677777443

>PRK05231 homoserine kinase; Provisional

Probab=94.40  E-value=0.37  Score=49.57  Aligned_cols=29  Identities=31%  Similarity=0.440  Sum_probs=25.6

Q ss_pred             CceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          509 LRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       509 ~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ..++|+|+.|.|||++++...-|+||+.+
T Consensus       187 ~~liHgD~~~~Nil~~~~~~~~iIDf~~~  215 (319)
T PRK05231        187 RGVIHADLFRDNVLFEGDRLSGFIDFYFA  215 (319)
T ss_pred             cccCCCCCCCCcEEEECCceEEEEecccc
Confidence            35999999999999997766689999987

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=94.39  E-value=0.21  Score=51.84  Aligned_cols=48  Identities=15%  Similarity=0.356  Sum_probs=44.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEec
Q 006915          484 LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDF  534 (626)
Q Consensus       484 l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DF  534 (626)
                      ..|.-.++.+..+|.+.+-||+.+   .+-+|+.++|+|+.+++.+.|.|-
T Consensus       114 ~~w~fllrvaRnlA~aFA~lH~~G---h~vGDVn~~~~lVsd~~~V~LVds  161 (637)
T COG4248         114 CAWDFLLRVARNLASAFATLHEHG---HVVGDVNQNSFLVSDDSKVVLVDS  161 (637)
T ss_pred             cccHHHHHHHHHHHHHHHHHHhcC---CcccccCccceeeecCceEEEEcc
Confidence            568889999999999999999998   888999999999999999888863

>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]

Probab=94.27  E-value=0.071  Score=35.52  Aligned_cols=30  Identities=13%  Similarity=0.424  Sum_probs=16.2

Q ss_pred             cceEEEEeehHHHHHHHHHHHHhheeeeec
Q 006915          319 HQWTLIFGMTIASGIILSCIIIYFYTRRKR  348 (626)
Q Consensus       319 ~~~~ii~~~~~~~~~~~~~~~~~~~~~r~r  348 (626)
                      ....+.+++++..+++++++++++++++||
T Consensus         9 ~~vaIa~~VvVPV~vI~~vl~~~l~~~~rR   38 (40)
T PF08693_consen    9 NTVAIAVGVVVPVGVIIIVLGAFLFFWYRR   38 (40)
T ss_pred             ceEEEEEEEEechHHHHHHHHHHhheEEec
Confidence            345566666666655555555555544433

This entry represents the highly conserved transmembrane alpha-helical domain found in these proteins [, ]. The full-length AXL2 protein has a negative regulatory function in cytokinesis [].

>smart00108 B_lectin Bulb-type mannose-specific lectin

Probab=93.90  E-value=0.32  Score=41.64  Aligned_cols=99  Identities=14%  Similarity=0.085  Sum_probs=49.5

Q ss_pred             ccCcceEEEccCCCCCCCccEEEEEc-CCCceeEEecCCeeEEeeCCcCCccccccccccceeceeeeeeeeecCCCCce
Q 006915           34 MGENLSLTSWAGHDDPKPGNFTFKMD-QGENQYQITKPLIRHWRSAESKDVFSSNEIIPYQILNLLSNFSHSVKPTGKNA  112 (626)
Q Consensus        34 l~~~~~L~S~~s~~d~s~G~~~l~~~-~~~~~~~~~~~~~~yw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  112 (626)
                      |..++.|+|  .....+.|+|++.++ ++...++......++|.+........    ...........+......  ...
T Consensus         4 l~~~~~l~s--~~~~f~~G~~~~~~q~dgnlV~~~~~~~~~vW~snt~~~~~~----~~~l~l~~dGnLvl~~~~--g~~   75 (114)
T smart00108        4 LSSGQTLVS--GNSLFELGFFTLIMQNDYNLILYKSSSRTVVWVANRDNPVSD----SCTLTLQSDGNLVLYDGD--GRV   75 (114)
T ss_pred             cCCCCEEec--CCCcEeeeccccCCCCCEEEEEEECCCCcEEEECCCCCCCCC----CEEEEEeCCCCEEEEeCC--CCE
Confidence            344455555  223347899999998 55554443322468998766543200    000011101112211220  122


Q ss_pred             eEEEEEecCCCceeEEEEEeecccEEEEEe
Q 006915          113 VHPNLIVPSIDYSRTRLIMNYTGEIQYWTE  142 (626)
Q Consensus       113 ~~~~~~~~~~~~~~~rl~l~~dG~l~~~~~  142 (626)
                      ++.+-.. . .....+++|..||+|.+|..
T Consensus        76 vW~S~t~-~-~~~~~~~~L~ddGnlvl~~~  103 (114)
T smart00108       76 VWSSNTT-G-ANGNYVLVLLDDGNLVIYDS  103 (114)
T ss_pred             EEEeccc-C-CCCceEEEEeCCCCEEEECC
Confidence            2322221 1 23467899999999999864

>cd00028 B_lectin Bulb-type mannose-specific lectin

Probab=93.41  E-value=0.19  Score=43.23  Aligned_cols=75  Identities=16%  Similarity=0.272  Sum_probs=38.8

Q ss_pred             cccEEEEeCCCCceEEeeCCC-CCc-----ccccCcccc--CcceEEEccCCCCCCCccEEEEEc-CCCceeEEecCCee
Q 006915            3 SGNFVLQDDQVRKNLWESFKY-PTD-----TFLAGMYMG--ENLSLTSWAGHDDPKPGNFTFKMD-QGENQYQITKPLIR   73 (626)
Q Consensus         3 sGNlvl~~~~~~~~lWqSFd~-PtD-----Tllpgq~l~--~~~~L~S~~s~~d~s~G~~~l~~~-~~~~~~~~~~~~~~   73 (626)
                      .||||+++.....++|.|--+ |.+     +|-..-.|.  ....-+-|.+....+.+.+.+.|+ +|+..++-.. ..+
T Consensus        30 dgnlv~~~~~~~~~vW~snt~~~~~~~~~l~l~~dGnLvl~~~~g~~vW~S~~~~~~~~~~~~L~ddGnlvl~~~~-~~~  108 (116)
T cd00028          30 DYNLILYKGSSRTVVWVANRDNPSGSSCTLTLQSDGNLVIYDGSGTVVWSSNTTRVNGNYVLVLLDDGNLVLYDSD-GNF  108 (116)
T ss_pred             eEEEEEEeCCCCeEEEECCCCCCCCCCEEEEEecCCCeEEEcCCCcEEEEecccCCCCceEEEEeCCCCEEEECCC-CCE
Confidence            789999975424689998643 211     000111111  101123355544434667777777 6666655433 355


Q ss_pred             EEeeC
Q 006915           74 HWRSA   78 (626)
Q Consensus        74 yw~~~   78 (626)
                      .|.+.
T Consensus       109 ~W~Sf  113 (116)
T cd00028         109 LWQSF  113 (116)
T ss_pred             EEcCC
Confidence            66653

The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses.

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=93.40  E-value=0.32  Score=53.34  Aligned_cols=44  Identities=16%  Similarity=0.365  Sum_probs=40.6

Q ss_pred             HHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          492 IIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       492 i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      .+.||+.||.|||+.+  .++|++|.-..|.++..|.-||.+|-++
T Consensus       109 Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v  152 (690)
T KOG1243|consen  109 GLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELV  152 (690)
T ss_pred             HHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEE
Confidence            5789999999999776  5999999999999999999999999877

>PLN02876 acyl-CoA dehydrogenase

Probab=93.38  E-value=0.5  Score=55.42  Aligned_cols=28  Identities=25%  Similarity=0.436  Sum_probs=23.3

Q ss_pred             ceEecCCCCCCeEECCC-C-cEEEEecCcc
Q 006915          510 RIIHRDLKTSNILLDQE-M-NPKISDFGLA  537 (626)
Q Consensus       510 ~ivHrDlkp~NILl~~~-~-~~kl~DFGla  537 (626)
                      .+||+|+++.|||++.+ . .+-|.||.++
T Consensus       226 ~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a  255 (822)
T PLN02876        226 GIVHGDFRIDNLVFHPTEDRVIGILDWELS  255 (822)
T ss_pred             ceEecCcccccEEEcCCCCeEEEEEeeecc
Confidence            49999999999999753 3 3579999987

>PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity

Probab=92.95  E-value=0.31  Score=41.79  Aligned_cols=51  Identities=20%  Similarity=0.299  Sum_probs=32.0

Q ss_pred             CcccEEEEeCCCCceEEeeCCCCCcccccCccccCcceEEEccCCCCCCCccEEEEEc-CCCceeEEecCCeeEEee
Q 006915            2 DSGNFVLQDDQVRKNLWESFKYPTDTFLAGMYMGENLSLTSWAGHDDPKPGNFTFKMD-QGENQYQITKPLIRHWRS   77 (626)
Q Consensus         2 dsGNlvl~~~~~~~~lWqSFd~PtDTllpgq~l~~~~~L~S~~s~~d~s~G~~~l~~~-~~~~~~~~~~~~~~yw~~   77 (626)
                      ++|||||++.. +.++|+|  .                     .........+.+.|+ +|+..++- ......|.+
T Consensus        27 ~dGnLvl~~~~-~~~iWss--~---------------------~t~~~~~~~~~~~L~~~GNlvl~d-~~~~~lW~S   78 (114)
T PF01453_consen   27 SDGNLVLYDSN-GSVIWSS--N---------------------NTSGRGNSGCYLVLQDDGNLVLYD-SSGNVLWQS   78 (114)
T ss_dssp             TTSEEEEEETT-TEEEEE-------------------------S-TTSS-SSEEEEEETTSEEEEEE-TTSEEEEES
T ss_pred             CCCeEEEEcCC-CCEEEEe--c---------------------ccCCccccCeEEEEeCCCCEEEEe-ecceEEEee
Confidence            58999999977 6789999  0                     000011136778888 66666553 467788876

Each bulb-type lectin domain consists of three sequential beta-sheet subdomains (I, II, III) that are inter-related by pseudo three-fold symmetry. The three subdomains are flat four-stranded, antiparrallel beta-sheets. Together they form a 12-stranded beta-barrel in which the barrel axis coincides with the pseudo 3-fold axis.; GO: 0005529 sugar binding; PDB: 3M7H_A 3M7J_B 3MEZ_D 1DLP_A 1BWU_D 1KJ1_A 1B2P_A 1XD6_A 2DPF_C 2D04_B ....

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=92.77  E-value=0.67  Score=49.01  Aligned_cols=29  Identities=31%  Similarity=0.493  Sum_probs=25.0

Q ss_pred             CCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          508 RLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       508 ~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ...++|+|+.+.|||+.++ .++|+||-++
T Consensus       222 ~~~l~HgDl~~gni~~~~~-~~~viD~E~a  250 (401)
T PRK09550        222 AEALLHGDLHTGSIFVTEE-ETKVIDPEFA  250 (401)
T ss_pred             CCceeeccCCcccEEeeCC-CcEEEecccc
Confidence            4469999999999999776 5999999766

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=92.40  E-value=0.15  Score=56.04  Aligned_cols=43  Identities=21%  Similarity=0.568  Sum_probs=38.3

Q ss_pred             HHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          493 IIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       493 ~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +.+++.||.|+|...  .+||++|.|++|.++.++..||+-|+.+
T Consensus       105 l~~v~dgl~flh~sA--k~VH~ni~p~~i~~na~~~wkl~Gf~f~  147 (700)
T KOG2137|consen  105 LGNVADGLAFLHRSA--KVVHGNIQPEAIVVNANGDWKLAGFSFC  147 (700)
T ss_pred             hhcccchhhhhccCc--ceeecccchhheeeccCcceeeccchhh
Confidence            445669999999764  6999999999999999999999999886

>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]

Probab=92.37  E-value=0.79  Score=47.11  Aligned_cols=124  Identities=22%  Similarity=0.221  Sum_probs=80.1

Q ss_pred             ccccccCeEEEEEEEcCCCcEEEEEEecCC-----C-------------------cccHHHHHHHHHhccccceecchHH
Q 006915          411 NKLGKGGFGPVYKAKFPGGQQIAVKRLSSA-----S-------------------GQGLEEFKNEIETSNSNATIGANVK  466 (626)
Q Consensus       411 ~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~-----~-------------------~~~~~~~~~e~~~~~~~~~~~~~~~  466 (626)
                      -.|..|--.-||.+.-.+|..+|||+.+..     +                   .........|-+..|+.++....+.
T Consensus       150 GCiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~aGIP  229 (520)
T KOG2270|consen  150 GCISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNAGIP  229 (520)
T ss_pred             cccccCccceeEeeecCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            467788889999999999999999987521     0                   0111223345555555555433222


Q ss_pred             --------HHHHhhcccc-----CCCccc-CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEE
Q 006915          467 --------AFVREMKTFS-----DPTLSA-LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKIS  532 (626)
Q Consensus       467 --------~~~~~~~~~~-----~~~l~~-~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~  532 (626)
                              ..+.+|+++.     .+.|.. .|+......+-.+++.-|.-|-..+  ++||.||.--|+|+- +|.+.|+
T Consensus       230 ~PePIlLk~hVLVM~FlGrdgw~aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c--~LVHADLSEfN~Lyh-dG~lyiI  306 (520)
T KOG2270|consen  230 CPEPILLKNHVLVMEFLGRDGWAAPKLKDASLSTSKARELYQQCVRIMRRLYQKC--RLVHADLSEFNLLYH-DGKLYII  306 (520)
T ss_pred             CCCceeeecceEeeeeccCCCCcCcccccccCChHHHHHHHHHHHHHHHHHHHHh--ceeccchhhhhheEE-CCEEEEE
Confidence                    1223333332     222222 2455566677788888888887766  599999999999985 5678999


Q ss_pred             ecCcc
Q 006915          533 DFGLA  537 (626)
Q Consensus       533 DFGla  537 (626)
                      |-+-+
T Consensus       307 DVSQS  311 (520)
T KOG2270|consen  307 DVSQS  311 (520)
T ss_pred             Ecccc
Confidence            98877

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=92.10  E-value=0.78  Score=43.53  Aligned_cols=30  Identities=17%  Similarity=0.459  Sum_probs=22.7

Q ss_pred             cccccccCeEEEEEEEcCCCcEEEEEEecCCC
Q 006915          410 ANKLGKGGFGPVYKAKFPGGQQIAVKRLSSAS  441 (626)
Q Consensus       410 ~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~  441 (626)
                      ...||+|+.=.||.  +++.....||++....
T Consensus         6 ~~~i~~G~~R~cy~--HP~dp~~cIKV~~~~~   35 (199)
T PF10707_consen    6 SDLIAQGGERDCYQ--HPDDPNLCIKVMRPDR   35 (199)
T ss_pred             CcccccCCCceEEE--CCCCCCeEEEEEcccc
Confidence            35899999999985  5556677888887544

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>PRK10593 hypothetical protein; Provisional

Probab=91.88  E-value=1.8  Score=44.00  Aligned_cols=28  Identities=14%  Similarity=0.253  Sum_probs=22.2

Q ss_pred             CCceEecCCCCCCeEECCC-Cc-EEEEecC
Q 006915          508 RLRIIHRDLKTSNILLDQE-MN-PKISDFG  535 (626)
Q Consensus       508 ~~~ivHrDlkp~NILl~~~-~~-~kl~DFG  535 (626)
                      .+.++|+|+.+.||+++.+ +. +-|.|..
T Consensus       192 ~psLlHGDlw~gNvl~~~~~~~i~~liDPa  221 (297)
T PRK10593        192 NCVLVHGNFTLRSMLKDPRSDQLLAMLNPG  221 (297)
T ss_pred             CCeeEeCCCCcccEEECCCCCceEEEECch
Confidence            4679999999999999865 43 6677765

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=91.36  E-value=0.37  Score=49.14  Aligned_cols=31  Identities=35%  Similarity=0.426  Sum_probs=27.3

Q ss_pred             CCCceEecCCCCCCeEECCC----CcEEEEecCcc
Q 006915          507 SRLRIIHRDLKTSNILLDQE----MNPKISDFGLA  537 (626)
Q Consensus       507 ~~~~ivHrDlkp~NILl~~~----~~~kl~DFGla  537 (626)
                      ....++|+|+.+.|||++++    +.+.|+||..|
T Consensus       177 ~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya  211 (302)
T cd05156         177 SPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYA  211 (302)
T ss_pred             CCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCC
Confidence            34569999999999999985    88999999987

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>cd00028 B_lectin Bulb-type mannose-specific lectin

Probab=91.34  E-value=0.82  Score=39.24  Aligned_cols=100  Identities=13%  Similarity=0.060  Sum_probs=46.8

Q ss_pred             ccCcceEEEccCCCCCCCccEEEEEcC-C-CceeEEecCCeeEEeeCCcCCccccccccccceeceeeeeeeeecCCCCc
Q 006915           34 MGENLSLTSWAGHDDPKPGNFTFKMDQ-G-ENQYQITKPLIRHWRSAESKDVFSSNEIIPYQILNLLSNFSHSVKPTGKN  111 (626)
Q Consensus        34 l~~~~~L~S~~s~~d~s~G~~~l~~~~-~-~~~~~~~~~~~~yw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  111 (626)
                      |..+..|+|  ....++.|+|++.++. . ...++.......+|.+...... ..   ...........+...+.  ...
T Consensus         4 l~~~~~l~s--~~~~f~~G~~~~~~q~~dgnlv~~~~~~~~~vW~snt~~~~-~~---~~~l~l~~dGnLvl~~~--~g~   75 (116)
T cd00028           4 LSSGQTLVS--SGSLFELGFFKLIMQSRDYNLILYKGSSRTVVWVANRDNPS-GS---SCTLTLQSDGNLVIYDG--SGT   75 (116)
T ss_pred             cCCCCEEEe--CCCcEEEecccCCCCCCeEEEEEEeCCCCeEEEECCCCCCC-CC---CEEEEEecCCCeEEEcC--CCc
Confidence            344444554  2234457899998884 2 2222222223678987654321 00   00011110111222221  012


Q ss_pred             eeEEEEEecCCCceeEEEEEeecccEEEEEec
Q 006915          112 AVHPNLIVPSIDYSRTRLIMNYTGEIQYWTED  143 (626)
Q Consensus       112 ~~~~~~~~~~~~~~~~rl~l~~dG~l~~~~~~  143 (626)
                      .++.+-...  .....+++|..||+|.+|...
T Consensus        76 ~vW~S~~~~--~~~~~~~~L~ddGnlvl~~~~  105 (116)
T cd00028          76 VVWSSNTTR--VNGNYVLVLLDDGNLVLYDSD  105 (116)
T ss_pred             EEEEecccC--CCCceEEEEeCCCCEEEECCC
Confidence            222222211  134678999999999998753

The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses.

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=90.20  E-value=0.43  Score=46.67  Aligned_cols=30  Identities=27%  Similarity=0.372  Sum_probs=25.8

Q ss_pred             CCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          508 RLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       508 ~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      .+.++|+|+.+.|||++++...-|+||+.+
T Consensus       163 ~~~l~HGD~~~~Nvlv~~~~i~giIDw~~a  192 (235)
T cd05155         163 PPVWFHGDLAPGNLLVQDGRLSAVIDFGCL  192 (235)
T ss_pred             CceEEeCCCCCCcEEEECCCEEEEEeCccc
Confidence            345999999999999987766789999986

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=90.08  E-value=0.47  Score=48.57  Aligned_cols=30  Identities=33%  Similarity=0.465  Sum_probs=26.8

Q ss_pred             CCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          508 RLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       508 ~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +..++|+|+.+.||++++++...|+||+.+
T Consensus       186 ~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~  215 (307)
T TIGR00938       186 PRGVIHADLFPDNVLFDGDSVKGVIDFYFA  215 (307)
T ss_pred             CCccCCCCCCcCcEEEECCceEEEeecccc
Confidence            346999999999999998887789999987

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>PRK10271 thiK thiamine kinase; Provisional

Probab=89.03  E-value=0.34  Score=45.29  Aligned_cols=27  Identities=19%  Similarity=0.332  Sum_probs=24.6

Q ss_pred             ceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          510 RIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       510 ~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ..+|+|+.|.||++++++ ++|+||+.|
T Consensus        78 ~p~H~D~~~~N~~~~~~~-~~lIDwe~a  104 (188)
T PRK10271         78 APLHMDVHAGNLVHSASG-LRLIDWEYA  104 (188)
T ss_pred             eeecCCCCCccEEEECCC-EEEEeCCcc
Confidence            479999999999998877 999999988

>PRK06148 hypothetical protein; Provisional

Probab=88.97  E-value=1.9  Score=51.68  Aligned_cols=30  Identities=37%  Similarity=0.540  Sum_probs=25.2

Q ss_pred             CCceEecCCCCCCeEECCCC--cEE-EEecCcc
Q 006915          508 RLRIIHRDLKTSNILLDQEM--NPK-ISDFGLA  537 (626)
Q Consensus       508 ~~~ivHrDlkp~NILl~~~~--~~k-l~DFGla  537 (626)
                      +..+||.|+.+.|||++.+.  .+. |+|||-+
T Consensus       202 p~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa  234 (1013)
T PRK06148        202 PAQVIHNDANDYNILVDADDGERISGLIDFGDA  234 (1013)
T ss_pred             CcceECCCCCcccEEEcCCCCcceEEEEECccc
Confidence            34599999999999999875  454 9999987

>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []

Probab=88.48  E-value=0.15  Score=43.99  Aligned_cols=30  Identities=23%  Similarity=0.410  Sum_probs=27.8

Q ss_pred             ccccccCeEEEEEEEcCCCcEEEEEEecCC
Q 006915          411 NKLGKGGFGPVYKAKFPGGQQIAVKRLSSA  440 (626)
Q Consensus       411 ~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~  440 (626)
                      +.||.|+.|+||+|++++|+.||||+.++.
T Consensus        17 ~PlasASiaQVh~a~l~~g~~VaVKV~rP~   46 (119)
T PF03109_consen   17 EPLASASIAQVHRARLKDGEEVAVKVQRPG   46 (119)
T ss_pred             chhhheehhhheeeeecccchhhhhhcchH
Confidence            689999999999999999999999998764

These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.

>PF08277 PAN_3: PAN-like domain; InterPro: IPR006583 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions []

Probab=87.92  E-value=3.1  Score=31.91  Aligned_cols=32  Identities=22%  Similarity=0.526  Sum_probs=27.3

Q ss_pred             CCCChHHHHHHhccCCCEEEEeeccccccCCCCCeEEec
Q 006915          231 PVASEAECSKKCRGFCPCTAYSYKESKRRDEAGTCCIWI  269 (626)
Q Consensus       231 ~~~s~~~C~~~Cl~~CsC~a~~y~~~~~~~~~~~C~~~~  269 (626)
                      ...+.++|-..|..+=.|..+++.       .+.|+++.
T Consensus        18 ~~~sw~~Cv~~C~~~~~C~la~~~-------~~~C~~y~   49 (71)
T PF08277_consen   18 TNTSWDDCVQKCYNDENCVLAYFD-------SGKCYLYN   49 (71)
T ss_pred             cCCCHHHHhHHhCCCCEEEEEEeC-------CCCEEEEE
Confidence            567899999999999999998884       46898864

These domains contain a hair-pin loop like structure, similar to knottins, but the pattern of disulphide bonds differs The PAN-3 or CW is a domain associated with a number of Caenorhabditis elegans hypothetical proteins.

>PHA03111 Ser/Thr kinase; Provisional

Probab=87.39  E-value=1.5  Score=44.49  Aligned_cols=33  Identities=30%  Similarity=0.354  Sum_probs=21.1

Q ss_pred             HHHHHHHHHHHHHHh-CCCCceEecCCCCCCeEE
Q 006915          491 NIIIGIARGLLYLHQ-DSRLRIIHRDLKTSNILL  523 (626)
Q Consensus       491 ~i~~~ia~gL~yLH~-~~~~~ivHrDlkp~NILl  523 (626)
                      .+..|||-=.-.+-+ .+...++|-||||.||||
T Consensus       283 fifLQiaLLyikIYelp~c~nF~H~DLKPdNILi  316 (444)
T PHA03111        283 FIFLQIALLYIKIYELPCCDNFLHVDLKPDNILI  316 (444)
T ss_pred             HHHHHHHHHHHhhhcCCCcceeeeccCCCCcEEE
Confidence            466677533322311 223458999999999999

>TIGR02721 ycfN_thiK thiamine kinase

Probab=86.97  E-value=0.49  Score=46.97  Aligned_cols=28  Identities=25%  Similarity=0.402  Sum_probs=25.0

Q ss_pred             CceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          509 LRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       509 ~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +.++|+|+.|.|||+++++ +.|+||..|
T Consensus       146 ~~l~H~Dl~~~Nil~~~~~-~~lIDwE~a  173 (256)
T TIGR02721       146 LAPLHMDVHAYNLVVTPQG-LKLIDWEYA  173 (256)
T ss_pred             CeeecCCCCcCcEEEeCCC-CEEEecccc
Confidence            4589999999999999877 789999887

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>PRK12396 5-methylribose kinase; Reviewed

Probab=86.79  E-value=4.6  Score=42.56  Aligned_cols=28  Identities=29%  Similarity=0.519  Sum_probs=24.1

Q ss_pred             CceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          509 LRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       509 ~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ...+|+||.|.||+++++ ..|++|.-+|
T Consensus       227 ~aLlHGDlHtGSI~v~~~-~~kvIDpEFA  254 (409)
T PRK12396        227 QALIHGDLHTGSVFVKND-STKVIDPEFA  254 (409)
T ss_pred             hhhccCcCCCCCEEecCC-ceEEEccccc
Confidence            359999999999999976 5899997666

>PF00024 PAN_1: PAN domain This Prosite entry concerns apple domains, a subset of PAN domains; InterPro: IPR003014 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions []

Probab=86.46  E-value=0.74  Score=36.03  Aligned_cols=53  Identities=19%  Similarity=0.379  Sum_probs=38.1

Q ss_pred             ceeEeeeeecCCCCCC-CCCCChHHHHHHhccCCC-EEEEeeccccccCCCCCeEEeccc
Q 006915          214 MFLKRQITKVGETDSC-LPVASEAECSKKCRGFCP-CTAYSYKESKRRDEAGTCCIWIEE  271 (626)
Q Consensus       214 ~f~~~~~~~~~~~~~~-~~~~s~~~C~~~Cl~~Cs-C~a~~y~~~~~~~~~~~C~~~~~~  271 (626)
                      .|..+.+..+...... ....++++|...|+.+=. |.+|.|..     ....|.+....
T Consensus         3 ~f~~~~~~~l~~~~~~~~~v~s~~~C~~~C~~~~~~C~s~~y~~-----~~~~C~L~~~~   57 (79)
T PF00024_consen    3 AFERIPGYRLSGHSIKEINVPSLEECAQLCLNEPRRCKSFNYDP-----SSKTCYLSSSD   57 (79)
T ss_dssp             TEEEEEEEEEESCEEEEEEESSHHHHHHHHHHSTT-ESEEEEET-----TTTEEEEECSS
T ss_pred             CeEEECCEEEeCCcceEEcCCCHHHHHhhcCcCcccCCeEEEEC-----CCCEEEEcCCC
Confidence            3667777777332111 144589999999999999 99999973     45689986543

These domains contain a hair-pin loop like structure, similar to knottins, but the pattern of disulphide bonds differs It has been shown that, the N-terminal N domains of members of the plasminogen/hepatocyte growth factor family, the apple domains of the plasma prekallikrein/coagulation factor XI family, and domains of various nematode proteins belong to the same module superfamily, the PAN module []. PAN contains a conserved core of three disulphide bridges. In some members of the family there is an additional fourth disulphide bridge that links the N and C termini of the domain.; PDB: 1GP9_C 2QJ2_B 1GMO_H 1NK1_B 3MKP_B 1BHT_B 3HN4_A 1GMN_A 3HMS_A 3HMT_B ....

>PF14295 PAN_4: PAN domain; PDB: 2YIL_E 2YIP_C 2YIO_A

Probab=85.93  E-value=0.6  Score=33.13  Aligned_cols=38  Identities=21%  Similarity=0.530  Sum_probs=18.2

Q ss_pred             CCCChHHHHHHhccCCCEEEEeeccccccCCCCCeEEe
Q 006915          231 PVASEAECSKKCRGFCPCTAYSYKESKRRDEAGTCCIW  268 (626)
Q Consensus       231 ~~~s~~~C~~~Cl~~CsC~a~~y~~~~~~~~~~~C~~~  268 (626)
                      ...+.++|.++|..+=.|.++.|.........+.|+|+
T Consensus        14 ~~~s~~~C~~~C~~~~~C~~~~~~~~~~~~~~~~C~LK   51 (51)
T PF14295_consen   14 TASSPEECQAACAADPGCQAFTFNPPGCPSSSGRCYLK   51 (51)
T ss_dssp             ----HHHHHHHHHTSTT--EEEEETTEE----------
T ss_pred             cCCCHHHHHHHccCCCCCCEEEEECCCcccccccccCC
Confidence            45689999999999999999999742111244568774

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=85.72  E-value=1.4  Score=45.05  Aligned_cols=28  Identities=29%  Similarity=0.382  Sum_probs=24.7

Q ss_pred             CceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          509 LRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       509 ~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ..++|+|+.+.|||++. +.+.|+||+.+
T Consensus       187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~  214 (313)
T TIGR02906       187 RGFCHQDYAYHNILLKD-NEVYVIDFDYC  214 (313)
T ss_pred             CceEcCCCCcccEEEeC-CcEEEEECccc
Confidence            45899999999999987 67899999965

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	626
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		4e-20
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		2e-19
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		3e-16
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		3e-16
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		1e-12
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		1e-12
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		1e-12
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		1e-12
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		1e-12
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		1e-12
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		1e-12
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		1e-12
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		1e-12
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		1e-12
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		1e-12
4h58_A	275	Braf In Complex With Compound 3 Length = 275		1e-12
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		1e-12
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		7e-12
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		7e-12
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		8e-12
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		2e-11
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		6e-10
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		6e-09
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		5e-08
4bcf_A	331	Structure Of Cdk9 In Complex With Cyclin T And A 2-		9e-08
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		2e-07
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		2e-07
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		2e-07
4ec8_A	373	Structure Of Full Length Cdk9 In Complex With Cycli		2e-07
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		2e-07
3mi9_A	351	Crystal Structure Of Hiv-1 Tat Complexed With Human		3e-07
3blh_A	331	Crystal Structure Of Human Cdk9CYCLINT1 Length = 33		3e-07
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		3e-07
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		4e-07
3aln_A	327	Crystal Structure Of Human Non-Phosphorylated Mkk4		4e-07
3pls_A	298	Ron In Complex With Ligand Amp-Pnp Length = 298		5e-07
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		5e-07
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		5e-07
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		6e-07
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		8e-07
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		1e-06
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		1e-06
3q4t_A	322	Crystal Structure Of Activin Receptor Type-Iia (Acv		1e-06
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		1e-06
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		1e-06
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		1e-06
3vn9_A	340	Rifined Crystal Structure Of Non-Phosphorylated Map		1e-06
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		1e-06
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		1e-06
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		1e-06
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		1e-06
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		1e-06
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		1e-06
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		1e-06
3fme_A	290	Crystal Structure Of Human Mitogen-Activated Protei		1e-06
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		2e-06
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		2e-06
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		2e-06
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		2e-06
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		2e-06
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		2e-06
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		2e-06
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		2e-06
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		2e-06
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		2e-06
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		2e-06
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		2e-06
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		2e-06
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		2e-06
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		2e-06
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		2e-06
3enm_A	316	The Structure Of The Map2k Mek6 Reveals An Autoinhi		2e-06
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		2e-06
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		2e-06
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		2e-06
2r4b_A	321	Erbb4 Kinase Domain Complexed With A Thienopyrimidi		3e-06
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		3e-06
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		3e-06
3bbt_B	328	Crystal Structure Of The Erbb4 Kinase In Complex Wi		3e-06
1omw_A	689	Crystal Structure Of The Complex Between G Protein-		3e-06
3psc_A	695	Bovine Grk2 In Complex With Gbetagamma Subunits Len		3e-06
3krw_A	688	Human Grk2 In Complex With Gbetgamma Subunits And B		3e-06
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		3e-06
3cik_A	689	Human Grk2 In Complex With Gbetagamma Subunits Leng		3e-06
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		3e-06
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		4e-06
1b6c_B	342	Crystal Structure Of The Cytoplasmic Domain Of The		4e-06
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		4e-06
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		4e-06
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		4e-06
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		4e-06
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		5e-06
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		5e-06
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		5e-06
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		5e-06
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		5e-06
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		5e-06
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		5e-06
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		5e-06
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		5e-06
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		5e-06
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		5e-06
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		5e-06
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		5e-06
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		6e-06
3pjc_A	315	Crystal Structure Of Jak3 Complexed With A Potent A		6e-06
3lxk_A	327	Structural And Thermodynamic Characterization Of Th		6e-06
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		7e-06
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		7e-06
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		7e-06
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		7e-06
4hvd_A	314	Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h		7e-06
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		7e-06
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		8e-06
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		9e-06
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		1e-05
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		1e-05
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		1e-05
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		1e-05
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		1e-05
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		1e-05
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		1e-05
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		1e-05
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		1e-05
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		2e-05
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		2e-05
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		2e-05
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		2e-05
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		2e-05
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		2e-05
2oza_B	366	Structure Of P38alpha Complex Length = 366		2e-05
2g15_A	318	Structural Characterization Of Autoinhibited C-Met		2e-05
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		2e-05
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		2e-05
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		2e-05
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		2e-05
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		2e-05
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		2e-05
3a4o_X	286	Lyn Kinase Domain Length = 286		2e-05
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		2e-05
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		2e-05
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		2e-05
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		2e-05
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		3e-05
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		3e-05
4gg5_A	319	Crystal Structure Of Cmet In Complex With Novel Inh		3e-05
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		3e-05
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		3e-05
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		3e-05
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		3e-05
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		3e-05
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		3e-05
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		3e-05
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		3e-05
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		3e-05
3hec_A	348	P38 In Complex With Imatinib Length = 348		3e-05
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		3e-05
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		3e-05
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		3e-05
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		3e-05
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		3e-05
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		3e-05
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		3e-05
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		3e-05
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		4e-05
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		4e-05
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		4e-05
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		4e-05
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		4e-05
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		4e-05
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		4e-05
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		4e-05
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		4e-05
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		4e-05
4hjo_A	337	Crystal Structure Of The Inactive Egfr Tyrosine Kin		4e-05
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		4e-05
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		4e-05
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		4e-05
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		4e-05
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		4e-05
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		4e-05
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		4e-05
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		4e-05
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		4e-05
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		4e-05
4ic7_A	442	Crystal Structure Of The Erk5 Kinase Domain In Comp		4e-05
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		4e-05
2j5f_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		4e-05
4b99_A	398	Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le		4e-05
3bel_A	315	X-Ray Structure Of Egfr In Complex With Oxime Inhib		4e-05
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		4e-05
1yvj_A	290	Crystal Structure Of The Jak3 Kinase Domain In Comp		4e-05
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		4e-05
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		4e-05
4g5j_A	330	Crystal Structure Of Egfr Kinase In Complex With Bi		4e-05
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		4e-05
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		4e-05
1xkk_A	352	Egfr Kinase Domain Complexed With A Quinazoline Inh		4e-05
3lzb_A	327	Egfr Kinase Domain Complexed With An Imidazo[2,1-B]		4e-05
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		4e-05
4i23_A	329	Crystal Structure Of The Wild-type Egfr Kinase Doma		4e-05
3vjo_A	334	Crystal Structure Of The Wild-Type Egfr Kinase Doma		4e-05
3ika_A	331	Crystal Structure Of Egfr 696-1022 T790m Mutant Cov		5e-05
1m14_A	333	Tyrosine Kinase Domain From Epidermal Growth Factor		5e-05
2gs7_A	330	Crystal Structure Of The Inactive Egfr Kinase Domai		5e-05
2j5e_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		5e-05
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		5e-05
2gs2_A	330	Crystal Structure Of The Active Egfr Kinase Domain		5e-05
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		5e-05
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		5e-05
3g51_A	325	Structural Diversity Of The Active Conformation Of		5e-05
2jiu_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		5e-05
2jit_A	327	Crystal Structure Of Egfr Kinase Domain T790m Mutat		5e-05
2rfn_A	310	X-ray Structure Of C-met With Inhibitor. Length = 3		5e-05
4g5p_A	330	Crystal Structure Of Egfr Kinase T790m In Complex W		5e-05
4i24_A	329	Structure Of T790m Egfr Kinase Domain Co-crystalliz		5e-05
2jiv_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		5e-05
3i5n_A	309	Crystal Structure Of C-Met With Triazolopyridazine		5e-05
3f66_A	298	Human C-Met Kinase In Complex With Quinoxaline Inhi		6e-05
3q6u_A	308	Structure Of The Apo Met Receptor Kinase In The Dua		6e-05
3lq8_A	302	Structure Of The Kinase Domain Of C-Met Bound To Xl		6e-05
2wgj_A	306	X-Ray Structure Of Pf-02341066 Bound To The Kinase		6e-05
3g2f_A	336	Crystal Structure Of The Kinase Domain Of Bone Morp		7e-05
3h9r_A	330	Crystal Structure Of The Kinase Domain Of Type I Ac		7e-05
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		7e-05
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		7e-05
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		7e-05
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		7e-05
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		8e-05
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		8e-05
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		8e-05
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		8e-05
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		8e-05
2wd1_A	292	Human C-Met Kinase In Complex With Azaindole Inhibi		8e-05
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		8e-05
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		8e-05
3dkg_A	317	Sgx Clone 5698a109kfg1h1 Length = 317		9e-05
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		9e-05
3mtf_A	301	Crystal Structure Of The Acvr1 Kinase In Complex Wi		9e-05
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		9e-05
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		9e-05
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		9e-05
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		9e-05
2rfd_A	324	Crystal Structure Of The Complex Between The Egfr K		9e-05
4dym_A	301	Crystal Structure Of The Acvr1 Kinase Domain In Com		9e-05
3q6w_A	307	Structure Of Dually-phosphorylated Met Receptor Kin		9e-05
2a19_B	284	Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng		9e-05
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		1e-04
1zyc_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		1e-04
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		1e-04
1zy4_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		1e-04
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		1e-04
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		1e-04
1luf_A	343	Crystal Structure Of The Musk Tyrosine Kinase: Insi		1e-04
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		1e-04
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		1e-04
1fvr_A	327	Tie2 Kinase Domain Length = 327		1e-04
2oo8_X	317	Synthesis, Structural Analysis, And Sar Studies Of		1e-04
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		1e-04
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		1e-04
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		1e-04
3gi3_A	360	Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana		1e-04
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		2e-04
2dyl_A	318	Crystal Structure Of Human Mitogen-Activated Protei		2e-04
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		2e-04
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		2e-04
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		2e-04
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		2e-04
4gt4_A	308	Structure Of Unliganded, Inactive Ror2 Kinase Domai		2e-04
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		2e-04
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		2e-04
1r0p_A	312	Crystal Structure Of The Tyrosine Kinase Domain Of		2e-04
3pp0_A	338	Crystal Structure Of The Kinase Domain Of Human Her		2e-04
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		2e-04
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		2e-04
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		2e-04
3cth_A	314	Crystal Structure Of The Tyrosine Kinase Domain Of		2e-04
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		2e-04
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		2e-04
3a4p_A	319	Human C-Met Kinase Domain Complexed With 6-Benzylox		2e-04
3zzw_A	289	Crystal Structure Of The Kinase Domain Of Ror2 Leng		2e-04
3a7f_A	303	Human Mst3 Kinase Length = 303		2e-04
3gop_A	361	Crystal Structure Of The Egf Receptor Juxtamembrane		2e-04
3dkc_A	317	Sgx Clone 5698a65kfg1h1 Length = 317		2e-04
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		2e-04
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		2e-04
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		2e-04
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		2e-04
2itn_A	327	Crystal Structure Of Egfr Kinase Domain G719s Mutat		2e-04
3qti_A	314	C-Met Kinase In Complex With Nvp-Bvu972 Length = 31		2e-04
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		2e-04
2pl0_A	289	Lck Bound To Imatinib Length = 289		2e-04
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		2e-04
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		2e-04
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		2e-04
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		2e-04
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		2e-04
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		2e-04
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		2e-04
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		2e-04
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		2e-04
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		2e-04
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		2e-04
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		2e-04
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		2e-04
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		2e-04
3uiu_A	306	Crystal Structure Of Apo-Pkr Kinase Domain Length =		2e-04
4i20_A	329	Crystal Structure Of Monomeric (v948r) Primary Onco		2e-04
3c1x_A	373	Crystal Structure Of The Tyrosine Kinase Domain Of		2e-04
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		2e-04
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		2e-04
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		2e-04
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		2e-04
2eb2_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (G7		2e-04
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		2e-04
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		2e-04
2itt_A	327	Crystal Structure Of Egfr Kinase Domain L858r Mutat		2e-04
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		3e-04
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		3e-04
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		3e-04
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		3e-04
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		3e-04
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		3e-04
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		3e-04
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		3e-04
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		3e-04
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		3e-04
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		3e-04
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		3e-04
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		3e-04
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		3e-04
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		3e-04
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		3e-04
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		3e-04
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		3e-04
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		3e-04
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		3e-04
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		3e-04
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		3e-04
4i1z_A	329	Crystal Structure Of The Monomeric (v948r) Form Of		3e-04
3w2o_A	331	Egfr Kinase Domain T790m/l858r Mutant With Tak-285		3e-04
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		3e-04
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		3e-04
2eb3_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (L8		3e-04
3o8p_A	360	Conformational Plasticity Of P38 Map Kinase Dfg Mot		3e-04
3ug1_A	334	Crystal Structure Of The Mutated Egfr Kinase Domain		3e-04
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		3e-04
2qlu_A	314	Crystal Structure Of Activin Receptor Type Ii Kinas		3e-04
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		3e-04
1py5_A	326	Crystal Structure Of Tgf-Beta Receptor I Kinase Wit		3e-04
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		3e-04
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		3e-04
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		3e-04
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		3e-04
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		3e-04
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		3e-04
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		3e-04
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		3e-04
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		3e-04
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		3e-04
1zxe_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		3e-04
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		3e-04
4i21_A	329	Crystal Structure Of L858r + T790m Egfr Kinase Doma		3e-04
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		3e-04
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		3e-04
3zuv_A	364	Crystal Structure Of A Designed Selected Ankyrin Re		3e-04
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		3e-04
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		3e-04
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		3e-04
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		3e-04
2erk_A	365	Phosphorylated Map Kinase Erk2 Length = 365		3e-04
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		3e-04
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		3e-04
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		3e-04
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		3e-04
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		3e-04
2pml_X	348	Crystal Structure Of Pfpk7 In Complex With An Atp A		4e-04
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		4e-04
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		4e-04
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		4e-04
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		4e-04
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		5e-04
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		5e-04
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		5e-04
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		5e-04
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		5e-04
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		5e-04
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		5e-04
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		5e-04
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		5e-04
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		5e-04
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		5e-04
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		5e-04
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		5e-04
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		5e-04
2wqb_A	324	Structure Of The Tie2 Kinase Domain In Complex With		5e-04
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		5e-04
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		5e-04
2zv2_A	298	Crystal Structure Of Human CalciumCALMODULIN-Depend		5e-04
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		5e-04
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		5e-04
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		5e-04
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		5e-04
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		5e-04
3rp9_A	458	Crystal Structure Of The Apo Mapk From Toxoplasma G		5e-04
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		5e-04
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		5e-04
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		5e-04
3mh1_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		5e-04
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		6e-04
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		6e-04
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		6e-04
2y4i_C	395	Ksr2-Mek1 Heterodimer Length = 395		6e-04
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		6e-04
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		6e-04
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		7e-04
3eqc_A	360	X-Ray Structure Of The Human Mitogen-Activated Prot		7e-04
2p55_A	333	X-Ray Structure Of The Human Mitogen-Activated Prot		7e-04
4e4l_A	302	Jak1 Kinase (Jh1 Domain) In Complex With Compound 3		7e-04
3eyg_A	290	Crystal Structures Of Jak1 And Jak2 Inhibitor Compl		7e-04
1s9j_A	341	X-Ray Structure Of The Human Mitogen-Activated Prot		7e-04
3tzm_A	309	Tgf-Beta Receptor Type 1 In Complex With Sb431542 L		7e-04
3mbl_A	328	Crystal Structure Of The Human Mitogen-Activated Pr		7e-04
3dv3_A	322	Mek1 With Pf-04622664 Bound Length = 322		7e-04
1rw8_A	301	Crystal Structure Of Tgf-Beta Receptor I Kinase Wit		7e-04
3qup_A	323	Inhibitor Bound Structure Of The Kinase Domain Of T		8e-04
1vjy_A	303	Crystal Structure Of A Naphthyridine Inhibitor Of H		8e-04
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		8e-04
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		8e-04
3mtl_A	324	Crystal Structure Of The Pctaire1 Kinase In Complex		8e-04

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 96.3 bits (238), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 63/167 (37%), Positives = 81/167 (48%), Gaps = 30/167 (17%)
Query: 402 AATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLE-EFKNEIETSNSNA- 459
            A+DNFS  N LG+GGFG VYK +   G  +AVKRL     QG E +F+ E+E  +    
Sbjct: 35  VASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVEMISMAVH 94
Query: 460 ----------------------TIGANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIA 497
                                     +V + +RE      P     L W  R  I +G A
Sbjct: 95  RNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPP-----LDWPKRQRIALGSA 149
Query: 498 RGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQK 544
           RGL YLH     +IIHRD+K +NILLD+E    + DFGLA  +MD K
Sbjct: 150 RGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA-KLMDYK 195

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score = 94.4 bits (233), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/167 (37%), Positives = 80/167 (47%), Gaps = 30/167 (17%)
Query: 402 AATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLE-EFKNEIETSNSNA- 459
            A+DNF   N LG+GGFG VYK +   G  +AVKRL     QG E +F+ E+E  +    
Sbjct: 27  VASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVH 86
Query: 460 ----------------------TIGANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIA 497
                                     +V + +RE      P     L W  R  I +G A
Sbjct: 87  RNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPP-----LDWPKRQRIALGSA 141
Query: 498 RGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQK 544
           RGL YLH     +IIHRD+K +NILLD+E    + DFGLA  +MD K
Sbjct: 142 RGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA-KLMDYK 187

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 83.6 bits (205), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/169 (35%), Positives = 80/169 (47%), Gaps = 34/169 (20%)
Query: 392 LPFIDFESILAATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQG------- 444
           +P +D E    AT+NF     +G G FG VYK     G ++A+KR +  S QG       
Sbjct: 29  VPLVDLEE---ATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETE 85
Query: 445 -----------LEEFKNEIETSNSNATI-----GANVKAFVREMKTFSDPTLSALLHWEM 488
                      L       +  N    I       N+K   R +     PT+S  + WE 
Sbjct: 86  IETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLK---RHLYGSDLPTMS--MSWEQ 140
Query: 489 RFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           R  I IG ARGL YLH  +   IIHRD+K+ NILLD+   PKI+DFG++
Sbjct: 141 RLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGIS 186

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 83.6 bits (205), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/169 (35%), Positives = 80/169 (47%), Gaps = 34/169 (20%)
Query: 392 LPFIDFESILAATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQG------- 444
           +P +D E    AT+NF     +G G FG VYK     G ++A+KR +  S QG       
Sbjct: 29  VPLVDLEE---ATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETE 85
Query: 445 -----------LEEFKNEIETSNSNATI-----GANVKAFVREMKTFSDPTLSALLHWEM 488
                      L       +  N    I       N+K   R +     PT+S  + WE 
Sbjct: 86  IETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLK---RHLYGSDLPTMS--MSWEQ 140
Query: 489 RFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           R  I IG ARGL YLH  +   IIHRD+K+ NILLD+   PKI+DFG++
Sbjct: 141 RLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGIS 186

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/147 (34%), Positives = 74/147 (50%), Gaps = 27/147 (18%)
Query: 410 ANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVKAFV 469
             ++G G FG VYK K+ G   + +  +++ + Q L+ FKNE+        +  N+  F 
Sbjct: 33  GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV--NILLF- 89
Query: 470 REMKTFSDPTLSALLHW-------------EMRFNII--IGIAR----GLLYLHQDSRLR 510
             M   + P L+ +  W             E +F +I  I IAR    G+ YLH  S   
Sbjct: 90  --MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS--- 144
Query: 511 IIHRDLKTSNILLDQEMNPKISDFGLA 537
           IIHRDLK++NI L +++  KI DFGLA
Sbjct: 145 IIHRDLKSNNIFLHEDLTVKIGDFGLA 171

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 78/170 (45%), Gaps = 35/170 (20%)
Query: 397 FESILAATDNFSE------ANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKN 450
           F  +   T+NF E       NK+G+GGFG VYK  +     +AVK+L++      EE K 
Sbjct: 17  FYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEELKQ 75
Query: 451 EIETSNSNATIGANVKAFVREMKTFSD------------PTLSAL-----------LHWE 487
           + +       +       + E+  FS             P  S L           L W 
Sbjct: 76  QFD--QEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 488 MRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           MR  I  G A G+ +LH++     IHRD+K++NILLD+    KISDFGLA
Sbjct: 134 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLA 180

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/147 (34%), Positives = 74/147 (50%), Gaps = 27/147 (18%)
Query: 410 ANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVKAFV 469
             ++G G FG VYK K+ G   + +  +++ + Q L+ FKNE+        +  N+  F 
Sbjct: 40  GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV--NILLF- 96
Query: 470 REMKTFSDPTLSALLHW-------------EMRFNII--IGIAR----GLLYLHQDSRLR 510
             M   + P L+ +  W             E +F +I  I IAR    G+ YLH  S   
Sbjct: 97  --MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS--- 151
Query: 511 IIHRDLKTSNILLDQEMNPKISDFGLA 537
           IIHRDLK++NI L +++  KI DFGLA
Sbjct: 152 IIHRDLKSNNIFLHEDLTVKIGDFGLA 178

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 78/170 (45%), Gaps = 35/170 (20%)
Query: 397 FESILAATDNFSE------ANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKN 450
           F  +   T+NF E       NK+G+GGFG VYK  +     +AVK+L++      EE K 
Sbjct: 17  FYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEELKQ 75
Query: 451 EIETSNSNATIGANVKAFVREMKTFSD------------PTLSAL-----------LHWE 487
           + +       +       + E+  FS             P  S L           L W 
Sbjct: 76  QFD--QEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 488 MRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           MR  I  G A G+ +LH++     IHRD+K++NILLD+    KISDFGLA
Sbjct: 134 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLA 180

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/147 (34%), Positives = 74/147 (50%), Gaps = 27/147 (18%)
Query: 410 ANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVKAFV 469
             ++G G FG VYK K+ G   + +  +++ + Q L+ FKNE+        +  N+  F 
Sbjct: 41  GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV--NILLF- 97
Query: 470 REMKTFSDPTLSALLHW-------------EMRFNII--IGIAR----GLLYLHQDSRLR 510
             M   + P L+ +  W             E +F +I  I IAR    G+ YLH  S   
Sbjct: 98  --MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS--- 152
Query: 511 IIHRDLKTSNILLDQEMNPKISDFGLA 537
           IIHRDLK++NI L +++  KI DFGLA
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGLA 179

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/147 (34%), Positives = 74/147 (50%), Gaps = 27/147 (18%)
Query: 410 ANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVKAFV 469
             ++G G FG VYK K+ G   + +  +++ + Q L+ FKNE+        +  N+  F 
Sbjct: 41  GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV--NILLF- 97
Query: 470 REMKTFSDPTLSALLHW-------------EMRFNII--IGIAR----GLLYLHQDSRLR 510
             M   + P L+ +  W             E +F +I  I IAR    G+ YLH  S   
Sbjct: 98  --MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS--- 152
Query: 511 IIHRDLKTSNILLDQEMNPKISDFGLA 537
           IIHRDLK++NI L +++  KI DFGLA
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGLA 179

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/147 (34%), Positives = 74/147 (50%), Gaps = 27/147 (18%)
Query: 410 ANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVKAFV 469
             ++G G FG VYK K+ G   + +  +++ + Q L+ FKNE+        +  N+  F 
Sbjct: 18  GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV--NILLF- 74
Query: 470 REMKTFSDPTLSALLHW-------------EMRFNII--IGIAR----GLLYLHQDSRLR 510
             M   + P L+ +  W             E +F +I  I IAR    G+ YLH  S   
Sbjct: 75  --MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS--- 129
Query: 511 IIHRDLKTSNILLDQEMNPKISDFGLA 537
           IIHRDLK++NI L +++  KI DFGLA
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGLA 156

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/147 (34%), Positives = 74/147 (50%), Gaps = 27/147 (18%)
Query: 410 ANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVKAFV 469
             ++G G FG VYK K+ G   + +  +++ + Q L+ FKNE+        +  N+  F 
Sbjct: 18  GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV--NILLF- 74
Query: 470 REMKTFSDPTLSALLHW-------------EMRFNII--IGIAR----GLLYLHQDSRLR 510
             M   + P L+ +  W             E +F +I  I IAR    G+ YLH  S   
Sbjct: 75  --MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS--- 129
Query: 511 IIHRDLKTSNILLDQEMNPKISDFGLA 537
           IIHRDLK++NI L +++  KI DFGLA
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGLA 156

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 78/170 (45%), Gaps = 35/170 (20%)
Query: 397 FESILAATDNFSE------ANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKN 450
           F  +   T+NF E       NK+G+GGFG VYK  +     +AVK+L++      EE K 
Sbjct: 11  FYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEELKQ 69
Query: 451 EIETSNSNATIGANVKAFVREMKTFSD------------PTLSAL-----------LHWE 487
           + +       +       + E+  FS             P  S L           L W 
Sbjct: 70  QFD--QEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 127
Query: 488 MRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           MR  I  G A G+ +LH++     IHRD+K++NILLD+    KISDFGLA
Sbjct: 128 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLA 174

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/147 (34%), Positives = 74/147 (50%), Gaps = 27/147 (18%)
Query: 410 ANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVKAFV 469
             ++G G FG VYK K+ G   + +  +++ + Q L+ FKNE+        +  N+  F 
Sbjct: 13  GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV--NILLF- 69
Query: 470 REMKTFSDPTLSALLHW-------------EMRFNII--IGIAR----GLLYLHQDSRLR 510
             M   + P L+ +  W             E +F +I  I IAR    G+ YLH  S   
Sbjct: 70  --MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS--- 124
Query: 511 IIHRDLKTSNILLDQEMNPKISDFGLA 537
           IIHRDLK++NI L +++  KI DFGLA
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLA 151

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/147 (34%), Positives = 74/147 (50%), Gaps = 27/147 (18%)
Query: 410 ANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVKAFV 469
             ++G G FG VYK K+ G   + +  +++ + Q L+ FKNE+        +  N+  F 
Sbjct: 15  GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV--NILLF- 71
Query: 470 REMKTFSDPTLSALLHW-------------EMRFNII--IGIAR----GLLYLHQDSRLR 510
             M   + P L+ +  W             E +F +I  I IAR    G+ YLH  S   
Sbjct: 72  --MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS--- 126
Query: 511 IIHRDLKTSNILLDQEMNPKISDFGLA 537
           IIHRDLK++NI L +++  KI DFGLA
Sbjct: 127 IIHRDLKSNNIFLHEDLTVKIGDFGLA 153

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 75/151 (49%), Gaps = 27/151 (17%)
Query: 406 NFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANV 465
             +   ++G G FG VYK K+ G   + +  +++ + Q L+ FKNE+        +  N+
Sbjct: 9   QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV--NI 66
Query: 466 KAFVREMKTFSDPTLSALLHW-------------EMRFNII--IGIAR----GLLYLHQD 506
             F   M   + P L+ +  W             E +F +I  I IAR    G+ YLH  
Sbjct: 67  LLF---MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 123
Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           S   IIHRDLK++NI L +++  KI DFGLA
Sbjct: 124 S---IIHRDLKSNNIFLHEDLTVKIGDFGLA 151

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 75/151 (49%), Gaps = 27/151 (17%)
Query: 406 NFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANV 465
             +   ++G G FG VYK K+ G   + +  +++ + Q L+ FKNE+        +  N+
Sbjct: 9   QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV--NI 66
Query: 466 KAFVREMKTFSDPTLSALLHW-------------EMRFNII--IGIAR----GLLYLHQD 506
             F   M   + P L+ +  W             E +F +I  I IAR    G+ YLH  
Sbjct: 67  LLF---MGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 123
Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           S   IIHRDLK++NI L +++  KI DFGLA
Sbjct: 124 S---IIHRDLKSNNIFLHEDLTVKIGDFGLA 151

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 68.9 bits (167), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 73/147 (49%), Gaps = 27/147 (18%)
Query: 410 ANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVKAFV 469
             ++G G FG VYK K+ G   + +  +++ + Q L+ FKNE+        +  N+  F 
Sbjct: 17  GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV--NILLF- 73
Query: 470 REMKTFSDPTLSALLHW-------------EMRFNI--IIGIAR----GLLYLHQDSRLR 510
             M   + P L+ +  W             E +F +  +I IAR    G+ YLH  S   
Sbjct: 74  --MGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS--- 128
Query: 511 IIHRDLKTSNILLDQEMNPKISDFGLA 537
           IIHRDLK++NI L ++   KI DFGLA
Sbjct: 129 IIHRDLKSNNIFLHEDNTVKIGDFGLA 155

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 68.9 bits (167), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 74/149 (49%), Gaps = 27/149 (18%)
Query: 410 ANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVKAFV 469
             ++G G FG VYK K+ G   + +  +++ + Q L+ FKNE+        +  N+  F 
Sbjct: 29  GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV--NILLF- 85
Query: 470 REMKTFSDPTLSALLHW-------------EMRFNI--IIGIAR----GLLYLHQDSRLR 510
             M   + P L+ +  W             E +F +  +I IAR    G+ YLH  S   
Sbjct: 86  --MGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS--- 140
Query: 511 IIHRDLKTSNILLDQEMNPKISDFGLALD 539
           IIHRDLK++NI L ++   KI DFGLA +
Sbjct: 141 IIHRDLKSNNIFLHEDNTVKIGDFGLATE 169

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 68.9 bits (167), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 74/149 (49%), Gaps = 27/149 (18%)
Query: 410 ANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVKAFV 469
             ++G G FG VYK K+ G   + +  +++ + Q L+ FKNE+        +  N+  F 
Sbjct: 29  GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV--NILLF- 85
Query: 470 REMKTFSDPTLSALLHW-------------EMRFNI--IIGIAR----GLLYLHQDSRLR 510
             M   + P L+ +  W             E +F +  +I IAR    G+ YLH  S   
Sbjct: 86  --MGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS--- 140
Query: 511 IIHRDLKTSNILLDQEMNPKISDFGLALD 539
           IIHRDLK++NI L ++   KI DFGLA +
Sbjct: 141 IIHRDLKSNNIFLHEDNTVKIGDFGLATE 169

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 75/168 (44%), Gaps = 31/168 (18%)
Query: 397 FESILAATDNFSE------ANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKN 450
           F  +   T+NF E       NK G+GGFG VYK  +     +AVK+L++      EE K 
Sbjct: 8   FYELKNVTNNFDERPISVGGNKXGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEELKQ 66
Query: 451 EIETS----------NSNATIGANVKAFVREMKTFSDPTLSAL-----------LHWEMR 489
           + +            N    +G +       +     P  S L           L W  R
Sbjct: 67  QFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXR 126
Query: 490 FNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
             I  G A G+ +LH++     IHRD+K++NILLD+    KISDFGLA
Sbjct: 127 CKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLA 171

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 71/147 (48%), Gaps = 27/147 (18%)
Query: 410 ANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVKAFV 469
           + ++G G FG VYK K+ G   + + ++   + +  + F+NE+       T   N+  F 
Sbjct: 41  STRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRK--TRHVNILLF- 97
Query: 470 REMKTFSDPTLSALLHW-------------EMRFNI--IIGIAR----GLLYLHQDSRLR 510
             M   +   L+ +  W             E +F +  +I IAR    G+ YLH  +   
Sbjct: 98  --MGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKN--- 152
Query: 511 IIHRDLKTSNILLDQEMNPKISDFGLA 537
           IIHRD+K++NI L + +  KI DFGLA
Sbjct: 153 IIHRDMKSNNIFLHEGLTVKIGDFGLA 179

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 73/153 (47%), Gaps = 32/153 (20%)
Query: 413 LGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVK---AFV 469
           +G GGFG VY+A F  G ++AVK   +A     E+    IE     A + A +K      
Sbjct: 15  IGIGGFGKVYRA-FWIGDEVAVK---AARHDPDEDISQTIENVRQEAKLFAMLKHPNIIA 70
Query: 470 REMKTFSDPTLSALLHW-----------------EMRFNIIIGIARGLLYLHQDSRLRII 512
                  +P L  ++ +                 ++  N  + IARG+ YLH ++ + II
Sbjct: 71  LRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPII 130
Query: 513 HRDLKTSNILLDQEMN--------PKISDFGLA 537
           HRDLK+SNIL+ Q++          KI+DFGLA
Sbjct: 131 HRDLKSSNILILQKVENGDLSNKILKITDFGLA 163

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 71/164 (43%), Gaps = 40/164 (24%)
Query: 405 DNFSEANKLGKGGFGPVYKAK-FPGGQQIAVKRLSSAS---GQGLEEFKNEIETSNS--- 457
           ++F   N LGKG F  VY+A+    G ++A+K +   +      ++  +NE++       
Sbjct: 11  EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70
Query: 458 -------NATIGANVKAFVREM--------------KTFSDPTLSALLHWEMRFNIIIGI 496
                  N    +N    V EM              K FS+      +H          I
Sbjct: 71  PSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQ---------I 121
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM 540
             G+LYLH      I+HRDL  SN+LL + MN KI+DFGLA  +
Sbjct: 122 ITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQL 162

>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331

Iteration: 1
 Score = 55.5 bits (132), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 92/188 (48%), Gaps = 37/188 (19%)
Query: 390 IDLPFIDFESILAATDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQ----- 443
           ++ PF D          + +  K+G+G FG V+KA+    GQ++A+K++   + +     
Sbjct: 9   VECPFCD------EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPI 62
Query: 444 -GLEEFK-----------NEIETSNSNATIGANVKAFVREMKTFSDPTLSALL-HWEMRF 490
             L E K           N IE   + A+     KA +  +  F +  L+ LL +  ++F
Sbjct: 63  TALREIKILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKF 122
Query: 491 N------IIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQK 544
                  ++  +  GL Y+H++   +I+HRD+K +N+L+ ++   K++DFGLA       
Sbjct: 123 TLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAF---S 176
Query: 545 LHASSKPN 552
           L  +S+PN
Sbjct: 177 LAKNSQPN 184

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 27/154 (17%)
Query: 405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKR--------------------LSSASGQ 443
           +NF +  K+G+G +G VYKA+    G+ +A+K+                    L   +  
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 444 GLEEFKNEIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYL 503
            + +  + I T N    +  +V    +++KTF D +    +   +  + +  + +GL + 
Sbjct: 62  NIVKLLDVIHTENKLYLVFEHVH---QDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 504 HQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           H     R++HRDLK  N+L++ E   K++DFGLA
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 149

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 76/150 (50%), Gaps = 21/150 (14%)
Query: 405 DNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLS-SASGQG-----------LEEFKNE- 451
           + + +  K+G+G +G VYKAK   G+ +A+KR+   A  +G           L+E  +  
Sbjct: 21  EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 452 ----IETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDS 507
               I+  +S   +    +   +++K   D   + L   +++   +  + RG+ + HQ  
Sbjct: 81  IVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKI-YLYQLLRGVAHCHQH- 138
Query: 508 RLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
             RI+HRDLK  N+L++ +   K++DFGLA
Sbjct: 139 --RILHRDLKPQNLLINSDGALKLADFGLA 166

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 71/169 (42%), Gaps = 26/169 (15%)
Query: 395 IDFESILAATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEI-- 452
           ID  ++      F     +G G +G VYK +     Q+A  ++   +G   EE K EI  
Sbjct: 14  IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINM 73
Query: 453 -ETSNSNATIGANVKAFVREMKTFSDPTLSALLHW--------------------EMRFN 491
            +  + +  I     AF+++     D  L  ++ +                    E    
Sbjct: 74  LKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAY 133
Query: 492 IIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM 540
           I   I RGL +LHQ    ++IHRD+K  N+LL +    K+ DFG++  +
Sbjct: 134 ICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 179

>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 91/188 (48%), Gaps = 37/188 (19%)
Query: 390 IDLPFIDFESILAATDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQ----- 443
           ++ PF D          + +  K+G+G FG V+KA+    GQ++A+K++   + +     
Sbjct: 9   VECPFCD------EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPI 62
Query: 444 -GLEEFK-----------NEIETSNSNATIGANVKAFVREMKTFSDPTLSALL-HWEMRF 490
             L E K           N IE   + A+     K  +  +  F +  L+ LL +  ++F
Sbjct: 63  TALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKF 122
Query: 491 N------IIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQK 544
                  ++  +  GL Y+H++   +I+HRD+K +N+L+ ++   K++DFGLA       
Sbjct: 123 TLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAF---S 176
Query: 545 LHASSKPN 552
           L  +S+PN
Sbjct: 177 LAKNSQPN 184

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 76/150 (50%), Gaps = 21/150 (14%)
Query: 405 DNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLS-SASGQG-----------LEEFKNE- 451
           + + +  K+G+G +G VYKAK   G+ +A+KR+   A  +G           L+E  +  
Sbjct: 21  EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 452 ----IETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDS 507
               I+  +S   +    +   +++K   D   + L   +++   +  + RG+ + HQ  
Sbjct: 81  IVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKI-YLYQLLRGVAHCHQH- 138
Query: 508 RLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
             RI+HRDLK  N+L++ +   K++DFGLA
Sbjct: 139 --RILHRDLKPQNLLINSDGALKLADFGLA 166

>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 91/188 (48%), Gaps = 37/188 (19%)
Query: 390 IDLPFIDFESILAATDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQ----- 443
           ++ PF D          + +  K+G+G FG V+KA+    GQ++A+K++   + +     
Sbjct: 8   VECPFCD------EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPI 61
Query: 444 -GLEEFK-----------NEIETSNSNATIGANVKAFVREMKTFSDPTLSALL-HWEMRF 490
             L E K           N IE   + A+     K  +  +  F +  L+ LL +  ++F
Sbjct: 62  TALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKF 121
Query: 491 N------IIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQK 544
                  ++  +  GL Y+H++   +I+HRD+K +N+L+ ++   K++DFGLA       
Sbjct: 122 TLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAF---S 175
Query: 545 LHASSKPN 552
           L  +S+PN
Sbjct: 176 LAKNSQPN 183

>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 91/188 (48%), Gaps = 37/188 (19%)
Query: 390 IDLPFIDFESILAATDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQ----- 443
           ++ PF D          + +  K+G+G FG V+KA+    GQ++A+K++   + +     
Sbjct: 9   VECPFCD------EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPI 62
Query: 444 -GLEEFK-----------NEIETSNSNATIGANVKAFVREMKTFSDPTLSALL-HWEMRF 490
             L E K           N IE   + A+     K  +  +  F +  L+ LL +  ++F
Sbjct: 63  TALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKF 122
Query: 491 N------IIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQK 544
                  ++  +  GL Y+H++   +I+HRD+K +N+L+ ++   K++DFGLA       
Sbjct: 123 TLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAF---S 176
Query: 545 LHASSKPN 552
           L  +S+PN
Sbjct: 177 LAKNSQPN 184

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 75/154 (48%), Gaps = 21/154 (13%)
Query: 402 AATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRL------SSASGQGLEEFKNEIET 454
            + +NF +  K+G+G +G VYKA+    G+ +A+K++             + E     E 
Sbjct: 3   GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 455 SNSNAT-----IGANVKAFV------REMKTFSDPTLSALLHWEMRFNIIIGIARGLLYL 503
           ++ N       I    K ++      +++KTF D +    +   +  + +  + +GL + 
Sbjct: 63  NHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 504 HQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           H     R++HRDLK  N+L++ E   K++DFGLA
Sbjct: 123 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 153

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 74/161 (45%), Gaps = 39/161 (24%)
Query: 407 FSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQGLEEFKNEIET----------- 454
           F    KLG+G +G VYKA     GQ +A+K++   S   L+E   EI             
Sbjct: 31  FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD--LQEIIKEISIMQQCDSPHVVK 88
Query: 455 ------SNSNATI------GANVKAFVR-EMKTFSDPTLSALLHWEMRFNIIIGIARGLL 501
                  N++  I        +V   +R   KT ++  ++ +L   ++         GL 
Sbjct: 89  YYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLK---------GLE 139
Query: 502 YLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD 542
           YLH    +R IHRD+K  NILL+ E + K++DFG+A  + D
Sbjct: 140 YLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTD 177

>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 25/162 (15%)
Query: 403 ATDNFSEANKLGKGGFGPVYK-AKFPGGQQIAVKRLSSA-----SGQGLEEFKNEIETSN 456
             ++  +  ++G+G +G V K    P GQ +AVKR+ S        Q L +    + +S+
Sbjct: 20  TAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSD 79
Query: 457 SNATIGANVKAFVRE---------MKTFSD-------PTLSALLHWEMRFNIIIGIARGL 500
               I     A  RE         M T  D         L  ++  E+   I +   + L
Sbjct: 80  C-PYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKAL 138
Query: 501 LYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD 542
            +L ++  L+IIHRD+K SNILLD+  N K+ DFG++  ++D
Sbjct: 139 NHLKEN--LKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVD 178

>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/186 (25%), Positives = 84/186 (45%), Gaps = 45/186 (24%)
Query: 394 FIDFESILAATDNFSEANKLGKGGFGPVYKAKFPGGQQ----IAVKRLSSASG-QGLEEF 448
            I  E ++  +D       +GKG FG VY  ++    Q     A+K LS  +  Q +E F
Sbjct: 15  LIPHERVVTHSDRV-----IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAF 69
Query: 449 KNE------IETSNSNATIG------------------ANVKAFVREMKTFSDPTLSALL 484
             E      +   N  A IG                   ++  F+R  +   +PT+  L+
Sbjct: 70  LREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQ--RNPTVKDLI 127
Query: 485 HWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQK 544
            + ++      +ARG+ YL +    + +HRDL   N +LD+    K++DFGLA D++D++
Sbjct: 128 SFGLQ------VARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDRE 178
Query: 545 LHASSK 550
            ++  +
Sbjct: 179 YYSVQQ 184

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 75/155 (48%), Gaps = 21/155 (13%)
Query: 401 LAATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRL------SSASGQGLEEFKNEIE 453
           L + +NF +  K+G+G +G VYKA+    G+ +A+K++             + E     E
Sbjct: 2   LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 454 TSNSNAT-----IGANVKAFV------REMKTFSDPTLSALLHWEMRFNIIIGIARGLLY 502
            ++ N       I    K ++      +++K F D +    +   +  + +  + +GL +
Sbjct: 62  LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 503 LHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            H     R++HRDLK  N+L++ E   K++DFGLA
Sbjct: 122 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 153

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 75/155 (48%), Gaps = 21/155 (13%)
Query: 401 LAATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRL------SSASGQGLEEFKNEIE 453
           L + +NF +  K+G+G +G VYKA+    G+ +A+K++             + E     E
Sbjct: 3   LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 62
Query: 454 TSNSNAT-----IGANVKAFV------REMKTFSDPTLSALLHWEMRFNIIIGIARGLLY 502
            ++ N       I    K ++      +++K F D +    +   +  + +  + +GL +
Sbjct: 63  LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 122
Query: 503 LHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            H     R++HRDLK  N+L++ E   K++DFGLA
Sbjct: 123 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 154

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 79/167 (47%), Gaps = 31/167 (18%)
Query: 390 IDLPFIDFESILAATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSAS--GQGLEE 447
           +D+P+ D         N  E  K+G G FG V++A++  G  +AVK L       + + E
Sbjct: 32  MDIPWCDL--------NIKE--KIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNE 80
Query: 448 FKNEIET------SNSNATIGANVKAFVREMKT--FSDPTLSALLH---------WEMRF 490
           F  E+         N    +GA  +     + T   S  +L  LLH            R 
Sbjct: 81  FLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRL 140
Query: 491 NIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           ++   +A+G+ YLH +    I+HRDLK+ N+L+D++   K+ DFGL+
Sbjct: 141 SMAYDVAKGMNYLH-NRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLS 186

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 76/163 (46%), Gaps = 28/163 (17%)
Query: 393 PFIDFESILAATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRL------SSASGQGL 445
           P +D E       NF +  K+G+G +G VYKA+    G+ +A+K++             +
Sbjct: 2   PLVDME-------NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI 54
Query: 446 EEFKNEIETSNSNAT-----IGANVKAFV------REMKTFSDPTLSALLHWEMRFNIII 494
            E     E ++ N       I    K ++      +++K F D +    +   +  + + 
Sbjct: 55  REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF 114
Query: 495 GIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            + +GL + H     R++HRDLK  N+L++ E   K++DFGLA
Sbjct: 115 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 154

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 74/155 (47%), Gaps = 21/155 (13%)
Query: 401 LAATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRL------SSASGQGLEEFKNEIE 453
           L + +NF +  K+G+G +G VYKA+    G+ +A+K++             + E     E
Sbjct: 2   LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 454 TSNSNAT-----IGANVKAFV------REMKTFSDPTLSALLHWEMRFNIIIGIARGLLY 502
            ++ N       I    K ++       ++K F D +    +   +  + +  + +GL +
Sbjct: 62  LNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 503 LHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            H     R++HRDLK  N+L++ E   K++DFGLA
Sbjct: 122 CHSH---RVLHRDLKPENLLINTEGAIKLADFGLA 153

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 74/155 (47%), Gaps = 21/155 (13%)
Query: 401 LAATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRL------SSASGQGLEEFKNEIE 453
           L + +NF +  K+G+G +G VYKA+    G+ +A+K++             + E     E
Sbjct: 1   LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 60
Query: 454 TSNSNAT-----IGANVKAFV------REMKTFSDPTLSALLHWEMRFNIIIGIARGLLY 502
            ++ N       I    K ++       ++K F D +    +   +  + +  + +GL +
Sbjct: 61  LNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 503 LHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            H     R++HRDLK  N+L++ E   K++DFGLA
Sbjct: 121 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 152

>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a) Kinase Domain In Complex With Dorsomorphin Length = 322

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 67/151 (44%), Gaps = 30/151 (19%)
Query: 414 GKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVKAFV---- 469
            +G FG V+KA+    + +AVK       Q  + ++NE E  +       N+  F+    
Sbjct: 33  ARGRFGCVWKAQLLN-EYVAVKIFPI---QDKQSWQNEYEVYSLPGMKHENILQFIGAEK 88
Query: 470 ---------------REMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQD-------S 507
                           E  + SD   + ++ W    +I   +ARGL YLH+D        
Sbjct: 89  RGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGH 148
Query: 508 RLRIIHRDLKTSNILLDQEMNPKISDFGLAL 538
           +  I HRD+K+ N+LL   +   I+DFGLAL
Sbjct: 149 KPAISHRDIKSKNVLLKNNLTACIADFGLAL 179

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 74/155 (47%), Gaps = 21/155 (13%)
Query: 401 LAATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRL------SSASGQGLEEFKNEIE 453
           L + +NF +  K+G+G +G VYKA+    G+ +A+K++             + E     E
Sbjct: 2   LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 454 TSNSNAT-----IGANVKAFV------REMKTFSDPTLSALLHWEMRFNIIIGIARGLLY 502
            ++ N       I    K ++       ++K F D +    +   +  + +  + +GL +
Sbjct: 62  LNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 503 LHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            H     R++HRDLK  N+L++ E   K++DFGLA
Sbjct: 122 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 153

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 29/161 (18%)
Query: 403 ATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQG---------------LE 446
           AT  +    ++G G +G VYKA+ P  G  +A+K +   +G+                LE
Sbjct: 2   ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 447 EFKNE--------IETSNSNATIGANV--KAFVREMKTFSDPTLSALLHWEMRFNIIIGI 496
            F++           TS ++  I   +  +   ++++T+ D      L  E   +++   
Sbjct: 62  AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            RGL +LH +    I+HRDLK  NIL+      K++DFGLA
Sbjct: 122 LRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLA 159

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 27/157 (17%)
Query: 402 AATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKR--------------------LSSA 440
            + +NF +  K+G+G +G VYKA+    G+ +A+K+                    L   
Sbjct: 3   GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 441 SGQGLEEFKNEIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGL 500
           +   + +  + I T N    +  +V    +++K F D +    +   +  + +  + +GL
Sbjct: 63  NHPNIVKLLDVIHTENKLYLVFEHVD---QDLKKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 501 LYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            + H     R++HRDLK  N+L++ E   K++DFGLA
Sbjct: 120 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 153

>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 25/171 (14%)
Query: 404 TDNFSEANKLGKGGFGPVYKAK-FPGGQQIAVKRL-SSASGQGLEEFKNEIETSNSNATI 461
            D+     +LG+G +G V K +  P GQ +AVKR+ ++ + Q  +    +++ S      
Sbjct: 50  ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDC 109
Query: 462 GANVK---AFVRE---------MKTFSDPTLSALLH------WEMRFNIIIGIARGLLYL 503
              V    A  RE         M T  D     ++        ++   I + I + L +L
Sbjct: 110 PFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHL 169
Query: 504 HQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA---LDMMDQKLHASSKP 551
           H  S+L +IHRD+K SN+L++     K+ DFG++   +D + + + A  KP
Sbjct: 170 H--SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKP 218

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 29/161 (18%)
Query: 403 ATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQG---------------LE 446
           AT  +    ++G G +G VYKA+ P  G  +A+K +   +G+                LE
Sbjct: 2   ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 447 EFKNE--------IETSNSNATIGANV--KAFVREMKTFSDPTLSALLHWEMRFNIIIGI 496
            F++           TS ++  I   +  +   ++++T+ D      L  E   +++   
Sbjct: 62  AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            RGL +LH +    I+HRDLK  NIL+      K++DFGLA
Sbjct: 122 LRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLA 159

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 29/161 (18%)
Query: 403 ATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQG---------------LE 446
           AT  +    ++G G +G VYKA+ P  G  +A+K +   +G+                LE
Sbjct: 2   ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 447 EFKNE--------IETSNSNATIGANV--KAFVREMKTFSDPTLSALLHWEMRFNIIIGI 496
            F++           TS ++  I   +  +   ++++T+ D      L  E   +++   
Sbjct: 62  AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            RGL +LH +    I+HRDLK  NIL+      K++DFGLA
Sbjct: 122 LRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLA 159

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 74/153 (48%), Gaps = 21/153 (13%)
Query: 403 ATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRL------SSASGQGLEEFKNEIETS 455
           + +NF +  K+G+G +G VYKA+    G+ +A+K++             + E     E +
Sbjct: 1   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 456 NSNAT-----IGANVKAFV------REMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLH 504
           + N       I    K ++      +++K F D +    +   +  + +  + +GL + H
Sbjct: 61  HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 505 QDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
                R++HRDLK  N+L++ E   K++DFGLA
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLA 150

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 74/154 (48%), Gaps = 21/154 (13%)
Query: 402 AATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRL------SSASGQGLEEFKNEIET 454
            + +NF +  K+G+G +G VYKA+    G+ +A+K++             + E     E 
Sbjct: 2   GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 455 SNSNAT-----IGANVKAFV------REMKTFSDPTLSALLHWEMRFNIIIGIARGLLYL 503
           ++ N       I    K ++      +++K F D +    +   +  + +  + +GL + 
Sbjct: 62  NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 504 HQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           H     R++HRDLK  N+L++ E   K++DFGLA
Sbjct: 122 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 152

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 74/153 (48%), Gaps = 21/153 (13%)
Query: 403 ATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRL------SSASGQGLEEFKNEIETS 455
           + +NF +  K+G+G +G VYKA+    G+ +A+K++             + E     E +
Sbjct: 1   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 456 NSNAT-----IGANVKAFV------REMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLH 504
           + N       I    K ++      +++K F D +    +   +  + +  + +GL + H
Sbjct: 61  HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 505 QDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
                R++HRDLK  N+L++ E   K++DFGLA
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLA 150

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 74/154 (48%), Gaps = 21/154 (13%)
Query: 402 AATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRL------SSASGQGLEEFKNEIET 454
            + +NF +  K+G+G +G VYKA+    G+ +A+K++             + E     E 
Sbjct: 1   GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 455 SNSNAT-----IGANVKAFV------REMKTFSDPTLSALLHWEMRFNIIIGIARGLLYL 503
           ++ N       I    K ++      +++K F D +    +   +  + +  + +GL + 
Sbjct: 61  NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 504 HQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           H     R++HRDLK  N+L++ E   K++DFGLA
Sbjct: 121 HSH---RVLHRDLKPENLLINTEGAIKLADFGLA 151

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 74/154 (48%), Gaps = 21/154 (13%)
Query: 402 AATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRL------SSASGQGLEEFKNEIET 454
            + +NF +  K+G+G +G VYKA+    G+ +A+K++             + E     E 
Sbjct: 2   GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 455 SNSNAT-----IGANVKAFV------REMKTFSDPTLSALLHWEMRFNIIIGIARGLLYL 503
           ++ N       I    K ++      +++K F D +    +   +  + +  + +GL + 
Sbjct: 62  NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 504 HQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           H     R++HRDLK  N+L++ E   K++DFGLA
Sbjct: 122 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 152

>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 25/176 (14%)
Query: 399 SILAATDNFSEANKLGKGGFGPVYKAK-FPGGQQIAVKRL-SSASGQGLEEFKNEIETSN 456
           S+    D+     +LG+G +G V K +  P GQ +AVKR+ ++ + Q  +    +++ S 
Sbjct: 1   SMEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISM 60
Query: 457 SNATIGANVK---AFVRE---------MKTFSDPTLSALLH------WEMRFNIIIGIAR 498
                   V    A  RE         M T  D     ++        ++   I + I +
Sbjct: 61  RTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVK 120
Query: 499 GLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA---LDMMDQKLHASSKP 551
            L +LH  S+L +IHRD+K SN+L++     K+ DFG++   +D + + + A  KP
Sbjct: 121 ALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKP 174

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 74/154 (48%), Gaps = 21/154 (13%)
Query: 402 AATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRL------SSASGQGLEEFKNEIET 454
            + +NF +  K+G+G +G VYKA+    G+ +A+K++             + E     E 
Sbjct: 2   GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 455 SNSNAT-----IGANVKAFV------REMKTFSDPTLSALLHWEMRFNIIIGIARGLLYL 503
           ++ N       I    K ++      +++K F D +    +   +  + +  + +GL + 
Sbjct: 62  NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 504 HQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           H     R++HRDLK  N+L++ E   K++DFGLA
Sbjct: 122 HSH---RVLHRDLKPENLLINTEGAIKLADFGLA 152

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 74/154 (48%), Gaps = 21/154 (13%)
Query: 402 AATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRL------SSASGQGLEEFKNEIET 454
            + +NF +  K+G+G +G VYKA+    G+ +A+K++             + E     E 
Sbjct: 1   GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 455 SNSNAT-----IGANVKAFV------REMKTFSDPTLSALLHWEMRFNIIIGIARGLLYL 503
           ++ N       I    K ++      +++K F D +    +   +  + +  + +GL + 
Sbjct: 61  NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 504 HQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           H     R++HRDLK  N+L++ E   K++DFGLA
Sbjct: 121 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 151

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 74/154 (48%), Gaps = 21/154 (13%)
Query: 402 AATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRL------SSASGQGLEEFKNEIET 454
            + +NF +  K+G+G +G VYKA+    G+ +A+K++             + E     E 
Sbjct: 1   GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 455 SNSNAT-----IGANVKAFV------REMKTFSDPTLSALLHWEMRFNIIIGIARGLLYL 503
           ++ N       I    K ++      +++K F D +    +   +  + +  + +GL + 
Sbjct: 61  NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 504 HQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           H     R++HRDLK  N+L++ E   K++DFGLA
Sbjct: 121 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 151

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 74/154 (48%), Gaps = 21/154 (13%)
Query: 402 AATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRL------SSASGQGLEEFKNEIET 454
            + +NF +  K+G+G +G VYKA+    G+ +A+K++             + E     E 
Sbjct: 3   GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 455 SNSNAT-----IGANVKAFV------REMKTFSDPTLSALLHWEMRFNIIIGIARGLLYL 503
           ++ N       I    K ++      +++K F D +    +   +  + +  + +GL + 
Sbjct: 63  NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 504 HQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           H     R++HRDLK  N+L++ E   K++DFGLA
Sbjct: 123 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 153

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 74/153 (48%), Gaps = 21/153 (13%)
Query: 403 ATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRL------SSASGQGLEEFKNEIETS 455
           + +NF +  K+G+G +G VYKA+    G+ +A+K++             + E     E +
Sbjct: 1   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 456 NSNAT-----IGANVKAFV------REMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLH 504
           + N       I    K ++      +++K F D +    +   +  + +  + +GL + H
Sbjct: 61  HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 505 QDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
                R++HRDLK  N+L++ E   K++DFGLA
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLA 150

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 74/153 (48%), Gaps = 21/153 (13%)
Query: 403 ATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRL------SSASGQGLEEFKNEIETS 455
           + +NF +  K+G+G +G VYKA+    G+ +A+K++             + E     E +
Sbjct: 1   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 456 NSNAT-----IGANVKAFV------REMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLH 504
           + N       I    K ++      +++K F D +    +   +  + +  + +GL + H
Sbjct: 61  HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 505 QDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
                R++HRDLK  N+L++ E   K++DFGLA
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLA 150

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 73/151 (48%), Gaps = 21/151 (13%)
Query: 405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRL------SSASGQGLEEFKNEIETSNS 457
           +NF +  K+G+G +G VYKA+    G+ +A+K++             + E     E ++ 
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 458 NAT-----IGANVKAFV------REMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQD 506
           N       I    K ++      +++K F D +    +   +  + +  + +GL + H  
Sbjct: 62  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
              R++HRDLK  N+L++ E   K++DFGLA
Sbjct: 122 ---RVLHRDLKPQNLLINTEGAIKLADFGLA 149

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 73/151 (48%), Gaps = 21/151 (13%)
Query: 405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRL------SSASGQGLEEFKNEIETSNS 457
           +NF +  K+G+G +G VYKA+    G+ +A+K++             + E     E ++ 
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 458 NAT-----IGANVKAFV------REMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQD 506
           N       I    K ++      +++K F D +    +   +  + +  + +GL + H  
Sbjct: 62  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
              R++HRDLK  N+L++ E   K++DFGLA
Sbjct: 122 ---RVLHRDLKPQNLLINTEGAIKLADFGLA 149

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 73/151 (48%), Gaps = 21/151 (13%)
Query: 405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRL------SSASGQGLEEFKNEIETSNS 457
           +NF +  K+G+G +G VYKA+    G+ +A+K++             + E     E ++ 
Sbjct: 4   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 458 NAT-----IGANVKAFV------REMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQD 506
           N       I    K ++      +++K F D +    +   +  + +  + +GL + H  
Sbjct: 64  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
              R++HRDLK  N+L++ E   K++DFGLA
Sbjct: 124 ---RVLHRDLKPQNLLINTEGAIKLADFGLA 151

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 73/151 (48%), Gaps = 21/151 (13%)
Query: 405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRL------SSASGQGLEEFKNEIETSNS 457
           +NF +  K+G+G +G VYKA+    G+ +A+K++             + E     E ++ 
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 458 NAT-----IGANVKAFV------REMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQD 506
           N       I    K ++      +++K F D +    +   +  + +  + +GL + H  
Sbjct: 62  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
              R++HRDLK  N+L++ E   K++DFGLA
Sbjct: 122 ---RVLHRDLKPQNLLINTEGAIKLADFGLA 149

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 73/151 (48%), Gaps = 21/151 (13%)
Query: 405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRL------SSASGQGLEEFKNEIETSNS 457
           +NF +  K+G+G +G VYKA+    G+ +A+K++             + E     E ++ 
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 458 NAT-----IGANVKAFV------REMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQD 506
           N       I    K ++      +++K F D +    +   +  + +  + +GL + H  
Sbjct: 63  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
              R++HRDLK  N+L++ E   K++DFGLA
Sbjct: 123 ---RVLHRDLKPQNLLINTEGAIKLADFGLA 150

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 73/151 (48%), Gaps = 21/151 (13%)
Query: 405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRL------SSASGQGLEEFKNEIETSNS 457
           +NF +  K+G+G +G VYKA+    G+ +A+K++             + E     E ++ 
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 458 NAT-----IGANVKAFV------REMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQD 506
           N       I    K ++      +++K F D +    +   +  + +  + +GL + H  
Sbjct: 62  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
              R++HRDLK  N+L++ E   K++DFGLA
Sbjct: 122 ---RVLHRDLKPQNLLINTEGAIKLADFGLA 149

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 73/151 (48%), Gaps = 21/151 (13%)
Query: 405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRL------SSASGQGLEEFKNEIETSNS 457
           +NF +  K+G+G +G VYKA+    G+ +A+K++             + E     E ++ 
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 458 NAT-----IGANVKAFV------REMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQD 506
           N       I    K ++      +++K F D +    +   +  + +  + +GL + H  
Sbjct: 63  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
              R++HRDLK  N+L++ E   K++DFGLA
Sbjct: 123 ---RVLHRDLKPQNLLINTEGAIKLADFGLA 150

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 74/153 (48%), Gaps = 21/153 (13%)
Query: 403 ATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRL------SSASGQGLEEFKNEIETS 455
           + +NF +  K+G+G +G VYKA+    G+ +A+K++             + E     E +
Sbjct: 1   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 456 NSNAT-----IGANVKAFV------REMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLH 504
           + N       I    K ++      +++K F D +    +   +  + +  + +GL + H
Sbjct: 61  HPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 505 QDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
                R++HRDLK  N+L++ E   K++DFGLA
Sbjct: 121 SH---RVLHRDLKPENLLINTEGAIKLADFGLA 150

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 73/151 (48%), Gaps = 21/151 (13%)
Query: 405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRL------SSASGQGLEEFKNEIETSNS 457
           +NF +  K+G+G +G VYKA+    G+ +A+K++             + E     E ++ 
Sbjct: 10  ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 458 NAT-----IGANVKAFV------REMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQD 506
           N       I    K ++      +++K F D +    +   +  + +  + +GL + H  
Sbjct: 70  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 129
Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
              R++HRDLK  N+L++ E   K++DFGLA
Sbjct: 130 ---RVLHRDLKPQNLLINTEGAIKLADFGLA 157

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 79/167 (47%), Gaps = 31/167 (18%)
Query: 390 IDLPFIDFESILAATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSAS--GQGLEE 447
           +D+P+ D         N  E  K+G G FG V++A++  G  +AVK L       + + E
Sbjct: 32  MDIPWCDL--------NIKE--KIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNE 80
Query: 448 FKNEIET------SNSNATIGANVKAFVREMKT--FSDPTLSALLH---------WEMRF 490
           F  E+         N    +GA  +     + T   S  +L  LLH            R 
Sbjct: 81  FLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRL 140
Query: 491 NIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           ++   +A+G+ YLH +    I+HR+LK+ N+L+D++   K+ DFGL+
Sbjct: 141 SMAYDVAKGMNYLH-NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLS 186

>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory Dimer Length = 316

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 82/185 (44%), Gaps = 25/185 (13%)
Query: 398 ESILAATDNFSEANKLGKGGFGPVYKAK-FPGGQQIAVKRL-SSASGQGLEEFKNEIETS 455
           E+     D+     +LG+G +G V K +  P GQ  AVKR+ ++ + Q  +    +++ S
Sbjct: 27  ENFEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDIS 86
Query: 456 NSNATIGANVK---AFVREMKT-----FSDPTLSAL----------LHWEMRFNIIIGIA 497
                    V    A  RE          D +L             +  ++   I + I 
Sbjct: 87  XRTVDCPFTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIV 146
Query: 498 RGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA---LDMMDQKLHASSKPNEI 554
           + L +LH  S+L +IHRD+K SN+L++     K  DFG++   +D + + + A  KP   
Sbjct: 147 KALEHLH--SKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKPYXA 204
Query: 555 LKCIN 559
            + IN
Sbjct: 205 PERIN 209

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 73/151 (48%), Gaps = 21/151 (13%)
Query: 405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRL------SSASGQGLEEFKNEIETSNS 457
           +NF +  K+G+G +G VYKA+    G+ +A+K++             + E     E ++ 
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 458 NAT-----IGANVKAFV------REMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQD 506
           N       I    K ++      +++K F D +    +   +  + +  + +GL + H  
Sbjct: 63  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
              R++HRDLK  N+L++ E   K++DFGLA
Sbjct: 123 ---RVLHRDLKPQNLLINTEGAIKLADFGLA 150

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 73/151 (48%), Gaps = 21/151 (13%)
Query: 405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRL------SSASGQGLEEFKNEIETSNS 457
           +NF +  K+G+G +G VYKA+    G+ +A+K++             + E     E ++ 
Sbjct: 10  ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 458 NAT-----IGANVKAFV------REMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQD 506
           N       I    K ++      +++K F D +    +   +  + +  + +GL + H  
Sbjct: 70  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 129
Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
              R++HRDLK  N+L++ E   K++DFGLA
Sbjct: 130 ---RVLHRDLKPQNLLINTEGAIKLADFGLA 157

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 73/151 (48%), Gaps = 21/151 (13%)
Query: 405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRL------SSASGQGLEEFKNEIETSNS 457
           +NF +  K+G+G +G VYKA+    G+ +A+K++             + E     E ++ 
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 458 NAT-----IGANVKAFV------REMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQD 506
           N       I    K ++      +++K F D +    +   +  + +  + +GL + H  
Sbjct: 63  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSH 122
Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
              R++HRDLK  N+L++ E   K++DFGLA
Sbjct: 123 ---RVLHRDLKPQNLLINTEGAIKLADFGLA 150

>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 76/165 (46%), Gaps = 38/165 (23%)
Query: 400 ILAATDNFSEANKLGKGGFGPVYKAKF-PGGQQI----AVKRLSSASG-QGLEEFKNEIE 453
           IL  T+       LG G FG VYK  + P G+ +    A+K L+  +G +   EF +E  
Sbjct: 34  ILKETE-LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDE-- 90
Query: 454 TSNSNATIGANV--KAFVREMKTFSDPTLS---------ALLHW----------EMRFNI 492
                A I A++     VR +     PT+           LL +          ++  N 
Sbjct: 91  -----ALIMASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNW 145
Query: 493 IIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            + IA+G++YL +    R++HRDL   N+L+    + KI+DFGLA
Sbjct: 146 CVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLA 187

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 72/172 (41%), Gaps = 28/172 (16%)
Query: 413 LGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQGLEEFKNEI------ETSNSNATIGANV 465
           LGKG FG   K      G+ + +K L     +    F  E+      E  N    IG   
Sbjct: 18  LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 466 KA----FVREMKTFSDPTLSALLH-------WEMRFNIIIGIARGLLYLHQDSRLRIIHR 514
           K     F+ E       TL  ++        W  R +    IA G+ YLH    + IIHR
Sbjct: 78  KDKRLNFITEY--IKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHS---MNIIHR 132
Query: 515 DLKTSNILLDQEMNPKISDFGLALDMMDQK-----LHASSKPNEILKCINVG 561
           DL + N L+ +  N  ++DFGLA  M+D+K     L +  KP+   +   VG
Sbjct: 133 DLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVG 184

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 21/154 (13%)
Query: 402 AATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRL------SSASGQGLEEFKNEIET 454
            + +NF +  K+G+G +G VYKA+    G+ +A+K++             + E     E 
Sbjct: 1   GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 455 SNSNAT-----IGANVKAFV------REMKTFSDPTLSALLHWEMRFNIIIGIARGLLYL 503
           ++ N       I    K ++       ++K F D +    +   +  + +  + +GL + 
Sbjct: 61  NHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 504 HQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           H     R++HRDLK  N+L++ E   K++DFGLA
Sbjct: 121 HSH---RVLHRDLKPENLLINTEGAIKLADFGLA 151

>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 76/165 (46%), Gaps = 38/165 (23%)
Query: 400 ILAATDNFSEANKLGKGGFGPVYKAKF-PGGQQI----AVKRLSSASG-QGLEEFKNEIE 453
           IL  T+       LG G FG VYK  + P G+ +    A+K L+  +G +   EF +E  
Sbjct: 11  ILKETE-LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDE-- 67
Query: 454 TSNSNATIGANV--KAFVREMKTFSDPTLS---------ALLHW----------EMRFNI 492
                A I A++     VR +     PT+           LL +          ++  N 
Sbjct: 68  -----ALIMASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNW 122
Query: 493 IIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            + IA+G++YL +    R++HRDL   N+L+    + KI+DFGLA
Sbjct: 123 CVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLA 164

>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 79/175 (45%), Gaps = 32/175 (18%)
Query: 399 SILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVK-----RLSSASGQGL---EEFK 449
           +I    ++FS    +G+GGFG VY   K   G+  A+K     R+    G+ L   E   
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM 242
Query: 450 NEIETSNSNATIGANVKAFVR--EMKTFSDPTLSALLHW-----------EMRF---NII 493
             + ++     I     AF    ++    D      LH+           +MRF    II
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEII 302
Query: 494 IGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHAS 548
           +G+       H  +R  +++RDLK +NILLD+  + +ISD GLA D   +K HAS
Sbjct: 303 LGLE------HMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS 350

>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 79/175 (45%), Gaps = 32/175 (18%)
Query: 399 SILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVK-----RLSSASGQGL---EEFK 449
           +I    ++FS    +G+GGFG VY   K   G+  A+K     R+    G+ L   E   
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM 242
Query: 450 NEIETSNSNATIGANVKAFVR--EMKTFSDPTLSALLHW-----------EMRF---NII 493
             + ++     I     AF    ++    D      LH+           +MRF    II
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEII 302
Query: 494 IGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHAS 548
           +G+       H  +R  +++RDLK +NILLD+  + +ISD GLA D   +K HAS
Sbjct: 303 LGLE------HMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS 350

>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 79/175 (45%), Gaps = 32/175 (18%)
Query: 399 SILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVK-----RLSSASGQGL---EEFK 449
           +I    ++FS    +G+GGFG VY   K   G+  A+K     R+    G+ L   E   
Sbjct: 182 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM 241
Query: 450 NEIETSNSNATIGANVKAF--VREMKTFSDPTLSALLHW-----------EMRF---NII 493
             + ++     I     AF    ++    D      LH+           +MRF    II
Sbjct: 242 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEII 301
Query: 494 IGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHAS 548
           +G+       H  +R  +++RDLK +NILLD+  + +ISD GLA D   +K HAS
Sbjct: 302 LGLE------HMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS 349

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/162 (24%), Positives = 74/162 (45%), Gaps = 30/162 (18%)
Query: 403 ATDNFSEANKLGKGGFGPVYKAK--FPGGQQIAVKRLSSASGQ---------------GL 445
           A   +    ++G+G +G V+KA+    GG+ +A+KR+   +G+                L
Sbjct: 9   ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 446 EEFKN----------EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNIIIG 495
           E F++           +  ++    +    +   +++ T+ D      +  E   +++  
Sbjct: 69  ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ 128
Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           + RGL +LH     R++HRDLK  NIL+      K++DFGLA
Sbjct: 129 LLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLA 167

>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 79/175 (45%), Gaps = 32/175 (18%)
Query: 399 SILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVK-----RLSSASGQGL---EEFK 449
           +I    ++FS    +G+GGFG VY   K   G+  A+K     R+    G+ L   E   
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM 242
Query: 450 NEIETSNSNATIGANVKAFVR--EMKTFSDPTLSALLHW-----------EMRF---NII 493
             + ++     I     AF    ++    D      LH+           +MRF    II
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEII 302
Query: 494 IGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHAS 548
           +G+       H  +R  +++RDLK +NILLD+  + +ISD GLA D   +K HAS
Sbjct: 303 LGLE------HMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS 350

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/162 (24%), Positives = 74/162 (45%), Gaps = 30/162 (18%)
Query: 403 ATDNFSEANKLGKGGFGPVYKAK--FPGGQQIAVKRLSSASGQ---------------GL 445
           A   +    ++G+G +G V+KA+    GG+ +A+KR+   +G+                L
Sbjct: 9   ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 446 EEFKN----------EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNIIIG 495
           E F++           +  ++    +    +   +++ T+ D      +  E   +++  
Sbjct: 69  ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ 128
Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           + RGL +LH     R++HRDLK  NIL+      K++DFGLA
Sbjct: 129 LLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLA 167

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 66/148 (44%), Gaps = 25/148 (16%)
Query: 412 KLGKGGFGPVYKAKFP-----GGQQIAVKRLSSASGQGLEEFKNEIET------SNSNAT 460
           +LGKG FG V   ++       G+ +AVK+L  ++ + L +F+ EIE        N    
Sbjct: 20  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 461 IGANVKAFVREMKTFSDPTLSALL------HWEMRFNIII-----GIARGLLYLHQDSRL 509
            G    A  R +K   +      L      H E   +I +      I +G+ YL      
Sbjct: 80  KGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGTK--- 136
Query: 510 RIIHRDLKTSNILLDQEMNPKISDFGLA 537
           R IHRDL T NIL++ E   KI DFGL 
Sbjct: 137 RYIHRDLATRNILVENENRVKIGDFGLT 164

>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I Tgf-Beta Receptor In Complex With Fkbp12 Length = 342

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 90/204 (44%), Gaps = 35/204 (17%)
Query: 359 PNMAAPFYESARHVKDMVVDSDQFKEEEKQGIDLPFIDFESILAATDNFSEANKLGKGGF 418
           P++  PF      +KD++ D          G  LP +  +  +A T    E+  +GKG F
Sbjct: 3   PSLDRPFISEGTTLKDLIYDMTT----SGSGSGLPLL-VQRTIARTIVLQES--IGKGRF 55
Query: 419 GPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVKAFV----REMKT 474
           G V++ K+  G+++AVK  SS   +    +  E E   +      N+  F+    ++  T
Sbjct: 56  GEVWRGKWR-GEEVAVKIFSSREERS---WFREAEIYQTVMLRHENILGFIAADNKDNGT 111
Query: 475 FSDPTL-------SALLHWEMRFNIII--------GIARGLLYLHQD-----SRLRIIHR 514
           ++   L        +L  +  R+ + +          A GL +LH +      +  I HR
Sbjct: 112 WTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHR 171
Query: 515 DLKTSNILLDQEMNPKISDFGLAL 538
           DLK+ NIL+ +     I+D GLA+
Sbjct: 172 DLKSKNILVKKNGTCCIADLGLAV 195

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/162 (24%), Positives = 74/162 (45%), Gaps = 30/162 (18%)
Query: 403 ATDNFSEANKLGKGGFGPVYKAK--FPGGQQIAVKRLSSASGQ---------------GL 445
           A   +    ++G+G +G V+KA+    GG+ +A+KR+   +G+                L
Sbjct: 9   ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 446 EEFKN----------EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNIIIG 495
           E F++           +  ++    +    +   +++ T+ D      +  E   +++  
Sbjct: 69  ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ 128
Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           + RGL +LH     R++HRDLK  NIL+      K++DFGLA
Sbjct: 129 LLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLA 167

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 68/148 (45%), Gaps = 25/148 (16%)
Query: 412 KLGKGGFGPVYKAKFP-----GGQQIAVKRLSSASGQGLEEFKNEIET------SNSNAT 460
           +LGKG FG V   ++       G+ +AVK+L  ++ + L +F+ EIE        N    
Sbjct: 20  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 461 IGANVKAFVREMKTFSD----PTLSALL--HWEMRFNIII-----GIARGLLYLHQDSRL 509
            G    A  R +K   +     +L   L  H E   +I +      I +G+ YL      
Sbjct: 80  KGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGTK--- 136
Query: 510 RIIHRDLKTSNILLDQEMNPKISDFGLA 537
           R IHRDL T NIL++ E   KI DFGL 
Sbjct: 137 RYIHRDLATRNILVENENRVKIGDFGLT 164

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 66/148 (44%), Gaps = 25/148 (16%)
Query: 412 KLGKGGFGPVYKAKFP-----GGQQIAVKRLSSASGQGLEEFKNEIET------SNSNAT 460
           +LGKG FG V   ++       G+ +AVK+L  ++ + L +F+ EIE        N    
Sbjct: 16  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 75
Query: 461 IGANVKAFVREMKTFSDPTLSALL------HWEMRFNIII-----GIARGLLYLHQDSRL 509
            G    A  R +K   +      L      H E   +I +      I +G+ YL      
Sbjct: 76  KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK--- 132
Query: 510 RIIHRDLKTSNILLDQEMNPKISDFGLA 537
           R IHRDL T NIL++ E   KI DFGL 
Sbjct: 133 RYIHRDLATRNILVENENRVKIGDFGLT 160

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 73/165 (44%), Gaps = 26/165 (15%)
Query: 412 KLGKGGFGPVYKAKFP-----GGQQIAVKRLSSASGQGLEEFKNEIET------SNSNAT 460
           +LGKG FG V   ++       G+ +AVK+L  ++ + L +F+ EIE        N    
Sbjct: 17  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 461 IGANVKAFVREMKTFSDPTLSALL------HWEMRFNIII-----GIARGLLYLHQDSRL 509
            G    A  R +K   +      L      H E   +I +      I +G+ YL      
Sbjct: 77  KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK--- 133
Query: 510 RIIHRDLKTSNILLDQEMNPKISDFGLALDM-MDQKLHASSKPNE 553
           R IHRDL T NIL++ E   KI DFGL   +  D++     +P E
Sbjct: 134 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGE 178

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 66/148 (44%), Gaps = 25/148 (16%)
Query: 412 KLGKGGFGPVYKAKFP-----GGQQIAVKRLSSASGQGLEEFKNEIET------SNSNAT 460
           +LGKG FG V   ++       G+ +AVK+L  ++ + L +F+ EIE        N    
Sbjct: 15  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 74
Query: 461 IGANVKAFVREMKTFSDPTLSALL------HWEMRFNIII-----GIARGLLYLHQDSRL 509
            G    A  R +K   +      L      H E   +I +      I +G+ YL      
Sbjct: 75  KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTK 131
Query: 510 RIIHRDLKTSNILLDQEMNPKISDFGLA 537
           R IHRDL T NIL++ E   KI DFGL 
Sbjct: 132 RYIHRDLATRNILVENENRVKIGDFGLT 159

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 66/148 (44%), Gaps = 25/148 (16%)
Query: 412 KLGKGGFGPVYKAKFP-----GGQQIAVKRLSSASGQGLEEFKNEIET------SNSNAT 460
           +LGKG FG V   ++       G+ +AVK+L  ++ + L +F+ EIE        N    
Sbjct: 20  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 461 IGANVKAFVREMKTFSDPTLSALL------HWEMRFNIII-----GIARGLLYLHQDSRL 509
            G    A  R +K   +      L      H E   +I +      I +G+ YL      
Sbjct: 80  KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK--- 136
Query: 510 RIIHRDLKTSNILLDQEMNPKISDFGLA 537
           R IHRDL T NIL++ E   KI DFGL 
Sbjct: 137 RYIHRDLATRNILVENENRVKIGDFGLT 164

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 66/148 (44%), Gaps = 25/148 (16%)
Query: 412 KLGKGGFGPVYKAKFP-----GGQQIAVKRLSSASGQGLEEFKNEIET------SNSNAT 460
           +LGKG FG V   ++       G+ +AVK+L  ++ + L +F+ EIE        N    
Sbjct: 17  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 461 IGANVKAFVREMKTFSDPTLSALL------HWEMRFNIII-----GIARGLLYLHQDSRL 509
            G    A  R +K   +      L      H E   +I +      I +G+ YL      
Sbjct: 77  KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK--- 133
Query: 510 RIIHRDLKTSNILLDQEMNPKISDFGLA 537
           R IHRDL T NIL++ E   KI DFGL 
Sbjct: 134 RYIHRDLATRNILVENENRVKIGDFGLT 161

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 66/148 (44%), Gaps = 25/148 (16%)
Query: 412 KLGKGGFGPVYKAKFP-----GGQQIAVKRLSSASGQGLEEFKNEIET------SNSNAT 460
           +LGKG FG V   ++       G+ +AVK+L  ++ + L +F+ EIE        N    
Sbjct: 22  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 81
Query: 461 IGANVKAFVREMKTFSDPTLSALL------HWEMRFNIII-----GIARGLLYLHQDSRL 509
            G    A  R +K   +      L      H E   +I +      I +G+ YL      
Sbjct: 82  KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK--- 138
Query: 510 RIIHRDLKTSNILLDQEMNPKISDFGLA 537
           R IHRDL T NIL++ E   KI DFGL 
Sbjct: 139 RYIHRDLATRNILVENENRVKIGDFGLT 166

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 66/148 (44%), Gaps = 25/148 (16%)
Query: 412 KLGKGGFGPVYKAKFP-----GGQQIAVKRLSSASGQGLEEFKNEIET------SNSNAT 460
           +LGKG FG V   ++       G+ +AVK+L  ++ + L +F+ EIE        N    
Sbjct: 23  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 82
Query: 461 IGANVKAFVREMKTFSDPTLSALL------HWEMRFNIII-----GIARGLLYLHQDSRL 509
            G    A  R +K   +      L      H E   +I +      I +G+ YL      
Sbjct: 83  KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK--- 139
Query: 510 RIIHRDLKTSNILLDQEMNPKISDFGLA 537
           R IHRDL T NIL++ E   KI DFGL 
Sbjct: 140 RYIHRDLATRNILVENENRVKIGDFGLT 167

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 69/151 (45%), Gaps = 19/151 (12%)
Query: 412 KLGKGGFGPVYKAKFPGGQQIAVKRLSSAS---------GQGLEEFKNEIETSNSNATIG 462
           KLG+G FG V+   + G  ++A+K L   +          Q +++ ++E +     A + 
Sbjct: 25  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE-KLVQLYAVVS 83
Query: 463 ANVKAFVREMKT------FSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDL 516
                 V E  +      F    +   L      ++   IA G+ Y+    R+  +HRDL
Sbjct: 84  EEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 140
Query: 517 KTSNILLDQEMNPKISDFGLALDMMDQKLHA 547
           + +NIL+ + +  K++DFGLA  + D +  A
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTA 171

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 66/148 (44%), Gaps = 25/148 (16%)
Query: 412 KLGKGGFGPVYKAKFP-----GGQQIAVKRLSSASGQGLEEFKNEIET------SNSNAT 460
           +LGKG FG V   ++       G+ +AVK+L  ++ + L +F+ EIE        N    
Sbjct: 24  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 83
Query: 461 IGANVKAFVREMKTFSDPTLSALL------HWEMRFNIII-----GIARGLLYLHQDSRL 509
            G    A  R +K   +      L      H E   +I +      I +G+ YL      
Sbjct: 84  KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK--- 140
Query: 510 RIIHRDLKTSNILLDQEMNPKISDFGLA 537
           R IHRDL T NIL++ E   KI DFGL 
Sbjct: 141 RYIHRDLATRNILVENENRVKIGDFGLT 168

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 66/148 (44%), Gaps = 25/148 (16%)
Query: 412 KLGKGGFGPVYKAKFP-----GGQQIAVKRLSSASGQGLEEFKNEIET------SNSNAT 460
           +LGKG FG V   ++       G+ +AVK+L  ++ + L +F+ EIE        N    
Sbjct: 35  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 461 IGANVKAFVREMKTFSDPTLSALL------HWEMRFNIII-----GIARGLLYLHQDSRL 509
            G    A  R +K   +      L      H E   +I +      I +G+ YL      
Sbjct: 95  KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK--- 151
Query: 510 RIIHRDLKTSNILLDQEMNPKISDFGLA 537
           R IHRDL T NIL++ E   KI DFGL 
Sbjct: 152 RYIHRDLATRNILVENENRVKIGDFGLT 179

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 69/151 (45%), Gaps = 19/151 (12%)
Query: 412 KLGKGGFGPVYKAKFPGGQQIAVKRLSSAS---------GQGLEEFKNEIETSNSNATIG 462
           KLG+G FG V+   + G  ++A+K L   +          Q +++ ++E +     A + 
Sbjct: 25  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE-KLVQLYAVVS 83
Query: 463 ANVKAFVREMKT------FSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDL 516
                 V E  +      F    +   L      ++   IA G+ Y+    R+  +HRDL
Sbjct: 84  EEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 140
Query: 517 KTSNILLDQEMNPKISDFGLALDMMDQKLHA 547
           + +NIL+ + +  K++DFGLA  + D +  A
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTA 171

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 66/148 (44%), Gaps = 25/148 (16%)
Query: 412 KLGKGGFGPVYKAKFP-----GGQQIAVKRLSSASGQGLEEFKNEIET------SNSNAT 460
           +LGKG FG V   ++       G+ +AVK+L  ++ + L +F+ EIE        N    
Sbjct: 17  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 461 IGANVKAFVREMKTFSDPTLSALL------HWEMRFNIII-----GIARGLLYLHQDSRL 509
            G    A  R +K   +      L      H E   +I +      I +G+ YL      
Sbjct: 77  KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK--- 133
Query: 510 RIIHRDLKTSNILLDQEMNPKISDFGLA 537
           R IHRDL T NIL++ E   KI DFGL 
Sbjct: 134 RYIHRDLATRNILVENENRVKIGDFGLT 161

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 66/148 (44%), Gaps = 25/148 (16%)
Query: 412 KLGKGGFGPVYKAKFP-----GGQQIAVKRLSSASGQGLEEFKNEIET------SNSNAT 460
           +LGKG FG V   ++       G+ +AVK+L  ++ + L +F+ EIE        N    
Sbjct: 21  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 80
Query: 461 IGANVKAFVREMKTFSDPTLSALL------HWEMRFNIII-----GIARGLLYLHQDSRL 509
            G    A  R +K   +      L      H E   +I +      I +G+ YL      
Sbjct: 81  KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK--- 137
Query: 510 RIIHRDLKTSNILLDQEMNPKISDFGLA 537
           R IHRDL T NIL++ E   KI DFGL 
Sbjct: 138 RYIHRDLATRNILVENENRVKIGDFGLT 165

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 69/151 (45%), Gaps = 19/151 (12%)
Query: 412 KLGKGGFGPVYKAKFPGGQQIAVKRLSSAS---------GQGLEEFKNEIETSNSNATIG 462
           KLG+G FG V+   + G  ++A+K L   +          Q +++ ++E +     A + 
Sbjct: 14  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE-KLVQLYAVVS 72
Query: 463 ANVKAFVREMKT------FSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDL 516
                 V E  +      F    +   L      ++   IA G+ Y+    R+  +HRDL
Sbjct: 73  EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 129
Query: 517 KTSNILLDQEMNPKISDFGLALDMMDQKLHA 547
           + +NIL+ + +  K++DFGLA  + D +  A
Sbjct: 130 RAANILVGENLVCKVADFGLARLIEDNEYTA 160

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 69/151 (45%), Gaps = 19/151 (12%)
Query: 412 KLGKGGFGPVYKAKFPGGQQIAVKRLSSAS---------GQGLEEFKNEIETSNSNATIG 462
           KLG+G FG V+   + G  ++A+K L   +          Q +++ ++E +     A + 
Sbjct: 16  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE-KLVQLYAVVS 74
Query: 463 ANVKAFVREMKT------FSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDL 516
                 V E  +      F    +   L      ++   IA G+ Y+    R+  +HRDL
Sbjct: 75  EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 131
Query: 517 KTSNILLDQEMNPKISDFGLALDMMDQKLHA 547
           + +NIL+ + +  K++DFGLA  + D +  A
Sbjct: 132 RAANILVGENLVCKVADFGLARLIEDNEYTA 162

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 66/148 (44%), Gaps = 25/148 (16%)
Query: 412 KLGKGGFGPVYKAKFP-----GGQQIAVKRLSSASGQGLEEFKNEIET------SNSNAT 460
           +LGKG FG V   ++       G+ +AVK+L  ++ + L +F+ EIE        N    
Sbjct: 48  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 107
Query: 461 IGANVKAFVREMKTFSDPTLSALL------HWEMRFNIII-----GIARGLLYLHQDSRL 509
            G    A  R +K   +      L      H E   +I +      I +G+ YL      
Sbjct: 108 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK--- 164
Query: 510 RIIHRDLKTSNILLDQEMNPKISDFGLA 537
           R IHRDL T NIL++ E   KI DFGL 
Sbjct: 165 RYIHRDLATRNILVENENRVKIGDFGLT 192

>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 26/166 (15%)
Query: 411 NKLGKGGFGPVYKAKFP-----GGQQIAVKRLSSASGQGLEEFKNEIETSNS-------- 457
           ++LGKG FG V   ++       G  +AVK+L  +      +F+ EI+   +        
Sbjct: 17  SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 76
Query: 458 --NATIGANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSR------- 508
               + G   ++    M+      L   L    R    +  +R LLY  Q  +       
Sbjct: 77  YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQ---RHRARLDASRLLLYSSQICKGMEYLGS 133
Query: 509 LRIIHRDLKTSNILLDQEMNPKISDFGLA-LDMMDQKLHASSKPNE 553
            R +HRDL   NIL++ E + KI+DFGLA L  +D+  +   +P +
Sbjct: 134 RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQ 179

>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 26/166 (15%)
Query: 411 NKLGKGGFGPVYKAKFP-----GGQQIAVKRLSSASGQGLEEFKNEIETSNS-------- 457
           ++LGKG FG V   ++       G  +AVK+L  +      +F+ EI+   +        
Sbjct: 29  SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 88
Query: 458 --NATIGANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSR------- 508
               + G   ++    M+      L   L    R    +  +R LLY  Q  +       
Sbjct: 89  YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQ---RHRARLDASRLLLYSSQICKGMEYLGS 145
Query: 509 LRIIHRDLKTSNILLDQEMNPKISDFGLA-LDMMDQKLHASSKPNE 553
            R +HRDL   NIL++ E + KI+DFGLA L  +D+  +   +P +
Sbjct: 146 RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQ 191

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 72/151 (47%), Gaps = 21/151 (13%)
Query: 405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRL------SSASGQGLEEFKNEIETSNS 457
           +NF +  K+G+G +G VYKA+    G+ +A+ ++             + E     E ++ 
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 458 NAT-----IGANVKAFV------REMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQD 506
           N       I    K ++      +++K F D +    +   +  + +  + +GL + H  
Sbjct: 63  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
              R++HRDLK  N+L++ E   K++DFGLA
Sbjct: 123 ---RVLHRDLKPQNLLINTEGAIKLADFGLA 150

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 72/151 (47%), Gaps = 21/151 (13%)
Query: 405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRL------SSASGQGLEEFKNEIETSNS 457
           +NF +  K+G+G +G VYKA+    G+ +A+ ++             + E     E ++ 
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 458 NAT-----IGANVKAFV------REMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQD 506
           N       I    K ++      +++K F D +    +   +  + +  + +GL + H  
Sbjct: 62  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
              R++HRDLK  N+L++ E   K++DFGLA
Sbjct: 122 ---RVLHRDLKPQNLLINTEGAIKLADFGLA 149

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 66/148 (44%), Gaps = 25/148 (16%)
Query: 412 KLGKGGFGPVYKAKFP-----GGQQIAVKRLSSASGQGLEEFKNEIET------SNSNAT 460
           +LGKG FG V   ++       G+ +AVK+L  ++ + L +F+ EIE        N    
Sbjct: 35  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 461 IGANVKAFVREMKTFSDPTLSALL------HWEMRFNIII-----GIARGLLYLHQDSRL 509
            G    A  R +K   +      L      H E   +I +      I +G+ YL      
Sbjct: 95  KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK--- 151
Query: 510 RIIHRDLKTSNILLDQEMNPKISDFGLA 537
           R IHRDL T NIL++ E   KI DFGL 
Sbjct: 152 RYIHRDLATRNILVENENRVKIGDFGLT 179

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 69/151 (45%), Gaps = 19/151 (12%)
Query: 412 KLGKGGFGPVYKAKFPGGQQIAVKRLSSAS---------GQGLEEFKNEIETSNSNATIG 462
           KLG+G FG V+   + G  ++A+K L   +          Q +++ ++E +     A + 
Sbjct: 25  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE-KLVQLYAVVS 83
Query: 463 ANVKAFVREMKT------FSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDL 516
                 V E  +      F    +   L      ++   IA G+ Y+    R+  +HRDL
Sbjct: 84  EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 140
Query: 517 KTSNILLDQEMNPKISDFGLALDMMDQKLHA 547
           + +NIL+ + +  K++DFGLA  + D +  A
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTA 171

>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 26/166 (15%)
Query: 411 NKLGKGGFGPVYKAKFP-----GGQQIAVKRLSSASGQGLEEFKNEIETSNS-------- 457
           ++LGKG FG V   ++       G  +AVK+L  +      +F+ EI+   +        
Sbjct: 16  SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 75
Query: 458 --NATIGANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSR------- 508
               + G   ++    M+      L   L    R    +  +R LLY  Q  +       
Sbjct: 76  YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQ---RHRARLDASRLLLYSSQICKGMEYLGS 132
Query: 509 LRIIHRDLKTSNILLDQEMNPKISDFGLA-LDMMDQKLHASSKPNE 553
            R +HRDL   NIL++ E + KI+DFGLA L  +D+  +   +P +
Sbjct: 133 RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQ 178

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 69/151 (45%), Gaps = 19/151 (12%)
Query: 412 KLGKGGFGPVYKAKFPGGQQIAVKRLSSAS---------GQGLEEFKNEIETSNSNATIG 462
           KLG+G FG V+   + G  ++A+K L   +          Q +++ ++E +     A + 
Sbjct: 25  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHE-KLVQLYAVVS 83
Query: 463 ANVKAFVREMKT------FSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDL 516
                 V E  +      F    +   L      ++   IA G+ Y+    R+  +HRDL
Sbjct: 84  EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 140
Query: 517 KTSNILLDQEMNPKISDFGLALDMMDQKLHA 547
           + +NIL+ + +  K++DFGLA  + D +  A
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTA 171

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 74/165 (44%), Gaps = 26/165 (15%)
Query: 412 KLGKGGFGPVYKAKFP-----GGQQIAVKRLSSASGQGLEEFKNEIET------SNSNAT 460
           +LGKG FG V   ++       G+ +AVK+L  ++ + L +F+ EIE        N    
Sbjct: 18  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 77
Query: 461 IGANVKAFVREMKTFSDPTLSALL------HWEMRFNIII-----GIARGLLYLHQDSRL 509
            G    A  R +K   +      L      H E   +I +      I +G+ YL      
Sbjct: 78  KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK--- 134
Query: 510 RIIHRDLKTSNILLDQEMNPKISDFGLALDM-MDQKLHASSKPNE 553
           R IHR+L T NIL++ E   KI DFGL   +  D++ +   +P E
Sbjct: 135 RYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGE 179

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 79/173 (45%), Gaps = 32/173 (18%)
Query: 404 TDNFSEANK-LGKGGFGPVYKAKFPGGQQ-IAVKRLSSASGQG-------LEEFKNEI-E 453
            DN  E  K +GKGGFG V+K +    +  +A+K L     +G        +EF+ E+  
Sbjct: 17  ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 454 TSNSNAT-------IGANVKAFVREMKTFSDPTLSAL-----LHWEMRFNIIIGIARGLL 501
            SN N         +  N    V E     D     L     + W ++  +++ IA G+ 
Sbjct: 77  MSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIE 136
Query: 502 YLHQDSRLRIIHRDLKTSNILLDQ--EMNP---KISDFGLALDMMDQKLHASS 549
           Y+ Q+    I+HRDL++ NI L    E  P   K++DFGL+     Q +H+ S
Sbjct: 137 YM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS----QQSVHSVS 184

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 69/151 (45%), Gaps = 19/151 (12%)
Query: 412 KLGKGGFGPVYKAKFPGGQQIAVKRLSSAS---------GQGLEEFKNEIETSNSNATIG 462
           KLG+G FG V+   + G  ++A+K L   +          Q +++ ++E +     A + 
Sbjct: 25  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE-KLVQLYAVVS 83
Query: 463 ANVKAFVREMKT------FSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDL 516
                 V E  +      F    +   L      ++   IA G+ Y+    R+  +HRDL
Sbjct: 84  EEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 140
Query: 517 KTSNILLDQEMNPKISDFGLALDMMDQKLHA 547
           + +NIL+ + +  K++DFGLA  + D +  A
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTA 171

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 69/151 (45%), Gaps = 19/151 (12%)
Query: 412 KLGKGGFGPVYKAKFPGGQQIAVKRLSSAS---------GQGLEEFKNEIETSNSNATIG 462
           KLG+G FG V+   + G  ++A+K L   +          Q +++ ++E +     A + 
Sbjct: 25  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE-KLVQLYAVVS 83
Query: 463 ANVKAFVREMKT------FSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDL 516
                 V E  +      F    +   L      ++   IA G+ Y+    R+  +HRDL
Sbjct: 84  EEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 140
Query: 517 KTSNILLDQEMNPKISDFGLALDMMDQKLHA 547
           + +NIL+ + +  K++DFGLA  + D +  A
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTA 171

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 68/151 (45%), Gaps = 19/151 (12%)
Query: 412 KLGKGGFGPVYKAKFPGGQQIAVKRLSSAS---------GQGLEEFKNEIETSNSNATIG 462
           KLG+G FG V+   + G  ++A+K L   +          Q +++ ++E +     A + 
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE-KLVQLYAVVS 249
Query: 463 ANVKAFVREMKT------FSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDL 516
                 V E  +      F        L      ++   IA G+ Y+    R+  +HRDL
Sbjct: 250 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 306
Query: 517 KTSNILLDQEMNPKISDFGLALDMMDQKLHA 547
           + +NIL+ + +  K++DFGLA  + D +  A
Sbjct: 307 RAANILVGENLVCKVADFGLARLIEDNEYTA 337

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 69/151 (45%), Gaps = 19/151 (12%)
Query: 412 KLGKGGFGPVYKAKFPGGQQIAVKRLSSAS---------GQGLEEFKNEIETSNSNATIG 462
           KLG+G FG V+   + G  ++A+K L   +          Q +++ ++E +     A + 
Sbjct: 25  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE-KLVQLYAVVS 83
Query: 463 ANVKAFVREMKT------FSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDL 516
                 V E  +      F    +   L      ++   IA G+ Y+    R+  +HRDL
Sbjct: 84  EEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 140
Query: 517 KTSNILLDQEMNPKISDFGLALDMMDQKLHA 547
           + +NIL+ + +  K++DFGLA  + D +  A
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEXTA 171

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 68/151 (45%), Gaps = 19/151 (12%)
Query: 412 KLGKGGFGPVYKAKFPGGQQIAVKRLSSAS---------GQGLEEFKNEIETSNSNATIG 462
           KLG+G FG V+   + G  ++A+K L   +          Q +++ ++E +     A + 
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE-KLVQLYAVVS 249
Query: 463 ANVKAFVREMKT------FSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDL 516
                 V E  +      F        L      ++   IA G+ Y+    R+  +HRDL
Sbjct: 250 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 306
Query: 517 KTSNILLDQEMNPKISDFGLALDMMDQKLHA 547
           + +NIL+ + +  K++DFGLA  + D +  A
Sbjct: 307 RAANILVGENLVCKVADFGLARLIEDNEYTA 337

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 68/151 (45%), Gaps = 19/151 (12%)
Query: 412 KLGKGGFGPVYKAKFPGGQQIAVKRLSSAS---------GQGLEEFKNEIETSNSNATIG 462
           KLG+G FG V+   + G  ++A+K L   +          Q +++ ++E +     A + 
Sbjct: 15  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE-KLVQLYAVVS 73
Query: 463 ANVKAFVREMKT------FSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDL 516
                 V E  +      F        L      ++   IA G+ Y+    R+  +HRDL
Sbjct: 74  EEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 130
Query: 517 KTSNILLDQEMNPKISDFGLALDMMDQKLHA 547
           + +NIL+ + +  K++DFGLA  + D +  A
Sbjct: 131 RAANILVGENLVCKVADFGLARLIEDNEXTA 161

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 70/164 (42%), Gaps = 32/164 (19%)
Query: 403 ATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVK-------------------------- 435
           AT  +    ++G G +G VYKA+ P  G  +A+K                          
Sbjct: 7   ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 436 RLSSASGQGLEEFKNEIETSNSNATIGANV--KAFVREMKTFSDPTLSALLHWEMRFNII 493
           RL +     +    +   TS ++  I   +  +   ++++T+ D      L  E   +++
Sbjct: 67  RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLM 126
Query: 494 IGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
               RGL +LH +    I+HRDLK  NIL+      K++DFGLA
Sbjct: 127 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLA 167

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 68/151 (45%), Gaps = 19/151 (12%)
Query: 412 KLGKGGFGPVYKAKFPGGQQIAVKRLSSAS---------GQGLEEFKNEIETSNSNATIG 462
           KLG+G FG V+   + G  ++A+K L   +          Q +++ ++E +     A + 
Sbjct: 25  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE-KLVQLYAVVS 83
Query: 463 ANVKAFVREMKT------FSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDL 516
                 V E  +      F    +   L      ++   IA G+ Y+    R+  +HRDL
Sbjct: 84  EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 140
Query: 517 KTSNILLDQEMNPKISDFGLALDMMDQKLHA 547
             +NIL+ + +  K++DFGLA  + D +  A
Sbjct: 141 AAANILVGENLVCKVADFGLARLIEDNEYTA 171

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 68/151 (45%), Gaps = 19/151 (12%)
Query: 412 KLGKGGFGPVYKAKFPGGQQIAVKRLSSAS---------GQGLEEFKNEIETSNSNATIG 462
           KLG+G FG V+   + G  ++A+K L   +          Q +++ ++E +     A + 
Sbjct: 18  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE-KLVQLYAVVS 76
Query: 463 ANVKAFVREMKT------FSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDL 516
                 V E  +      F        L      ++   IA G+ Y+    R+  +HRDL
Sbjct: 77  EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 133
Query: 517 KTSNILLDQEMNPKISDFGLALDMMDQKLHA 547
           + +NIL+ + +  K++DFGLA  + D +  A
Sbjct: 134 RAANILVGENLVCKVADFGLARLIEDNEYTA 164

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 68/151 (45%), Gaps = 19/151 (12%)
Query: 412 KLGKGGFGPVYKAKFPGGQQIAVKRLSSAS---------GQGLEEFKNEIETSNSNATIG 462
           KLG+G FG V+   + G  ++A+K L   +          Q +++ ++E +     A + 
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE-KLVQLYAVVS 249
Query: 463 ANVKAFVREMKT------FSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDL 516
                 V E  +      F        L      ++   IA G+ Y+    R+  +HRDL
Sbjct: 250 EEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 306
Query: 517 KTSNILLDQEMNPKISDFGLALDMMDQKLHA 547
           + +NIL+ + +  K++DFGLA  + D +  A
Sbjct: 307 RAANILVGENLVCKVADFGLARLIEDNEYTA 337

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 24/161 (14%)
Query: 398 ESILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSA------SGQGLEEFKN 450
           ++I    + +   + +G G +G V  A     G ++AVK+LS        + +   E + 
Sbjct: 11  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 451 EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI--------------IIGI 496
                + N     +V    R ++ F+D  L   L      NI              I  I
Sbjct: 71  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 130
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            RGL Y+H      IIHRDLK SN+ ++++   KI DFGLA
Sbjct: 131 LRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA 168

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 68/151 (45%), Gaps = 19/151 (12%)
Query: 412 KLGKGGFGPVYKAKFPGGQQIAVKRLSSAS---------GQGLEEFKNEIETSNSNATIG 462
           KLG+G FG V+   + G  ++A+K L   +          Q +++ ++E +     A + 
Sbjct: 274 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE-KLVQLYAVVS 332
Query: 463 ANVKAFVREMKT------FSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDL 516
                 V E  +      F        L      ++   IA G+ Y+    R+  +HRDL
Sbjct: 333 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 389
Query: 517 KTSNILLDQEMNPKISDFGLALDMMDQKLHA 547
           + +NIL+ + +  K++DFGLA  + D +  A
Sbjct: 390 RAANILVGENLVCKVADFGLARLIEDNEYTA 420

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 24/161 (14%)
Query: 398 ESILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSA------SGQGLEEFKN 450
           ++I    + +   + +G G +G V  A     G ++AVK+LS        + +   E + 
Sbjct: 15  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 451 EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI--------------IIGI 496
                + N     +V    R ++ F+D  L   L      NI              I  I
Sbjct: 75  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            RGL Y+H      IIHRDLK SN+ ++++   KI DFGLA
Sbjct: 135 LRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA 172

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 24/161 (14%)
Query: 398 ESILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSA------SGQGLEEFKN 450
           ++I    + +   + +G G +G V  A     G ++AVK+LS        + +   E + 
Sbjct: 34  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 93
Query: 451 EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI--------------IIGI 496
                + N     +V    R ++ F+D  L   L      NI              I  I
Sbjct: 94  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 153
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            RGL Y+H      IIHRDLK SN+ ++++   KI DFGLA
Sbjct: 154 LRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA 191

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 24/161 (14%)
Query: 398 ESILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSA------SGQGLEEFKN 450
           ++I    + +   + +G G +G V  A     G ++AVK+LS        + +   E + 
Sbjct: 35  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 94
Query: 451 EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI--------------IIGI 496
                + N     +V    R ++ F+D  L   L      NI              I  I
Sbjct: 95  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 154
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            RGL Y+H      IIHRDLK SN+ ++++   KI DFGLA
Sbjct: 155 LRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA 192

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 24/161 (14%)
Query: 398 ESILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSA------SGQGLEEFKN 450
           ++I    + +   + +G G +G V  A     G ++AVK+LS        + +   E + 
Sbjct: 21  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 80
Query: 451 EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI--------------IIGI 496
                + N     +V    R ++ F+D  L   L      NI              I  I
Sbjct: 81  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 140
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            RGL Y+H      IIHRDLK SN+ ++++   KI DFGLA
Sbjct: 141 LRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA 178

>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/217 (23%), Positives = 98/217 (45%), Gaps = 50/217 (23%)
Query: 360 NMAAPFYESARHVKDMVVDSDQFKEEEKQGIDLPFIDFESILAATDNFSEANKLGKGGFG 419
           ++++P  ++  H+     D      E  Q +    I   S++    +F+E   +G+G FG
Sbjct: 13  DISSPLLQNTVHI-----DLSALNPELVQAVQHVVIGPSSLIV---HFNEV--IGRGHFG 62
Query: 420 PVYKAKFPG--GQQI--AVKRLSSASGQG-LEEFKNE------IETSNSNATIG------ 462
            VY        G++I  AVK L+  +  G + +F  E          N  + +G      
Sbjct: 63  CVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSE 122
Query: 463 ------------ANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLR 510
                        +++ F+R      +PT+  L+ + ++      +A+G+ YL   +  +
Sbjct: 123 GSPLVVLPYMKHGDLRNFIRNET--HNPTVKDLIGFGLQ------VAKGMKYL---ASKK 171
Query: 511 IIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHA 547
            +HRDL   N +LD++   K++DFGLA DM D++ ++
Sbjct: 172 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS 208

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 24/161 (14%)
Query: 398 ESILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSA------SGQGLEEFKN 450
           ++I    + +   + +G G +G V  A     G ++AVK+LS        + +   E + 
Sbjct: 15  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 451 EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI--------------IIGI 496
                + N     +V    R ++ F+D  L   L      NI              I  I
Sbjct: 75  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            RGL Y+H      IIHRDLK SN+ ++++   KI DFGLA
Sbjct: 135 LRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA 172

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 24/161 (14%)
Query: 398 ESILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSA------SGQGLEEFKN 450
           ++I    + +   + +G G +G V  A     G ++AVK+LS        + +   E + 
Sbjct: 11  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 451 EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI--------------IIGI 496
                + N     +V    R ++ F+D  L   L      NI              I  I
Sbjct: 71  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 130
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            RGL Y+H      IIHRDLK SN+ ++++   KI DFGLA
Sbjct: 131 LRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA 168

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 24/161 (14%)
Query: 398 ESILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSA------SGQGLEEFKN 450
           ++I    + +   + +G G +G V  A     G ++AVK+LS        + +   E + 
Sbjct: 35  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 94
Query: 451 EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI--------------IIGI 496
                + N     +V    R ++ F+D  L   L      NI              I  I
Sbjct: 95  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 154
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            RGL Y+H      IIHRDLK SN+ ++++   KI DFGLA
Sbjct: 155 LRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA 192

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/151 (24%), Positives = 68/151 (45%), Gaps = 19/151 (12%)
Query: 412 KLGKGGFGPVYKAKFPGGQQIAVKRLSSAS---------GQGLEEFKNEIETSNSNATIG 462
           KLG+G FG V+   + G  ++A+K L   +          Q +++ ++E +     A + 
Sbjct: 192 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHE-KLVQLYAVVS 250
Query: 463 ANVKAFVREMKT------FSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDL 516
                 V E  +      F    +   L      ++   IA G+ Y+    R+  +HRDL
Sbjct: 251 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 307
Query: 517 KTSNILLDQEMNPKISDFGLALDMMDQKLHA 547
           + +NIL+ + +  K++DFGL   + D +  A
Sbjct: 308 RAANILVGENLVCKVADFGLGRLIEDNEYTA 338

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 24/161 (14%)
Query: 398 ESILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSA------SGQGLEEFKN 450
           ++I    + +   + +G G +G V  A     G ++AVK+LS        + +   E + 
Sbjct: 15  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 451 EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI--------------IIGI 496
                + N     +V    R ++ F+D  L   L      NI              I  I
Sbjct: 75  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            RGL Y+H      IIHRDLK SN+ ++++   KI DFGLA
Sbjct: 135 LRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA 172

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 24/161 (14%)
Query: 398 ESILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSA------SGQGLEEFKN 450
           ++I    + +   + +G G +G V  A     G ++AVK+LS        + +   E + 
Sbjct: 11  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 451 EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI--------------IIGI 496
                + N     +V    R ++ F+D  L   L      NI              I  I
Sbjct: 71  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQI 130
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            RGL Y+H      IIHRDLK SN+ ++++   KI DFGLA
Sbjct: 131 LRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA 168

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 75/182 (41%), Gaps = 29/182 (15%)
Query: 410 ANKLGKGGFGPVYKAKFPGGQQIAVKRL--SSASGQGLEEFKNEIETSNSNATIGANVKA 467
             +LG G FG V+   +    ++AVK L   + S Q   E  N ++T   +  +      
Sbjct: 18  VKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYA-V 76
Query: 468 FVREMKTF----------------SDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRI 511
             RE   +                SD     LL   + F+    IA G+ Y+    R   
Sbjct: 77  VTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSA--QIAEGMAYIE---RKNY 131
Query: 512 IHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSKPNEILK-----CINVGLLCVQ 566
           IHRDL+ +N+L+ + +  KI+DFGLA  + D +  A       +K      IN G   ++
Sbjct: 132 IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIK 191
Query: 567 ED 568
            D
Sbjct: 192 SD 193

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 93/209 (44%), Gaps = 45/209 (21%)
Query: 407 FSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIG-AN 464
           +    KLGKG +G V+K+     G+ +AVK++  A     +  +   E        G  N
Sbjct: 11  YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHEN 70
Query: 465 VKAFVREMKTFSDPTLSAL-------LHWEMRFNI---------IIGIARGLLYLHQDSR 508
           +   +  ++  +D  +  +       LH  +R NI         +  + + + YLH    
Sbjct: 71  IVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGG- 129
Query: 509 LRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSKPNEILKCINVGLLCVQED 568
             ++HRD+K SNILL+ E + K++DFGL+   ++ +   ++ P           L + E+
Sbjct: 130 --LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIP-----------LSINEN 176
Query: 569 P----NDRPTMSDVV---------IMLGS 584
                +D+P ++D V         I+LGS
Sbjct: 177 TENFDDDQPILTDYVATRWYRAPEILLGS 205

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 24/161 (14%)
Query: 398 ESILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSA------SGQGLEEFKN 450
           ++I    + +   + +G G +G V  A     G ++AVK+LS        + +   E + 
Sbjct: 20  KTIWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 79
Query: 451 EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI--------------IIGI 496
                + N     +V    R ++ F+D  L   L      NI              I  I
Sbjct: 80  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 139
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            RGL Y+H      IIHRDLK SN+ ++++   KI DFGLA
Sbjct: 140 LRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLA 177

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 68/151 (45%), Gaps = 19/151 (12%)
Query: 412 KLGKGGFGPVYKAKFPGGQQIAVKRLSSAS---------GQGLEEFKNEIETSNSNATIG 462
           KLG+G FG V+   + G  ++A+K L   +          Q +++ ++E +     A + 
Sbjct: 22  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE-KLVQLYAVVS 80
Query: 463 ANVKAFVRE------MKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDL 516
                 V E      +  F        L      ++   IA G+ Y+    R+  +HRDL
Sbjct: 81  EEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE---RMNYVHRDL 137
Query: 517 KTSNILLDQEMNPKISDFGLALDMMDQKLHA 547
           + +NIL+ + +  K++DFGLA  + D +  A
Sbjct: 138 RAANILVGENLVCKVADFGLARLIEDNEYTA 168

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 68/151 (45%), Gaps = 19/151 (12%)
Query: 412 KLGKGGFGPVYKAKFPGGQQIAVKRLSSAS---------GQGLEEFKNEIETSNSNATIG 462
           KLG+G FG V+   + G  ++A+K L   +          Q +++ ++E +     A + 
Sbjct: 22  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE-KLVQLYAVVS 80
Query: 463 ANVKAFVRE------MKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDL 516
                 V E      +  F        L      ++   IA G+ Y+    R+  +HRDL
Sbjct: 81  EEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE---RMNYVHRDL 137
Query: 517 KTSNILLDQEMNPKISDFGLALDMMDQKLHA 547
           + +NIL+ + +  K++DFGLA  + D +  A
Sbjct: 138 RAANILVGENLVCKVADFGLARLIEDNEWTA 168

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 71/167 (42%), Gaps = 24/167 (14%)
Query: 398 ESILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSA------SGQGLEEFKN 450
           ++I    + +   + +G G +G V  A     G ++AVK+LS        + +   E + 
Sbjct: 22  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 81
Query: 451 EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI--------------IIGI 496
                + N     +V    R ++ F+D  L   L      NI              I  I
Sbjct: 82  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 141
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQ 543
            RGL Y+H      IIHRDLK SN+ ++++   KI DFGLA    D+
Sbjct: 142 LRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADE 185

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 24/161 (14%)
Query: 398 ESILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSA------SGQGLEEFKN 450
           ++I    + +   + +G G +G V  A     G ++AVK+LS        + +   E + 
Sbjct: 20  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 79
Query: 451 EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI--------------IIGI 496
                + N     +V    R ++ F+D  L   L      NI              I  I
Sbjct: 80  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 139
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            RGL Y+H      IIHRDLK SN+ ++++   KI DFGLA
Sbjct: 140 LRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLA 177

>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/216 (23%), Positives = 97/216 (44%), Gaps = 50/216 (23%)
Query: 361 MAAPFYESARHVKDMVVDSDQFKEEEKQGIDLPFIDFESILAATDNFSEANKLGKGGFGP 420
           +++P  ++  H+     D      E  Q +    I   S++    +F+E   +G+G FG 
Sbjct: 15  ISSPLLQNTVHI-----DLSALNPELVQAVQHVVIGPSSLIV---HFNEV--IGRGHFGC 64
Query: 421 VYKAKFPG--GQQI--AVKRLSSASGQG-LEEFKNE------IETSNSNATIG------- 462
           VY        G++I  AVK L+  +  G + +F  E          N  + +G       
Sbjct: 65  VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 124
Query: 463 -----------ANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRI 511
                       +++ F+R      +PT+  L+ + ++      +A+G+ YL   +  + 
Sbjct: 125 SPLVVLPYMKHGDLRNFIRNET--HNPTVKDLIGFGLQ------VAKGMKYL---ASKKF 173
Query: 512 IHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHA 547
           +HRDL   N +LD++   K++DFGLA DM D++ ++
Sbjct: 174 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS 209

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 24/161 (14%)
Query: 398 ESILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSA------SGQGLEEFKN 450
           ++I    + +   + +G G +G V  A     G ++AVK+LS        + +   E + 
Sbjct: 26  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 85
Query: 451 EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI--------------IIGI 496
                + N     +V    R ++ F+D  L   L      NI              I  I
Sbjct: 86  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 145
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            RGL Y+H      IIHRDLK SN+ ++++   KI DFGLA
Sbjct: 146 LRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLA 183

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 68/161 (42%), Gaps = 24/161 (14%)
Query: 398 ESILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSA------SGQGLEEFKN 450
           ++I    + +     +G G +G V  A     G ++AVK+LS        + +   E + 
Sbjct: 25  KTIWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 84
Query: 451 EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI--------------IIGI 496
                + N     +V    R ++ F+D  L   L      NI              I  I
Sbjct: 85  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 144
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            RGL Y+H      IIHRDLK SN+ ++++   KI DFGLA
Sbjct: 145 LRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA 182

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 78/168 (46%), Gaps = 23/168 (13%)
Query: 402 AATDNFSEANKLGKGGFGPVY---KAKFP-GGQQIAVKRLSSASGQGLEEFKNEIE---T 454
           A   +F     LG+G FG V+   K   P  G   A+K L  A+ +  +  + ++E    
Sbjct: 25  ADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDIL 84
Query: 455 SNSNATIGANVK-AFVREMKTF------SDPTLSALLHWEMRFN------IIIGIARGLL 501
           ++ N      +  AF  E K +          L   L  E+ F        +  +A GL 
Sbjct: 85  ADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLD 144
Query: 502 YLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASS 549
           +LH    L II+RDLK  NILLD+E + K++DFGL+ + +D +  A S
Sbjct: 145 HLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS 189

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 71/167 (42%), Gaps = 24/167 (14%)
Query: 398 ESILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSA------SGQGLEEFKN 450
           ++I    + +   + +G G +G V  A     G ++AVK+LS        + +   E + 
Sbjct: 22  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 81
Query: 451 EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI--------------IIGI 496
                + N     +V    R ++ F+D  L   L      NI              I  I
Sbjct: 82  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 141
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQ 543
            RGL Y+H      IIHRDLK SN+ ++++   KI DFGLA    D+
Sbjct: 142 LRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADE 185

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 24/161 (14%)
Query: 398 ESILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSA------SGQGLEEFKN 450
           ++I    + +   + +G G +G V  A     G ++AVK+LS        + +   E + 
Sbjct: 27  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRL 86
Query: 451 EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI--------------IIGI 496
                + N     +V    R ++ F+D  L   L      NI              I  I
Sbjct: 87  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 146
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            RGL Y+H      IIHRDLK SN+ ++++   KI DFGLA
Sbjct: 147 LRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA 184

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 71/167 (42%), Gaps = 24/167 (14%)
Query: 398 ESILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSA------SGQGLEEFKN 450
           ++I    + +   + +G G +G V  A     G ++AVK+LS        + +   E + 
Sbjct: 22  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 81
Query: 451 EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI--------------IIGI 496
                + N     +V    R ++ F+D  L   L      NI              I  I
Sbjct: 82  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 141
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQ 543
            RGL Y+H      IIHRDLK SN+ ++++   KI DFGLA    D+
Sbjct: 142 LRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADE 185

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 24/161 (14%)
Query: 398 ESILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSA------SGQGLEEFKN 450
           ++I    + +   + +G G +G V  A     G ++AVK+LS        + +   E + 
Sbjct: 15  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 451 EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI--------------IIGI 496
                + N     +V    R ++ F+D  L   L      NI              I  I
Sbjct: 75  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            RGL Y+H      IIHRDLK SN+ ++++   KI DFGLA
Sbjct: 135 LRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA 172

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 24/161 (14%)
Query: 398 ESILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSA------SGQGLEEFKN 450
           ++I    + +   + +G G +G V  A     G ++AVK+LS        + +   E + 
Sbjct: 15  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 451 EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI--------------IIGI 496
                + N     +V    R ++ F+D  L   L      NI              I  I
Sbjct: 75  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            RGL Y+H      IIHRDLK SN+ ++++   KI DFGLA
Sbjct: 135 LRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA 172

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 24/161 (14%)
Query: 398 ESILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSA------SGQGLEEFKN 450
           ++I    + +   + +G G +G V  A     G ++AVK+LS        + +   E + 
Sbjct: 12  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 71
Query: 451 EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI--------------IIGI 496
                + N     +V    R ++ F+D  L   L      NI              I  I
Sbjct: 72  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 131
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            RGL Y+H      IIHRDLK SN+ ++++   KI DFGLA
Sbjct: 132 LRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA 169

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 24/161 (14%)
Query: 398 ESILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSA------SGQGLEEFKN 450
           ++I    + +   + +G G +G V  A     G ++AVK+LS        + +   E + 
Sbjct: 11  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 451 EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI--------------IIGI 496
                + N     +V    R ++ F+D  L   L      NI              I  I
Sbjct: 71  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 130
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            RGL Y+H      IIHRDLK SN+ ++++   KI DFGLA
Sbjct: 131 LRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA 168

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 24/161 (14%)
Query: 398 ESILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSA------SGQGLEEFKN 450
           ++I    + +   + +G G +G V  A     G ++AVK+LS        + +   E + 
Sbjct: 15  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 451 EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI--------------IIGI 496
                + N     +V    R ++ F+D  L   L      NI              I  I
Sbjct: 75  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            RGL Y+H      IIHRDLK SN+ ++++   KI DFGLA
Sbjct: 135 LRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA 172

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 24/161 (14%)
Query: 398 ESILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSA------SGQGLEEFKN 450
           ++I    + +   + +G G +G V  A     G ++AVK+LS        + +   E + 
Sbjct: 17  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 76
Query: 451 EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI--------------IIGI 496
                + N     +V    R ++ F+D  L   L      NI              I  I
Sbjct: 77  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 136
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            RGL Y+H      IIHRDLK SN+ ++++   KI DFGLA
Sbjct: 137 LRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA 174

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 24/161 (14%)
Query: 398 ESILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSA------SGQGLEEFKN 450
           ++I    + +   + +G G +G V  A     G ++AVK+LS        + +   E + 
Sbjct: 20  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 79
Query: 451 EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI--------------IIGI 496
                + N     +V    R ++ F+D  L   L      NI              I  I
Sbjct: 80  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 139
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            RGL Y+H      IIHRDLK SN+ ++++   KI DFGLA
Sbjct: 140 LRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA 177

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 24/161 (14%)
Query: 398 ESILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSA------SGQGLEEFKN 450
           ++I    + +   + +G G +G V  A     G ++AVK+LS        + +   E + 
Sbjct: 14  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 73
Query: 451 EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI--------------IIGI 496
                + N     +V    R ++ F+D  L   L      NI              I  I
Sbjct: 74  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 133
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            RGL Y+H      IIHRDLK SN+ ++++   KI DFGLA
Sbjct: 134 LRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA 171

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 24/161 (14%)
Query: 398 ESILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSA------SGQGLEEFKN 450
           ++I    + +   + +G G +G V  A     G ++AVK+LS        + +   E + 
Sbjct: 15  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 451 EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI--------------IIGI 496
                + N     +V    R ++ F+D  L   L      NI              I  I
Sbjct: 75  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            RGL Y+H      IIHRDLK SN+ ++++   KI DFGLA
Sbjct: 135 LRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA 172

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 24/161 (14%)
Query: 398 ESILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSA------SGQGLEEFKN 450
           ++I    + +   + +G G +G V  A     G ++AVK+LS        + +   E + 
Sbjct: 17  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 76
Query: 451 EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI--------------IIGI 496
                + N     +V    R ++ F+D  L   L      NI              I  I
Sbjct: 77  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 136
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            RGL Y+H      IIHRDLK SN+ ++++   KI DFGLA
Sbjct: 137 LRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA 174

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 24/161 (14%)
Query: 398 ESILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSA------SGQGLEEFKN 450
           ++I    + +   + +G G +G V  A     G ++AVK+LS        + +   E + 
Sbjct: 21  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 80
Query: 451 EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI--------------IIGI 496
                + N     +V    R ++ F+D  L   L      NI              I  I
Sbjct: 81  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 140
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            RGL Y+H      IIHRDLK SN+ ++++   KI DFGLA
Sbjct: 141 LRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA 178

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 24/161 (14%)
Query: 398 ESILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSA------SGQGLEEFKN 450
           ++I    + +   + +G G +G V  A     G ++AVK+LS        + +   E + 
Sbjct: 15  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 451 EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI--------------IIGI 496
                + N     +V    R ++ F+D  L   L      NI              I  I
Sbjct: 75  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQI 134
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            RGL Y+H      IIHRDLK SN+ ++++   KI DFGLA
Sbjct: 135 LRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLA 172

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 24/161 (14%)
Query: 398 ESILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSA------SGQGLEEFKN 450
           ++I    + +   + +G G +G V  A     G ++AVK+LS        + +   E + 
Sbjct: 22  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 81
Query: 451 EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI--------------IIGI 496
                + N     +V    R ++ F+D  L   L      NI              I  I
Sbjct: 82  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 141
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            RGL Y+H      IIHRDLK SN+ ++++   KI DFGLA
Sbjct: 142 LRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA 179

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 24/161 (14%)
Query: 398 ESILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSA------SGQGLEEFKN 450
           ++I    + +   + +G G +G V  A     G ++AVK+LS        + +   E + 
Sbjct: 15  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 451 EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI--------------IIGI 496
                + N     +V    R ++ F+D  L   L      NI              I  I
Sbjct: 75  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            RGL Y+H      IIHRDLK SN+ ++++   KI DFGLA
Sbjct: 135 LRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA 172

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 24/161 (14%)
Query: 398 ESILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSA------SGQGLEEFKN 450
           ++I    + +   + +G G +G V  A     G ++AVK+LS        + +   E + 
Sbjct: 17  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 76
Query: 451 EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI--------------IIGI 496
                + N     +V    R ++ F+D  L   L      NI              I  I
Sbjct: 77  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 136
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            RGL Y+H      IIHRDLK SN+ ++++   KI DFGLA
Sbjct: 137 LRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA 174

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 24/161 (14%)
Query: 398 ESILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSA------SGQGLEEFKN 450
           ++I    + +   + +G G +G V  A     G ++AVK+LS        + +   E + 
Sbjct: 15  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 451 EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI--------------IIGI 496
                + N     +V    R ++ F+D  L   L      NI              I  I
Sbjct: 75  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            RGL Y+H      IIHRDLK SN+ ++++   KI DFGLA
Sbjct: 135 LRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA 172

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 24/161 (14%)
Query: 398 ESILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSA------SGQGLEEFKN 450
           ++I    + +   + +G G +G V  A     G ++AVK+LS        + +   E + 
Sbjct: 12  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 71
Query: 451 EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI--------------IIGI 496
                + N     +V    R ++ F+D  L   L      NI              I  I
Sbjct: 72  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 131
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            RGL Y+H      IIHRDLK SN+ ++++   KI DFGLA
Sbjct: 132 LRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA 169

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 24/161 (14%)
Query: 398 ESILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSA------SGQGLEEFKN 450
           ++I    + +   + +G G +G V  A     G ++AVK+LS        + +   E + 
Sbjct: 15  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 451 EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI--------------IIGI 496
                + N     +V    R ++ F+D  L   L      NI              I  I
Sbjct: 75  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            RGL Y+H      IIHRDLK SN+ ++++   KI DFGLA
Sbjct: 135 LRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA 172

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 24/161 (14%)
Query: 398 ESILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSA------SGQGLEEFKN 450
           ++I    + +   + +G G +G V  A     G ++AVK+LS        + +   E + 
Sbjct: 38  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 97
Query: 451 EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI--------------IIGI 496
                + N     +V    R ++ F+D  L   L      NI              I  I
Sbjct: 98  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 157
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            RGL Y+H      IIHRDLK SN+ ++++   KI DFGLA
Sbjct: 158 LRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA 195

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 24/161 (14%)
Query: 398 ESILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSA------SGQGLEEFKN 450
           ++I    + +   + +G G +G V  A     G ++AVK+LS        + +   E + 
Sbjct: 27  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 86
Query: 451 EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI--------------IIGI 496
                + N     +V    R ++ F+D  L   L      NI              I  I
Sbjct: 87  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 146
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            RGL Y+H      IIHRDLK SN+ ++++   KI DFGLA
Sbjct: 147 LRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA 184

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 24/161 (14%)
Query: 398 ESILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSA------SGQGLEEFKN 450
           ++I    + +   + +G G +G V  A     G ++AVK+LS        + +   E + 
Sbjct: 27  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 86
Query: 451 EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI--------------IIGI 496
                + N     +V    R ++ F+D  L   L      NI              I  I
Sbjct: 87  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 146
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            RGL Y+H      IIHRDLK SN+ ++++   KI DFGLA
Sbjct: 147 LRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA 184

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 24/161 (14%)
Query: 398 ESILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSA------SGQGLEEFKN 450
           ++I    + +   + +G G +G V  A     G ++AVK+LS        + +   E + 
Sbjct: 21  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 80
Query: 451 EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI--------------IIGI 496
                + N     +V    R ++ F+D  L   L      NI              I  I
Sbjct: 81  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 140
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            RGL Y+H      IIHRDLK SN+ ++++   KI DFGLA
Sbjct: 141 LRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA 178

>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 82/172 (47%), Gaps = 30/172 (17%)
Query: 400 ILAATDNFSEANKLGKGGFGPVYKAKF-PGGQQI----AVKRLSSA-SGQGLEEFKNE-- 451
           IL  T+ F +   LG G FG VYK  + P G+++    A+K L  A S +  +E  +E  
Sbjct: 21  ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 79
Query: 452 ----IETSNSNATIGANVKAFVREMKTFSDPTLSALLHW----------EMRFNIIIGIA 497
               ++  +    +G  + + V+ +          LL +          +   N  + IA
Sbjct: 80  VMASVDNPHVCRLLGICLTSTVQLITQLM--PFGCLLDYVREHKDNIGSQYLLNWCVQIA 137
Query: 498 RGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA--LDMMDQKLHA 547
           +G+ YL +D RL  +HRDL   N+L+    + KI+DFGLA  L   +++ HA
Sbjct: 138 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 186

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 24/161 (14%)
Query: 398 ESILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSA------SGQGLEEFKN 450
           ++I    + +   + +G G +G V  A     G ++AVK+LS        + +   E + 
Sbjct: 26  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 85
Query: 451 EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI--------------IIGI 496
                + N     +V    R ++ F+D  L   L      NI              I  I
Sbjct: 86  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 145
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            RGL Y+H      IIHRDLK SN+ ++++   KI DFGLA
Sbjct: 146 LRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA 183

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           I   + Y HQ    RI+HRDLK  N+LLD +MN KI+DFG +
Sbjct: 123 IVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFS 161

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 24/161 (14%)
Query: 398 ESILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSA------SGQGLEEFKN 450
           ++I    + +   + +G G +G V  A     G ++AVK+LS        + +   E + 
Sbjct: 15  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 451 EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI--------------IIGI 496
                + N     +V    R ++ F+D  L   L      NI              I  I
Sbjct: 75  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            RGL Y+H      IIHRDLK SN+ ++++   KI DFGLA
Sbjct: 135 LRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA 172

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 24/161 (14%)
Query: 398 ESILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSA------SGQGLEEFKN 450
           ++I    + +   + +G G +G V  A     G ++AVK+LS        + +   E + 
Sbjct: 15  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 451 EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI--------------IIGI 496
                + N     +V    R ++ F+D  L   L      NI              I  I
Sbjct: 75  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            RGL Y+H      IIHRDLK SN+ ++++   KI DFGLA
Sbjct: 135 LRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA 172

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 67/153 (43%), Gaps = 37/153 (24%)
Query: 410 ANKLGKGGFGPVYKAK-FPGGQQIAVKRLSSASGQGLEEFKNEIE---TSNSNATI---- 461
             +LG G FG VYKAK    G   A K + + S + LE++  EIE   T +    +    
Sbjct: 24  VGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLG 83
Query: 462 ----------------GANVKAFVREM-KTFSDPTLSALLHWEMRFNIIIGIARGLLYLH 504
                           G  V A + E+ +  ++P +  +            +   L +LH
Sbjct: 84  AYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCR---------QMLEALNFLH 134
Query: 505 QDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
                RIIHRDLK  N+L+  E + +++DFG++
Sbjct: 135 SK---RIIHRDLKAGNVLMTLEGDIRLADFGVS 164

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 24/161 (14%)
Query: 398 ESILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSA------SGQGLEEFKN 450
           ++I    + +   + +G G +G V  A     G ++AVK+LS        + +   E + 
Sbjct: 13  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 72
Query: 451 EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI--------------IIGI 496
                + N     +V    R ++ F+D  L   L      NI              I  I
Sbjct: 73  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 132
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            RGL Y+H      IIHRDLK SN+ ++++   KI DFGLA
Sbjct: 133 LRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA 170

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 24/161 (14%)
Query: 398 ESILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSA------SGQGLEEFKN 450
           ++I    + +   + +G G +G V  A     G ++AVK+LS        + +   E + 
Sbjct: 35  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 94
Query: 451 EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI--------------IIGI 496
                + N     +V    R ++ F+D  L   L      NI              I  I
Sbjct: 95  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 154
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            RGL Y+H      IIHRDLK SN+ ++++   KI DFGLA
Sbjct: 155 LRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA 192

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           I   + Y HQ    RI+HRDLK  N+LLD +MN KI+DFG +
Sbjct: 120 IVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFS 158

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 24/161 (14%)
Query: 398 ESILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSA------SGQGLEEFKN 450
           ++I    + +   + +G G +G V  A     G ++AVK+LS        + +   E + 
Sbjct: 34  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 93
Query: 451 EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI--------------IIGI 496
                + N     +V    R ++ F+D  L   L      NI              I  I
Sbjct: 94  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 153
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            RGL Y+H      IIHRDLK SN+ ++++   KI DFGLA
Sbjct: 154 LRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA 191

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 24/161 (14%)
Query: 398 ESILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSA------SGQGLEEFKN 450
           ++I    + +   + +G G +G V  A     G ++AVK+LS        + +   E + 
Sbjct: 20  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 79
Query: 451 EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI--------------IIGI 496
                + N     +V    R ++ F+D  L   L      NI              I  I
Sbjct: 80  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 139
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            RGL Y+H      IIHRDLK SN+ ++++   KI DFGLA
Sbjct: 140 LRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA 177

>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 31/166 (18%)
Query: 397 FESILAATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSA------SGQGLEEFK 449
           F+      D +     +G G +G V  A+    GQQ+A+K++ +A      + + L E K
Sbjct: 47  FDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELK 106
Query: 450 NEIETSNSNATIGANVKAFVR------EMKT------FSDPTLSALLHWEMRFNI----- 492
                 + N      +K  +R      E K+        +  L  ++H      +     
Sbjct: 107 ILKHFKHDNII---AIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRY 163
Query: 493 -IIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            +  + RGL Y+H     ++IHRDLK SN+L+++    KI DFG+A
Sbjct: 164 FLYQLLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMA 206

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 67/153 (43%), Gaps = 37/153 (24%)
Query: 410 ANKLGKGGFGPVYKAK-FPGGQQIAVKRLSSASGQGLEEFKNEIE---TSNSNATI---- 461
             +LG G FG VYKAK    G   A K + + S + LE++  EIE   T +    +    
Sbjct: 16  VGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLG 75
Query: 462 ----------------GANVKAFVREM-KTFSDPTLSALLHWEMRFNIIIGIARGLLYLH 504
                           G  V A + E+ +  ++P +  +            +   L +LH
Sbjct: 76  AYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCR---------QMLEALNFLH 126
Query: 505 QDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
                RIIHRDLK  N+L+  E + +++DFG++
Sbjct: 127 SK---RIIHRDLKAGNVLMTLEGDIRLADFGVS 156

>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 82/172 (47%), Gaps = 30/172 (17%)
Query: 400 ILAATDNFSEANKLGKGGFGPVYKAKF-PGGQQI----AVKRLSSA-SGQGLEEFKNE-- 451
           IL  T+ F +   LG G FG VYK  + P G+++    A+K L  A S +  +E  +E  
Sbjct: 11  ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 452 ----IETSNSNATIGANVKAFVREMKTFSDPTLSALLHW----------EMRFNIIIGIA 497
               ++  +    +G  + + V+ +          LL +          +   N  + IA
Sbjct: 70  VMASVDNPHVCRLLGICLTSTVQLITQLM--PFGCLLDYVREHKDNIGSQYLLNWCVQIA 127
Query: 498 RGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA--LDMMDQKLHA 547
           +G+ YL +D RL  +HRDL   N+L+    + KI+DFGLA  L   +++ HA
Sbjct: 128 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176

>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 31/166 (18%)
Query: 397 FESILAATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSA------SGQGLEEFK 449
           F+      D +     +G G +G V  A+    GQQ+A+K++ +A      + + L E K
Sbjct: 46  FDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELK 105
Query: 450 NEIETSNSNATIGANVKAFVR------EMKT------FSDPTLSALLHWEMRFNI----- 492
                 + N      +K  +R      E K+        +  L  ++H      +     
Sbjct: 106 ILKHFKHDNII---AIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRY 162
Query: 493 -IIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            +  + RGL Y+H     ++IHRDLK SN+L+++    KI DFG+A
Sbjct: 163 FLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMA 205

>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 82/172 (47%), Gaps = 30/172 (17%)
Query: 400 ILAATDNFSEANKLGKGGFGPVYKAKF-PGGQQI----AVKRLSSA-SGQGLEEFKNE-- 451
           IL  T+ F +   LG G FG VYK  + P G+++    A+K L  A S +  +E  +E  
Sbjct: 5   ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 63
Query: 452 ----IETSNSNATIGANVKAFVREMKTFSDPTLSALLHW----------EMRFNIIIGIA 497
               ++  +    +G  + + V+ +          LL +          +   N  + IA
Sbjct: 64  VMASVDNPHVCRLLGICLTSTVQLITQLM--PFGCLLDYVREHKDNIGSQYLLNWCVQIA 121
Query: 498 RGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA--LDMMDQKLHA 547
           +G+ YL +D RL  +HRDL   N+L+    + KI+DFGLA  L   +++ HA
Sbjct: 122 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 170

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 24/161 (14%)
Query: 398 ESILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSA------SGQGLEEFKN 450
           ++I    + +   + +G G +G V  A     G ++AVK+LS        + +   E + 
Sbjct: 38  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 97
Query: 451 EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI--------------IIGI 496
                + N     +V    R ++ F+D  L   L      NI              I  I
Sbjct: 98  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 157
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            RGL Y+H      IIHRDLK SN+ ++++   KI DFGLA
Sbjct: 158 LRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA 195

>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 75/163 (46%), Gaps = 20/163 (12%)
Query: 411 NKLGKGGFGPVYKAKFP-----GGQQIAVKRLSSASGQGLEEFKNEIE---TSNSNATI- 461
           ++LGKG FG V   ++       G  +AVK+L  +      +F+ EI+     +S+  + 
Sbjct: 13  SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 72
Query: 462 --GANVKAFVREMKTFSDPTLSALLH-WEMRFNIIIGIARGLLYLHQDSR-------LRI 511
             G +      E++   +   S  L  +  R    +  +R LLY  Q  +        R 
Sbjct: 73  YRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRC 132
Query: 512 IHRDLKTSNILLDQEMNPKISDFGLA-LDMMDQKLHASSKPNE 553
           +HRDL   NIL++ E + KI+DFGLA L  +D+      +P +
Sbjct: 133 VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQ 175

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 24/161 (14%)
Query: 398 ESILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSA------SGQGLEEFKN 450
           ++I    + +   + +G G +G V  A     G ++AVK+LS        + +   E + 
Sbjct: 21  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 80
Query: 451 EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI--------------IIGI 496
                + N     +V    R ++ F+D  L   L      NI              I  I
Sbjct: 81  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 140
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            RGL Y+H      IIHRDLK SN+ ++++   KI DFGLA
Sbjct: 141 LRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLA 178

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 24/161 (14%)
Query: 398 ESILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSA------SGQGLEEFKN 450
           ++I    + +   + +G G +G V  A     G ++AVK+LS        + +   E + 
Sbjct: 17  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 76
Query: 451 EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI--------------IIGI 496
                + N     +V    R ++ F+D  L   L      NI              I  I
Sbjct: 77  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 136
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            RGL Y+H      IIHRDLK SN+ ++++   KI DFGLA
Sbjct: 137 LRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLA 174

>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 82/172 (47%), Gaps = 30/172 (17%)
Query: 400 ILAATDNFSEANKLGKGGFGPVYKAKF-PGGQQI----AVKRLSSA-SGQGLEEFKNE-- 451
           IL  T+ F +   LG G FG VYK  + P G+++    A+K L  A S +  +E  +E  
Sbjct: 14  ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 452 ----IETSNSNATIGANVKAFVREMKTFSDPTLSALLHW----------EMRFNIIIGIA 497
               ++  +    +G  + + V+ +          LL +          +   N  + IA
Sbjct: 73  VMASVDNPHVCRLLGICLTSTVQLITQLM--PFGCLLDYVREHKDNIGSQYLLNWCVQIA 130
Query: 498 RGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA--LDMMDQKLHA 547
           +G+ YL +D RL  +HRDL   N+L+    + KI+DFGLA  L   +++ HA
Sbjct: 131 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 179

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 24/161 (14%)
Query: 398 ESILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSA------SGQGLEEFKN 450
           ++I    + +   + +G G +G V  A     G ++AVK+LS        + +   E + 
Sbjct: 15  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 451 EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI--------------IIGI 496
                + N     +V    R ++ F+D  L   L      NI              I  I
Sbjct: 75  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQI 134
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            RGL Y+H      IIHRDLK SN+ ++++   KI DFGLA
Sbjct: 135 LRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA 172

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 74/167 (44%), Gaps = 24/167 (14%)
Query: 410 ANKLGKGGFGPVYKAK-FPGGQQIAVKRLSSASGQGLEEFKN-EIETSNSNATIGANVKA 467
            +KLG GG   VY A+      ++A+K +     +  E  K  E E  NS+     N+ +
Sbjct: 16  VDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVS 75
Query: 468 FVRE----------MKTFSDPTLSALL--HWEMRFNIIIG----IARGLLYLHQDSRLRI 511
            +            M+    PTLS  +  H  +  +  I     I  G+ + H    +RI
Sbjct: 76  MIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHD---MRI 132
Query: 512 IHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSKPNEILKCI 558
           +HRD+K  NIL+D     KI DFG+A  + +  L   ++ N +L  +
Sbjct: 133 VHRDIKPQNILIDSNKTLKIFDFGIAKALSETSL---TQTNHVLGTV 176

>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 82/172 (47%), Gaps = 30/172 (17%)
Query: 400 ILAATDNFSEANKLGKGGFGPVYKAKF-PGGQQI----AVKRLSSA-SGQGLEEFKNE-- 451
           IL  T+ F +   LG G FG VYK  + P G+++    A+K L  A S +  +E  +E  
Sbjct: 36  ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 94
Query: 452 ----IETSNSNATIGANVKAFVREMKTFSDPTLSALLHW----------EMRFNIIIGIA 497
               ++  +    +G  + + V+ +          LL +          +   N  + IA
Sbjct: 95  VMASVDNPHVCRLLGICLTSTVQLITQLM--PFGCLLDYVREHKDNIGSQYLLNWCVQIA 152
Query: 498 RGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA--LDMMDQKLHA 547
           +G+ YL +D RL  +HRDL   N+L+    + KI+DFGLA  L   +++ HA
Sbjct: 153 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 201

>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 82/172 (47%), Gaps = 30/172 (17%)
Query: 400 ILAATDNFSEANKLGKGGFGPVYKAKF-PGGQQI----AVKRLSSA-SGQGLEEFKNE-- 451
           IL  T+ F +   LG G FG VYK  + P G+++    A+K L  A S +  +E  +E  
Sbjct: 11  ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 452 ----IETSNSNATIGANVKAFVREMKTFSDPTLSALLHW----------EMRFNIIIGIA 497
               ++  +    +G  + + V+ +          LL +          +   N  + IA
Sbjct: 70  VMASVDNPHVCRLLGICLTSTVQLITQLM--PFGCLLDYVREHKDNIGSQYLLNWCVQIA 127
Query: 498 RGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA--LDMMDQKLHA 547
           +G+ YL +D RL  +HRDL   N+L+    + KI+DFGLA  L   +++ HA
Sbjct: 128 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 31/173 (17%)
Query: 403 ATDNFSEANKLGKGGFGPVYKAKFPGGQQ-IAVKRLSSASGQG-------LEEFKNEI-E 453
           A +      ++GKGGFG V+K +    +  +A+K L     +G        +EF+ E+  
Sbjct: 17  ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 454 TSNSNAT-------IGANVKAFVREMKTFSDPTLSAL-----LHWEMRFNIIIGIARGLL 501
            SN N         +  N    V E     D     L     + W ++  +++ IA G+ 
Sbjct: 77  MSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIE 136
Query: 502 YLHQDSRLRIIHRDLKTSNILLDQ--EMNP---KISDFGLALDMMDQKLHASS 549
           Y+ Q+    I+HRDL++ NI L    E  P   K++DFG +     Q +H+ S
Sbjct: 137 YM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS----QQSVHSVS 184

>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 82/172 (47%), Gaps = 30/172 (17%)
Query: 400 ILAATDNFSEANKLGKGGFGPVYKAKF-PGGQQI----AVKRLSSA-SGQGLEEFKNE-- 451
           IL  T+ F +   LG G FG VYK  + P G+++    A+K L  A S +  +E  +E  
Sbjct: 13  ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 452 ----IETSNSNATIGANVKAFVREMKTFSDPTLSALLHW----------EMRFNIIIGIA 497
               ++  +    +G  + + V+ +          LL +          +   N  + IA
Sbjct: 72  VMASVDNPHVCRLLGICLTSTVQLITQLM--PFGCLLDYVREHKDNIGSQYLLNWCVQIA 129
Query: 498 RGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA--LDMMDQKLHA 547
           +G+ YL +D RL  +HRDL   N+L+    + KI+DFGLA  L   +++ HA
Sbjct: 130 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 178

>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 82/172 (47%), Gaps = 30/172 (17%)
Query: 400 ILAATDNFSEANKLGKGGFGPVYKAKF-PGGQQI----AVKRLSSA-SGQGLEEFKNE-- 451
           IL  T+ F +   LG G FG VYK  + P G+++    A+K L  A S +  +E  +E  
Sbjct: 18  ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 452 ----IETSNSNATIGANVKAFVREMKTFSDPTLSALLHW----------EMRFNIIIGIA 497
               ++  +    +G  + + V+ +          LL +          +   N  + IA
Sbjct: 77  VMASVDNPHVCRLLGICLTSTVQLITQLM--PFGCLLDYVREHKDNIGSQYLLNWCVQIA 134
Query: 498 RGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA--LDMMDQKLHA 547
           +G+ YL +D RL  +HRDL   N+L+    + KI+DFGLA  L   +++ HA
Sbjct: 135 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 183

>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 82/172 (47%), Gaps = 30/172 (17%)
Query: 400 ILAATDNFSEANKLGKGGFGPVYKAKF-PGGQQI----AVKRLSSA-SGQGLEEFKNE-- 451
           IL  T+ F +   LG G FG VYK  + P G+++    A+K L  A S +  +E  +E  
Sbjct: 15  ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 73
Query: 452 ----IETSNSNATIGANVKAFVREMKTFSDPTLSALLHW----------EMRFNIIIGIA 497
               ++  +    +G  + + V+ +          LL +          +   N  + IA
Sbjct: 74  VMASVDNPHVCRLLGICLTSTVQLIMQLM--PFGCLLDYVREHKDNIGSQYLLNWCVQIA 131
Query: 498 RGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA--LDMMDQKLHA 547
           +G+ YL +D RL  +HRDL   N+L+    + KI+DFGLA  L   +++ HA
Sbjct: 132 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 180

>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 82/172 (47%), Gaps = 30/172 (17%)
Query: 400 ILAATDNFSEANKLGKGGFGPVYKAKF-PGGQQI----AVKRLSSA-SGQGLEEFKNE-- 451
           IL  T+ F +   LG G FG VYK  + P G+++    A+K L  A S +  +E  +E  
Sbjct: 17  ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 75
Query: 452 ----IETSNSNATIGANVKAFVREMKTFSDPTLSALLHW----------EMRFNIIIGIA 497
               ++  +    +G  + + V+ +          LL +          +   N  + IA
Sbjct: 76  VMASVDNPHVCRLLGICLTSTVQLITQLM--PFGCLLDYVREHKDNIGSQYLLNWCVQIA 133
Query: 498 RGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA--LDMMDQKLHA 547
           +G+ YL +D RL  +HRDL   N+L+    + KI+DFGLA  L   +++ HA
Sbjct: 134 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 182

>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 82/172 (47%), Gaps = 30/172 (17%)
Query: 400 ILAATDNFSEANKLGKGGFGPVYKAKF-PGGQQI----AVKRLSSA-SGQGLEEFKNE-- 451
           IL  T+ F +   LG G FG VYK  + P G+++    A+K L  A S +  +E  +E  
Sbjct: 14  ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 452 ----IETSNSNATIGANVKAFVREMKTFSDPTLSALLHW----------EMRFNIIIGIA 497
               ++  +    +G  + + V+ +          LL +          +   N  + IA
Sbjct: 73  VMASVDNPHVCRLLGICLTSTVQLITQLM--PFGCLLDYVREHKDNIGSQYLLNWCVQIA 130
Query: 498 RGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA--LDMMDQKLHA 547
           +G+ YL +D RL  +HRDL   N+L+    + KI+DFGLA  L   +++ HA
Sbjct: 131 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 179

>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 82/172 (47%), Gaps = 30/172 (17%)
Query: 400 ILAATDNFSEANKLGKGGFGPVYKAKF-PGGQQI----AVKRLSSA-SGQGLEEFKNE-- 451
           IL  T+ F +   LG G FG VYK  + P G+++    A+K L  A S +  +E  +E  
Sbjct: 11  ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 452 ----IETSNSNATIGANVKAFVREMKTFSDPTLSALLHW----------EMRFNIIIGIA 497
               ++  +    +G  + + V+ +          LL +          +   N  + IA
Sbjct: 70  VMASVDNPHVCRLLGICLTSTVQLITQLM--PFGXLLDYVREHKDNIGSQYLLNWCVQIA 127
Query: 498 RGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA--LDMMDQKLHA 547
           +G+ YL +D RL  +HRDL   N+L+    + KI+DFGLA  L   +++ HA
Sbjct: 128 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 71/174 (40%), Gaps = 50/174 (28%)
Query: 399 SILAATD------NFSEANKLGKGGFGPVYKAK-FPGGQQIAVKRLSSASGQGLEEFKNE 451
           SI +ATD      N+     +GKG F  V  A+    G+++AVK                
Sbjct: 3   SITSATDEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKI--------------- 47
Query: 452 IETSNSNATIGANVKAFVREMKTFSDPTLSAL---LHWEMRFNIIIGIARG---LLYLHQ 505
           I+ +  N T    +   VR MK  + P +  L   +  E    +++  A G     YL  
Sbjct: 48  IDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVA 107
Query: 506 DSRLR----------------------IIHRDLKTSNILLDQEMNPKISDFGLA 537
             R++                      I+HRDLK  N+LLD +MN KI+DFG +
Sbjct: 108 HGRMKEKEARAKFRQIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFS 161

>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 82/172 (47%), Gaps = 30/172 (17%)
Query: 400 ILAATDNFSEANKLGKGGFGPVYKAKF-PGGQQI----AVKRLSSA-SGQGLEEFKNE-- 451
           IL  T+ F +   LG G FG VYK  + P G+++    A+K L  A S +  +E  +E  
Sbjct: 14  ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 452 ----IETSNSNATIGANVKAFVREMKTFSDPTLSALLHW----------EMRFNIIIGIA 497
               ++  +    +G  + + V+ +          LL +          +   N  + IA
Sbjct: 73  VMASVDNPHVCRLLGICLTSTVQLITQLM--PFGCLLDYVREHKDNIGSQYLLNWCVQIA 130
Query: 498 RGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA--LDMMDQKLHA 547
           +G+ YL +D RL  +HRDL   N+L+    + KI+DFGLA  L   +++ HA
Sbjct: 131 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 179

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 31/173 (17%)
Query: 403 ATDNFSEANKLGKGGFGPVYKAKFPGGQQ-IAVKRLSSASGQG-------LEEFKNEI-E 453
           A +      ++GKGGFG V+K +    +  +A+K L     +G        +EF+ E+  
Sbjct: 17  ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 454 TSNSNAT-------IGANVKAFVREMKTFSDPTLSAL-----LHWEMRFNIIIGIARGLL 501
            SN N         +  N    V E     D     L     + W ++  +++ IA G+ 
Sbjct: 77  MSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIE 136
Query: 502 YLHQDSRLRIIHRDLKTSNILLDQ--EMNP---KISDFGLALDMMDQKLHASS 549
           Y+ Q+    I+HRDL++ NI L    E  P   K++DF L+     Q +H+ S
Sbjct: 137 YM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS----QQSVHSVS 184

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 69/163 (42%), Gaps = 28/163 (17%)
Query: 398 ESILAATDNFSEANKLGKGGFGPV---YKAKFPGGQQIAVKRLSSA------SGQGLEEF 448
           ++I    + +   + +G G +G V   Y  K   G +IAVK+LS        + +   E 
Sbjct: 44  KTIWEVPERYQTLSPVGSGAYGSVCSSYDVK--SGLKIAVKKLSRPFQSIIHAKRTYREL 101
Query: 449 KNEIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI--------------II 494
           +      + N     +V      ++ F+D  L   L      NI              I 
Sbjct: 102 RLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 161
Query: 495 GIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            I RGL Y+H      IIHRDLK SN+ ++++   KI DFGLA
Sbjct: 162 QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA 201

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 78/168 (46%), Gaps = 23/168 (13%)
Query: 402 AATDNFSEANKLGKGGFGPVYKAKFPGG----QQIAVKRLSSASGQGLEEFKNEIETSNS 457
           A    F     LG+G FG V+  K   G    Q  A+K L  A+ +  +  + ++E    
Sbjct: 21  ADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKME---R 77
Query: 458 NATIGANVKAFVREMKTF-SDPTLSALLHWEMRFNIIIGIARGLLYLHQDSR-------- 508
           +  +  N    V+    F ++  L  +L +    ++   +++ +++  +D +        
Sbjct: 78  DILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELAL 137
Query: 509 -------LRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASS 549
                  L II+RDLK  NILLD+E + K++DFGL+ + +D +  A S
Sbjct: 138 ALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS 185

>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 82/172 (47%), Gaps = 30/172 (17%)
Query: 400 ILAATDNFSEANKLGKGGFGPVYKAKF-PGGQQI----AVKRLSSA-SGQGLEEFKNE-- 451
           IL  T+ F +   LG G FG VYK  + P G+++    A+K L  A S +  +E  +E  
Sbjct: 12  ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 70
Query: 452 ----IETSNSNATIGANVKAFVREMKTFSDPTLSALLHW----------EMRFNIIIGIA 497
               ++  +    +G  + + V+ +          LL +          +   N  + IA
Sbjct: 71  VMASVDNPHVCRLLGICLTSTVQLIMQLM--PFGCLLDYVREHKDNIGSQYLLNWCVQIA 128
Query: 498 RGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA--LDMMDQKLHA 547
           +G+ YL +D RL  +HRDL   N+L+    + KI+DFGLA  L   +++ HA
Sbjct: 129 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 177

>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 82/172 (47%), Gaps = 30/172 (17%)
Query: 400 ILAATDNFSEANKLGKGGFGPVYKAKF-PGGQQI----AVKRLSSA-SGQGLEEFKNE-- 451
           IL  T+ F +   LG G FG VYK  + P G+++    A+K L  A S +  +E  +E  
Sbjct: 11  ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 452 ----IETSNSNATIGANVKAFVREMKTFSDPTLSALLHW----------EMRFNIIIGIA 497
               ++  +    +G  + + V+ +          LL +          +   N  + IA
Sbjct: 70  VMASVDNPHVCRLLGICLTSTVQLIMQLM--PFGCLLDYVREHKDNIGSQYLLNWCVQIA 127
Query: 498 RGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA--LDMMDQKLHA 547
           +G+ YL +D RL  +HRDL   N+L+    + KI+DFGLA  L   +++ HA
Sbjct: 128 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176

>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 90/200 (45%), Gaps = 45/200 (22%)
Query: 377 VDSDQFKEEEKQGIDLPFIDFESILAATDNFSEANKLGKGGFGPVYKAKFPG--GQQI-- 432
           +D      E  Q +    I   S++    +F+E   +G+G FG VY        G++I  
Sbjct: 7   IDLSALNPELVQAVQHVVIGPSSLIV---HFNEV--IGRGHFGCVYHGTLLDNDGKKIHC 61
Query: 433 AVKRLSSASGQG-LEEFKNE------IETSNSNATIG------------------ANVKA 467
           AVK L+  +  G + +F  E          N  + +G                   +++ 
Sbjct: 62  AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 121
Query: 468 FVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEM 527
           F+R      +PT+  L+ + ++      +A+G+ YL   +  + +HRDL   N +LD++ 
Sbjct: 122 FIRNET--HNPTVKDLIGFGLQ------VAKGMKYL---ASKKFVHRDLAARNCMLDEKF 170
Query: 528 NPKISDFGLALDMMDQKLHA 547
             K++DFGLA DM D++ ++
Sbjct: 171 TVKVADFGLARDMYDKEYYS 190

>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 82/172 (47%), Gaps = 30/172 (17%)
Query: 400 ILAATDNFSEANKLGKGGFGPVYKAKF-PGGQQI----AVKRLSSA-SGQGLEEFKNE-- 451
           IL  T+ F +   LG G FG VYK  + P G+++    A+K L  A S +  +E  +E  
Sbjct: 14  ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 452 ----IETSNSNATIGANVKAFVREMKTFSDPTLSALLHW----------EMRFNIIIGIA 497
               ++  +    +G  + + V+ +          LL +          +   N  + IA
Sbjct: 73  VMASVDNPHVCRLLGICLTSTVQLIMQLM--PFGCLLDYVREHKDNIGSQYLLNWCVQIA 130
Query: 498 RGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA--LDMMDQKLHA 547
           +G+ YL +D RL  +HRDL   N+L+    + KI+DFGLA  L   +++ HA
Sbjct: 131 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 179

>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 82/172 (47%), Gaps = 30/172 (17%)
Query: 400 ILAATDNFSEANKLGKGGFGPVYKAKF-PGGQQI----AVKRLSSA-SGQGLEEFKNE-- 451
           IL  T+ F +   LG G FG VYK  + P G+++    A+K L  A S +  +E  +E  
Sbjct: 13  ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 452 ----IETSNSNATIGANVKAFVREMKTFSDPTLSALLHW----------EMRFNIIIGIA 497
               ++  +    +G  + + V+ +          LL +          +   N  + IA
Sbjct: 72  VMASVDNPHVCRLLGICLTSTVQLIMQLM--PFGCLLDYVREHKDNIGSQYLLNWCVQIA 129
Query: 498 RGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA--LDMMDQKLHA 547
           +G+ YL +D RL  +HRDL   N+L+    + KI+DFGLA  L   +++ HA
Sbjct: 130 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 178

>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 82/172 (47%), Gaps = 30/172 (17%)
Query: 400 ILAATDNFSEANKLGKGGFGPVYKAKF-PGGQQI----AVKRLSSA-SGQGLEEFKNE-- 451
           IL  T+ F +   LG G FG VYK  + P G+++    A+K L  A S +  +E  +E  
Sbjct: 12  ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 70
Query: 452 ----IETSNSNATIGANVKAFVREMKTFSDPTLSALLHW----------EMRFNIIIGIA 497
               ++  +    +G  + + V+ +          LL +          +   N  + IA
Sbjct: 71  VMASVDNPHVCRLLGICLTSTVQLIMQLM--PFGXLLDYVREHKDNIGSQYLLNWCVQIA 128
Query: 498 RGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA--LDMMDQKLHA 547
           +G+ YL +D RL  +HRDL   N+L+    + KI+DFGLA  L   +++ HA
Sbjct: 129 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 177

>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 90/200 (45%), Gaps = 45/200 (22%)
Query: 377 VDSDQFKEEEKQGIDLPFIDFESILAATDNFSEANKLGKGGFGPVYKAKFPG--GQQI-- 432
           +D      E  Q +    I   S++    +F+E   +G+G FG VY        G++I  
Sbjct: 6   IDLSALNPELVQAVQHVVIGPSSLIV---HFNEV--IGRGHFGCVYHGTLLDNDGKKIHC 60
Query: 433 AVKRLSSASGQG-LEEFKNE------IETSNSNATIG------------------ANVKA 467
           AVK L+  +  G + +F  E          N  + +G                   +++ 
Sbjct: 61  AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 120
Query: 468 FVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEM 527
           F+R      +PT+  L+ + ++      +A+G+ YL   +  + +HRDL   N +LD++ 
Sbjct: 121 FIRNET--HNPTVKDLIGFGLQ------VAKGMKYL---ASKKFVHRDLAARNCMLDEKF 169
Query: 528 NPKISDFGLALDMMDQKLHA 547
             K++DFGLA DM D++ ++
Sbjct: 170 TVKVADFGLARDMYDKEYYS 189

>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 90/200 (45%), Gaps = 45/200 (22%)
Query: 377 VDSDQFKEEEKQGIDLPFIDFESILAATDNFSEANKLGKGGFGPVYKAKFPG--GQQI-- 432
           +D      E  Q +    I   S++    +F+E   +G+G FG VY        G++I  
Sbjct: 2   IDLSALNPELVQAVQHVVIGPSSLIV---HFNEV--IGRGHFGCVYHGTLLDNDGKKIHC 56
Query: 433 AVKRLSSASGQG-LEEFKNE------IETSNSNATIG------------------ANVKA 467
           AVK L+  +  G + +F  E          N  + +G                   +++ 
Sbjct: 57  AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 116
Query: 468 FVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEM 527
           F+R      +PT+  L+ + ++      +A+G+ YL   +  + +HRDL   N +LD++ 
Sbjct: 117 FIRNET--HNPTVKDLIGFGLQ------VAKGMKYL---ASKKFVHRDLAARNCMLDEKF 165
Query: 528 NPKISDFGLALDMMDQKLHA 547
             K++DFGLA DM D++ ++
Sbjct: 166 TVKVADFGLARDMYDKEYYS 185

>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 90/200 (45%), Gaps = 45/200 (22%)
Query: 377 VDSDQFKEEEKQGIDLPFIDFESILAATDNFSEANKLGKGGFGPVYKAKFPG--GQQI-- 432
           +D      E  Q +    I   S++    +F+E   +G+G FG VY        G++I  
Sbjct: 7   IDLSALNPELVQAVQHVVIGPSSLIV---HFNEV--IGRGHFGCVYHGTLLDNDGKKIHC 61
Query: 433 AVKRLSSASGQG-LEEFKNE------IETSNSNATIG------------------ANVKA 467
           AVK L+  +  G + +F  E          N  + +G                   +++ 
Sbjct: 62  AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 121
Query: 468 FVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEM 527
           F+R      +PT+  L+ + ++      +A+G+ YL   +  + +HRDL   N +LD++ 
Sbjct: 122 FIRNET--HNPTVKDLIGFGLQ------VAKGMKYL---ASKKFVHRDLAARNCMLDEKF 170
Query: 528 NPKISDFGLALDMMDQKLHA 547
             K++DFGLA DM D++ ++
Sbjct: 171 TVKVADFGLARDMYDKEYYS 190

>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 90/200 (45%), Gaps = 45/200 (22%)
Query: 377 VDSDQFKEEEKQGIDLPFIDFESILAATDNFSEANKLGKGGFGPVYKAKFPG--GQQI-- 432
           +D      E  Q +    I   S++    +F+E   +G+G FG VY        G++I  
Sbjct: 5   IDLSALNPELVQAVQHVVIGPSSLIV---HFNEV--IGRGHFGCVYHGTLLDNDGKKIHC 59
Query: 433 AVKRLSSASGQG-LEEFKNE------IETSNSNATIG------------------ANVKA 467
           AVK L+  +  G + +F  E          N  + +G                   +++ 
Sbjct: 60  AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 119
Query: 468 FVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEM 527
           F+R      +PT+  L+ + ++      +A+G+ YL   +  + +HRDL   N +LD++ 
Sbjct: 120 FIRNET--HNPTVKDLIGFGLQ------VAKGMKYL---ASKKFVHRDLAARNCMLDEKF 168
Query: 528 NPKISDFGLALDMMDQKLHA 547
             K++DFGLA DM D++ ++
Sbjct: 169 TVKVADFGLARDMYDKEYYS 188

>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 90/200 (45%), Gaps = 45/200 (22%)
Query: 377 VDSDQFKEEEKQGIDLPFIDFESILAATDNFSEANKLGKGGFGPVYKAKFPG--GQQI-- 432
           +D      E  Q +    I   S++    +F+E   +G+G FG VY        G++I  
Sbjct: 4   IDLSALNPELVQAVQHVVIGPSSLIV---HFNEV--IGRGHFGCVYHGTLLDNDGKKIHC 58
Query: 433 AVKRLSSASGQG-LEEFKNE------IETSNSNATIG------------------ANVKA 467
           AVK L+  +  G + +F  E          N  + +G                   +++ 
Sbjct: 59  AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 118
Query: 468 FVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEM 527
           F+R      +PT+  L+ + ++      +A+G+ YL   +  + +HRDL   N +LD++ 
Sbjct: 119 FIRNET--HNPTVKDLIGFGLQ------VAKGMKYL---ASKKFVHRDLAARNCMLDEKF 167
Query: 528 NPKISDFGLALDMMDQKLHA 547
             K++DFGLA DM D++ ++
Sbjct: 168 TVKVADFGLARDMYDKEYYS 187

>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution Length = 336

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 70/164 (42%), Gaps = 24/164 (14%)
Query: 405 DNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKN-----EIETSNSNA 459
           DN      +G+G +G VYK      + +AVK  S A+ Q     KN      +E  N   
Sbjct: 13  DNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIAR 71
Query: 460 TIGANVKA-------FVREMKTFSDPTLSALLH-----WEMRFNIIIGIARGLLYLHQD- 506
            I  + +        ++  M+ + + +L   L      W     +   + RGL YLH + 
Sbjct: 72  FIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTEL 131
Query: 507 -----SRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKL 545
                 +  I HRDL + N+L+  +    ISDFGL++ +   +L
Sbjct: 132 PRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRL 175

>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin Length = 330

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 74/174 (42%), Gaps = 31/174 (17%)
Query: 389 GIDLPFIDFESILAATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEF 448
           G  LPF+  +  +A      E   +GKG +G V++  + G + +AVK  SS   +  + +
Sbjct: 24  GSGLPFL-VQRTVARQITLLEC--VGKGRYGEVWRGSWQG-ENVAVKIFSS---RDEKSW 76
Query: 449 KNEIETSNSNATIGANVKAFV-------------------REMKTFSDPTLSALLHWEMR 489
             E E  N+      N+  F+                    EM +  D      L     
Sbjct: 77  FRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC 136
Query: 490 FNIIIGIARGLLYLHQD-----SRLRIIHRDLKTSNILLDQEMNPKISDFGLAL 538
             I++ IA GL +LH +      +  I HRDLK+ NIL+ +     I+D GLA+
Sbjct: 137 LRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAV 190

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 78/168 (46%), Gaps = 23/168 (13%)
Query: 402 AATDNFSEANKLGKGGFGPVYKAKFPGG----QQIAVKRLSSASGQGLEEFKNEIETSNS 457
           A    F     LG+G FG V+  K   G    Q  A+K L  A+ +  +  + ++E    
Sbjct: 21  ADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKME---R 77
Query: 458 NATIGANVKAFVREMKTF-SDPTLSALLHWEMRFNIIIGIARGLLYLHQDSR-------- 508
           +  +  N    V+    F ++  L  +L +    ++   +++ +++  +D +        
Sbjct: 78  DILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELAL 137
Query: 509 -------LRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASS 549
                  L II+RDLK  NILLD+E + K++DFGL+ + +D +  A S
Sbjct: 138 ALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS 185

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 27/153 (17%)
Query: 405 DNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLS-SASGQG-----------LEEFKNE- 451
           + +    K+G+G +G VYKA+   G+  A+K++      +G           L+E K+  
Sbjct: 2   EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 452 -------IETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLH 504
                  I T      +  ++   ++++    +  L ++        ++ GIA    Y H
Sbjct: 62  IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIA----YCH 117
Query: 505 QDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
                R++HRDLK  N+L+++E   KI+DFGLA
Sbjct: 118 DR---RVLHRDLKPQNLLINREGELKIADFGLA 147

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 78/168 (46%), Gaps = 23/168 (13%)
Query: 402 AATDNFSEANKLGKGGFGPVYKAKFPGG----QQIAVKRLSSASGQGLEEFKNEIETSNS 457
           A    F     LG+G FG V+  K   G    Q  A+K L  A+ +  +  + ++E    
Sbjct: 22  ADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKME---R 78
Query: 458 NATIGANVKAFVREMKTF-SDPTLSALLHWEMRFNIIIGIARGLLYLHQDSR-------- 508
           +  +  N    V+    F ++  L  +L +    ++   +++ +++  +D +        
Sbjct: 79  DILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELAL 138
Query: 509 -------LRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASS 549
                  L II+RDLK  NILLD+E + K++DFGL+ + +D +  A S
Sbjct: 139 ALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS 186

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 24/47 (51%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD 542
           I  G+ Y H   R  ++HRDLK  N+LLD  MN KI+DFGL+  M D
Sbjct: 125 ILSGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 168

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score = 45.8 bits (107), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 27/153 (17%)
Query: 405 DNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLS-SASGQG-----------LEEFKNE- 451
           + +    K+G+G +G VYKA+   G+  A+K++      +G           L+E K+  
Sbjct: 2   EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 452 -------IETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLH 504
                  I T      +  ++   ++++    +  L ++        ++ GIA    Y H
Sbjct: 62  IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIA----YCH 117
Query: 505 QDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
                R++HRDLK  N+L+++E   KI+DFGLA
Sbjct: 118 DR---RVLHRDLKPQNLLINREGELKIADFGLA 147

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score = 45.8 bits (107), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 27/153 (17%)
Query: 405 DNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLS-SASGQG-----------LEEFKNE- 451
           + +    K+G+G +G VYKA+   G+  A+K++      +G           L+E K+  
Sbjct: 2   EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 452 -------IETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLH 504
                  I T      +  ++   ++++    +  L ++        ++ GIA    Y H
Sbjct: 62  IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIA----YCH 117
Query: 505 QDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
                R++HRDLK  N+L+++E   KI+DFGLA
Sbjct: 118 DR---RVLHRDLKPQNLLINREGELKIADFGLA 147

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score = 45.8 bits (107), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 23/45 (51%), Positives = 32/45 (71%), Gaps = 3/45 (6%)
Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM 540
           I  GL +LHQ +   II+RDLK  N+LLD + N +ISD GLA+++
Sbjct: 298 IVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVEL 339

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score = 45.8 bits (107), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 23/45 (51%), Positives = 32/45 (71%), Gaps = 3/45 (6%)
Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM 540
           I  GL +LHQ +   II+RDLK  N+LLD + N +ISD GLA+++
Sbjct: 298 IVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVEL 339

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 45.8 bits (107), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 69/161 (42%), Gaps = 24/161 (14%)
Query: 398 ESILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSA------SGQGLEEFKN 450
           ++I    + +   + +G G +G V  A     G ++AVK+LS        + +   E + 
Sbjct: 15  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 451 EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI--------------IIGI 496
                + N     +V    R ++ F+D  L   L      NI              I  I
Sbjct: 75  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            RGL Y+H      IIHRDLK SN+ ++++   KI D+GLA
Sbjct: 135 LRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDYGLA 172

>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 44/71 (61%), Gaps = 9/71 (12%)
Query: 477 DPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGL 536
           +PT+  L+ + ++      +A+G+ YL   +  + +HRDL   N +LD++   K++DFGL
Sbjct: 121 NPTVKDLIGFGLQ------VAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGL 171
Query: 537 ALDMMDQKLHA 547
           A DM D++ ++
Sbjct: 172 ARDMYDKEYYS 182

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 23/45 (51%), Positives = 32/45 (71%), Gaps = 3/45 (6%)
Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM 540
           I  GL +LHQ +   II+RDLK  N+LLD + N +ISD GLA+++
Sbjct: 298 IVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVEL 339

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 23/45 (51%), Positives = 32/45 (71%), Gaps = 3/45 (6%)
Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM 540
           I  GL +LHQ +   II+RDLK  N+LLD + N +ISD GLA+++
Sbjct: 298 IVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVEL 339

>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 45/198 (22%)
Query: 377 VDSDQFKEEEKQGIDLPFIDFESILAATDNFSEANKLGKGGFGPVYKAKFPG--GQQI-- 432
           +D      E  Q +    I   S++    +F+E   +G+G FG VY        G++I  
Sbjct: 8   IDLSALNPELVQAVQHVVIGPSSLIV---HFNEV--IGRGHFGCVYHGTLLDNDGKKIHC 62
Query: 433 AVKRLSSASGQG-LEEFKNE------IETSNSNATIG------------------ANVKA 467
           AVK L+  +  G + +F  E          N  + +G                   +++ 
Sbjct: 63  AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 122
Query: 468 FVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEM 527
           F+R      +PT+  L+ + ++      +A+G+ +L   +  + +HRDL   N +LD++ 
Sbjct: 123 FIRNET--HNPTVKDLIGFGLQ------VAKGMKFL---ASKKFVHRDLAARNCMLDEKF 171
Query: 528 NPKISDFGLALDMMDQKL 545
             K++DFGLA DM+D++ 
Sbjct: 172 TVKVADFGLARDMLDKEF 189

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 21/40 (52%), Positives = 29/40 (72%), Gaps = 3/40 (7%)
Query: 498 RGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           +G+ YLH +   R+IHRDLK  N+ L+ +M+ KI DFGLA
Sbjct: 153 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLA 189

>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2- Aminopyridine Inhibitor Length = 301

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 64/150 (42%), Gaps = 28/150 (18%)
Query: 413 LGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVKAFV--- 469
           +GKG +G V++  + G + +AVK  SS   +    +  E E  N+      N+  F+   
Sbjct: 16  VGKGRYGEVWRGSWQG-ENVAVKIFSSRDEKS---WFRETELYNTVMLRHENILGFIASD 71
Query: 470 ----------------REMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQD-----SR 508
                            EM +  D      L       I++ IA GL +LH +      +
Sbjct: 72  MTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGK 131
Query: 509 LRIIHRDLKTSNILLDQEMNPKISDFGLAL 538
             I HRDLK+ NIL+ +     I+D GLA+
Sbjct: 132 PAIAHRDLKSKNILVKKNGQCCIADLGLAV 161

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 35/50 (70%), Gaps = 3/50 (6%)
Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKL 545
           I +GL YLH + +   IHRD+K +N+LL ++ + K++DFG+A  + D ++
Sbjct: 129 ILKGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI 175

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 21/40 (52%), Positives = 29/40 (72%), Gaps = 3/40 (7%)
Query: 498 RGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           +G+ YLH +   R+IHRDLK  N+ L+ +M+ KI DFGLA
Sbjct: 153 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLA 189

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 21/40 (52%), Positives = 29/40 (72%), Gaps = 3/40 (7%)
Query: 498 RGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           +G+ YLH +   R+IHRDLK  N+ L+ +M+ KI DFGLA
Sbjct: 153 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLA 189

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 69/157 (43%), Gaps = 26/157 (16%)
Query: 410 ANKLGKGGFGPVYKAKFPGGQQIAVKRL--SSASGQGLEEFKNEIETSNSNATIGANVKA 467
             KLG G FG V+   +    ++AVK L   + S Q   E  N ++T   +  +   + A
Sbjct: 17  VKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLV--RLYA 74
Query: 468 FVREMKTF-----------------SDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLR 510
            V + +                   SD     LL   + F+    IA G+ Y+    R  
Sbjct: 75  VVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSA--QIAEGMAYIE---RKN 129
Query: 511 IIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHA 547
            IHRDL+ +N+L+ + +  KI+DFGLA  + D +  A
Sbjct: 130 YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTA 166

>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 81/172 (47%), Gaps = 30/172 (17%)
Query: 400 ILAATDNFSEANKLGKGGFGPVYKAKF-PGGQQI----AVKRLSSA-SGQGLEEFKNE-- 451
           IL  T+ F +   LG G FG VYK  + P G+++    A+K L  A S +  +E  +E  
Sbjct: 8   ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 66
Query: 452 ----IETSNSNATIGANVKAFVREMKTFSDPTLSALLHW----------EMRFNIIIGIA 497
               ++  +    +G  + + V+ +          LL +          +   N  + IA
Sbjct: 67  VMASVDNPHVCRLLGICLTSTVQLITQLM--PFGCLLDYVREHKDNIGSQYLLNWCVQIA 124
Query: 498 RGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA--LDMMDQKLHA 547
            G+ YL +D RL  +HRDL   N+L+    + KI+DFGLA  L   +++ HA
Sbjct: 125 EGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 173

>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With The Imidazo[1,2-B]pyridazine Inhibitor K00135 Length = 301

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 64/150 (42%), Gaps = 28/150 (18%)
Query: 413 LGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVKAFV--- 469
           +GKG +G V++  + G + +AVK  SS   +    +  E E  N+      N+  F+   
Sbjct: 16  VGKGRYGEVWRGSWQG-ENVAVKIFSSRDEKS---WFRETELYNTVMLRHENILGFIASD 71
Query: 470 ----------------REMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQD-----SR 508
                            EM +  D      L       I++ IA GL +LH +      +
Sbjct: 72  MTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGK 131
Query: 509 LRIIHRDLKTSNILLDQEMNPKISDFGLAL 538
             I HRDLK+ NIL+ +     I+D GLA+
Sbjct: 132 PAIAHRDLKSKNILVKKNGQCCIADLGLAV 161

>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 45/197 (22%)
Query: 377 VDSDQFKEEEKQGIDLPFIDFESILAATDNFSEANKLGKGGFGPVYKAKFPG--GQQI-- 432
           +D      E  Q +    I   S++    +F+E   +G+G FG VY        G++I  
Sbjct: 6   IDLSALNPELVQAVQHVVIGPSSLIV---HFNEV--IGRGHFGCVYHGTLLDNDGKKIHC 60
Query: 433 AVKRLSSASGQG-LEEFKNE------IETSNSNATIG------------------ANVKA 467
           AVK L+  +  G + +F  E          N  + +G                   +++ 
Sbjct: 61  AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 120
Query: 468 FVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEM 527
           F+R      +PT+  L+ + ++      +A+G+ YL   +  + +HRDL   N +LD++ 
Sbjct: 121 FIRNET--HNPTVKDLIGFGLQ------VAKGMKYL---ASKKFVHRDLAARNCMLDEKF 169
Query: 528 NPKISDFGLALDMMDQK 544
             K++DFGLA DM D++
Sbjct: 170 TVKVADFGLARDMYDKE 186

>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 71/175 (40%), Gaps = 34/175 (19%)
Query: 406 NFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQGLEE----------------- 447
           +F E   +G GGFG V+KAK    G+   +KR+   + +   E                 
Sbjct: 12  DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNG 71
Query: 448 ----FKNEIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWE--------MRFNIIIG 495
               F  + ETS+ N++  +  K    +M+     TL   +           +   +   
Sbjct: 72  CWDGFDYDPETSSKNSS-RSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQ 130
Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSK 550
           I +G+ Y+H     ++I+RDLK SNI L      KI DFGL   + +      SK
Sbjct: 131 ITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSK 182

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 508 RLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD 542
           R +I+HRDLK  N+LLD+ +N KI+DFGL+  M D
Sbjct: 130 RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164

>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 63/165 (38%), Gaps = 31/165 (18%)
Query: 401 LAATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQGLEEFKNEIETSNSNA 459
           L    +F E   LG+G FG V KA+     +  A+K++     +        +  ++ N 
Sbjct: 2   LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNH 61
Query: 460 TIGANVKAFVREMKTFSDP--------------------TLSALLHWE-------MRFNI 492
                  A   E + F  P                    TL  L+H E         + +
Sbjct: 62  QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRL 121
Query: 493 IIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
              I   L Y+H      IIHRDLK  NI +D+  N KI DFGLA
Sbjct: 122 FRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLA 163

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 508 RLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD 542
           R +I+HRDLK  N+LLD+ +N KI+DFGL+  M D
Sbjct: 131 RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 165

>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 63/165 (38%), Gaps = 31/165 (18%)
Query: 401 LAATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQGLEEFKNEIETSNSNA 459
           L    +F E   LG+G FG V KA+     +  A+K++     +        +  ++ N 
Sbjct: 2   LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNH 61
Query: 460 TIGANVKAFVREMKTFSDP--------------------TLSALLHWE-------MRFNI 492
                  A   E + F  P                    TL  L+H E         + +
Sbjct: 62  QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRL 121
Query: 493 IIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
              I   L Y+H      IIHRDLK  NI +D+  N KI DFGLA
Sbjct: 122 FRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLA 163

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 21/40 (52%), Positives = 29/40 (72%), Gaps = 3/40 (7%)
Query: 498 RGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           +G+ YLH +   R+IHRDLK  N+ L+ +M+ KI DFGLA
Sbjct: 137 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLA 173

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 74/152 (48%), Gaps = 25/152 (16%)
Query: 407 FSEANKLGKGGFGPVYKAKFPGGQQI-AVKRLS----SASGQG-----LEEFKNEIETSN 456
           + + + LG+G F  VYKA+     QI A+K++     S +  G     L E K   E S+
Sbjct: 12  YEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSH 71
Query: 457 SNATIG--------ANVKAFVREMKTFSDPTL---SALLHWEMRFNIIIGIARGLLYLHQ 505
            N  IG        +N+      M+T  +  +   S +L        ++   +GL YLHQ
Sbjct: 72  PN-IIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQ 130
Query: 506 DSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
                I+HRDLK +N+LLD+    K++DFGLA
Sbjct: 131 HW---ILHRDLKPNNLLLDENGVLKLADFGLA 159

>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 72/178 (40%), Gaps = 48/178 (26%)
Query: 405 DNFSEANKLGKGGFGPVYKAKFPG------GQQIAVKRL-SSASGQGLEEFKNEI----E 453
           +N      +G+G FG V++A+ PG         +AVK L   AS     +F+ E     E
Sbjct: 47  NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 454 TSNSNATIGANVKAFVREM----------------KTFSDPTLSALLHWEM--------- 488
             N N      V A  + M                ++ S  T+ +L H ++         
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 166
Query: 489 ---------RFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
                    +  I   +A G+ YL   S  + +HRDL T N L+ + M  KI+DFGL+
Sbjct: 167 GPPPLSCAEQLCIARQVAAGMAYL---SERKFVHRDLATRNCLVGENMVVKIADFGLS 221

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 508 RLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD 542
           R +I+HRDLK  N+LLD+ +N KI+DFGL+  M D
Sbjct: 121 RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 155

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 508 RLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD 542
           R +I+HRDLK  N+LLD+ +N KI+DFGL+  M D
Sbjct: 125 RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 159

>pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 68/160 (42%), Gaps = 38/160 (23%)
Query: 413 LGKGGFGPVYKAKFPGG---QQIAVKRLSS-ASGQGLEEFKNEIET-------SNSNATI 461
           +G+G FG V KA+          A+KR+   AS     +F  E+E         N    +
Sbjct: 33  IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 92
Query: 462 GA-----------------NVKAFVREMKTF-SDPTLS------ALLHWEMRFNIIIGIA 497
           GA                 N+  F+R+ +   +DP  +      + L  +   +    +A
Sbjct: 93  GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 152
Query: 498 RGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           RG+ YL Q    + IHRDL   NIL+ +    KI+DFGL+
Sbjct: 153 RGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLS 189

>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 68/160 (42%), Gaps = 38/160 (23%)
Query: 413 LGKGGFGPVYKAKFPGG---QQIAVKRLSS-ASGQGLEEFKNEIET-------SNSNATI 461
           +G+G FG V KA+          A+KR+   AS     +F  E+E         N    +
Sbjct: 23  IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 82
Query: 462 GA-----------------NVKAFVREMKTF-SDPTLS------ALLHWEMRFNIIIGIA 497
           GA                 N+  F+R+ +   +DP  +      + L  +   +    +A
Sbjct: 83  GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 142
Query: 498 RGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           RG+ YL Q    + IHRDL   NIL+ +    KI+DFGL+
Sbjct: 143 RGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLS 179

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 68/160 (42%), Gaps = 24/160 (15%)
Query: 398 ESILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSA------SGQGLEEFKN 450
           ++I    + +   + +G G +G V  A     G ++AVK+LS        + +   E + 
Sbjct: 15  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 451 EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI--------------IIGI 496
                + N     +V    R ++ F+D  L   L      NI              I  I
Sbjct: 75  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQI 134
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGL 536
            RGL Y+H      IIHRDLK SN+ ++++   KI DFGL
Sbjct: 135 LRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGL 171

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 4/56 (7%)
Query: 482 ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           AL   E R+  +  I  G  YLH++   R+IHRDLK  N+ L++++  KI DFGLA
Sbjct: 117 ALTEPEARY-YLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA 168

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 4/56 (7%)
Query: 482 ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           AL   E R+  +  I  G  YLH++   R+IHRDLK  N+ L++++  KI DFGLA
Sbjct: 137 ALTEPEARY-YLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA 188

>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 68/161 (42%), Gaps = 24/161 (14%)
Query: 398 ESILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSA------SGQGLEEFKN 450
           ++I    + +   + +G G +G V  A     G ++AVK+LS        + +   E + 
Sbjct: 15  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 451 EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI--------------IIGI 496
                + N     +V    R ++ F+D  L   L      NI              I  I
Sbjct: 75  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            RGL Y+H      IIHRDLK SN+ ++++   KI DF LA
Sbjct: 135 LRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFYLA 172

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 4/56 (7%)
Query: 482 ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           AL   E R+  +  I  G  YLH++   R+IHRDLK  N+ L++++  KI DFGLA
Sbjct: 135 ALTEPEARY-YLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA 186

>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 71/162 (43%), Gaps = 23/162 (14%)
Query: 402 AATDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQGLEEFK------NEIET 454
           A  ++     ++G G  G V+K +F   G  IAVK++  +  +  EE K      + +  
Sbjct: 22  AEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNK--EENKRILMDLDVVLK 79
Query: 455 SNSNATIGANVKAFVREMKTFSDPTLSALLHWEMR------------FNIIIGIARGLLY 502
           S+    I      F+     F    L      +++              + + I + L Y
Sbjct: 80  SHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYY 139
Query: 503 LHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQK 544
           L +  +  +IHRD+K SNILLD+    K+ DFG++  ++D K
Sbjct: 140 LKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK 179

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/42 (50%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           I  G  YLH++   R+IHRDLK  N+ L++++  KI DFGLA
Sbjct: 126 IVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA 164

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 4/56 (7%)
Query: 482 ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           AL   E R+  +  I  G  YLH++   R+IHRDLK  N+ L++++  KI DFGLA
Sbjct: 113 ALTEPEARY-YLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA 164

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 68/157 (43%), Gaps = 25/157 (15%)
Query: 405 DNFSEANKLGKGGFGPVYKAKFPG-GQQIAVKRLSS-------ASGQGLEEFKNEIETSN 456
           + F +   LGKGGFG V   +    G+  A K+L              L E K  +E  N
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNE-KQILEKVN 242
Query: 457 SNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNII------IGIARGLLY-------L 503
           S   +     A+  E K      L+ +   +++F+I          AR + Y       L
Sbjct: 243 SRFVVSL---AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGL 299
Query: 504 HQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM 540
               R RI++RDLK  NILLD   + +ISD GLA+ +
Sbjct: 300 EDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHV 336

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/42 (50%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           I  G  YLH++   R+IHRDLK  N+ L++++  KI DFGLA
Sbjct: 124 IVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA 162

>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 68/162 (41%), Gaps = 40/162 (24%)
Query: 412 KLGKGGFGPVYKAKF----PG--GQQIAVKRLSS-ASGQGLEEFKNE------IETSNSN 458
           +LG+  FG VYK       PG   Q +A+K L   A G   EEF++E      ++  N  
Sbjct: 33  ELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVV 92
Query: 459 ATIGANVKAFVREM------------------------KTFSDPTLSALLHWEMRFNIII 494
             +G   K     M                         T  D T+ + L      +++ 
Sbjct: 93  CLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVA 152
Query: 495 GIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGL 536
            IA G+ YL   S   ++H+DL T N+L+  ++N KISD GL
Sbjct: 153 QIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGL 191

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 13/72 (18%)
Query: 496 IARGLL----YLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA--LDMMDQKLHASS 549
           I R LL     LH   +L I+HRDLK  NILLD +MN K++DFG +  LD  ++      
Sbjct: 116 IMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCG 172
Query: 550 KPN----EILKC 557
            P+    EI++C
Sbjct: 173 TPSYLAPEIIEC 184

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 13/72 (18%)
Query: 496 IARGLL----YLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA--LDMMDQKLHASS 549
           I R LL     LH   +L I+HRDLK  NILLD +MN K++DFG +  LD  ++      
Sbjct: 129 IMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCG 185
Query: 550 KPN----EILKC 557
            P+    EI++C
Sbjct: 186 TPSYLAPEIIEC 197

>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 88/198 (44%), Gaps = 45/198 (22%)
Query: 377 VDSDQFKEEEKQGIDLPFIDFESILAATDNFSEANKLGKGGFGPVYKAKFPG--GQQI-- 432
           +D      E  Q +    I   S++    +F+E   +G+G FG VY        G++I  
Sbjct: 5   IDLSALNPELVQAVQHVVIGPSSLIV---HFNEV--IGRGHFGCVYHGTLLDNDGKKIHC 59
Query: 433 AVKRLSSASGQG-LEEFKNE------IETSNSNATIG------------------ANVKA 467
           AVK L+  +  G + +F  E          N  + +G                   +++ 
Sbjct: 60  AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 119
Query: 468 FVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEM 527
           F+R      +PT+  L+ + ++      +A+G+ +L   +  + +HRDL   N +LD++ 
Sbjct: 120 FIRNET--HNPTVKDLIGFGLQ------VAKGMKFL---ASKKFVHRDLAARNCMLDEKF 168
Query: 528 NPKISDFGLALDMMDQKL 545
             K++DFGLA DM D++ 
Sbjct: 169 TVKVADFGLARDMYDKEF 186

>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2 (Erbb2). Length = 338

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 41/67 (61%), Gaps = 11/67 (16%)
Query: 483 LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA--LDM 540
           LL+W M+      IA+G+ YL     +R++HRDL   N+L+    + KI+DFGLA  LD+
Sbjct: 121 LLNWCMQ------IAKGMSYLED---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDI 171
Query: 541 MDQKLHA 547
            + + HA
Sbjct: 172 DETEYHA 178

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/42 (50%), Positives = 28/42 (66%)
Query: 508 RLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASS 549
           R  ++HRDLK  N+LLD  MN KI+DFGL+  M D +   +S
Sbjct: 129 RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS 170

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 79/182 (43%), Gaps = 30/182 (16%)
Query: 410 ANKLGKGGFGPVYKAKFPGGQQIAVKRLSS---------ASGQGLEEFKNE-------IE 453
             +LG G FG V+   + G  ++AVK L           A    +++ +++       + 
Sbjct: 24  VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 454 TSNSNATIGANVK--AFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRI 511
           T      I   ++  + V  +KT S   L+         ++   IA G+ ++ + +    
Sbjct: 84  TQEPIYIITEYMENGSLVDFLKTPSGIKLTI----NKLLDMAAQIAEGMAFIEERN---Y 136
Query: 512 IHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSKPNEILK-----CINVGLLCVQ 566
           IHRDL+ +NIL+   ++ KI+DFGLA  + D +  A       +K      IN G   ++
Sbjct: 137 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 196
Query: 567 ED 568
            D
Sbjct: 197 SD 198

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 79/182 (43%), Gaps = 30/182 (16%)
Query: 410 ANKLGKGGFGPVYKAKFPGGQQIAVKRLSS---------ASGQGLEEFKNE-------IE 453
             +LG G FG V+   + G  ++AVK L           A    +++ +++       + 
Sbjct: 23  VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 82
Query: 454 TSNSNATIGANVK--AFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRI 511
           T      I   ++  + V  +KT S   L+         ++   IA G+ ++ + +    
Sbjct: 83  TQEPIYIITEYMENGSLVDFLKTPSGIKLTI----NKLLDMAAQIAEGMAFIEERN---Y 135
Query: 512 IHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSKPNEILK-----CINVGLLCVQ 566
           IHRDL+ +NIL+   ++ KI+DFGLA  + D +  A       +K      IN G   ++
Sbjct: 136 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 195
Query: 567 ED 568
            D
Sbjct: 196 SD 197

>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 88/198 (44%), Gaps = 45/198 (22%)
Query: 377 VDSDQFKEEEKQGIDLPFIDFESILAATDNFSEANKLGKGGFGPVYKAKFPG--GQQI-- 432
           +D      E  Q +    I   S++    +F+E   +G+G FG VY        G++I  
Sbjct: 7   IDLSALNPELVQAVQHVVIGPSSLIV---HFNEV--IGRGHFGCVYHGTLLDNDGKKIHC 61
Query: 433 AVKRLSSASGQG-LEEFKNE------IETSNSNATIG------------------ANVKA 467
           AVK L+  +  G + +F  E          N  + +G                   +++ 
Sbjct: 62  AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 121
Query: 468 FVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEM 527
           F+R      +PT+  L+ + ++      +A+G+ +L   +  + +HRDL   N +LD++ 
Sbjct: 122 FIRNET--HNPTVKDLIGFGLQ------VAKGMKFL---ASKKFVHRDLAARNCMLDEKF 170
Query: 528 NPKISDFGLALDMMDQKL 545
             K++DFGLA DM D++ 
Sbjct: 171 TVKVADFGLARDMYDKEF 188

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 491 NIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKL 545
            I+  I +GL YLH + +   IHRD+K +N+LL +    K++DFG+A  + D ++
Sbjct: 108 TILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI 159

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/39 (56%), Positives = 28/39 (71%), Gaps = 3/39 (7%)
Query: 499 GLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           G++YLH    + I HRD+K  N+LLD+  N KISDFGLA
Sbjct: 117 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLA 152

>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 88/198 (44%), Gaps = 45/198 (22%)
Query: 377 VDSDQFKEEEKQGIDLPFIDFESILAATDNFSEANKLGKGGFGPVYKAKFPG--GQQI-- 432
           +D      E  Q +    I   S++    +F+E   +G+G FG VY        G++I  
Sbjct: 12  IDLSALNPELVQAVQHVVIGPSSLIV---HFNEV--IGRGHFGCVYHGTLLDNDGKKIHC 66
Query: 433 AVKRLSSASGQG-LEEFKNE------IETSNSNATIG------------------ANVKA 467
           AVK L+  +  G + +F  E          N  + +G                   +++ 
Sbjct: 67  AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 126
Query: 468 FVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEM 527
           F+R      +PT+  L+ + ++      +A+G+ +L   +  + +HRDL   N +LD++ 
Sbjct: 127 FIRNET--HNPTVKDLIGFGLQ------VAKGMKFL---ASKKFVHRDLAARNCMLDEKF 175
Query: 528 NPKISDFGLALDMMDQKL 545
             K++DFGLA DM D++ 
Sbjct: 176 TVKVADFGLARDMYDKEF 193

>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 68/162 (41%), Gaps = 40/162 (24%)
Query: 412 KLGKGGFGPVYKAKF----PG--GQQIAVKRLSS-ASGQGLEEFKNE------IETSNSN 458
           +LG+  FG VYK       PG   Q +A+K L   A G   EEF++E      ++  N  
Sbjct: 16  ELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVV 75
Query: 459 ATIGANVKAFVREM------------------------KTFSDPTLSALLHWEMRFNIII 494
             +G   K     M                         T  D T+ + L      +++ 
Sbjct: 76  CLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVA 135
Query: 495 GIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGL 536
            IA G+ YL   S   ++H+DL T N+L+  ++N KISD GL
Sbjct: 136 QIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGL 174

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 491 NIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKL 545
            I+  I +GL YLH + +   IHRD+K +N+LL +    K++DFG+A  + D ++
Sbjct: 123 TILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI 174

>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And Kinase Domains Length = 361

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 81/172 (47%), Gaps = 30/172 (17%)
Query: 400 ILAATDNFSEANKLGKGGFGPVYKAKF-PGGQQI----AVKRLSSA-SGQGLEEFKNE-- 451
           IL  T+ F +   LG G FG VYK  + P G+++    A+  L  A S +  +E  +E  
Sbjct: 45  ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAY 103
Query: 452 ----IETSNSNATIGANVKAFVREMKTFSDPTLSALLHW----------EMRFNIIIGIA 497
               ++  +    +G  + + V+ +          LL +          +   N  + IA
Sbjct: 104 VMASVDNPHVCRLLGICLTSTVQLITQLM--PFGCLLDYVREHKDNIGSQYLLNWCVQIA 161
Query: 498 RGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA--LDMMDQKLHA 547
           +G+ YL +D RL  +HRDL   N+L+    + KI+DFGLA  L   +++ HA
Sbjct: 162 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 210

>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 88/198 (44%), Gaps = 45/198 (22%)
Query: 377 VDSDQFKEEEKQGIDLPFIDFESILAATDNFSEANKLGKGGFGPVYKAKFPG--GQQI-- 432
           +D      E  Q +    I   S++    +F+E   +G+G FG VY        G++I  
Sbjct: 8   IDLSALNPELVQAVQHVVIGPSSLIV---HFNEV--IGRGHFGCVYHGTLLDNDGKKIHC 62
Query: 433 AVKRLSSASGQG-LEEFKNE------IETSNSNATIG------------------ANVKA 467
           AVK L+  +  G + +F  E          N  + +G                   +++ 
Sbjct: 63  AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 122
Query: 468 FVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEM 527
           F+R      +PT+  L+ + ++      +A+G+ +L   +  + +HRDL   N +LD++ 
Sbjct: 123 FIRNET--HNPTVKDLIGFGLQ------VAKGMKFL---ASKKFVHRDLAARNCMLDEKF 171
Query: 528 NPKISDFGLALDMMDQKL 545
             K++DFGLA DM D++ 
Sbjct: 172 TVKVADFGLARDMYDKEF 189

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 491 NIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKL 545
            I+  I +GL YLH + +   IHRD+K +N+LL +    K++DFG+A  + D ++
Sbjct: 108 TILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI 159

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 68/158 (43%), Gaps = 39/158 (24%)
Query: 407 FSEANKLGKGGFGPVYKAK-FPGGQQIAVKRLSSASGQGLEEFKNEIE-------TSNSN 458
           FS+  ++G G FG VY A+     + +A+K++S +  Q  E++++ I+         + N
Sbjct: 17  FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 459 AT-------------------IGANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARG 499
                                +G+         K   +  ++A+ H         G  +G
Sbjct: 77  TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTH---------GALQG 127
Query: 500 LLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           L YLH  +   +IHRD+K  NILL +    K+ DFG A
Sbjct: 128 LAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSA 162

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/35 (57%), Positives = 25/35 (71%)
Query: 508 RLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD 542
           R  ++HRDLK  N+LLD  MN KI+DFGL+  M D
Sbjct: 129 RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 163

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/39 (56%), Positives = 28/39 (71%), Gaps = 3/39 (7%)
Query: 499 GLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           G++YLH    + I HRD+K  N+LLD+  N KISDFGLA
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLA 151

>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 81/172 (47%), Gaps = 30/172 (17%)
Query: 400 ILAATDNFSEANKLGKGGFGPVYKAKF-PGGQQI----AVKRLSSA-SGQGLEEFKNE-- 451
           IL  T+ F +   L  G FG VYK  + P G+++    A+K L  A S +  +E  +E  
Sbjct: 11  ILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 452 ----IETSNSNATIGANVKAFVREMKTFSDPTLSALLHW----------EMRFNIIIGIA 497
               ++  +    +G  + + V+ +          LL +          +   N  + IA
Sbjct: 70  VMASVDNPHVCRLLGICLTSTVQLITQLM--PFGCLLDYVREHKDNIGSQYLLNWCVQIA 127
Query: 498 RGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA--LDMMDQKLHA 547
           +G+ YL +D RL  +HRDL   N+L+    + KI+DFGLA  L   +++ HA
Sbjct: 128 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176

>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 88/198 (44%), Gaps = 45/198 (22%)
Query: 377 VDSDQFKEEEKQGIDLPFIDFESILAATDNFSEANKLGKGGFGPVYKAKFPG--GQQI-- 432
           +D      E  Q +    I   S++    +F+E   +G+G FG VY        G++I  
Sbjct: 7   IDLSALNPELVQAVQHVVIGPSSLIV---HFNEV--IGRGHFGCVYHGTLLDNDGKKIHC 61
Query: 433 AVKRLSSASGQG-LEEFKNE------IETSNSNATIG------------------ANVKA 467
           AVK L+  +  G + +F  E          N  + +G                   +++ 
Sbjct: 62  AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 121
Query: 468 FVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEM 527
           F+R      +PT+  L+ + ++      +A+G+ +L   +  + +HRDL   N +LD++ 
Sbjct: 122 FIRNET--HNPTVKDLIGFGLQ------VAKGMKFL---ASKKFVHRDLAARNCMLDEKF 170
Query: 528 NPKISDFGLALDMMDQKL 545
             K++DFGLA DM D++ 
Sbjct: 171 TVKVADFGLARDMYDKEF 188

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 69/166 (41%), Gaps = 54/166 (32%)
Query: 406 NFSEANKLGKGGFGPVYKAK-FPGGQQIAVK-----RLSSASGQGLEEFKNEIETSNSNA 459
           N+     +GKG F  V  A+    G+++AVK     +L+S+S Q L  F+          
Sbjct: 15  NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKL--FRE--------- 63
Query: 460 TIGANVKAFVREMKTFSDPTLSAL---LHWEMRFNIIIGIARG---LLYLHQDSRLR--- 510
                    VR MK  + P +  L   +  E    +++  A G     YL    R++   
Sbjct: 64  ---------VRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE 114
Query: 511 -------------------IIHRDLKTSNILLDQEMNPKISDFGLA 537
                              I+HRDLK  N+LLD +MN KI+DFG +
Sbjct: 115 ARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 160

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 82/184 (44%), Gaps = 34/184 (18%)
Query: 410 ANKLGKGGFGPVYKAKFPGGQQIAVKRLSS---------ASGQGLEEFKNE-------IE 453
             +LG G FG V+   + G  ++AVK L           A    +++ +++       + 
Sbjct: 28  VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 87
Query: 454 TSNSNATIGANVK--AFVREMKTFS--DPTLSALLHWEMRFNIIIGIARGLLYLHQDSRL 509
           T      I   ++  + V  +KT S    T++ LL      ++   IA G+ ++ + +  
Sbjct: 88  TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLL------DMAAQIAEGMAFIEERN-- 139
Query: 510 RIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSKPNEILK-----CINVGLLC 564
             IHRDL+ +NIL+   ++ KI+DFGLA  + D +  A       +K      IN G   
Sbjct: 140 -YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFT 198
Query: 565 VQED 568
           ++ D
Sbjct: 199 IKSD 202

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 79/182 (43%), Gaps = 30/182 (16%)
Query: 410 ANKLGKGGFGPVYKAKFPGGQQIAVKRLSS---------ASGQGLEEFKNE-------IE 453
             +LG G FG V+   + G  ++AVK L           A    +++ +++       + 
Sbjct: 18  VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 454 TSNSNATIGANVK--AFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRI 511
           T      I   ++  + V  +KT S   L+         ++   IA G+ ++ + +    
Sbjct: 78  TQEPIYIITEYMENGSLVDFLKTPSGIKLTI----NKLLDMAAQIAEGMAFIEERN---Y 130
Query: 512 IHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSKPNEILK-----CINVGLLCVQ 566
           IHRDL+ +NIL+   ++ KI+DFGLA  + D +  A       +K      IN G   ++
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 567 ED 568
            D
Sbjct: 191 SD 192

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 68/157 (43%), Gaps = 25/157 (15%)
Query: 405 DNFSEANKLGKGGFGPVYKAKFPG-GQQIAVKRLSS-------ASGQGLEEFKNEIETSN 456
           + F +   LGKGGFG V   +    G+  A K+L              L E K  +E  N
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNE-KQILEKVN 242
Query: 457 SNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNII------IGIARGLLY-------L 503
           S   +     A+  E K      L+ +   +++F+I          AR + Y       L
Sbjct: 243 SRFVVSL---AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGL 299
Query: 504 HQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM 540
               R RI++RDLK  NILLD   + +ISD GLA+ +
Sbjct: 300 EDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHV 336

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 24/151 (15%)
Query: 407 FSEANKLGKGGFGPVYKAKFPGGQ-QIAVKRLSSASGQG-----LEEFKNEIETSNSNAT 460
           ++  + +G+G +G V  A     + ++A+K++S    Q      L E K  +   + N  
Sbjct: 25  YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN-I 83
Query: 461 IGAN--VKA-FVREMKT------FSDPTLSALLHWEMRFN-----IIIGIARGLLYLHQD 506
           IG N  ++A  + +MK         +  L  LL  +   N      +  I RGL Y+H  
Sbjct: 84  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 143
Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           +   ++HRDLK SN+LL+   + KI DFGLA
Sbjct: 144 N---VLHRDLKPSNLLLNTTXDLKICDFGLA 171

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 491 NIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKL 545
            I+  I +GL YLH + +   IHRD+K +N+LL +    K++DFG+A  + D ++
Sbjct: 128 TILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI 179

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 69/166 (41%), Gaps = 54/166 (32%)
Query: 406 NFSEANKLGKGGFGPVYKAK-FPGGQQIAVK-----RLSSASGQGLEEFKNEIETSNSNA 459
           N+     +GKG F  V  A+    G+++AVK     +L+S+S Q L  F+          
Sbjct: 15  NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKL--FRE--------- 63
Query: 460 TIGANVKAFVREMKTFSDPTLSAL---LHWEMRFNIIIGIARG---LLYLHQDSRLR--- 510
                    VR MK  + P +  L   +  E    +++  A G     YL    R++   
Sbjct: 64  ---------VRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE 114
Query: 511 -------------------IIHRDLKTSNILLDQEMNPKISDFGLA 537
                              I+HRDLK  N+LLD +MN KI+DFG +
Sbjct: 115 ARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 160

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 82/184 (44%), Gaps = 34/184 (18%)
Query: 410 ANKLGKGGFGPVYKAKFPGGQQIAVKRLSS---------ASGQGLEEFKNE-------IE 453
             +LG G FG V+   + G  ++AVK L           A    +++ +++       + 
Sbjct: 26  VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 85
Query: 454 TSNSNATIGANVK--AFVREMKTFS--DPTLSALLHWEMRFNIIIGIARGLLYLHQDSRL 509
           T      I   ++  + V  +KT S    T++ LL      ++   IA G+ ++ + +  
Sbjct: 86  TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLL------DMAAQIAEGMAFIEERN-- 137
Query: 510 RIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSKPNEILK-----CINVGLLC 564
             IHRDL+ +NIL+   ++ KI+DFGLA  + D +  A       +K      IN G   
Sbjct: 138 -YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFT 196
Query: 565 VQED 568
           ++ D
Sbjct: 197 IKSD 200

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 508 RLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD 542
           R +I+HRDLK  N+LLD  +N KI+DFGL+  M D
Sbjct: 126 RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTD 160

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 66/161 (40%), Gaps = 44/161 (27%)
Query: 406 NFSEANKLGKGGFGPVYKAK-FPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGAN 464
           N+     +GKG F  V  A+    G+++AVK                I+ +  N++    
Sbjct: 15  NYRLLKTIGKGNFAKVKLARHILTGKEVAVKI---------------IDKTQLNSSSLQK 59
Query: 465 VKAFVREMKTFSDPTLSAL---LHWEMRFNIIIGIARG---LLYLHQDSRLR-------- 510
           +   VR MK  + P +  L   +  E    +++  A G     YL    R++        
Sbjct: 60  LFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF 119
Query: 511 --------------IIHRDLKTSNILLDQEMNPKISDFGLA 537
                         I+HRDLK  N+LLD +MN KI+DFG +
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 160

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 79/182 (43%), Gaps = 30/182 (16%)
Query: 410 ANKLGKGGFGPVYKAKFPGGQQIAVKRLSS---------ASGQGLEEFKNE-------IE 453
             +LG G FG V+   + G  ++AVK L           A    +++ +++       + 
Sbjct: 19  VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 78
Query: 454 TSNSNATIGANVK--AFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRI 511
           T      I   ++  + V  +KT S   L+         ++   IA G+ ++ + +    
Sbjct: 79  TQEPIYIITEYMENGSLVDFLKTPSGIKLTI----NKLLDMAAQIAEGMAFIEERN---Y 131
Query: 512 IHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSKPNEILK-----CINVGLLCVQ 566
           IHRDL+ +NIL+   ++ KI+DFGLA  + D +  A       +K      IN G   ++
Sbjct: 132 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 191
Query: 567 ED 568
            D
Sbjct: 192 SD 193

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 79/182 (43%), Gaps = 30/182 (16%)
Query: 410 ANKLGKGGFGPVYKAKFPGGQQIAVKRLSS---------ASGQGLEEFKNE-------IE 453
             +LG G FG V+   + G  ++AVK L           A    +++ +++       + 
Sbjct: 20  VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 79
Query: 454 TSNSNATIGANVK--AFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRI 511
           T      I   ++  + V  +KT S   L+         ++   IA G+ ++ + +    
Sbjct: 80  TQEPIYIITEYMENGSLVDFLKTPSGIKLTI----NKLLDMAAQIAEGMAFIEERN---Y 132
Query: 512 IHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSKPNEILK-----CINVGLLCVQ 566
           IHRDL+ +NIL+   ++ KI+DFGLA  + D +  A       +K      IN G   ++
Sbjct: 133 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 192
Query: 567 ED 568
            D
Sbjct: 193 SD 194

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/39 (56%), Positives = 28/39 (71%), Gaps = 3/39 (7%)
Query: 499 GLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           G++YLH    + I HRD+K  N+LLD+  N KISDFGLA
Sbjct: 117 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLA 152

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 13/72 (18%)
Query: 496 IARGLL----YLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA--LDMMDQKLHASS 549
           I R LL     LH   +L I+HRDLK  NILLD +MN K++DFG +  LD  ++      
Sbjct: 129 IMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCG 185
Query: 550 KPN----EILKC 557
            P+    EI++C
Sbjct: 186 TPSYLAPEIIEC 197

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/39 (56%), Positives = 28/39 (71%), Gaps = 3/39 (7%)
Query: 499 GLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           G++YLH    + I HRD+K  N+LLD+  N KISDFGLA
Sbjct: 117 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLA 152

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/39 (56%), Positives = 28/39 (71%), Gaps = 3/39 (7%)
Query: 499 GLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           G++YLH    + I HRD+K  N+LLD+  N KISDFGLA
Sbjct: 117 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLA 152

>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/187 (24%), Positives = 71/187 (37%), Gaps = 45/187 (24%)
Query: 406 NFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQGLEEFK--------------- 449
           +F E   +G GGFG V+KAK    G+   ++R+   + +   E K               
Sbjct: 13  DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVKALAKLDHVNIVHYNG 72
Query: 450 -------------NEIETS-----NSNATIGANVKAFVREMKTFSDPTLSALLHWE---- 487
                        + +E+S     NS  +  +  K    +M+     TL   +       
Sbjct: 73  CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK 132
Query: 488 ----MRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQ 543
               +   +   I +G+ Y+H     ++IHRDLK SNI L      KI DFGL   + + 
Sbjct: 133 LDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKND 189
Query: 544 KLHASSK 550
                SK
Sbjct: 190 GKRTRSK 196

>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic Mutant L858r Egfr Kinase Domain Length = 329

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 81/172 (47%), Gaps = 30/172 (17%)
Query: 400 ILAATDNFSEANKLGKGGFGPVYKAKF-PGGQQI----AVKRLSSA-SGQGLEEFKNE-- 451
           IL  T+ F +   LG G FG VYK  + P G+++    A+K L  A S +  +E  +E  
Sbjct: 13  ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 452 ----IETSNSNATIGANVKAFVREMKTFSDPTLSALLHW----------EMRFNIIIGIA 497
               ++  +    +G  + + V+ +          LL +          +   N  + IA
Sbjct: 72  VMASVDNPHVCRLLGICLTSTVQLITQLM--PFGCLLDYVREHKDNIGSQYLLNWCVQIA 129
Query: 498 RGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA--LDMMDQKLHA 547
           +G+ YL +D RL  +HRDL   N+L+    + KI+DFG A  L   +++ HA
Sbjct: 130 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 178

>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 86/209 (41%), Gaps = 67/209 (32%)
Query: 377 VDSDQFKEEEKQGIDLPFIDFESILAATDNFSEANKLGKGGFGPVYKAKFPG--GQQI-- 432
           +D      E  Q +    I   S++    +F+E   +G+G FG VY        G++I  
Sbjct: 66  IDLSALNPELVQAVQHVVIGPSSLIV---HFNEV--IGRGHFGCVYHGTLLDNDGKKIHC 120
Query: 433 AVKRLSSASGQGLEEFKNEIETSNSNATIGANVKAFVRE---MKTFSDPTLSALL----- 484
           AVK L+  +  G                    V  F+ E   MK FS P + +LL     
Sbjct: 121 AVKSLNRITDIG-------------------EVSQFLTEGIIMKDFSHPNVLSLLGICLR 161
Query: 485 -------------HWEMRFNI-----------IIG----IARGLLYLHQDSRLRIIHRDL 516
                        H ++R  I           +IG    +A+G+ +L   +  + +HRDL
Sbjct: 162 SEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDL 218
Query: 517 KTSNILLDQEMNPKISDFGLALDMMDQKL 545
              N +LD++   K++DFGLA DM D++ 
Sbjct: 219 AARNCMLDEKFTVKVADFGLARDMYDKEF 247

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 79/182 (43%), Gaps = 30/182 (16%)
Query: 410 ANKLGKGGFGPVYKAKFPGGQQIAVKRLSS---------ASGQGLEEFKNE-------IE 453
             +LG G FG V+   + G  ++AVK L           A    +++ +++       + 
Sbjct: 18  VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 454 TSNSNATIGANVK--AFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRI 511
           T      I   ++  + V  +KT S   L+         ++   IA G+ ++ + +    
Sbjct: 78  TQEPIYIITEYMENGSLVDFLKTPSGIKLTI----NKLLDMAAQIAEGMAFIEERN---Y 130
Query: 512 IHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSKPNEILK-----CINVGLLCVQ 566
           IHRDL+ +NIL+   ++ KI+DFGLA  + D +  A       +K      IN G   ++
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 567 ED 568
            D
Sbjct: 191 SD 192

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 24/151 (15%)
Query: 407 FSEANKLGKGGFGPVYKAKFPGGQ-QIAVKRLSSASGQG-----LEEFKNEIETSNSNAT 460
           ++  + +G+G +G V  A     + ++A+K++S    Q      L E K  +   + N  
Sbjct: 25  YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN-I 83
Query: 461 IGAN--VKA-FVREMKT------FSDPTLSALLHWEMRFN-----IIIGIARGLLYLHQD 506
           IG N  ++A  + +MK         +  L  LL  +   N      +  I RGL Y+H  
Sbjct: 84  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 143
Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           +   ++HRDLK SN+LL+   + KI DFGLA
Sbjct: 144 N---VLHRDLKPSNLLLNTTXDLKIXDFGLA 171

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 82/184 (44%), Gaps = 34/184 (18%)
Query: 410 ANKLGKGGFGPVYKAKFPGGQQIAVKRLSS---------ASGQGLEEFKNE-------IE 453
             +LG G FG V+   + G  ++AVK L           A    +++ +++       + 
Sbjct: 24  VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 454 TSNSNATIGANVK--AFVREMKTFS--DPTLSALLHWEMRFNIIIGIARGLLYLHQDSRL 509
           T      I   ++  + V  +KT S    T++ LL      ++   IA G+ ++ + +  
Sbjct: 84  TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLL------DMAAQIAEGMAFIEERN-- 135
Query: 510 RIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSKPNEILK-----CINVGLLC 564
             IHRDL+ +NIL+   ++ KI+DFGLA  + D +  A       +K      IN G   
Sbjct: 136 -YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFT 194
Query: 565 VQED 568
           ++ D
Sbjct: 195 IKSD 198

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 24/151 (15%)
Query: 407 FSEANKLGKGGFGPVYKAKFPGGQ-QIAVKRLSSASGQG-----LEEFKNEIETSNSNAT 460
           ++  + +G+G +G V  A     + ++A+K++S    Q      L E K  +   + N  
Sbjct: 25  YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN-I 83
Query: 461 IGAN--VKA-FVREMKT------FSDPTLSALLHWEMRFN-----IIIGIARGLLYLHQD 506
           IG N  ++A  + +MK         +  L  LL  +   N      +  I RGL Y+H  
Sbjct: 84  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 143
Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           +   ++HRDLK SN+LL+   + KI DFGLA
Sbjct: 144 N---VLHRDLKPSNLLLNTTXDLKICDFGLA 171

>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s) Length = 334

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 81/172 (47%), Gaps = 30/172 (17%)
Query: 400 ILAATDNFSEANKLGKGGFGPVYKAKF-PGGQQI----AVKRLSSA-SGQGLEEFKNE-- 451
           IL  T+ F +   L  G FG VYK  + P G+++    A+K L  A S +  +E  +E  
Sbjct: 18  ILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 452 ----IETSNSNATIGANVKAFVREMKTFSDPTLSALLHW----------EMRFNIIIGIA 497
               ++  +    +G  + + V+ +          LL +          +   N  + IA
Sbjct: 77  VMASVDNPHVCRLLGICLTSTVQLITQLM--PFGCLLDYVREHKDNIGSQYLLNWCVQIA 134
Query: 498 RGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA--LDMMDQKLHA 547
           +G+ YL +D RL  +HRDL   N+L+    + KI+DFGLA  L   +++ HA
Sbjct: 135 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 183

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 82/184 (44%), Gaps = 34/184 (18%)
Query: 410 ANKLGKGGFGPVYKAKFPGGQQIAVKRLSS---------ASGQGLEEFKNE-------IE 453
             +LG G FG V+   + G  ++AVK L           A    +++ +++       + 
Sbjct: 18  VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 454 TSNSNATIGANVK--AFVREMKTFS--DPTLSALLHWEMRFNIIIGIARGLLYLHQDSRL 509
           T      I   ++  + V  +KT S    T++ LL      ++   IA G+ ++ + +  
Sbjct: 78  TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLL------DMAAQIAEGMAFIEERN-- 129
Query: 510 RIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSKPNEILK-----CINVGLLC 564
             IHRDL+ +NIL+   ++ KI+DFGLA  + D +  A       +K      IN G   
Sbjct: 130 -YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFT 188
Query: 565 VQED 568
           ++ D
Sbjct: 189 IKSD 192

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 68/158 (43%), Gaps = 39/158 (24%)
Query: 407 FSEANKLGKGGFGPVYKAK-FPGGQQIAVKRLSSASGQGLEEFKNEIE-------TSNSN 458
           FS+  ++G G FG VY A+     + +A+K++S +  Q  E++++ I+         + N
Sbjct: 56  FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 459 AT-------------------IGANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARG 499
                                +G+         K   +  ++A+ H         G  +G
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTH---------GALQG 166
Query: 500 LLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           L YLH  +   +IHRD+K  NILL +    K+ DFG A
Sbjct: 167 LAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSA 201

>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In Complex With Aee788 Length = 327

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 81/172 (47%), Gaps = 30/172 (17%)
Query: 400 ILAATDNFSEANKLGKGGFGPVYKAKF-PGGQQI----AVKRLSSA-SGQGLEEFKNE-- 451
           IL  T+ F +   LG G FG VYK  + P G+++    A+K L  A S +  +E  +E  
Sbjct: 11  ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 452 ----IETSNSNATIGANVKAFVREMKTFSDPTLSALLHW----------EMRFNIIIGIA 497
               ++  +    +G  + + V+ +          LL +          +   N  + IA
Sbjct: 70  VMASVDNPHVCRLLGICLTSTVQLITQLM--PFGCLLDYVREHKDNIGSQYLLNWCVQIA 127
Query: 498 RGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA--LDMMDQKLHA 547
           +G+ YL +D RL  +HRDL   N+L+    + KI+DFG A  L   +++ HA
Sbjct: 128 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 176

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/39 (56%), Positives = 28/39 (71%), Gaps = 3/39 (7%)
Query: 499 GLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           G++YLH    + I HRD+K  N+LLD+  N KISDFGLA
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLA 151

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/39 (56%), Positives = 28/39 (71%), Gaps = 3/39 (7%)
Query: 499 GLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           G++YLH    + I HRD+K  N+LLD+  N KISDFGLA
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLA 151

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/42 (50%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           I   + Y HQ     I+HRDLK  N+LLD +MN KI+DFG +
Sbjct: 122 IVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS 160

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 24/151 (15%)
Query: 407 FSEANKLGKGGFGPVYKAKFPGGQ-QIAVKRLSSASGQG-----LEEFKNEIETSNSNAT 460
           ++  + +G+G +G V  A     + ++A+K++S    Q      L E K  +   + N  
Sbjct: 25  YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN-I 83
Query: 461 IGAN--VKA-FVREMKT------FSDPTLSALLHWEMRFN-----IIIGIARGLLYLHQD 506
           IG N  ++A  + +MK         +  L  LL  +   N      +  I RGL Y+H  
Sbjct: 84  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 143
Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           +   ++HRDLK SN+LL+   + KI DFGLA
Sbjct: 144 N---VLHRDLKPSNLLLNTTCDLKICDFGLA 171

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/154 (24%), Positives = 70/154 (45%), Gaps = 18/154 (11%)
Query: 407 FSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETSN----SNATIG 462
           F++ +++GKG FG VYK      +++   ++        E    + E +      +  I 
Sbjct: 21  FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 463 ANVKAFVREMKTFS-----------DPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRI 511
               ++++  K +            D      L       I+  I +GL YLH +   R 
Sbjct: 81  RYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSE---RK 137
Query: 512 IHRDLKTSNILLDQEMNPKISDFGLALDMMDQKL 545
           IHRD+K +N+LL ++ + K++DFG+A  + D ++
Sbjct: 138 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI 171

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/42 (50%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           I   + Y HQ     I+HRDLK  N+LLD +MN KI+DFG +
Sbjct: 122 IVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS 160

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/39 (56%), Positives = 28/39 (71%), Gaps = 3/39 (7%)
Query: 499 GLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           G++YLH    + I HRD+K  N+LLD+  N KISDFGLA
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLA 151

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/39 (56%), Positives = 28/39 (71%), Gaps = 3/39 (7%)
Query: 499 GLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           G++YLH    + I HRD+K  N+LLD+  N KISDFGLA
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLA 151

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 82/184 (44%), Gaps = 34/184 (18%)
Query: 410 ANKLGKGGFGPVYKAKFPGGQQIAVKRLSS---------ASGQGLEEFKNE-------IE 453
             +LG G FG V+   + G  ++AVK L           A    +++ +++       + 
Sbjct: 27  VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 86
Query: 454 TSNSNATIGANVK--AFVREMKTFS--DPTLSALLHWEMRFNIIIGIARGLLYLHQDSRL 509
           T      I   ++  + V  +KT S    T++ LL      ++   IA G+ ++ + +  
Sbjct: 87  TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLL------DMAAQIAEGMAFIEERN-- 138
Query: 510 RIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSKPNEILK-----CINVGLLC 564
             IHRDL+ +NIL+   ++ KI+DFGLA  + D +  A       +K      IN G   
Sbjct: 139 -YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFT 197
Query: 565 VQED 568
           ++ D
Sbjct: 198 IKSD 201

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 75/157 (47%), Gaps = 20/157 (12%)
Query: 397 FESILAATD---NFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSASGQGLEEFKNEI 452
             SI++  D    ++   K+G+G  G VY A     GQ++A+++++       E   NEI
Sbjct: 9   LRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 68
Query: 453 ET--SNSNATIGANVKAFVR------EMKTFSDPTLSALLHWE-MRFNIIIGIAR----G 499
                N N  I   + +++        M+  +  +L+ ++    M    I  + R     
Sbjct: 69  LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQA 128
Query: 500 LLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGL 536
           L +LH +   ++IHRD+K+ NILL  + + K++DFG 
Sbjct: 129 LEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGF 162

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/39 (56%), Positives = 28/39 (71%), Gaps = 3/39 (7%)
Query: 499 GLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           G++YLH    + I HRD+K  N+LLD+  N KISDFGLA
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLA 151

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/39 (56%), Positives = 28/39 (71%), Gaps = 3/39 (7%)
Query: 499 GLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           G++YLH    + I HRD+K  N+LLD+  N KISDFGLA
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLA 151

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/39 (56%), Positives = 28/39 (71%), Gaps = 3/39 (7%)
Query: 499 GLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           G++YLH    + I HRD+K  N+LLD+  N KISDFGLA
Sbjct: 115 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLA 150

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 75/157 (47%), Gaps = 20/157 (12%)
Query: 397 FESILAATD---NFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSASGQGLEEFKNEI 452
             SI++  D    ++   K+G+G  G VY A     GQ++A+++++       E   NEI
Sbjct: 9   LRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 68
Query: 453 ET--SNSNATIGANVKAFVR------EMKTFSDPTLSALLHWE-MRFNIIIGIAR----G 499
                N N  I   + +++        M+  +  +L+ ++    M    I  + R     
Sbjct: 69  LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQA 128
Query: 500 LLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGL 536
           L +LH +   ++IHRD+K+ NILL  + + K++DFG 
Sbjct: 129 LEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGF 162

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 24/151 (15%)
Query: 407 FSEANKLGKGGFGPVYKAKFPGGQ-QIAVKRLSSASGQG-----LEEFKNEIETSNSNAT 460
           ++  + +G+G +G V  A     + ++A+K++S    Q      L E K  +   + N  
Sbjct: 29  YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN-I 87
Query: 461 IGAN--VKA-FVREMKT------FSDPTLSALLHWEMRFN-----IIIGIARGLLYLHQD 506
           IG N  ++A  + +MK         +  L  LL  +   N      +  I RGL Y+H  
Sbjct: 88  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIHSA 147
Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           +   ++HRDLK SN+LL+   + KI DFGLA
Sbjct: 148 N---VLHRDLKPSNLLLNTTCDLKICDFGLA 175

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 24/151 (15%)
Query: 407 FSEANKLGKGGFGPVYKAKFPGGQ-QIAVKRLSSASGQG-----LEEFKNEIETSNSNAT 460
           ++  + +G+G +G V  A     + ++A+K++S    Q      L E K  +   + N  
Sbjct: 27  YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN-I 85
Query: 461 IGAN--VKA-FVREMKT------FSDPTLSALLHWEMRFN-----IIIGIARGLLYLHQD 506
           IG N  ++A  + +MK         +  L  LL  +   N      +  I RGL Y+H  
Sbjct: 86  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 145
Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           +   ++HRDLK SN+LL+   + KI DFGLA
Sbjct: 146 N---VLHRDLKPSNLLLNTTCDLKICDFGLA 173

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/39 (56%), Positives = 28/39 (71%), Gaps = 3/39 (7%)
Query: 499 GLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           G++YLH    + I HRD+K  N+LLD+  N KISDFGLA
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLA 151

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/42 (50%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           I   + Y HQ     I+HRDLK  N+LLD +MN KI+DFG +
Sbjct: 115 IVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS 153

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 79/182 (43%), Gaps = 30/182 (16%)
Query: 410 ANKLGKGGFGPVYKAKFPGGQQIAVKRLSS---------ASGQGLEEFKNE-------IE 453
             +LG G FG V+   + G  ++AVK L           A    +++ +++       + 
Sbjct: 13  VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 72
Query: 454 TSNSNATIGANVK--AFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRI 511
           T      I   ++  + V  +KT S   L+         ++   IA G+ ++ + +    
Sbjct: 73  TQEPIYIITEYMENGSLVDFLKTPSGIKLTI----NKLLDMAAQIAEGMAFIEERN---Y 125
Query: 512 IHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSKPNEILK-----CINVGLLCVQ 566
           IHRDL+ +NIL+   ++ KI+DFGLA  + D +  A       +K      IN G   ++
Sbjct: 126 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 185
Query: 567 ED 568
            D
Sbjct: 186 SD 187

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 75/157 (47%), Gaps = 20/157 (12%)
Query: 397 FESILAATD---NFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSASGQGLEEFKNEI 452
             SI++  D    ++   K+G+G  G VY A     GQ++A+++++       E   NEI
Sbjct: 9   LRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 68
Query: 453 ET--SNSNATIGANVKAFVR------EMKTFSDPTLSALLHWE-MRFNIIIGIAR----G 499
                N N  I   + +++        M+  +  +L+ ++    M    I  + R     
Sbjct: 69  LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQA 128
Query: 500 LLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGL 536
           L +LH +   ++IHRD+K+ NILL  + + K++DFG 
Sbjct: 129 LEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGF 162

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/39 (56%), Positives = 28/39 (71%), Gaps = 3/39 (7%)
Query: 499 GLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           G++YLH    + I HRD+K  N+LLD+  N KISDFGLA
Sbjct: 117 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLA 152

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/39 (56%), Positives = 28/39 (71%), Gaps = 3/39 (7%)
Query: 499 GLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           G++YLH    + I HRD+K  N+LLD+  N KISDFGLA
Sbjct: 117 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLA 152

>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The Gefitinib/erlotinib Resistant Egfr Kinase Domain L858r+t790m Length = 329

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 81/172 (47%), Gaps = 30/172 (17%)
Query: 400 ILAATDNFSEANKLGKGGFGPVYKAKF-PGGQQI----AVKRLSSA-SGQGLEEFKNE-- 451
           IL  T+ F +   LG G FG VYK  + P G+++    A+K L  A S +  +E  +E  
Sbjct: 13  ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 452 ----IETSNSNATIGANVKAFVREMKTFSDPTLSALLHW----------EMRFNIIIGIA 497
               ++  +    +G  + + V+ +          LL +          +   N  + IA
Sbjct: 72  VMASVDNPHVCRLLGICLTSTVQLIMQLM--PFGCLLDYVREHKDNIGSQYLLNWCVQIA 129
Query: 498 RGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA--LDMMDQKLHA 547
           +G+ YL +D RL  +HRDL   N+L+    + KI+DFG A  L   +++ HA
Sbjct: 130 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 178

>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285 Length = 331

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 81/172 (47%), Gaps = 30/172 (17%)
Query: 400 ILAATDNFSEANKLGKGGFGPVYKAKF-PGGQQI----AVKRLSSA-SGQGLEEFKNE-- 451
           IL  T+ F +   LG G FG VYK  + P G+++    A+K L  A S +  +E  +E  
Sbjct: 15  ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 73
Query: 452 ----IETSNSNATIGANVKAFVREMKTFSDPTLSALLHW----------EMRFNIIIGIA 497
               ++  +    +G  + + V+ +          LL +          +   N  + IA
Sbjct: 74  VMASVDNPHVCRLLGICLTSTVQLIMQLM--PFGCLLDYVREHKDNIGSQYLLNWCVQIA 131
Query: 498 RGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA--LDMMDQKLHA 547
           +G+ YL +D RL  +HRDL   N+L+    + KI+DFG A  L   +++ HA
Sbjct: 132 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 180

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 24/151 (15%)
Query: 407 FSEANKLGKGGFGPVYKAKFPGGQ-QIAVKRLSSASGQG-----LEEFKNEIETSNSNAT 460
           ++  + +G+G +G V  A     + ++A+K++S    Q      L E K  +   + N  
Sbjct: 33  YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN-I 91
Query: 461 IGAN--VKA-FVREMKT------FSDPTLSALLHWEMRFN-----IIIGIARGLLYLHQD 506
           IG N  ++A  + +MK         +  L  LL  +   N      +  I RGL Y+H  
Sbjct: 92  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 151
Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           +   ++HRDLK SN+LL+   + KI DFGLA
Sbjct: 152 N---VLHRDLKPSNLLLNTTCDLKICDFGLA 179

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 24/151 (15%)
Query: 407 FSEANKLGKGGFGPVYKAKFPGGQ-QIAVKRLSSASGQG-----LEEFKNEIETSNSNAT 460
           ++  + +G+G +G V  A     + ++A+K++S    Q      L E K  +   + N  
Sbjct: 25  YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN-I 83
Query: 461 IGAN--VKA-FVREMKT------FSDPTLSALLHWEMRFN-----IIIGIARGLLYLHQD 506
           IG N  ++A  + +MK         +  L  LL  +   N      +  I RGL Y+H  
Sbjct: 84  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 143
Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           +   ++HRDLK SN+LL+   + KI DFGLA
Sbjct: 144 N---VLHRDLKPSNLLLNTTCDLKICDFGLA 171

>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In Complex With Amppnp Length = 334

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 81/172 (47%), Gaps = 30/172 (17%)
Query: 400 ILAATDNFSEANKLGKGGFGPVYKAKF-PGGQQI----AVKRLSSA-SGQGLEEFKNE-- 451
           IL  T+ F +   LG G FG VYK  + P G+++    A+K L  A S +  +E  +E  
Sbjct: 18  ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 452 ----IETSNSNATIGANVKAFVREMKTFSDPTLSALLHW----------EMRFNIIIGIA 497
               ++  +    +G  + + V+ +          LL +          +   N  + IA
Sbjct: 77  VMASVDNPHVCRLLGICLTSTVQLITQLM--PFGCLLDYVREHKDNIGSQYLLNWCVQIA 134
Query: 498 RGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA--LDMMDQKLHA 547
           +G+ YL +D RL  +HRDL   N+L+    + KI+DFG A  L   +++ HA
Sbjct: 135 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 183

>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 68/161 (42%), Gaps = 24/161 (14%)
Query: 398 ESILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSA------SGQGLEEFKN 450
           ++I    + +   + +G G +G V  A     G ++AVK+LS        + +   E + 
Sbjct: 15  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 451 EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI--------------IIGI 496
                + N     +V    R ++ F+D  L   L      NI              I  I
Sbjct: 75  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            RGL Y+H      IIHRDLK SN+ ++++   KI  FGLA
Sbjct: 135 LRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILGFGLA 172

>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 81/172 (47%), Gaps = 30/172 (17%)
Query: 400 ILAATDNFSEANKLGKGGFGPVYKAKF-PGGQQI----AVKRLSSA-SGQGLEEFKNE-- 451
           IL  T+ F +   L  G FG VYK  + P G+++    A+K L  A S +  +E  +E  
Sbjct: 18  ILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 452 ----IETSNSNATIGANVKAFVREMKTFSDPTLSALLHW----------EMRFNIIIGIA 497
               ++  +    +G  + + V+ +          LL +          +   N  + IA
Sbjct: 77  VMASVDNPHVCRLLGICLTSTVQLIMQLM--PFGCLLDYVREHKDNIGSQYLLNWCVQIA 134
Query: 498 RGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA--LDMMDQKLHA 547
           +G+ YL +D RL  +HRDL   N+L+    + KI+DFGLA  L   +++ HA
Sbjct: 135 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 183

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/39 (56%), Positives = 28/39 (71%), Gaps = 3/39 (7%)
Query: 499 GLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           G++YLH    + I HRD+K  N+LLD+  N KISDFGLA
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLA 151

>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase Domain From Human Length = 314

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 453 ETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQD------ 506
           E   SN  +   +     +  + +D     ++ W    ++   ++RGL YLH+D      
Sbjct: 78  EKRGSNLEVELWLITAFHDKGSLTDYLKGNIITWNELCHVAETMSRGLSYLHEDVPWCRG 137
Query: 507 --SRLRIIHRDLKTSNILLDQEMNPKISDFGLAL 538
              +  I HRD K+ N+LL  ++   ++DFGLA+
Sbjct: 138 EGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAV 171

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/39 (56%), Positives = 28/39 (71%), Gaps = 3/39 (7%)
Query: 499 GLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           G++YLH    + I HRD+K  N+LLD+  N KISDFGLA
Sbjct: 117 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLA 152

>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Inhibitor Length = 326

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 85/191 (44%), Gaps = 35/191 (18%)
Query: 372 VKDMVVDSDQFKEEEKQGIDLPFIDFESILAATDNFSEANKLGKGGFGPVYKAKFPGGQQ 431
           +KD++ D          G  LP +  +  +A T    E+  +GKG FG V++ K+ G ++
Sbjct: 3   LKDLIYDMTT----SGSGSGLPLL-VQRTIARTIVLQES--IGKGRFGEVWRGKWRG-EE 54
Query: 432 IAVKRLSSASGQGLEEFKNEIETSNSNATIGANVKAFV----REMKTFSDPTL------- 480
           +AVK  SS   +    +  E E   +      N+  F+    ++  T++   L       
Sbjct: 55  VAVKIFSSREERS---WFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEH 111
Query: 481 SALLHWEMRFNIII--------GIARGLLYLHQD-----SRLRIIHRDLKTSNILLDQEM 527
            +L  +  R+ + +          A GL +LH +      +  I HRDLK+ NIL+ +  
Sbjct: 112 GSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNG 171
Query: 528 NPKISDFGLAL 538
              I+D GLA+
Sbjct: 172 TCCIADLGLAV 182

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 75/157 (47%), Gaps = 20/157 (12%)
Query: 397 FESILAATD---NFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSASGQGLEEFKNEI 452
             SI++  D    ++   K+G+G  G VY A     GQ++A+++++       E   NEI
Sbjct: 10  LRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 69
Query: 453 ET--SNSNATIGANVKAFVR------EMKTFSDPTLSALLHWE-MRFNIIIGIAR----G 499
                N N  I   + +++        M+  +  +L+ ++    M    I  + R     
Sbjct: 70  LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQA 129
Query: 500 LLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGL 536
           L +LH +   ++IHRD+K+ NILL  + + K++DFG 
Sbjct: 130 LEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGF 163

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 64/142 (45%), Gaps = 19/142 (13%)
Query: 412 KLGKGGFGPVYKAKFPGGQQIAV-KRLSSASGQGLEEFKNEIE--TSNSNATIGANVKAF 468
           +LG G FG VYKA+      +A  K + + S + LE++  EI+   S  +  I   + AF
Sbjct: 44  ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 469 VREMKTF-------SDPTLSALLHWEMRFN------IIIGIARGLLYLHQDSRLRIIHRD 515
             E   +            + +L  E          +       L YLH +   +IIHRD
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---KIIHRD 160
Query: 516 LKTSNILLDQEMNPKISDFGLA 537
           LK  NIL   + + K++DFG++
Sbjct: 161 LKAGNILFTLDGDIKLADFGVS 182

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 24/151 (15%)
Query: 407 FSEANKLGKGGFGPVYKAKFPGGQ-QIAVKRLSSASGQG-----LEEFKNEIETSNSNAT 460
           ++  + +G+G +G V  A     + ++A+K++S    Q      L E K  +   + N  
Sbjct: 29  YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN-I 87
Query: 461 IGAN--VKA-FVREMKT------FSDPTLSALLHWEMRFN-----IIIGIARGLLYLHQD 506
           IG N  ++A  + +MK         +  L  LL  +   N      +  I RGL Y+H  
Sbjct: 88  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 147
Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           +   ++HRDLK SN+LL+   + KI DFGLA
Sbjct: 148 N---VLHRDLKPSNLLLNTTXDLKICDFGLA 175

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/39 (56%), Positives = 28/39 (71%), Gaps = 3/39 (7%)
Query: 499 GLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           G++YLH    + I HRD+K  N+LLD+  N KISDFGLA
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLA 151

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/39 (56%), Positives = 28/39 (71%), Gaps = 3/39 (7%)
Query: 499 GLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           G++YLH    + I HRD+K  N+LLD+  N KISDFGLA
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLA 151

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 64/142 (45%), Gaps = 19/142 (13%)
Query: 412 KLGKGGFGPVYKAKFPGGQQIAV-KRLSSASGQGLEEFKNEIE--TSNSNATIGANVKAF 468
           +LG G FG VYKA+      +A  K + + S + LE++  EI+   S  +  I   + AF
Sbjct: 44  ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 469 VREMKTF-------SDPTLSALLHWEMRFN------IIIGIARGLLYLHQDSRLRIIHRD 515
             E   +            + +L  E          +       L YLH +   +IIHRD
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---KIIHRD 160
Query: 516 LKTSNILLDQEMNPKISDFGLA 537
           LK  NIL   + + K++DFG++
Sbjct: 161 LKAGNILFTLDGDIKLADFGVS 182

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 15/142 (10%)
Query: 413 LGKGGFGPVYKAKFPGGQQIAVKRLSSASGQG--LEEFKNEIETSNSNAT--IGANVKAF 468
           +G+G FG V KAK+   + +A+K++ S S +   + E +     ++ N     GA +   
Sbjct: 16  VGRGAFGVVCKAKW-RAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACLNPV 74
Query: 469 VREMKTFSDPTLSALLH---------WEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTS 519
              M+     +L  +LH              +  +  ++G+ YLH      +IHRDLK  
Sbjct: 75  CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPP 134
Query: 520 NILLDQEMNP-KISDFGLALDM 540
           N+LL       KI DFG A D+
Sbjct: 135 NLLLVAGGTVLKICDFGTACDI 156

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/39 (56%), Positives = 28/39 (71%), Gaps = 3/39 (7%)
Query: 499 GLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           G++YLH    + I HRD+K  N+LLD+  N KISDFGLA
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLA 151

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 64/142 (45%), Gaps = 19/142 (13%)
Query: 412 KLGKGGFGPVYKAKFPGGQQIAV-KRLSSASGQGLEEFKNEIE--TSNSNATIGANVKAF 468
           +LG G FG VYKA+      +A  K + + S + LE++  EI+   S  +  I   + AF
Sbjct: 44  ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 469 VREMKTF-------SDPTLSALLHWEMRFN------IIIGIARGLLYLHQDSRLRIIHRD 515
             E   +            + +L  E          +       L YLH +   +IIHRD
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---KIIHRD 160
Query: 516 LKTSNILLDQEMNPKISDFGLA 537
           LK  NIL   + + K++DFG++
Sbjct: 161 LKAGNILFTLDGDIKLADFGVS 182

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 15/142 (10%)
Query: 413 LGKGGFGPVYKAKFPGGQQIAVKRLSSASGQG--LEEFKNEIETSNSNAT--IGANVKAF 468
           +G+G FG V KAK+   + +A+K++ S S +   + E +     ++ N     GA +   
Sbjct: 17  VGRGAFGVVCKAKW-RAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACLNPV 75
Query: 469 VREMKTFSDPTLSALLH---------WEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTS 519
              M+     +L  +LH              +  +  ++G+ YLH      +IHRDLK  
Sbjct: 76  CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPP 135
Query: 520 NILLDQEMNP-KISDFGLALDM 540
           N+LL       KI DFG A D+
Sbjct: 136 NLLLVAGGTVLKICDFGTACDI 157

>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 65/166 (39%), Gaps = 33/166 (19%)
Query: 401 LAATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQGLEEFKNEIETSNS-N 458
           L    +F E   LG+G FG V KA+     +  A+K++     + L    +E+    S N
Sbjct: 2   LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVXLLASLN 60
Query: 459 ATIGANVKAFVREMKTFSDP--------------------TLSALLHWE-------MRFN 491
                   A   E + F  P                    TL  L+H E         + 
Sbjct: 61  HQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWR 120
Query: 492 IIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           +   I   L Y+H      IIHR+LK  NI +D+  N KI DFGLA
Sbjct: 121 LFRQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLA 163

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/39 (56%), Positives = 28/39 (71%), Gaps = 3/39 (7%)
Query: 499 GLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           G++YLH    + I HRD+K  N+LLD+  N KISDFGLA
Sbjct: 117 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLA 152

>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In Complex With Mig6 Peptide Length = 329

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 81/172 (47%), Gaps = 30/172 (17%)
Query: 400 ILAATDNFSEANKLGKGGFGPVYKAKF-PGGQQI----AVKRLSSA-SGQGLEEFKNE-- 451
           IL  T+ F +   LG G FG VYK  + P G+++    A+K L  A S +  +E  +E  
Sbjct: 13  ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 452 ----IETSNSNATIGANVKAFVREMKTFSDPTLSALLHW----------EMRFNIIIGIA 497
               ++  +    +G  + + V+ +          LL +          +   N  + IA
Sbjct: 72  VMASVDNPHVCRLLGICLTSTVQLIMQLM--PFGCLLDYVREHKDNIGSQYLLNWCVQIA 129
Query: 498 RGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA--LDMMDQKLHA 547
           +G+ YL +D RL  +HRDL   N+L+    + KI+DFG A  L   +++ HA
Sbjct: 130 KGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 178

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 24/151 (15%)
Query: 407 FSEANKLGKGGFGPVYKAKFPGGQ-QIAVKRLSSASGQG-----LEEFKNEIETSNSNAT 460
           ++  + +G+G +G V  A     + ++A+K++S    Q      L E K  +   + N  
Sbjct: 23  YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN-I 81
Query: 461 IGAN--VKA-FVREMKT------FSDPTLSALLHWEMRFN-----IIIGIARGLLYLHQD 506
           IG N  ++A  + +MK         +  L  LL  +   N      +  I RGL Y+H  
Sbjct: 82  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 141
Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           +   ++HRDLK SN+LL+   + KI DFGLA
Sbjct: 142 N---VLHRDLKPSNLLLNTTCDLKICDFGLA 169

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 24/151 (15%)
Query: 407 FSEANKLGKGGFGPVYKAKFPGGQ-QIAVKRLSSASGQG-----LEEFKNEIETSNSNAT 460
           ++  + +G+G +G V  A     + ++A+K++S    Q      L E K  +   + N  
Sbjct: 23  YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN-I 81
Query: 461 IGAN--VKA-FVREMKT------FSDPTLSALLHWEMRFN-----IIIGIARGLLYLHQD 506
           IG N  ++A  + +MK         +  L  LL  +   N      +  I RGL Y+H  
Sbjct: 82  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 141
Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           +   ++HRDLK SN+LL+   + KI DFGLA
Sbjct: 142 N---VLHRDLKPSNLLLNTTCDLKICDFGLA 169

>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 24/151 (15%)
Query: 407 FSEANKLGKGGFGPVYKAKFPGGQ-QIAVKRLSSASGQG-----LEEFKNEIETSNSNAT 460
           ++  + +G+G +G V  A     + ++A+K++S    Q      L E K  +   + N  
Sbjct: 29  YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN-I 87
Query: 461 IGAN--VKA-FVREMKT------FSDPTLSALLHWEMRFN-----IIIGIARGLLYLHQD 506
           IG N  ++A  + +MK         +  L  LL  +   N      +  I RGL Y+H  
Sbjct: 88  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 147
Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           +   ++HRDLK SN+LL+   + KI DFGLA
Sbjct: 148 N---VLHRDLKPSNLLLNTTCDLKICDFGLA 175

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 24/151 (15%)
Query: 407 FSEANKLGKGGFGPVYKAKFPGGQ-QIAVKRLSSASGQG-----LEEFKNEIETSNSNAT 460
           ++  + +G+G +G V  A     + ++A+K++S    Q      L E K  +   + N  
Sbjct: 30  YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN-I 88
Query: 461 IGAN--VKA-FVREMKT------FSDPTLSALLHWEMRFN-----IIIGIARGLLYLHQD 506
           IG N  ++A  + +MK         +  L  LL  +   N      +  I RGL Y+H  
Sbjct: 89  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 148
Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           +   ++HRDLK SN+LL+   + KI DFGLA
Sbjct: 149 N---VLHRDLKPSNLLLNTTCDLKICDFGLA 176

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 24/151 (15%)
Query: 407 FSEANKLGKGGFGPVYKAKFPGGQ-QIAVKRLSSASGQG-----LEEFKNEIETSNSNAT 460
           ++  + +G+G +G V  A     + ++A+K++S    Q      L E K  +   + N  
Sbjct: 31  YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN-I 89
Query: 461 IGAN--VKA-FVREMKT------FSDPTLSALLHWEMRFN-----IIIGIARGLLYLHQD 506
           IG N  ++A  + +MK         +  L  LL  +   N      +  I RGL Y+H  
Sbjct: 90  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 149
Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           +   ++HRDLK SN+LL+   + KI DFGLA
Sbjct: 150 N---VLHRDLKPSNLLLNTTCDLKICDFGLA 177

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 24/151 (15%)
Query: 407 FSEANKLGKGGFGPVYKAKFPGGQ-QIAVKRLSSASGQG-----LEEFKNEIETSNSNAT 460
           ++  + +G+G +G V  A     + ++A+K++S    Q      L E K  +   + N  
Sbjct: 22  YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN-I 80
Query: 461 IGAN--VKA-FVREMKT------FSDPTLSALLHWEMRFN-----IIIGIARGLLYLHQD 506
           IG N  ++A  + +MK         +  L  LL  +   N      +  I RGL Y+H  
Sbjct: 81  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 140
Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           +   ++HRDLK SN+LL+   + KI DFGLA
Sbjct: 141 N---VLHRDLKPSNLLLNTTCDLKICDFGLA 168

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 24/151 (15%)
Query: 407 FSEANKLGKGGFGPVYKAKFPGGQ-QIAVKRLSSASGQG-----LEEFKNEIETSNSNAT 460
           ++  + +G+G +G V  A     + ++A+K++S    Q      L E K  +   + N  
Sbjct: 29  YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN-I 87
Query: 461 IGAN--VKA-FVREMKT------FSDPTLSALLHWEMRFN-----IIIGIARGLLYLHQD 506
           IG N  ++A  + +MK         +  L  LL  +   N      +  I RGL Y+H  
Sbjct: 88  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 147
Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           +   ++HRDLK SN+LL+   + KI DFGLA
Sbjct: 148 N---VLHRDLKPSNLLLNTTCDLKICDFGLA 175

>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 24/151 (15%)
Query: 407 FSEANKLGKGGFGPVYKAKFPGGQ-QIAVKRLSSASGQG-----LEEFKNEIETSNSNAT 460
           ++  + +G+G +G V  A     + ++A+K++S    Q      L E K  +   + N  
Sbjct: 30  YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN-I 88
Query: 461 IGAN--VKA-FVREMKT------FSDPTLSALLHWEMRFN-----IIIGIARGLLYLHQD 506
           IG N  ++A  + +MK         +  L  LL  +   N      +  I RGL Y+H  
Sbjct: 89  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 148
Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           +   ++HRDLK SN+LL+   + KI DFGLA
Sbjct: 149 N---VLHRDLKPSNLLLNTTCDLKICDFGLA 176

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 24/151 (15%)
Query: 407 FSEANKLGKGGFGPVYKAKFPGGQ-QIAVKRLSSASGQG-----LEEFKNEIETSNSNAT 460
           ++  + +G+G +G V  A     + ++A+K++S    Q      L E K  +   + N  
Sbjct: 45  YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN-I 103
Query: 461 IGAN--VKA-FVREMKT------FSDPTLSALLHWEMRFN-----IIIGIARGLLYLHQD 506
           IG N  ++A  + +MK         +  L  LL  +   N      +  I RGL Y+H  
Sbjct: 104 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 163
Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           +   ++HRDLK SN+LL+   + KI DFGLA
Sbjct: 164 N---VLHRDLKPSNLLLNTTCDLKICDFGLA 191

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 66/163 (40%), Gaps = 39/163 (23%)
Query: 402 AATDNFSEANKLGKGGFGPVYKAK-FPGGQQIAVKRLSSASGQGLEE------------- 447
           A  D F     LG G FG V   K    G   A+K L       L+E             
Sbjct: 38  AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQA 97
Query: 448 ----FKNEIETS---NSNATI------GANVKAFVREMKTFSDPTLSALLHWEMRFNIII 494
               F  ++E S   NSN  +      G  + + +R +  FS+P          RF    
Sbjct: 98  VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP--------HARF-YAA 148
Query: 495 GIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            I     YLH    L +I+RDLK  N+++DQ+   K++DFGLA
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGLA 188

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 24/151 (15%)
Query: 407 FSEANKLGKGGFGPVYKAKFPGGQ-QIAVKRLSSASGQG-----LEEFKNEIETSNSNAT 460
           ++  + +G+G +G V  A     + ++A+K++S    Q      L E K  +   + N  
Sbjct: 29  YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHEN-I 87
Query: 461 IGAN--VKA-FVREMKT------FSDPTLSALLHWEMRFN-----IIIGIARGLLYLHQD 506
           IG N  ++A  + +MK         +  L  LL  +   N      +  I RGL Y+H  
Sbjct: 88  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 147
Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           +   ++HRDLK SN+LL+   + KI DFGLA
Sbjct: 148 N---VLHRDLKPSNLLLNTTXDLKICDFGLA 175

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 24/151 (15%)
Query: 407 FSEANKLGKGGFGPVYKAKFPGGQ-QIAVKRLSSASGQG-----LEEFKNEIETSNSNAT 460
           ++  + +G+G +G V  A     + ++A+K++S    Q      L E K  +   + N  
Sbjct: 27  YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHEN-I 85
Query: 461 IGAN--VKA-FVREMKT------FSDPTLSALLHWEMRFN-----IIIGIARGLLYLHQD 506
           IG N  ++A  + +MK         +  L  LL  +   N      +  I RGL Y+H  
Sbjct: 86  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 145
Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           +   ++HRDLK SN+LL+   + KI DFGLA
Sbjct: 146 N---VLHRDLKPSNLLLNTTCDLKICDFGLA 173

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 68/161 (42%), Gaps = 24/161 (14%)
Query: 398 ESILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSA------SGQGLEEFKN 450
           ++I    + +   + +G G +G V  A     G ++AVK+LS        + +   E + 
Sbjct: 15  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 451 EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI--------------IIGI 496
                + N     +V    R ++ F+D  L   L      NI              I  I
Sbjct: 75  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            RGL Y+H      IIHRDLK SN+ ++++   KI D GLA
Sbjct: 135 LRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDAGLA 172

>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 492 IIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSKP 551
           II  +     Y+H +    I HRD+K SNIL+D+    K+SDFG +  M+D+K+  S   
Sbjct: 156 IIKSVLNSFSYIHNEKN--ICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSRGT 213
Query: 552 NEIL 555
            E +
Sbjct: 214 YEFM 217

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 73/151 (48%), Gaps = 24/151 (15%)
Query: 407 FSEANKLGKGGFGPVYKAKFPGGQ-QIAVKRLSSASGQG-----LEEFKNEIETSNSNAT 460
           ++  + +G+G +G V  A     + ++A+K++S    Q      L E K  +   + N  
Sbjct: 45  YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN-I 103
Query: 461 IGAN--VKA-FVREMKTFSDPT------LSALLHWEMRFN-----IIIGIARGLLYLHQD 506
           IG N  ++A  + +MK     T      L  LL  +   N      +  I RGL Y+H  
Sbjct: 104 IGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 163
Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           +   ++HRDLK SN+LL+   + KI DFGLA
Sbjct: 164 N---VLHRDLKPSNLLLNTTXDLKICDFGLA 191

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 24/158 (15%)
Query: 401 LAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSASGQG-----------LEEF 448
           ++++  F +  KLG G +  VYK      G  +A+K +   S +G           ++E 
Sbjct: 1   MSSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKEL 60
Query: 449 KNEIETSNSNATIGANVKAFVRE-----MKTFSDPTLSALLHWEMRFNII----IGIARG 499
           K+E      +     N    V E     +K + D          +  N++      + +G
Sbjct: 61  KHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQG 120
Query: 500 LLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           L + H++   +I+HRDLK  N+L+++    K+ DFGLA
Sbjct: 121 LAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLA 155

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 24/151 (15%)
Query: 407 FSEANKLGKGGFGPVYKAKFPGGQ-QIAVKRLSSASGQG-----LEEFKNEIETSNSNAT 460
           ++  + +G+G +G V  A     + ++A+K++S    Q      L E K  +   + N  
Sbjct: 27  YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHEN-I 85
Query: 461 IGAN--VKA-FVREMKT------FSDPTLSALLHWEMRFN-----IIIGIARGLLYLHQD 506
           IG N  ++A  + +MK         +  L  LL  +   N      +  I RGL Y+H  
Sbjct: 86  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 145
Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           +   ++HRDLK SN+LL+   + KI DFGLA
Sbjct: 146 N---VLHRDLKPSNLLLNTTSDLKICDFGLA 173

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 74/157 (47%), Gaps = 22/157 (14%)
Query: 405 DNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRL-----SSASGQGLEEFKNEIETSNSN 458
           D+F + ++LG G  G V+K    P G  +A K +      +   Q + E +  +   NS 
Sbjct: 9   DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQV-LHECNSP 67
Query: 459 ATIGANVKAFVRE------MKTFSDPTLSALLHWEMRF------NIIIGIARGLLYLHQD 506
             +G    AF  +      M+     +L  +L    R        + I + +GL YL + 
Sbjct: 68  YIVGF-YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE- 125
Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQ 543
            + +I+HRD+K SNIL++     K+ DFG++  ++D+
Sbjct: 126 -KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDE 161

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           I   L YLH      IIHRDLK  NILL+++M+ +I+DFG A
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTA 179

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 68/161 (42%), Gaps = 24/161 (14%)
Query: 398 ESILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSA------SGQGLEEFKN 450
           ++I    + +   + +G G +G V  A     G ++AVK+LS        + +   E + 
Sbjct: 15  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 451 EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI--------------IIGI 496
                + N     +V    R ++ F+D  L   L      NI              I  I
Sbjct: 75  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            RGL Y+H      IIHRDLK SN+ ++++   KI D GLA
Sbjct: 135 LRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDRGLA 172

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           I   L YLH      IIHRDLK  NILL+++M+ +I+DFG A
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTA 179

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           I   L YLH      IIHRDLK  NILL+++M+ +I+DFG A
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTA 179

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           I   L YLH      IIHRDLK  NILL+++M+ +I+DFG A
Sbjct: 142 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTA 180

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           I   L YLH      IIHRDLK  NILL+++M+ +I+DFG A
Sbjct: 142 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTA 180

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           I   L YLH      IIHRDLK  NILL+++M+ +I+DFG A
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTA 179

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           I   L YLH      IIHRDLK  NILL+++M+ +I+DFG A
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTA 177

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 62/139 (44%), Gaps = 17/139 (12%)
Query: 412 KLGKGGFGPVYKA-KFPGGQQIAVKRLSSASGQGLEEFKNEIETSN-----------SNA 459
           K+G+G  G V  A +   G+Q+AVK++     Q  E   NE+               S+ 
Sbjct: 52  KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 460 TIGANVKAFVR--EMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLK 517
            +G  +   +   E    +D      ++ E    + + + R L YLH      +IHRD+K
Sbjct: 112 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQG---VIHRDIK 168
Query: 518 TSNILLDQEMNPKISDFGL 536
           + +ILL  +   K+SDFG 
Sbjct: 169 SDSILLTSDGRIKLSDFGF 187

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           I   L YLH      IIHRDLK  NILL+++M+ +I+DFG A
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTA 179

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           I   L YLH      IIHRDLK  NILL+++M+ +I+DFG A
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTA 177

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           I   L YLH      IIHRDLK  NILL+++M+ +I+DFG A
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTA 177

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           I   L YLH      IIHRDLK  NILL+++M+ +I+DFG A
Sbjct: 146 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTA 184

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           I   L YLH      IIHRDLK  NILL+++M+ +I+DFG A
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTA 177

>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 38/160 (23%)
Query: 413 LGKGGFGPVYKAKFPGG---QQIAVKRLSS-ASGQGLEEFKNEIET-------SNSNATI 461
           +G+G FG V KA+          A+KR+   AS     +F  E+E         N    +
Sbjct: 30  IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 89
Query: 462 GA-----------------NVKAFVREMKTF-SDPTLS------ALLHWEMRFNIIIGIA 497
           GA                 N+  F+R+ +   +DP  +      + L  +   +    +A
Sbjct: 90  GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 149
Query: 498 RGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           RG+ YL Q    + IHR+L   NIL+ +    KI+DFGL+
Sbjct: 150 RGMDYLSQK---QFIHRNLAARNILVGENYVAKIADFGLS 186

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           I   L YLH      IIHRDLK  NILL+++M+ +I+DFG A
Sbjct: 144 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTA 182

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           I   L YLH      IIHRDLK  NILL+++M+ +I+DFG A
Sbjct: 118 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTA 156

>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 465 VKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLD 524
           V   V +      PTL  L   + RF     + +G+ YLH     +IIHRD+K SN+L+ 
Sbjct: 116 VFELVNQGPVMEVPTLKPLSEDQARF-YFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVG 171
Query: 525 QEMNPKISDFGLA 537
           ++ + KI+DFG++
Sbjct: 172 EDGHIKIADFGVS 184

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           I   L YLH      IIHRDLK  NILL+++M+ +I+DFG A
Sbjct: 116 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTA 154

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           I   L YLH      IIHRDLK  NILL+++M+ +I+DFG A
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTA 179

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           I   L YLH      IIHRDLK  NILL+++M+ +I+DFG A
Sbjct: 117 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTA 155

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           I   L YLH      IIHRDLK  NILL+++M+ +I+DFG A
Sbjct: 119 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTA 157

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 73/183 (39%), Gaps = 36/183 (19%)
Query: 412 KLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETSNS---------NATIG 462
           KLG G FG V+ A +    ++AVK +   S   +E F  E     +         +A + 
Sbjct: 195 KLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT 253
Query: 463 ANVKAFVREMKT------------FSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLR 510
                 + E                S   L  L+ +  +      IA G+ ++ Q +   
Sbjct: 254 KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQ------IAEGMAFIEQRN--- 304
Query: 511 IIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSKPNEILK-----CINVGLLCV 565
            IHRDL+ +NIL+   +  KI+DFGLA  + D +  A       +K      IN G   +
Sbjct: 305 YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTI 364
Query: 566 QED 568
           + D
Sbjct: 365 KSD 367

>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 8/66 (12%)
Query: 473 KTFSDPTLSALLHWE-MRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKI 531
           K F  P     LH + + +N+++G+     Y+H      I+HRDLK +N L++Q+ + K+
Sbjct: 145 KLFRTPVYLTELHIKTLLYNLLVGVK----YVHSAG---ILHRDLKPANCLVNQDCSVKV 197
Query: 532 SDFGLA 537
            DFGLA
Sbjct: 198 CDFGLA 203

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           I   L YLH      IIHRDLK  NILL+++M+ +I+DFG A
Sbjct: 138 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTA 176

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           I   L YLH      IIHRDLK  NILL+++M+ +I+DFG A
Sbjct: 138 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTA 176

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           I   L YLH      IIHRDLK  NILL+++M+ +I+DFG A
Sbjct: 123 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTA 161

>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 68/161 (42%), Gaps = 24/161 (14%)
Query: 398 ESILAATDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSA------SGQGLEEFKN 450
           ++I    + +   + +G G +G V  A     G ++AVK+LS        + +   E + 
Sbjct: 15  KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 451 EIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI--------------IIGI 496
                + N     +V    R ++ F+D  L   L      NI              I  I
Sbjct: 75  LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            RGL Y+H      IIHRDLK SN+ ++++   KI D GLA
Sbjct: 135 LRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDGGLA 172

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/48 (47%), Positives = 33/48 (68%), Gaps = 4/48 (8%)
Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALD-MMD 542
           I+ GL +LH+     II+RDLK  N++LD E + KI+DFG+  + MMD
Sbjct: 129 ISIGLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMD 173

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 24/151 (15%)
Query: 407 FSEANKLGKGGFGPVYKAKFPGGQ-QIAVKRLSSASGQG-----LEEFKNEIETSNSNAT 460
           ++  + +G+G +G V  A     + ++A++++S    Q      L E K  +   + N  
Sbjct: 29  YTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHEN-I 87
Query: 461 IGAN--VKA-FVREMKT------FSDPTLSALLHWEMRFN-----IIIGIARGLLYLHQD 506
           IG N  ++A  + +MK         +  L  LL  +   N      +  I RGL Y+H  
Sbjct: 88  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 147
Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           +   ++HRDLK SN+LL+   + KI DFGLA
Sbjct: 148 N---VLHRDLKPSNLLLNTTCDLKICDFGLA 175

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 19/151 (12%)
Query: 412 KLGKGGFGPVYKAKFPGGQQIAVKRLSSAS---------GQGLEEFKNEIETSNSNATIG 462
           +LG G FG V+   + G  ++A+K L   +          Q +++ K++ +     A + 
Sbjct: 16  RLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHD-KLVQLYAVVS 74
Query: 463 ANVKAFVRE------MKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDL 516
                 V E      +  F        L      ++   +A G+ Y+    R+  IHRDL
Sbjct: 75  EEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE---RMNYIHRDL 131
Query: 517 KTSNILLDQEMNPKISDFGLALDMMDQKLHA 547
           +++NIL+   +  KI+DFGLA  + D +  A
Sbjct: 132 RSANILVGNGLICKIADFGLARLIEDNEXTA 162

>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 22/156 (14%)
Query: 405 DNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRL-----SSASGQGLEEFKNEIETSNSN 458
           D+F + ++LG G  G V+K    P G  +A K +      +   Q + E +  +   NS 
Sbjct: 68  DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQV-LHECNSP 126
Query: 459 ATIGANVKAFVRE------MKTFSDPTLSALLHWEMRF------NIIIGIARGLLYLHQD 506
             +G    AF  +      M+     +L  +L    R        + I + +GL YL + 
Sbjct: 127 YIVGF-YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE- 184
Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD 542
            + +I+HRD+K SNIL++     K+ DFG++  ++D
Sbjct: 185 -KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 219

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 73/183 (39%), Gaps = 36/183 (19%)
Query: 412 KLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETSNS---------NATIG 462
           KLG G FG V+ A +    ++AVK +   S   +E F  E     +         +A + 
Sbjct: 22  KLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT 80
Query: 463 ANVKAFVREMKTF------------SDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLR 510
                 + E                S   L  L+ +  +      IA G+ ++ Q +   
Sbjct: 81  KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQ------IAEGMAFIEQRN--- 131
Query: 511 IIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSKPNEILK-----CINVGLLCV 565
            IHRDL+ +NIL+   +  KI+DFGLA  + D +  A       +K      IN G   +
Sbjct: 132 YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTI 191
Query: 566 QED 568
           + D
Sbjct: 192 KSD 194

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 22/156 (14%)
Query: 405 DNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRL-----SSASGQGLEEFKNEIETSNSN 458
           D+F + ++LG G  G V+K    P G  +A K +      +   Q + E +  +   NS 
Sbjct: 6   DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ-VLHECNSP 64
Query: 459 ATIGANVKAFVRE------MKTFSDPTLSALLHWEMRF------NIIIGIARGLLYLHQD 506
             +G    AF  +      M+     +L  +L    R        + I + +GL YL + 
Sbjct: 65  YIVGF-YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE- 122
Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD 542
            + +I+HRD+K SNIL++     K+ DFG++  ++D
Sbjct: 123 -KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 157

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score = 42.7 bits (99), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 22/150 (14%)
Query: 407 FSEANKLGKGGFGPVYKA-KFPGGQQIAVKRLSSASGQG-----------LEEFKNEIET 454
           +++   +G+G +G V  A       ++A+K++S    Q            L  F++E   
Sbjct: 45  YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVI 104
Query: 455 SNSNATIGANVKAF--VREMKTFSDPTLSALLHWEMRFN-----IIIGIARGLLYLHQDS 507
              +    + ++A   V  ++   +  L  LL  +   N      +  I RGL Y+H  +
Sbjct: 105 GIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYIHSAN 164
Query: 508 RLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
              ++HRDLK SN+L++   + KI DFGLA
Sbjct: 165 ---VLHRDLKPSNLLINTTCDLKICDFGLA 191

>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360

Iteration: 1
 Score = 42.7 bits (99), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 22/156 (14%)
Query: 405 DNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRL-----SSASGQGLEEFKNEIETSNSN 458
           D+F + ++LG G  G V+K    P G  +A K +      +   Q + E +  +   NS 
Sbjct: 33  DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQV-LHECNSP 91
Query: 459 ATIGANVKAFVRE------MKTFSDPTLSALLHWEMRF------NIIIGIARGLLYLHQD 506
             +G    AF  +      M+     +L  +L    R        + I + +GL YL + 
Sbjct: 92  YIVGF-YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE- 149
Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD 542
            + +I+HRD+K SNIL++     K+ DFG++  ++D
Sbjct: 150 -KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 184

>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333

Iteration: 1
 Score = 42.7 bits (99), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 22/156 (14%)
Query: 405 DNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRL-----SSASGQGLEEFKNEIETSNSN 458
           D+F + ++LG G  G V+K    P G  +A K +      +   Q + E +  +   NS 
Sbjct: 6   DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQV-LHECNSP 64
Query: 459 ATIGANVKAFVRE------MKTFSDPTLSALLHWEMRF------NIIIGIARGLLYLHQD 506
             +G    AF  +      M+     +L  +L    R        + I + +GL YL + 
Sbjct: 65  YIVGF-YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE- 122
Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD 542
            + +I+HRD+K SNIL++     K+ DFG++  ++D
Sbjct: 123 -KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 157

>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 42.7 bits (99), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 65/148 (43%), Gaps = 26/148 (17%)
Query: 413 LGKGGFGPVYKAKFP-----GGQQIAVKRLSSASG-QGLEEFKNEIETSNS--------- 457
           LG+G FG V   ++       G+Q+AVK L   SG   + + K EIE   +         
Sbjct: 29  LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 458 ----NATIGANVKAFVREMKTFSD----PTLSALLHWEMRFNIIIGIARGLLYLHQDSRL 509
                   G  +K  +  + + S     P     ++ + +    + I +G+ YL   SR 
Sbjct: 89  KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL--GSR- 145
Query: 510 RIIHRDLKTSNILLDQEMNPKISDFGLA 537
           + +HRDL   N+L++ E   KI DFGL 
Sbjct: 146 QYVHRDLAARNVLVESEHQVKIGDFGLT 173

>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290

Iteration: 1
 Score = 42.7 bits (99), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 65/148 (43%), Gaps = 26/148 (17%)
Query: 413 LGKGGFGPVYKAKFP-----GGQQIAVKRLSSASG-QGLEEFKNEIETSNS--------- 457
           LG+G FG V   ++       G+Q+AVK L   SG   + + K EIE   +         
Sbjct: 17  LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 458 ----NATIGANVKAFVREMKTFSD----PTLSALLHWEMRFNIIIGIARGLLYLHQDSRL 509
                   G  +K  +  + + S     P     ++ + +    + I +G+ YL   SR 
Sbjct: 77  KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL--GSR- 133
Query: 510 RIIHRDLKTSNILLDQEMNPKISDFGLA 537
           + +HRDL   N+L++ E   KI DFGL 
Sbjct: 134 QYVHRDLAARNVLVESEHQVKIGDFGLT 161

>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341

Iteration: 1
 Score = 42.7 bits (99), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 22/156 (14%)
Query: 405 DNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRL-----SSASGQGLEEFKNEIETSNSN 458
           D+F + ++LG G  G V+K    P G  +A K +      +   Q + E +  +   NS 
Sbjct: 6   DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQV-LHECNSP 64
Query: 459 ATIGANVKAFVRE------MKTFSDPTLSALLHWEMRF------NIIIGIARGLLYLHQD 506
             +G    AF  +      M+     +L  +L    R        + I + +GL YL + 
Sbjct: 65  YIVGF-YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE- 122
Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD 542
            + +I+HRD+K SNIL++     K+ DFG++  ++D
Sbjct: 123 -KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 157

>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542 Length = 309

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 75/164 (45%), Gaps = 30/164 (18%)
Query: 399 SILAATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETSNSN 458
           S +A T    E+  +GKG FG V++ K+ G +++AVK  SS   +    +  E E   + 
Sbjct: 5   STIARTIVLQES--IGKGRFGEVWRGKWRG-EEVAVKIFSSREERS---WFREAEIYQTV 58
Query: 459 ATIGANVKAFV----REMKTFSDPTL-------SALLHWEMRFNIII--------GIARG 499
                N+  F+    ++  T++   L        +L  +  R+ + +          A G
Sbjct: 59  MLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASG 118
Query: 500 LLYLHQD-----SRLRIIHRDLKTSNILLDQEMNPKISDFGLAL 538
           L +LH +      +  I HRDLK+ NIL+ +     I+D GLA+
Sbjct: 119 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 162

>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 22/156 (14%)
Query: 405 DNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRL-----SSASGQGLEEFKNEIETSNSN 458
           D+F + ++LG G  G V+K    P G  +A K +      +   Q + E +  +   NS 
Sbjct: 6   DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQV-LHECNSP 64
Query: 459 ATIGANVKAFVRE------MKTFSDPTLSALLHWEMRF------NIIIGIARGLLYLHQD 506
             +G    AF  +      M+     +L  +L    R        + I + +GL YL + 
Sbjct: 65  YIVGF-YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE- 122
Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD 542
            + +I+HRD+K SNIL++     K+ DFG++  ++D
Sbjct: 123 -KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 157

>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 22/156 (14%)
Query: 405 DNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRL-----SSASGQGLEEFKNEIETSNSN 458
           D+F + ++LG G  G V+K    P G  +A K +      +   Q + E +  +   NS 
Sbjct: 6   DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQV-LHECNSP 64
Query: 459 ATIGANVKAFVRE------MKTFSDPTLSALLHWEMRF------NIIIGIARGLLYLHQD 506
             +G    AF  +      M+     +L  +L    R        + I + +GL YL + 
Sbjct: 65  YIVGF-YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE- 122
Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD 542
            + +I+HRD+K SNIL++     K+ DFG++  ++D
Sbjct: 123 -KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 157

>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp Site Inhibitor Length = 301

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 69/150 (46%), Gaps = 28/150 (18%)
Query: 413 LGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVKAFV--- 469
           +GKG FG V++ K+ G +++AVK  SS   +    +  E E   +      N+  F+   
Sbjct: 12  IGKGRFGEVWRGKWRG-EEVAVKIFSSREERS---WFREAEIYQTVMLRHENILGFIAAD 67
Query: 470 -REMKTFSDPTL-------SALLHWEMRFNIII--------GIARGLLYLHQD-----SR 508
            ++  T++   L        +L  +  R+ + +          A GL +LH +      +
Sbjct: 68  NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGK 127
Query: 509 LRIIHRDLKTSNILLDQEMNPKISDFGLAL 538
             I HRDLK+ NIL+ +     I+D GLA+
Sbjct: 128 PAIAHRDLKSKNILVKKNGTCCIADLGLAV 157

>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine Receptor Tyrosine Kinase Tyro3 (Sky) Length = 323

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 46/191 (24%), Positives = 78/191 (40%), Gaps = 46/191 (24%)
Query: 379 SDQFKEEEKQGIDLPFIDFESILAATDNFSEANKLGKGGFGPVYKAKFPGGQ----QIAV 434
           SD+ KE+            E +L     F+    LGKG FG V +A+         ++AV
Sbjct: 8   SDELKEK-----------LEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAV 56
Query: 435 KRLSS--ASGQGLEEF------KNEIETSNSNATIGANVKAFVREMKTFSDPTLSALLHW 486
           K L +   +   +EEF        E +  +    +G ++++  +         L  + H 
Sbjct: 57  KMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHG 116
Query: 487 EMR------------FNI--------IIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQE 526
           ++             FN+        ++ IA G+ YL   S    IHRDL   N +L ++
Sbjct: 117 DLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYL---SSRNFIHRDLAARNCMLAED 173
Query: 527 MNPKISDFGLA 537
           M   ++DFGL+
Sbjct: 174 MTVCVADFGLS 184

>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human Tgf- Beta Type I Receptor Length = 303

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 69/150 (46%), Gaps = 28/150 (18%)
Query: 413 LGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVKAFV--- 469
           +GKG FG V++ K+ G +++AVK  SS   +    +  E E   +      N+  F+   
Sbjct: 11  IGKGRFGEVWRGKWRG-EEVAVKIFSSREERS---WFREAEIYQTVMLRHENILGFIAAD 66
Query: 470 -REMKTFSDPTL-------SALLHWEMRFNIII--------GIARGLLYLHQD-----SR 508
            ++  T++   L        +L  +  R+ + +          A GL +LH +      +
Sbjct: 67  NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGK 126
Query: 509 LRIIHRDLKTSNILLDQEMNPKISDFGLAL 538
             I HRDLK+ NIL+ +     I+D GLA+
Sbjct: 127 PAIAHRDLKSKNILVKKNGTCCIADLGLAV 156

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 66/163 (40%), Gaps = 39/163 (23%)
Query: 402 AATDNFSEANKLGKGGFGPVYKAK-FPGGQQIAVKRLSSASGQGLEE------------- 447
           A  D F     LG G FG V   K    G   A+K L       L+E             
Sbjct: 38  AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQA 97
Query: 448 ----FKNEIETS---NSNATI------GANVKAFVREMKTFSDPTLSALLHWEMRFNIII 494
               F  ++E S   NSN  +      G  + + +R +  FS+P          RF    
Sbjct: 98  VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP--------HARF-YAA 148
Query: 495 GIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            I     YLH    L +I+RDLK  N+++DQ+   +++DFGLA
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGLA 188

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 22/156 (14%)
Query: 405 DNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLS-----SASGQGLEEFKNEIETSNSN 458
           D+F + ++LG G  G V+K    P G  +A K +      +   Q + E +  +   NS 
Sbjct: 25  DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ-VLHECNSP 83
Query: 459 ATIGANVKAFVRE------MKTFSDPTLSALLHWEMRF------NIIIGIARGLLYLHQD 506
             +G    AF  +      M+     +L  +L    R        + I + +GL YL + 
Sbjct: 84  YIVGF-YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE- 141
Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD 542
            + +I+HRD+K SNIL++     K+ DFG++  ++D
Sbjct: 142 -KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 176

>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 37/161 (22%), Positives = 66/161 (40%), Gaps = 43/161 (26%)
Query: 405 DNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGAN 464
           + + + +KLG+G +  VYK K      +            L+E + E E       I   
Sbjct: 2   ETYIKLDKLGEGTYATVYKGKSKLTDNLV----------ALKEIRLEHEEGAPCTAIRE- 50
Query: 465 VKAFVREMKTFSDPTLSALLHWEMRFNIII----------------------------GI 496
             + ++++K  +  TL  ++H E    ++                              +
Sbjct: 51  -VSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQL 109
Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            RGL Y H   R +++HRDLK  N+L+++    K++DFGLA
Sbjct: 110 LRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLA 147

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	626
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	2e-55
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	8e-10
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	9e-49
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	1e-08
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	2e-48
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	2e-10
3soc_A	322	Activin receptor type-2A; structural genomics cons	2e-34
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	1e-31
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	5e-27
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	4e-26
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	2e-25
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	4e-25
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	6e-25
3q4u_A	301	Activin receptor type-1; structural genomics conso	8e-25
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	8e-25
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	1e-24
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	5e-24
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	1e-22
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	2e-22
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	4e-22
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	1e-21
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	9e-19
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	2e-18
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	7e-18
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	1e-17
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	2e-17
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	2e-17
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	4e-17
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	9e-17
3fme_A	290	Dual specificity mitogen-activated protein kinase;	1e-16
3an0_A	340	Dual specificity mitogen-activated protein kinase;	1e-16
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	1e-16
2a19_B	284	Interferon-induced, double-stranded RNA-activated	2e-16
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	2e-16
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	3e-16
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	3e-16
3aln_A	327	Dual specificity mitogen-activated protein kinase;	9e-16
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	2e-15
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	2e-15
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	2e-15
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	3e-15
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	4e-15
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	7e-15
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	7e-15
2dyl_A	318	Dual specificity mitogen-activated protein kinase	1e-14
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	1e-14
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	2e-14
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	2e-14
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	2e-14
4aoj_A	329	High affinity nerve growth factor receptor; transf	2e-14
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	2e-14
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	2e-14
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	2e-14
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	2e-14
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	2e-14
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	3e-14
3niz_A	311	Rhodanese family protein; structural genomics, str	3e-14
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	3e-14
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	4e-14
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	5e-14
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	5e-14
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	6e-14
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	7e-14
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	8e-14
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	8e-14
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	1e-13
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	1e-13
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	1e-13
3pls_A	298	Macrophage-stimulating protein receptor; protein k	2e-13
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	2e-13
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	2e-13
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	2e-13
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	2e-13
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	2e-13
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	2e-13
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	3e-13
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	3e-13
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	3e-13
3o0g_A	292	Cell division protein kinase 5; kinase activator c	4e-13
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	4e-13
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	5e-13
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	5e-13
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	6e-13
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	6e-13
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	7e-13
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	7e-13
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	7e-13
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	8e-13
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	9e-13
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	1e-12
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	1e-12
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	1e-12
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	1e-12
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	1e-12
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	2e-12
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	2e-12
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	2e-12
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	2e-12
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	3e-12
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	3e-12
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	4e-12
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	4e-12
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	4e-12
3rp9_A	458	Mitogen-activated protein kinase; structural genom	5e-12
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	5e-12
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	5e-12
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	5e-12
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	6e-12
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	6e-12
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	6e-12
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	7e-12
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	8e-12
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	8e-12
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	8e-12
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	8e-12
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	8e-12
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	8e-12
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	1e-11
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	1e-11
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	2e-11
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	2e-11
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	2e-11
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	2e-11
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	2e-11
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	2e-11
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	2e-11
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	2e-11
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	2e-11
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	2e-11
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	2e-11
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	3e-11
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	3e-11
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	3e-11
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	3e-11
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	4e-11
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	4e-11
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	4e-11
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	4e-11
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	4e-11
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	5e-11
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	6e-11
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	6e-11
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	6e-11
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	7e-11
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	9e-11
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	1e-10
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	1e-10
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	1e-10
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	2e-10
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	2e-10
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	2e-10
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	2e-10
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	3e-10
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	4e-10
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	6e-10
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	9e-10
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	1e-09
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	1e-09
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	1e-09
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	1e-09
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	2e-09
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	2e-09
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	2e-09
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	3e-09
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	3e-09
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	3e-09
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	4e-09
3ork_A	311	Serine/threonine protein kinase; structural genomi	4e-09
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	5e-09
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	5e-09
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	6e-09
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	6e-09
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	7e-09
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	1e-08
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	1e-08
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	1e-08
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	1e-08
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	2e-08
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	2e-08
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	2e-08
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	2e-08
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	2e-08
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	2e-08
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	3e-08
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	3e-08
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	4e-08
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	4e-08
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	5e-08
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	6e-08
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	6e-08
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	6e-08
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	7e-08
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	8e-08
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	8e-08
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	8e-08
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	9e-08
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	1e-07
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	1e-07
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	1e-07
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	1e-07
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	1e-07
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	1e-07
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	1e-07
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	1e-07
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	2e-07
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	2e-07
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	2e-07
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	5e-07
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	5e-07
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	6e-07
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	8e-07
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	8e-07
3bhy_A	283	Death-associated protein kinase 3; death associate	8e-07
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	8e-07
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	9e-07
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	9e-07
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	1e-06
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	1e-06
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	2e-06
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	2e-06
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	2e-06
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	2e-06
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	2e-06
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	2e-06
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	3e-06
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	6e-06
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	2e-05
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	2e-05
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	4e-05
3uqc_A	286	Probable conserved transmembrane protein; structur	2e-04
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	3e-04
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	3e-04
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	4e-04

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  190 bits (485), Expect = 2e-55
 Identities = 62/180 (34%), Positives = 80/180 (44%), Gaps = 37/180 (20%)

Query: 397 FESILAATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLE-EFKNEIETS 455
              +  A+DNFS  N LG+GGFG VYK +   G  +AVKRL     QG E +F+ E+E  
Sbjct: 22  LRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEM- 80

Query: 456 NSNATIGA----NVKAFVR-----------------------EMKTFSDPTLSALLHWEM 488
                I      N+   +R                              P     L W  
Sbjct: 81  -----ISMAVHRNL---LRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPK 132

Query: 489 RFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHAS 548
           R  I +G ARGL YLH     +IIHRD+K +NILLD+E    + DFGLA  M  +  H +
Sbjct: 133 RQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVT 192

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 59.9 bits (146), Expect = 8e-10
 Identities = 19/50 (38%), Positives = 28/50 (56%)

Query: 538 LDMMDQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAM 587
             ++D  L  + K  E+ + I V LLC Q  P +RP MS+VV ML  + +
Sbjct: 262 EALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGL 311

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score =  172 bits (437), Expect = 9e-49
 Identities = 61/188 (32%), Positives = 91/188 (48%), Gaps = 21/188 (11%)

Query: 368 SARHVKDMVVDSDQFKEEEKQGIDLPFIDFESILAATDNFSEANKLGKGGFGPVYKAKFP 427
            +++ K     +D          +   +    +  AT+NF     +G G FG VYK    
Sbjct: 2   GSKYSKATNSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLR 61

Query: 428 GGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIG----ANVKAFVRE-MKT-- 474
            G ++A+KR +  S QG+EEF+ EIET       +  + IG     N    + + M+   
Sbjct: 62  DGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGN 121

Query: 475 -----FSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNP 529
                +     +  + WE R  I IG ARGL YLH  +   IIHRD+K+ NILLD+   P
Sbjct: 122 LKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVP 178

Query: 530 KISDFGLA 537
           KI+DFG++
Sbjct: 179 KITDFGIS 186

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 56.1 bits (136), Expect = 1e-08
 Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 1/51 (1%)

Query: 539 DMMDQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNL 589
            ++D  L    +P  + K  +  + C+     DRP+M DV+  L   A+ L
Sbjct: 267 QIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL-EYALRL 316

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score =  170 bits (434), Expect = 2e-48
 Identities = 58/201 (28%), Positives = 84/201 (41%), Gaps = 44/201 (21%)

Query: 383 KEEEKQGIDLPFIDFESILAATDNFSE------ANKLGKGGFGPVYKAKFPGGQQIAVKR 436
           K  E          F  +   T+NF E       NK+G+GGFG VYK        +AVK+
Sbjct: 3   KSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKK 61

Query: 437 LSS----ASGQGLEEFKNEIETSNSNATIGA----N-VKAF-----------VRE-MKTF 475
           L++     + +  ++F  EI+       +      N V+             V   M   
Sbjct: 62  LAAMVDITTEELKQQFDQEIKV------MAKCQHENLVELLGFSSDGDDLCLVYVYMPNG 115

Query: 476 S------DPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNP 529
           S          +  L W MR  I  G A G+ +LH++     IHRD+K++NILLD+    
Sbjct: 116 SLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH---HIHRDIKSANILLDEAFTA 172

Query: 530 KISDFGLA-LDMMDQKLHASS 549
           KISDFGLA       +   +S
Sbjct: 173 KISDFGLARASEKFAQTVMTS 193

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 61.4 bits (150), Expect = 2e-10
 Identities = 11/54 (20%), Positives = 22/54 (40%), Gaps = 1/54 (1%)

Query: 529 PKISDFGLALDMMDQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIML 582
               +     D +D+K++ +     +    +V   C+ E  N RP +  V  +L
Sbjct: 249 EIEDEEKTIEDYIDKKMNDAD-STSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 301

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score =  132 bits (334), Expect = 2e-34
 Identities = 45/181 (24%), Positives = 73/181 (40%), Gaps = 26/181 (14%)

Query: 395 IDFESILAATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIET 454
           +  E++   +          +G FG V+KA+    + +AVK       Q   + + E+ +
Sbjct: 14  LGTENLYFQSMPLQLLEVKARGRFGCVWKAQLLN-EYVAVKIFPIQDKQS-WQNEYEVYS 71

Query: 455 ------SNSNATIGANVKAFVREMKTF------SDPTLSALLH-----WEMRFNIIIGIA 497
                  N    IGA  +    ++  +         +LS  L      W    +I   +A
Sbjct: 72  LPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIAETMA 131

Query: 498 RGLLYLHQD-------SRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSK 550
           RGL YLH+D        +  I HRD+K+ N+LL   +   I+DFGLAL     K    + 
Sbjct: 132 RGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTH 191

Query: 551 P 551
            
Sbjct: 192 G 192

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score =  124 bits (314), Expect = 1e-31
 Identities = 39/184 (21%), Positives = 62/184 (33%), Gaps = 30/184 (16%)

Query: 395 IDFESILAATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIET 454
                     DN      +G+G +G VYK      + +AVK  S A+ Q    F NE   
Sbjct: 3   AAASEPSLDLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQ---NFINEKNI 58

Query: 455 SNSNAT--------IGANVKAFVR------------EMKTFSDPTLSALLHWEMRFNIII 494
                         I  + +                   +           W     +  
Sbjct: 59  YRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAH 118

Query: 495 GIARGLLYLHQD------SRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHAS 548
            + RGL YLH +       +  I HRDL + N+L+  +    ISDFGL++ +   +L   
Sbjct: 119 SVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRP 178

Query: 549 SKPN 552
            + +
Sbjct: 179 GEED 182

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score =  110 bits (277), Expect = 5e-27
 Identities = 44/162 (27%), Positives = 66/162 (40%), Gaps = 32/162 (19%)

Query: 395 IDFESILAATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIET 454
           ID++ I            +G+G FG V KAK+   + +A+K++ S      + F  E+  
Sbjct: 5   IDYKEI-------EVEEVVGRGAFGVVCKAKW-RAKDVAIKQIES--ESERKAFIVELRQ 54

Query: 455 ------SNSNATIGANVKAF--VRE-MKTFSDPTLSALLH---------WEMRFNIIIGI 496
                  N     GA +     V E  +  S   L  +LH              +  +  
Sbjct: 55  LSRVNHPNIVKLYGACLNPVCLVMEYAEGGS---LYNVLHGAEPLPYYTAAHAMSWCLQC 111

Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMN-PKISDFGLA 537
           ++G+ YLH      +IHRDLK  N+LL       KI DFG A
Sbjct: 112 SQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA 153

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score =  108 bits (271), Expect = 4e-26
 Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 34/165 (20%)

Query: 395 IDFESILAATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRL--SSASGQGLEEFKNEI 452
           I +  +       +   K+G G FG V++A++  G  +AVK L       + + EF  E+
Sbjct: 34  IPWCDL-------NIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREV 85

Query: 453 E----TSNSNAT--IGANVK----AFVRE-MKTFSDPTLSALLH---------WEMRFNI 492
                  + N    +GA  +    + V E +   S   L  LLH            R ++
Sbjct: 86  AIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGS---LYRLLHKSGAREQLDERRRLSM 142

Query: 493 IIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
              +A+G+ YLH      I+HR+LK+ N+L+D++   K+ DFGL+
Sbjct: 143 AYDVAKGMNYLHN-RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLS 186

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score =  107 bits (268), Expect = 2e-25
 Identities = 54/227 (23%), Positives = 90/227 (39%), Gaps = 40/227 (17%)

Query: 359 PNMAAPFYESARHVKDMVVDSDQFKEEEKQGIDLPFIDFESILAATDNFSEANKLGKGGF 418
           P++  PF      +KD++ D          G  LP +   +I            +GKG F
Sbjct: 3   PSLDRPFISEGTTLKDLIYDM----TTSGSGSGLPLLVQRTIA---RTIVLQESIGKGRF 55

Query: 419 GPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVKAFV-REMKTFSD 477
           G V++ K+  G+++AVK  SS   +    +  E E   +      N+  F+  + K    
Sbjct: 56  GEVWRGKW-RGEEVAVKIFSS---REERSWFREAEIYQTVMLRHENILGFIAADNKDNGT 111

Query: 478 PT-------------LSALLH-----WEMRFNIIIGIARGLLYLHQD-----SRLRIIHR 514
            T             L   L+      E    + +  A GL +LH +      +  I HR
Sbjct: 112 WTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHR 171

Query: 515 DLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSKPNEILKCINVG 561
           DLK+ NIL+ +     I+D GLA+     +  +++   +I     VG
Sbjct: 172 DLKSKNILVKKNGTCCIADLGLAV-----RHDSATDTIDIAPNHRVG 213

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score =  105 bits (265), Expect = 4e-25
 Identities = 43/204 (21%), Positives = 76/204 (37%), Gaps = 35/204 (17%)

Query: 373 KDMVVDSDQFKEEEKQGIDLPFIDFESILAATDNFSEANKLGKGGFGPVYKAKFPGGQQI 432
           +D++  S    +    G  LP +   +I           ++GKG +G V+  K+  G+++
Sbjct: 12  RDLIEQS----QSSGSGSGLPLLVQRTIA---KQIQMVKQIGKGRYGEVWMGKW-RGEKV 63

Query: 433 AVKRLSSASGQGLEEFKNEIETSNSNAT--------IGANVKAFVREMKTF------SDP 478
           AVK   +        +  E E   +           I A++K      + +       + 
Sbjct: 64  AVKVFFT---TEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENG 120

Query: 479 TLSALLH-----WEMRFNIIIGIARGLLYLHQDSRLR-----IIHRDLKTSNILLDQEMN 528
           +L   L       +    +      GL +LH +         I HRDLK+ NIL+ +   
Sbjct: 121 SLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGT 180

Query: 529 PKISDFGLALDMMDQKLHASSKPN 552
             I+D GLA+  +         PN
Sbjct: 181 CCIADLGLAVKFISDTNEVDIPPN 204

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score =  104 bits (261), Expect = 6e-25
 Identities = 40/172 (23%), Positives = 68/172 (39%), Gaps = 40/172 (23%)

Query: 395 IDFESILAATDNFSEANKLGKGGFGPVYKAKFPG-GQQIAVKRLSSASGQG-------LE 446
           +    I           ++GKGGFG V+K +       +A+K L     +G        +
Sbjct: 16  LADNEI-------EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQ 68

Query: 447 EFKNEIETSNS----NAT--IGANVKAF--VRE-MKTFSDPTLSALLH-------WEMRF 490
           EF+ E+   ++    N     G        V E +       L   L        W ++ 
Sbjct: 69  EFQREVFIMSNLNHPNIVKLYGLMHNPPRMVMEFVPCGD---LYHRLLDKAHPIKWSVKL 125

Query: 491 NIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQ-----EMNPKISDFGLA 537
            +++ IA G+ Y+       I+HRDL++ NI L        +  K++DFGL+
Sbjct: 126 RLMLDIALGIEYMQN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS 176

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score =  104 bits (261), Expect = 8e-25
 Identities = 41/152 (26%), Positives = 65/152 (42%), Gaps = 28/152 (18%)

Query: 411 NKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVKAFV- 469
             +GKG +G V++  +  G+ +AVK  SS   +  + +  E E  N+      N+  F+ 
Sbjct: 14  ECVGKGRYGEVWRGSW-QGENVAVKIFSS---RDEKSWFRETELYNTVMLRHENILGFIA 69

Query: 470 REMKTFSDPT-------------LSALLH-----WEMRFNIIIGIARGLLYLHQDSRLR- 510
            +M +    T             L   L            I++ IA GL +LH +     
Sbjct: 70  SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQ 129

Query: 511 ----IIHRDLKTSNILLDQEMNPKISDFGLAL 538
               I HRDLK+ NIL+ +     I+D GLA+
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAV 161

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score =  102 bits (257), Expect = 1e-24
 Identities = 53/171 (30%), Positives = 79/171 (46%), Gaps = 39/171 (22%)

Query: 395 IDFESILAATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRL----SSASGQGLEEFKN 450
           IDF  +       +    +G GGFG VY+A +  G ++AVK           Q +E  + 
Sbjct: 4   IDFAEL-------TLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQ 55

Query: 451 EIET------SNSNATIGANVK----AFVRE-MKTFSDPTLSALLH-----WEMRFNIII 494
           E +        N  A  G  +K      V E  +      L+ +L       ++  N  +
Sbjct: 56  EAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGP---LNRVLSGKRIPPDILVNWAV 112

Query: 495 GIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNP--------KISDFGLA 537
            IARG+ YLH ++ + IIHRDLK+SNIL+ Q++          KI+DFGLA
Sbjct: 113 QIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA 163

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score =  101 bits (253), Expect = 5e-24
 Identities = 36/171 (21%), Positives = 63/171 (36%), Gaps = 35/171 (20%)

Query: 395 IDFESILAATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRL--SSASGQGLEEFKNEI 452
           IDF+ +       +   KL +   G ++K ++  G  I VK L     S +   +F  E 
Sbjct: 7   IDFKQL-------NFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEEC 58

Query: 453 ET----SNSNAT--IGANVK------AFVRE-MKTFSDPTLSALLH--------WEMRFN 491
                 S+ N    +GA           +   M   S   L  +LH              
Sbjct: 59  PRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGS---LYNVLHEGTNFVVDQSQAVK 115

Query: 492 IIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD 542
             + +ARG+ +LH    L I    L + ++++D++M  +IS   +      
Sbjct: 116 FALDMARGMAFLHTLEPL-IPRHALNSRSVMIDEDMTARISMADVKFSFQS 165

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 97.4 bits (243), Expect = 1e-22
 Identities = 54/162 (33%), Positives = 76/162 (46%), Gaps = 34/162 (20%)

Query: 395 IDFESILAATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRL--SSASGQGLEEFKNEI 452
           I    I       +   ++G G FG VYK K+ G   +AVK L  ++ + Q L+ FKNE+
Sbjct: 21  IPDGQI-------TVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEV 71

Query: 453 E----TSNSNAT--IGANVK---AFVRE-MKTFSDPTLSALLH-------WEMRFNIIIG 495
                T + N    +G +     A V +  +  S   L   LH        +   +I   
Sbjct: 72  GVLRKTRHVNILLFMGYSTAPQLAIVTQWCEGSS---LYHHLHASETKFEMKKLIDIARQ 128

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            ARG+ YLH      IIHRDLK++NI L ++   KI DFGLA
Sbjct: 129 TARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLA 167

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 97.4 bits (243), Expect = 2e-22
 Identities = 41/163 (25%), Positives = 68/163 (41%), Gaps = 36/163 (22%)

Query: 395 IDFESILAATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRL--SSASGQGLEEFKNEI 452
           I FE +            +GKG FG VY  ++ G  ++A++ +     +   L+ FK E+
Sbjct: 30  IPFEQL-------EIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREV 80

Query: 453 E----TSNSNAT--IGANVK----AFVRE-MKTFSDPTLSALLH-------WEMRFNIII 494
                T + N    +GA +     A +    K  +   L +++              I  
Sbjct: 81  MAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRT---LYSVVRDAKIVLDVNKTRQIAQ 137

Query: 495 GIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            I +G+ YLH      I+H+DLK+ N+  D      I+DFGL 
Sbjct: 138 EIVKGMGYLHA---KGILHKDLKSKNVFYD-NGKVVITDFGLF 176

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 96.6 bits (241), Expect = 4e-22
 Identities = 39/160 (24%), Positives = 55/160 (34%), Gaps = 53/160 (33%)

Query: 411 NKLGKGGFGPVYKAKFPG-GQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVKAFV 469
             LGKG FG   K      G+ + +K L     +    F  E                 V
Sbjct: 16  EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKE-----------------V 58

Query: 470 REMKTFSDP-------------------------TLSALLH-------WEMRFNIIIGIA 497
           + M+    P                         TL  ++        W  R +    IA
Sbjct: 59  KVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIA 118

Query: 498 RGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            G+ YLH    + IIHRDL + N L+ +  N  ++DFGLA
Sbjct: 119 SGMAYLHS---MNIIHRDLNSHNCLVRENKNVVVADFGLA 155

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 86.6 bits (215), Expect = 9e-19
 Identities = 35/164 (21%), Positives = 56/164 (34%), Gaps = 44/164 (26%)

Query: 406 NFSEANKLGKGGFGPVYKAK-FPGGQQIAVKRLSSASGQGLEEFKNEIE----------- 453
           ++    KLG+GGF  V   +    G   A+KR+     Q  EE + E +           
Sbjct: 30  HYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNIL 89

Query: 454 --------TSNSNATI--------GANVKAFVREMKT----FSDPTLSALLHWEMRFNII 493
                      +               +   +  +K      ++  +           ++
Sbjct: 90  RLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQI---------LWLL 140

Query: 494 IGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           +GI RGL  +H        HRDLK +NILL  E  P + D G  
Sbjct: 141 LGICRGLEAIHA---KGYAHRDLKPTNILLGDEGQPVLMDLGSM 181

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 85.1 bits (211), Expect = 2e-18
 Identities = 33/160 (20%), Positives = 56/160 (35%), Gaps = 35/160 (21%)

Query: 411 NKLGKGGFGPVYKAKFPGGQQIAVKR--LSSASGQGLEEFKNEIET----SNSNATIGAN 464
            ++G GG   V++      Q  A+K   L  A  Q L+ ++NEI         +  I   
Sbjct: 34  KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKI--- 90

Query: 465 VKAFVREMKTFSDPT------------LSALLHWEMRFN------IIIGIARGLLYLHQD 506
               +R                     L++ L  +   +          +   +  +HQ 
Sbjct: 91  ----IRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ- 145

Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLH 546
               I+H DLK +N L+  +   K+ DFG+A  M      
Sbjct: 146 --HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 182

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 84.4 bits (209), Expect = 7e-18
 Identities = 33/158 (20%), Positives = 56/158 (35%), Gaps = 35/158 (22%)

Query: 411 NKLGKGGFGPVYKAKFPGGQQIAVKR--LSSASGQGLEEFKNEIET----SNSNATIGAN 464
            ++G GG   V++      Q  A+K   L  A  Q L+ ++NEI         +  I   
Sbjct: 15  KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKI--- 71

Query: 465 VKAFVREMKTFSDPT------------LSALLHWEMRFN------IIIGIARGLLYLHQD 506
               +R                     L++ L  +   +          +   +  +HQ 
Sbjct: 72  ----IRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ- 126

Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQK 544
               I+H DLK +N L+  +   K+ DFG+A  M    
Sbjct: 127 --HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 161

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 83.2 bits (206), Expect = 1e-17
 Identities = 40/171 (23%), Positives = 56/171 (32%), Gaps = 49/171 (28%)

Query: 404 TDNFSEANKLGKGGFGPVYKAK-FPGGQQIAVKRLSSASGQGLEEFKNEI---------- 452
             +F E   LG+G FG V KA+     +  A+K++     + L    +E+          
Sbjct: 5   ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEK-LSTILSEVMLLASLNHQY 63

Query: 453 ---------ETSNSNATIGANVKA-----------------FVREMKTFSDPTLSALLHW 486
                    E  N    + A  K                   +                 
Sbjct: 64  VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYW---- 119

Query: 487 EMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
                +   I   L Y+H      IIHRDLK  NI +D+  N KI DFGLA
Sbjct: 120 ----RLFRQILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLA 163

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 83.7 bits (207), Expect = 2e-17
 Identities = 33/158 (20%), Positives = 56/158 (35%), Gaps = 35/158 (22%)

Query: 411 NKLGKGGFGPVYKAKFPGGQQIAVKR--LSSASGQGLEEFKNEIET----SNSNATIGAN 464
            ++G GG   V++      Q  A+K   L  A  Q L+ ++NEI         +  I   
Sbjct: 62  KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKI--- 118

Query: 465 VKAFVREMKTFSDPT------------LSALLHWEMRFN------IIIGIARGLLYLHQD 506
               +R                     L++ L  +   +          +   +  +HQ 
Sbjct: 119 ----IRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ- 173

Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQK 544
               I+H DLK +N L+  +   K+ DFG+A  M    
Sbjct: 174 --HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 208

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 81.9 bits (203), Expect = 2e-17
 Identities = 39/163 (23%), Positives = 61/163 (37%), Gaps = 41/163 (25%)

Query: 413 LGKGGFGPVYKAK-FPGGQQIAVKRL--SSASGQGLEE-FKNEIET-------------- 454
           LGKGGF   ++       +  A K +  S        E    EI                
Sbjct: 23  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82

Query: 455 ---SNSNATI------GANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQ 505
               N    +        ++    +  K  ++P        E R+  +  I  G  YLH 
Sbjct: 83  FFEDNDFVFVVLELCRRRSLLELHKRRKALTEP--------EARY-YLRQIVLGCQYLH- 132

Query: 506 DSRLRIIHRDLKTSNILLDQEMNPKISDFGLA--LDMMDQKLH 546
             R R+IHRDLK  N+ L++++  KI DFGLA  ++   ++  
Sbjct: 133 --RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKK 173

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 82.0 bits (203), Expect = 4e-17
 Identities = 38/163 (23%), Positives = 60/163 (36%), Gaps = 41/163 (25%)

Query: 413 LGKGGFGPVYKAK-FPGGQQIAVKRL--SSASGQGLEE-FKNEIET-------------- 454
           LGKGGF   ++       +  A K +  S        E    EI                
Sbjct: 49  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108

Query: 455 ---SNSNATI------GANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQ 505
               N    +        ++    +  K  ++P        E R+  +  I  G  YLH+
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEP--------EARY-YLRQIVLGCQYLHR 159

Query: 506 DSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMM--DQKLH 546
               R+IHRDLK  N+ L++++  KI DFGLA  +    ++  
Sbjct: 160 ---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKK 199

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 81.0 bits (200), Expect = 9e-17
 Identities = 38/166 (22%), Positives = 59/166 (35%), Gaps = 29/166 (17%)

Query: 412 KLGKGGFGPVYKAKFPG-GQQIAVKRLSSASGQGLEEFKNEIE----------------- 453
            L +GGF  VY+A+  G G++ A+KRL S   +       E+                  
Sbjct: 35  VLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSA 94

Query: 454 TSNSNATIGANVKAFVREMKTFSDPTLSALLHWEM---RF------NIIIGIARGLLYLH 504
            S            F+   +      L   L                I     R + ++H
Sbjct: 95  ASIGKEESDTGQAEFLLLTE-LCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH 153

Query: 505 QDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSK 550
           +  +  IIHRDLK  N+LL  +   K+ DFG A  +     ++ S 
Sbjct: 154 R-QKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSA 198

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 79.6 bits (197), Expect = 1e-16
 Identities = 43/157 (27%), Positives = 72/157 (45%), Gaps = 30/157 (19%)

Query: 405 DNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRL-SSASGQGLEEFKNEIE----TSNSN 458
           D+     +LG+G +G V K +  P GQ +AVKR+ ++ + Q  +    +++    T +  
Sbjct: 7   DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCP 66

Query: 459 ATIGANVK---AFVRE---------MKTFSDPTLSALLHWEMRFN------IIIGIARGL 500
            T    V    A  RE         M T  D     ++             I + I + L
Sbjct: 67  FT----VTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKAL 122

Query: 501 LYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            +LH  S+L +IHRD+K SN+L++     K+ DFG++
Sbjct: 123 EHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGIS 157

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 79.7 bits (197), Expect = 1e-16
 Identities = 43/197 (21%), Positives = 69/197 (35%), Gaps = 49/197 (24%)

Query: 405 DNFSEANKLGKGGFGPVYKAK-FPGGQQIAVKRLS-SASGQGLEEFKNEIET-------- 454
            +F     LG+GGFG V++AK        A+KR+         E+   E++         
Sbjct: 5   TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 64

Query: 455 -------------------SNSNATI--------GANVKAFVREMKTFSDPTLSALLHWE 487
                              S+    +          N+K ++    T  +   S  LH  
Sbjct: 65  IVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHI- 123

Query: 488 MRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM---MDQK 544
                 + IA  + +LH      ++HRDLK SNI    +   K+ DFGL   M    +++
Sbjct: 124 -----FLQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQ 175

Query: 545 LHASSKPNEILKCINVG 561
              +  P        VG
Sbjct: 176 TVLTPMPAYARHTGQVG 192

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 79.3 bits (196), Expect = 2e-16
 Identities = 40/187 (21%), Positives = 67/187 (35%), Gaps = 38/187 (20%)

Query: 405 DNFSEANKLGKGGFGPVYKAK-FPGGQQIAVKRLSSASGQGLEE--------------FK 449
            +F E   +G GGFG V+KAK    G+   +KR+   + +   E              + 
Sbjct: 11  MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYN 70

Query: 450 NEIETSNSNATIGANVKAFVREMKTF------SDPTLSALLHW--------EMRFNIIIG 495
              +  + +    +   +  +    F         TL   +           +   +   
Sbjct: 71  GCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQ 130

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSK--PN- 552
           I +G+ Y+H     ++I+RDLK SNI L      KI DFGL   + +      SK     
Sbjct: 131 ITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRY 187

Query: 553 ---EILK 556
              E + 
Sbjct: 188 MSPEQIS 194

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 78.7 bits (195), Expect = 2e-16
 Identities = 47/164 (28%), Positives = 72/164 (43%), Gaps = 42/164 (25%)

Query: 413 LGKGGFGPVYKAK-FPGGQQIAVKRL--SSASGQGLEE-FKNEIET-------------- 454
           LGKG F  VY+A+    G ++A+K +   +    G+ +  +NE++               
Sbjct: 19  LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYN 78

Query: 455 ---SNSN-------ATIGANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLH 504
               ++           G   +     +K FS+         E R   +  I  G+LYLH
Sbjct: 79  YFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSEN--------EARH-FMHQIITGMLYLH 129

Query: 505 QDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA--LDMMDQKLH 546
                 I+HRDL  SN+LL + MN KI+DFGLA  L M  +K +
Sbjct: 130 ---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHY 170

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 79.3 bits (196), Expect = 3e-16
 Identities = 33/176 (18%), Positives = 61/176 (34%), Gaps = 43/176 (24%)

Query: 405 DNFSEANKLGKGGFGPVYKAK-FPGGQQIAVKRL---SSASGQGLEEFKNEI-------- 452
            NF    K+G+G F  VY+A     G  +A+K++        +   +   EI        
Sbjct: 32  ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH 91

Query: 453 ----------ETSNS---------NATIGANVKAFVREMKTFSDPTLSALLHWEMRFNII 493
                        N             +   +K F ++ +   + T+     W       
Sbjct: 92  PNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTV-----W----KYF 142

Query: 494 IGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASS 549
           + +   L ++H     R++HRD+K +N+ +      K+ D GL      +   A S
Sbjct: 143 VQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS 195

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 78.9 bits (195), Expect = 3e-16
 Identities = 41/196 (20%), Positives = 74/196 (37%), Gaps = 25/196 (12%)

Query: 364 PFYESARHVKDMVVDSDQFKEEEKQGIDLPFIDFESILAATDNFSEANKLGKGGFGPVYK 423
            +++S   ++   V       E  Q         ES      +F   ++LG G +G V+K
Sbjct: 18  LYFQSMHQLQPRRVSFRGEASETLQSPGYDPSRPESFF--QQSFQRLSRLGHGSYGEVFK 75

Query: 424 AKFPG-GQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGAN---VK---AFVREMKT-- 474
            +    G+  AVKR  S   +G ++   ++    S+  +G +   V+   A+        
Sbjct: 76  VRSKEDGRLYAVKRSMSPF-RGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYL 134

Query: 475 ---FSDPTLSALL-HWEMRF------NIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLD 524
                 P+L      W            +      L +LH      ++H D+K +NI L 
Sbjct: 135 QTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHS---QGLVHLDVKPANIFLG 191

Query: 525 QEMNPKISDFGLALDM 540
                K+ DFGL +++
Sbjct: 192 PRGRCKLGDFGLLVEL 207

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 77.7 bits (192), Expect = 9e-16
 Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 23/152 (15%)

Query: 405 DNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRL-SSASGQGLEEFKNEIETSNSNATIG 462
           ++  +  ++G+G +G V K    P GQ +AVKR+ S+   +  ++   +++    ++   
Sbjct: 22  EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCP 81

Query: 463 ANVK---AFVRE---------MKTFSDPTLSALLHW-EMRFN------IIIGIARGLLYL 503
             V+   A  RE         M T  D     +    +          I +   + L +L
Sbjct: 82  YIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHL 141

Query: 504 HQDSRLRIIHRDLKTSNILLDQEMNPKISDFG 535
                L+IIHRD+K SNILLD+  N K+ DFG
Sbjct: 142 K--ENLKIIHRDIKPSNILLDRSGNIKLCDFG 171

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 77.5 bits (191), Expect = 2e-15
 Identities = 31/177 (17%), Positives = 59/177 (33%), Gaps = 48/177 (27%)

Query: 412 KLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVKAFVRE 471
            L +G F  +   +    +  A+K+   +  +   +F        S  +   + K    E
Sbjct: 38  TLNQGKFNKIILCE-KDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFK---NE 93

Query: 472 ---MK------------TFSDPT-------------LSALLHWEMRFN------------ 491
              +               ++               +     +    +            
Sbjct: 94  LQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVI 153

Query: 492 --IIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLH 546
             II  +     Y+H  +   I HRD+K SNIL+D+    K+SDFG +  M+D+K+ 
Sbjct: 154 KCIIKSVLNSFSYIH--NEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIK 208

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 76.1 bits (188), Expect = 2e-15
 Identities = 43/167 (25%), Positives = 68/167 (40%), Gaps = 35/167 (20%)

Query: 405 DNFSEANKLGKGGFGPVYKAK-FPGGQQIAVKRL--SSASGQGLEE-FKNEIETSNSNAT 460
           ++F     LGKG FG VY A+       +A+K L  +     G+E   + E+E       
Sbjct: 9   EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE------- 61

Query: 461 IGANVK--AFVREMKTFSDPT-------------LSALLHWEMRFN------IIIGIARG 499
           I ++++    +R    F D T             +   L    +F+       I  +A  
Sbjct: 62  IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 121

Query: 500 LLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLH 546
           L Y H     R+IHRD+K  N+LL      KI+DFG ++     +  
Sbjct: 122 LSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 165

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 77.1 bits (190), Expect = 2e-15
 Identities = 47/243 (19%), Positives = 87/243 (35%), Gaps = 53/243 (21%)

Query: 343 YTRRKRINSQGRSINRPNMAAPFYESARHVKDMVVDSDQ-----FKEEEKQGIDLPFIDF 397
           + RR+   + G  + R +       S   +   +          F+      IDL  ++ 
Sbjct: 14  HGRRRASVAAGILVPRGSPGLDGICSIEELSTSLYKKAGSENLYFQGANTVHIDLSALNP 73

Query: 398 ESILAATDNFSEANK--------LGKGGFGPVYKAKFPGG----QQIAVKRL-SSASGQG 444
           E + A        +         +G+G FG VY              AVK L        
Sbjct: 74  ELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE 133

Query: 445 LEEFKNEIE-----------------TSNSNATI-------GANVKAFVREMKTFSDPTL 480
           + +F  E                     +  + +         +++ F+R      +PT+
Sbjct: 134 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNET--HNPTV 191

Query: 481 SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM 540
             L+         + +A+G+ +L   +  + +HRDL   N +LD++   K++DFGLA DM
Sbjct: 192 KDLIG------FGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM 242

Query: 541 MDQ 543
            D+
Sbjct: 243 YDK 245

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 77.0 bits (189), Expect = 3e-15
 Identities = 23/181 (12%), Positives = 44/181 (24%), Gaps = 54/181 (29%)

Query: 413 LGKGGFGPVYKAKFPG-GQQIAVKRLSS---ASGQGLEEFKNEIET-------------- 454
           LG+       +A     G+   V             +++ K E+                
Sbjct: 86  LGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAK 145

Query: 455 ------SNSNATIGANVKAFVREMKTFSDP---------------------------TLS 481
                    +       K  +R      D                            +  
Sbjct: 146 VHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTH 205

Query: 482 ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMM 541
             L    R  + + + R L  LH      ++H  L+  +I+LDQ     ++ F   +   
Sbjct: 206 KSLVHHARLQLTLQVIRLLASLH---HYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDG 262

Query: 542 D 542
            
Sbjct: 263 A 263

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 76.4 bits (188), Expect = 4e-15
 Identities = 45/183 (24%), Positives = 74/183 (40%), Gaps = 42/183 (22%)

Query: 378 DSDQFKEEEKQGIDLPFIDFESILAATDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKR 436
             + F  ++++  +L   DFE I          ++LG G  G V+K    P G  +A K 
Sbjct: 16  RLEAFLTQKQKVGELKDDDFEKI----------SELGAGNGGVVFKVSHKPSGLVMARKL 65

Query: 437 LS-SASGQGLEEFKNEIE---TSNSNATI---GANVKAFVRE---------MKTFSDPTL 480
           +          +   E++     NS   +   G    AF  +         M   S   L
Sbjct: 66  IHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG----AFYSDGEISICMEHMDGGS---L 118

Query: 481 SALLHWEMRFN------IIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDF 534
             +L    R        + I + +GL YL    + +I+HRD+K SNIL++     K+ DF
Sbjct: 119 DQVLKKAGRIPEQILGKVSIAVIKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDF 176

Query: 535 GLA 537
           G++
Sbjct: 177 GVS 179

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 74.7 bits (184), Expect = 7e-15
 Identities = 36/149 (24%), Positives = 70/149 (46%), Gaps = 19/149 (12%)

Query: 404 TDNFSEANKLGKGGFGPVYKAKFPG-GQQIAVKRLSSASGQGLEEFKNEIET--SNSNAT 460
              ++   K+G+G  G VY A     GQ++A+++++       E   NEI     N N  
Sbjct: 19  KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78

Query: 461 IGANVKAFVRE------MKTFSDPTLSALLHWEMRFN------IIIGIARGLLYLHQDSR 508
           I   + +++        M+  +  +L+ ++  E   +      +     + L +LH +  
Sbjct: 79  IVNYLDSYLVGDELWVVMEYLAGGSLTDVVT-ETCMDEGQIAAVCRECLQALEFLHSN-- 135

Query: 509 LRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            ++IHRD+K+ NILL  + + K++DFG  
Sbjct: 136 -QVIHRDIKSDNILLGMDGSVKLTDFGFC 163

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 75.1 bits (185), Expect = 7e-15
 Identities = 37/149 (24%), Positives = 64/149 (42%), Gaps = 19/149 (12%)

Query: 404 TDNFSEANKLGKGGFGPVYKAKFPG-GQQIAVKRLSSASGQGLEEFKNEIET--SNSNAT 460
                   K+G+G  G V  A+    G+Q+AVK +     Q  E   NE+       +  
Sbjct: 44  RLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFN 103

Query: 461 IGANVKAFVRE------MKTFSDPTLSALLHWEMRFN------IIIGIARGLLYLHQDSR 508
           +    K+++        M+      L+ ++  ++R N      +   + + L YLH    
Sbjct: 104 VVEMYKSYLVGEELWVLMEFLQGGALTDIVS-QVRLNEEQIATVCEAVLQALAYLHAQ-- 160

Query: 509 LRIIHRDLKTSNILLDQEMNPKISDFGLA 537
             +IHRD+K+ +ILL  +   K+SDFG  
Sbjct: 161 -GVIHRDIKSDSILLTLDGRVKLSDFGFC 188

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 74.7 bits (184), Expect = 1e-14
 Identities = 39/172 (22%), Positives = 72/172 (41%), Gaps = 31/172 (18%)

Query: 394 FIDFESILAATDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRL-SSASGQGLEEFKNE 451
            I  +   A  ++     ++G G  G V+K +F   G  IAVK++  S + +  +    +
Sbjct: 14  TIGGQRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMD 73

Query: 452 IETSNSNAT---IGANVK---AFVRE---------MKTFSDPTLSALLHWEMRFN----- 491
           ++    +     I   V+    F+           M T ++         +         
Sbjct: 74  LDVVLKSHDCPYI---VQCFGTFITNTDVFIAMELMGTCAE---KLKKRMQGPIPERILG 127

Query: 492 -IIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD 542
            + + I + L YL    +  +IHRD+K SNILLD+    K+ DFG++  ++D
Sbjct: 128 KMTVAIVKALYYLK--EKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVD 177

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 73.8 bits (182), Expect = 1e-14
 Identities = 29/179 (16%), Positives = 62/179 (34%), Gaps = 43/179 (24%)

Query: 405 DNFSEANKLGKGGFGPVYKAK-FPGGQQIAVK--RLSSASGQGLEEFKNEI--------- 452
           +++     +G G +G   K +    G+ +  K     S +    +   +E+         
Sbjct: 6   EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65

Query: 453 -----------ETSNS---------NATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI 492
                       T+ +            + + +    +E +   +  +           +
Sbjct: 66  NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFV-----L----RV 116

Query: 493 IIGIARGLLYLHQ--DSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASS 549
           +  +   L   H+  D    ++HRDLK +N+ LD + N K+ DFGLA  +      A +
Sbjct: 117 MTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKT 175

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 74.0 bits (182), Expect = 2e-14
 Identities = 46/172 (26%), Positives = 69/172 (40%), Gaps = 38/172 (22%)

Query: 395 IDFESILAATDNFSEANKLGKGGFGPVYKAK-FPGGQQIAVKRLSSASGQGLEEFKNEI- 452
           ID  ++      F     +G G +G VYK +    GQ  A+K +   +G   EE K EI 
Sbjct: 14  IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMD-VTGDEEEEIKQEIN 72

Query: 453 ---ETSNSNATIGANV----KAFVREMKTFSDPTL----------SAL----LHWEMRFN 491
              + S+       N+     AF+++     D  L          S              
Sbjct: 73  MLKKYSHH-----RNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLK 127

Query: 492 ------IIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
                 I   I RGL +LHQ    ++IHRD+K  N+LL +    K+ DFG++
Sbjct: 128 EEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVS 176

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 73.5 bits (181), Expect = 2e-14
 Identities = 36/157 (22%), Positives = 54/157 (34%), Gaps = 41/157 (26%)

Query: 412 KLGKGGFGPVYKAK-FPGGQQIAVK--RLSSASGQGLEEFKNEIE--------------- 453
           ++G+G F  VYK        ++A    +    +    + FK E E               
Sbjct: 33  EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYD 92

Query: 454 ----TSNSNATI--------GANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLL 501
               T      I           +K +++  K      L          +    I +GL 
Sbjct: 93  SWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLR---------SWCRQILKGLQ 143

Query: 502 YLHQDSRLRIIHRDLKTSNILLDQEM-NPKISDFGLA 537
           +LH  +   IIHRDLK  NI +     + KI D GLA
Sbjct: 144 FLHTRTP-PIIHRDLKCDNIFITGPTGSVKIGDLGLA 179

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 73.9 bits (182), Expect = 2e-14
 Identities = 37/170 (21%), Positives = 64/170 (37%), Gaps = 46/170 (27%)

Query: 411 NKLGKGGFGPVYKAKFPGG----QQIAVKRL--SSASGQGLEEFKNEIE----------- 453
             LG+G FG V +           ++AVK +   ++S + +EEF +E             
Sbjct: 40  KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99

Query: 454 ------TSNSNATIGA-----------NVKAFVREMKTFSDP---TLSALLHWEMRFNII 493
                    S+  I             ++  ++   +  + P    L  LL        +
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLK------FM 153

Query: 494 IGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQ 543
           + IA G+ YL   S    +HRDL   N +L  +M   ++DFGL+  +   
Sbjct: 154 VDIALGMEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSG 200

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 73.9 bits (182), Expect = 2e-14
 Identities = 39/168 (23%), Positives = 65/168 (38%), Gaps = 38/168 (22%)

Query: 411 NKLGKGGFGPVYKAKFPGG------QQIAVKRLSSASGQGLEEFKNEIE----------- 453
            +LG+G FG V+ A+            +AVK L  AS    ++F+ E E           
Sbjct: 47  WELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIV 106

Query: 454 ------TSNSNATI------GANVKAFVR------EMKTFSDPTLSALLHWEMRFNIIIG 495
                 T      +        ++  F+R      ++    +      L       +   
Sbjct: 107 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 166

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQ 543
           +A G++YL   + L  +HRDL T N L+ Q +  KI DFG++ D+   
Sbjct: 167 VAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYST 211

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 73.9 bits (182), Expect = 2e-14
 Identities = 41/165 (24%), Positives = 62/165 (37%), Gaps = 44/165 (26%)

Query: 411 NKLGKGGFGPVYKAKFPG-----GQQIAVKRL-SSASGQGLEEFKNEIE----------- 453
             LG+G FG V    +       G+ +AVK L + A  Q    +K EI+           
Sbjct: 37  RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHII 96

Query: 454 ------TSNSNATI--------GANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARG 499
                      A++          +++ ++          L+ LL +         I  G
Sbjct: 97  KYKGCCEDAGAASLQLVMEYVPLGSLRDYLPR----HSIGLAQLLLF------AQQICEG 146

Query: 500 LLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQK 544
           + YLH       IHRDL   N+LLD +   KI DFGLA  + +  
Sbjct: 147 MAYLHA---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGH 188

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 73.1 bits (180), Expect = 2e-14
 Identities = 43/164 (26%), Positives = 68/164 (41%), Gaps = 41/164 (25%)

Query: 411 NKLGKGGFGPVYKAKFPG-----GQQIAVKRLSSASGQGLEEFKNEIE------------ 453
            +LGKG FG V   ++       G+ +AVK+L  ++ + L +F+ EIE            
Sbjct: 16  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75

Query: 454 -----TSNSNATI--------GANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGL 500
                 S     +          +++ ++++ K         LL +         I +G+
Sbjct: 76  YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQY------TSQICKGM 127

Query: 501 LYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQK 544
            YL      R IHRDL T NIL++ E   KI DFGL   +   K
Sbjct: 128 EYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 168

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 73.0 bits (180), Expect = 2e-14
 Identities = 44/167 (26%), Positives = 69/167 (41%), Gaps = 35/167 (20%)

Query: 405 DNFSEANKLGKGGFGPVYKAK-FPGGQQIAVKRL--SSASGQGLEE-FKNEIETSNSNAT 460
           D+F     LGKG FG VY A+       +A+K L  S    +G+E   + EIE       
Sbjct: 14  DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIE------- 66

Query: 461 IGANVK-AFVREMK-TFSDPT-------------LSALLHWEMRFN------IIIGIARG 499
           I ++++   +  M   F D               L   L    RF+       +  +A  
Sbjct: 67  IQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADA 126

Query: 500 LLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLH 546
           L Y H     ++IHRD+K  N+L+  +   KI+DFG ++     +  
Sbjct: 127 LHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRR 170

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 73.6 bits (181), Expect = 2e-14
 Identities = 43/164 (26%), Positives = 68/164 (41%), Gaps = 41/164 (25%)

Query: 411 NKLGKGGFGPVYKAKFPG-----GQQIAVKRLSSASGQGLEEFKNEIE------------ 453
            +LGKG FG V   ++       G+ +AVK+L  ++ + L +F+ EIE            
Sbjct: 47  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 106

Query: 454 -----TSNSNATI--------GANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGL 500
                 S     +          +++ ++++ K         LL +         I +G+
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQY------TSQICKGM 158

Query: 501 LYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQK 544
            YL      R IHRDL T NIL++ E   KI DFGL   +   K
Sbjct: 159 EYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 199

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 73.1 bits (180), Expect = 2e-14
 Identities = 40/162 (24%), Positives = 67/162 (41%), Gaps = 40/162 (24%)

Query: 411 NKLGKGGFGPVYKA--KFPGGQQI--AVKRL-SSASGQGLEEFKNEIET----------- 454
             +G+G FG VY        G++I  AVK L        + +F  E              
Sbjct: 31  EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 90

Query: 455 -----SNSNATI--------GANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLL 501
                  S  +           +++ F+R      +PT+  L+         + +A+G+ 
Sbjct: 91  LLGICLRSEGSPLVVLPYMKHGDLRNFIRNET--HNPTVKDLIG------FGLQVAKGMK 142

Query: 502 YLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQ 543
           YL   +  + +HRDL   N +LD++   K++DFGLA DM D+
Sbjct: 143 YL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 181

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 73.6 bits (181), Expect = 3e-14
 Identities = 35/173 (20%), Positives = 66/173 (38%), Gaps = 40/173 (23%)

Query: 405 DNFSEANKLGKGGFGPVYKAK-FPGGQQIAVK--RLSSASGQGLEEFKNEIE-------- 453
           + +    K+G+G FG     K    G+Q  +K   +S  S +  EE + E+         
Sbjct: 24  EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHP 83

Query: 454 ---------TSNSNATI------GANVKAFVREMK--TFSDPTLSALLHWEMRFNIIIGI 496
                      N +  I      G ++   +   K   F +  +          +  + I
Sbjct: 84  NIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQI---------LDWFVQI 134

Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASS 549
              L ++H     +I+HRD+K+ NI L ++   ++ DFG+A  +      A +
Sbjct: 135 CLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARA 184

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 73.0 bits (180), Expect = 3e-14
 Identities = 43/167 (25%), Positives = 71/167 (42%), Gaps = 55/167 (32%)

Query: 405 DNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGAN 464
           + + +  K+G+G +G VYKAK   G+ +A+KR+       L+               G  
Sbjct: 21  EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIR------LDAEDE-----------GIP 63

Query: 465 VKAFVRE---MKTFSDP---TLSALLHWEMRFNII----------------IGIA----- 497
             A +RE   +K    P   +L  ++H E    ++                 G+      
Sbjct: 64  STA-IREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIK 122

Query: 498 -------RGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
                  RG+ + HQ    RI+HRDLK  N+L++ +   K++DFGLA
Sbjct: 123 IYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLA 166

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 73.5 bits (180), Expect = 3e-14
 Identities = 23/176 (13%), Positives = 44/176 (25%), Gaps = 54/176 (30%)

Query: 413 LGKGGFGPVYKAKFPG-GQQIAVKRLSS---ASGQGLEEFKNEIE--------------- 453
           LG+       +A     G+   V             +++ K E+                
Sbjct: 81  LGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAK 140

Query: 454 -----TSNSNATIGANVKAFVREMKTFSDPTLSAL------------------------- 483
                    +       K  +R      D  + +                          
Sbjct: 141 VHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTH 200

Query: 484 --LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
             L    R  + + + R L  LH      ++H  L+  +I+LDQ     ++ F   
Sbjct: 201 KSLVHHARLQLTLQVIRLLASLH---HYGLVHTYLRPVDIVLDQRGGVFLTGFEHL 253

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 72.4 bits (178), Expect = 4e-14
 Identities = 41/155 (26%), Positives = 66/155 (42%), Gaps = 29/155 (18%)

Query: 404 TDNFSEANKLGKGGFGPVYKAK-FPGGQQIAVKRLSSASGQGLEEFKNEI----ETSNSN 458
            + +    +LG G FG VYKAK    G   A K + + S + LE++  EI       +  
Sbjct: 18  NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPY 77

Query: 459 AT--IGANVKAF-------------VREMKTFSDPTLSALLHWEMRFNIII-GIARGLLY 502
               +GA                  V  +    D  L+     E +  ++   +   L +
Sbjct: 78  IVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLT-----EPQIQVVCRQMLEALNF 132

Query: 503 LHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           LH     RIIHRDLK  N+L+  E + +++DFG++
Sbjct: 133 LHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVS 164

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 73.2 bits (179), Expect = 5e-14
 Identities = 17/175 (9%), Positives = 33/175 (18%), Gaps = 53/175 (30%)

Query: 413 LGKGGFGPVYKAKFPG-GQQIAVKRL---SSASGQGLEEFKNEIE--------------- 453
           L  G    V+  +     +  A+K     +  S   LE                      
Sbjct: 70  LRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARD 129

Query: 454 ----TSNSNATIGANVKAFVREMKTFSD---------------------------PTLSA 482
                  S+A    +   F +      D                                
Sbjct: 130 RRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRG 189

Query: 483 LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
                    +   + R    L       ++H      N+ +  +    + D    
Sbjct: 190 DEGILALHILTAQLIRLAANLQ---SKGLVHGHFTPDNLFIMPDGRLMLGDVSAL 241

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 71.8 bits (177), Expect = 5e-14
 Identities = 40/167 (23%), Positives = 67/167 (40%), Gaps = 55/167 (32%)

Query: 405 DNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGAN 464
           + +    K+G+G +G VYKA+   G+  A+K++       LE+              G  
Sbjct: 2   EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIR------LEKEDE-----------GIP 44

Query: 465 VKAFVRE---MKTFSDP---TLSALLHWEMRFNII----------------IGIA----- 497
               +RE   +K         L  ++H + R  ++                 G+      
Sbjct: 45  STT-IREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAK 103

Query: 498 -------RGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
                   G+ Y H     R++HRDLK  N+L+++E   KI+DFGLA
Sbjct: 104 SFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLA 147

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 72.3 bits (178), Expect = 6e-14
 Identities = 37/170 (21%), Positives = 69/170 (40%), Gaps = 46/170 (27%)

Query: 411 NKLGKGGFGPVYKA------KFPGGQQIAVKRL-SSASGQGLEEFKNEIE---------- 453
            +LG+G FG VY+       K     ++A+K +  +AS +   EF NE            
Sbjct: 31  RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 90

Query: 454 -------TSNSNATI------GANVKAFVR-------EMKTFSDPTLSALLHWEMRFNII 493
                  +      +        ++K+++R            + P+LS ++       + 
Sbjct: 91  VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQ------MA 144

Query: 494 IGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQ 543
             IA G+ YL   +  + +HRDL   N ++ ++   KI DFG+  D+ + 
Sbjct: 145 GEIADGMAYL---NANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 191

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 72.7 bits (179), Expect = 7e-14
 Identities = 36/172 (20%), Positives = 58/172 (33%), Gaps = 54/172 (31%)

Query: 412 KLGKGGFGPVYKAKFPGG-QQIAVKRL-SSASGQGLEEFKNEIETSNSNATIGANVKAFV 469
           ++G+G FG V+  +       +AVK    +       +F  E           A +    
Sbjct: 121 QIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQE-----------ARI---- 165

Query: 470 REMKTFSDPTLSAL--------------------------------LHWEMRFNIIIGIA 497
             +K +S P +  L                                L  +    ++   A
Sbjct: 166 --LKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAA 223

Query: 498 RGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASS 549
            G+ YL        IHRDL   N L+ ++   KISDFG++ +  D    AS 
Sbjct: 224 AGMEYLES---KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASG 272

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 71.5 bits (176), Expect = 8e-14
 Identities = 36/169 (21%), Positives = 60/169 (35%), Gaps = 39/169 (23%)

Query: 411 NKLGKGGFGPVYKAKFPGG------QQIAVKRLSSASGQGLEEFKNEIE----------- 453
            +LG+G FG V+ A+            +AVK L   +    ++F+ E E           
Sbjct: 21  RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIV 80

Query: 454 ------TSNSNATI------GANVKAFVRE-------MKTFSDPTLSALLHWEMRFNIII 494
                        +        ++  F+R        +           L      +I  
Sbjct: 81  KFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIAS 140

Query: 495 GIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQ 543
            IA G++YL   +    +HRDL T N L+   +  KI DFG++ D+   
Sbjct: 141 QIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYST 186

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 71.6 bits (176), Expect = 8e-14
 Identities = 41/165 (24%), Positives = 66/165 (40%), Gaps = 42/165 (25%)

Query: 411 NKLGKGGFGPVYKAKFPG-----GQQIAVKRL-SSASGQGLEEFKNEIE----------- 453
             LG+G FG V   ++       G+Q+AVK L   + G  + + K EIE           
Sbjct: 27  RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 86

Query: 454 ------TSNSNATI--------GANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARG 499
                 T +    I          ++K ++ + K  +   L   L +       + I +G
Sbjct: 87  KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNK--NKINLKQQLKY------AVQICKG 138

Query: 500 LLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQK 544
           + YL      + +HRDL   N+L++ E   KI DFGL   +   K
Sbjct: 139 MDYL---GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK 180

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 71.6 bits (176), Expect = 1e-13
 Identities = 39/171 (22%), Positives = 62/171 (36%), Gaps = 47/171 (27%)

Query: 411 NKLGKGGFGPVYKAKFPGG----QQIAVKRL--SSASGQGLEEFKNEIE----------- 453
             LGKG FG V +A+         ++AVK L     +   +EEF  E             
Sbjct: 29  RMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVA 88

Query: 454 ------TSNSNATIGA------------NVKAFVREMKTFSDP---TLSALLHWEMRFNI 492
                   +                   ++ AF+   +   +P    L  L+        
Sbjct: 89  KLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVR------F 142

Query: 493 IIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQ 543
           ++ IA G+ YL   S    IHRDL   N +L ++M   ++DFGL+  +   
Sbjct: 143 MVDIACGMEYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSG 190

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 71.6 bits (176), Expect = 1e-13
 Identities = 41/173 (23%), Positives = 68/173 (39%), Gaps = 43/173 (24%)

Query: 411 NKLGKGGFGPVYKAKFPG--------GQQIAVKRL-SSASGQGLEEFKNEIE-----TSN 456
             LG+G FG V  A+  G           +AVK L   A+ + L +  +E+E       +
Sbjct: 41  KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100

Query: 457 SN--ATIGA-----------------NVKAFVREMKTFSDPTLSALLHWEMR-------F 490
            N    +GA                 N++ ++R  +         +              
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160

Query: 491 NIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQ 543
           +    +ARG+ YL   +  + IHRDL   N+L+ +    KI+DFGLA D+ + 
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 71.1 bits (175), Expect = 1e-13
 Identities = 42/172 (24%), Positives = 65/172 (37%), Gaps = 42/172 (24%)

Query: 411 NKLGKGGFGPVYKA------KFPGGQQIAVKRL-SSASGQGLEEFKNEIET-----SNSN 458
             LG+G FG V +A      K    + +AVK L   A+        +E++       + N
Sbjct: 33  KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92

Query: 459 --ATIGA------------------NVKAFVRE-------MKTFSDPTLSALLHWEMRFN 491
               +GA                  N+  ++R         K   +      L  E    
Sbjct: 93  VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152

Query: 492 IIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQ 543
               +A+G+ +L   +  + IHRDL   NILL ++   KI DFGLA D+   
Sbjct: 153 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 201

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 70.8 bits (174), Expect = 2e-13
 Identities = 40/162 (24%), Positives = 65/162 (40%), Gaps = 40/162 (24%)

Query: 411 NKLGKGGFGPVYKAKFPGG----QQIAVKRL-SSASGQGLEEFKNEIET----------- 454
             +GKG FG VY  ++        Q A+K L      Q +E F  E              
Sbjct: 27  RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLA 86

Query: 455 -----SNSNATI--------GANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLL 501
                                 ++  F+R  +   +PT+  L+         + +ARG+ 
Sbjct: 87  LIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQ--RNPTVKDLIS------FGLQVARGME 138

Query: 502 YLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQ 543
           YL   +  + +HRDL   N +LD+    K++DFGLA D++D+
Sbjct: 139 YL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDR 177

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 71.2 bits (175), Expect = 2e-13
 Identities = 42/173 (24%), Positives = 71/173 (41%), Gaps = 43/173 (24%)

Query: 411 NKLGKGGFGPVYKAKFPG--------GQQIAVKRL-SSASGQGLEEFKNEIE-----TSN 456
             LG+G FG V  A+  G           +AVK L   A+ + L +  +E+E       +
Sbjct: 87  KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 146

Query: 457 SN--ATIGA-----------------NVKAFVR-------EMKTFSDPTLSALLHWEMRF 490
            N    +GA                 N++ ++R       E     +      + ++   
Sbjct: 147 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 206

Query: 491 NIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQ 543
           +    +ARG+ YL   +  + IHRDL   N+L+ +    KI+DFGLA D+ + 
Sbjct: 207 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 256

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 71.2 bits (175), Expect = 2e-13
 Identities = 35/184 (19%), Positives = 58/184 (31%), Gaps = 60/184 (32%)

Query: 411 NKLGKGGFGPVYKA------KFPGGQQIAVKRL-SSASGQGLEEFKNEIE---------- 453
             +G+G FG V++A       +     +AVK L   AS     +F+ E            
Sbjct: 53  RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNI 112

Query: 454 ----------------------------------TSNSNATIGANVKAFVREMKTFSDPT 479
                                              +  + +                  +
Sbjct: 113 VKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLS 172

Query: 480 LSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALD 539
            +  L       I   +A G+ YL   S  + +HRDL T N L+ + M  KI+DFGL+ +
Sbjct: 173 CAEQLC------IARQVAAGMAYL---SERKFVHRDLATRNCLVGENMVVKIADFGLSRN 223

Query: 540 MMDQ 543
           +   
Sbjct: 224 IYSA 227

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 71.7 bits (176), Expect = 2e-13
 Identities = 37/159 (23%), Positives = 58/159 (36%), Gaps = 40/159 (25%)

Query: 406 NFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIE---TSNSNATIG 462
           +F   + LG G  G +        + +AVKR+             E++    S+ +  + 
Sbjct: 25  SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC---FSFADREVQLLRESDEHPNV- 80

Query: 463 ANVKAFVREMKTFSDP------------TLSALL------HWEMR-FNIIIGIARGLLYL 503
                 +R   T  D             TL   +      H  +    ++     GL +L
Sbjct: 81  ------IRYFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHL 134

Query: 504 HQDSRLRIIHRDLKTSNILL-----DQEMNPKISDFGLA 537
           H    L I+HRDLK  NIL+       ++   ISDFGL 
Sbjct: 135 HS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLC 170

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 71.7 bits (176), Expect = 2e-13
 Identities = 40/161 (24%), Positives = 64/161 (39%), Gaps = 33/161 (20%)

Query: 411 NKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIET---------------- 454
            KLG G FG V+ A +    ++AVK +   S   +E F  E                   
Sbjct: 194 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS-VEAFLAEANVMKTLQHDKLVKLHAVV 252

Query: 455 SNSNATI------GANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSR 508
           +     I        ++  F++  +  S   L  L+           IA G+ ++    +
Sbjct: 253 TKEPIYIITEFMAKGSLLDFLKSDEG-SKQPLPKLID------FSAQIAEGMAFI---EQ 302

Query: 509 LRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASS 549
              IHRDL+ +NIL+   +  KI+DFGLA  + D +  A  
Sbjct: 303 RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTARE 343

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 70.4 bits (173), Expect = 2e-13
 Identities = 48/241 (19%), Positives = 83/241 (34%), Gaps = 61/241 (25%)

Query: 339 IIYFYTRRKRINSQGRSINRPNMAAPFYESARHVKDMVVDSDQFKEEEKQGIDLPFIDFE 398
           + Y Y ++ +   + + I      +  +          +D  Q    EK       + F 
Sbjct: 2   VDYKYKQKPKYQVRWKIIESYEGNSYTF----------IDPTQLPYNEKWEFPRNNLQFG 51

Query: 399 SILAATDNFSEANKLGKGGFGPVYKA------KFPGGQQIAVKRL-SSASGQGLEEFKNE 451
                         LG G FG V +A      K     ++AVK L S+A     E   +E
Sbjct: 52  ------------KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSE 99

Query: 452 IE-----TSNSN--ATIGA-----------------NVKAFVRE-----MKTFSDPTLSA 482
           ++       + N    +GA                 ++  F+R          +    ++
Sbjct: 100 LKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANS 159

Query: 483 LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD 542
                   +    +A+G+ +L   +    IHRD+   N+LL      KI DFGLA D+M+
Sbjct: 160 TASTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN 216

Query: 543 Q 543
            
Sbjct: 217 D 217

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 70.4 bits (173), Expect = 2e-13
 Identities = 42/164 (25%), Positives = 67/164 (40%), Gaps = 38/164 (23%)

Query: 411 NKLGKGGFGPVYKAKFPGG---QQIAVKRL-SSASGQGLEEFKNEIE-----TSNSN--A 459
           + +G+G FG V KA+          A+KR+   AS     +F  E+E       + N   
Sbjct: 31  DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 90

Query: 460 TIGA-----------------NVKAFVREMKTFSDPTLSALLHWEMR-------FNIIIG 495
            +GA                 N+  F+R+ +        A+ +            +    
Sbjct: 91  LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 150

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALD 539
           +ARG+ YL   S+ + IHRDL   NIL+ +    KI+DFGL+  
Sbjct: 151 VARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRG 191

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 70.5 bits (173), Expect = 3e-13
 Identities = 39/157 (24%), Positives = 65/157 (41%), Gaps = 41/157 (26%)

Query: 411 NKLGKGGFGPVYKAKFPG-----GQQIAVKRLSSASGQGLEEFKNEIE------------ 453
           ++LGKG FG V   ++       G  +AVK+L  +      +F+ EI+            
Sbjct: 29  SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 88

Query: 454 -----TSNSNATI--------GANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGL 500
                      ++           ++ F++  +  +    S LL +         I +G+
Sbjct: 89  YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHR--ARLDASRLLLY------SSQICKGM 140

Query: 501 LYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            YL      R +HRDL   NIL++ E + KI+DFGLA
Sbjct: 141 EYLGS---RRCVHRDLAARNILVESEAHVKIADFGLA 174

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 70.3 bits (173), Expect = 3e-13
 Identities = 37/161 (22%), Positives = 71/161 (44%), Gaps = 30/161 (18%)

Query: 401 LAATDNFSEANKLGKGGFGPVYKAK-FPGGQQIAVKRLSSASGQG-----------LEEF 448
           ++++  F +  KLG G +  VYK      G  +A+K +   S +G           ++E 
Sbjct: 1   MSSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKEL 60

Query: 449 K-------NEIETSNSNATIGANVKAFV-----REMKTFSDPTLSALLHWEMRFNIIIGI 496
           K        ++  + +  T+   V  F+     + M + +       L   +       +
Sbjct: 61  KHENIVRLYDVIHTENKLTL---VFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQL 117

Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            +GL + H++   +I+HRDLK  N+L+++    K+ DFGLA
Sbjct: 118 LQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLA 155

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 69.5 bits (171), Expect = 3e-13
 Identities = 43/170 (25%), Positives = 70/170 (41%), Gaps = 40/170 (23%)

Query: 411 NKLGKGGFGPVYKAKFPGG------QQIAVKRL-SSASGQGLEEFKNEIE---------- 453
            +LG+  FG VYK    G       Q +A+K L   A G   EEF++E            
Sbjct: 15  EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 74

Query: 454 -------TSNSNATI------GANVKAFVRE-------MKTFSDPTLSALLHWEMRFNII 493
                  T +   ++        ++  F+           T  D T+ + L      +++
Sbjct: 75  VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 134

Query: 494 IGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQ 543
             IA G+ YL   S   ++H+DL T N+L+  ++N KISD GL  ++   
Sbjct: 135 AQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAA 181

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 69.1 bits (170), Expect = 4e-13
 Identities = 35/168 (20%), Positives = 66/168 (39%), Gaps = 56/168 (33%)

Query: 405 DNFSEANKLGKGGFGPVYKAK-FPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGA 463
             + +  K+G+G +G V+KAK     + +A+KR+       L++              G 
Sbjct: 2   QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVR------LDDDDE-----------GV 44

Query: 464 NVKAFVRE---MKTFSDP---TLSALLHWEMRFNII----------------IGIA---- 497
              A +RE   +K         L  +LH + +  ++                  +     
Sbjct: 45  PSSA-LREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIV 103

Query: 498 --------RGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
                   +GL + H      ++HRDLK  N+L+++    K+++FGLA
Sbjct: 104 KSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLA 148

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 71.1 bits (174), Expect = 4e-13
 Identities = 43/233 (18%), Positives = 70/233 (30%), Gaps = 61/233 (26%)

Query: 340 IYFYTRRKRINSQGRSINRPNMAAPFYESARHVKDMVVDSDQFKEEEKQGIDLPFIDFES 399
           +    RR    +       P       +      D  V    F + E+      F+  ++
Sbjct: 277 LTHPQRRIDTLNSDGYTPEPARITSPDKPRPMPMDTSVFESPFSDPEELKDKKLFLKRDN 336

Query: 400 ILAATDNFSEANKLGKGGFGPVYKA--KFPGGQ-QIAVKRL-SSASGQGLEEFKNEIETS 455
           +L A        +LG G FG V +   +    Q  +A+K L         EE   E    
Sbjct: 337 LLIAD------IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMRE---- 386

Query: 456 NSNATIGANVKAFVREMKTFSDPTLSAL-------------------------------L 484
                  A +      M    +P +  L                               +
Sbjct: 387 -------AQI------MHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEI 433

Query: 485 HWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
                  ++  ++ G+ YL        +HR+L   N+LL      KISDFGL+
Sbjct: 434 PVSNVAELLHQVSMGMKYL---EEKNFVHRNLAARNVLLVNRHYAKISDFGLS 483

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 69.6 bits (171), Expect = 5e-13
 Identities = 41/179 (22%), Positives = 65/179 (36%), Gaps = 50/179 (27%)

Query: 411 NKLGKGGFGPVYKA------KFPGGQQIAVKRL-SSASGQGLEEFKNEIET--------- 454
             LG+G FG V KA         G   +AVK L  +AS   L +  +E            
Sbjct: 29  KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88

Query: 455 ------------------------------SNSNATIGANVKAFVREMKTFSDPTLSALL 484
                                          +     G       R   +   P   AL 
Sbjct: 89  IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148

Query: 485 HWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQ 543
             ++  +    I++G+ YL   + ++++HRDL   NIL+ +    KISDFGL+ D+ ++
Sbjct: 149 MGDL-ISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE 203

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 68.9 bits (169), Expect = 5e-13
 Identities = 38/163 (23%), Positives = 59/163 (36%), Gaps = 36/163 (22%)

Query: 413 LGKGGFGPVYKAK-FPGGQQIAVKRLSSASGQGLEEFKNEI-----------------ET 454
           LGKG +G VY  +      +IA+K +     +  +    EI                  +
Sbjct: 30  LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89

Query: 455 SNSNATI------GANVKAFVREMKTFSDPTLSALLHWEMRFNIIIG-IARGLLYLHQDS 507
            N    I      G ++ A +R            L   E         I  GL YLH + 
Sbjct: 90  ENGFIKIFMEQVPGGSLSALLRSKW-------GPLKDNEQTIGFYTKQILEGLKYLHDN- 141

Query: 508 RLRIIHRDLKTSNILLDQEM-NPKISDFGLALDMMDQKLHASS 549
             +I+HRD+K  N+L++      KISDFG +  +        +
Sbjct: 142 --QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET 182

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 68.7 bits (169), Expect = 6e-13
 Identities = 43/169 (25%), Positives = 72/169 (42%), Gaps = 57/169 (33%)

Query: 405 DNFSEANKLGKGGFGPVYKAK-FPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGA 463
           +NF +  K+G+G +G VYKA+    G+ +A+K++       L+               G 
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR------LDTETE-----------GV 45

Query: 464 NVKAFVRE---MKTFSDP---TLSALLHWEMRFNII-----------------IGIA--- 497
              A +RE   +K  + P    L  ++H E +  ++                  GI    
Sbjct: 46  PSTA-IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL 104

Query: 498 ---------RGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
                    +GL + H     R++HRDLK  N+L++ E   K++DFGLA
Sbjct: 105 IKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 150

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 68.8 bits (169), Expect = 6e-13
 Identities = 39/179 (21%), Positives = 55/179 (30%), Gaps = 55/179 (30%)

Query: 411 NKLGKGGFGPVYKA------KFPGGQQIAVKRL-SSASGQGLEEFKNEIET--------- 454
             LG G FG V +A      K      +AVK L  SA     E   +E++          
Sbjct: 29  KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 88

Query: 455 ------------------------------SNSNATIGANVKAFVREMKTFSDPTLSALL 484
                                              +   +  +            L  LL
Sbjct: 89  IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 148

Query: 485 HWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQ 543
            +         +A+G+ +L   +    IHRDL   NILL      KI DFGLA D+ + 
Sbjct: 149 SFS------YQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKND 198

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 69.2 bits (170), Expect = 7e-13
 Identities = 36/153 (23%), Positives = 75/153 (49%), Gaps = 27/153 (17%)

Query: 405 DNFSEANKLGKGGFGPVYKAKFPG-GQQIAVKRLSSASGQG-----------LEEFKN-- 450
           + + + +KLG+G +  VYK K       +A+K +     +G           L++ K+  
Sbjct: 2   ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHAN 61

Query: 451 -----EIETSNSNATIGANVKAFV-REMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLH 504
                +I  +  + T+   V  ++ +++K + D   + +    ++   +  + RGL Y H
Sbjct: 62  IVTLHDIIHTEKSLTL---VFEYLDKDLKQYLDDCGNIINMHNVK-LFLFQLLRGLAYCH 117

Query: 505 QDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           +    +++HRDLK  N+L+++    K++DFGLA
Sbjct: 118 RQ---KVLHRDLKPQNLLINERGELKLADFGLA 147

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 69.3 bits (170), Expect = 7e-13
 Identities = 40/184 (21%), Positives = 57/184 (30%), Gaps = 60/184 (32%)

Query: 411 NKLGKGGFGPVYKA------KFPGGQQIAVKRL-SSASGQGLEEFKNEIE---------- 453
             LG G FG V  A      K     Q+AVK L   A     E   +E++          
Sbjct: 51  KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHEN 110

Query: 454 ----------------------------------TSNSNATIGANVKAFVREMKTFSDPT 479
                                                S   I    +  + E +  +  T
Sbjct: 111 IVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLT 170

Query: 480 LSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALD 539
              LL +         +A+G+ +L        +HRDL   N+L+      KI DFGLA D
Sbjct: 171 FEDLLCF------AYQVAKGMEFL---EFKSCVHRDLAARNVLVTHGKVVKICDFGLARD 221

Query: 540 MMDQ 543
           +M  
Sbjct: 222 IMSD 225

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 69.8 bits (171), Expect = 7e-13
 Identities = 37/162 (22%), Positives = 63/162 (38%), Gaps = 33/162 (20%)

Query: 411 NKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGA- 463
            KLG+G FG V+   + G  ++A+K L   +    E F  E +                 
Sbjct: 190 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVV 248

Query: 464 ---------------NVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSR 508
                          ++  F++         L  L+           IA G+ Y+    R
Sbjct: 249 SEEPIYIVTEYMSKGSLLDFLKGETG-KYLRLPQLVDM------AAQIASGMAYV---ER 298

Query: 509 LRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSK 550
           +  +HRDL+ +NIL+ + +  K++DFGLA  + D +  A   
Sbjct: 299 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 340

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 69.3 bits (170), Expect = 8e-13
 Identities = 42/173 (24%), Positives = 72/173 (41%), Gaps = 43/173 (24%)

Query: 411 NKLGKGGFGPVYKAKFPG--------GQQIAVKRL-SSASGQGLEEFKNEIET------- 454
             LG+G FG V  A+  G          ++AVK L S A+ + L +  +E+E        
Sbjct: 75  KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 134

Query: 455 SNSNATIGA-----------------NVKAFVREMKTFSDPTLSALLH---WEMRFNIII 494
            N    +GA                 N++ +++  +           H    ++    ++
Sbjct: 135 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 194

Query: 495 G----IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQ 543
                +ARG+ YL   +  + IHRDL   N+L+ ++   KI+DFGLA D+   
Sbjct: 195 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 244

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 68.8 bits (168), Expect = 9e-13
 Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 6/74 (8%)

Query: 491 NIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM---MDQKLHA 547
           +I I IA  + +LH      ++HRDLK SNI    +   K+ DFGL   M    +++   
Sbjct: 168 HIFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL 224

Query: 548 SSKPNEILKCINVG 561
           +  P        VG
Sbjct: 225 TPMPAYATHTGQVG 238

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 68.6 bits (168), Expect = 1e-12
 Identities = 36/166 (21%), Positives = 59/166 (35%), Gaps = 32/166 (19%)

Query: 411 NKLGKGGFGPVYKAK-FPGGQQIAVK--RLSSASGQ---GLEEFKNE-------IETSNS 457
            ++G+G FG V++ K    G Q AVK  RL     +         +              
Sbjct: 64  PRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGP 123

Query: 458 NATI------GANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRI 511
              I      G ++   +++M    +               +     GL YLH     RI
Sbjct: 124 WVNIFMELLEGGSLGQLIKQMGCLPEDRAL---------YYLGQALEGLEYLHTR---RI 171

Query: 512 IHRDLKTSNILLDQEMNP-KISDFGLALDMMDQKLHASSKPNEILK 556
           +H D+K  N+LL  + +   + DFG AL +    L  S    + + 
Sbjct: 172 LHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIP 217

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 68.1 bits (167), Expect = 1e-12
 Identities = 38/158 (24%), Positives = 70/158 (44%), Gaps = 36/158 (22%)

Query: 404 TDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQG-LEEFKNEI----ETSNS 457
            + F++  K+GKG FG V+K       + +A+K +     +  +E+ + EI    +  + 
Sbjct: 21  EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 80

Query: 458 NAT--IGANVKAF----------------VREMKTFSDPTLSALLHWEMRFNIIIGIARG 499
             T   G+ +K                  + E     +  ++ +L           I +G
Sbjct: 81  YVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILR---------EILKG 131

Query: 500 LLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           L YLH +   + IHRD+K +N+LL +    K++DFG+A
Sbjct: 132 LDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVA 166

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 68.2 bits (167), Expect = 1e-12
 Identities = 46/155 (29%), Positives = 70/155 (45%), Gaps = 31/155 (20%)

Query: 404 TDNFSEANKLGKGGFGPVYKAKFPG-GQQIAVKRLSSASGQGLEEFKNEI----ETSNSN 458
            + F    KLG+G +G VYKA     GQ +A+K++       L+E   EI    +  + +
Sbjct: 28  EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE--SDLQEIIKEISIMQQCDSPH 85

Query: 459 AT--IGANVKAF-------------VREMKTFSDPTLSALLHWEMRFNIII-GIARGLLY 502
                G+  K               V ++    + TL+     E     I+    +GL Y
Sbjct: 86  VVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLT-----EDEIATILQSTLKGLEY 140

Query: 503 LHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           LH     R IHRD+K  NILL+ E + K++DFG+A
Sbjct: 141 LHFM---RKIHRDIKAGNILLNTEGHAKLADFGVA 172

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 69.5 bits (170), Expect = 1e-12
 Identities = 37/162 (22%), Positives = 63/162 (38%), Gaps = 33/162 (20%)

Query: 411 NKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGA- 463
            KLG+G FG V+   + G  ++A+K L   +    E F  E +                 
Sbjct: 273 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVV 331

Query: 464 ---------------NVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSR 508
                          ++  F++         L  L+           IA G+ Y+    R
Sbjct: 332 SEEPIYIVTEYMSKGSLLDFLKGETG-KYLRLPQLVDM------AAQIASGMAYV---ER 381

Query: 509 LRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSK 550
           +  +HRDL+ +NIL+ + +  K++DFGLA  + D +  A   
Sbjct: 382 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 423

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 67.7 bits (166), Expect = 1e-12
 Identities = 40/160 (25%), Positives = 71/160 (44%), Gaps = 33/160 (20%)

Query: 405 DNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQ-GLEEFKNEIET-SNSNATI 461
           D++     +G G    V  A   P  +++A+KR++    Q  ++E   EI+  S  +   
Sbjct: 15  DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHH-- 72

Query: 462 GANV----KAFVRE------MKTFSDPTLSALLHWEMRFNIIIG-------IA------- 497
             N+     +FV +      MK  S  ++  ++   +              IA       
Sbjct: 73  -PNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 131

Query: 498 RGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            GL YLH++     IHRD+K  NILL ++ + +I+DFG++
Sbjct: 132 EGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVS 168

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 67.3 bits (165), Expect = 2e-12
 Identities = 34/158 (21%), Positives = 61/158 (38%), Gaps = 38/158 (24%)

Query: 412 KLGKGGFGPVYKA--KFPGGQQI--AVKRL-SSASGQGLEEFKNEIET------------ 454
            +G+G FG V++     P    +  A+K   +  S    E+F  E  T            
Sbjct: 22  CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 81

Query: 455 ----SNSNATI------GANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLH 504
               + +   I         +++F++  K      L++L+ +         ++  L YL 
Sbjct: 82  IGVITENPVWIIMELCTLGELRSFLQVRK--YSLDLASLILY------AYQLSTALAYL- 132

Query: 505 QDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD 542
                R +HRD+   N+L+      K+ DFGL+  M D
Sbjct: 133 --ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 168

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 68.7 bits (168), Expect = 2e-12
 Identities = 44/169 (26%), Positives = 63/169 (37%), Gaps = 44/169 (26%)

Query: 405 DNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEI------------ 452
           +       LG G  G V       G+ +AVKR+        +    EI            
Sbjct: 15  NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNV 71

Query: 453 ------ETSNSNATI-----GANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLL 501
                 ET++    I       N++  V E K  SD  L     +    +++  IA G+ 
Sbjct: 72  IRYYCSETTDRFLYIALELCNLNLQDLV-ESKNVSDENLKLQKEYNPI-SLLRQIASGVA 129

Query: 502 YLHQDSRLRIIHRDLKTSNILLD-------------QEMNPKISDFGLA 537
           +LH    L+IIHRDLK  NIL+              + +   ISDFGL 
Sbjct: 130 HLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLC 175

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 67.2 bits (165), Expect = 2e-12
 Identities = 34/166 (20%), Positives = 62/166 (37%), Gaps = 38/166 (22%)

Query: 412 KLGKGGFGPVYKAKF--PGGQQI--AVKRL-SSASGQGLEEFKNEIET------------ 454
            LG+G FG VY+  +    G++I  AVK      +    E+F +E               
Sbjct: 19  ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78

Query: 455 ----SNSNATI------GANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLH 504
                     I         +  ++   K  +   +  L+ +       + I + + YL 
Sbjct: 79  IGIIEEEPTWIIMELYPYGELGHYLERNK--NSLKVLTLVLY------SLQICKAMAYL- 129

Query: 505 QDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSK 550
               +  +HRD+   NIL+      K+ DFGL+  + D+  + +S 
Sbjct: 130 --ESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASV 173

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 66.9 bits (164), Expect = 2e-12
 Identities = 34/154 (22%), Positives = 57/154 (37%), Gaps = 41/154 (26%)

Query: 412 KLGKGGFGPVYKAKFPGG---QQIAVKRL--SSASGQGLEEFKNEIET----SNSN---- 458
           +LG G FG V K  +      + +AVK L   +      +E   E        N      
Sbjct: 24  ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 83

Query: 459 ---------------ATIGANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYL 503
                          A +G  +  ++++ +   D  +           ++  ++ G+ YL
Sbjct: 84  IGICEAESWMLVMEMAELG-PLNKYLQQNRHVKDKNI---------IELVHQVSMGMKYL 133

Query: 504 HQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
                   +HRDL   N+LL  +   KISDFGL+
Sbjct: 134 ---EESNFVHRDLAARNVLLVTQHYAKISDFGLS 164

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 67.4 bits (165), Expect = 3e-12
 Identities = 40/156 (25%), Positives = 66/156 (42%), Gaps = 29/156 (18%)

Query: 404 TDNFSEANKLGKGGFGPVYKAKFPG-GQQIAVKRLS---SASGQGLEEFKNEI----ETS 455
              FS+  ++G G FG VY A+     + +A+K++S     S +  ++   E+    +  
Sbjct: 53  EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 112

Query: 456 NSNAT--IGANVKAFVREMKTF--------SDPTLSALLHWEMRFNIIIGIAR----GLL 501
           + N     G     ++RE   +        S   L  +    ++   I  +      GL 
Sbjct: 113 HPNTIQYRGC----YLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLA 168

Query: 502 YLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           YLH      +IHRD+K  NILL +    K+ DFG A
Sbjct: 169 YLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSA 201

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 66.9 bits (164), Expect = 3e-12
 Identities = 42/189 (22%), Positives = 64/189 (33%), Gaps = 76/189 (40%)

Query: 392 LPFIDFESILAATDNFSEANKLGKGGFGPVYKAKF--PGGQQ---IAVKRL-SSASGQGL 445
           L  +             +   LG G FG VYK  +   G +    +A+K L  + S +  
Sbjct: 9   LRILKETEF-------KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN 61

Query: 446 EEFKNEIETSNSNATIGANVKAFVREMKTFSDP--------------------------- 478
           +E  +E           A V      M +  +P                           
Sbjct: 62  KEILDE-----------AYV------MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLL 104

Query: 479 ----------TLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMN 528
                         LL+W       + IA+G+ YL      R++HRDL   N+L+    +
Sbjct: 105 DYVREHKDNIGSQYLLNW------CVQIAKGMNYL---EDRRLVHRDLAARNVLVKTPQH 155

Query: 529 PKISDFGLA 537
            KI+DFGLA
Sbjct: 156 VKITDFGLA 164

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 66.5 bits (163), Expect = 4e-12
 Identities = 36/155 (23%), Positives = 59/155 (38%), Gaps = 35/155 (22%)

Query: 411 NKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIE----------------- 453
            +LG G FG V   K+ G   +A+K +   S    +EF  E +                 
Sbjct: 30  KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKLVQLYGVC 88

Query: 454 TSNSNATI------GANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDS 507
           T      I         +  ++REM+         LL       +   +   + YL    
Sbjct: 89  TKQRPIFIITEYMANGCLLNYLREMR--HRFQTQQLLE------MCKDVCEAMEYL---E 137

Query: 508 RLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD 542
             + +HRDL   N L++ +   K+SDFGL+  ++D
Sbjct: 138 SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 172

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 66.9 bits (164), Expect = 4e-12
 Identities = 37/170 (21%), Positives = 60/170 (35%), Gaps = 57/170 (33%)

Query: 411 NKLGKGGFGPVYKA--KFPGGQQI--AVKRL-SSASGQGLEEFKNEIETSNSNATIGANV 465
             +G G  G V     + PG + +  A+K L +  + +   +F +E       A+I    
Sbjct: 55  KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSE-------ASI---- 103

Query: 466 KAFVREMKTFSDPTLSAL--------------------------------LHWEMRFNII 493
                 M  F  P +  L                                        ++
Sbjct: 104 ------MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGML 157

Query: 494 IGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQ 543
            G+  G+ YL   S L  +HRDL   N+L+D  +  K+SDFGL+  + D 
Sbjct: 158 RGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD 204

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 66.8 bits (164), Expect = 4e-12
 Identities = 42/168 (25%), Positives = 67/168 (39%), Gaps = 53/168 (31%)

Query: 405 DNFSEANKLGKGGFGPVYKAK-FPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGA 463
             + + + LG+G F  VYKA+     Q +A+K++       L       +        G 
Sbjct: 10  KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIK------LGHRSEAKD--------GI 55

Query: 464 NVKAFVRE---MKTFSDP---TLSALLHWEMRFNII------------------------ 493
           N  A +RE   ++  S P    L      +   +++                        
Sbjct: 56  NRTA-LREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHI 114

Query: 494 ----IGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
               +   +GL YLHQ     I+HRDLK +N+LLD+    K++DFGLA
Sbjct: 115 KAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLA 159

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 67.5 bits (165), Expect = 5e-12
 Identities = 42/251 (16%), Positives = 89/251 (35%), Gaps = 74/251 (29%)

Query: 383 KEEEKQGIDLPFIDFESILAATDNFSEANKLGKGGFGPVYKAK-FPGGQQIAVKRLSSAS 441
             +    +  P  D++      D +   + +G G +G V +A      + +A+K++    
Sbjct: 35  SSKPTASMPRPHSDWQ----IPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRV- 89

Query: 442 GQGLEEFKNEIETSNSNATIGANVKAFVRE---MKTFSDPTLSAL--------------- 483
                 F++ I+            K  +RE   +   +   +  +               
Sbjct: 90  ------FEDLIDC-----------KRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132

Query: 484 ----------LHWEMRFNIIIG----------IARGLLYLHQDSRLRIIHRDLKTSNILL 523
                          R  + +           +  G+ Y+H  S   I+HRDLK +N L+
Sbjct: 133 YVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVH--SA-GILHRDLKPANCLV 189

Query: 524 DQEMNPKISDFGLALDMMDQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVV---- 579
           +Q+ + K+ DFGLA   +D   + +S+     +  ++ L+      N +  ++  V    
Sbjct: 190 NQDCSVKVCDFGLA-RTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRW 248

Query: 580 -----IMLGSE 585
                ++L  E
Sbjct: 249 YRAPELILLQE 259

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 66.1 bits (162), Expect = 5e-12
 Identities = 34/167 (20%), Positives = 52/167 (31%), Gaps = 55/167 (32%)

Query: 412 KLGKGGFGPVYKAKFPGGQ---QIAVKRL-SSASGQGLEEFKNEIETSNSNATIGANVKA 467
           +LG G FG V +  +   +    +A+K L         EE   E       A I      
Sbjct: 17  ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMRE-------AQI------ 63

Query: 468 FVREMKTFSDPTLSAL-------------------------------LHWEMRFNIIIGI 496
               M    +P +  L                               +       ++  +
Sbjct: 64  ----MHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQV 119

Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQ 543
           + G+ YL        +HRDL   N+LL      KISDFGL+  +   
Sbjct: 120 SMGMKYL---EEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGAD 163

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 65.7 bits (161), Expect = 5e-12
 Identities = 37/163 (22%), Positives = 55/163 (33%), Gaps = 53/163 (32%)

Query: 412 KLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVKAFVRE 471
           +LG G FG V   K+ G   +AVK +   S    +EF  E           A        
Sbjct: 15  ELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQE-----------AQT------ 56

Query: 472 MKTFSDPTLSAL--------------------------------LHWEMRFNIIIGIARG 499
           M   S P L                                   L       +   +  G
Sbjct: 57  MMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEG 116

Query: 500 LLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD 542
           + +L      + IHRDL   N L+D+++  K+SDFG+   ++D
Sbjct: 117 MAFL---ESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLD 156

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 66.9 bits (163), Expect = 5e-12
 Identities = 27/173 (15%), Positives = 50/173 (28%), Gaps = 39/173 (22%)

Query: 404 TDNFSEANKLGKGGFGPVYKAKFPG------GQQIAVKRLSSASGQGLEEFKNEIE--TS 455
           +      + LG+G F  VY+A           Q+  +K    A+          +E    
Sbjct: 64  SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKP 123

Query: 456 NSNATIGANVKAFVREMKTF------SDPTLSALLHWEMRFN-----------IIIGIAR 498
           +          A + +  +       S  TL   ++                   + +  
Sbjct: 124 SMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLY 183

Query: 499 GLLYLHQDSRLRIIHRDLKTSNILLDQEMNP-----------KISDFGLALDM 540
            +  +H      IIH D+K  N +L                  + D G ++DM
Sbjct: 184 MIEQVHD---CEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDM 233

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 67.4 bits (165), Expect = 6e-12
 Identities = 30/153 (19%), Positives = 53/153 (34%), Gaps = 37/153 (24%)

Query: 411 NKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIET---------------- 454
             +GKG FG V    +  G ++AVK +   +    + F  E                   
Sbjct: 199 QTIGKGEFGDVMLGDY-RGNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVI 255

Query: 455 SNSNATI--------GANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQD 506
                 +          ++  ++R  +  S      LL         + +   + YL   
Sbjct: 256 VEEKGGLYIVTEYMAKGSLVDYLRS-RGRSVLGGDCLL------KFSLDVCEAMEYL--- 305

Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLALD 539
                +HRDL   N+L+ ++   K+SDFGL  +
Sbjct: 306 EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKE 338

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 65.7 bits (161), Expect = 6e-12
 Identities = 40/164 (24%), Positives = 59/164 (35%), Gaps = 53/164 (32%)

Query: 411 NKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVKAFVR 470
            +LG G FG V+   + G  ++AVK L   S    + F  E           AN+     
Sbjct: 19  ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAE-----------ANL----- 61

Query: 471 EMKTFSDPTLSAL--------------------------------LHWEMRFNIIIGIAR 498
            MK      L  L                                L      ++   IA 
Sbjct: 62  -MKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 120

Query: 499 GLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD 542
           G+ ++        IHRDL+ +NIL+   ++ KI+DFGLA  + D
Sbjct: 121 GMAFI---EERNYIHRDLRAANILVSDTLSCKIADFGLARLIED 161

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 65.9 bits (161), Expect = 6e-12
 Identities = 30/177 (16%), Positives = 66/177 (37%), Gaps = 42/177 (23%)

Query: 405 DNFSEANKLGKGGFGPVYKAK-FPGGQQIAVKRLS-SASGQGLEEFKNEI---------- 452
             +  ++ LG+G    V++ +    G   A+K  +  +  + ++    E           
Sbjct: 9   HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKN 68

Query: 453 --------ETSNSNATI-------GANVKAFVREMKTFSDPTLSALLHWEMRFNIIIG-I 496
                   E + +   +         ++   + E    +   L      E  F I++  +
Sbjct: 69  IVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPS--NAYGLP-----ESEFLIVLRDV 121

Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILL----DQEMNPKISDFGLALDMMDQKLHASS 549
             G+ +L +     I+HR++K  NI+     D +   K++DFG A ++ D +   S 
Sbjct: 122 VGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSL 175

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 67.6 bits (165), Expect = 7e-12
 Identities = 34/159 (21%), Positives = 61/159 (38%), Gaps = 38/159 (23%)

Query: 412 KLGKGGFGPVYKA--KFPGGQQI--AVKRL-SSASGQGLEEFKNEIET------------ 454
            +G+G FG V++     P    +  A+K   +  S    E+F  E  T            
Sbjct: 397 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 456

Query: 455 ----SNSNATI------GANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLH 504
               + +   I         +++F++  K      L++L+ +         ++  L YL 
Sbjct: 457 IGVITENPVWIIMELCTLGELRSFLQVRK--FSLDLASLILY------AYQLSTALAYL- 507

Query: 505 QDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQ 543
                R +HRD+   N+L+      K+ DFGL+  M D 
Sbjct: 508 --ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 544

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 67.4 bits (164), Expect = 8e-12
 Identities = 45/175 (25%), Positives = 66/175 (37%), Gaps = 41/175 (23%)

Query: 404 TDNFSEANKLGKGGFGPVYKAK-FPGGQQIAVKRLSSASGQGLEE-FKNEIET----SNS 457
              +    +LG GGFG V +      G+Q+A+K+          E +  EI+     ++ 
Sbjct: 13  CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHP 72

Query: 458 NATIGANVKAF-VREMKTFSDPTLSALLHWEM-----RFNIIIG---------------- 495
           N  +   V A  V +      P    LL  E          +                  
Sbjct: 73  N--V---VSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLL 127

Query: 496 --IARGLLYLHQDSRLRIIHRDLKTSNILLD---QEMNPKISDFGLALDMMDQKL 545
             I+  L YLH+    RIIHRDLK  NI+L    Q +  KI D G A ++   +L
Sbjct: 128 SDISSALRYLHE---NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL 179

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 66.2 bits (162), Expect = 8e-12
 Identities = 40/170 (23%), Positives = 59/170 (34%), Gaps = 57/170 (33%)

Query: 411 NKLGKGGFGPVYKA--KFPGGQQI--AVKRL-SSASGQGLEEFKNEIETSNSNATIGANV 465
             +G G FG V     K P  ++I  A+K L    + +   +F  E       A+I    
Sbjct: 51  KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE-------ASI---- 99

Query: 466 KAFVREMKTFSDPTLSAL--------------------------------LHWEMRFNII 493
                 M  F  P +  L                                        ++
Sbjct: 100 ------MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153

Query: 494 IGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQ 543
            GIA G+ YL   S +  +HRDL   NIL++  +  K+SDFGL   + D 
Sbjct: 154 RGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDD 200

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 64.9 bits (159), Expect = 8e-12
 Identities = 30/155 (19%), Positives = 57/155 (36%), Gaps = 35/155 (22%)

Query: 411 NKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIE----------------- 453
            ++G G FG V+   +    ++A+K +   +    E+F  E E                 
Sbjct: 14  QEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVC 72

Query: 454 TSNSNATI------GANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDS 507
              +   +         +  ++R  +         LL       + + +  G+ YL    
Sbjct: 73  LEQAPICLVTEFMEHGCLSDYLRTQR--GLFAAETLLG------MCLDVCEGMAYL---E 121

Query: 508 RLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD 542
              +IHRDL   N L+ +    K+SDFG+   ++D
Sbjct: 122 EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD 156

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 65.7 bits (161), Expect = 8e-12
 Identities = 38/163 (23%), Positives = 64/163 (39%), Gaps = 42/163 (25%)

Query: 405 DNFSEANKLGKGGFGPVYKAKFPG-GQQIAVKRLS-SASGQG-----------LEEFKN- 450
           D +    KLG+G +G VYKA      + +A+KR+      +G           L+E ++ 
Sbjct: 34  DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHR 93

Query: 451 ------EIETSNSNATI-----GANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARG 499
                  +   N    +       ++K ++ +    S   + + L+          +  G
Sbjct: 94  NIIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLY---------QLING 144

Query: 500 LLYLHQDSRLRIIHRDLKTSNILLDQEMNP-----KISDFGLA 537
           + + H     R +HRDLK  N+LL           KI DFGLA
Sbjct: 145 VNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLA 184

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 66.1 bits (162), Expect = 8e-12
 Identities = 40/161 (24%), Positives = 81/161 (50%), Gaps = 34/161 (21%)

Query: 405 DNFSEANKLGKGGFGPVYKAK-FPGGQQIAVKRL---SSASG---------QGLEEFKN- 450
             + +  K+G+G FG V+KA+    GQ++A+K++   +   G         + L+  K+ 
Sbjct: 17  SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE 76

Query: 451 ------EIETSNSNATIGANVKAF-VREMKTFSDPTLSALL-HWEMRFN------IIIGI 496
                 EI  + ++         + V +   F +  L+ LL +  ++F       ++  +
Sbjct: 77  NVVNLIEICRTKASPYNRCKGSIYLVFD---FCEHDLAGLLSNVLVKFTLSEIKRVMQML 133

Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
             GL Y+H++   +I+HRD+K +N+L+ ++   K++DFGLA
Sbjct: 134 LNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLA 171

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 65.4 bits (160), Expect = 8e-12
 Identities = 33/173 (19%), Positives = 59/173 (34%), Gaps = 45/173 (26%)

Query: 413 LGKGGFGPVYKAK-FPGGQQIAVK-----RLSSASGQGLEEFKNEIETSNSNATIGANVK 466
           +GKG +G V  A         A+K     +L   +G            +           
Sbjct: 21  IGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPI 80

Query: 467 AFV-RE---MKTFSDPTLSALLH-WEMR-----------------FNIIIG--------- 495
             V +E   +K    P +  L+   +                     +            
Sbjct: 81  EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQAR 140

Query: 496 -----IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQ 543
                + +G+ YLH     +IIHRD+K SN+L+ ++ + KI+DFG++ +    
Sbjct: 141 FYFQDLIKGIEYLH---YQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGS 190

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 65.0 bits (159), Expect = 1e-11
 Identities = 38/170 (22%), Positives = 52/170 (30%), Gaps = 70/170 (41%)

Query: 412 KLGKGGFGPVYKA--KFPGGQQI--AVKRL---SSASGQGLEEFKNEIETSNSNATIGAN 464
           KLG G FG V +     P G+ +  AVK L     +  + +++F  E            N
Sbjct: 25  KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIRE-----------VN 73

Query: 465 VKAFVREMKTFSDP-------------------------------------TLSALLHWE 487
                  M +                                          L  L  + 
Sbjct: 74  A------MHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRY- 126

Query: 488 MRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
                 + +A G+ YL      R IHRDL   N+LL      KI DFGL 
Sbjct: 127 -----AVQVAEGMGYL---ESKRFIHRDLAARNLLLATRDLVKIGDFGLM 168

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 66.1 bits (161), Expect = 1e-11
 Identities = 33/175 (18%), Positives = 63/175 (36%), Gaps = 38/175 (21%)

Query: 396 DFESILAATDNFSEANKLGKG--GFGPVYKAKF-PGGQQIAVKR--LSSASGQGLEEFKN 450
              S L     +     +GKG      V  A++ P G+ + V+R  L + S + +   + 
Sbjct: 16  GMSSFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQG 75

Query: 451 EIETSNSNATIGANV----KAFVRE------------------MKTFSDPTLSALLHWEM 488
           E+  S        N+      F+ +                  + T     ++     E+
Sbjct: 76  ELHVSKLFNH--PNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMN-----EL 128

Query: 489 RFNIII-GIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD 542
               I+ G+ + L Y+H       +HR +K S+IL+  +    +S     L M+ 
Sbjct: 129 AIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMIS 180

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 65.4 bits (160), Expect = 2e-11
 Identities = 38/183 (20%), Positives = 69/183 (37%), Gaps = 41/183 (22%)

Query: 384 EEEKQGIDLPFIDFESILAATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQ 443
           ++  + I +   D ++       ++    +G G FG V++AK     ++A+K++      
Sbjct: 19  DDPNKVIKVLASDGKTGEQREIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQD--- 75

Query: 444 GLEEFKN-EIE-----------------TSNSNATIGANVKAFVREMKTFSDPTLSALLH 485
             + FKN E++                  SN +      +   V E   +   T+     
Sbjct: 76  --KRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN-LVLE---YVPETVYRASR 129

Query: 486 WEMRFNIIIG----------IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNP-KISDF 534
              +    +           + R L Y+H    + I HRD+K  N+LLD      K+ DF
Sbjct: 130 HYAKLKQTMPMLLIKLYMYQLLRSLAYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDF 186

Query: 535 GLA 537
           G A
Sbjct: 187 GSA 189

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 65.3 bits (159), Expect = 2e-11
 Identities = 30/177 (16%), Positives = 66/177 (37%), Gaps = 42/177 (23%)

Query: 405 DNFSEANKLGKGGFGPVYKAK-FPGGQQIAVKRLS-SASGQGLEEFKNEI---------- 452
             +  ++ LG+G    V++ +    G   A+K  +  +  + ++    E           
Sbjct: 9   HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKN 68

Query: 453 --------ETSNSNATI-------GANVKAFVREMKTFSDPTLSALLHWEMRFNIIIG-I 496
                   E + +   +         ++   + E    +   L      E  F I++  +
Sbjct: 69  IVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPS--NAYGLP-----ESEFLIVLRDV 121

Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILL----DQEMNPKISDFGLALDMMDQKLHASS 549
             G+ +L +     I+HR++K  NI+     D +   K++DFG A ++ D +   S 
Sbjct: 122 VGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSL 175

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 64.5 bits (158), Expect = 2e-11
 Identities = 34/168 (20%), Positives = 58/168 (34%), Gaps = 56/168 (33%)

Query: 405 DNFSEANKLGKGGFGPVYKAK-FPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGA 463
           + + +  K+G+G +G V+K +    GQ +A+K+           F    +          
Sbjct: 3   EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKK-----------FLESEDDPVIKKIA-- 49

Query: 464 NVKAFVRE---MKTFSDPTLSALL---HWEMRF--------------------------- 490
                +RE   +K    P L  LL     + R                            
Sbjct: 50  -----LREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLV 104

Query: 491 -NIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            +I     + + + H+      IHRD+K  NIL+ +    K+ DFG A
Sbjct: 105 KSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFA 149

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 64.3 bits (157), Expect = 2e-11
 Identities = 38/184 (20%), Positives = 60/184 (32%), Gaps = 62/184 (33%)

Query: 404 TDNFSEANKLGKGGFGPVYKA-KFPGGQQIAVKR--LSSASGQGLEEFKNEIET------ 454
           T  F E  K+G G FG V+K  K   G   A+KR     A     +    E+        
Sbjct: 10  TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 69

Query: 455 -SN---------------------SNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNI 492
            S+                     +  ++   +    R M  F +  L          ++
Sbjct: 70  HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELK---------DL 120

Query: 493 IIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNP-------------------KISD 533
           ++ + RGL Y+H      ++H D+K SNI + +   P                   KI D
Sbjct: 121 LLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGD 177

Query: 534 FGLA 537
            G  
Sbjct: 178 LGHV 181

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 65.5 bits (160), Expect = 2e-11
 Identities = 43/202 (21%), Positives = 71/202 (35%), Gaps = 50/202 (24%)

Query: 368 SARHVKDMVVDSDQFKEEEKQGIDLPFIDFESILAATDNFSEANKLGKGGFGPVYKAKF- 426
           SA     +  D D  K            D         ++++   +G G FG VY+AK  
Sbjct: 21  SAFGSMKVSRDKDGSKVTTVVATPGQGPDRPQ----EVSYTDTKVIGNGSFGVVYQAKLC 76

Query: 427 PGGQQIAVKRLSSASGQGLEEFKN-EIE-------------------TSNSNATIGANVK 466
             G+ +A+K++        + FKN E++                   +      +  N  
Sbjct: 77  DSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN-- 129

Query: 467 AFVREMKTFSDPTLSALLHWEMRFNIIIG----------IARGLLYLHQDSRLRIIHRDL 516
             V +   +   T+  +     R    +           + R L Y+H      I HRD+
Sbjct: 130 -LVLD---YVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS---FGICHRDI 182

Query: 517 KTSNILLDQEMNP-KISDFGLA 537
           K  N+LLD +    K+ DFG A
Sbjct: 183 KPQNLLLDPDTAVLKLCDFGSA 204

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 64.6 bits (158), Expect = 2e-11
 Identities = 41/171 (23%), Positives = 66/171 (38%), Gaps = 55/171 (32%)

Query: 413 LGKGGFGPVYKAK-FPGGQQIAVKRL--SSASGQGLEEFKNEIETSNSNATIGANVKAFV 469
           +GKG F  V  A+    G+++A+K +  +  +   L++   E+                 
Sbjct: 23  IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRI--------------- 67

Query: 470 REMKTFSDPTLSALLH-WEMR---------------FNIIIG---------------IAR 498
             MK  + P +  L    E                 F+ ++                I  
Sbjct: 68  --MKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVS 125

Query: 499 GLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD-QKLHAS 548
            + Y H   + RI+HRDLK  N+LLD +MN KI+DFG + +     KL A 
Sbjct: 126 AVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAF 173

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 65.2 bits (159), Expect = 2e-11
 Identities = 38/155 (24%), Positives = 67/155 (43%), Gaps = 32/155 (20%)

Query: 412 KLGKGGFGPVYKAK---FPGGQQIAVKRLS----SASGQG----LEEFKN-------EIE 453
           K+G+G +G VYKAK       +  A+K++     S S       L E K+       ++ 
Sbjct: 28  KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVF 87

Query: 454 TSNSNATI-------GANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQD 506
            S+++  +         ++   ++  +          L   M  +++  I  G+ YLH +
Sbjct: 88  LSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN 147

Query: 507 SRLRIIHRDLKTSNILLDQEMNP----KISDFGLA 537
               ++HRDLK +NIL+  E       KI+D G A
Sbjct: 148 ---WVLHRDLKPANILVMGEGPERGRVKIADMGFA 179

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 64.7 bits (158), Expect = 2e-11
 Identities = 46/170 (27%), Positives = 60/170 (35%), Gaps = 46/170 (27%)

Query: 411 NKLGKGGFGPVYKAKFPGG------QQIAVKRL-SSASGQGLEEFKNEIE---------- 453
             LG G FG VY+ +  G        Q+AVK L    S Q   +F  E            
Sbjct: 77  RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 136

Query: 454 -------TSNSNATI------GANVKAFVRE----MKTFSDPTLSALLHWEMRFNIIIGI 496
                    +    I      G ++K+F+RE        S   +  LLH      +   I
Sbjct: 137 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH------VARDI 190

Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLD---QEMNPKISDFGLALDMMDQ 543
           A G  YL        IHRD+   N LL         KI DFG+A D+   
Sbjct: 191 ACGCQYL---EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 237

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 63.8 bits (156), Expect = 2e-11
 Identities = 43/172 (25%), Positives = 62/172 (36%), Gaps = 56/172 (32%)

Query: 413 LGKGGFGPVYKAK-FPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVKAFVRE 471
           LG G FG V   +    G ++AVK L+          + +I + +    I        RE
Sbjct: 19  LGVGTFGKVKIGEHQLTGHKVAVKILN----------RQKIRSLDVVGKI-------KRE 61

Query: 472 ---MKTFSDPTLSALLH-WEMRFNIII----------------------GIAR------- 498
              +K F  P +  L        +  +                        AR       
Sbjct: 62  IQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQIL 121

Query: 499 -GLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGL-ALDMMDQKLHAS 548
             + Y H   R  ++HRDLK  N+LLD  MN KI+DFGL  +    + L  S
Sbjct: 122 SAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS 170

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 64.2 bits (157), Expect = 2e-11
 Identities = 35/164 (21%), Positives = 54/164 (32%), Gaps = 59/164 (35%)

Query: 413 LGKGGFGPVYKAK-FPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVKAFVRE 471
           LG+G +G V +        + AVK L           K ++          ANVK   +E
Sbjct: 13  LGEGSYGKVKEVLDSETLCRRAVKILK----------KKKL---RRIPNGEANVK---KE 56

Query: 472 ---MKTFSDPTLSALL---------------------HWEMRFNIIIG------------ 495
              ++      +  L+                       EM  + +              
Sbjct: 57  IQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEM-LDSVPEKRFPVCQAHGYF 115

Query: 496 --IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
             +  GL YLH      I+H+D+K  N+LL      KIS  G+A
Sbjct: 116 CQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVA 156

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 63.8 bits (156), Expect = 2e-11
 Identities = 30/153 (19%), Positives = 52/153 (33%), Gaps = 37/153 (24%)

Query: 411 NKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIET---------------- 454
             +GKG FG V    +  G ++AVK + +      + F  E                   
Sbjct: 27  QTIGKGEFGDVMLGDY-RGNKVAVKCIKN--DATAQAFLAEASVMTQLRHSNLVQLLGVI 83

Query: 455 SNSNATI--------GANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQD 506
                 +          ++  ++R     S      LL         + +   + YL   
Sbjct: 84  VEEKGGLYIVTEYMAKGSLVDYLRSRGR-SVLGGDCLLK------FSLDVCEAMEYL--- 133

Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLALD 539
                +HRDL   N+L+ ++   K+SDFGL  +
Sbjct: 134 EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKE 166

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 64.3 bits (157), Expect = 3e-11
 Identities = 46/170 (27%), Positives = 60/170 (35%), Gaps = 46/170 (27%)

Query: 411 NKLGKGGFGPVYKAKFPGG------QQIAVKRL-SSASGQGLEEFKNEIE---------- 453
             LG G FG VY+ +  G        Q+AVK L    S Q   +F  E            
Sbjct: 36  RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 95

Query: 454 -------TSNSNATI------GANVKAFVRE----MKTFSDPTLSALLHWEMRFNIIIGI 496
                    +    I      G ++K+F+RE        S   +  LLH      +   I
Sbjct: 96  VRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH------VARDI 149

Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQE---MNPKISDFGLALDMMDQ 543
           A G  YL        IHRD+   N LL         KI DFG+A D+   
Sbjct: 150 ACGCQYL---EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 196

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 63.8 bits (156), Expect = 3e-11
 Identities = 39/155 (25%), Positives = 63/155 (40%), Gaps = 29/155 (18%)

Query: 405 DNFSEANKLGKGGFGPVYKAKFPGGQQI-AVKRLSSASGQGLEEFKNEIETSNSNATIGA 463
           ++F     LG+G F  V  A+     +  A+K L       + + +N++        + +
Sbjct: 30  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRH---IIK-ENKVPYVTRERDVMS 85

Query: 464 NVK-AFVREMK-TFSDPT-------------LSALLHWEMRFNIIIG------IARGLLY 502
            +   F  ++  TF D               L   +     F+          I   L Y
Sbjct: 86  RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 145

Query: 503 LHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           LH      IIHRDLK  NILL+++M+ +I+DFG A
Sbjct: 146 LHG---KGIIHRDLKPENILLNEDMHIQITDFGTA 177

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 63.9 bits (156), Expect = 3e-11
 Identities = 40/169 (23%), Positives = 62/169 (36%), Gaps = 58/169 (34%)

Query: 412 KLGKGGFGPVYKA--KFPGGQQ---IAVKRL-SSASGQGLEEFKNEIETSNSNATIGANV 465
            +G G FG VYK   K   G++   +A+K L +  + +   +F  E       A I    
Sbjct: 51  VIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGE-------AGI---- 99

Query: 466 KAFVREMKTFSDPTLSAL--------------------------------LHWEMRFNII 493
                 M  FS   +  L                                        ++
Sbjct: 100 ------MGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGML 153

Query: 494 IGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD 542
            GIA G+ YL   + +  +HRDL   NIL++  +  K+SDFGL+  + D
Sbjct: 154 RGIAAGMKYL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLED 199

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 63.8 bits (156), Expect = 4e-11
 Identities = 42/171 (24%), Positives = 65/171 (38%), Gaps = 55/171 (32%)

Query: 413 LGKGGFGPVYKAK-FPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVKAFVRE 471
           LG+G FG V  A  +   Q++A+K +S          +  ++ S+ +  +        RE
Sbjct: 17  LGEGSFGKVKLATHYKTQQKVALKFIS----------RQLLKKSDMHMRV-------ERE 59

Query: 472 ---MKTFSDPTLSALLH-WEMR--------------FNIIIG---------------IAR 498
              +K    P +  L                     F+ I+                I  
Sbjct: 60  ISYLKLLRHPHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIIC 119

Query: 499 GLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGL-ALDMMDQKLHAS 548
            + Y H   R +I+HRDLK  N+LLD  +N KI+DFGL  +      L  S
Sbjct: 120 AIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTS 167

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 63.5 bits (155), Expect = 4e-11
 Identities = 32/172 (18%), Positives = 55/172 (31%), Gaps = 52/172 (30%)

Query: 413 LGKGGFGPVYKAK-FPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVKAFVRE 471
           LGKGGFG V+         Q+A+K +           +N +   +  +         V  
Sbjct: 39  LGKGGFGTVFAGHRLTDRLQVAIKVIP----------RNRVLGWSPLSDSV-TCPLEVAL 87

Query: 472 MKTFSD----PTLSALLHW-EMRFNIII-------G------------------------ 495
           +         P +  LL W E +   ++                                
Sbjct: 88  LWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQ 147

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNP-KISDFGLALDMMDQKLH 546
           +   + + H      ++HRD+K  NIL+D      K+ DFG    + D+   
Sbjct: 148 VVAAIQHCH---SRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYT 196

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 63.8 bits (156), Expect = 4e-11
 Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 3/40 (7%)

Query: 498 RGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           RGL +LH     R++HRDLK  NIL+      K++DFGLA
Sbjct: 131 RGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLA 167

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 63.8 bits (156), Expect = 4e-11
 Identities = 36/196 (18%), Positives = 62/196 (31%), Gaps = 60/196 (30%)

Query: 377 VDSDQFKEEEKQGIDLPFIDFESILAATDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVK 435
           +            +    + F+S+    + +     +G+G +G V K +    G+ +A+K
Sbjct: 1   MGHHHHHHSSGVDLGTENLYFQSM----EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIK 56

Query: 436 RLSSASGQGLEEFKNEIETSNSNATIGANVKAFVRE---MKTFSDPTLSALL---HWEMR 489
           +           F    +               +RE   +K      L  LL     + R
Sbjct: 57  K-----------FLESDDDKMVKKIA-------MREIKLLKQLRHENLVNLLEVCKKKKR 98

Query: 490 F----------------------------NIIIGIARGLLYLHQDSRLRIIHRDLKTSNI 521
           +                              +  I  G+ + H      IIHRD+K  NI
Sbjct: 99  WYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENI 155

Query: 522 LLDQEMNPKISDFGLA 537
           L+ Q    K+ DFG A
Sbjct: 156 LVSQSGVVKLCDFGFA 171

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 63.5 bits (155), Expect = 4e-11
 Identities = 35/170 (20%), Positives = 53/170 (31%), Gaps = 50/170 (29%)

Query: 413 LGKGGFGPVYKAK-FPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVKAFVRE 471
           LG GGFG VY          +A+K +           K+ I            V   V  
Sbjct: 51  LGSGGFGSVYSGIRVSDNLPVAIKHVE----------KDRISDWGELPNGT-RVPMEVVL 99

Query: 472 MKTFS--DPTLSALLHW-EMRFNIII------------------G-------------IA 497
           +K  S     +  LL W E   + ++                  G             + 
Sbjct: 100 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL 159

Query: 498 RGLLYLHQDSRLRIIHRDLKTSNILLDQE-MNPKISDFGLALDMMDQKLH 546
             + + H      ++HRD+K  NIL+D      K+ DFG    + D    
Sbjct: 160 EAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT 206

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 63.5 bits (155), Expect = 5e-11
 Identities = 32/161 (19%), Positives = 61/161 (37%), Gaps = 41/161 (25%)

Query: 411 NKLGKGGFGPVYKAKF-----PGGQQIAVKRLSSASG-QGLEEFKNEIET----SNSN-- 458
             LG G FG V+K  +          + +K +   SG Q  +   + +       +++  
Sbjct: 19  KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78

Query: 459 -----------------ATIGANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLL 501
                              +G ++   VR+ +         LL+W       + IA+G+ 
Sbjct: 79  RLLGLCPGSSLQLVTQYLPLG-SLLDHVRQHR--GALGPQLLLNW------GVQIAKGMY 129

Query: 502 YLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD 542
           YL       ++HR+L   N+LL      +++DFG+A  +  
Sbjct: 130 YL---EEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPP 167

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 64.5 bits (157), Expect = 6e-11
 Identities = 43/167 (25%), Positives = 69/167 (41%), Gaps = 32/167 (19%)

Query: 405 DNFSEANKLGKGGFGPVYKAKFPGGQQI-AVKRLSSASGQGLEEFKNEIETSNSNATIGA 463
           ++FS    +G+GGFG VY  +     ++ A+K L       ++  K     + +   + +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKR---IKM-KQGETLALNERIMLS 244

Query: 464 NVKA----FVREMK-TFSDPT-------------LSALLHWEMRFNI------IIGIARG 499
            V      F+  M   F  P              L   L     F+          I  G
Sbjct: 245 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG 304

Query: 500 LLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLH 546
           L ++H      +++RDLK +NILLD+  + +ISD GLA D   +K H
Sbjct: 305 LEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH 348

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 63.1 bits (154), Expect = 6e-11
 Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 39/155 (25%)

Query: 411 NKLGKGGFGPVYKAKF--PGGQQ---IAVKRL-SSASGQGLEEFKNEIE----------- 453
             LG G FG VYK  +   G +    +A+K L  + S +  +E  +E             
Sbjct: 21  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80

Query: 454 ------TSNSNATI-----GANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLY 502
                  +++   I        +  +VRE K   +     LL+W       + IA+G+ Y
Sbjct: 81  RLLGICLTSTVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNW------CVQIAKGMNY 132

Query: 503 LHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           L      R++HRDL   N+L+    + KI+DFGLA
Sbjct: 133 L---EDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 63.0 bits (154), Expect = 6e-11
 Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 3/40 (7%)

Query: 498 RGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           RGL +LH +    I+HRDLK  NIL+      K++DFGLA
Sbjct: 131 RGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGLA 167

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 64.1 bits (156), Expect = 7e-11
 Identities = 30/149 (20%), Positives = 50/149 (33%), Gaps = 30/149 (20%)

Query: 412 KLGKGGFGPVYKAK--FPGGQQIAVKRLSSASGQGLEE-FKNEIETSNSNATIG----AN 464
            +  GG G +Y A      G+ + +K L  +     +     E +     A +       
Sbjct: 87  CIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFL---AEVVHPSIVQ 143

Query: 465 VKAFVREMKTFSDP------------TLSALLH----WEMRFNIIIGIARGLLYLHQDSR 508
           +  FV       DP            +L                ++ I   L YLH    
Sbjct: 144 IFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQKLPVAEAIAYLLEILPALSYLH---S 200

Query: 509 LRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           + +++ DLK  NI+L +E   K+ D G  
Sbjct: 201 IGLVYNDLKPENIMLTEE-QLKLIDLGAV 228

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 63.6 bits (155), Expect = 9e-11
 Identities = 36/174 (20%), Positives = 57/174 (32%), Gaps = 55/174 (31%)

Query: 411 NKLGKGGFGPVYKAKFPG-GQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVKAFV 469
           +KLG G +G VY+  +      +AVK L   + + +EEF  E                  
Sbjct: 226 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV--------------- 269

Query: 470 REMKTFSDPTLSAL---------------------------------LHWEMRFNIIIGI 496
             MK    P L  L                                 +   +   +   I
Sbjct: 270 --MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 327

Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSK 550
           +  + YL    +   IHR+L   N L+ +    K++DFGL+  M      A + 
Sbjct: 328 SSAMEYL---EKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 378

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 62.4 bits (152), Expect = 1e-10
 Identities = 32/167 (19%), Positives = 55/167 (32%), Gaps = 47/167 (28%)

Query: 413 LGKGGFGPVYKAK-FPGGQQIAVKRLSSASGQGLEEFKNEI-ETSNSNATIGANVKAFVR 470
           LG G FG V+ A      +++ VK +           K ++ E           V   + 
Sbjct: 32  LGSGAFGFVWTAVDKEKNKEVVVKFIK----------KEKVLEDCWIEDPKLGKVTLEIA 81

Query: 471 EMKTFSDPTLSALLH-WEMRFNIII-------G------------------------IAR 498
            +       +  +L  +E +    +       G                        +  
Sbjct: 82  ILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVS 141

Query: 499 GLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKL 545
            + YL       IIHRD+K  NI++ ++   K+ DFG A  +   KL
Sbjct: 142 AVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKL 185

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 62.9 bits (153), Expect = 1e-10
 Identities = 45/168 (26%), Positives = 64/168 (38%), Gaps = 55/168 (32%)

Query: 413 LGKGGFGPVYKAK-FPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVKAFVRE 471
           LG G FG V   K    G ++AVK L+          + +I + +    I        RE
Sbjct: 24  LGVGTFGKVKVGKHELTGHKVAVKILN----------RQKIRSLDVVGKI-------RRE 66

Query: 472 ---MKTFSDPTLSALLH-WEMRFNIII----------------------GIAR------- 498
              +K F  P +  L        +I +                        +R       
Sbjct: 67  IQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQIL 126

Query: 499 -GLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKL 545
            G+ Y H   R  ++HRDLK  N+LLD  MN KI+DFGL+  M D + 
Sbjct: 127 SGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF 171

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 62.9 bits (153), Expect = 1e-10
 Identities = 47/190 (24%), Positives = 76/190 (40%), Gaps = 45/190 (23%)

Query: 381 QFKEEEKQGIDLPFIDFESILAATDNFSEANKLGKGGFGPVYKAKFPGGQQI-AVKRLSS 439
           Q+K  E Q +              D F +   LG+GGFG V+  +     ++ A K+L+ 
Sbjct: 173 QWKWLEAQPMGE------------DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNK 220

Query: 440 ASGQGLEEFKNEIETSNSNATIGANVKA-FVREMK-TFSDPT-----------------L 480
                L++ +   + +     I A V + F+  +   F   T                 +
Sbjct: 221 KR---LKK-RKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHI 276

Query: 481 SALLHWEMRFNI------IIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDF 534
             +      F           I  GL +LHQ     II+RDLK  N+LLD + N +ISD 
Sbjct: 277 YNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDL 333

Query: 535 GLALDMMDQK 544
           GLA+++   +
Sbjct: 334 GLAVELKAGQ 343

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 62.3 bits (152), Expect = 2e-10
 Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 2/43 (4%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNP-KISDFGLA 537
           + R +  LH  S + + HRD+K  N+L+++     K+ DFG A
Sbjct: 138 LIRSIGCLHLPS-VNVCHRDIKPHNVLVNEADGTLKLCDFGSA 179

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 61.1 bits (149), Expect = 2e-10
 Identities = 39/165 (23%), Positives = 53/165 (32%), Gaps = 53/165 (32%)

Query: 413 LGKGGFGPVYKAK-FPGGQQIAVKRLSSASGQGLEE-FKNEIETSNSNATIGANVKAFVR 470
           LG+G +G V  A      + +AVK +         E  K EI                  
Sbjct: 15  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICI---------------- 58

Query: 471 EMKTFSDPTLSALL-HWEMR---------------FNIIIGIAR---------------G 499
             K  +   +     H                   F+ I                    G
Sbjct: 59  -NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG 117

Query: 500 LLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQK 544
           ++YLH    + I HRD+K  N+LLD+  N KISDFGLA       
Sbjct: 118 VVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 159

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 60.7 bits (148), Expect = 2e-10
 Identities = 36/168 (21%), Positives = 56/168 (33%), Gaps = 55/168 (32%)

Query: 412 KLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVKAFVR 470
            +G+G +G V  A       + A K++     + ++ FK EIE                 
Sbjct: 16  TIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEI---------------- 59

Query: 471 EMKTFSDPTLSAL---------LHWEM----------------RFN------IIIGIARG 499
            MK+   P +  L         ++  M                 F       I+  +   
Sbjct: 60  -MKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSA 118

Query: 500 LLYLHQDSRLRIIHRDLKTSNILL---DQEMNPKISDFGLALDMMDQK 544
           + Y H+   L + HRDLK  N L      +   K+ DFGLA      K
Sbjct: 119 VAYCHK---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK 163

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 60.8 bits (148), Expect = 2e-10
 Identities = 27/180 (15%), Positives = 54/180 (30%), Gaps = 68/180 (37%)

Query: 412 KLGKGGFGPVYKAKF--------PGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGA 463
            LG+G F  ++K               ++ +K L  A     E F          A++  
Sbjct: 15  SLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEA-------ASM-- 65

Query: 464 NVKAFVREMKTFSDPTLSAL--------------------------------LHWEMRFN 491
                   M   S   L                                   ++   +  
Sbjct: 66  --------MSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLE 117

Query: 492 IIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNP--------KISDFGLALDMMDQ 543
           +   +A  + +L       +IH ++   NILL +E +         K+SD G+++ ++ +
Sbjct: 118 VAKQLAAAMHFL---EENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPK 174

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 60.3 bits (147), Expect = 3e-10
 Identities = 39/174 (22%), Positives = 59/174 (33%), Gaps = 55/174 (31%)

Query: 411 NKLGKGGFGPVYKAKFPGG-QQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVKAFV 469
           +KLG G +G VY+  +      +AVK L   + + +EEF  E           A V    
Sbjct: 19  HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKE-----------AAV---- 62

Query: 470 REMKTFSDPTLSAL---------------------------------LHWEMRFNIIIGI 496
             MK    P L  L                                 +   +   +   I
Sbjct: 63  --MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 120

Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSK 550
           +  + YL    +   IHRDL   N L+ +    K++DFGL+  M      A + 
Sbjct: 121 SSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 171

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 60.8 bits (148), Expect = 4e-10
 Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 7/53 (13%)

Query: 492 IIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQK 544
           ++ G+     YLH    + I HRD+K  N+LLD+  N KISDFGLA       
Sbjct: 114 LMAGVV----YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 159

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 60.0 bits (146), Expect = 6e-10
 Identities = 43/182 (23%), Positives = 71/182 (39%), Gaps = 29/182 (15%)

Query: 378 DSDQFKEEEKQGIDLPFIDFESILAATDNFSEANKLGKGGFGPVYKAKFPGGQQI-AVKR 436
              +F  + K+     +       A  D F     LG G FG V   K        A+K 
Sbjct: 14  SVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKI 73

Query: 437 LSSASGQGLEEFKNEIETSNSNATIGANVK-AFVREMK-TFSDPT-------------LS 481
           L     + ++    +IE + +   I   V   F+ +++ +F D +             + 
Sbjct: 74  LDKQ--KVVK--LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF 129

Query: 482 ALLHWEMRFNIIIG------IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFG 535
           + L    RF+          I     YLH    L +I+RDLK  N+L+DQ+   +++DFG
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFG 186

Query: 536 LA 537
            A
Sbjct: 187 FA 188

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 59.6 bits (145), Expect = 9e-10
 Identities = 36/167 (21%), Positives = 59/167 (35%), Gaps = 48/167 (28%)

Query: 412 KLGKGGFGPVYKAKFPG-GQQIAVK-----RLSSASGQGLEEFKNEIE----TSNSNATI 461
            +GKG F  V +      GQQ AVK     + +S+ G   E+ K E        + +  I
Sbjct: 31  VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPH--I 88

Query: 462 GANVKAFVREMKTFSDPT-----------------LSALLHWEMRF------NIIIGIAR 498
                  V  ++T+S                    +         +      + +  I  
Sbjct: 89  -------VELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILE 141

Query: 499 GLLYLHQDSRLRIIHRDLKTSNILL---DQEMNPKISDFGLALDMMD 542
            L Y H      IIHRD+K   +LL   +     K+  FG+A+ + +
Sbjct: 142 ALRYCHD---NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGE 185

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 60.2 bits (146), Expect = 1e-09
 Identities = 48/191 (25%), Positives = 75/191 (39%), Gaps = 53/191 (27%)

Query: 381 QFKEEEKQGIDLPFIDFESILAATDNFSEANKLGKGGFGPVYKAKFPGGQQI-AVKRLSS 439
           Q+K  E+Q +              + F +   LGKGGFG V   +     ++ A K+L  
Sbjct: 172 QWKWLERQPVTK------------NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEK 219

Query: 440 ASGQGLEEFKNEIETSNSNATIGANVKA-FVREMKTFSDPTLSAL-----------LHW- 486
                +++ +     + +   I   V + FV  +  ++  T  AL           L + 
Sbjct: 220 KR---IKK-RKGEAMALNEKQILEKVNSRFVVSLA-YAYETKDALCLVLTLMNGGDLKFH 274

Query: 487 ------------EMRF---NIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKI 531
                          F    I  G    L  LH   R RI++RDLK  NILLD   + +I
Sbjct: 275 IYHMGQAGFPEARAVFYAAEICCG----LEDLH---RERIVYRDLKPENILLDDHGHIRI 327

Query: 532 SDFGLALDMMD 542
           SD GLA+ + +
Sbjct: 328 SDLGLAVHVPE 338

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 59.6 bits (145), Expect = 1e-09
 Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 3/53 (5%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHAS 548
           +   L YL      RIIHRD+K  NILLD+  +  I+DF +A  +  +    +
Sbjct: 124 LVMALDYLQN---QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITT 173

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 58.4 bits (142), Expect = 1e-09
 Identities = 37/166 (22%), Positives = 59/166 (35%), Gaps = 44/166 (26%)

Query: 404 TDNFSEANKLGKGGFGPVYKAKFPG-GQQIAVKRLS-SASGQGLEEFKNEIET----SNS 457
            D F    KLG G FG V+  +    G +  +K ++   S   +E+ + EIE      + 
Sbjct: 21  DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHP 80

Query: 458 NATIGANVKAFVREMKTFSDPT-----------------LSALLHWEMRFN------III 494
           N  I       ++  + F D                   + +        +      ++ 
Sbjct: 81  N--I-------IKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMK 131

Query: 495 GIARGLLYLHQDSRLRIIHRDLKTSNILL---DQEMNPKISDFGLA 537
            +   L Y H      ++H+DLK  NIL          KI DFGLA
Sbjct: 132 QMMNALAYFHS---QHVVHKDLKPENILFQDTSPHSPIKIIDFGLA 174

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 58.8 bits (143), Expect = 1e-09
 Identities = 41/145 (28%), Positives = 64/145 (44%), Gaps = 23/145 (15%)

Query: 412 KLGKGGFGPVYKAKFPG-GQQIAVKRLS---SASGQGLEEFKNEIE--TSNSNATIGANV 465
           KLG GG   VY A+      ++A+K +        + L+ F+ E+   +  S+  I  ++
Sbjct: 18  KLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNI-VSM 76

Query: 466 KAFVRE-------MKTFSDPTLSALLH------WEMRFNIIIGIARGLLYLHQDSRLRII 512
                E       M+    PTLS  +        +   N    I  G+ + H    +RI+
Sbjct: 77  IDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAH---DMRIV 133

Query: 513 HRDLKTSNILLDQEMNPKISDFGLA 537
           HRD+K  NIL+D     KI DFG+A
Sbjct: 134 HRDIKPQNILIDSNKTLKIFDFGIA 158

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 58.7 bits (143), Expect = 2e-09
 Identities = 43/147 (29%), Positives = 61/147 (41%), Gaps = 29/147 (19%)

Query: 413 LGKGGFGPVYKAKFPGGQQI-AVKRLSSASGQGLEEFKNEIETSNSNATIGANVK-AFVR 470
           LG G FG V+  +     +  A+K L       +     ++E +N    + + V   F+ 
Sbjct: 14  LGTGSFGRVHLIRSRHNGRYYAMKVLKKE--IVVR--LKQVEHTNDERLMLSIVTHPFII 69

Query: 471 EMK-TFSDPT-------------LSALLHWEMRFNIIIG------IARGLLYLHQDSRLR 510
            M  TF D               L +LL    RF   +       +   L YLH      
Sbjct: 70  RMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHS---KD 126

Query: 511 IIHRDLKTSNILLDQEMNPKISDFGLA 537
           II+RDLK  NILLD+  + KI+DFG A
Sbjct: 127 IIYRDLKPENILLDKNGHIKITDFGFA 153

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 58.9 bits (143), Expect = 2e-09
 Identities = 32/175 (18%), Positives = 51/175 (29%), Gaps = 55/175 (31%)

Query: 404 TDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEE--FKNEIETSNSNATI 461
              ++    +  G +G V       G  +A+KR+ +    G       +           
Sbjct: 21  QSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC------- 73

Query: 462 GANVKAFVREMK---------------TFSDPTLSAL-------------LHWEMRFN-- 491
               K  +RE++                F      A+             L   +     
Sbjct: 74  ----KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRI 129

Query: 492 ---------IIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
                     +  I  GL  LH+     ++HRDL   NILL    +  I DF LA
Sbjct: 130 VISPQHIQYFMYHILLGLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLA 181

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 59.0 bits (143), Expect = 2e-09
 Identities = 46/253 (18%), Positives = 86/253 (33%), Gaps = 75/253 (29%)

Query: 381 QFKEEEKQGIDLPFIDFESILAATDNFSEANKLGKGGFGPVYKAK-FPGGQQIAVKRLSS 439
                   G +  +      +   DN+   + +G+G +G VY A      + +A+K+++ 
Sbjct: 2   HHHHHHSSGRENLYFQGIKNVHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNR 61

Query: 440 ASGQGLEEFKNEIETSNSNATIGANVKAFVREMK-----------------------TFS 476
                   F++ I+            K  +RE+                         F 
Sbjct: 62  M-------FEDLIDC-----------KRILREITILNRLKSDYIIRLYDLIIPDDLLKFD 103

Query: 477 D--------PT-LSALLHWEMRFN------IIIGIARGLLYLHQDSRLRIIHRDLKTSNI 521
           +         + L  L    +         I+  +  G  ++H      IIHRDLK +N 
Sbjct: 104 ELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIH--ES-GIIHRDLKPANC 160

Query: 522 LLDQEMNPKISDFGLALDMMDQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVV-- 579
           LL+Q+ + K+ DFGLA      +   S K   I+  +         + N +  ++  V  
Sbjct: 161 LLNQDCSVKVCDFGLA------RTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVT 214

Query: 580 -------IMLGSE 585
                  ++L  E
Sbjct: 215 RWYRAPELILLQE 227

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 58.2 bits (141), Expect = 3e-09
 Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 4/43 (9%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNP-KISDFGLA 537
           + R + ++H    L I HRD+K  N+L++ + N  K+ DFG A
Sbjct: 150 LFRAVGFIHS---LGICHRDIKPQNLLVNSKDNTLKLCDFGSA 189

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 58.2 bits (141), Expect = 3e-09
 Identities = 35/169 (20%), Positives = 57/169 (33%), Gaps = 55/169 (32%)

Query: 404 TDNFSEANKLGKGGFGPVYKAKFPG-GQQIAVKRLSSASGQGLEEFKNEIETSNSNATIG 462
            D +    +LG G FG V++      G+    K +++         KNEI          
Sbjct: 50  YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISI-------- 101

Query: 463 ANVKAFVREMKTFSDPTLSALL-HWEMRFNIII------G-------------------- 495
                    M     P L  L   +E ++ +++      G                    
Sbjct: 102 ---------MNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVI 152

Query: 496 -----IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNP--KISDFGLA 537
                   GL ++H+     I+H D+K  NI+ + +     KI DFGLA
Sbjct: 153 NYMRQACEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFGLA 198

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 57.7 bits (140), Expect = 3e-09
 Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 3/47 (6%)

Query: 491 NIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            I+  +   +  LH+   L I+HRDLK  NILLD +MN K++DFG +
Sbjct: 128 KIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFS 171

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 57.8 bits (140), Expect = 4e-09
 Identities = 39/233 (16%), Positives = 74/233 (31%), Gaps = 57/233 (24%)

Query: 344 TRRKRINSQGRSINRPNMAAPFYESARHVKDMVVDSDQFKEEEKQGIDLPFIDFESILAA 403
            R +R        + P+ +A     A+ + D      +    +  G +    D+ +    
Sbjct: 33  NREQRRAFIRSLRDDPSQSANLLAEAKKLNDAQPKGTENLYFQSMGPEDELPDWAAAKEF 92

Query: 404 TDNFSEANKLGKGGFGPVYKAKFPG-GQQIAVKRLSSASGQGLEEFKNEIETSNSNATIG 462
              +   + +G+G    V +      G + AVK +   + +   E   E+          
Sbjct: 93  YQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVR--------- 143

Query: 463 ANVKAFVREMK----------------TFSDPTLSALLHWEMR-------FNIIIG---- 495
              +A  RE                  ++   +    +            F+ +      
Sbjct: 144 ---EATRRETHILRQVAGHPHIITLIDSYESSSF---MFLVFDLMRKGELFDYLTEKVAL 197

Query: 496 -----------IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
                      +   + +LH      I+HRDLK  NILLD  M  ++SDFG +
Sbjct: 198 SEKETRSIMRSLLEAVSFLHA---NNIVHRDLKPENILLDDNMQIRLSDFGFS 247

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 57.3 bits (139), Expect = 4e-09
 Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 9/65 (13%)

Query: 479 TLSALLHWEMRF------NIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKIS 532
           TL  ++H E          +I    + L + H   +  IIHRD+K +NI++      K+ 
Sbjct: 102 TLRDIVHTEGPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVM 158

Query: 533 DFGLA 537
           DFG+A
Sbjct: 159 DFGIA 163

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 57.3 bits (139), Expect = 5e-09
 Identities = 36/173 (20%), Positives = 63/173 (36%), Gaps = 61/173 (35%)

Query: 404 TDNFSEANKLGKGGFGPVYKAK-FPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIG 462
              +     +G G +G V  A     G+++A+K+LS         F++EI          
Sbjct: 23  PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRP-------FQSEIFA-------- 67

Query: 463 ANVKAFVREMK------------------------TFSDPTL--------------SALL 484
              K   RE+                          F D  L                  
Sbjct: 68  ---KRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFS 124

Query: 485 HWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
             ++++ ++  + +GL Y+H      ++HRDLK  N+ ++++   KI DFGLA
Sbjct: 125 EEKIQY-LVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLA 173

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 57.8 bits (140), Expect = 5e-09
 Identities = 40/147 (27%), Positives = 61/147 (41%), Gaps = 28/147 (19%)

Query: 413 LGKGGFGPVYKAKFPGGQQI-AVKRLSSASGQGLEEFKNEIETSNSNATIGANVK-AFVR 470
           LGKG FG V   K     +  A+K L           K+E+  + +   +  N +  F+ 
Sbjct: 156 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVA----KDEVAHTLTENRVLQNSRHPFLT 211

Query: 471 EMK-TFSDPT-------------LSALLHWEMRFNI------IIGIARGLLYLHQDSRLR 510
            +K +F                 L   L  E  F+          I   L YLH  S   
Sbjct: 212 ALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH--SEKN 269

Query: 511 IIHRDLKTSNILLDQEMNPKISDFGLA 537
           +++RDLK  N++LD++ + KI+DFGL 
Sbjct: 270 VVYRDLKLENLMLDKDGHIKITDFGLC 296

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 57.9 bits (140), Expect = 6e-09
 Identities = 35/169 (20%), Positives = 58/169 (34%), Gaps = 55/169 (32%)

Query: 404 TDNFSEANKLGKGGFGPVYKAKFPG-GQQIAVKRLSSASGQGLEEFKNEIETSNSNATIG 462
            D++    +LG G FG V++      G   A K + +      E  + EI+T        
Sbjct: 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQT-------- 207

Query: 463 ANVKAFVREMKTFSDPTLSALL-HWEMRFNIII------G-------------------- 495
                    M     PTL  L   +E    +++      G                    
Sbjct: 208 ---------MSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAV 258

Query: 496 -----IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNP--KISDFGLA 537
                + +GL ++H+      +H DLK  NI+   + +   K+ DFGL 
Sbjct: 259 EYMRQVCKGLCHMHE---NNYVHLDLKPENIMFTTKRSNELKLIDFGLT 304

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 57.8 bits (140), Expect = 6e-09
 Identities = 43/167 (25%), Positives = 66/167 (39%), Gaps = 48/167 (28%)

Query: 404 TDNFSEANKLGKGGFGPVYKAKFPG-GQQIAVKRLSSA---SGQGLEEFKNEIET----S 455
           +D +     LGKG FG V   K    GQ+ AVK +S          E    E++      
Sbjct: 25  SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84

Query: 456 NSNATIGANVKAFVREMKTFSDPTLSALLHWEM----------------RFN------II 493
           + N  I       ++  + F D       +                   RF+      II
Sbjct: 85  HPN--I-------MKLYEFFEDKGY---FYLVGEVYTGGELFDEIISRKRFSEVDAARII 132

Query: 494 IGIARGLLYLHQDSRLRIIHRDLKTSNILL---DQEMNPKISDFGLA 537
             +  G+ Y+H+    +I+HRDLK  N+LL    ++ N +I DFGL+
Sbjct: 133 RQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLS 176

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 57.0 bits (138), Expect = 7e-09
 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 10/60 (16%)

Query: 492 IIIGIARGLLYLHQDSRLRIIHRDLKTSNILLD--QEMNPKISDFGL-ALDMMDQKLHAS 548
           ++ G++    Y H    ++I HRDLK  N LLD       KI DFG     ++  +  ++
Sbjct: 125 LLSGVS----YCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST 177

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 56.1 bits (136), Expect = 1e-08
 Identities = 33/161 (20%), Positives = 54/161 (33%), Gaps = 55/161 (34%)

Query: 412 KLGKGGFGPVYKAKFPG-GQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVKAFVR 470
            +G+GG G VY+A+     + +A+K +S       E   ++                  R
Sbjct: 41  LVGRGGMGDVYEAEDTVRERIVALKLMS-------ETLSSDPVF----------RTRMQR 83

Query: 471 EMKT---FSDP-------------------------TLSALLHWEMRF------NIIIGI 496
           E +T     +P                          L+A+L  +          I+  I
Sbjct: 84  EARTAGRLQEPHVVPIHDFGEIDGQLYVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQI 143

Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
              L   H        HRD+K  NIL+  +    + DFG+A
Sbjct: 144 GSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIA 181

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 56.5 bits (137), Expect = 1e-08
 Identities = 37/171 (21%), Positives = 65/171 (38%), Gaps = 41/171 (23%)

Query: 394 FIDFESIL---AATDNFSEANKLGKGGFGPVYKAK-FPGGQQIAVKRLSSASGQG----- 444
           + D+ES +      D++    KLG+G +  V++A      +++ VK L     +      
Sbjct: 22  YWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREI 81

Query: 445 --LEEFKNEIETSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMR--FNIIIG----- 495
             LE  +            G N+      +K     T + +        F  +       
Sbjct: 82  KILENLRG-----------GPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDY 130

Query: 496 --------IARGLLYLHQDSRLRIIHRDLKTSNILLDQE-MNPKISDFGLA 537
                   I + L Y H  S   I+HRD+K  N+++D E    ++ D+GLA
Sbjct: 131 DIRFYMYEILKALDYCH--SM-GIMHRDVKPHNVMIDHEHRKLRLIDWGLA 178

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 56.7 bits (137), Expect = 1e-08
 Identities = 39/203 (19%), Positives = 75/203 (36%), Gaps = 47/203 (23%)

Query: 367 ESARHVKDMVVDSDQFKEEEKQ---GIDLPFIDFESILAATDNFSEANKLGKGGFGPVYK 423
              +++ + +  +  F  + KQ     +    DFE +            +G+G FG V  
Sbjct: 47  RREKNILEYLEWAKPFTSKVKQMRLHRE----DFEIL----------KVIGRGAFGEVAV 92

Query: 424 AKFPGGQQI-AVKRLSSASGQGLEEFKNEIETSNSNATIGANVKA-FVREMK-TFSDPT- 479
            K     ++ A+K L+          + E         +  N  + ++  +   F D   
Sbjct: 93  VKLKNADKVFAMKILNKWEMLK----RAETACFREERDVLVNGDSKWITTLHYAFQDDNN 148

Query: 480 -------------LSALLHWEMRFNI------IIGIARGLLYLHQDSRLRIIHRDLKTSN 520
                        L+ L  +E R         +  +   +  +HQ   L  +HRD+K  N
Sbjct: 149 LYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDN 205

Query: 521 ILLDQEMNPKISDFGLALDMMDQ 543
           IL+D   + +++DFG  L +M+ 
Sbjct: 206 ILMDMNGHIRLADFGSCLKLMED 228

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 56.2 bits (136), Expect = 1e-08
 Identities = 46/188 (24%), Positives = 67/188 (35%), Gaps = 64/188 (34%)

Query: 406 NFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGAN 464
             S+   LG G FG V+K +    G ++A K + +   +  EE KNEI            
Sbjct: 90  TVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISV---------- 139

Query: 465 VKAFVREMKTFSDPTLSALL-HWEMRFNIII------G-------IARG----------- 499
                  M       L  L   +E + +I++      G       I              
Sbjct: 140 -------MNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILF 192

Query: 500 -------LLYLHQDSRLRIIHRDLKTSNILL-DQEMNP-KISDFGLALDMMDQKLHASSK 550
                  + ++HQ   + I+H DLK  NIL  +++    KI DFGLA            K
Sbjct: 193 MKQICEGIRHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRY---------K 240

Query: 551 PNEILKCI 558
           P E LK  
Sbjct: 241 PREKLKVN 248

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 55.9 bits (135), Expect = 2e-08
 Identities = 33/166 (19%), Positives = 69/166 (41%), Gaps = 28/166 (16%)

Query: 405 DNFSEANKLGKGGFGPVYKAKFPGGQQI-AVKRLSSASGQGLEEFKNEIETSNSNATIGA 463
           +++     +G+G FG V   +    +++ A+K LS    + ++  +++         I A
Sbjct: 69  EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKF--EMIK--RSDSAFFWEERDIMA 124

Query: 464 NVKA-FVREMK-TFSDPTL----------SALLHWEMRFNIIIGIAR--------GLLYL 503
              + +V ++   F D               L++    +++    AR         L  +
Sbjct: 125 FANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAI 184

Query: 504 HQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASS 549
           H    +  IHRD+K  N+LLD+  + K++DFG  + M  + +    
Sbjct: 185 HS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCD 227

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 54.9 bits (133), Expect = 2e-08
 Identities = 43/171 (25%), Positives = 64/171 (37%), Gaps = 57/171 (33%)

Query: 404 TDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRL--SSASGQGLEEFKNEIETSNSNAT 460
            + ++    LGKG FG V K K     Q+ AVK +  +SA  +       E         
Sbjct: 21  AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILRE--------- 71

Query: 461 IGANVKAFVREMKTFSDPTLSAL---------LHWEM----------------RFN---- 491
                   V  +K    P +  L          +                   RF+    
Sbjct: 72  --------VELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDA 123

Query: 492 --IIIGIARGLLYLHQDSRLRIIHRDLKTSNILL---DQEMNPKISDFGLA 537
             II  +  G+ Y+H+     I+HRDLK  NILL   +++ + KI DFGL+
Sbjct: 124 ARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLS 171

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 55.3 bits (134), Expect = 2e-08
 Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 3/42 (7%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
             R +  LH  +   +IHRDLK SN+L++   + K+ DFGLA
Sbjct: 121 TLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLA 159

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 55.4 bits (134), Expect = 2e-08
 Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 32/158 (20%)

Query: 404 TDNFSEANKLGKGGFGPVYKAK-FPGGQQIAVKRLSSASGQG-----------LEEFKNE 451
              ++  + +G+G +G V  A       ++A+K++S    Q            L  F++E
Sbjct: 26  GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 85

Query: 452 IETSNSNATIGANVKAF-----VRE-MKTFSDPTLSALLHWE------MRFNIIIGIARG 499
                ++      ++       V++ M+T  D  L  LL  +      + +  +  I RG
Sbjct: 86  NIIGINDIIRAPTIEQMKDVYIVQDLMET--D--LYKLLKTQHLSNDHICY-FLYQILRG 140

Query: 500 LLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           L Y+H  S   ++HRDLK SN+LL+   + KI DFGLA
Sbjct: 141 LKYIH--SA-NVLHRDLKPSNLLLNTTCDLKICDFGLA 175

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 55.5 bits (134), Expect = 2e-08
 Identities = 39/173 (22%), Positives = 58/173 (33%), Gaps = 61/173 (35%)

Query: 404 TDNFSEANKLGKGGFGPVYKAK-FPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIG 462
              +     +G G  G V  A      + +A+K+LS         F+N+           
Sbjct: 24  LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP-------FQNQTHA-------- 68

Query: 463 ANVKAFVREMK------------------------TFSDPTL--------------SALL 484
              K   RE+                          F D  +                L 
Sbjct: 69  ---KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD 125

Query: 485 HWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           H  M + ++  +  G+ +LH      IIHRDLK SNI++  +   KI DFGLA
Sbjct: 126 HERMSY-LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA 174

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 55.5 bits (134), Expect = 2e-08
 Identities = 42/179 (23%), Positives = 70/179 (39%), Gaps = 61/179 (34%)

Query: 395 IDFESILAATDNFSEANKLGKGGFGPVYKAK-FPGGQQIAVKRLSSASGQGLEEFKNEIE 453
           +D          +    KLGKG +G V+K+     G+ +AVK++  A       F+N  +
Sbjct: 3   VDRH----VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDA-------FQNSTD 51

Query: 454 TSNSNATIGANVKAFVREMK---------------------TFSD-----PTLSALLHWE 487
                       +   RE+                         D       +   LH  
Sbjct: 52  A-----------QRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYMETDLHAV 100

Query: 488 MRFN---------IIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           +R N         ++  + + + YLH  S   ++HRD+K SNILL+ E + K++DFGL+
Sbjct: 101 IRANILEPVHKQYVVYQLIKVIKYLH--SG-GLLHRDMKPSNILLNAECHVKVADFGLS 156

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 55.5 bits (134), Expect = 3e-08
 Identities = 33/160 (20%), Positives = 63/160 (39%), Gaps = 30/160 (18%)

Query: 405 DNFSEANKLGKGGFGPVYKAKFPGGQQI-AVKRLSSASGQGLEEFKNEIETSNSNATIGA 463
           D+F     +G+G F  V   K     Q+ A+K ++      + + + E+        +  
Sbjct: 61  DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWD---MLK-RGEVSCFREERDVLV 116

Query: 464 NVKA-FVREMK-TFSDPT--------------LSALLHWEMRFNI------IIGIARGLL 501
           N    ++ ++   F D                L+ L  +  R         +  I   + 
Sbjct: 117 NGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAID 176

Query: 502 YLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMM 541
            +H+   L  +HRD+K  NILLD+  + +++DFG  L + 
Sbjct: 177 SVHR---LGYVHRDIKPDNILLDRCGHIRLADFGSCLKLR 213

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 55.4 bits (134), Expect = 3e-08
 Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 3/42 (7%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           I RGL Y+H      IIHRDLK SN+ ++++   KI DFGLA
Sbjct: 141 ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA 179

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 54.5 bits (131), Expect = 4e-08
 Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 5/49 (10%)

Query: 491 NIIIGIARGLLYLHQDSRLRIIHRDLKTSNILL--DQEMNPKISDFGLA 537
           NI+  I   L YLH      I HRD+K  N L   ++    K+ DFGL+
Sbjct: 172 NIMRQIFSALHYLHN---QGICHRDIKPENFLFSTNKSFEIKLVDFGLS 217

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 55.1 bits (133), Expect = 4e-08
 Identities = 40/172 (23%), Positives = 66/172 (38%), Gaps = 48/172 (27%)

Query: 404 TDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIG 462
            +++ +  KLG G +G V   K   G  + A+K +  +         ++   S+ N  I 
Sbjct: 35  GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQ-------FDKGRYSDDNKNIE 87

Query: 463 ANVKAFVRE---MKTFSDPTLSALLHW-------------------------EMRFN--- 491
              +    E   +K+   P +  L                              +F+   
Sbjct: 88  KFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECD 147

Query: 492 ---IIIGIARGLLYLHQDSRLRIIHRDLKTSNILL---DQEMNPKISDFGLA 537
              I+  I  G+ YLH+     I+HRD+K  NILL   +  +N KI DFGL+
Sbjct: 148 AANIMKQILSGICYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLS 196

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 54.6 bits (132), Expect = 5e-08
 Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 3/42 (7%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           + +GL Y+H      IIHRDLK  N+ ++++   KI DFGLA
Sbjct: 137 MLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLA 175

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 53.7 bits (130), Expect = 6e-08
 Identities = 25/54 (46%), Positives = 36/54 (66%), Gaps = 3/54 (5%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASS 549
           +A  L +LH    L II+RDLK  NILLD+E + K++DFGL+ + +D +  A S
Sbjct: 135 LALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS 185

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 54.5 bits (131), Expect = 6e-08
 Identities = 38/161 (23%), Positives = 62/161 (38%), Gaps = 37/161 (22%)

Query: 404 TDNFSEANKLGKGGFGPVYKAK-FPGGQQIAVKRLSSASGQGLEEFKNEIET-------- 454
              +     +G G  G V  A      + +A+K+LS         F+N+           
Sbjct: 61  LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-------FQNQTHAKRAYRELV 113

Query: 455 -----SNSNATIGANVKAFVREMKTFSD-----PTLSALLHWEMRFN--------IIIGI 496
                ++ N     NV    + ++ F D       + A L   ++          ++  +
Sbjct: 114 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQM 173

Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
             G+ +LH      IIHRDLK SNI++  +   KI DFGLA
Sbjct: 174 LCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLA 211

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 53.9 bits (130), Expect = 6e-08
 Identities = 36/171 (21%), Positives = 63/171 (36%), Gaps = 43/171 (25%)

Query: 404 TDNFSEANKLGKGGFGPVYKAKFPG-GQQIAVKRL--SSASGQGLEEFKNEIE--TSNSN 458
           +DN+    +LGKG F  V +      G + A K +     S +  ++ + E        +
Sbjct: 28  SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87

Query: 459 ATIGANVKAFVREMKTFSDPTLSALLHWEMR-------FNIIIG---------------I 496
             I       VR   +  + +     +           F  I+                I
Sbjct: 88  PNI-------VRLHDSIQEESF---HYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI 137

Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNP---KISDFGLALDMMDQK 544
              + Y H      I+HR+LK  N+LL  +      K++DFGLA+++ D +
Sbjct: 138 LESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE 185

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 53.8 bits (130), Expect = 7e-08
 Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 4/55 (7%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA-LDMMDQKLHASS 549
           I   L +LH+   L II+RD+K  NILLD   +  ++DFGL+   + D+   A  
Sbjct: 168 IVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYD 219

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 53.7 bits (130), Expect = 8e-08
 Identities = 19/42 (45%), Positives = 28/42 (66%), Gaps = 3/42 (7%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           I+  L +LHQ     II+RDLK  NI+L+ + + K++DFGL 
Sbjct: 130 ISMALGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLC 168

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 53.4 bits (129), Expect = 8e-08
 Identities = 37/147 (25%), Positives = 60/147 (40%), Gaps = 29/147 (19%)

Query: 413 LGKGGFGPVYKAKFPGGQQI-AVKRLSSASGQGLEEFKNEIETSNSNATIGANVK-AFVR 470
           LGKG FG V   +     +  A+K L       +   K+E+  + + + +  N +  F+ 
Sbjct: 13  LGKGTFGKVILVREKATGRYYAMKILRKEV---IIA-KDEVAHTVTESRVLQNTRHPFLT 68

Query: 471 EMK-TFSDPT-------------LSALLHWEMRFNI------IIGIARGLLYLHQDSRLR 510
            +K  F                 L   L  E  F           I   L YLH      
Sbjct: 69  ALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS---RD 125

Query: 511 IIHRDLKTSNILLDQEMNPKISDFGLA 537
           +++RD+K  N++LD++ + KI+DFGL 
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLC 152

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 53.8 bits (130), Expect = 8e-08
 Identities = 21/42 (50%), Positives = 27/42 (64%), Gaps = 3/42 (7%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           IA  L YLH    L I++RDLK  NILLD + +  ++DFGL 
Sbjct: 148 IASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLC 186

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 53.4 bits (128), Expect = 9e-08
 Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 3/48 (6%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQ 543
           +A+G+ +L   +  + IHRDL   NILL ++   KI DFGLA D+   
Sbjct: 202 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 246

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 53.3 bits (127), Expect = 1e-07
 Identities = 29/203 (14%), Positives = 54/203 (26%), Gaps = 64/203 (31%)

Query: 395 IDFESILAATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRL--------SSASGQGLE 446
           + F   L  T+      K+G+G FG V++        +A+K +        + +  +  E
Sbjct: 11  VPFSHCLP-TEKLQRCEKIGEGVFGEVFQTIAD-HTPVAIKIIAIEGPDLVNGSHQKTFE 68

Query: 447 EFKNEIE---------------TSNSNATIGANV------KAFVREMKTFS--------- 476
           E   EI                T         +          ++    ++         
Sbjct: 69  EILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDR 128

Query: 477 ---------------DPTLSALLHWEMRFN-------IIIGIARGLLYLHQDSRLRIIHR 514
                          +     L     + +       I+  +   L        LR  HR
Sbjct: 129 PDFFKDDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAEA--SLRFEHR 186

Query: 515 DLKTSNILLDQEMNPKISDFGLA 537
           DL   N+LL +    K+      
Sbjct: 187 DLHWGNVLLKKTSLKKLHYTLNG 209

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 53.2 bits (128), Expect = 1e-07
 Identities = 33/171 (19%), Positives = 62/171 (36%), Gaps = 52/171 (30%)

Query: 412 KLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVKAFVR 470
            LG G  G V  A      +++A++ +S          K +    ++             
Sbjct: 142 TLGSGACGEVKLAFERKTCKKVAIRIIS----------KRKFAIGSAREA--DPALNVET 189

Query: 471 E---MKTFSDPTLSALL-HWEMR--------------FNIIIG---------------IA 497
           E   +K  + P +  +   ++                F+ ++G               + 
Sbjct: 190 EIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 249

Query: 498 RGLLYLHQDSRLRIIHRDLKTSNILL---DQEMNPKISDFGLALDMMDQKL 545
             + YLH+     IIHRDLK  N+LL   +++   KI+DFG +  + +  L
Sbjct: 250 LAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 297

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 53.0 bits (128), Expect = 1e-07
 Identities = 20/42 (47%), Positives = 27/42 (64%), Gaps = 3/42 (7%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           IA GL +L       II+RDLK  N++LD E + KI+DFG+ 
Sbjct: 130 IAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMC 168

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 52.7 bits (127), Expect = 1e-07
 Identities = 34/179 (18%), Positives = 62/179 (34%), Gaps = 52/179 (29%)

Query: 404 TDNFSEANKLGKGGFGPVYKAK-FPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIG 462
            D +  +  LG G  G V  A      +++A+K +S          + +           
Sbjct: 9   RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREAD----------- 57

Query: 463 ANVKAFVRE---MKTFSDPTLSAL--------LHWEMR-------FNIIIG--------- 495
                   E   +K  + P +  +         +  +        F+ ++G         
Sbjct: 58  -PALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATC 116

Query: 496 ------IARGLLYLHQDSRLRIIHRDLKTSNILL---DQEMNPKISDFGLALDMMDQKL 545
                 +   + YLH      IIHRDLK  N+LL   +++   KI+DFG +  + +  L
Sbjct: 117 KLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 172

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 53.0 bits (128), Expect = 1e-07
 Identities = 19/42 (45%), Positives = 28/42 (66%), Gaps = 3/42 (7%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           I+  L YLH+     II+RDLK  N+LLD E + K++D+G+ 
Sbjct: 119 ISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMC 157

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 52.6 bits (127), Expect = 1e-07
 Identities = 41/169 (24%), Positives = 58/169 (34%), Gaps = 48/169 (28%)

Query: 404 TDNFSEANKLGKGGFGPVYKAKFPG-GQQIAVK------RLSSASGQGLEEFKNEIETSN 456
            D +    +LG G F  V K +    G + A K        +S  G   EE + E+    
Sbjct: 11  EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILR 70

Query: 457 SNATIGANVKAFVREMKTFSDPTLSAL---------LHWEMRFNIIIG------------ 495
                  NV   +     + + T   L         L     F+ +              
Sbjct: 71  QVL--HHNV---ITLHDVYENRTDVVLILELVSGGEL-----FDFLAQKESLSEEEATSF 120

Query: 496 ---IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNP----KISDFGLA 537
              I  G+ YLH     +I H DLK  NI+L  +  P    K+ DFGLA
Sbjct: 121 IKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 52.7 bits (127), Expect = 1e-07
 Identities = 32/162 (19%), Positives = 63/162 (38%), Gaps = 31/162 (19%)

Query: 404 TDNFSEANKLGKGGFGPVYKAK-FPGGQQIAVKRLSSASGQG----------LEEFKNE- 451
              + +   LG GG G V+ A      +++A+K++     Q           +    ++ 
Sbjct: 10  GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDN 69

Query: 452 -IETSNSNATIGANVKAFVREMKTFSD-----PTLSALLHWEMRFN---------IIIGI 496
            ++        G+ +   V  +   +        +   L   +             +  +
Sbjct: 70  IVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQL 129

Query: 497 ARGLLYLHQDSRLRIIHRDLKTSNILLDQE-MNPKISDFGLA 537
            RGL Y+H  +   ++HRDLK +N+ ++ E +  KI DFGLA
Sbjct: 130 LRGLKYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLA 168

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 53.1 bits (128), Expect = 1e-07
 Identities = 19/42 (45%), Positives = 28/42 (66%), Gaps = 3/42 (7%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           I+  L YLH+     II+RDLK  N+LLD E + K++D+G+ 
Sbjct: 162 ISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMC 200

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 52.6 bits (127), Expect = 2e-07
 Identities = 30/190 (15%), Positives = 53/190 (27%), Gaps = 65/190 (34%)

Query: 404 TDNFSEANKLGKGGFGPVYKAKFPG-GQQIAVKRLSSASGQGLEEFKNEIETSNSNATIG 462
            + +  A  LG+G FG V++       +    K +    G      K EI          
Sbjct: 4   YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFV-KVKGTDQVLVKKEISI-------- 54

Query: 463 ANVKAFVREMKTFSDPTLSALL-HWEMRFNIII------G-------IARG--------- 499
                    +       +  L   +E    +++      G                    
Sbjct: 55  ---------LNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIV 105

Query: 500 ---------LLYLHQDSRLRIIHRDLKTSNILLDQEMNP--KISDFGLALDMMDQKLHAS 548
                    L +LH      I H D++  NI+     +   KI +FG A  +        
Sbjct: 106 SYVHQVCEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQL-------- 154

Query: 549 SKPNEILKCI 558
            KP +  + +
Sbjct: 155 -KPGDNFRLL 163

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 52.6 bits (127), Expect = 2e-07
 Identities = 20/42 (47%), Positives = 28/42 (66%), Gaps = 3/42 (7%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           I  GL +LH      I++RDLK  NILLD++ + KI+DFG+ 
Sbjct: 127 IILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMC 165

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 52.6 bits (127), Expect = 2e-07
 Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 3/42 (7%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           I   L++LH      II+RDLK  N+LLD E + K++DFG+ 
Sbjct: 133 IISALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMC 171

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 50.7 bits (122), Expect = 5e-07
 Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 6/45 (13%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILL---DQEMNPKISDFGLA 537
           +A  L +LH      I HRDLK  NIL    +Q    KI DF L 
Sbjct: 120 VASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICDFDLG 161

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 51.6 bits (123), Expect = 5e-07
 Identities = 20/42 (47%), Positives = 27/42 (64%), Gaps = 3/42 (7%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           IA GL +L       II+RDLK  N++LD E + KI+DFG+ 
Sbjct: 451 IAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMC 489

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 50.8 bits (122), Expect = 6e-07
 Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 7/51 (13%)

Query: 491 NIIIGIARGLLYLHQDSRLRIIHRDLKTSNILL-DQEMNP---KISDFGLA 537
            ++  I + + YLH      ++HRDLK SNIL  D+  NP   +I DFG A
Sbjct: 120 AVLFTITKTVEYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFA 167

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 50.8 bits (122), Expect = 8e-07
 Identities = 37/166 (22%), Positives = 62/166 (37%), Gaps = 47/166 (28%)

Query: 404 TDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRL--SSASGQGLEEFKNEIETSNSNAT 460
           T+ +    +LGKG F  V +      GQ+ A   +     S +  ++ + E         
Sbjct: 10  TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREAR------- 62

Query: 461 IGANVK--AFVREMKTFSDPTLSALLHWEMR-------FNIIIGIARG------------ 499
           I   +K    VR   + S+       +           F  I  +AR             
Sbjct: 63  ICRLLKHPNIVRLHDSISEEG---HHYLIFDLVTGGELFEDI--VAREYYSEADASHCIQ 117

Query: 500 -----LLYLHQDSRLRIIHRDLKTSNILL---DQEMNPKISDFGLA 537
                +L+ HQ   + ++HR+LK  N+LL    +    K++DFGLA
Sbjct: 118 QILEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLA 160

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 50.4 bits (121), Expect = 8e-07
 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 6/54 (11%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILL---DQEMNPKISDFGLALDMMDQKLH 546
           I   + +LH      I HRD+K  N+L    +++   K++DFG A +     L 
Sbjct: 137 IGTAIQFLHS---HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQ 187

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 49.9 bits (120), Expect = 8e-07
 Identities = 39/176 (22%), Positives = 62/176 (35%), Gaps = 62/176 (35%)

Query: 404 TDNFSEANKLGKGGFGPVYKAKFPG-GQQIAVK------RLSSASGQGLEEFKNEIETSN 456
            D++    +LG G F  V K +  G G++ A K        SS  G   EE + E+    
Sbjct: 4   EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNI-- 61

Query: 457 SNATIGANVKAFVREMKTFSDPTLSALL-HWEMRFNIII-------G------IARG--- 499
                          ++    P +  L   +E + ++++       G        +    
Sbjct: 62  ---------------LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLT 106

Query: 500 --------------LLYLHQDSRLRIIHRDLKTSNILLDQEMNP----KISDFGLA 537
                         + YLH     RI H DLK  NI+L  +  P    K+ DFG+A
Sbjct: 107 EDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 159

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 50.3 bits (121), Expect = 8e-07
 Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 6/59 (10%)

Query: 491 NIIIGIARGLLYLHQDSRLRIIHRDLKTSNILL---DQEMNPKISDFGLALDMMDQKLH 546
            +I  +   + YLH+     I+HRDLK  N+L    ++     I+DFGL+    +  + 
Sbjct: 110 LVIQQVLSAVKYLHE---NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMS 165

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 50.3 bits (121), Expect = 9e-07
 Identities = 42/176 (23%), Positives = 60/176 (34%), Gaps = 62/176 (35%)

Query: 404 TDNFSEANKLGKGGFGPVYKAKFPG-GQQIAVKRL------SSASGQGLEEFKNEIETSN 456
            D +    +LG G F  V K +    G Q A K +      SS  G   E+ + E+    
Sbjct: 10  DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI-- 67

Query: 457 SNATIGANVKAFVREMKTFSDPTLSALL-HWEMRFNIII------G-------IARG--- 499
                          +K    P +  L   +E + ++I+      G         +    
Sbjct: 68  ---------------LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLT 112

Query: 500 --------------LLYLHQDSRLRIIHRDLKTSNILLDQEMNP----KISDFGLA 537
                         + YLH    L+I H DLK  NI+L     P    KI DFGLA
Sbjct: 113 EEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 49.9 bits (120), Expect = 9e-07
 Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 6/57 (10%)

Query: 491 NIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNP---KISDFGLALDMMDQK 544
           + I  I   + Y H      I+HR+LK  N+LL  +      K++DFGLA+++ D +
Sbjct: 109 HCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE 162

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 50.1 bits (120), Expect = 1e-06
 Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 6/57 (10%)

Query: 491 NIIIGIARGLLYLHQDSRLRIIHRDLKTSNILL---DQEMNPKISDFGLALDMMDQK 544
            II  +  G+ YLH+     I+HRDLK  N+LL   +++   KI DFGL+    +QK
Sbjct: 140 VIIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK 193

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 49.2 bits (118), Expect = 1e-06
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 6/50 (12%)

Query: 491 NIIIGIARGLLYLHQDSRLRIIHRDLKTSNILL---DQEMNPKISDFGLA 537
            I+  I   + YLH    + I HRD+K  N+L          K++DFG A
Sbjct: 121 EIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 49.6 bits (119), Expect = 2e-06
 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 6/50 (12%)

Query: 491 NIIIGIARGLLYLHQDSRLRIIHRDLKTSNILL---DQEMNPKISDFGLA 537
            I+  +   + ++H    + ++HRDLK  N+L    +  +  KI DFG A
Sbjct: 110 YIMRKLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFA 156

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 49.7 bits (119), Expect = 2e-06
 Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 7/46 (15%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNP----KISDFGLA 537
           I  G+ YLH     +I H DLK  NI+L  +  P    K+ DFGLA
Sbjct: 124 ILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 50.1 bits (120), Expect = 2e-06
 Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 6/50 (12%)

Query: 491 NIIIGIARGLLYLHQDSRLRIIHRDLKTSNILL---DQEMNPKISDFGLA 537
            II  +  G+ Y+H+     I+HRDLK  NILL   +++ + KI DFGL+
Sbjct: 125 RIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLS 171

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 49.2 bits (118), Expect = 2e-06
 Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 6/45 (13%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILL---DQEMNPKISDFGLA 537
           I  G+ YLHQ     I+H DLK  NILL       + KI DFG++
Sbjct: 140 ILEGVYYLHQ---NNIVHLDLKPQNILLSSIYPLGDIKIVDFGMS 181

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score = 49.0 bits (117), Expect = 2e-06
 Identities = 33/172 (19%), Positives = 61/172 (35%), Gaps = 40/172 (23%)

Query: 412 KLGKGGFGPVYKAKFPGGQQI------AVKRLSSASGQGLEEFK-----------NEIET 454
            +G+GGFG +Y A     + +       VK   S +G    E K            +   
Sbjct: 42  PIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIR 101

Query: 455 SNSNATIG-ANVKAFVREMKTFSD----------PTLSALLHW-EMRFNI--IIGIARGL 500
           +     +G           K                L  +      RF+   ++ ++  +
Sbjct: 102 TRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRI 161

Query: 501 L----YLHQDSRLRIIHRDLKTSNILLDQEMNPKI--SDFGLALDMMDQKLH 546
           L    Y+H+      +H D+K SN+LL+ +   ++   D+GLA     + +H
Sbjct: 162 LDILEYIHEHE---YVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVH 210

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 49.3 bits (118), Expect = 2e-06
 Identities = 36/168 (21%), Positives = 63/168 (37%), Gaps = 50/168 (29%)

Query: 412 KLGKGGFGPVYKAK-FPGGQQIAVKRLSSASG---QGLEEFK-----NEIETSNSNATIG 462
           KLG G F  V+ AK       +A+K +           +E K     N+ + +  ++   
Sbjct: 26  KLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGA 85

Query: 463 ANVKAFVREMKTFS----------------DPTLSALLHWEMRFN-----------IIIG 495
            ++   ++ +  F+                   L AL+    ++            I   
Sbjct: 86  NHI---LKLLDHFNHKGPNGVHVVMVFEVLGENLLALIK---KYEHRGIPLIYVKQISKQ 139

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNP------KISDFGLA 537
           +  GL Y+H   R  IIH D+K  N+L++   +P      KI+D G A
Sbjct: 140 LLLGLDYMH--RRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA 185

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 48.5 bits (116), Expect = 3e-06
 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 6/50 (12%)

Query: 491 NIIIGIARGLLYLHQDSRLRIIHRDLKTSNILL---DQEMNPKISDFGLA 537
           + +  I   + YLH+     I+HRDLK  N+L      +   KI+DFGL+
Sbjct: 152 DAVKQILEAVAYLHE---NGIVHRDLKPENLLYATPAPDAPLKIADFGLS 198

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 48.2 bits (115), Expect = 6e-06
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 6/50 (12%)

Query: 491 NIIIGIARGLLYLHQDSRLRIIHRDLKTSNILL---DQEMNPKISDFGLA 537
            I+  I   + YLH    + I HRD+K  N+L          K++DFG A
Sbjct: 165 EIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFA 211

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 46.3 bits (110), Expect = 2e-05
 Identities = 31/176 (17%), Positives = 57/176 (32%), Gaps = 37/176 (21%)

Query: 412 KLGKGGFGPVYKAK-FPGGQQIA---VKRLSSASGQGLEEFK-----------NEIETSN 456
           K+G GGFG +Y A      ++ A   VK     +G    E K            +     
Sbjct: 44  KIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERK 103

Query: 457 SNATIG-ANVKAFVREMKTFSD----------PTLSALLHWEMRFNI--IIGIARGLL-- 501
               +G                            L  +      F    ++ +   +L  
Sbjct: 104 QLDYLGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNGTFKKSTVLQLGIRMLDV 163

Query: 502 --YLHQDSRLRIIHRDLKTSNILLDQEMNPKI--SDFGLALDMMDQKLHASSKPNE 553
             Y+H++     +H D+K +N+LL  +   ++  +D+GL+        H   + N 
Sbjct: 164 LEYIHENE---YVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENP 216

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352

 Score = 46.3 bits (110), Expect = 2e-05
 Identities = 27/181 (14%), Positives = 59/181 (32%), Gaps = 42/181 (23%)

Query: 411 NKLGKGGFGPVYKAK---------FPGGQQIAVKRLSSASGQGLEEFK-----------N 450
           +   +   G +Y+A           P  Q+ ++K L +  G+   E             N
Sbjct: 48  SFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLK-LDAKDGRLFNEQNFFQRAAKPLQVN 106

Query: 451 EIETSNSNATIG-ANVKAFVREMKTFS-------DPTLSALLHWEMR--FNI--IIGIAR 498
           + +   S   +       F      +          +L + L    +   +   ++ +A 
Sbjct: 107 KWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSLGRSLQSALDVSPKHVLSERSVLQVAC 166

Query: 499 GLL----YLHQDSRLRIIHRDLKTSNILLDQEMNPKI--SDFGLALDMMDQKLHASSKPN 552
            LL    +LH++     +H ++   NI +D E   ++  + +G A        H +    
Sbjct: 167 RLLDALEFLHENE---YVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEG 223

Query: 553 E 553
            
Sbjct: 224 S 224

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 45.0 bits (107), Expect = 4e-05
 Identities = 33/154 (21%), Positives = 61/154 (39%), Gaps = 22/154 (14%)

Query: 412 KLGKGGFGPVYKAK-FPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVKAFVR 470
           ++G+G FG +++       QQ+A+K     S       +       +  T   NV  F +
Sbjct: 17  RIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQ 76

Query: 471 EMK------TFSDPTLSALLHWEMR-FNI--IIGIARGLL----YLHQDSRLRIIHRDLK 517
           E            P+L  LL    R F++  +   A+ +L     +H+ S   +++RD+K
Sbjct: 77  EGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKS---LVYRDIK 133

Query: 518 TSNILLDQEMNPK-----ISDFGLALDMMDQKLH 546
             N L+ +  +       + DFG+     D    
Sbjct: 134 PDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTK 167

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 42.8 bits (101), Expect = 2e-04
 Identities = 15/145 (10%), Positives = 36/145 (24%), Gaps = 25/145 (17%)

Query: 412 KLGKGGFGPVYKAKFPG-GQQIAVKRL---SSASGQGLEEFKNEIETSNSNATIG----A 463
             G       ++A      +Q+A+  +          L+E  +        + I     A
Sbjct: 38  FHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRL---SRIDKPGVA 94

Query: 464 NVKAFVRE-------MKTFSDPTLSALLHWEMR----FNIIIGIARGLLYLHQDSRLRII 512
            V   V          +     +L  +             +  +A      H   R  + 
Sbjct: 95  RVLDVVHTRAGGLVVAEWIRGGSLQEVADTSPSPVGAIRAMQSLAAAADAAH---RAGVA 151

Query: 513 HRDLKTSNILLDQEMNPKISDFGLA 537
                 S + +  + +  ++     
Sbjct: 152 LSIDHPSRVRVSIDGDVVLAYPATM 176

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 42.8 bits (101), Expect = 3e-04
 Identities = 19/44 (43%), Positives = 22/44 (50%), Gaps = 3/44 (6%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNP--KISDFGLA 537
           +   LL+L     L IIH DLK  NILL        KI DFG +
Sbjct: 166 MCTALLFLA-TPELSIIHCDLKPENILLCNPKRSAIKIVDFGSS 208

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 42.4 bits (100), Expect = 3e-04
 Identities = 35/154 (22%), Positives = 58/154 (37%), Gaps = 22/154 (14%)

Query: 412 KLGKGGFGPVYKAK-FPGGQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVKAFVR 470
           K+G G FG +   K     + +A+K     S       +        +      V  F  
Sbjct: 16  KIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGP 75

Query: 471 EMK------TFSDPTLSALLHWEMR-FNI--IIGIARGLL----YLHQDSRLRIIHRDLK 517
             K          P+L  L     R F++  ++ IA  L+    Y+H  +   +I+RD+K
Sbjct: 76  CGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKN---LIYRDVK 132

Query: 518 TSNILLDQEMNPK-----ISDFGLALDMMDQKLH 546
             N L+ +  N       I DF LA + +D +  
Sbjct: 133 PENFLIGRPGNKTQQVIHIIDFALAKEYIDPETK 166

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 42.4 bits (100), Expect = 4e-04
 Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 5/44 (11%)

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNP--KISDFGLA 537
           I + L  LH   + RIIH DLK  NILL Q+     K+ DFG +
Sbjct: 209 ILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGSS 249

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	626
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.97
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.97
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.97
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.96
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.96
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.95
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.95
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.95
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.95
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.94
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.94
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.93
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.93
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.93
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.92
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.92
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.92
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.9
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.9
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.9
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.9
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.9
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.89
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.89
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.89
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.89
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.89
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.89
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.89
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.88
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.88
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.88
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.88
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.88
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.88
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.88
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.88
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.88
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.88
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.88
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.88
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.88
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.88
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.88
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.88
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.87
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.87
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.87
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.87
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.87
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.87
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.87
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.87
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.87
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.87
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.87
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.87
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.87
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.86
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.86
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.86
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.86
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.86
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.86
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.86
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.86
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.86
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.86
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.86
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.86
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.86
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.86
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.86
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.86
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.86
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.86
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.86
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.86
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.86
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.86
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.86
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.85
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.85
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.85
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.85
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.85
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.85
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.85
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.85
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.85
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.85
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.85
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.85
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.85
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.85
3niz_A	311	Rhodanese family protein; structural genomics, str	99.85
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.85
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.85
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.85
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.85
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.85
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.84
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.84
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.84
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.84
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.84
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.84
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.84
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.84
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.84
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.84
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.84
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.84
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.84
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.84
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.84
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.84
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.84
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.84
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.84
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.84
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.84
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.84
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.84
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.83
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.83
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.83
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.83
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.83
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.83
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.83
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.83
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.83
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.83
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.83
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.83
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.83
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.83
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.83
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.83
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.83
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.83
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.83
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.83
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.83
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.83
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.83
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.83
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.83
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.83
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.83
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.83
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.83
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.83
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.83
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.83
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.83
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.82
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.82
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.82
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.82
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.82
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.82
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.82
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.82
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.82
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.82
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.82
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.82
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.82
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.82
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.82
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.82
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.82
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.82
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.82
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.82
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.82
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.82
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.82
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.82
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.82
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.82
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.82
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.82
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.82
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.82
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.82
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.82
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.82
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.82
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.82
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.82
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.82
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.82
3uqc_A	286	Probable conserved transmembrane protein; structur	99.82
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.82
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.82
3bhy_A	283	Death-associated protein kinase 3; death associate	99.81
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.81
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.81
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.81
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.81
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.81
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.81
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.81
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.81
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.81
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.81
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.81
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.81
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.81
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.81
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.81
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.81
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.81
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.81
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.81
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.81
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.81
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.81
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.81
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.81
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.81
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.81
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.81
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.8
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.8
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.8
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.8
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.8
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.8
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.8
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.8
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.8
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.8
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.8
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.8
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.8
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.79
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.79
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.79
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.79
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.79
3m7h_A	276	Putidacin L1; monocot mannose-binding lectin, bact	99.78
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.78
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.78
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.78
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.75
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.73
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.73
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.73
1dlp_A	236	Lectin scafet precursor; two-domain lectin, beta p	99.66
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.58
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.58
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.58
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.53
1xd5_A	112	Gastrodianin-1, antifungal protein GAFP-1; monocot	98.72
1b2p_A	119	Protein (lectin); mannose-binding lectin, monocot,	98.64
3a0c_A	110	Mannose/sialic acid-binding lectin; beta-prism II,	98.64
2dpf_A	115	Curculin; sweet taste, taste modifying, plant prot	98.63
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	98.49
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	98.38
3mez_B	113	Mannose-specific lectin 3 chain 2; heterotetramer,	98.08
3r0e_A	109	Lectin; carbohydrate binding, carbohydrate, sugar	98.07
3r0e_B	110	Lectin; carbohydrate binding, carbohydrate, sugar	98.07
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	98.05
3mez_A	111	Mannose-specific lectin 3 chain 1; heterotetramer,	98.0
4h3o_A	105	Lectin; cadmium, plant protein; 2.17A {Allium sati	97.93
3dzw_A	109	Agglutinin; lectin, mannobiose, mannose-alpha1, 3-	97.91
1xd5_A	112	Gastrodianin-1, antifungal protein GAFP-1; monocot	97.61
2dpf_A	115	Curculin; sweet taste, taste modifying, plant prot	97.6
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	97.3
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.3
3mez_A	111	Mannose-specific lectin 3 chain 1; heterotetramer,	97.28
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	97.17
1b2p_A	119	Protein (lectin); mannose-binding lectin, monocot,	97.05
3a0c_A	110	Mannose/sialic acid-binding lectin; beta-prism II,	96.74
3dzw_A	109	Agglutinin; lectin, mannobiose, mannose-alpha1, 3-	96.67
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	96.61
3r0e_B	110	Lectin; carbohydrate binding, carbohydrate, sugar	96.61
3ats_A	357	Putative uncharacterized protein; hypothetical pro	96.57
3r0e_A	109	Lectin; carbohydrate binding, carbohydrate, sugar	96.55
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	96.49
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	96.33
1dlp_A	236	Lectin scafet precursor; two-domain lectin, beta p	96.06
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	95.68
3mez_B	113	Mannose-specific lectin 3 chain 2; heterotetramer,	95.66
4h3o_A	105	Lectin; cadmium, plant protein; 2.17A {Allium sati	95.62
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	94.92
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	93.64
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	92.35
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	91.08
2ll3_A	82	Micronemal protein 4; cell adhesion; NMR {Toxoplas	90.89
3m7h_A	276	Putidacin L1; monocot mannose-binding lectin, bact	90.27
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	90.18
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	87.8
2ks1_B	44	Epidermal growth factor receptor; ERBB1, ERBB2, tr	87.79
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	87.14
2l2t_A	44	Receptor tyrosine-protein kinase ERBB-4; transmemb	85.09
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	84.14
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	81.09

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.97  E-value=7.4e-32  Score=276.85  Aligned_cols=179  Identities=26%  Similarity=0.353  Sum_probs=142.8

Q ss_pred             cCccccccccccCeEEEEEEEcC------CCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH--HHHH
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP------GGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK--AFVR  470 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~------~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~  470 (626)
                      ++|.+.++||+|+||+||+|++.      +++.||||+++..+....++|.+|+++      +|++++++.+..  .++.
T Consensus        41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l  120 (329)
T 4aoj_A           41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM  120 (329)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence            46778899999999999999864      378899999987776777889999875      899999988765  4456


Q ss_pred             hhccccCCCccc---------------------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcE
Q 006915          471 EMKTFSDPTLSA---------------------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNP  529 (626)
Q Consensus       471 ~~~~~~~~~l~~---------------------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~  529 (626)
                      ++|++.+++|..                     .|+|.+++.|+.|||+||+|||+.+   ||||||||+||||++++.+
T Consensus       121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLKp~NILl~~~~~~  197 (329)
T 4aoj_A          121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVV  197 (329)
T ss_dssp             EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEE
T ss_pred             EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHhhEEECCCCcE
Confidence            778888777643                     3789999999999999999999987   9999999999999999999


Q ss_pred             EEEecCcchh---------------------------------------------ccc-ccc------------------
Q 006915          530 KISDFGLALD---------------------------------------------MMD-QKL------------------  545 (626)
Q Consensus       530 kl~DFGla~~---------------------------------------------~~~-~~~------------------  545 (626)
                      ||+|||+|+.                                             ++. .+.                  
T Consensus       198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~g~  277 (329)
T 4aoj_A          198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGR  277 (329)
T ss_dssp             EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHHHTC
T ss_pred             EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC
Confidence            9999999821                                             111 000                  


Q ss_pred             CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 006915          546 HASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEA  586 (626)
Q Consensus       546 ~~~~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~  586 (626)
                      ....+......+.+++..||+.||.+||||.+|+++|+.+.
T Consensus       278 ~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~  318 (329)
T 4aoj_A          278 ELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALA  318 (329)
T ss_dssp             CCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHH
T ss_pred             CCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHh
Confidence            01112223356788899999999999999999999998874

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.97  E-value=8.7e-32  Score=272.56  Aligned_cols=179  Identities=27%  Similarity=0.386  Sum_probs=143.2

Q ss_pred             cCccccccccccCeEEEEEEEcC------CCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH--HHHH
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP------GGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK--AFVR  470 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~------~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~  470 (626)
                      ++|.+.++||+|+||+||+|++.      +++.||||+++..+....++|.+|+++      +|++++++.+..  .++.
T Consensus        13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l   92 (299)
T 4asz_A           13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM   92 (299)
T ss_dssp             GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence            56888899999999999999863      377899999987766677889999775      899999988765  4556


Q ss_pred             hhccccCCCccc-------------------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEE
Q 006915          471 EMKTFSDPTLSA-------------------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKI  531 (626)
Q Consensus       471 ~~~~~~~~~l~~-------------------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl  531 (626)
                      ++|++.+++|..                   .|+|.+++.|+.|||+||+|||+++   ||||||||+||||++++.+||
T Consensus        93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDlKp~NILl~~~~~~Ki  169 (299)
T 4asz_A           93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVKI  169 (299)
T ss_dssp             EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEE
T ss_pred             EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCccCHhhEEECCCCcEEE
Confidence            778888877643                   4789999999999999999999987   999999999999999999999


Q ss_pred             EecCcchh---------------------------------------------ccc-ccc------------------CC
Q 006915          532 SDFGLALD---------------------------------------------MMD-QKL------------------HA  547 (626)
Q Consensus       532 ~DFGla~~---------------------------------------------~~~-~~~------------------~~  547 (626)
                      +|||+|+.                                             ++. .+.                  ..
T Consensus       170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~~~~~  249 (299)
T 4asz_A          170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVL  249 (299)
T ss_dssp             CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHHTCCC
T ss_pred             CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCC
Confidence            99999821                                             111 010                  01


Q ss_pred             CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 006915          548 SSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEA  586 (626)
Q Consensus       548 ~~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~  586 (626)
                      ..+......+.+++..||+.||.+||||.+++..|+.+.
T Consensus       250 ~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~  288 (299)
T 4asz_A          250 QRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLA  288 (299)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence            112233456788999999999999999999999998764

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.97  E-value=2.5e-31  Score=270.37  Aligned_cols=177  Identities=27%  Similarity=0.352  Sum_probs=138.0

Q ss_pred             CccccccccccCeEEEEEEEcC------CCcEEEEEEecCCC-cccHHHHHHHHHh------ccccceecchHH--HHHH
Q 006915          406 NFSEANKLGKGGFGPVYKAKFP------GGQQIAVKRLSSAS-GQGLEEFKNEIET------SNSNATIGANVK--AFVR  470 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~------~~~~vAvK~l~~~~-~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~  470 (626)
                      .+++.++||+|+||+||+|++.      +++.||||+++... ....++|.+|+.+      +|+++++|.+..  .++.
T Consensus        27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l  106 (308)
T 4gt4_A           27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM  106 (308)
T ss_dssp             GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred             HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence            4566789999999999999863      46789999997543 3456778888764      899999998764  3445


Q ss_pred             hhccccCCCccc----------------------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCc
Q 006915          471 EMKTFSDPTLSA----------------------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMN  528 (626)
Q Consensus       471 ~~~~~~~~~l~~----------------------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~  528 (626)
                      ++|++.+++|..                      .|+|.++++|+.|||+||+|||+.+   ||||||||+||||++++.
T Consensus       107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLK~~NILl~~~~~  183 (308)
T 4gt4_A          107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLN  183 (308)
T ss_dssp             EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGC
T ss_pred             EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCccccceEECCCCC
Confidence            677777766533                      4789999999999999999999998   999999999999999999


Q ss_pred             EEEEecCcchhc---------------------------------------------cc-cc------------------
Q 006915          529 PKISDFGLALDM---------------------------------------------MD-QK------------------  544 (626)
Q Consensus       529 ~kl~DFGla~~~---------------------------------------------~~-~~------------------  544 (626)
                      +||+|||+|+.+                                             +. ..                  
T Consensus       184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~~~  263 (308)
T 4gt4_A          184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNR  263 (308)
T ss_dssp             EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHTT
T ss_pred             EEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Confidence            999999998211                                             11 00                  


Q ss_pred             cCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 006915          545 LHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSE  585 (626)
Q Consensus       545 ~~~~~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~  585 (626)
                      .....+......+.+++..||+.||.+||||.+|++.|+..
T Consensus       264 ~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~  304 (308)
T 4gt4_A          264 QVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW  304 (308)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             CCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence            00112223345678899999999999999999999999865

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.96  E-value=2.3e-30  Score=262.30  Aligned_cols=181  Identities=28%  Similarity=0.409  Sum_probs=140.8

Q ss_pred             hcCccccccccccCeEEEEEEEcCCCcEEEEEEecCC--CcccHHHHHHHHHh------ccccceecchHH-HHHHhhcc
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSA--SGQGLEEFKNEIET------SNSNATIGANVK-AFVREMKT  474 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~--~~~~~~~~~~e~~~------~~~~~~~~~~~~-~~~~~~~~  474 (626)
                      .++|.+.++||+|+||+||+|++.+  .||||+++..  +....++|.+|+++      +|++++++++.. .++.++|+
T Consensus        35 ~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~iVmEy  112 (307)
T 3omv_A           35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQW  112 (307)
T ss_dssp             TTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEEC
T ss_pred             HHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEECCeEEEEEEc
Confidence            3567788999999999999999853  6999999743  33456778888774      889999887654 34467888


Q ss_pred             ccCCCccc-------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhc-------
Q 006915          475 FSDPTLSA-------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM-------  540 (626)
Q Consensus       475 ~~~~~l~~-------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~-------  540 (626)
                      +.+++|.+       .++|.+++.|+.|||.||+|||+++   ||||||||+||||++++.+||+|||+|+..       
T Consensus       113 ~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~---IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~  189 (307)
T 3omv_A          113 CEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQ  189 (307)
T ss_dssp             CSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCSSSEEEETTEEEEECCCSSCBC--------
T ss_pred             CCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCccCHHHEEECCCCcEEEeeccCceecccCCcce
Confidence            88887643       4789999999999999999999987   999999999999999999999999998110       


Q ss_pred             -----------cccc------------------------------cC-----------------------CCCChHHHHH
Q 006915          541 -----------MDQK------------------------------LH-----------------------ASSKPNEILK  556 (626)
Q Consensus       541 -----------~~~~------------------------------~~-----------------------~~~~~~~~~~  556 (626)
                                 +.|+                              .+                       ...+......
T Consensus       190 ~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  269 (307)
T 3omv_A          190 QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKA  269 (307)
T ss_dssp             ----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTSCHH
T ss_pred             eecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccccchHH
Confidence                       0000                              00                       0011122346


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHHhccccccC
Q 006915          557 CINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNL  589 (626)
Q Consensus       557 ~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~~~~  589 (626)
                      +.+++..||+.||.+||||.+|+.+|+.+...+
T Consensus       270 l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~l  302 (307)
T 3omv_A          270 MKRLVADCVKKVKEERPLFPQILSSIELLQHSL  302 (307)
T ss_dssp             HHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccC
Confidence            778889999999999999999999998764333

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.96  E-value=5e-30  Score=265.42  Aligned_cols=189  Identities=28%  Similarity=0.375  Sum_probs=145.6

Q ss_pred             cCHHHHHHhhcCccccccccccCeEEEEEEEcCC------CcEEEEEEecCCCc-ccHHHHHHHHHh-------ccccce
Q 006915          395 IDFESILAATDNFSEANKLGKGGFGPVYKAKFPG------GQQIAVKRLSSASG-QGLEEFKNEIET-------SNSNAT  460 (626)
Q Consensus       395 ~~~~~l~~~~~~f~~~~~lG~G~fG~Vy~~~~~~------~~~vAvK~l~~~~~-~~~~~~~~e~~~-------~~~~~~  460 (626)
                      ++..+++...++|++.+.||+|+||+||+|++..      ++.||||+++.... ...++|.+|+++       +|++++
T Consensus        54 ~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l  133 (353)
T 4ase_A           54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL  133 (353)
T ss_dssp             CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             CCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEE
Confidence            3445555667889999999999999999998632      46899999986433 345667778753       679999


Q ss_pred             ecchHH---HHHHhhccccCCCccc----------------------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecC
Q 006915          461 IGANVK---AFVREMKTFSDPTLSA----------------------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRD  515 (626)
Q Consensus       461 ~~~~~~---~~~~~~~~~~~~~l~~----------------------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrD  515 (626)
                      ++.+..   .++.++|++.+++|..                      .|++..++.|+.|||+||+|||+++   |||||
T Consensus       134 ~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~---iiHRD  210 (353)
T 4ase_A          134 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRD  210 (353)
T ss_dssp             EEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSC
T ss_pred             EEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC---eecCc
Confidence            987754   3456677777766543                      3678999999999999999999998   99999


Q ss_pred             CCCCCeEECCCCcEEEEecCcchh---------------------------------------------ccc-ccc----
Q 006915          516 LKTSNILLDQEMNPKISDFGLALD---------------------------------------------MMD-QKL----  545 (626)
Q Consensus       516 lkp~NILl~~~~~~kl~DFGla~~---------------------------------------------~~~-~~~----  545 (626)
                      |||+||||++++.+||+|||+|+.                                             ++. ...    
T Consensus       211 LK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~  290 (353)
T 4ase_A          211 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG  290 (353)
T ss_dssp             CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred             cCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCC
Confidence            999999999999999999999821                                             111 000    


Q ss_pred             ---------------CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 006915          546 ---------------HASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEA  586 (626)
Q Consensus       546 ---------------~~~~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~  586 (626)
                                     ....+......+.+++..||+.||.+||||.+++++|+.++
T Consensus       291 ~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~ll  346 (353)
T 4ase_A          291 VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL  346 (353)
T ss_dssp             CCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence                           01111223346788899999999999999999999998764

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.95  E-value=5.1e-29  Score=253.71  Aligned_cols=131  Identities=31%  Similarity=0.384  Sum_probs=105.4

Q ss_pred             cCccccccccccCeEEEEEEEcCCCcEEEEEEecCCCcccHHHHHHHHH------hccccceecchHH------HHHHhh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIE------TSNSNATIGANVK------AFVREM  472 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~e~~------~~~~~~~~~~~~~------~~~~~~  472 (626)
                      ++|.+.++||+|+||+||+|++ +|+.||||+++..... ...+..|+.      |+|++++++.+..      .++.++
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~   80 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS   80 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence            3577789999999999999998 5899999999753221 112233432      4888998887654      245678


Q ss_pred             ccccCCCcccC-----CCHHHHHHHHHHHHHHHHHHHhC-----CCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          473 KTFSDPTLSAL-----LHWEMRFNIIIGIARGLLYLHQD-----SRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       473 ~~~~~~~l~~~-----l~~~~~~~i~~~ia~gL~yLH~~-----~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      |++.+++|..+     ++|..+++|+.|+++||+|||++     ..++||||||||+||||+.++.+||+|||+|
T Consensus        81 Ey~~~gsL~~~l~~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla  155 (303)
T 3hmm_A           81 DYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA  155 (303)
T ss_dssp             ECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred             cCCCCCcHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCC
Confidence            88888887654     67999999999999999999987     2346999999999999999999999999997

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.95  E-value=5.6e-29  Score=254.53  Aligned_cols=191  Identities=20%  Similarity=0.219  Sum_probs=144.7

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCcc-cHHHHHHHHHhccccceecchHH--HHHHhhccccCCC
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQ-GLEEFKNEIETSNSNATIGANVK--AFVREMKTFSDPT  479 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~--~~~~~~~~~~~~~  479 (626)
                      .+.|.+.++||+|+||.||+|++. +|+.||||+++..... .+..+...+.|+|++++++....  .++.+||++.+++
T Consensus        57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~  136 (336)
T 4g3f_A           57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGS  136 (336)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCB
T ss_pred             hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHhHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCc
Confidence            356888899999999999999974 5999999999854322 12223344556899998876543  3456788888888


Q ss_pred             ccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCC-cEEEEecCcchhccc----------
Q 006915          480 LSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEM-NPKISDFGLALDMMD----------  542 (626)
Q Consensus       480 l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~-~~kl~DFGla~~~~~----------  542 (626)
                      |..      .|++.....|+.||+.||+|||+++   ||||||||+||||+.++ .+||+|||+|+.+..          
T Consensus       137 L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~~~  213 (336)
T 4g3f_A          137 LGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTG  213 (336)
T ss_dssp             HHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCCGGGEEECTTSCCEEECCCTTCEEC------------
T ss_pred             HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccceecC
Confidence            754      4788999999999999999999998   99999999999999988 599999999822110          


Q ss_pred             -----------cc---------------------------cC--------------------CCCChHHHHHHHHHHHHh
Q 006915          543 -----------QK---------------------------LH--------------------ASSKPNEILKCINVGLLC  564 (626)
Q Consensus       543 -----------~~---------------------------~~--------------------~~~~~~~~~~~~~~~~~C  564 (626)
                                 |+                           .+                    ...++.....+.+++..|
T Consensus       214 ~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~  293 (336)
T 4g3f_A          214 DYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEG  293 (336)
T ss_dssp             CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCGGGGSCTTSCHHHHHHHHHH
T ss_pred             CccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCCCchhcCccCCHHHHHHHHHH
Confidence                       00                           00                    001112234577888899


Q ss_pred             cccCCCCCCCHHHHHHHhccccccCCCCCCCce
Q 006915          565 VQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAF  597 (626)
Q Consensus       565 ~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~P~~  597 (626)
                      |+.||.+|||+.|+++.|...+.++...++|-.
T Consensus       294 L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~  326 (336)
T 4g3f_A          294 LRKEPVHRASAMELRRKVGKALQEVGGLKSPWK  326 (336)
T ss_dssp             TCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSS
T ss_pred             ccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCc
Confidence            999999999999999999888777776666643

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.95  E-value=1.8e-28  Score=252.03  Aligned_cols=130  Identities=24%  Similarity=0.384  Sum_probs=103.4

Q ss_pred             cCccccccccccCeEEEEEEEc-CCCcEEEEEEecCC--CcccHHHHHHHHHh------ccccceecchHH--HHHHhhc
Q 006915          405 DNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSA--SGQGLEEFKNEIET------SNSNATIGANVK--AFVREMK  473 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~--~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~  473 (626)
                      ++|++.++||+|+||+||+|+. .+|+.||||++...  .....+.|.+|+++      +|++++++....  .++.+||
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE  103 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD  103 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence            6899999999999999999987 46999999999753  23345677788764      888888775443  4456788


Q ss_pred             cccCCCcccC--------CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          474 TFSDPTLSAL--------LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       474 ~~~~~~l~~~--------l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++.+++|.++        +++.+...|+.||+.||+|||+++   ||||||||+||||+.++.+||+|||+|
T Consensus       104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla  172 (350)
T 4b9d_A          104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTVQLGDFGIA  172 (350)
T ss_dssp             CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---CEETTCCGGGEEECTTCCEEECSTTEE
T ss_pred             CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCCEEEcccccc
Confidence            8888887543        467888999999999999999998   999999999999999999999999999

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.95  E-value=2.3e-28  Score=250.69  Aligned_cols=130  Identities=26%  Similarity=0.370  Sum_probs=109.0

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCcccHHHHHHHHH------hccccceecchHH--HHHHhhccc
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQGLEEFKNEIE------TSNSNATIGANVK--AFVREMKTF  475 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~~~~  475 (626)
                      +.|++.++||+|+||+||+|+.. +|+.||||++........+.+.+|++      |+|++++++....  .++.+||++
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~  153 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  153 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence            56899999999999999999985 69999999997554444455666655      4888888875443  445677888


Q ss_pred             cCCCccc-----CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          476 SDPTLSA-----LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       476 ~~~~l~~-----~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      .++++..     .+++.+...|+.||+.||+|||+++   ||||||||+||||+.++.+||+|||+|
T Consensus       154 ~gg~L~~~l~~~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla  217 (346)
T 4fih_A          154 EGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFC  217 (346)
T ss_dssp             TTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTC
T ss_pred             CCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEECCCCCEEEecCcCc
Confidence            8777644     4788999999999999999999998   999999999999999999999999998

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.94  E-value=5.1e-28  Score=243.22  Aligned_cols=129  Identities=28%  Similarity=0.355  Sum_probs=105.9

Q ss_pred             cccccccccCeEEEEEEEcC-CCcEEEEEEecCC--CcccHHHHHHHHHh------ccccceecchHH------HHHHhh
Q 006915          408 SEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSA--SGQGLEEFKNEIET------SNSNATIGANVK------AFVREM  472 (626)
Q Consensus       408 ~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~--~~~~~~~~~~e~~~------~~~~~~~~~~~~------~~~~~~  472 (626)
                      +..++||+|+||.||+|++. ++..||||++...  .....+.|.+|+++      +|++++++....      .++.+|
T Consensus        29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm  108 (290)
T 3fpq_A           29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT  108 (290)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence            55678999999999999874 5899999999743  23345678888764      889998875432      245678


Q ss_pred             ccccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECC-CCcEEEEecCcc
Q 006915          473 KTFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQ-EMNPKISDFGLA  537 (626)
Q Consensus       473 ~~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~-~~~~kl~DFGla  537 (626)
                      |++.+++|..      .+++.....|+.||+.||+|||+++ ++||||||||+||||+. ++.+||+|||+|
T Consensus       109 Ey~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~NILl~~~~g~vKl~DFGla  179 (290)
T 3fpq_A          109 ELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLA  179 (290)
T ss_dssp             ECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGGEEESSTTSCEEECCTTGG
T ss_pred             eCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC-CCEEecccChhheeEECCCCCEEEEeCcCC
Confidence            8888888754      4678899999999999999999985 46999999999999984 799999999998

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.94  E-value=1.1e-27  Score=251.95  Aligned_cols=131  Identities=26%  Similarity=0.366  Sum_probs=110.5

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCcccHHHHHHHHH------hccccceecchHH--HHHHhhcc
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQGLEEFKNEIE------TSNSNATIGANVK--AFVREMKT  474 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~~~  474 (626)
                      .+.|++.++||+|+||.||+|+.. +|+.||||++........+.+.+|+.      |+|++++++....  .++.+||+
T Consensus       150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy  229 (423)
T 4fie_A          150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF  229 (423)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence            357999999999999999999984 59999999998655555556666665      4888888875443  45567888


Q ss_pred             ccCCCccc-----CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          475 FSDPTLSA-----LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       475 ~~~~~l~~-----~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +.+++|..     .+++.+...|+.||+.||+|||+++   ||||||||+||||+.++.+||+|||+|
T Consensus       230 ~~gG~L~~~i~~~~l~e~~~~~~~~qil~aL~ylH~~~---IiHRDiKp~NILl~~~g~vKl~DFGla  294 (423)
T 4fie_A          230 LEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFC  294 (423)
T ss_dssp             CTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSTTTEEECTTCCEEECCCTTC
T ss_pred             CCCCcHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEecCccc
Confidence            88877654     3778899999999999999999998   999999999999999999999999998

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.93  E-value=6.4e-27  Score=233.14  Aligned_cols=129  Identities=27%  Similarity=0.388  Sum_probs=100.0

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHHHHh------ccccceecchHH--HHHHhh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNEIET------SNSNATIGANVK--AFVREM  472 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~  472 (626)
                      ++|++.+.||+|+||+||+|+.. +++.||||++++..   ......+.+|+++      +|++++.+....  .++.+|
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm   92 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI   92 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence            68999999999999999999974 69999999997532   2345567777654      788887764332  333456


Q ss_pred             ccccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          473 KTFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       473 ~~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      |+. ++++.      ..+++.+...++.||+.||+|||+++   |+||||||+||||++++.+||+|||+|
T Consensus        93 Ey~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDiKP~NILl~~~~~vkl~DFGla  159 (275)
T 3hyh_A           93 EYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLS  159 (275)
T ss_dssp             ECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTCCEEECCSSCC
T ss_pred             eCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCChHHeEECCCCCEEEeecCCC
Confidence            654 44442      34788999999999999999999998   999999999999999999999999999

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.93  E-value=3.7e-27  Score=238.89  Aligned_cols=131  Identities=27%  Similarity=0.441  Sum_probs=103.5

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC-cccHHHHHHHHHh------ccccceecchHH----------
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS-GQGLEEFKNEIET------SNSNATIGANVK----------  466 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~e~~~------~~~~~~~~~~~~----------  466 (626)
                      ++|++.+.||+|+||+||+|+.. +++.||||+++... ....+.+.+|+++      +|++++++....          
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~   84 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS   84 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence            46889999999999999999874 68999999997543 3345677888764      788888765432          


Q ss_pred             ----HHHHhhccccCCCcccC---------CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEe
Q 006915          467 ----AFVREMKTFSDPTLSAL---------LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISD  533 (626)
Q Consensus       467 ----~~~~~~~~~~~~~l~~~---------l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~D  533 (626)
                          .++.+||++.++++..+         ..+...+.|+.||+.||+|||+++   ||||||||+||||+.++.+||+|
T Consensus        85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~---IiHRDlKp~NILl~~~~~vKl~D  161 (299)
T 4g31_A           85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGD  161 (299)
T ss_dssp             --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECC
T ss_pred             CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCc---CccccCcHHHeEECCCCcEEEcc
Confidence                12356777777776543         345667889999999999999998   99999999999999999999999


Q ss_pred             cCcch
Q 006915          534 FGLAL  538 (626)
Q Consensus       534 FGla~  538 (626)
                      ||+|+
T Consensus       162 FGla~  166 (299)
T 4g31_A          162 FGLVT  166 (299)
T ss_dssp             CCCC-
T ss_pred             Cccce
Confidence            99984

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.93  E-value=5.1e-27  Score=237.17  Aligned_cols=130  Identities=26%  Similarity=0.307  Sum_probs=108.5

Q ss_pred             cCccccccccccCeEEEEEEEc-CCCcEEEEEEecCC---CcccHHHHHHHHHh------ccccceecchHH--HHHHhh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSA---SGQGLEEFKNEIET------SNSNATIGANVK--AFVREM  472 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~---~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~  472 (626)
                      ++|++.+.||+|+||+||+|+. .+++.||||++.+.   .....+.+.+|+++      +|+++++.....  .++.+|
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm  111 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL  111 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            4699999999999999999987 46999999999743   23445677888764      777777764332  445667


Q ss_pred             ccccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          473 KTFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       473 ~~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      |+..+++|..      .+++.....++.||+.||+|||+++   ||||||||+||||+.++.+||+|||+|
T Consensus       112 Ey~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDlKPeNILl~~~g~vKl~DFGla  179 (311)
T 4aw0_A          112 SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTA  179 (311)
T ss_dssp             CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred             ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEEcCCCCEEEEEcCCc
Confidence            8888877754      4778888999999999999999998   999999999999999999999999998

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.92  E-value=2.3e-25  Score=229.16  Aligned_cols=190  Identities=37%  Similarity=0.623  Sum_probs=149.3

Q ss_pred             ccCHHHHHHhhcCccccccccccCeEEEEEEEcCCCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH-
Q 006915          394 FIDFESILAATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK-  466 (626)
Q Consensus       394 ~~~~~~l~~~~~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~-  466 (626)
                      .+.+.++..++++|...+.||+|+||.||+|++.+++.||||++........+.+.+|+..      +|++++++.+.. 
T Consensus        28 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  107 (321)
T 2qkw_B           28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDER  107 (321)
T ss_dssp             --CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCT
T ss_pred             eecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC
Confidence            3445566678899999999999999999999998899999999987666667788888775      667777665432 


Q ss_pred             -HHHHhhccccCCCccc----------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecC
Q 006915          467 -AFVREMKTFSDPTLSA----------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFG  535 (626)
Q Consensus       467 -~~~~~~~~~~~~~l~~----------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFG  535 (626)
                       .++.+++++.++++..          .+++..++.++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||
T Consensus       108 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg  184 (321)
T 2qkw_B          108 NEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFG  184 (321)
T ss_dssp             TCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCSTTEEECTTCCEEECCCT
T ss_pred             CeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCC---eecCCCCHHHEEECCCCCEEEeecc
Confidence             2334456655555543          3678999999999999999999998   9999999999999999999999999


Q ss_pred             cchh---------------------------------------------cc-----------------------------
Q 006915          536 LALD---------------------------------------------MM-----------------------------  541 (626)
Q Consensus       536 la~~---------------------------------------------~~-----------------------------  541 (626)
                      ++..                                             ++                             
T Consensus       185 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  264 (321)
T 2qkw_B          185 ISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ  264 (321)
T ss_dssp             TCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTC
T ss_pred             cccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhcccccc
Confidence            8711                                             00                             


Q ss_pred             -----ccccCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 006915          542 -----DQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEA  586 (626)
Q Consensus       542 -----~~~~~~~~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~  586 (626)
                           ++.............+.+++..||+.||.+||++.++++.|+...
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l  314 (321)
T 2qkw_B          265 LEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYAL  314 (321)
T ss_dssp             CCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence                 011112233556677889999999999999999999999998764

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.92  E-value=1.7e-25  Score=230.66  Aligned_cols=195  Identities=39%  Similarity=0.640  Sum_probs=150.0

Q ss_pred             CCCccCHHHHHHhhcCccccccccccCeEEEEEEEcCCCcEEEEEEecCCCc-ccHHHHHHHHHh------ccccceecc
Q 006915          391 DLPFIDFESILAATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASG-QGLEEFKNEIET------SNSNATIGA  463 (626)
Q Consensus       391 ~~~~~~~~~l~~~~~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~-~~~~~~~~e~~~------~~~~~~~~~  463 (626)
                      .+..|++.++....++|.+.+.||+|+||.||+|+..+++.||||++..... .....+.+|++.      +|++++++.
T Consensus        16 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~   95 (326)
T 3uim_A           16 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF   95 (326)
T ss_dssp             CCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEE
T ss_pred             ccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEE
Confidence            4567899999999999999999999999999999988899999999975432 223357777664      667776665


Q ss_pred             hHH--HHHHhhccccCCCcc----------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEE
Q 006915          464 NVK--AFVREMKTFSDPTLS----------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKI  531 (626)
Q Consensus       464 ~~~--~~~~~~~~~~~~~l~----------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl  531 (626)
                      +..  ..+.+++++.++++.          ..+++..+..++.|++.||.|||+...++|+||||||+|||++.++.+||
T Consensus        96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl  175 (326)
T 3uim_A           96 CMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVV  175 (326)
T ss_dssp             ECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEE
T ss_pred             EecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEe
Confidence            432  222345555554442          23789999999999999999999993333999999999999999999999


Q ss_pred             EecCcchhc--------------------------------------------c--------------------------
Q 006915          532 SDFGLALDM--------------------------------------------M--------------------------  541 (626)
Q Consensus       532 ~DFGla~~~--------------------------------------------~--------------------------  541 (626)
                      +|||++..+                                            +                          
T Consensus       176 ~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~  255 (326)
T 3uim_A          176 GDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL  255 (326)
T ss_dssp             CCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTT
T ss_pred             ccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHH
Confidence            999998100                                            0                          


Q ss_pred             ----------ccccCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 006915          542 ----------DQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSE  585 (626)
Q Consensus       542 ----------~~~~~~~~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~  585 (626)
                                +..............+.+++..|++.||.+|||+.+++++|+..
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~  309 (326)
T 3uim_A          256 LKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD  309 (326)
T ss_dssp             TSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred             hhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence                      01111223455667889999999999999999999999999875

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.92  E-value=2.2e-26  Score=232.54  Aligned_cols=130  Identities=30%  Similarity=0.276  Sum_probs=102.6

Q ss_pred             cCccccccccccCeEEEEEEEcC----CCcEEEEEEecCCC--cccHHHHHHHHH------hccccceecchHH--HHHH
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP----GGQQIAVKRLSSAS--GQGLEEFKNEIE------TSNSNATIGANVK--AFVR  470 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~----~~~~vAvK~l~~~~--~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~  470 (626)
                      ++|++.+.||+|+||+||+|+..    .++.||||++++..  ......+.+|++      |+|++++.+....  .++.
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i  103 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL  103 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence            46999999999999999999762    47899999997532  223345677765      4778887765432  4456


Q ss_pred             hhccccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          471 EMKTFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       471 ~~~~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +||++.+++|..      .+++.+...++.||+.||+|||+++   ||||||||+|||++.++.+||+|||+|
T Consensus       104 vmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla  173 (304)
T 3ubd_A          104 ILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLS  173 (304)
T ss_dssp             EECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTSCEEEESSEEE
T ss_pred             EEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHeEEcCCCCEEecccccc
Confidence            788888888754      4778889999999999999999998   999999999999999999999999998

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.90  E-value=1.3e-24  Score=228.65  Aligned_cols=129  Identities=30%  Similarity=0.451  Sum_probs=103.4

Q ss_pred             cCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCC--cccHHHHHHHHH------hccccceecchHH--------H
Q 006915          405 DNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSAS--GQGLEEFKNEIE------TSNSNATIGANVK--------A  467 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~--~~~~~~~~~e~~------~~~~~~~~~~~~~--------~  467 (626)
                      ++|++.+.||+|+||+||+|+. .+|+.||||+++...  ....+.+.+|++      |+|++++.+....        .
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~  133 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS  133 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred             CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence            5799999999999999999987 469999999997532  233455666765      4788888764321        2


Q ss_pred             HHHhhccccCCCc------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          468 FVREMKTFSDPTL------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       468 ~~~~~~~~~~~~l------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++.+|+++. +++      ...+++.....++.||+.||.|||+++   ||||||||+|||++.++.+||+|||+|
T Consensus       134 ~~ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~---iiHRDlKP~NIl~~~~~~~Ki~DFGla  205 (398)
T 4b99_A          134 VYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMA  205 (398)
T ss_dssp             EEEEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred             EEEEEeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCc---CcCCCcCccccccCCCCCEEEeeccee
Confidence            334566553 333      234788999999999999999999998   999999999999999999999999998

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.90  E-value=2.3e-23  Score=212.62  Aligned_cols=192  Identities=32%  Similarity=0.513  Sum_probs=145.7

Q ss_pred             CCCCccCHHHHHHhhcCcccc------ccccccCeEEEEEEEcCCCcEEEEEEecCCC----cccHHHHHHHHHh-----
Q 006915          390 IDLPFIDFESILAATDNFSEA------NKLGKGGFGPVYKAKFPGGQQIAVKRLSSAS----GQGLEEFKNEIET-----  454 (626)
Q Consensus       390 ~~~~~~~~~~l~~~~~~f~~~------~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~----~~~~~~~~~e~~~-----  454 (626)
                      .....|++.++..++++|...      +.||+|+||.||+|+. +++.||||++....    ....+.+.+|+..     
T Consensus        10 ~~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~   88 (307)
T 2nru_A           10 TRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ   88 (307)
T ss_dssp             -CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCC
T ss_pred             CCCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcC
Confidence            356789999999999999877      8899999999999998 57899999987432    2334566677654     


Q ss_pred             -ccccceecchHH--HHHHhhccccCCCcc---------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeE
Q 006915          455 -SNSNATIGANVK--AFVREMKTFSDPTLS---------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNIL  522 (626)
Q Consensus       455 -~~~~~~~~~~~~--~~~~~~~~~~~~~l~---------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIL  522 (626)
                       ++++++++....  .++..++++.++++.         ..+++..++.++.||+.||.|||+.+   |+||||||+|||
T Consensus        89 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nil  165 (307)
T 2nru_A           89 HENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH---HIHRDIKSANIL  165 (307)
T ss_dssp             CTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEE
T ss_pred             CCCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEE
Confidence             677777765432  222344555444432         24789999999999999999999998   999999999999


Q ss_pred             ECCCCcEEEEecCcchhcc--------------------------------------------cccc-------------
Q 006915          523 LDQEMNPKISDFGLALDMM--------------------------------------------DQKL-------------  545 (626)
Q Consensus       523 l~~~~~~kl~DFGla~~~~--------------------------------------------~~~~-------------  545 (626)
                      ++.++.+||+|||++....                                            ....             
T Consensus       166 i~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~  245 (307)
T 2nru_A          166 LDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLD  245 (307)
T ss_dssp             ECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTTEECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTH
T ss_pred             EcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcCCCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHH
Confidence            9999999999999872110                                            0000             


Q ss_pred             -------------------CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 006915          546 -------------------HASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSE  585 (626)
Q Consensus       546 -------------------~~~~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~  585 (626)
                                         ....+......+..++..||+.+|.+||++.++++.|+.+
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l  304 (307)
T 2nru_A          246 IKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM  304 (307)
T ss_dssp             HHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             HHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence                               0011233445678899999999999999999999999875

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.90  E-value=4.8e-24  Score=221.89  Aligned_cols=132  Identities=27%  Similarity=0.362  Sum_probs=103.7

Q ss_pred             HhhcCccccccccccCeEEEEEEEcC----CCcEEEEEEecCCCcccHHHHHHHHHh-------ccccceecchHH--HH
Q 006915          402 AATDNFSEANKLGKGGFGPVYKAKFP----GGQQIAVKRLSSASGQGLEEFKNEIET-------SNSNATIGANVK--AF  468 (626)
Q Consensus       402 ~~~~~f~~~~~lG~G~fG~Vy~~~~~----~~~~vAvK~l~~~~~~~~~~~~~e~~~-------~~~~~~~~~~~~--~~  468 (626)
                      ...+.|++.++||+|+||+||+|+.+    .++.||||++....  ...++.+|++.       +|++++......  .+
T Consensus        18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~   95 (361)
T 4f9c_A           18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHV   95 (361)
T ss_dssp             GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEE
T ss_pred             CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEE
Confidence            34678999999999999999999752    46789999987543  33455666543       566666543221  34


Q ss_pred             HHhhccccCCCccc---CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCC-CcEEEEecCcch
Q 006915          469 VREMKTFSDPTLSA---LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQE-MNPKISDFGLAL  538 (626)
Q Consensus       469 ~~~~~~~~~~~l~~---~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~-~~~kl~DFGla~  538 (626)
                      +.+|+++.++++.+   .+++.+...++.||+.||+|||+++   ||||||||+|||++.+ +.+||+|||+|+
T Consensus        96 ~lvmE~~~g~~L~~~~~~l~~~~~~~~~~qll~al~ylH~~g---IiHRDiKPeNiLl~~~~~~~kl~DFGla~  166 (361)
T 4f9c_A           96 VIAMPYLEHESFLDILNSLSFQEVREYMLNLFKALKRIHQFG---IVHRDVKPSNFLYNRRLKKYALVDFGLAQ  166 (361)
T ss_dssp             EEEEECCCCCCHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred             EEEEeCCCcccHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCcCCHHHeEEeCCCCeEEECcCCCCc
Confidence            45677777776544   4778899999999999999999998   9999999999999877 799999999983

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.90  E-value=2.2e-24  Score=220.70  Aligned_cols=189  Identities=25%  Similarity=0.396  Sum_probs=135.2

Q ss_pred             HhhcCccccccccccCeEEEEEEEcCCCcEEEEEEecCCC--cccHHHHHHHHHh------ccccceecchHH--HHHHh
Q 006915          402 AATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSAS--GQGLEEFKNEIET------SNSNATIGANVK--AFVRE  471 (626)
Q Consensus       402 ~~~~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~--~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~  471 (626)
                      ...++|++.+.||+|+||.||+|+. .++.||||++....  ....+++.+|++.      +|++.+++....  .+..+
T Consensus        34 i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv  112 (309)
T 3p86_A           34 IPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIV  112 (309)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEE
T ss_pred             CChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEE
Confidence            3456899999999999999999987 57899999997543  2334567777654      777777765433  23345


Q ss_pred             hccccCCCcccC---------CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhccc
Q 006915          472 MKTFSDPTLSAL---------LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD  542 (626)
Q Consensus       472 ~~~~~~~~l~~~---------l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~  542 (626)
                      ++++.++++..+         +++..++.++.||+.||+|||+.+ ++|+||||||+|||++.++.+||+|||++.....
T Consensus       113 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~  191 (309)
T 3p86_A          113 TEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN-PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAS  191 (309)
T ss_dssp             EECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSS-SCCCCTTCCGGGEEECTTCCEEECCCC-------
T ss_pred             EecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCC-CCEECCCCChhhEEEeCCCcEEECCCCCCccccc
Confidence            666666655332         778889999999999999999885 4599999999999999999999999998721100


Q ss_pred             c-------------------------------------------cc-------------------CCCCChHHHHHHHHH
Q 006915          543 Q-------------------------------------------KL-------------------HASSKPNEILKCINV  560 (626)
Q Consensus       543 ~-------------------------------------------~~-------------------~~~~~~~~~~~~~~~  560 (626)
                      .                                           ..                   ....+......+.++
T Consensus       192 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  271 (309)
T 3p86_A          192 TFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAI  271 (309)
T ss_dssp             ----------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHHHHHH
T ss_pred             cccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHH
Confidence            0                                           00                   001111122356778


Q ss_pred             HHHhcccCCCCCCCHHHHHHHhccccccCCCC
Q 006915          561 GLLCVQEDPNDRPTMSDVVIMLGSEAMNLATP  592 (626)
Q Consensus       561 ~~~C~~~~p~~RPs~~~vl~~L~~~~~~~~~~  592 (626)
                      +..||+.+|.+||++.++++.|+.......+|
T Consensus       272 i~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p~  303 (309)
T 3p86_A          272 IEGCWTNEPWKRPSFATIMDLLRPLIKSAVPP  303 (309)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHHHHHHHC-----
T ss_pred             HHHHccCChhhCcCHHHHHHHHHHHHHhCCCC
Confidence            88999999999999999999999886544433

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.90  E-value=3.9e-24  Score=217.14  Aligned_cols=131  Identities=32%  Similarity=0.478  Sum_probs=108.3

Q ss_pred             hcCccccccccccCeEEEEEEEc-----CCCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHHH----H
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKF-----PGGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVKA----F  468 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~-----~~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~~----~  468 (626)
                      .++|++.+.||+|+||.||+|++     .+++.||||++........+.+.+|++.      +|++++.+.+...    +
T Consensus         9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   88 (295)
T 3ugc_A            9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL   88 (295)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred             HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence            35788899999999999999984     3588999999987666666777777664      7778877765331    3


Q ss_pred             HHhhccccCCCccc-------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          469 VREMKTFSDPTLSA-------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       469 ~~~~~~~~~~~l~~-------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +.+++++.++++..       .+++..++.++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus        89 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~~  161 (295)
T 3ugc_A           89 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLT  161 (295)
T ss_dssp             EEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCSC
T ss_pred             EEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHhhEEEcCCCeEEEccCccc
Confidence            35567776766643       3788899999999999999999998   999999999999999999999999998

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.89  E-value=4.8e-24  Score=230.09  Aligned_cols=181  Identities=24%  Similarity=0.354  Sum_probs=140.3

Q ss_pred             HhhcCccccccccccCeEEEEEEEcCCCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH-HHHHhhcc
Q 006915          402 AATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK-AFVREMKT  474 (626)
Q Consensus       402 ~~~~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~-~~~~~~~~  474 (626)
                      ...++|.+.+.||+|+||.||+|++.++..||||+++... ...+.|.+|+..      +|++++.+.+.. .++.++++
T Consensus       185 i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~lv~e~  263 (454)
T 1qcf_A          185 IPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEF  263 (454)
T ss_dssp             CCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEECC
T ss_pred             echHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEeCCccEEEEee
Confidence            4457789999999999999999999888999999998643 456788888764      777777765432 23345666


Q ss_pred             ccCCCccc--------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhcc-----
Q 006915          475 FSDPTLSA--------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMM-----  541 (626)
Q Consensus       475 ~~~~~l~~--------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~-----  541 (626)
                      +.++++..        .+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++.+.     
T Consensus       264 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~  340 (454)
T 1qcf_A          264 MAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT  340 (454)
T ss_dssp             CTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHH
T ss_pred             cCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCcee
Confidence            66666543        3667888999999999999999998   9999999999999999999999999983211     


Q ss_pred             ---------------------------------------c-cccC------------------CCCChHHHHHHHHHHHH
Q 006915          542 ---------------------------------------D-QKLH------------------ASSKPNEILKCINVGLL  563 (626)
Q Consensus       542 ---------------------------------------~-~~~~------------------~~~~~~~~~~~~~~~~~  563 (626)
                                                             . ...+                  ...+......+.+++..
T Consensus       341 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~  420 (454)
T 1qcf_A          341 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMR  420 (454)
T ss_dssp             TTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCCCCTTSCHHHHHHHHH
T ss_pred             ccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHH
Confidence                                                   1 0000                  00111122457788899


Q ss_pred             hcccCCCCCCCHHHHHHHhcccc
Q 006915          564 CVQEDPNDRPTMSDVVIMLGSEA  586 (626)
Q Consensus       564 C~~~~p~~RPs~~~vl~~L~~~~  586 (626)
                      ||+.||.+||++.+++..|+...
T Consensus       421 cl~~dp~~RPt~~~i~~~L~~~~  443 (454)
T 1qcf_A          421 CWKNRPEERPTFEYIQSVLDDFY  443 (454)
T ss_dssp             HTCSSGGGSCCHHHHHHHHHTSS
T ss_pred             HccCChhHCcCHHHHHHHHHHHH
Confidence            99999999999999999998874

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.89  E-value=1e-23  Score=217.36  Aligned_cols=183  Identities=20%  Similarity=0.298  Sum_probs=138.1

Q ss_pred             hcCccccccccccCeEEEEEEEcC----CCcEEEEEEecCC-CcccHHHHHHHHHh------ccccceecchHH--HHHH
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP----GGQQIAVKRLSSA-SGQGLEEFKNEIET------SNSNATIGANVK--AFVR  470 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~----~~~~vAvK~l~~~-~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~  470 (626)
                      .++|.+.+.||+|+||.||+|++.    .+..||||.++.. .....+.|.+|+..      +|++++++.+..  .++.
T Consensus        48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  127 (325)
T 3kul_A           48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI  127 (325)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred             hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence            357888999999999999999884    3456999999854 33445677888764      677777765443  2334


Q ss_pred             hhccccCCCccc-------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhc---
Q 006915          471 EMKTFSDPTLSA-------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM---  540 (626)
Q Consensus       471 ~~~~~~~~~l~~-------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~---  540 (626)
                      +++++.++++..       .+++..++.++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++..+   
T Consensus       128 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~  204 (325)
T 3kul_A          128 VTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD  204 (325)
T ss_dssp             EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCSSCEECC--
T ss_pred             EeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEECCCCCEEECCCCcccccccC
Confidence            566666665532       4678999999999999999999998   999999999999999999999999998211   


Q ss_pred             -------------------------------------------cc-cccC------------------CCCChHHHHHHH
Q 006915          541 -------------------------------------------MD-QKLH------------------ASSKPNEILKCI  558 (626)
Q Consensus       541 -------------------------------------------~~-~~~~------------------~~~~~~~~~~~~  558 (626)
                                                                 +. ....                  ...+......+.
T Consensus       205 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  284 (325)
T 3kul_A          205 PDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPHALH  284 (325)
T ss_dssp             --CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHH
T ss_pred             ccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCCCCCCCCcCHHHH
Confidence                                                       11 0000                  001111234577


Q ss_pred             HHHHHhcccCCCCCCCHHHHHHHhccccccC
Q 006915          559 NVGLLCVQEDPNDRPTMSDVVIMLGSEAMNL  589 (626)
Q Consensus       559 ~~~~~C~~~~p~~RPs~~~vl~~L~~~~~~~  589 (626)
                      +++..||+.||.+||++.++++.|+.+....
T Consensus       285 ~li~~~l~~dp~~Rps~~eil~~L~~l~~~~  315 (325)
T 3kul_A          285 QLMLDCWHKDRAQRPRFSQIVSVLDALIRSP  315 (325)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHSC
T ss_pred             HHHHHHccCChhhCcCHHHHHHHHHHHHhCc
Confidence            8888999999999999999999999885443

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.89  E-value=9.2e-24  Score=221.64  Aligned_cols=180  Identities=27%  Similarity=0.349  Sum_probs=133.7

Q ss_pred             hcCccccccccccCeEEEEEEEcC--------CCcEEEEEEecCCC-cccHHHHHHHHH-------hccccceecchHH-
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP--------GGQQIAVKRLSSAS-GQGLEEFKNEIE-------TSNSNATIGANVK-  466 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~--------~~~~vAvK~l~~~~-~~~~~~~~~e~~-------~~~~~~~~~~~~~-  466 (626)
                      .++|.+.+.||+|+||.||+|+..        ++..||||+++... ....+.+.+|+.       ++|++++++.+.. 
T Consensus        80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~  159 (370)
T 2psq_A           80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  159 (370)
T ss_dssp             GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred             HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence            467899999999999999999752        35679999997543 234456667654       4777887765433 


Q ss_pred             -HHHHhhccccCCCcc----------------------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEE
Q 006915          467 -AFVREMKTFSDPTLS----------------------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILL  523 (626)
Q Consensus       467 -~~~~~~~~~~~~~l~----------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl  523 (626)
                       .++.+++++.++++.                      ..+++..++.++.||+.||+|||+.+   |+||||||+|||+
T Consensus       160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll  236 (370)
T 2psq_A          160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLV  236 (370)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEE
T ss_pred             CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchhhEEE
Confidence             233445555555442                      23678899999999999999999998   9999999999999


Q ss_pred             CCCCcEEEEecCcchhcc---------------------------------------------c-ccc------------
Q 006915          524 DQEMNPKISDFGLALDMM---------------------------------------------D-QKL------------  545 (626)
Q Consensus       524 ~~~~~~kl~DFGla~~~~---------------------------------------------~-~~~------------  545 (626)
                      +.++.+||+|||++..+.                                             . ...            
T Consensus       237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~  316 (370)
T 2psq_A          237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK  316 (370)
T ss_dssp             CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHH
T ss_pred             CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence            999999999999983111                                             0 000            


Q ss_pred             ------CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 006915          546 ------HASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEA  586 (626)
Q Consensus       546 ------~~~~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~  586 (626)
                            ....+......+..++..||+.+|.+||++.++++.|+.+.
T Consensus       317 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il  363 (370)
T 2psq_A          317 LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL  363 (370)
T ss_dssp             HHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence                  00011122235677888999999999999999999998864

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.89  E-value=5.9e-24  Score=217.49  Aligned_cols=132  Identities=30%  Similarity=0.455  Sum_probs=108.7

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH--HHHHhhcc
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK--AFVREMKT  474 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~  474 (626)
                      .++|.+.+.||+|+||.||+|+.. +++.||||++........+.|.+|++.      +|++++++.+..  .++.++++
T Consensus         9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   88 (310)
T 3s95_A            9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY   88 (310)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence            357888899999999999999984 589999999977666667788888765      677777665432  23345566


Q ss_pred             ccCCCcc-------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcch
Q 006915          475 FSDPTLS-------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLAL  538 (626)
Q Consensus       475 ~~~~~l~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~  538 (626)
                      +.++++.       ..+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||++.
T Consensus        89 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~  156 (310)
T 3s95_A           89 IKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLAR  156 (310)
T ss_dssp             CTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEECTTSCEEECCCTTCE
T ss_pred             cCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCcCeEEECCCCCEEEeecccce
Confidence            6666653       34788999999999999999999998   9999999999999999999999999983

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.89  E-value=2.9e-23  Score=213.54  Aligned_cols=142  Identities=28%  Similarity=0.345  Sum_probs=115.2

Q ss_pred             CccCHHHHHHhhcC----------ccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCcccHHHHHHHHHh------c
Q 006915          393 PFIDFESILAATDN----------FSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQGLEEFKNEIET------S  455 (626)
Q Consensus       393 ~~~~~~~l~~~~~~----------f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~e~~~------~  455 (626)
                      +.++++++..+++.          |...+.||+|+||.||+|+.. +|+.||||++........+.+.+|+..      +
T Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~  102 (321)
T 2c30_A           23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF  102 (321)
T ss_dssp             --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred             CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence            45788888888765          677789999999999999985 699999999987666667778888764      6


Q ss_pred             cccceecchHH--HHHHhhccccCCCccc-----CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCc
Q 006915          456 NSNATIGANVK--AFVREMKTFSDPTLSA-----LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMN  528 (626)
Q Consensus       456 ~~~~~~~~~~~--~~~~~~~~~~~~~l~~-----~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~  528 (626)
                      |++.+.+.+..  .++.+++++.++++..     .+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.
T Consensus       103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~  179 (321)
T 2c30_A          103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQG---VIHRDIKSDSILLTLDGR  179 (321)
T ss_dssp             TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCC
T ss_pred             CcceEEEEEEECCEEEEEEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCc
Confidence            67776654432  2334566666665543     4789999999999999999999998   999999999999999999


Q ss_pred             EEEEecCcc
Q 006915          529 PKISDFGLA  537 (626)
Q Consensus       529 ~kl~DFGla  537 (626)
                      +||+|||++
T Consensus       180 ~kl~Dfg~~  188 (321)
T 2c30_A          180 VKLSDFGFC  188 (321)
T ss_dssp             EEECCCTTC
T ss_pred             EEEeeeeee
Confidence            999999987

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.89  E-value=7.2e-24  Score=223.10  Aligned_cols=180  Identities=22%  Similarity=0.305  Sum_probs=136.2

Q ss_pred             hhcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCc-ccHHHHHHHHH------hccccceecchHH--HHHHhh
Q 006915          403 ATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASG-QGLEEFKNEIE------TSNSNATIGANVK--AFVREM  472 (626)
Q Consensus       403 ~~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~-~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~  472 (626)
                      ..++|.+.+.||+|+||.||+|++. +++.||||.++.... ....+|.+|++      ++|++++++.+..  .++.++
T Consensus       112 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  191 (377)
T 3cbl_A          112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVM  191 (377)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             chHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEE
Confidence            3467888999999999999999985 689999999975422 22334556655      4788888776543  334556


Q ss_pred             ccccCCCccc-------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhc-----
Q 006915          473 KTFSDPTLSA-------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM-----  540 (626)
Q Consensus       473 ~~~~~~~l~~-------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~-----  540 (626)
                      +++.++++..       .+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++..     
T Consensus       192 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~  268 (377)
T 3cbl_A          192 ELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVY  268 (377)
T ss_dssp             ECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEECTTSEE
T ss_pred             EcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cCCcccCHHHEEEcCCCcEEECcCCCceecCCCce
Confidence            6666666543       3778899999999999999999998   999999999999999999999999987211     


Q ss_pred             ----------------------------------------cc-ccc------------------CCCCChHHHHHHHHHH
Q 006915          541 ----------------------------------------MD-QKL------------------HASSKPNEILKCINVG  561 (626)
Q Consensus       541 ----------------------------------------~~-~~~------------------~~~~~~~~~~~~~~~~  561 (626)
                                                              +. ...                  ....+......+.+++
T Consensus       269 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  348 (377)
T 3cbl_A          269 AASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPELCPDAVFRLM  348 (377)
T ss_dssp             ECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHH
T ss_pred             eecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHH
Confidence                                                    10 000                  0001111234567888


Q ss_pred             HHhcccCCCCCCCHHHHHHHhccc
Q 006915          562 LLCVQEDPNDRPTMSDVVIMLGSE  585 (626)
Q Consensus       562 ~~C~~~~p~~RPs~~~vl~~L~~~  585 (626)
                      ..||+.||.+|||+.++++.|+.+
T Consensus       349 ~~cl~~dP~~Rps~~~i~~~L~~i  372 (377)
T 3cbl_A          349 EQCWAYEPGQRPSFSTIYQELQSI  372 (377)
T ss_dssp             HHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHcCCCchhCcCHHHHHHHHHHH
Confidence            899999999999999999999765

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.89  E-value=1.7e-23  Score=225.59  Aligned_cols=184  Identities=22%  Similarity=0.363  Sum_probs=140.0

Q ss_pred             hhcCccccccccccCeEEEEEEEcCCCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH-HHHHhhccc
Q 006915          403 ATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK-AFVREMKTF  475 (626)
Q Consensus       403 ~~~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~-~~~~~~~~~  475 (626)
                      ..++|.+.+.||+|+||.||+|++.++..||||+++... ...++|.+|+..      +|++++++.+.. .++.+++++
T Consensus       182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~iv~e~~  260 (452)
T 1fmk_A          182 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYM  260 (452)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECCC
T ss_pred             ChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcCCceEEEehhh
Confidence            456788899999999999999999888889999998643 345667777654      778888775543 233456666


Q ss_pred             cCCCccc--------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhc-------
Q 006915          476 SDPTLSA--------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM-------  540 (626)
Q Consensus       476 ~~~~l~~--------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~-------  540 (626)
                      .++++..        .+++..++.++.||+.||+|||+++   |+||||||+|||++.++.+||+|||+++.+       
T Consensus       261 ~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~  337 (452)
T 1fmk_A          261 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA  337 (452)
T ss_dssp             TTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCCTTC---------
T ss_pred             cCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEECCCCCEEECCCccceecCCCceec
Confidence            6666543        3678888999999999999999998   999999999999999999999999998221       


Q ss_pred             -------------------------------------cc-cccC------------------CCCChHHHHHHHHHHHHh
Q 006915          541 -------------------------------------MD-QKLH------------------ASSKPNEILKCINVGLLC  564 (626)
Q Consensus       541 -------------------------------------~~-~~~~------------------~~~~~~~~~~~~~~~~~C  564 (626)
                                                           +. ...+                  ...+......+.+++..|
T Consensus       338 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~c  417 (452)
T 1fmk_A          338 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQC  417 (452)
T ss_dssp             -----CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHH
T ss_pred             ccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHH
Confidence                                                 11 0000                  011112234577888999


Q ss_pred             cccCCCCCCCHHHHHHHhccccccCC
Q 006915          565 VQEDPNDRPTMSDVVIMLGSEAMNLA  590 (626)
Q Consensus       565 ~~~~p~~RPs~~~vl~~L~~~~~~~~  590 (626)
                      |+.+|.+||++.+++..|+.......
T Consensus       418 l~~dP~~Rpt~~~l~~~L~~~~~~~~  443 (452)
T 1fmk_A          418 WRKEPEERPTFEYLQAFLEDYFTSTE  443 (452)
T ss_dssp             TCSSGGGSCCHHHHHHHHHTTTSCSC
T ss_pred             ccCChhhCcCHHHHHHHHHHHhccCC
Confidence            99999999999999999988754433

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.88  E-value=2.7e-23  Score=211.31  Aligned_cols=131  Identities=25%  Similarity=0.409  Sum_probs=107.8

Q ss_pred             hcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCCcccHHHHHHHHH------hccccceecchHH--HHHHhhcc
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQGLEEFKNEIE------TSNSNATIGANVK--AFVREMKT  474 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~~~  474 (626)
                      .++|.+.+.||+|+||.||+|+. .+++.||||++........+.+.+|+.      ++|++++++....  .++.++++
T Consensus        19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   98 (297)
T 3fxz_A           19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   98 (297)
T ss_dssp             GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence            46799999999999999999987 568999999997655555566666665      4778887765432  33455677


Q ss_pred             ccCCCcccC-----CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          475 FSDPTLSAL-----LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       475 ~~~~~l~~~-----l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +.++++..+     +++..+..++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus        99 ~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~  163 (297)
T 3fxz_A           99 LAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFC  163 (297)
T ss_dssp             CTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTC
T ss_pred             CCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEECCCCCEEEeeCCCc
Confidence            767766543     778899999999999999999998   999999999999999999999999987

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.88  E-value=1.2e-23  Score=232.13  Aligned_cols=131  Identities=24%  Similarity=0.346  Sum_probs=107.3

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCcccHHHHHHHHH------hccccceecchHH--HHHHhhcc
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQGLEEFKNEIE------TSNSNATIGANVK--AFVREMKT  474 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~~~  474 (626)
                      .++|++.+.||+|+||.||+|+.. +|+.||||.+........+.+.+|+.      |+|++++.+....  .++..|++
T Consensus       156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~  235 (573)
T 3uto_A          156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF  235 (573)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence            368999999999999999999884 59999999998665555566777765      4777877764332  44466777


Q ss_pred             ccCCCccc-------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCC--CcEEEEecCcc
Q 006915          475 FSDPTLSA-------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQE--MNPKISDFGLA  537 (626)
Q Consensus       475 ~~~~~l~~-------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~--~~~kl~DFGla  537 (626)
                      +.+++|..       .|++.+...++.||+.||.|||+++   |+||||||+|||++.+  +.+||+|||+|
T Consensus       236 ~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~---iiHRDlKp~Nill~~~~~~~vKl~DFG~a  304 (573)
T 3uto_A          236 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLT  304 (573)
T ss_dssp             CCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCSSC
T ss_pred             cCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhccccCCCCCCEEEeeccce
Confidence            77777633       3668888999999999999999998   9999999999999854  88999999998

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.88  E-value=1.7e-23  Score=220.75  Aligned_cols=188  Identities=27%  Similarity=0.322  Sum_probs=136.6

Q ss_pred             hhcCccccccccccCeEEEEEEEcC--------CCcEEEEEEecCCC-cccHHHHHHHHH-------hccccceecchHH
Q 006915          403 ATDNFSEANKLGKGGFGPVYKAKFP--------GGQQIAVKRLSSAS-GQGLEEFKNEIE-------TSNSNATIGANVK  466 (626)
Q Consensus       403 ~~~~f~~~~~lG~G~fG~Vy~~~~~--------~~~~vAvK~l~~~~-~~~~~~~~~e~~-------~~~~~~~~~~~~~  466 (626)
                      ..++|.+.+.||+|+||.||+|+..        .+..||||+++... .....++.+|++       ++|++++++.+..
T Consensus        67 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~  146 (382)
T 3tt0_A           67 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ  146 (382)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             chhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence            3468899999999999999999852        24689999997543 233455666654       4778887765433


Q ss_pred             --HHHHhhccccCCCcc----------------------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeE
Q 006915          467 --AFVREMKTFSDPTLS----------------------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNIL  522 (626)
Q Consensus       467 --~~~~~~~~~~~~~l~----------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIL  522 (626)
                        .++.+++++.++++.                      ..+++..++.++.||+.||.|||+.+   |+||||||+|||
T Consensus       147 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIl  223 (382)
T 3tt0_A          147 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVL  223 (382)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEE
T ss_pred             CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCcceEE
Confidence              223344554444432                      34789999999999999999999998   999999999999


Q ss_pred             ECCCCcEEEEecCcchhccc----------------------------------------------cccC----------
Q 006915          523 LDQEMNPKISDFGLALDMMD----------------------------------------------QKLH----------  546 (626)
Q Consensus       523 l~~~~~~kl~DFGla~~~~~----------------------------------------------~~~~----------  546 (626)
                      ++.++.+||+|||++..+..                                              ....          
T Consensus       224 l~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~  303 (382)
T 3tt0_A          224 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF  303 (382)
T ss_dssp             ECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH
T ss_pred             EcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence            99999999999999832110                                              0000          


Q ss_pred             --------CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccccCCCCC
Q 006915          547 --------ASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPK  593 (626)
Q Consensus       547 --------~~~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~~~~~~~~  593 (626)
                              ...+......+.+++..||+.+|.+||++.++++.|+.+........
T Consensus       304 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~~  358 (382)
T 3tt0_A          304 KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQE  358 (382)
T ss_dssp             HHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCSCC
T ss_pred             HHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhcCC
Confidence                    00011112356778889999999999999999999999864444433

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.88  E-value=1.2e-23  Score=220.93  Aligned_cols=181  Identities=25%  Similarity=0.357  Sum_probs=132.9

Q ss_pred             hcCccccccccccCeEEEEEEEcC----CCcEEEEEEecCC-CcccHHHHHHHHHh------ccccceecchHH--HHHH
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP----GGQQIAVKRLSSA-SGQGLEEFKNEIET------SNSNATIGANVK--AFVR  470 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~----~~~~vAvK~l~~~-~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~  470 (626)
                      .++|.+.+.||+|+||.||+|++.    ++..||||.++.. .....++|.+|+..      +|++++.+.+..  .++.
T Consensus        44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l  123 (373)
T 2qol_A           44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI  123 (373)
T ss_dssp             GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred             HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence            357888999999999999999874    4678999999854 33445678888764      777777776543  2334


Q ss_pred             hhccccCCCccc-------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhcccc
Q 006915          471 EMKTFSDPTLSA-------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQ  543 (626)
Q Consensus       471 ~~~~~~~~~l~~-------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  543 (626)
                      +++++.++++..       .+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||++..+.+.
T Consensus       124 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~  200 (373)
T 2qol_A          124 VTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVLEDD  200 (373)
T ss_dssp             EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred             EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEEcCCCCEEECcCccccccccC
Confidence            566666666543       4778999999999999999999998   999999999999999999999999998321100


Q ss_pred             -----------------------------------------------ccC------------------CCCChHHHHHHH
Q 006915          544 -----------------------------------------------KLH------------------ASSKPNEILKCI  558 (626)
Q Consensus       544 -----------------------------------------------~~~------------------~~~~~~~~~~~~  558 (626)
                                                                     ...                  ...+......+.
T Consensus       201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~  280 (373)
T 2qol_A          201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALY  280 (373)
T ss_dssp             -------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTTEECCCCTTCBHHHH
T ss_pred             CccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCccccHHHH
Confidence                                                           000                  000111224577


Q ss_pred             HHHHHhcccCCCCCCCHHHHHHHhccccc
Q 006915          559 NVGLLCVQEDPNDRPTMSDVVIMLGSEAM  587 (626)
Q Consensus       559 ~~~~~C~~~~p~~RPs~~~vl~~L~~~~~  587 (626)
                      +++..||+.+|.+||++.++++.|+.+..
T Consensus       281 ~li~~cl~~dp~~RPs~~~i~~~L~~~~~  309 (373)
T 2qol_A          281 QLMLDCWQKDRNNRPKFEQIVSILDKLIR  309 (373)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHhCcChhhCcCHHHHHHHHHHHHh
Confidence            88889999999999999999999987643

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.88  E-value=2.1e-23  Score=215.09  Aligned_cols=130  Identities=29%  Similarity=0.431  Sum_probs=106.1

Q ss_pred             cCccccccccccCeEEEEEEEc-----CCCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH----HHH
Q 006915          405 DNFSEANKLGKGGFGPVYKAKF-----PGGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK----AFV  469 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~-----~~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~----~~~  469 (626)
                      ++|++.+.||+|+||.||+|++     .+++.||||++........+.+.+|++.      ++++.+.+....    .++
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~  102 (327)
T 3lxl_A           23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR  102 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred             hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence            5788899999999999999984     3588999999987666666678888765      667776654321    233


Q ss_pred             HhhccccCCCccc-------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          470 REMKTFSDPTLSA-------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       470 ~~~~~~~~~~l~~-------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      .+++++.++++..       .+++..++.++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus       103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~  174 (327)
T 3lxl_A          103 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLA  174 (327)
T ss_dssp             EEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCGGGC
T ss_pred             EEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChhhEEECCCCCEEEcccccc
Confidence            4566666666533       3788999999999999999999998   999999999999999999999999998

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.88  E-value=7.4e-23  Score=209.10  Aligned_cols=191  Identities=25%  Similarity=0.346  Sum_probs=141.1

Q ss_pred             cCccccccccccCeEEEEEEEcCCCcEEEEEEecCCCcccHHHHHHHHH------hccccceecchHHHHHHhhccccCC
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIE------TSNSNATIGANVKAFVREMKTFSDP  478 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~e~~------~~~~~~~~~~~~~~~~~~~~~~~~~  478 (626)
                      ++|++.+.||+|+||.||+|+.. ++.||||.+...  ...+.|.+|++      ++|++++++.+...++.+++++.++
T Consensus         8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~lv~e~~~~~   84 (307)
T 2eva_A            8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLNPVCLVMEYAEGG   84 (307)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTTTTEEEEECCTTC
T ss_pred             hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCcEEEEEcCCCC
Confidence            46888899999999999999984 788999999743  23455666654      4888888887766555667777666


Q ss_pred             Cccc---------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCc-EEEEecCcchhcc-------
Q 006915          479 TLSA---------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMN-PKISDFGLALDMM-------  541 (626)
Q Consensus       479 ~l~~---------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~-~kl~DFGla~~~~-------  541 (626)
                      ++..         .+.+..++.++.|+++||+|||+.+..+|+||||||+|||++.++. +||+|||++..+.       
T Consensus        85 ~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~~~~~  164 (307)
T 2eva_A           85 SLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK  164 (307)
T ss_dssp             BHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------------
T ss_pred             CHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccccccCC
Confidence            6533         3568888999999999999999943234999999999999998886 7999999972110       


Q ss_pred             ---------------------------------ccccCC--------------------CCChHHHHHHHHHHHHhcccC
Q 006915          542 ---------------------------------DQKLHA--------------------SSKPNEILKCINVGLLCVQED  568 (626)
Q Consensus       542 ---------------------------------~~~~~~--------------------~~~~~~~~~~~~~~~~C~~~~  568 (626)
                                                       ......                    .........+.+++..|++.|
T Consensus       165 gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d  244 (307)
T 2eva_A          165 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKD  244 (307)
T ss_dssp             CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCCCCBTTCCHHHHHHHHHHTCSS
T ss_pred             CCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCCCcccccCHHHHHHHHHHhcCC
Confidence                                             000000                    000111235677888999999


Q ss_pred             CCCCCCHHHHHHHhccccccCCCCCCCcee
Q 006915          569 PNDRPTMSDVVIMLGSEAMNLATPKRPAFV  598 (626)
Q Consensus       569 p~~RPs~~~vl~~L~~~~~~~~~~~~P~~~  598 (626)
                      |.+||++.++++.|+.+....+....|...
T Consensus       245 p~~Rps~~ell~~L~~~~~~~~~~~~~~~~  274 (307)
T 2eva_A          245 PSQRPSMEEIVKIMTHLMRYFPGADEPLQY  274 (307)
T ss_dssp             GGGSCCHHHHHHHHHHHGGGCCCTTSCCCC
T ss_pred             hhhCcCHHHHHHHHHHHHHhccCCCCcccc
Confidence            999999999999999987667666655543

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.88  E-value=1.4e-23  Score=216.50  Aligned_cols=179  Identities=26%  Similarity=0.399  Sum_probs=128.2

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCc----EEEEEEecCC-CcccHHHHHHHHHh------ccccceecchHH-HHHHh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQ----QIAVKRLSSA-SGQGLEEFKNEIET------SNSNATIGANVK-AFVRE  471 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~----~vAvK~l~~~-~~~~~~~~~~e~~~------~~~~~~~~~~~~-~~~~~  471 (626)
                      ++|++.+.||+|+||.||+|++. +++    .||+|.+... .....++|.+|+..      +|++++++.+.. .....
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~v   94 (327)
T 3poz_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLI   94 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSSEEEE
T ss_pred             HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEE
Confidence            46888999999999999999864 344    4688888643 33455677777654      778888775543 12233


Q ss_pred             hccccCCCcc-------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhc----
Q 006915          472 MKTFSDPTLS-------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM----  540 (626)
Q Consensus       472 ~~~~~~~~l~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~----  540 (626)
                      ++++..+++.       ..+++..++.++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++..+    
T Consensus        95 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~  171 (327)
T 3poz_A           95 TQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE  171 (327)
T ss_dssp             EECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTC
T ss_pred             EEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCChheEEECCCCCEEEccCcceeEccCCc
Confidence            4455555443       34788999999999999999999998   999999999999999999999999998211    


Q ss_pred             -----------------------------------------cc-cccC------------------CCCChHHHHHHHHH
Q 006915          541 -----------------------------------------MD-QKLH------------------ASSKPNEILKCINV  560 (626)
Q Consensus       541 -----------------------------------------~~-~~~~------------------~~~~~~~~~~~~~~  560 (626)
                                                               +. ....                  ...+......+..+
T Consensus       172 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  251 (327)
T 3poz_A          172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMI  251 (327)
T ss_dssp             C-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTBCHHHHHH
T ss_pred             ccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCCCCCCCccCCHHHHHH
Confidence                                                     11 0000                  01111223457788


Q ss_pred             HHHhcccCCCCCCCHHHHHHHhcccc
Q 006915          561 GLLCVQEDPNDRPTMSDVVIMLGSEA  586 (626)
Q Consensus       561 ~~~C~~~~p~~RPs~~~vl~~L~~~~  586 (626)
                      +..||+.+|.+||++.++++.|..+.
T Consensus       252 i~~~l~~~p~~Rps~~ell~~l~~~~  277 (327)
T 3poz_A          252 MVKCWMIDADSRPKFRELIIEFSKMA  277 (327)
T ss_dssp             HHHHTCSCGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHcCCChhhCCCHHHHHHHHHHHH
Confidence            88999999999999999999987764

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.88  E-value=9.1e-24  Score=220.67  Aligned_cols=189  Identities=27%  Similarity=0.358  Sum_probs=137.7

Q ss_pred             cCHHHHHHhhcCccccccccccCeEEEEEEEc------CCCcEEEEEEecCCC-cccHHHHHHHHH-------hccccce
Q 006915          395 IDFESILAATDNFSEANKLGKGGFGPVYKAKF------PGGQQIAVKRLSSAS-GQGLEEFKNEIE-------TSNSNAT  460 (626)
Q Consensus       395 ~~~~~l~~~~~~f~~~~~lG~G~fG~Vy~~~~------~~~~~vAvK~l~~~~-~~~~~~~~~e~~-------~~~~~~~  460 (626)
                      +...+.....++|.+.+.||+|+||.||+|++      .+++.||||+++... ....+.+.+|++       ++|++++
T Consensus        12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~   91 (359)
T 3vhe_A           12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL   91 (359)
T ss_dssp             CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence            34455556778999999999999999999973      346899999998643 233456777765       3788888


Q ss_pred             ecchHH---HHHHhhccccCCCc---------------------------------------------------------
Q 006915          461 IGANVK---AFVREMKTFSDPTL---------------------------------------------------------  480 (626)
Q Consensus       461 ~~~~~~---~~~~~~~~~~~~~l---------------------------------------------------------  480 (626)
                      ++.+..   .++.+++++.++++                                                         
T Consensus        92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (359)
T 3vhe_A           92 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK  171 (359)
T ss_dssp             EEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------
T ss_pred             eeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccc
Confidence            765433   12233344433322                                                         


Q ss_pred             ---------------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhc-----
Q 006915          481 ---------------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM-----  540 (626)
Q Consensus       481 ---------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~-----  540 (626)
                                     ...+++..++.++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++..+     
T Consensus       172 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~  248 (359)
T 3vhe_A          172 SLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD  248 (359)
T ss_dssp             ------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTT
T ss_pred             ccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCcEEEEeccceeeeccccc
Confidence                           112788899999999999999999998   999999999999999999999999998211     


Q ss_pred             ----------------------------------------cc-cccCC-------------------CCChHHHHHHHHH
Q 006915          541 ----------------------------------------MD-QKLHA-------------------SSKPNEILKCINV  560 (626)
Q Consensus       541 ----------------------------------------~~-~~~~~-------------------~~~~~~~~~~~~~  560 (626)
                                                              +. .....                   ..+......+.++
T Consensus       249 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  328 (359)
T 3vhe_A          249 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQT  328 (359)
T ss_dssp             CEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHH
T ss_pred             chhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCCCCCCCCHHHHHH
Confidence                                                    11 10000                   0011122357788


Q ss_pred             HHHhcccCCCCCCCHHHHHHHhcccc
Q 006915          561 GLLCVQEDPNDRPTMSDVVIMLGSEA  586 (626)
Q Consensus       561 ~~~C~~~~p~~RPs~~~vl~~L~~~~  586 (626)
                      +..|++.||.+||++.+++++|+.+.
T Consensus       329 i~~~l~~dP~~Rps~~ell~~L~~~~  354 (359)
T 3vhe_A          329 MLDCWHGEPSQRPTFSELVEHLGNLL  354 (359)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHccCChhhCCCHHHHHHHHHHHH
Confidence            88999999999999999999998764

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.88  E-value=3.6e-23  Score=227.63  Aligned_cols=182  Identities=23%  Similarity=0.370  Sum_probs=138.8

Q ss_pred             hhcCccccccccccCeEEEEEEEcCCCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH-HHHHhhccc
Q 006915          403 ATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK-AFVREMKTF  475 (626)
Q Consensus       403 ~~~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~-~~~~~~~~~  475 (626)
                      ..++|.+.+.||+|+||.||+|++.++..||||+++... ...++|.+|+++      +|++++++.+.. .++.+++++
T Consensus       265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~lv~e~~  343 (535)
T 2h8h_A          265 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYM  343 (535)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECCC
T ss_pred             chhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEeeccceEeeehh
Confidence            456788899999999999999999888889999998643 345667777654      778888765543 233455666


Q ss_pred             cCCCccc--------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhc-------
Q 006915          476 SDPTLSA--------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM-------  540 (626)
Q Consensus       476 ~~~~l~~--------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~-------  540 (626)
                      .++++..        .+++..++.|+.||+.||+|||+++   |+||||||+||||++++.+||+|||+++.+       
T Consensus       344 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~  420 (535)
T 2h8h_A          344 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA  420 (535)
T ss_dssp             TTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHT
T ss_pred             cCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEEcCCCcEEEcccccceecCCCceec
Confidence            6655533        3678889999999999999999998   999999999999999999999999998321       


Q ss_pred             -------------------------------------cc-cccC------------------CCCChHHHHHHHHHHHHh
Q 006915          541 -------------------------------------MD-QKLH------------------ASSKPNEILKCINVGLLC  564 (626)
Q Consensus       541 -------------------------------------~~-~~~~------------------~~~~~~~~~~~~~~~~~C  564 (626)
                                                           +. ....                  ...+......+.+++..|
T Consensus       421 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~c  500 (535)
T 2h8h_A          421 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQC  500 (535)
T ss_dssp             TCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHH
T ss_pred             ccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHH
Confidence                                                 11 0000                  001111224577888999


Q ss_pred             cccCCCCCCCHHHHHHHhcccccc
Q 006915          565 VQEDPNDRPTMSDVVIMLGSEAMN  588 (626)
Q Consensus       565 ~~~~p~~RPs~~~vl~~L~~~~~~  588 (626)
                      |+.||.+||++.+++..|+.....
T Consensus       501 l~~dP~~RPt~~~l~~~L~~~~~~  524 (535)
T 2h8h_A          501 WRKEPEERPTFEYLQAFLEDYFTS  524 (535)
T ss_dssp             TCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred             cCCChhHCcCHHHHHHHHHHHhhc
Confidence            999999999999999999887533

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.88  E-value=6.7e-23  Score=204.94  Aligned_cols=179  Identities=24%  Similarity=0.342  Sum_probs=135.5

Q ss_pred             hcCccccccccccCeEEEEEEEcCCCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH--HHHHhhccc
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK--AFVREMKTF  475 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~~  475 (626)
                      .++|++.+.||+|+||.||+|+..++..||||.++... ...+++.+|++.      ++++++.+.+..  .++.+++++
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   85 (268)
T 3sxs_A            7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI   85 (268)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred             hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence            46788999999999999999999888899999998543 234556666553      777777765433  223445666


Q ss_pred             cCCCccc-------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhc--------
Q 006915          476 SDPTLSA-------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM--------  540 (626)
Q Consensus       476 ~~~~l~~-------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~--------  540 (626)
                      .++++..       .+++..++.++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||++...        
T Consensus        86 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~  162 (268)
T 3sxs_A           86 SNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQ---FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSS  162 (268)
T ss_dssp             TTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEEC
T ss_pred             CCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCcceEEECCCCCEEEccCccceecchhhhhcc
Confidence            5555533       3788999999999999999999998   999999999999999999999999988211        


Q ss_pred             ------------------------------------cc-cccCC------------------CCChHHHHHHHHHHHHhc
Q 006915          541 ------------------------------------MD-QKLHA------------------SSKPNEILKCINVGLLCV  565 (626)
Q Consensus       541 ------------------------------------~~-~~~~~------------------~~~~~~~~~~~~~~~~C~  565 (626)
                                                          +. ...+.                  ..+......+.+++..|+
T Consensus       163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  242 (268)
T 3sxs_A          163 VGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASDTIYQIMYSCW  242 (268)
T ss_dssp             CSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHTT
T ss_pred             cCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCCCCCCCCcChHHHHHHHHHHc
Confidence                                                11 11000                  001111235678888999


Q ss_pred             ccCCCCCCCHHHHHHHhcccc
Q 006915          566 QEDPNDRPTMSDVVIMLGSEA  586 (626)
Q Consensus       566 ~~~p~~RPs~~~vl~~L~~~~  586 (626)
                      +.+|.+||++.++++.|+.+.
T Consensus       243 ~~~p~~Rps~~~ll~~L~~l~  263 (268)
T 3sxs_A          243 HELPEKRPTFQQLLSSIEPLR  263 (268)
T ss_dssp             CSSGGGSCCHHHHHHHHGGGC
T ss_pred             CCChhhCcCHHHHHHHHHHhh
Confidence            999999999999999998863

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.88  E-value=2.3e-23  Score=227.04  Aligned_cols=180  Identities=23%  Similarity=0.337  Sum_probs=138.8

Q ss_pred             hhcCccccccccccCeEEEEEEEcCC-CcEEEEEEecCCCcccHHHHHHHHH------hccccceecchHH--HHHHhhc
Q 006915          403 ATDNFSEANKLGKGGFGPVYKAKFPG-GQQIAVKRLSSASGQGLEEFKNEIE------TSNSNATIGANVK--AFVREMK  473 (626)
Q Consensus       403 ~~~~f~~~~~lG~G~fG~Vy~~~~~~-~~~vAvK~l~~~~~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~~  473 (626)
                      ..++|.+.+.||+|+||.||+|++.. +..||||.++... ...++|.+|+.      ++|++++++.+..  .++.+++
T Consensus       218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E  296 (495)
T 1opk_A          218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE  296 (495)
T ss_dssp             CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEE
Confidence            34568889999999999999999864 8899999998643 34567777765      4788888876543  3345566


Q ss_pred             cccCCCccc--------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhc-----
Q 006915          474 TFSDPTLSA--------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM-----  540 (626)
Q Consensus       474 ~~~~~~l~~--------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~-----  540 (626)
                      ++.++++..        .+++..++.++.||+.||+|||+++   |+||||||+|||++.++.+||+|||+++.+     
T Consensus       297 ~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~  373 (495)
T 1opk_A          297 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTY  373 (495)
T ss_dssp             CCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCEEECCTTCEECCTTCCE
T ss_pred             ccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChhhEEECCCCcEEEeecccceeccCCce
Confidence            666665532        3678899999999999999999998   999999999999999999999999998211     


Q ss_pred             ---------------------------------------cc-cc------------------cCCCCChHHHHHHHHHHH
Q 006915          541 ---------------------------------------MD-QK------------------LHASSKPNEILKCINVGL  562 (626)
Q Consensus       541 ---------------------------------------~~-~~------------------~~~~~~~~~~~~~~~~~~  562 (626)
                                                             +. ..                  .....+......+.+++.
T Consensus       374 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  453 (495)
T 1opk_A          374 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMR  453 (495)
T ss_dssp             ECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHH
T ss_pred             eecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHH
Confidence                                                   11 00                  000111122346778889


Q ss_pred             HhcccCCCCCCCHHHHHHHhcccc
Q 006915          563 LCVQEDPNDRPTMSDVVIMLGSEA  586 (626)
Q Consensus       563 ~C~~~~p~~RPs~~~vl~~L~~~~  586 (626)
                      .||+.||.+||++.++++.|+.+.
T Consensus       454 ~cl~~dP~~RPs~~el~~~L~~~~  477 (495)
T 1opk_A          454 ACWQWNPSDRPSFAEIHQAFETMF  477 (495)
T ss_dssp             HHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred             HHcCcChhHCcCHHHHHHHHHHHH
Confidence            999999999999999999998874

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.88  E-value=1.8e-23  Score=229.68  Aligned_cols=131  Identities=29%  Similarity=0.340  Sum_probs=104.8

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHH---H------HhccccceecchHH--HH
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNE---I------ETSNSNATIGANVK--AF  468 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e---~------~~~~~~~~~~~~~~--~~  468 (626)
                      .++|++.+.||+|+||+||+|+.. +|+.||||++.+..   ......+.+|   +      .|++++++......  .+
T Consensus       188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l  267 (689)
T 3v5w_A          188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL  267 (689)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred             hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence            467999999999999999999985 59999999997421   1222223333   2      23677777654332  44


Q ss_pred             HHhhccccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          469 VREMKTFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       469 ~~~~~~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +.+|+++.+++|..      .+++.....++.||+.||+|||+++   ||||||||+||||+.+|.+||+|||+|
T Consensus       268 ylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~g---IiHRDLKPeNILld~~G~vKL~DFGlA  339 (689)
T 3v5w_A          268 SFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA  339 (689)
T ss_dssp             EEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred             EEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHeEEeCCCCEEeccccee
Confidence            56788888888754      4778888999999999999999998   999999999999999999999999998

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.88  E-value=7.8e-24  Score=216.79  Aligned_cols=173  Identities=24%  Similarity=0.331  Sum_probs=125.0

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCc--ccHHHHHHHH-------HhccccceecchHH--HHHHhh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASG--QGLEEFKNEI-------ETSNSNATIGANVK--AFVREM  472 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~--~~~~~~~~e~-------~~~~~~~~~~~~~~--~~~~~~  472 (626)
                      ++|++.++||+|+||+||+|+.. +++.||||++.....  ....++..|+       .+++++++.+.+..  .++.++
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~  136 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT  136 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence            57999999999999999999985 699999999875322  2223333333       34777777765432  122333


Q ss_pred             ccccCCCc-------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhc-----
Q 006915          473 KTFSDPTL-------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM-----  540 (626)
Q Consensus       473 ~~~~~~~l-------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~-----  540 (626)
                      +++ ++++       ...+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||++...     
T Consensus       137 e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~  212 (311)
T 3p1a_A          137 ELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGA  212 (311)
T ss_dssp             ECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECGGGCEEECCCTTCEECC----
T ss_pred             ecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEccceeeeecccCCC
Confidence            433 3333       234889999999999999999999998   999999999999999999999999997211     


Q ss_pred             ----------cccccC--------------------------------------CCCCh----HHHHHHHHHHHHhcccC
Q 006915          541 ----------MDQKLH--------------------------------------ASSKP----NEILKCINVGLLCVQED  568 (626)
Q Consensus       541 ----------~~~~~~--------------------------------------~~~~~----~~~~~~~~~~~~C~~~~  568 (626)
                                ..++..                                      ...+.    .....+.+++..|++.|
T Consensus       213 ~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  292 (311)
T 3p1a_A          213 GEVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLPPEFTAGLSSELRSVLVMMLEPD  292 (311)
T ss_dssp             --CCCCCGGGCCGGGGGTCCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHHHHTTTCCCHHHHTTSCHHHHHHHHHHSCSS
T ss_pred             CcccCCCccccCHhHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHhccCCCcccccCCCHHHHHHHHHHcCCC
Confidence                      111100                                      00000    01245778888999999


Q ss_pred             CCCCCCHHHHHHH
Q 006915          569 PNDRPTMSDVVIM  581 (626)
Q Consensus       569 p~~RPs~~~vl~~  581 (626)
                      |.+||++.++++.
T Consensus       293 P~~Rpt~~ell~h  305 (311)
T 3p1a_A          293 PKLRATAEALLAL  305 (311)
T ss_dssp             TTTSCCHHHHHTS
T ss_pred             hhhCcCHHHHHhC
Confidence            9999999999864

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.88  E-value=4.3e-23  Score=222.30  Aligned_cols=178  Identities=22%  Similarity=0.359  Sum_probs=137.3

Q ss_pred             hhcCccccccccccCeEEEEEEEcCCCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH---HHHHhhc
Q 006915          403 ATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK---AFVREMK  473 (626)
Q Consensus       403 ~~~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~---~~~~~~~  473 (626)
                      ..++|.+.+.||+|+||.||+|++. ++.||||.++...  ..+.|.+|+..      +|++++++.+..   .++.+++
T Consensus       191 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e  267 (450)
T 1k9a_A          191 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE  267 (450)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEE
T ss_pred             ChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEE
Confidence            3467888999999999999999985 7899999998643  45667777654      788888876543   2345567


Q ss_pred             cccCCCccc--------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchh------
Q 006915          474 TFSDPTLSA--------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALD------  539 (626)
Q Consensus       474 ~~~~~~l~~--------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~------  539 (626)
                      ++.++++..        .+++..++.++.||+.||+|||+++   |+||||||+|||++.++.+||+|||+++.      
T Consensus       268 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~  344 (450)
T 1k9a_A          268 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD  344 (450)
T ss_dssp             CCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTSCEEECCCTTCEECC----
T ss_pred             ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEECCCCCEEEeeCCCccccccccc
Confidence            666666543        3678889999999999999999998   99999999999999999999999999821      


Q ss_pred             ----------------------------------ccc-ccc------------------CCCCChHHHHHHHHHHHHhcc
Q 006915          540 ----------------------------------MMD-QKL------------------HASSKPNEILKCINVGLLCVQ  566 (626)
Q Consensus       540 ----------------------------------~~~-~~~------------------~~~~~~~~~~~~~~~~~~C~~  566 (626)
                                                        ++. ...                  ....+......+.+++..||+
T Consensus       345 ~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~  424 (450)
T 1k9a_A          345 TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYDVMKNCWH  424 (450)
T ss_dssp             --CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTTCCCCCCTTCCHHHHHHHHHHTC
T ss_pred             CCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcC
Confidence                                              111 000                  001112223567788899999


Q ss_pred             cCCCCCCCHHHHHHHhcccc
Q 006915          567 EDPNDRPTMSDVVIMLGSEA  586 (626)
Q Consensus       567 ~~p~~RPs~~~vl~~L~~~~  586 (626)
                      .||.+||++.+++..|+.+.
T Consensus       425 ~dp~~Rpt~~~l~~~L~~i~  444 (450)
T 1k9a_A          425 LDAATRPTFLQLREQLEHIR  444 (450)
T ss_dssp             SSGGGSCCHHHHHHHHHHHH
T ss_pred             CChhHCcCHHHHHHHHHHHH
Confidence            99999999999999998753

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.88  E-value=3.1e-23  Score=213.41  Aligned_cols=187  Identities=26%  Similarity=0.433  Sum_probs=130.9

Q ss_pred             HHhhcCccccccccccCeEEEEEEEcCC-C---cEEEEEEecCC--CcccHHHHHHHHHh------ccccceecchHH--
Q 006915          401 LAATDNFSEANKLGKGGFGPVYKAKFPG-G---QQIAVKRLSSA--SGQGLEEFKNEIET------SNSNATIGANVK--  466 (626)
Q Consensus       401 ~~~~~~f~~~~~lG~G~fG~Vy~~~~~~-~---~~vAvK~l~~~--~~~~~~~~~~e~~~------~~~~~~~~~~~~--  466 (626)
                      ....++|.+.+.||+|+||.||+|+... +   ..||||.++..  .....+.+.+|++.      ++++++++....  
T Consensus        19 ~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   98 (323)
T 3qup_A           19 LIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSR   98 (323)
T ss_dssp             BCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-
T ss_pred             ccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccc
Confidence            3445789999999999999999998854 2   27999999754  33446677888764      667776664432  


Q ss_pred             HH------HHhhccccCCCccc------------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCc
Q 006915          467 AF------VREMKTFSDPTLSA------------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMN  528 (626)
Q Consensus       467 ~~------~~~~~~~~~~~l~~------------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~  528 (626)
                      ..      +..++++.++++..            .+++..++.++.||+.||.|||+.+   |+||||||+|||++.++.
T Consensus        99 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---ivH~Dikp~NIli~~~~~  175 (323)
T 3qup_A           99 AKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN---FIHRDLAARNCMLAEDMT  175 (323)
T ss_dssp             ------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSC
T ss_pred             cccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC---cccCCCCcceEEEcCCCC
Confidence            11      23455665655432            3778899999999999999999998   999999999999999999


Q ss_pred             EEEEecCcchhc---------------------------------------------cc-cccC----------------
Q 006915          529 PKISDFGLALDM---------------------------------------------MD-QKLH----------------  546 (626)
Q Consensus       529 ~kl~DFGla~~~---------------------------------------------~~-~~~~----------------  546 (626)
                      +||+|||++..+                                             +. ....                
T Consensus       176 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~  255 (323)
T 3qup_A          176 VCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGG  255 (323)
T ss_dssp             EEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTT
T ss_pred             EEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhcC
Confidence            999999998211                                             11 0000                


Q ss_pred             --CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccccCC
Q 006915          547 --ASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLA  590 (626)
Q Consensus       547 --~~~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~~~~~  590 (626)
                        ...+......+.+++..|++.||.+||++.++++.|+.++..+.
T Consensus       256 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~  301 (323)
T 3qup_A          256 NRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLS  301 (323)
T ss_dssp             CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC--
T ss_pred             CCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhh
Confidence              01111223467788889999999999999999999998865443

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.88  E-value=5e-23  Score=209.40  Aligned_cols=127  Identities=29%  Similarity=0.426  Sum_probs=100.5

Q ss_pred             hcCccccccccccCeEEEEEEEcCCCcEEEEEEecCCCcccHHHHHHH--------HHhccccceecchHH------HHH
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNE--------IETSNSNATIGANVK------AFV  469 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~e--------~~~~~~~~~~~~~~~------~~~  469 (626)
                      .++|++.+.||+|+||.||+|+. +++.||||++....   ...+..|        +.++|++++++.+..      .++
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~   82 (301)
T 3q4u_A            7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRD---EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW   82 (301)
T ss_dssp             GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred             cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEecccc---chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence            45789999999999999999998 68999999997532   2233333        345777777765332      133


Q ss_pred             HhhccccCCCccc-----CCCHHHHHHHHHHHHHHHHHHH--------hCCCCceEecCCCCCCeEECCCCcEEEEecCc
Q 006915          470 REMKTFSDPTLSA-----LLHWEMRFNIIIGIARGLLYLH--------QDSRLRIIHRDLKTSNILLDQEMNPKISDFGL  536 (626)
Q Consensus       470 ~~~~~~~~~~l~~-----~l~~~~~~~i~~~ia~gL~yLH--------~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl  536 (626)
                      .+++++.++++..     .+++..++.++.||+.||.|||        +.+   |+||||||+|||++.++.+||+|||+
T Consensus        83 lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nill~~~~~~kl~Dfg~  159 (301)
T 3q4u_A           83 LITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA---IAHRDLKSKNILVKKNGQCCIADLGL  159 (301)
T ss_dssp             EEECCCTTCBHHHHHTTCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE---EECSCCCGGGEEECTTSCEEECCCTT
T ss_pred             EehhhccCCCHHHHHhhcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC---eecCCCChHhEEEcCCCCEEEeeCCC
Confidence            4556666666544     3678999999999999999999        666   99999999999999999999999998


Q ss_pred             c
Q 006915          537 A  537 (626)
Q Consensus       537 a  537 (626)
                      +
T Consensus       160 a  160 (301)
T 3q4u_A          160 A  160 (301)
T ss_dssp             C
T ss_pred             e
Confidence            7

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.87  E-value=4.5e-23  Score=206.34  Aligned_cols=179  Identities=23%  Similarity=0.374  Sum_probs=134.7

Q ss_pred             hcCccccccccccCeEEEEEEEcCCCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH--HHHHhhccc
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK--AFVREMKTF  475 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~~  475 (626)
                      .++|++.+.||+|+||.||+|+..+++.||||++.... ...+++.+|++.      ++++++.+.+..  .++.+++++
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   87 (269)
T 4hcu_A            9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM   87 (269)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred             hhhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence            35788899999999999999999888999999998643 334567777654      677777665433  223445666


Q ss_pred             cCCCcc-------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhcc-------
Q 006915          476 SDPTLS-------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMM-------  541 (626)
Q Consensus       476 ~~~~l~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~-------  541 (626)
                      .++++.       ..+++..++.++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||++....       
T Consensus        88 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~  164 (269)
T 4hcu_A           88 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS  164 (269)
T ss_dssp             TTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHST
T ss_pred             CCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCC---eecCCcchheEEEcCCCCEEeccccccccccccccccc
Confidence            555443       23788999999999999999999998   9999999999999999999999999983111       


Q ss_pred             -------------------------------------c-cccC------------------CCCChHHHHHHHHHHHHhc
Q 006915          542 -------------------------------------D-QKLH------------------ASSKPNEILKCINVGLLCV  565 (626)
Q Consensus       542 -------------------------------------~-~~~~------------------~~~~~~~~~~~~~~~~~C~  565 (626)
                                                           . ....                  ...+......+.+++..|+
T Consensus       165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  244 (269)
T 4hcu_A          165 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCW  244 (269)
T ss_dssp             TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHHT
T ss_pred             cCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcCccCCCCCcCCHHHHHHHHHHc
Confidence                                                 0 0000                  0000111234667888999


Q ss_pred             ccCCCCCCCHHHHHHHhcccc
Q 006915          566 QEDPNDRPTMSDVVIMLGSEA  586 (626)
Q Consensus       566 ~~~p~~RPs~~~vl~~L~~~~  586 (626)
                      +.+|.+||++.++++.|..+.
T Consensus       245 ~~~p~~Rps~~~ll~~l~~l~  265 (269)
T 4hcu_A          245 RERPEDRPAFSRLLRQLAEIA  265 (269)
T ss_dssp             CSSGGGSCCHHHHHHHHHHHH
T ss_pred             cCCcccCcCHHHHHHHHHHHH
Confidence            999999999999999998763

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.87  E-value=8.2e-23  Score=205.99  Aligned_cols=180  Identities=21%  Similarity=0.307  Sum_probs=132.6

Q ss_pred             hhcCccccccccccCeEEEEEEEcCCCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH--HHHHhhcc
Q 006915          403 ATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK--AFVREMKT  474 (626)
Q Consensus       403 ~~~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~  474 (626)
                      ..++|++.+.||+|+||.||+|++.++..||||++.... ...+++.+|++.      ++++++.+.+..  .++.++++
T Consensus        22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  100 (283)
T 3gen_A           22 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEY  100 (283)
T ss_dssp             CGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECC
T ss_pred             CHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC-CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEec
Confidence            346788999999999999999999888899999998643 334567777654      667776664432  22344555


Q ss_pred             ccCCCcc-------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhc-------
Q 006915          475 FSDPTLS-------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM-------  540 (626)
Q Consensus       475 ~~~~~l~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~-------  540 (626)
                      +.++++.       ..+++..++.++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||++..+       
T Consensus       101 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~  177 (283)
T 3gen_A          101 MANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS  177 (283)
T ss_dssp             CTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHS
T ss_pred             cCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCccceEEEcCCCCEEEcccccccccccccccc
Confidence            5555442       34788999999999999999999998   999999999999999999999999998321       


Q ss_pred             -------------------------------------cc-cccC------------------CCCChHHHHHHHHHHHHh
Q 006915          541 -------------------------------------MD-QKLH------------------ASSKPNEILKCINVGLLC  564 (626)
Q Consensus       541 -------------------------------------~~-~~~~------------------~~~~~~~~~~~~~~~~~C  564 (626)
                                                           +. ....                  ...+......+.+++..|
T Consensus       178 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  257 (283)
T 3gen_A          178 SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSC  257 (283)
T ss_dssp             TTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHT
T ss_pred             ccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcccCCCCCCcCCHHHHHHHHHH
Confidence                                                 10 0000                  000111123567788899


Q ss_pred             cccCCCCCCCHHHHHHHhcccc
Q 006915          565 VQEDPNDRPTMSDVVIMLGSEA  586 (626)
Q Consensus       565 ~~~~p~~RPs~~~vl~~L~~~~  586 (626)
                      |+.+|.+||++.++++.|..+.
T Consensus       258 l~~~p~~Rps~~~ll~~L~~~~  279 (283)
T 3gen_A          258 WHEKADERPTFKILLSNILDVM  279 (283)
T ss_dssp             TCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ccCChhHCcCHHHHHHHHHHHh
Confidence            9999999999999999998764

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.87  E-value=8.4e-23  Score=205.48  Aligned_cols=183  Identities=24%  Similarity=0.368  Sum_probs=136.7

Q ss_pred             hcCccccccccccCeEEEEEEEcCCCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH-HHHHhhcccc
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK-AFVREMKTFS  476 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~-~~~~~~~~~~  476 (626)
                      .++|.+.+.||+|+||.||+|+..++..||||.+.... ...+.+.+|++.      ++++++.+.... .++..++++.
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~   90 (279)
T 1qpc_A           12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYME   90 (279)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEECCT
T ss_pred             HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcCCCcEEEEecCC
Confidence            46788999999999999999999888899999997543 345566666654      677777665432 2234455665


Q ss_pred             CCCccc--------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhc--------
Q 006915          477 DPTLSA--------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM--------  540 (626)
Q Consensus       477 ~~~l~~--------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~--------  540 (626)
                      ++++..        .+++..++.++.|++.||.|||+.+   |+||||||+|||+++++.+||+|||++..+        
T Consensus        91 ~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~  167 (279)
T 1qpc_A           91 NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAR  167 (279)
T ss_dssp             TCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECC
T ss_pred             CCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHhhEEEcCCCCEEECCCcccccccCcccccc
Confidence            666544        3678888999999999999999998   999999999999999999999999998211        


Q ss_pred             ------------------------------------cc-cccCC-C-----------------CChHHHHHHHHHHHHhc
Q 006915          541 ------------------------------------MD-QKLHA-S-----------------SKPNEILKCINVGLLCV  565 (626)
Q Consensus       541 ------------------------------------~~-~~~~~-~-----------------~~~~~~~~~~~~~~~C~  565 (626)
                                                          +. ..... .                 .+......+.+++..|+
T Consensus       168 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  247 (279)
T 1qpc_A          168 EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCW  247 (279)
T ss_dssp             TTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHT
T ss_pred             cCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcccCCCCcccccHHHHHHHHHHh
Confidence                                                11 01000 0                 00111235678888999


Q ss_pred             ccCCCCCCCHHHHHHHhccccccCC
Q 006915          566 QEDPNDRPTMSDVVIMLGSEAMNLA  590 (626)
Q Consensus       566 ~~~p~~RPs~~~vl~~L~~~~~~~~  590 (626)
                      +.+|.+||++.+++..|+.......
T Consensus       248 ~~~p~~Rps~~~l~~~l~~~~~~~~  272 (279)
T 1qpc_A          248 KERPEDRPTFDYLRSVLEDFFTATE  272 (279)
T ss_dssp             CSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred             ccChhhCCCHHHHHHHHHHHHHhcc
Confidence            9999999999999999988754433

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.87  E-value=1.3e-22  Score=204.98  Aligned_cols=180  Identities=27%  Similarity=0.451  Sum_probs=134.0

Q ss_pred             hcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCCccc-------HHHHHHHHHh------ccccceecchHHHHH
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQG-------LEEFKNEIET------SNSNATIGANVKAFV  469 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~~~-------~~~~~~e~~~------~~~~~~~~~~~~~~~  469 (626)
                      .++|.+.+.||+|+||.||+|+. .+++.||||++.......       .+.+.+|++.      +|++++++.......
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~   97 (287)
T 4f0f_A           18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR   97 (287)
T ss_dssp             STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTTE
T ss_pred             hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCCe
Confidence            46789999999999999999988 468999999987433221       1567777654      777777766544333


Q ss_pred             HhhccccCCCcc-------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCc-----EEEEecCcc
Q 006915          470 REMKTFSDPTLS-------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMN-----PKISDFGLA  537 (626)
Q Consensus       470 ~~~~~~~~~~l~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~-----~kl~DFGla  537 (626)
                      ..++++.++++.       ..+++..++.++.|++.||+|||+.+ ++|+||||||+|||++.++.     +||+|||++
T Consensus        98 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~  176 (287)
T 4f0f_A           98 MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS  176 (287)
T ss_dssp             EEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTC
T ss_pred             EEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCC-CCeecCCCCcceEEEeccCCCCceeEEeCCCCcc
Confidence            456666655552       24789999999999999999999885 45999999999999988776     999999988


Q ss_pred             hhc-------------ccccc--------------------------------------------------CCCCChHHH
Q 006915          538 LDM-------------MDQKL--------------------------------------------------HASSKPNEI  554 (626)
Q Consensus       538 ~~~-------------~~~~~--------------------------------------------------~~~~~~~~~  554 (626)
                      ...             ..++.                                                  ....+....
T Consensus       177 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (287)
T 4f0f_A          177 QQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCP  256 (287)
T ss_dssp             BCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCCCCCTTSC
T ss_pred             ccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCCCCCCcccC
Confidence            211             01110                                                  001111222


Q ss_pred             HHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 006915          555 LKCINVGLLCVQEDPNDRPTMSDVVIMLGS  584 (626)
Q Consensus       555 ~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~  584 (626)
                      ..+.+++..||+.||.+||++.++++.|+.
T Consensus       257 ~~l~~li~~~l~~dp~~Rps~~~ll~~L~~  286 (287)
T 4f0f_A          257 PRLRNVIELCWSGDPKKRPHFSYIVKELSE  286 (287)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred             HHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence            357788889999999999999999999865

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.87  E-value=7.1e-23  Score=210.74  Aligned_cols=129  Identities=31%  Similarity=0.451  Sum_probs=103.6

Q ss_pred             hcCccccccccccCeEEEEEEEcCCCcEEEEEEecCCCcccHHHHHHHHH------hccccceecchHH------HHHHh
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIE------TSNSNATIGANVK------AFVRE  471 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~e~~------~~~~~~~~~~~~~------~~~~~  471 (626)
                      .++|++.+.||+|+||.||+|++. ++.||||++.... .....+..|+.      ++|++++++.+..      .++.+
T Consensus        23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv  100 (322)
T 3soc_A           23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI  100 (322)
T ss_dssp             TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred             hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence            467899999999999999999885 7899999997543 22333444553      4777777765443      13455


Q ss_pred             hccccCCCccc-----CCCHHHHHHHHHHHHHHHHHHHhC----------CCCceEecCCCCCCeEECCCCcEEEEecCc
Q 006915          472 MKTFSDPTLSA-----LLHWEMRFNIIIGIARGLLYLHQD----------SRLRIIHRDLKTSNILLDQEMNPKISDFGL  536 (626)
Q Consensus       472 ~~~~~~~~l~~-----~l~~~~~~~i~~~ia~gL~yLH~~----------~~~~ivHrDlkp~NILl~~~~~~kl~DFGl  536 (626)
                      ++++.++++..     .+++..+..++.||+.||.|||+.          +   |+||||||+|||++.++.+||+|||+
T Consensus       101 ~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~---ivH~Dlkp~Nill~~~~~~kL~DFg~  177 (322)
T 3soc_A          101 TAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA---ISHRDIKSKNVLLKNNLTACIADFGL  177 (322)
T ss_dssp             EECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECE---EECSCCSGGGEEECTTCCEEECCCTT
T ss_pred             EecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCC---EEeCCCChHhEEECCCCeEEEccCCc
Confidence            67776767654     378999999999999999999988          6   99999999999999999999999999


Q ss_pred             c
Q 006915          537 A  537 (626)
Q Consensus       537 a  537 (626)
                      +
T Consensus       178 a  178 (322)
T 3soc_A          178 A  178 (322)
T ss_dssp             C
T ss_pred             c
Confidence            8

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.87  E-value=1.4e-22  Score=202.96  Aligned_cols=180  Identities=31%  Similarity=0.433  Sum_probs=129.3

Q ss_pred             hcCccccccccccCeEEEEEEEcCCCcEEEEEEecCCC----cccHHHHHHHHH------hccccceecchHH--HHHHh
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSAS----GQGLEEFKNEIE------TSNSNATIGANVK--AFVRE  471 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~----~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~  471 (626)
                      .++|++.+.||+|+||.||+|++. ++.||||.+....    ....+.+.+|++      +++++++.+.+..  .++.+
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   84 (271)
T 3dtc_A            6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV   84 (271)
T ss_dssp             TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred             hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence            357889999999999999999974 8899999987532    223455666655      3777777765443  23344


Q ss_pred             hccccCCCcc-----cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECC--------CCcEEEEecCcch
Q 006915          472 MKTFSDPTLS-----ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQ--------EMNPKISDFGLAL  538 (626)
Q Consensus       472 ~~~~~~~~l~-----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~--------~~~~kl~DFGla~  538 (626)
                      ++++.++++.     ..+++..+..++.|++.||.|||+.+..+|+||||||+|||++.        ++.+||+|||++.
T Consensus        85 ~e~~~~~~L~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~  164 (271)
T 3dtc_A           85 MEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR  164 (271)
T ss_dssp             EECCTTEEHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC--
T ss_pred             EEcCCCCCHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCccc
Confidence            5555555543     34788999999999999999999997667999999999999986        6789999999982


Q ss_pred             hcc-----------------------------------------ccc-------------------cCCCCChHHHHHHH
Q 006915          539 DMM-----------------------------------------DQK-------------------LHASSKPNEILKCI  558 (626)
Q Consensus       539 ~~~-----------------------------------------~~~-------------------~~~~~~~~~~~~~~  558 (626)
                      .+.                                         ...                   .....+......+.
T Consensus       165 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (271)
T 3dtc_A          165 EWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPFA  244 (271)
T ss_dssp             -----------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSCCCCCCCTTCCHHHH
T ss_pred             ccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCCCCCCCCcccCHHHH
Confidence            110                                         000                   00111112234577


Q ss_pred             HHHHHhcccCCCCCCCHHHHHHHhcc
Q 006915          559 NVGLLCVQEDPNDRPTMSDVVIMLGS  584 (626)
Q Consensus       559 ~~~~~C~~~~p~~RPs~~~vl~~L~~  584 (626)
                      +++..|++.+|.+||++.++++.|+.
T Consensus       245 ~li~~~l~~~p~~Rps~~e~l~~L~~  270 (271)
T 3dtc_A          245 KLMEDCWNPDPHSRPSFTNILDQLTT  270 (271)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred             HHHHHHhcCCcccCcCHHHHHHHHhc
Confidence            88889999999999999999999975

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.87  E-value=1.6e-22  Score=208.06  Aligned_cols=131  Identities=30%  Similarity=0.354  Sum_probs=101.8

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCc-ccHHHHHHHHH------hccccceecchHH--HHHHhhc
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASG-QGLEEFKNEIE------TSNSNATIGANVK--AFVREMK  473 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~-~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~~  473 (626)
                      .++|++.+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|+.      ++|++++++.+..  .++.+++
T Consensus         6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e   85 (323)
T 3tki_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   85 (323)
T ss_dssp             TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence            468999999999999999999875 689999999864322 22234455543      4778887765443  2234456


Q ss_pred             cccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          474 TFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       474 ~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++.++++..      .+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus        86 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~Dfg~a  152 (323)
T 3tki_A           86 YCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA  152 (323)
T ss_dssp             CCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred             cCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccchHHEEEeCCCCEEEEEeecc
Confidence            666555544      3678899999999999999999998   999999999999999999999999998

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.87  E-value=2.5e-23  Score=218.08  Aligned_cols=181  Identities=27%  Similarity=0.351  Sum_probs=131.8

Q ss_pred             hcCccccccccccCeEEEEEEEcC------CCcEEEEEEecCC-CcccHHHHHHHHH------hccccceecchHH--HH
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP------GGQQIAVKRLSSA-SGQGLEEFKNEIE------TSNSNATIGANVK--AF  468 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~------~~~~vAvK~l~~~-~~~~~~~~~~e~~------~~~~~~~~~~~~~--~~  468 (626)
                      .++|.+.+.||+|+||.||+|++.      +++.||||+++.. ......++.+|+.      ++|++++++.+..  .+
T Consensus        70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~  149 (367)
T 3l9p_A           70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR  149 (367)
T ss_dssp             GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence            357889999999999999999853      3678999999753 3334456666654      4778887775443  22


Q ss_pred             HHhhccccCCCcc-------------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCC---cEEEE
Q 006915          469 VREMKTFSDPTLS-------------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEM---NPKIS  532 (626)
Q Consensus       469 ~~~~~~~~~~~l~-------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~---~~kl~  532 (626)
                      +.+++++.++++.             ..+++..++.++.||+.||+|||+.+   |+||||||+|||++.++   .+||+
T Consensus       150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kL~  226 (367)
T 3l9p_A          150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIG  226 (367)
T ss_dssp             EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred             EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEEecCCCCceEEEC
Confidence            3345555444442             24778899999999999999999998   99999999999999554   59999


Q ss_pred             ecCcchhccc------------------cc----------------------------cC------------------CC
Q 006915          533 DFGLALDMMD------------------QK----------------------------LH------------------AS  548 (626)
Q Consensus       533 DFGla~~~~~------------------~~----------------------------~~------------------~~  548 (626)
                      |||+++.+..                  ++                            ..                  ..
T Consensus       227 DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~~~~~  306 (367)
T 3l9p_A          227 DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD  306 (367)
T ss_dssp             CCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCC
T ss_pred             CCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC
Confidence            9999832110                  00                            00                  00


Q ss_pred             CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccc
Q 006915          549 SKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAM  587 (626)
Q Consensus       549 ~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~~  587 (626)
                      .+......+.+++..||+.+|.+||++.++++.|+....
T Consensus       307 ~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~  345 (367)
T 3l9p_A          307 PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ  345 (367)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhh
Confidence            011122346778889999999999999999999987643

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.87  E-value=1.9e-22  Score=206.91  Aligned_cols=181  Identities=25%  Similarity=0.321  Sum_probs=135.3

Q ss_pred             hhcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH------HHH
Q 006915          403 ATDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK------AFV  469 (626)
Q Consensus       403 ~~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~------~~~  469 (626)
                      ..++|.+.+.||+|+||.||+++. .+++.||||++........+.+.+|++.      ++++++++.+..      .++
T Consensus        27 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~  106 (317)
T 2buj_A           27 DNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAW  106 (317)
T ss_dssp             TTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEE
T ss_pred             CCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeE
Confidence            356799999999999999999987 5689999999976555566677777664      677777665431      222


Q ss_pred             HhhccccCCCcc----------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchh
Q 006915          470 REMKTFSDPTLS----------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALD  539 (626)
Q Consensus       470 ~~~~~~~~~~l~----------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~  539 (626)
                      .+++++.++++.          ..+++..++.++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++..
T Consensus       107 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~dfg~~~~  183 (317)
T 2buj_A          107 LLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQ  183 (317)
T ss_dssp             EEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCSSCEE
T ss_pred             EEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCCEEEEecCcchh
Confidence            345555555542          34789999999999999999999998   99999999999999999999999997511


Q ss_pred             -------------------------ccccccCC-----------------------------------------------
Q 006915          540 -------------------------MMDQKLHA-----------------------------------------------  547 (626)
Q Consensus       540 -------------------------~~~~~~~~-----------------------------------------------  547 (626)
                                               +..++...                                               
T Consensus       184 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~  263 (317)
T 2buj_A          184 ACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQ  263 (317)
T ss_dssp             SCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHCC
T ss_pred             cccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhcc
Confidence                                     11111100                                               


Q ss_pred             ---CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 006915          548 ---SSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEA  586 (626)
Q Consensus       548 ---~~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~  586 (626)
                         .........+.+++..||+.||.+||++.++++.|+.+.
T Consensus       264 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~  305 (317)
T 2buj_A          264 LSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQ  305 (317)
T ss_dssp             --CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTC
T ss_pred             CCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcC
Confidence               000111235778888999999999999999999998763

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.87  E-value=8.5e-23  Score=209.74  Aligned_cols=180  Identities=24%  Similarity=0.338  Sum_probs=134.2

Q ss_pred             ccccccccccCeEEEEEEEcC-----CCcEEEEEEecCCC-cccHHHHHHHHHh------ccccceecchHH----HHHH
Q 006915          407 FSEANKLGKGGFGPVYKAKFP-----GGQQIAVKRLSSAS-GQGLEEFKNEIET------SNSNATIGANVK----AFVR  470 (626)
Q Consensus       407 f~~~~~lG~G~fG~Vy~~~~~-----~~~~vAvK~l~~~~-~~~~~~~~~e~~~------~~~~~~~~~~~~----~~~~  470 (626)
                      |++.+.||+|+||.||++.+.     +++.||||++.... ....+.+.+|++.      ++++.+.+....    .++.
T Consensus        33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l  112 (318)
T 3lxp_A           33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL  112 (318)
T ss_dssp             EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred             HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence            488899999999999998652     57899999998643 2334567777654      777777765432    2234


Q ss_pred             hhccccCCCcccC-----CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhcccc--
Q 006915          471 EMKTFSDPTLSAL-----LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQ--  543 (626)
Q Consensus       471 ~~~~~~~~~l~~~-----l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~--  543 (626)
                      +++++.++++..+     +++..++.++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++..+...  
T Consensus       113 v~e~~~~~~L~~~l~~~~~~~~~~~~i~~~l~~~l~~LH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~  189 (318)
T 3lxp_A          113 VMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE  189 (318)
T ss_dssp             EECCCTTCBHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEECCTTCS
T ss_pred             EEecccCCcHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEEcCCCCEEECCcccccccccccc
Confidence            5666666665443     678999999999999999999998   999999999999999999999999998221110  


Q ss_pred             -----------------c------------------------------------------------------------cC
Q 006915          544 -----------------K------------------------------------------------------------LH  546 (626)
Q Consensus       544 -----------------~------------------------------------------------------------~~  546 (626)
                                       +                                                            ..
T Consensus       190 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (318)
T 3lxp_A          190 YYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGER  269 (318)
T ss_dssp             EEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCC
T ss_pred             ccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccC
Confidence                             0                                                            00


Q ss_pred             CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccccC
Q 006915          547 ASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNL  589 (626)
Q Consensus       547 ~~~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~~~~  589 (626)
                      ...+......+.+++..||+.||.+||++.++++.|+.+....
T Consensus       270 ~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~  312 (318)
T 3lxp_A          270 LPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKY  312 (318)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             CCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhh
Confidence            0011112235778888999999999999999999998875433

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.87  E-value=1.4e-22  Score=205.94  Aligned_cols=131  Identities=25%  Similarity=0.350  Sum_probs=101.1

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCc--------------------------ccHHHHHHHHHh--
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASG--------------------------QGLEEFKNEIET--  454 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~--------------------------~~~~~~~~e~~~--  454 (626)
                      .++|.+.+.||+|+||.||+|+.. +++.||||++.....                          ...+.+.+|++.  
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   91 (298)
T 2zv2_A           12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK   91 (298)
T ss_dssp             ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred             ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence            467999999999999999999874 589999999975321                          112456666654  


Q ss_pred             ----ccccceecchHH----HHHHhhccccCCCccc-----CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCe
Q 006915          455 ----SNSNATIGANVK----AFVREMKTFSDPTLSA-----LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNI  521 (626)
Q Consensus       455 ----~~~~~~~~~~~~----~~~~~~~~~~~~~l~~-----~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NI  521 (626)
                          +|++++.+....    .++.+++++.++++..     .+++..+..++.||+.||+|||+.+   |+||||||+||
T Consensus        92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Ni  168 (298)
T 2zv2_A           92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQK---IIHRDIKPSNL  168 (298)
T ss_dssp             TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGE
T ss_pred             hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHE
Confidence                777777765432    2344566666655544     3678999999999999999999998   99999999999


Q ss_pred             EECCCCcEEEEecCcc
Q 006915          522 LLDQEMNPKISDFGLA  537 (626)
Q Consensus       522 Ll~~~~~~kl~DFGla  537 (626)
                      |++.++.+||+|||++
T Consensus       169 l~~~~~~~kl~Dfg~~  184 (298)
T 2zv2_A          169 LVGEDGHIKIADFGVS  184 (298)
T ss_dssp             EECTTSCEEECCCTTC
T ss_pred             EECCCCCEEEecCCCc
Confidence            9999999999999998

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.87  E-value=1.4e-22  Score=206.17  Aligned_cols=130  Identities=29%  Similarity=0.497  Sum_probs=102.1

Q ss_pred             cCccccccccccCeEEEEEEEc-----CCCcEEEEEEecCC-CcccHHHHHHHHHh------ccccceecchHHH----H
Q 006915          405 DNFSEANKLGKGGFGPVYKAKF-----PGGQQIAVKRLSSA-SGQGLEEFKNEIET------SNSNATIGANVKA----F  468 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~-----~~~~~vAvK~l~~~-~~~~~~~~~~e~~~------~~~~~~~~~~~~~----~  468 (626)
                      +.|++.+.||+|+||.||+|++     .+++.||||++... .....+.+.+|++.      ++++++.+.....    +
T Consensus        21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~  100 (302)
T 4e5w_A           21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI  100 (302)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred             hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence            4588889999999999999983     35889999999843 33445667777654      6777776654321    2


Q ss_pred             HHhhccccCCCccc-------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          469 VREMKTFSDPTLSA-------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       469 ~~~~~~~~~~~l~~-------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +.+++++.++++..       .+++..++.++.|++.||+|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus       101 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~  173 (302)
T 4e5w_A          101 KLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLT  173 (302)
T ss_dssp             EEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTC
T ss_pred             EEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCC---cccCCCchheEEEcCCCCEEECccccc
Confidence            34566666666543       3678899999999999999999998   999999999999999999999999998

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.87  E-value=8.5e-23  Score=211.85  Aligned_cols=185  Identities=25%  Similarity=0.377  Sum_probs=136.2

Q ss_pred             HHHhhcCccccccccccCeEEEEEEEcC------CCcEEEEEEecCCC-cccHHHHHHHHHh------ccccceecchHH
Q 006915          400 ILAATDNFSEANKLGKGGFGPVYKAKFP------GGQQIAVKRLSSAS-GQGLEEFKNEIET------SNSNATIGANVK  466 (626)
Q Consensus       400 l~~~~~~f~~~~~lG~G~fG~Vy~~~~~------~~~~vAvK~l~~~~-~~~~~~~~~e~~~------~~~~~~~~~~~~  466 (626)
                      +....++|.+.+.||+|+||.||+|+..      +++.||||.++... ....+.|.+|+..      +|++++++.+..
T Consensus        42 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~  121 (343)
T 1luf_A           42 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV  121 (343)
T ss_dssp             TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred             eEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc
Confidence            3445678999999999999999999874      34789999998543 2335567777664      677777765432


Q ss_pred             --HHHHhhccccCCCcc------------------------------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEec
Q 006915          467 --AFVREMKTFSDPTLS------------------------------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHR  514 (626)
Q Consensus       467 --~~~~~~~~~~~~~l~------------------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHr  514 (626)
                        .++.+++++.++++.                              ..+++..++.++.||+.||.|||+.+   |+||
T Consensus       122 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~---ivH~  198 (343)
T 1luf_A          122 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---FVHR  198 (343)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCS
T ss_pred             CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecC
Confidence              222334444443332                              45788899999999999999999998   9999


Q ss_pred             CCCCCCeEECCCCcEEEEecCcchhc---------------------------------------------cc-cccCC-
Q 006915          515 DLKTSNILLDQEMNPKISDFGLALDM---------------------------------------------MD-QKLHA-  547 (626)
Q Consensus       515 Dlkp~NILl~~~~~~kl~DFGla~~~---------------------------------------------~~-~~~~~-  547 (626)
                      ||||+|||++.++.+||+|||++..+                                             +. ..... 
T Consensus       199 Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~  278 (343)
T 1luf_A          199 DLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYY  278 (343)
T ss_dssp             CCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTT
T ss_pred             CCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCC
Confidence            99999999999999999999987221                                             11 00000 


Q ss_pred             -----------------CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccc
Q 006915          548 -----------------SSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAM  587 (626)
Q Consensus       548 -----------------~~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~~  587 (626)
                                       ..+......+.+++..||+.+|.+||++.++++.|+.+..
T Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~  335 (343)
T 1luf_A          279 GMAHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCE  335 (343)
T ss_dssp             TSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             CCChHHHHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHh
Confidence                             0111122357788889999999999999999999988753

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.86  E-value=6.1e-23  Score=207.55  Aligned_cols=180  Identities=19%  Similarity=0.297  Sum_probs=135.2

Q ss_pred             hcCccccccccccCeEEEEEEEcCC-C-------cEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH--H
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFPG-G-------QQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK--A  467 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~~-~-------~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~--~  467 (626)
                      .++|.+.+.||+|+||.||+|+... +       ..||+|.+........+.+.+|+..      +|++++.+.+..  .
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   86 (289)
T 4fvq_A            7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE   86 (289)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred             hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence            3578889999999999999998743 3       5799999987666666778777654      777777765443  2


Q ss_pred             HHHhhccccCCCcccC-------CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCc--------EEEE
Q 006915          468 FVREMKTFSDPTLSAL-------LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMN--------PKIS  532 (626)
Q Consensus       468 ~~~~~~~~~~~~l~~~-------l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~--------~kl~  532 (626)
                      ++.+++++.++++..+       +++..++.++.||+.||.|||+.+   |+||||||+|||++.++.        +||+
T Consensus        87 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~  163 (289)
T 4fvq_A           87 NILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLS  163 (289)
T ss_dssp             CEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEEECCBGGGTBCCEEEEC
T ss_pred             CEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCC---eECCCcCcceEEEecCCcccccccceeeec
Confidence            3345666666665432       778889999999999999999998   999999999999998887        9999


Q ss_pred             ecCcchhccc------------ccc------------------------C------CCCC---------------hHHHH
Q 006915          533 DFGLALDMMD------------QKL------------------------H------ASSK---------------PNEIL  555 (626)
Q Consensus       533 DFGla~~~~~------------~~~------------------------~------~~~~---------------~~~~~  555 (626)
                      |||++.....            ++.                        .      ....               .....
T Consensus       164 Dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (289)
T 4fvq_A          164 DPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQLPAPKAA  243 (289)
T ss_dssp             CCCSCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCSSC
T ss_pred             cCcccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhhccCCCCCCCCH
Confidence            9999822110            000                        0      0000               00112


Q ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 006915          556 KCINVGLLCVQEDPNDRPTMSDVVIMLGSEA  586 (626)
Q Consensus       556 ~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~  586 (626)
                      .+.+++..||+.||.+||++.++++.|+.+.
T Consensus       244 ~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~  274 (289)
T 4fvq_A          244 ELANLINNCMDYEPDHRPSFRAIIRDLNSLF  274 (289)
T ss_dssp             TTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence            3567788999999999999999999998774

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.86  E-value=1.6e-22  Score=208.50  Aligned_cols=132  Identities=27%  Similarity=0.386  Sum_probs=105.8

Q ss_pred             hcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCC--CcccHHHHHHHHHh------ccccceecchHH--HHHHhh
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSA--SGQGLEEFKNEIET------SNSNATIGANVK--AFVREM  472 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~--~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~  472 (626)
                      .++|.+.+.||+|+||.||+|++ .+++.||||++...  .....+.+.+|++.      +|++++.+....  .++.++
T Consensus        14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~   93 (328)
T 3fe3_A           14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM   93 (328)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence            46899999999999999999997 57999999999753  22344556666654      777777765432  233456


Q ss_pred             ccccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcch
Q 006915          473 KTFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLAL  538 (626)
Q Consensus       473 ~~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~  538 (626)
                      +++.++++..      .+++.....++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||++.
T Consensus        94 e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~  162 (328)
T 3fe3_A           94 EYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFSN  162 (328)
T ss_dssp             CCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSTTCCG
T ss_pred             ECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCCHHHEEEcCCCCEEEeeccCce
Confidence            6666666533      4778889999999999999999998   9999999999999999999999999983

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.86  E-value=1e-22  Score=208.48  Aligned_cols=181  Identities=26%  Similarity=0.362  Sum_probs=132.6

Q ss_pred             hhcCccccccccccCeEEEEEEEc------CCCcEEEEEEecCCC-cccHHHHHHHHHh------ccccceecchHH--H
Q 006915          403 ATDNFSEANKLGKGGFGPVYKAKF------PGGQQIAVKRLSSAS-GQGLEEFKNEIET------SNSNATIGANVK--A  467 (626)
Q Consensus       403 ~~~~f~~~~~lG~G~fG~Vy~~~~------~~~~~vAvK~l~~~~-~~~~~~~~~e~~~------~~~~~~~~~~~~--~  467 (626)
                      ..++|.+.+.||+|+||.||+|+.      .+++.||||.+.... ....+.+.+|++.      +|++++++.+..  .
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~  100 (314)
T 2ivs_A           21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP  100 (314)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred             chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCc
Confidence            356789999999999999999986      235789999997543 3345667777764      677777654322  2


Q ss_pred             HHHhhccccCCCcc------------------------------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCC
Q 006915          468 FVREMKTFSDPTLS------------------------------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLK  517 (626)
Q Consensus       468 ~~~~~~~~~~~~l~------------------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk  517 (626)
                      ++.++++..++++.                              ..+++..++.++.||+.||.|||+++   |+|||||
T Consensus       101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dik  177 (314)
T 2ivs_A          101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK---LVHRDLA  177 (314)
T ss_dssp             CEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT---EECCCCS
T ss_pred             eEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC---Ccccccc
Confidence            22334444433332                              22678889999999999999999998   9999999


Q ss_pred             CCCeEECCCCcEEEEecCcchhc---------------------------------------------cc-cccC-----
Q 006915          518 TSNILLDQEMNPKISDFGLALDM---------------------------------------------MD-QKLH-----  546 (626)
Q Consensus       518 p~NILl~~~~~~kl~DFGla~~~---------------------------------------------~~-~~~~-----  546 (626)
                      |+|||++.++.+||+|||++..+                                             +. ....     
T Consensus       178 p~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~  257 (314)
T 2ivs_A          178 ARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP  257 (314)
T ss_dssp             GGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred             hheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence            99999999999999999988211                                             11 0000     


Q ss_pred             -------------CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 006915          547 -------------ASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEA  586 (626)
Q Consensus       547 -------------~~~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~  586 (626)
                                   ...+......+.+++..|++.||.+||++.++++.|+.+.
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~  310 (314)
T 2ivs_A          258 PERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMM  310 (314)
T ss_dssp             GGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHhhcCCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence                         0011122345778888999999999999999999998764

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.86  E-value=1.3e-22  Score=210.60  Aligned_cols=184  Identities=24%  Similarity=0.323  Sum_probs=130.4

Q ss_pred             hhcCccccccccccCeEEEEEEEc------CCCcEEEEEEecCCC-cccHHHHHHHHH-------hccccceecchHH--
Q 006915          403 ATDNFSEANKLGKGGFGPVYKAKF------PGGQQIAVKRLSSAS-GQGLEEFKNEIE-------TSNSNATIGANVK--  466 (626)
Q Consensus       403 ~~~~f~~~~~lG~G~fG~Vy~~~~------~~~~~vAvK~l~~~~-~~~~~~~~~e~~-------~~~~~~~~~~~~~--  466 (626)
                      ..++|.+.+.||+|+||.||+|+.      .++..||||.+.... ....+.+.+|+.       +++++++++.+..  
T Consensus        43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~  122 (344)
T 1rjb_A           43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG  122 (344)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence            457899999999999999999986      235689999997532 233445555543       5777777765432  


Q ss_pred             HHHHhhccccCCCcc-----------------------------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCC
Q 006915          467 AFVREMKTFSDPTLS-----------------------------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLK  517 (626)
Q Consensus       467 ~~~~~~~~~~~~~l~-----------------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk  517 (626)
                      .++.+++++.++++.                             ..+++..++.++.||+.||+|||+.+   |+|||||
T Consensus       123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dik  199 (344)
T 1rjb_A          123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLA  199 (344)
T ss_dssp             SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT---EEETTCS
T ss_pred             ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCC
Confidence            222334444443332                             23688899999999999999999998   9999999


Q ss_pred             CCCeEECCCCcEEEEecCcchhc---------------------------------------------cc-cccC-----
Q 006915          518 TSNILLDQEMNPKISDFGLALDM---------------------------------------------MD-QKLH-----  546 (626)
Q Consensus       518 p~NILl~~~~~~kl~DFGla~~~---------------------------------------------~~-~~~~-----  546 (626)
                      |+|||++.++.+||+|||++..+                                             +. ....     
T Consensus       200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~  279 (344)
T 1rjb_A          200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP  279 (344)
T ss_dssp             GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred             hhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCC
Confidence            99999999999999999998211                                             11 0000     


Q ss_pred             --------------CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccccC
Q 006915          547 --------------ASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNL  589 (626)
Q Consensus       547 --------------~~~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~~~~  589 (626)
                                    ...+......+..++..||+.||.+||++.+++..|+......
T Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~  336 (344)
T 1rjb_A          280 VDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADA  336 (344)
T ss_dssp             CSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred             cHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHH
Confidence                          0001112345777888999999999999999999998875433

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.86  E-value=6.4e-23  Score=210.85  Aligned_cols=186  Identities=22%  Similarity=0.362  Sum_probs=136.2

Q ss_pred             HHHHHhhcCccccccccccCeEEEEEEEcC------CCcEEEEEEecCCC-cccHHHHHHHHHh------ccccceecch
Q 006915          398 ESILAATDNFSEANKLGKGGFGPVYKAKFP------GGQQIAVKRLSSAS-GQGLEEFKNEIET------SNSNATIGAN  464 (626)
Q Consensus       398 ~~l~~~~~~f~~~~~lG~G~fG~Vy~~~~~------~~~~vAvK~l~~~~-~~~~~~~~~e~~~------~~~~~~~~~~  464 (626)
                      +++....++|.+.+.||+|+||.||+|+..      +++.||||.+.... ......+.+|+..      ++++++++..
T Consensus        18 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~   97 (322)
T 1p4o_A           18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV   97 (322)
T ss_dssp             CTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEE
T ss_pred             hhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEE
Confidence            344456678999999999999999999764      36789999997543 2344567778764      6666666543


Q ss_pred             HH--HHHHhhccccCCCccc----------------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCC
Q 006915          465 VK--AFVREMKTFSDPTLSA----------------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQE  526 (626)
Q Consensus       465 ~~--~~~~~~~~~~~~~l~~----------------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~  526 (626)
                      ..  .++.+++++.++++..                .+++..++.++.||+.||.|||+.+   |+||||||+|||++.+
T Consensus        98 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~NIli~~~  174 (322)
T 1p4o_A           98 SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAED  174 (322)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCSGGGEEECTT
T ss_pred             ccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---CccCCCccceEEEcCC
Confidence            32  2233455555555433                3477888999999999999999998   9999999999999999


Q ss_pred             CcEEEEecCcchhcccc----------------------------------------------ccC-C------------
Q 006915          527 MNPKISDFGLALDMMDQ----------------------------------------------KLH-A------------  547 (626)
Q Consensus       527 ~~~kl~DFGla~~~~~~----------------------------------------------~~~-~------------  547 (626)
                      +.+||+|||++..+...                                              ... .            
T Consensus       175 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~  254 (322)
T 1p4o_A          175 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM  254 (322)
T ss_dssp             CCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHH
T ss_pred             CeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHH
Confidence            99999999998321110                                              000 0            


Q ss_pred             -----CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 006915          548 -----SSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEA  586 (626)
Q Consensus       548 -----~~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~  586 (626)
                           ..+......+.+++..|++.+|.+||++.++++.|+...
T Consensus       255 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~  298 (322)
T 1p4o_A          255 EGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEM  298 (322)
T ss_dssp             TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGS
T ss_pred             cCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhh
Confidence                 001111234677888999999999999999999998874

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.86  E-value=6.2e-23  Score=211.44  Aligned_cols=180  Identities=21%  Similarity=0.301  Sum_probs=128.6

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCc----EEEEEEecCCC-cccHHH------HHHHHHhccccceecchHH-HHHHh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQ----QIAVKRLSSAS-GQGLEE------FKNEIETSNSNATIGANVK-AFVRE  471 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~----~vAvK~l~~~~-~~~~~~------~~~e~~~~~~~~~~~~~~~-~~~~~  471 (626)
                      ++|.+.+.||+|+||.||+|++. +++    .||+|.+.... ......      ....+.++|++++++.+.. .++.+
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v   92 (325)
T 3kex_A           13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQLV   92 (325)
T ss_dssp             TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECBSSEEEE
T ss_pred             hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCccEEE
Confidence            57888999999999999999874 344    38888876432 122222      2333456888888876533 22344


Q ss_pred             hccccCCCcc-------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhccccc
Q 006915          472 MKTFSDPTLS-------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQK  544 (626)
Q Consensus       472 ~~~~~~~~l~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~  544 (626)
                      ++++.++++.       ..+++..++.++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++..+....
T Consensus        93 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~  169 (325)
T 3kex_A           93 TQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDD  169 (325)
T ss_dssp             EECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTT---CCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCT
T ss_pred             EEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCC---CCCCccchheEEECCCCeEEECCCCcccccCccc
Confidence            5666655553       34778889999999999999999998   9999999999999999999999999984321110


Q ss_pred             ----------------------------------------------cCC-CCC-----------------hHHHHHHHHH
Q 006915          545 ----------------------------------------------LHA-SSK-----------------PNEILKCINV  560 (626)
Q Consensus       545 ----------------------------------------------~~~-~~~-----------------~~~~~~~~~~  560 (626)
                                                                    ... ...                 ......+..+
T Consensus       170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  249 (325)
T 3kex_A          170 KQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTIDVYMV  249 (325)
T ss_dssp             TCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTCBCCCCTTBCTTTTHH
T ss_pred             ccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCCCCcCcHHHHHH
Confidence                                                          000 000                 0011134557


Q ss_pred             HHHhcccCCCCCCCHHHHHHHhccccc
Q 006915          561 GLLCVQEDPNDRPTMSDVVIMLGSEAM  587 (626)
Q Consensus       561 ~~~C~~~~p~~RPs~~~vl~~L~~~~~  587 (626)
                      +..||+.||.+||++.++++.|.....
T Consensus       250 i~~~l~~dp~~Rps~~el~~~l~~~~~  276 (325)
T 3kex_A          250 MVKCWMIDENIRPTFKELANEFTRMAR  276 (325)
T ss_dssp             HHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred             HHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            778999999999999999999987643

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.86  E-value=8.3e-23  Score=210.68  Aligned_cols=181  Identities=25%  Similarity=0.384  Sum_probs=130.6

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCc----EEEEEEecCC-CcccHHHHHHHHHh------ccccceecchHH-HHHH
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQ----QIAVKRLSSA-SGQGLEEFKNEIET------SNSNATIGANVK-AFVR  470 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~----~vAvK~l~~~-~~~~~~~~~~e~~~------~~~~~~~~~~~~-~~~~  470 (626)
                      .++|++.+.||+|+||.||+|++. +++    .||+|.+... ......++.+|+..      ++++++++.+.. ....
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~   93 (327)
T 3lzb_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQL   93 (327)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSSEEE
T ss_pred             HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCCceE
Confidence            357999999999999999999874 344    4688887643 34456778888764      666666654432 1122


Q ss_pred             hhccccCCCcc-------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhc---
Q 006915          471 EMKTFSDPTLS-------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM---  540 (626)
Q Consensus       471 ~~~~~~~~~l~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~---  540 (626)
                      .++++..+++.       ..+++..++.++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++..+   
T Consensus        94 v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~  170 (327)
T 3lzb_A           94 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE  170 (327)
T ss_dssp             EECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTC-------
T ss_pred             EEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCC---CcCCCCCHHHEEEcCCCCEEEccCcceeEccCc
Confidence            34444444442       34778899999999999999999998   999999999999999999999999998211   


Q ss_pred             ------------------------------------------cc-cccC------------------CCCChHHHHHHHH
Q 006915          541 ------------------------------------------MD-QKLH------------------ASSKPNEILKCIN  559 (626)
Q Consensus       541 ------------------------------------------~~-~~~~------------------~~~~~~~~~~~~~  559 (626)
                                                                +. ....                  ...+......+..
T Consensus       171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  250 (327)
T 3lzb_A          171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYM  250 (327)
T ss_dssp             ---------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTBCHHHHH
T ss_pred             cccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHH
Confidence                                                      11 0000                  0111122335777


Q ss_pred             HHHHhcccCCCCCCCHHHHHHHhccccc
Q 006915          560 VGLLCVQEDPNDRPTMSDVVIMLGSEAM  587 (626)
Q Consensus       560 ~~~~C~~~~p~~RPs~~~vl~~L~~~~~  587 (626)
                      ++..||+.||.+||++.++++.|..+..
T Consensus       251 li~~~l~~dp~~Rps~~ell~~L~~~~~  278 (327)
T 3lzb_A          251 IMRKCWMIDADSRPKFRELIIEFSKMAR  278 (327)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred             HHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence            8889999999999999999999988753

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.86  E-value=1.6e-22  Score=208.54  Aligned_cols=133  Identities=27%  Similarity=0.437  Sum_probs=102.3

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC-cccHHHHHHHHHh------ccccceecchHHH--------
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS-GQGLEEFKNEIET------SNSNATIGANVKA--------  467 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~e~~~------~~~~~~~~~~~~~--------  467 (626)
                      .++|++.+.||+|+||.||+|+.. +++.||||+++... ....+.+.+|++.      +|++++++.....        
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~   84 (332)
T 3qd2_B            5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE   84 (332)
T ss_dssp             HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred             hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence            457889999999999999999985 69999999997533 3345677788764      7777776643110        


Q ss_pred             ---------------------------------------------------HHHhhccccCCCcccC---------CCHH
Q 006915          468 ---------------------------------------------------FVREMKTFSDPTLSAL---------LHWE  487 (626)
Q Consensus       468 ---------------------------------------------------~~~~~~~~~~~~l~~~---------l~~~  487 (626)
                                                                         ++..++++.++++..+         ..+.
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~  164 (332)
T 3qd2_B           85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG  164 (332)
T ss_dssp             HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred             hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence                                                               1233455555554332         3456


Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchh
Q 006915          488 MRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALD  539 (626)
Q Consensus       488 ~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~  539 (626)
                      .++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||++..
T Consensus       165 ~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~  213 (332)
T 3qd2_B          165 VCLHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTA  213 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             HHHHHHHHHHHHHHHHHhCC---eeecCCCcccEEEeCCCCEEEeecCcccc
Confidence            68899999999999999998   99999999999999999999999999843

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.86  E-value=3.5e-22  Score=205.90  Aligned_cols=131  Identities=31%  Similarity=0.471  Sum_probs=106.5

Q ss_pred             hcCccccccccccCeEEEEEEEc-----CCCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH----HH
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKF-----PGGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK----AF  468 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~-----~~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~----~~  468 (626)
                      .++|++.+.||+|+||.||++++     .+++.||||++........+.+.+|++.      ++++++.+.+..    .+
T Consensus        40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~  119 (326)
T 2w1i_A           40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL  119 (326)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred             HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence            35688899999999999999984     3588999999987666666778888765      677777664332    23


Q ss_pred             HHhhccccCCCccc-------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          469 VREMKTFSDPTLSA-------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       469 ~~~~~~~~~~~l~~-------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +.+++++.++++..       .+++..++.++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus       120 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~~kL~Dfg~~  192 (326)
T 2w1i_A          120 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLT  192 (326)
T ss_dssp             EEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTC
T ss_pred             EEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---EeccCCCcceEEEcCCCcEEEecCcch
Confidence            34556666666532       3788999999999999999999998   999999999999999999999999988

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.86  E-value=2.6e-22  Score=210.17  Aligned_cols=186  Identities=20%  Similarity=0.275  Sum_probs=131.5

Q ss_pred             hhcCccccccccccCeEEEEEEEcCC------CcEEEEEEecCCCcccHH--HHHHHH---------------Hhccccc
Q 006915          403 ATDNFSEANKLGKGGFGPVYKAKFPG------GQQIAVKRLSSASGQGLE--EFKNEI---------------ETSNSNA  459 (626)
Q Consensus       403 ~~~~f~~~~~lG~G~fG~Vy~~~~~~------~~~vAvK~l~~~~~~~~~--~~~~e~---------------~~~~~~~  459 (626)
                      ..++|.+.+.||+|+||.||+|.+..      ++.||||++.........  ++..++               .++|+++
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~  112 (364)
T 3op5_A           33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK  112 (364)
T ss_dssp             TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred             CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence            35689999999999999999998854      478999998764422111  111111               1467777


Q ss_pred             eecchHHH------HHHhhccccCCCcc-------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEEC--
Q 006915          460 TIGANVKA------FVREMKTFSDPTLS-------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLD--  524 (626)
Q Consensus       460 ~~~~~~~~------~~~~~~~~~~~~l~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~--  524 (626)
                      +++.+...      ++.+++++ ++++.       ..+++..++.|+.||+.||+|||+.+   |+||||||+|||++  
T Consensus       113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~---iiHrDlkp~Nill~~~  188 (364)
T 3op5_A          113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHE---YVHGDIKASNLLLNYK  188 (364)
T ss_dssp             EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEESS
T ss_pred             EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---eEEecCCHHHEEEecC
Confidence            77654431      33445555 44443       34789999999999999999999998   99999999999999  


Q ss_pred             CCCcEEEEecCcchhccccc--------------------------------------------------cCCC---CCh
Q 006915          525 QEMNPKISDFGLALDMMDQK--------------------------------------------------LHAS---SKP  551 (626)
Q Consensus       525 ~~~~~kl~DFGla~~~~~~~--------------------------------------------------~~~~---~~~  551 (626)
                      .++.+||+|||+++.+....                                                  .+..   ...
T Consensus       189 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~  268 (364)
T 3op5_A          189 NPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDP  268 (364)
T ss_dssp             CTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH
T ss_pred             CCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCH
Confidence            88999999999983221110                                                  0000   000


Q ss_pred             -------------------------HHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccccCCCC
Q 006915          552 -------------------------NEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATP  592 (626)
Q Consensus       552 -------------------------~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~~~~~~~  592 (626)
                                               .....+..++..||+.+|.+||++.++++.|+.........
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~~  334 (364)
T 3op5_A          269 KYVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGSK  334 (364)
T ss_dssp             HHHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCC
Confidence                                     00234677888999999999999999999998876554443

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.86  E-value=1.6e-22  Score=206.95  Aligned_cols=183  Identities=26%  Similarity=0.355  Sum_probs=133.0

Q ss_pred             hhcCccccccccccCeEEEEEEEc------CCCcEEEEEEecCCCc-ccHHHHHHHHH-------hccccceecchHH--
Q 006915          403 ATDNFSEANKLGKGGFGPVYKAKF------PGGQQIAVKRLSSASG-QGLEEFKNEIE-------TSNSNATIGANVK--  466 (626)
Q Consensus       403 ~~~~f~~~~~lG~G~fG~Vy~~~~------~~~~~vAvK~l~~~~~-~~~~~~~~e~~-------~~~~~~~~~~~~~--  466 (626)
                      ..++|.+.+.||+|+||.||+|+.      .+++.||||.+..... ...+.+.+|+.       +++++++++.+..  
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~  100 (313)
T 1t46_A           21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG  100 (313)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC
Confidence            346789999999999999999984      3467999999985432 33455666654       5777777765432  


Q ss_pred             HHHHhhccccCCCcc------------------------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeE
Q 006915          467 AFVREMKTFSDPTLS------------------------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNIL  522 (626)
Q Consensus       467 ~~~~~~~~~~~~~l~------------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIL  522 (626)
                      .++.+++++.++++.                        ..+++..++.++.||+.||.|||+.+   |+||||||+|||
T Consensus       101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil  177 (313)
T 1t46_A          101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNIL  177 (313)
T ss_dssp             SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEE
T ss_pred             CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEE
Confidence            222333444333332                        23789999999999999999999998   999999999999


Q ss_pred             ECCCCcEEEEecCcchhc---------------------------------------------cc-cccC----------
Q 006915          523 LDQEMNPKISDFGLALDM---------------------------------------------MD-QKLH----------  546 (626)
Q Consensus       523 l~~~~~~kl~DFGla~~~---------------------------------------------~~-~~~~----------  546 (626)
                      ++.++.+||+|||++..+                                             +. ....          
T Consensus       178 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~  257 (313)
T 1t46_A          178 LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKF  257 (313)
T ss_dssp             EETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHH
T ss_pred             EcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHH
Confidence            999999999999988211                                             10 0000          


Q ss_pred             ---------CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccccc
Q 006915          547 ---------ASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMN  588 (626)
Q Consensus       547 ---------~~~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~~~  588 (626)
                               ...+......+.+++..|++.||.+||++.++++.|+....+
T Consensus       258 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~  308 (313)
T 1t46_A          258 YKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE  308 (313)
T ss_dssp             HHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHhccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence                     000111223577888899999999999999999999887543

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.86  E-value=4.5e-22  Score=205.75  Aligned_cols=132  Identities=27%  Similarity=0.398  Sum_probs=101.8

Q ss_pred             HhhcCccccccccccCeEEEEEEEcCCCcEEEEEEecCCCcccHHHHHHHH--------HhccccceecchHH------H
Q 006915          402 AATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEI--------ETSNSNATIGANVK------A  467 (626)
Q Consensus       402 ~~~~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~e~--------~~~~~~~~~~~~~~------~  467 (626)
                      ...++|++.+.||+|+||.||+|+.. ++.||||++....   ...+..|.        .++|++++++....      .
T Consensus        34 ~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~  109 (337)
T 3mdy_A           34 TIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQ  109 (337)
T ss_dssp             THHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCE
T ss_pred             ccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCc
Confidence            34568999999999999999999985 8999999986432   22233332        34677777655432      2


Q ss_pred             HHHhhccccCCCcccC-----CCHHHHHHHHHHHHHHHHHHHhCC-----CCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          468 FVREMKTFSDPTLSAL-----LHWEMRFNIIIGIARGLLYLHQDS-----RLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       468 ~~~~~~~~~~~~l~~~-----l~~~~~~~i~~~ia~gL~yLH~~~-----~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++.+++++.++++..+     +++..++.++.|++.||.|||+..     .++|+||||||+|||++.++.+||+|||++
T Consensus       110 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a  189 (337)
T 3mdy_A          110 LYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA  189 (337)
T ss_dssp             EEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred             eEEEEeccCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCc
Confidence            3345666667666543     678899999999999999999881     113999999999999999999999999998

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.86  E-value=2.2e-22  Score=203.59  Aligned_cols=179  Identities=29%  Similarity=0.452  Sum_probs=128.5

Q ss_pred             hcCccccccccccCeEEEEEEEcCCCcEEEEEEecCCC--cccHHHHHHHHHh------ccccceecchHH-HHHHhhcc
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSAS--GQGLEEFKNEIET------SNSNATIGANVK-AFVREMKT  474 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~--~~~~~~~~~e~~~------~~~~~~~~~~~~-~~~~~~~~  474 (626)
                      .++|.+.+.||+|+||.||+|+..  ..||||.++...  ....+.|.+|+..      +|++.+.+.... .++.++++
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~lv~e~  100 (289)
T 3og7_A           23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIVTQW  100 (289)
T ss_dssp             TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEEC
T ss_pred             ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccCCccEEEEEe
Confidence            467899999999999999999874  369999997532  3345677778765      666666654332 22234455


Q ss_pred             ccCCCcc-------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhcc------
Q 006915          475 FSDPTLS-------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMM------  541 (626)
Q Consensus       475 ~~~~~l~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~------  541 (626)
                      +.++++.       ..+++..++.++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++....      
T Consensus       101 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  177 (289)
T 3og7_A          101 CEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSH  177 (289)
T ss_dssp             CCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEEEECCCC------------
T ss_pred             cCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCC---cccccCccceEEECCCCCEEEccceeccccccccccc
Confidence            5444432       34778899999999999999999998   9999999999999999999999999872110      


Q ss_pred             ------------ccc------------------------------cCC-----------------------CCChHHHHH
Q 006915          542 ------------DQK------------------------------LHA-----------------------SSKPNEILK  556 (626)
Q Consensus       542 ------------~~~------------------------------~~~-----------------------~~~~~~~~~  556 (626)
                                  .++                              ...                       .........
T Consensus       178 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (289)
T 3og7_A          178 QFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKR  257 (289)
T ss_dssp             ------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTTSCHH
T ss_pred             cccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhccccCCHH
Confidence                        000                              000                       000112245


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHHhccccc
Q 006915          557 CINVGLLCVQEDPNDRPTMSDVVIMLGSEAM  587 (626)
Q Consensus       557 ~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~~  587 (626)
                      +.+++..|++.+|.+||++.++++.|+.+..
T Consensus       258 l~~li~~~l~~~p~~Rps~~ell~~L~~l~~  288 (289)
T 3og7_A          258 MKRLMAECLKKKRDERPSFPRILAEIEELAR  288 (289)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             HHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence            7788889999999999999999999987753

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.86  E-value=2.3e-22  Score=207.97  Aligned_cols=181  Identities=27%  Similarity=0.354  Sum_probs=131.1

Q ss_pred             hcCccccccccccCeEEEEEEEcC--------CCcEEEEEEecCCC-cccHHHHHHHHH-------hccccceecchHH-
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP--------GGQQIAVKRLSSAS-GQGLEEFKNEIE-------TSNSNATIGANVK-  466 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~--------~~~~vAvK~l~~~~-~~~~~~~~~e~~-------~~~~~~~~~~~~~-  466 (626)
                      .++|.+.+.||+|+||.||+|+..        ++..||||++.... ......+.+|++       +++++++++.+.. 
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~  113 (334)
T 2pvf_A           34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  113 (334)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence            468999999999999999999863        46789999997543 233455666654       4777777765432 


Q ss_pred             -HHHHhhccccCCCcc----------------------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEE
Q 006915          467 -AFVREMKTFSDPTLS----------------------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILL  523 (626)
Q Consensus       467 -~~~~~~~~~~~~~l~----------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl  523 (626)
                       .++.+++++.++++.                      ..+++..++.++.||+.||.|||+.+   |+||||||+|||+
T Consensus       114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll  190 (334)
T 2pvf_A          114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLV  190 (334)
T ss_dssp             SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEE
T ss_pred             CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCccceEEE
Confidence             222334444444432                      23788999999999999999999998   9999999999999


Q ss_pred             CCCCcEEEEecCcchhc---------------------------------------------cc-cccC-----------
Q 006915          524 DQEMNPKISDFGLALDM---------------------------------------------MD-QKLH-----------  546 (626)
Q Consensus       524 ~~~~~~kl~DFGla~~~---------------------------------------------~~-~~~~-----------  546 (626)
                      +.++.+||+|||++..+                                             +. ....           
T Consensus       191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~  270 (334)
T 2pvf_A          191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK  270 (334)
T ss_dssp             CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHH
T ss_pred             cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHH
Confidence            99999999999988211                                             10 0000           


Q ss_pred             -------CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccc
Q 006915          547 -------ASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAM  587 (626)
Q Consensus       547 -------~~~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~~  587 (626)
                             ...+......+..++..||+.+|.+||++.++++.|+.+..
T Consensus       271 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~  318 (334)
T 2pvf_A          271 LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT  318 (334)
T ss_dssp             HHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence                   00011112356778889999999999999999999998753

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.86  E-value=7.9e-23  Score=209.34  Aligned_cols=188  Identities=23%  Similarity=0.358  Sum_probs=133.3

Q ss_pred             HHHhhcCccccccccccCeEEEEEEEcC----CCcEEEEEEecCC--CcccHHHHHHHHHh------ccccceecchHHH
Q 006915          400 ILAATDNFSEANKLGKGGFGPVYKAKFP----GGQQIAVKRLSSA--SGQGLEEFKNEIET------SNSNATIGANVKA  467 (626)
Q Consensus       400 l~~~~~~f~~~~~lG~G~fG~Vy~~~~~----~~~~vAvK~l~~~--~~~~~~~~~~e~~~------~~~~~~~~~~~~~  467 (626)
                      +....++|.+.+.||+|+||.||+|+..    .++.||||.++..  .....+.+.+|+..      ++++++++.+...
T Consensus        29 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~  108 (313)
T 3brb_A           29 VVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEM  108 (313)
T ss_dssp             TBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-
T ss_pred             cccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeec
Confidence            3345678999999999999999999763    3458999999753  23344567777654      6777776654321


Q ss_pred             -------HHHhhccccCCCcc------------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCc
Q 006915          468 -------FVREMKTFSDPTLS------------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMN  528 (626)
Q Consensus       468 -------~~~~~~~~~~~~l~------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~  528 (626)
                             .+..++++.++++.            ..+++..++.++.||+.||.|||+.+   |+||||||+|||++.++.
T Consensus       109 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~  185 (313)
T 3brb_A          109 SSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN---FLHRDLAARNCMLRDDMT  185 (313)
T ss_dssp             ------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCSGGGEEECTTSC
T ss_pred             cccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCc
Confidence                   12344555544442            34788999999999999999999998   999999999999999999


Q ss_pred             EEEEecCcchhc---------------------------------------------cc-cccC----------------
Q 006915          529 PKISDFGLALDM---------------------------------------------MD-QKLH----------------  546 (626)
Q Consensus       529 ~kl~DFGla~~~---------------------------------------------~~-~~~~----------------  546 (626)
                      +||+|||++..+                                             +. ....                
T Consensus       186 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~  265 (313)
T 3brb_A          186 VCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHG  265 (313)
T ss_dssp             EEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTT
T ss_pred             EEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcC
Confidence            999999998221                                             11 0000                


Q ss_pred             --CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccccCC
Q 006915          547 --ASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLA  590 (626)
Q Consensus       547 --~~~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~~~~~  590 (626)
                        ...+......+.+++..|++.+|.+||++.+++..|+.+...++
T Consensus       266 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~lp  311 (313)
T 3brb_A          266 HRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLP  311 (313)
T ss_dssp             CCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred             CCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence              00111122457788889999999999999999999988765443

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.86  E-value=3.5e-22  Score=202.94  Aligned_cols=183  Identities=23%  Similarity=0.296  Sum_probs=134.1

Q ss_pred             cCccccccccccCeEEEEEEEcCC----CcEEEEEEecCCC-cccHHHHHHHHHh------ccccceecchHH---HHHH
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFPG----GQQIAVKRLSSAS-GQGLEEFKNEIET------SNSNATIGANVK---AFVR  470 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~~----~~~vAvK~l~~~~-~~~~~~~~~e~~~------~~~~~~~~~~~~---~~~~  470 (626)
                      ..|.+.+.||+|+||.||+|++.+    ...||||.+.... ....+.+.+|+..      +|++++.+.+..   ..+.
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  104 (298)
T 3f66_A           25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV  104 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred             eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence            458888999999999999998643    3368999998533 2344567777654      677777665332   2234


Q ss_pred             hhccccCCCccc-------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhcccc
Q 006915          471 EMKTFSDPTLSA-------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQ  543 (626)
Q Consensus       471 ~~~~~~~~~l~~-------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  543 (626)
                      .++++.++++..       .+++..++.++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||++..+.+.
T Consensus       105 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~  181 (298)
T 3f66_A          105 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDK  181 (298)
T ss_dssp             EEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECSCGGGCCCSCG
T ss_pred             EEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEECCCCCEEECccccccccccc
Confidence            556666655533       3678899999999999999999998   999999999999999999999999998321110


Q ss_pred             c------------------------------------------------cC------------------CCCChHHHHHH
Q 006915          544 K------------------------------------------------LH------------------ASSKPNEILKC  557 (626)
Q Consensus       544 ~------------------------------------------------~~------------------~~~~~~~~~~~  557 (626)
                      .                                                ..                  ...+......+
T Consensus       182 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  261 (298)
T 3f66_A          182 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPL  261 (298)
T ss_dssp             GGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTCCCCCCTTCCHHH
T ss_pred             chhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCCCCCCCccCCHHH
Confidence            0                                                00                  00011112357


Q ss_pred             HHHHHHhcccCCCCCCCHHHHHHHhccccccCC
Q 006915          558 INVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLA  590 (626)
Q Consensus       558 ~~~~~~C~~~~p~~RPs~~~vl~~L~~~~~~~~  590 (626)
                      .+++..|++.+|.+||++.++++.|+.+..++.
T Consensus       262 ~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~  294 (298)
T 3f66_A          262 YEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI  294 (298)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSC
T ss_pred             HHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence            788889999999999999999999998765444

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.86  E-value=1.4e-22  Score=204.28  Aligned_cols=180  Identities=21%  Similarity=0.281  Sum_probs=128.8

Q ss_pred             hcCccccccccccCeEEEEEEEcCC----CcEEEEEEecCCC-cccHHHHHHHHHh------ccccceecchHH-HHHHh
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFPG----GQQIAVKRLSSAS-GQGLEEFKNEIET------SNSNATIGANVK-AFVRE  471 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~~----~~~vAvK~l~~~~-~~~~~~~~~e~~~------~~~~~~~~~~~~-~~~~~  471 (626)
                      .++|.+.+.||+|+||.||+|++..    +..||||.+.... ....+.+.+|+..      +|++++++.... .++.+
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~lv   93 (281)
T 1mp8_A           14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWII   93 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSCEEE
T ss_pred             hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEccCccEEE
Confidence            4578899999999999999998743    4579999987543 3344567777654      777777765422 22234


Q ss_pred             hccccCCCccc-------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhc----
Q 006915          472 MKTFSDPTLSA-------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM----  540 (626)
Q Consensus       472 ~~~~~~~~l~~-------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~----  540 (626)
                      ++++.++++..       .+++..++.++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||++..+    
T Consensus        94 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  170 (281)
T 1mp8_A           94 MELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST  170 (281)
T ss_dssp             EECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECC-----------
T ss_pred             EecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHEEECCCCCEEECccccccccCccc
Confidence            55555544432       4788999999999999999999998   999999999999999999999999987211    


Q ss_pred             ----------------------------------------cc-cccC------------------CCCChHHHHHHHHHH
Q 006915          541 ----------------------------------------MD-QKLH------------------ASSKPNEILKCINVG  561 (626)
Q Consensus       541 ----------------------------------------~~-~~~~------------------~~~~~~~~~~~~~~~  561 (626)
                                                              +. ....                  ...+......+.+++
T Consensus       171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li  250 (281)
T 1mp8_A          171 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLM  250 (281)
T ss_dssp             --------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHH
T ss_pred             ccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcCCCCCCCCCCCHHHHHHH
Confidence                                                    10 0000                  001112234567888


Q ss_pred             HHhcccCCCCCCCHHHHHHHhcccc
Q 006915          562 LLCVQEDPNDRPTMSDVVIMLGSEA  586 (626)
Q Consensus       562 ~~C~~~~p~~RPs~~~vl~~L~~~~  586 (626)
                      ..|++.||.+||++.++++.|+.+.
T Consensus       251 ~~~l~~~p~~Rps~~~l~~~l~~~~  275 (281)
T 1mp8_A          251 TKCWAYDPSRRPRFTELKAQLSTIL  275 (281)
T ss_dssp             HHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHccCChhhCcCHHHHHHHHHHHH
Confidence            8999999999999999999998764

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.86  E-value=2.1e-22  Score=211.36  Aligned_cols=182  Identities=23%  Similarity=0.297  Sum_probs=132.1

Q ss_pred             CccccccccccCeEEEEEEEcC--C--CcEEEEEEecCCC-cccHHHHHHHHHh------ccccceecchHH---HHHHh
Q 006915          406 NFSEANKLGKGGFGPVYKAKFP--G--GQQIAVKRLSSAS-GQGLEEFKNEIET------SNSNATIGANVK---AFVRE  471 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~--~--~~~vAvK~l~~~~-~~~~~~~~~e~~~------~~~~~~~~~~~~---~~~~~  471 (626)
                      .|.+.+.||+|+||.||+|++.  +  +..||||.++... ....++|.+|+..      +|++++++.+..   .++.+
T Consensus        90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv  169 (373)
T 3c1x_A           90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV  169 (373)
T ss_dssp             EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred             eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence            4677789999999999999873  2  2468999997533 3456778888764      777777765432   23345


Q ss_pred             hccccCCCccc-------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhcccc-
Q 006915          472 MKTFSDPTLSA-------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQ-  543 (626)
Q Consensus       472 ~~~~~~~~l~~-------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~-  543 (626)
                      ++++.++++..       .+++..++.++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||+++.+.+. 
T Consensus       170 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~  246 (373)
T 3c1x_A          170 LPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE  246 (373)
T ss_dssp             EECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred             EECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCccchheEEECCCCCEEEeeccccccccccc
Confidence            66666666543       3568889999999999999999998   999999999999999999999999998321100 


Q ss_pred             -----------------------------------------------ccC------------------CCCChHHHHHHH
Q 006915          544 -----------------------------------------------KLH------------------ASSKPNEILKCI  558 (626)
Q Consensus       544 -----------------------------------------------~~~------------------~~~~~~~~~~~~  558 (626)
                                                                     ...                  ...+......+.
T Consensus       247 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~  326 (373)
T 3c1x_A          247 FDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY  326 (373)
T ss_dssp             -----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTCCCCCCTTCCHHHH
T ss_pred             cccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHH
Confidence                                                           000                  000111234577


Q ss_pred             HHHHHhcccCCCCCCCHHHHHHHhccccccCC
Q 006915          559 NVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLA  590 (626)
Q Consensus       559 ~~~~~C~~~~p~~RPs~~~vl~~L~~~~~~~~  590 (626)
                      +++..||+.+|.+||++.++++.|+.+...+.
T Consensus       327 ~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~  358 (373)
T 3c1x_A          327 EVMLKCWHPKAEMRPSFSELVSRISAIFSTFI  358 (373)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHHHHhcc
Confidence            88889999999999999999999998765444

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.86  E-value=5e-22  Score=198.30  Aligned_cols=179  Identities=23%  Similarity=0.366  Sum_probs=134.6

Q ss_pred             hcCccccccccccCeEEEEEEEcCCCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH--HHHHhhccc
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK--AFVREMKTF  475 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~~  475 (626)
                      .++|.+.+.||+|+||.||+|+..+++.||||.+.... ...+.+.+|++.      ++++++.+.+..  .++..++++
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   85 (267)
T 3t9t_A            7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM   85 (267)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTT-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred             hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence            35788899999999999999999888899999998643 234567777654      677777665432  223345555


Q ss_pred             cCCCcc-------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhc--------
Q 006915          476 SDPTLS-------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM--------  540 (626)
Q Consensus       476 ~~~~l~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~--------  540 (626)
                      .++++.       ..+++..++.++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||++...        
T Consensus        86 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~  162 (267)
T 3t9t_A           86 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS  162 (267)
T ss_dssp             TTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHST
T ss_pred             CCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEECCCCCEEEccccccccccccccccc
Confidence            555543       34778899999999999999999998   999999999999999999999999988321        


Q ss_pred             ------------------------------------cc-cccCC------------------CCChHHHHHHHHHHHHhc
Q 006915          541 ------------------------------------MD-QKLHA------------------SSKPNEILKCINVGLLCV  565 (626)
Q Consensus       541 ------------------------------------~~-~~~~~------------------~~~~~~~~~~~~~~~~C~  565 (626)
                                                          +. .....                  ..+......+.+++..|+
T Consensus       163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l  242 (267)
T 3t9t_A          163 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCW  242 (267)
T ss_dssp             TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHHT
T ss_pred             ccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCcCCCCccCcHHHHHHHHHHc
Confidence                                                11 00000                  001111235677888999


Q ss_pred             ccCCCCCCCHHHHHHHhcccc
Q 006915          566 QEDPNDRPTMSDVVIMLGSEA  586 (626)
Q Consensus       566 ~~~p~~RPs~~~vl~~L~~~~  586 (626)
                      +.+|.+||++.++++.|..+.
T Consensus       243 ~~~p~~Rps~~~ll~~L~~l~  263 (267)
T 3t9t_A          243 RERPEDRPAFSRLLRQLAEIA  263 (267)
T ss_dssp             CSSGGGSCCHHHHHHHHHHHH
T ss_pred             cCChhhCcCHHHHHHHHHHHH
Confidence            999999999999999998763

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.86  E-value=2.7e-22  Score=223.92  Aligned_cols=182  Identities=24%  Similarity=0.311  Sum_probs=136.7

Q ss_pred             cCccccc-cccccCeEEEEEEEcC---CCcEEEEEEecCCC-cccHHHHHHHHHh------ccccceecchHH-HHHHhh
Q 006915          405 DNFSEAN-KLGKGGFGPVYKAKFP---GGQQIAVKRLSSAS-GQGLEEFKNEIET------SNSNATIGANVK-AFVREM  472 (626)
Q Consensus       405 ~~f~~~~-~lG~G~fG~Vy~~~~~---~~~~vAvK~l~~~~-~~~~~~~~~e~~~------~~~~~~~~~~~~-~~~~~~  472 (626)
                      +++.+.+ .||+|+||.||+|.+.   ++..||||+++... ....++|.+|+++      +|++++++.+.. .++.++
T Consensus       335 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~lv~  414 (613)
T 2ozo_A          335 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVM  414 (613)
T ss_dssp             TSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEESSSEEEEE
T ss_pred             cceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEeccCCeEEEE
Confidence            4444445 7999999999999874   46689999998643 3456788888765      778888776543 233456


Q ss_pred             ccccCCCccc-------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhc-----
Q 006915          473 KTFSDPTLSA-------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM-----  540 (626)
Q Consensus       473 ~~~~~~~l~~-------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~-----  540 (626)
                      +++.++++..       .+++..++.++.||+.||+|||+.+   |+||||||+||||+.++.+||+|||+++.+     
T Consensus       415 E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~  491 (613)
T 2ozo_A          415 EMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN---FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDS  491 (613)
T ss_dssp             ECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCSTTTTCC----
T ss_pred             EeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCc
Confidence            6666666533       3778999999999999999999998   999999999999999999999999998321     


Q ss_pred             -----------------------------------------cc-ccc------------------CCCCChHHHHHHHHH
Q 006915          541 -----------------------------------------MD-QKL------------------HASSKPNEILKCINV  560 (626)
Q Consensus       541 -----------------------------------------~~-~~~------------------~~~~~~~~~~~~~~~  560 (626)
                                                               +. ...                  ....+......+.++
T Consensus       492 ~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~l  571 (613)
T 2ozo_A          492 YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYAL  571 (613)
T ss_dssp             ----------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTTCCCCCCTTCCHHHHHH
T ss_pred             eeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHH
Confidence                                                     10 000                  001111223467788


Q ss_pred             HHHhcccCCCCCCCHHHHHHHhccccccC
Q 006915          561 GLLCVQEDPNDRPTMSDVVIMLGSEAMNL  589 (626)
Q Consensus       561 ~~~C~~~~p~~RPs~~~vl~~L~~~~~~~  589 (626)
                      +..||+.+|.+||++.++++.|+.....+
T Consensus       572 i~~cl~~dP~~RPs~~~l~~~L~~~~~~~  600 (613)
T 2ozo_A          572 MSDCWIYKWEDRPDFLTVEQRMRACYYSL  600 (613)
T ss_dssp             HHHTTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred             HHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence            88999999999999999999998865433

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.86  E-value=3.4e-22  Score=207.54  Aligned_cols=129  Identities=23%  Similarity=0.298  Sum_probs=99.4

Q ss_pred             hcCccccccccccCeEEEEEEEcCCCcEEEEEEecCC--CcccHHHHHHHHHh--------ccccceecchHH--HHHHh
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSA--SGQGLEEFKNEIET--------SNSNATIGANVK--AFVRE  471 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~--~~~~~~~~~~e~~~--------~~~~~~~~~~~~--~~~~~  471 (626)
                      .+.|++.+.||+|+||.||++...+++.||||++...  .....+.+.+|+..        ++++.+.+....  .++.+
T Consensus         8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv   87 (343)
T 3dbq_A            8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV   87 (343)
T ss_dssp             SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence            4569999999999999999999988999999998743  23344566667653        456666654332  12223


Q ss_pred             hccccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          472 MKTFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       472 ~~~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++ +.++++.      ..+++..+..++.||+.||.|||+.+   |+||||||+|||++ ++.+||+|||++
T Consensus        88 ~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~---iiHrDikp~NIll~-~~~~kl~DFG~a  154 (343)
T 3dbq_A           88 ME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIA  154 (343)
T ss_dssp             EC-CCSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEE-TTEEEECCCSSS
T ss_pred             Ee-CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEE-CCcEEEeecccc
Confidence            33 3333332      34788899999999999999999998   99999999999997 578999999998

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.85  E-value=4.3e-22  Score=202.13  Aligned_cols=182  Identities=26%  Similarity=0.361  Sum_probs=135.8

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHHHHh------ccccceecchHH--HHHHh
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNEIET------SNSNATIGANVK--AFVRE  471 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~  471 (626)
                      .++|++.+.||+|+||.||+|+.. +++.||||.+....   ....+.+.+|+..      +|++++++....  .++.+
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv   89 (294)
T 4eqm_A           10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV   89 (294)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred             hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence            357999999999999999999874 58999999986432   2334567777654      677777665432  23345


Q ss_pred             hccccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhcccc--
Q 006915          472 MKTFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQ--  543 (626)
Q Consensus       472 ~~~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~--  543 (626)
                      ++++.++++..      .+++..++.++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||++..+...  
T Consensus        90 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  166 (294)
T 4eqm_A           90 MEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMR---IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSL  166 (294)
T ss_dssp             EECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCSSSTTC-----
T ss_pred             EeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEEeCCCccccccccc
Confidence            66666666654      3788999999999999999999998   999999999999999999999999998321110  


Q ss_pred             ------------------------------------------ccCCC---------------C-------ChHHHHHHHH
Q 006915          544 ------------------------------------------KLHAS---------------S-------KPNEILKCIN  559 (626)
Q Consensus       544 ------------------------------------------~~~~~---------------~-------~~~~~~~~~~  559 (626)
                                                                ..+..               .       .......+..
T Consensus       167 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  246 (294)
T 4eqm_A          167 TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSN  246 (294)
T ss_dssp             --------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSCHHHHH
T ss_pred             cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCCHHHHH
Confidence                                                      00000               0       0011235677


Q ss_pred             HHHHhcccCCCCCC-CHHHHHHHhcccccc
Q 006915          560 VGLLCVQEDPNDRP-TMSDVVIMLGSEAMN  588 (626)
Q Consensus       560 ~~~~C~~~~p~~RP-s~~~vl~~L~~~~~~  588 (626)
                      ++..|++.||.+|| ++.++...|.....+
T Consensus       247 li~~~l~~dp~~R~~~~~~l~~~l~~~~~~  276 (294)
T 4eqm_A          247 VILRATEKDKANRYKTIQEMKDDLSSVLHE  276 (294)
T ss_dssp             HHHHHSCSSGGGSCSSHHHHHHHHHTSSSS
T ss_pred             HHHHHhcCCHhHccccHHHHHHHHHHHHhh
Confidence            88899999999999 899999999887543

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.85  E-value=9.7e-22  Score=203.30  Aligned_cols=128  Identities=32%  Similarity=0.560  Sum_probs=99.6

Q ss_pred             hcCccccccccccCeEEEEEEEcCCCcEEEEEEecCCCcccHHHHHHHH--------HhccccceecchHH-------HH
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEI--------ETSNSNATIGANVK-------AF  468 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~e~--------~~~~~~~~~~~~~~-------~~  468 (626)
                      .++|++.+.||+|+||.||+|+. +++.||||++....   ...+..|.        .++|++++++....       .+
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~   87 (336)
T 3g2f_A           12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY   87 (336)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred             hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence            46789999999999999999987 67999999997532   23333332        23666666542211       22


Q ss_pred             HHhhccccCCCcccC-----CCHHHHHHHHHHHHHHHHHHHhC---------CCCceEecCCCCCCeEECCCCcEEEEec
Q 006915          469 VREMKTFSDPTLSAL-----LHWEMRFNIIIGIARGLLYLHQD---------SRLRIIHRDLKTSNILLDQEMNPKISDF  534 (626)
Q Consensus       469 ~~~~~~~~~~~l~~~-----l~~~~~~~i~~~ia~gL~yLH~~---------~~~~ivHrDlkp~NILl~~~~~~kl~DF  534 (626)
                      +.+++++.++++..+     +++..+..++.||+.||.|||+.         +   |+||||||+|||++.++.+||+||
T Consensus        88 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~---ivH~Dikp~Nill~~~~~~kL~DF  164 (336)
T 3g2f_A           88 LLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPA---ISHRDLNSRNVLVKNDGTCVISDF  164 (336)
T ss_dssp             EEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCC---EECSSCSGGGEEECTTSCEEECCC
T ss_pred             EEEEecCCCCcHHHHHhhcccchhHHHHHHHHHHHHHHHHHhhhccccccccc---eeecccccceEEEcCCCcEEEeec
Confidence            355677777776543     46888899999999999999998         6   999999999999999999999999


Q ss_pred             Ccch
Q 006915          535 GLAL  538 (626)
Q Consensus       535 Gla~  538 (626)
                      |++.
T Consensus       165 G~a~  168 (336)
T 3g2f_A          165 GLSM  168 (336)
T ss_dssp             TTCE
T ss_pred             ccee
Confidence            9983

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.85  E-value=5e-22  Score=201.70  Aligned_cols=183  Identities=27%  Similarity=0.329  Sum_probs=132.6

Q ss_pred             CccccccccccCeEEEEEEEcCC----CcEEEEEEecCCCc-ccHHHHHHHHHh------ccccceecchHH---HHHHh
Q 006915          406 NFSEANKLGKGGFGPVYKAKFPG----GQQIAVKRLSSASG-QGLEEFKNEIET------SNSNATIGANVK---AFVRE  471 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~~----~~~vAvK~l~~~~~-~~~~~~~~e~~~------~~~~~~~~~~~~---~~~~~  471 (626)
                      .|...+.||+|+||.||+|++.+    +..||||.+..... ...+.+.+|+..      +|++.+.+....   ..+..
T Consensus        22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v  101 (298)
T 3pls_A           22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL  101 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred             EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence            45666899999999999998632    33799999985432 345667777653      677777665432   11234


Q ss_pred             hccccCCCcc-------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhccccc
Q 006915          472 MKTFSDPTLS-------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQK  544 (626)
Q Consensus       472 ~~~~~~~~l~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~  544 (626)
                      ++++.++++.       ..+++..++.++.|++.||+|||+.+   |+||||||+|||++.++.+||+|||++..+.+..
T Consensus       102 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~  178 (298)
T 3pls_A          102 LPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQK---FVHRDLAARNCMLDESFTVKVADFGLARDILDRE  178 (298)
T ss_dssp             ECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGG
T ss_pred             EecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCcEEeCcCCCcccccCCc
Confidence            4555555543       34678899999999999999999998   9999999999999999999999999983221100


Q ss_pred             c------------------------------------------------------------------CCCCChHHHHHHH
Q 006915          545 L------------------------------------------------------------------HASSKPNEILKCI  558 (626)
Q Consensus       545 ~------------------------------------------------------------------~~~~~~~~~~~~~  558 (626)
                      .                                                                  ....+......+.
T Consensus       179 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  258 (298)
T 3pls_A          179 YYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPDSLY  258 (298)
T ss_dssp             GGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCCCCCCTTCCHHHH
T ss_pred             ccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCCCCCCccchHHHH
Confidence            0                                                                  0000111123577


Q ss_pred             HHHHHhcccCCCCCCCHHHHHHHhccccccCCC
Q 006915          559 NVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLAT  591 (626)
Q Consensus       559 ~~~~~C~~~~p~~RPs~~~vl~~L~~~~~~~~~  591 (626)
                      +++..|++.+|.+||++.++++.|+.+...+..
T Consensus       259 ~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~  291 (298)
T 3pls_A          259 QVMQQCWEADPAVRPTFRVLVGEVEQIVSALLG  291 (298)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCS
T ss_pred             HHHHHHccCChhhCcCHHHHHHHHHHHHHHHhc
Confidence            888899999999999999999999988655543

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.85  E-value=2.1e-22  Score=206.29  Aligned_cols=188  Identities=28%  Similarity=0.367  Sum_probs=136.7

Q ss_pred             CHHHHHHhhcCccccccccccCeEEEEEEEc------CCCcEEEEEEecCCCc-ccHHHHHHHHH-------hcccccee
Q 006915          396 DFESILAATDNFSEANKLGKGGFGPVYKAKF------PGGQQIAVKRLSSASG-QGLEEFKNEIE-------TSNSNATI  461 (626)
Q Consensus       396 ~~~~l~~~~~~f~~~~~lG~G~fG~Vy~~~~------~~~~~vAvK~l~~~~~-~~~~~~~~e~~-------~~~~~~~~  461 (626)
                      ...+.....++|.+.+.||+|+||.||+|+.      .+++.||||.+..... ...+.+.+|+.       ++++++++
T Consensus        18 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~   97 (316)
T 2xir_A           18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL   97 (316)
T ss_dssp             CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             cccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEE
Confidence            4445555678899999999999999999974      3468999999986432 23455666664       36777777


Q ss_pred             cchHH---HHHHhhccccCCCccc----------------------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCC
Q 006915          462 GANVK---AFVREMKTFSDPTLSA----------------------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDL  516 (626)
Q Consensus       462 ~~~~~---~~~~~~~~~~~~~l~~----------------------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDl  516 (626)
                      +.+..   .++..++++.++++..                      .+++..++.++.||+.||.|||+.+   |+||||
T Consensus        98 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~di  174 (316)
T 2xir_A           98 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDL  174 (316)
T ss_dssp             EEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT---CCCSCC
T ss_pred             EEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC---cccccC
Confidence            65432   1233344444433321                      2678899999999999999999998   999999


Q ss_pred             CCCCeEECCCCcEEEEecCcchhc---------------------------------------------cc-cccCC---
Q 006915          517 KTSNILLDQEMNPKISDFGLALDM---------------------------------------------MD-QKLHA---  547 (626)
Q Consensus       517 kp~NILl~~~~~~kl~DFGla~~~---------------------------------------------~~-~~~~~---  547 (626)
                      ||+|||++.++.+||+|||++..+                                             +. .....   
T Consensus       175 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~  254 (316)
T 2xir_A          175 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV  254 (316)
T ss_dssp             SGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             ccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCccc
Confidence            999999999999999999988211                                             11 00000   


Q ss_pred             ----------------CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 006915          548 ----------------SSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEA  586 (626)
Q Consensus       548 ----------------~~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~  586 (626)
                                      ..+......+.+++..||+.||.+||++.++++.|+.+.
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~  309 (316)
T 2xir_A          255 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL  309 (316)
T ss_dssp             CCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             chhHHHHHHhccCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence                            001112235778888999999999999999999998764

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.85  E-value=5.8e-22  Score=199.89  Aligned_cols=175  Identities=22%  Similarity=0.339  Sum_probs=128.9

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCC--CcccHHHHHHHH-------HhccccceecchHH--HHHHh
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSA--SGQGLEEFKNEI-------ETSNSNATIGANVK--AFVRE  471 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~--~~~~~~~~~~e~-------~~~~~~~~~~~~~~--~~~~~  471 (626)
                      .++|.+.+.||+|+||.||+|+.. +++.||||++...  ......++.+|+       .+++++++.+....  .++.+
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv   89 (289)
T 1x8b_A           10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ   89 (289)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred             cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence            467899999999999999999985 6899999999753  223445666666       45788887765432  23344


Q ss_pred             hccccCCCcc----------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECC----------------
Q 006915          472 MKTFSDPTLS----------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQ----------------  525 (626)
Q Consensus       472 ~~~~~~~~l~----------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~----------------  525 (626)
                      ++++.++++.          ..+++..+..++.||+.||.|||+.+   |+||||||+|||++.                
T Consensus        90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~  166 (289)
T 1x8b_A           90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEEGDEDDW  166 (289)
T ss_dssp             EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEC-----------------
T ss_pred             EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeecCCCHHHEEEcCCCCCcccccccccccc
Confidence            5666666654          34688899999999999999999998   999999999999984                


Q ss_pred             ---CCcEEEEecCcchhcccc------------cc-------------------------------------------CC
Q 006915          526 ---EMNPKISDFGLALDMMDQ------------KL-------------------------------------------HA  547 (626)
Q Consensus       526 ---~~~~kl~DFGla~~~~~~------------~~-------------------------------------------~~  547 (626)
                         ...+||+|||++......            +.                                           ..
T Consensus       167 ~~~~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~  246 (289)
T 1x8b_A          167 ASNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWHEIRQGRLP  246 (289)
T ss_dssp             ---CCCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHHHHHHTTCCC
T ss_pred             cCCceEEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHHHHHHcCCCC
Confidence               447999999987211100            00                                           00


Q ss_pred             CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 006915          548 SSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIM  581 (626)
Q Consensus       548 ~~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~  581 (626)
                      ..+......+.+++..|++.||.+||++.++++.
T Consensus       247 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  280 (289)
T 1x8b_A          247 RIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH  280 (289)
T ss_dssp             CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred             CCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence            0111122457778889999999999999999864

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.85  E-value=2.9e-22  Score=209.43  Aligned_cols=142  Identities=27%  Similarity=0.333  Sum_probs=106.6

Q ss_pred             CCCccCHHHHHHhhcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCCcccHHHHHHHHH-----------hcccc
Q 006915          391 DLPFIDFESILAATDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQGLEEFKNEIE-----------TSNSN  458 (626)
Q Consensus       391 ~~~~~~~~~l~~~~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~~~~~~~~~e~~-----------~~~~~  458 (626)
                      +...+++.+.....++|.+.++||+|+||.||+|+. .+++.||||+++... .....+..|+.           ++|++
T Consensus        21 ~~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~h~~iv   99 (360)
T 3llt_A           21 EIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK-KYTRSAKIEADILKKIQNDDINNNNIV   99 (360)
T ss_dssp             GGGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH-HHHHHHHHHHHHHHHTCCCSTTGGGBC
T ss_pred             cceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccch-hhhhhhHHHHHHHHHhcccCCCCCCee
Confidence            344566666667788999999999999999999988 468999999997432 22233333332           56777


Q ss_pred             ceecchHH--HHHHhhccccCCCccc--------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECC---
Q 006915          459 ATIGANVK--AFVREMKTFSDPTLSA--------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQ---  525 (626)
Q Consensus       459 ~~~~~~~~--~~~~~~~~~~~~~l~~--------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~---  525 (626)
                      ++.+....  .++.+++++ ++++..        .+++..+..++.||+.||+|||+.+   |+||||||+|||++.   
T Consensus       100 ~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~  175 (360)
T 3llt_A          100 KYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMS---LTHTDLKPENILLDDPYF  175 (360)
T ss_dssp             CEEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCTTC
T ss_pred             cccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCcccEEEccccc
Confidence            77664332  222334444 444322        3778899999999999999999998   999999999999975   


Q ss_pred             ----------------------CCcEEEEecCcc
Q 006915          526 ----------------------EMNPKISDFGLA  537 (626)
Q Consensus       526 ----------------------~~~~kl~DFGla  537 (626)
                                            ++.+||+|||++
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a  209 (360)
T 3llt_A          176 EKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCA  209 (360)
T ss_dssp             CEEEEEEECTTTCCEEEEEEESCCCEEECCCTTC
T ss_pred             cccccchhcccccccccccccCCCCEEEEeccCc
Confidence                                  788999999998

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.85  E-value=3.9e-22  Score=206.18  Aligned_cols=181  Identities=24%  Similarity=0.343  Sum_probs=130.9

Q ss_pred             hcCccccccccccCeEEEEEEEcCC-----CcEEEEEEecCCC-cccHHHHHHHHHh------ccccceecchHH--HHH
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFPG-----GQQIAVKRLSSAS-GQGLEEFKNEIET------SNSNATIGANVK--AFV  469 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~~-----~~~vAvK~l~~~~-~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~  469 (626)
                      .+.|.+.+.||+|+||.||+|+...     +..||||.++... ......+.+|+..      ++++++.+.+..  .++
T Consensus        43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  122 (333)
T 1mqb_A           43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM  122 (333)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred             hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcE
Confidence            3567888999999999999998742     2469999998543 2344567777654      677777665432  223


Q ss_pred             HhhccccCCCcc-------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhc--
Q 006915          470 REMKTFSDPTLS-------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM--  540 (626)
Q Consensus       470 ~~~~~~~~~~l~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~--  540 (626)
                      .+++++.++++.       ..+++..++.++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++..+  
T Consensus       123 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~  199 (333)
T 1mqb_A          123 IITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLED  199 (333)
T ss_dssp             EEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCCCC------
T ss_pred             EEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChheEEECCCCcEEECCCCcchhhcc
Confidence            345555554443       24778999999999999999999998   999999999999999999999999988221  


Q ss_pred             --------------------------------------------cc-cccC------------------CCCChHHHHHH
Q 006915          541 --------------------------------------------MD-QKLH------------------ASSKPNEILKC  557 (626)
Q Consensus       541 --------------------------------------------~~-~~~~------------------~~~~~~~~~~~  557 (626)
                                                                  +. ....                  ...+......+
T Consensus       200 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~l  279 (333)
T 1mqb_A          200 DPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAI  279 (333)
T ss_dssp             -----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTCBHHH
T ss_pred             ccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCCCcCCCcccCCHHH
Confidence                                                        10 0000                  00011122456


Q ss_pred             HHHHHHhcccCCCCCCCHHHHHHHhccccc
Q 006915          558 INVGLLCVQEDPNDRPTMSDVVIMLGSEAM  587 (626)
Q Consensus       558 ~~~~~~C~~~~p~~RPs~~~vl~~L~~~~~  587 (626)
                      .+++..||+.+|.+||++.+++..|+.+..
T Consensus       280 ~~li~~~l~~~p~~Rps~~~l~~~L~~~~~  309 (333)
T 1mqb_A          280 YQLMMQCWQQERARRPKFADIVSILDKLIR  309 (333)
T ss_dssp             HHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            788889999999999999999999988653

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.85  E-value=3.8e-22  Score=202.06  Aligned_cols=183  Identities=22%  Similarity=0.306  Sum_probs=132.6

Q ss_pred             hhcCccccc-cccccCeEEEEEEEc---CCCcEEEEEEecCCC--cccHHHHHHHHHh------ccccceecchHH-HHH
Q 006915          403 ATDNFSEAN-KLGKGGFGPVYKAKF---PGGQQIAVKRLSSAS--GQGLEEFKNEIET------SNSNATIGANVK-AFV  469 (626)
Q Consensus       403 ~~~~f~~~~-~lG~G~fG~Vy~~~~---~~~~~vAvK~l~~~~--~~~~~~~~~e~~~------~~~~~~~~~~~~-~~~  469 (626)
                      ..++|.+.+ .||+|+||.||+|.+   ..++.||||.++...  ....+++.+|+..      ++++++++.+.. .++
T Consensus        14 ~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   93 (291)
T 1xbb_A           14 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWM   93 (291)
T ss_dssp             CGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESSSEE
T ss_pred             cchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEECCCCcE
Confidence            345677777 999999999999964   246899999997543  2235667777664      677777765422 222


Q ss_pred             HhhccccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhc---
Q 006915          470 REMKTFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM---  540 (626)
Q Consensus       470 ~~~~~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~---  540 (626)
                      .+++++.++++..      .+++..++.++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++..+   
T Consensus        94 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~  170 (291)
T 1xbb_A           94 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRAD  170 (291)
T ss_dssp             EEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEECCTT
T ss_pred             EEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCC---eEcCCCCcceEEEeCCCcEEEccCCcceeeccC
Confidence            3455555555433      3788999999999999999999998   999999999999999999999999987211   


Q ss_pred             -------------------------------------------cc-cccC------------------CCCChHHHHHHH
Q 006915          541 -------------------------------------------MD-QKLH------------------ASSKPNEILKCI  558 (626)
Q Consensus       541 -------------------------------------------~~-~~~~------------------~~~~~~~~~~~~  558 (626)
                                                                 +. ....                  ...+......+.
T Consensus       171 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  250 (291)
T 1xbb_A          171 ENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMY  250 (291)
T ss_dssp             CSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHH
T ss_pred             CCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHH
Confidence                                                       11 0000                  001111234577


Q ss_pred             HHHHHhcccCCCCCCCHHHHHHHhcccccc
Q 006915          559 NVGLLCVQEDPNDRPTMSDVVIMLGSEAMN  588 (626)
Q Consensus       559 ~~~~~C~~~~p~~RPs~~~vl~~L~~~~~~  588 (626)
                      +++..||+.||.+||++.++++.|+.....
T Consensus       251 ~li~~~l~~dp~~Rps~~~l~~~L~~~~~~  280 (291)
T 1xbb_A          251 DLMNLCWTYDVENRPGFAAVELRLRNYYYD  280 (291)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence            888899999999999999999999886543

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.85  E-value=1.1e-22  Score=205.62  Aligned_cols=181  Identities=23%  Similarity=0.335  Sum_probs=134.2

Q ss_pred             hhcCccccccccccCeEEEEEEEcCC-CcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH--HHHHhhc
Q 006915          403 ATDNFSEANKLGKGGFGPVYKAKFPG-GQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK--AFVREMK  473 (626)
Q Consensus       403 ~~~~f~~~~~lG~G~fG~Vy~~~~~~-~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~  473 (626)
                      ..++|++.+.||+|+||.||+|+... +..||||.+.... ...+.+.+|++.      ++++++.+.+..  .++.+++
T Consensus        11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   89 (288)
T 3kfa_A           11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE   89 (288)
T ss_dssp             CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred             cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEE
Confidence            45678999999999999999999854 8899999997543 344566666554      677777665432  2223445


Q ss_pred             cccCCCcc--------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhc-----
Q 006915          474 TFSDPTLS--------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM-----  540 (626)
Q Consensus       474 ~~~~~~l~--------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~-----  540 (626)
                      ++.++++.        ..+++..++.++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++...     
T Consensus        90 ~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~  166 (288)
T 3kfa_A           90 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY  166 (288)
T ss_dssp             CCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHT---CCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSS
T ss_pred             cCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCC---ccCCCCCcceEEEcCCCCEEEccCccceeccCCcc
Confidence            44444432        33788899999999999999999998   999999999999999999999999988211     


Q ss_pred             ---------------------------------------cc-ccc------------------CCCCChHHHHHHHHHHH
Q 006915          541 ---------------------------------------MD-QKL------------------HASSKPNEILKCINVGL  562 (626)
Q Consensus       541 ---------------------------------------~~-~~~------------------~~~~~~~~~~~~~~~~~  562 (626)
                                                             +. ...                  ....+......+.+++.
T Consensus       167 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  246 (288)
T 3kfa_A          167 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMR  246 (288)
T ss_dssp             EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHH
T ss_pred             ccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhccCCCCCCCCCCHHHHHHHH
Confidence                                                   11 000                  00111112245778888


Q ss_pred             HhcccCCCCCCCHHHHHHHhccccc
Q 006915          563 LCVQEDPNDRPTMSDVVIMLGSEAM  587 (626)
Q Consensus       563 ~C~~~~p~~RPs~~~vl~~L~~~~~  587 (626)
                      .|++.||.+||++.++++.|+....
T Consensus       247 ~~l~~dp~~Rps~~~~~~~l~~~~~  271 (288)
T 3kfa_A          247 ACWQWNPSDRPSFAEIHQAFETMFQ  271 (288)
T ss_dssp             HHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHhCCChhhCcCHHHHHHHHHHHHH
Confidence            9999999999999999999987643

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.85  E-value=3.3e-22  Score=223.87  Aligned_cols=174  Identities=24%  Similarity=0.312  Sum_probs=130.8

Q ss_pred             ccccccCeEEEEEEEcC---CCcEEEEEEecCCC--cccHHHHHHHHHh------ccccceecchHH-HHHHhhccccCC
Q 006915          411 NKLGKGGFGPVYKAKFP---GGQQIAVKRLSSAS--GQGLEEFKNEIET------SNSNATIGANVK-AFVREMKTFSDP  478 (626)
Q Consensus       411 ~~lG~G~fG~Vy~~~~~---~~~~vAvK~l~~~~--~~~~~~~~~e~~~------~~~~~~~~~~~~-~~~~~~~~~~~~  478 (626)
                      ++||+|+||.||+|.+.   .++.||||+++...  ....++|.+|+++      +|++++++.+.. .++.+++++.++
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~lv~E~~~~g  454 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELG  454 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEECCTTE
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEEEccCCC
Confidence            47999999999999653   46789999998543  2345677777664      788888776533 223456666666


Q ss_pred             Cccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhccc----------
Q 006915          479 TLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD----------  542 (626)
Q Consensus       479 ~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~----------  542 (626)
                      ++..      .+++..++.|+.||+.||+|||+.+   |+||||||+||||+.++.+||+|||+++.+..          
T Consensus       455 ~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~---iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~  531 (635)
T 4fl3_A          455 PLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH  531 (635)
T ss_dssp             EHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC----------
T ss_pred             CHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccccC
Confidence            5543      4788999999999999999999998   99999999999999999999999999832110          


Q ss_pred             -------------------------------------cccC------------------CCCChHHHHHHHHHHHHhccc
Q 006915          543 -------------------------------------QKLH------------------ASSKPNEILKCINVGLLCVQE  567 (626)
Q Consensus       543 -------------------------------------~~~~------------------~~~~~~~~~~~~~~~~~C~~~  567 (626)
                                                           ....                  ...+......+.+++..||+.
T Consensus       532 ~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~  611 (635)
T 4fl3_A          532 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTY  611 (635)
T ss_dssp             ---CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCS
T ss_pred             CCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCC
Confidence                                                 0000                  001112224567888899999


Q ss_pred             CCCCCCCHHHHHHHhccccc
Q 006915          568 DPNDRPTMSDVVIMLGSEAM  587 (626)
Q Consensus       568 ~p~~RPs~~~vl~~L~~~~~  587 (626)
                      ||.+||++.++++.|+....
T Consensus       612 dP~~RPs~~~l~~~L~~~~~  631 (635)
T 4fl3_A          612 DVENRPGFAAVELRLRNYYY  631 (635)
T ss_dssp             STTTSCCHHHHHHHHHHHHH
T ss_pred             CHhHCcCHHHHHHHHHHHHH
Confidence            99999999999999987643

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.85  E-value=5.5e-22  Score=199.44  Aligned_cols=176  Identities=22%  Similarity=0.348  Sum_probs=130.7

Q ss_pred             hcCccccccccccCeEEEEEEEcCCCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH---HHHHhhcc
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK---AFVREMKT  474 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~---~~~~~~~~  474 (626)
                      .++|++.+.||+|+||.||+|+.. ++.||||.++...  ..+.+.+|++.      ++++++.+....   .++..+++
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~   96 (278)
T 1byg_A           20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY   96 (278)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred             hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence            457899999999999999999884 7899999997543  44567777654      677777765332   23345566


Q ss_pred             ccCCCcccC--------CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchh-------
Q 006915          475 FSDPTLSAL--------LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALD-------  539 (626)
Q Consensus       475 ~~~~~l~~~--------l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~-------  539 (626)
                      +.++++..+        +++..++.++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||++..       
T Consensus        97 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~  173 (278)
T 1byg_A           97 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT  173 (278)
T ss_dssp             CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEECCCCC----------
T ss_pred             CCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCCcceEEEeCCCcEEEeeccccccccccccC
Confidence            655555433        677788999999999999999998   99999999999999999999999998721       


Q ss_pred             ---------------------------------ccc-cccC------------------CCCChHHHHHHHHHHHHhccc
Q 006915          540 ---------------------------------MMD-QKLH------------------ASSKPNEILKCINVGLLCVQE  567 (626)
Q Consensus       540 ---------------------------------~~~-~~~~------------------~~~~~~~~~~~~~~~~~C~~~  567 (626)
                                                       ++. ....                  ...+......+.+++..||+.
T Consensus       174 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~  253 (278)
T 1byg_A          174 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHL  253 (278)
T ss_dssp             --CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCCCCCTTCCHHHHHHHHHHTCS
T ss_pred             CCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCcccCCHHHHHHHHHHhcC
Confidence                                             111 1000                  011112234577888899999


Q ss_pred             CCCCCCCHHHHHHHhccc
Q 006915          568 DPNDRPTMSDVVIMLGSE  585 (626)
Q Consensus       568 ~p~~RPs~~~vl~~L~~~  585 (626)
                      ||.+||++.++++.|+.+
T Consensus       254 ~p~~Rps~~~l~~~L~~i  271 (278)
T 1byg_A          254 DAAMRPSFLQLREQLEHI  271 (278)
T ss_dssp             SGGGSCCHHHHHHHHHHH
T ss_pred             ChhhCCCHHHHHHHHHHH
Confidence            999999999999999875

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.85  E-value=4.9e-22  Score=200.81  Aligned_cols=186  Identities=24%  Similarity=0.310  Sum_probs=135.6

Q ss_pred             cCccccc-cccccCeEEEEEEEcC---CCcEEEEEEecCCC-cccHHHHHHHHHh------ccccceecchHH-HHHHhh
Q 006915          405 DNFSEAN-KLGKGGFGPVYKAKFP---GGQQIAVKRLSSAS-GQGLEEFKNEIET------SNSNATIGANVK-AFVREM  472 (626)
Q Consensus       405 ~~f~~~~-~lG~G~fG~Vy~~~~~---~~~~vAvK~l~~~~-~~~~~~~~~e~~~------~~~~~~~~~~~~-~~~~~~  472 (626)
                      ++|.+.+ .||+|+||.||+|.+.   ++..||||.++... ....+.+.+|++.      ++++++++.+.. .++.++
T Consensus         9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~lv~   88 (287)
T 1u59_A            9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVM   88 (287)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEE
T ss_pred             HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEecCCCcEEEE
Confidence            4565655 9999999999999863   57889999998643 3345567777654      777777765422 222344


Q ss_pred             ccccCCCcc-------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhc-----
Q 006915          473 KTFSDPTLS-------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM-----  540 (626)
Q Consensus       473 ~~~~~~~l~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~-----  540 (626)
                      +++.++++.       ..+++..++.++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++..+     
T Consensus        89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~  165 (287)
T 1u59_A           89 EMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDS  165 (287)
T ss_dssp             ECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEEETTEEEECCCTTCEECTTCSC
T ss_pred             EeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCchheEEEcCCCCEEECcccceeeeccCcc
Confidence            555444432       34788999999999999999999998   999999999999999999999999987211     


Q ss_pred             -----------------------------------------cc-cccC------------------CCCChHHHHHHHHH
Q 006915          541 -----------------------------------------MD-QKLH------------------ASSKPNEILKCINV  560 (626)
Q Consensus       541 -----------------------------------------~~-~~~~------------------~~~~~~~~~~~~~~  560 (626)
                                                               +. ....                  ...+......+.++
T Consensus       166 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~l  245 (287)
T 1u59_A          166 YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYAL  245 (287)
T ss_dssp             EECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCCCCTTCCHHHHHH
T ss_pred             eeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcCCcCCCCCCcCHHHHHH
Confidence                                                     11 1000                  01111223456778


Q ss_pred             HHHhcccCCCCCCCHHHHHHHhccccccCCCCC
Q 006915          561 GLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPK  593 (626)
Q Consensus       561 ~~~C~~~~p~~RPs~~~vl~~L~~~~~~~~~~~  593 (626)
                      +..||+.+|.+||++.++++.|..+..+...+.
T Consensus       246 i~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~~  278 (287)
T 1u59_A          246 MSDCWIYKWEDRPDFLTVEQRMRACYYSLASKV  278 (287)
T ss_dssp             HHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHcCCChhhCcCHHHHHHHHHHHHHhcCCcc
Confidence            889999999999999999999998865555443

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.85  E-value=3.3e-22  Score=206.58  Aligned_cols=182  Identities=25%  Similarity=0.358  Sum_probs=132.1

Q ss_pred             HhhcCccccccccccCeEEEEEEEcCC------CcEEEEEEecCCCc-ccHHHHHHHHH-------hccccceecchHH-
Q 006915          402 AATDNFSEANKLGKGGFGPVYKAKFPG------GQQIAVKRLSSASG-QGLEEFKNEIE-------TSNSNATIGANVK-  466 (626)
Q Consensus       402 ~~~~~f~~~~~lG~G~fG~Vy~~~~~~------~~~vAvK~l~~~~~-~~~~~~~~e~~-------~~~~~~~~~~~~~-  466 (626)
                      ...++|.+.+.||+|+||.||+|+...      ...||||.+..... ...+.+.+|+.       ++|++++++.+.. 
T Consensus        43 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~  122 (333)
T 2i1m_A           43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHG  122 (333)
T ss_dssp             CCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             CCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecC
Confidence            345789999999999999999998742      34899999975432 33455666654       5777777765432 


Q ss_pred             -HHHHhhccccCCCcc--------------------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECC
Q 006915          467 -AFVREMKTFSDPTLS--------------------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQ  525 (626)
Q Consensus       467 -~~~~~~~~~~~~~l~--------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~  525 (626)
                       .++.+++++.++++.                    ..+++..++.++.||+.||.|||+.+   |+||||||+|||++.
T Consensus       123 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~  199 (333)
T 2i1m_A          123 GPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTN  199 (333)
T ss_dssp             SSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGCEEEG
T ss_pred             CceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC---cccCCcccceEEECC
Confidence             222334444444432                    23678889999999999999999998   999999999999999


Q ss_pred             CCcEEEEecCcchhccc------------------cc-----------------------cC-C----------------
Q 006915          526 EMNPKISDFGLALDMMD------------------QK-----------------------LH-A----------------  547 (626)
Q Consensus       526 ~~~~kl~DFGla~~~~~------------------~~-----------------------~~-~----------------  547 (626)
                      ++.+||+|||++..+..                  |.                       +. .                
T Consensus       200 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~  279 (333)
T 2i1m_A          200 GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKL  279 (333)
T ss_dssp             GGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHH
T ss_pred             CCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHH
Confidence            99999999999832110                  00                       00 0                


Q ss_pred             -------CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 006915          548 -------SSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEA  586 (626)
Q Consensus       548 -------~~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~  586 (626)
                             ..+......+..++..||+.+|.+||++.+++..|+...
T Consensus       280 ~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~  325 (333)
T 2i1m_A          280 VKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQA  325 (333)
T ss_dssp             HHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HhcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHH
Confidence                   001111245678888999999999999999999998764

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.85  E-value=1.4e-21  Score=200.04  Aligned_cols=130  Identities=28%  Similarity=0.398  Sum_probs=100.0

Q ss_pred             hcCccccccccccCeEEEEEEEcCCCcEEEEEEecCCCc--ccHHHHHHHHH------hccccceecchHH--HHHHhhc
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASG--QGLEEFKNEIE------TSNSNATIGANVK--AFVREMK  473 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~--~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~~  473 (626)
                      .++|++.+.||+|+||.||+|+..+++.||||++.....  .....+.+|++      ++|++++++....  .++.+++
T Consensus        20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   99 (311)
T 3niz_A           20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE   99 (311)
T ss_dssp             SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred             HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence            467999999999999999999998899999999974322  22345666655      4777777765432  1223334


Q ss_pred             cccCCCc-------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          474 TFSDPTL-------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       474 ~~~~~~l-------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++.+ ++       ...+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus       100 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a  166 (311)
T 3niz_A          100 FMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLA  166 (311)
T ss_dssp             CCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred             CCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCchHhEEECCCCCEEEccCcCc
Confidence            3332 21       223788999999999999999999998   999999999999999999999999998

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.85  E-value=7.3e-22  Score=208.61  Aligned_cols=129  Identities=23%  Similarity=0.293  Sum_probs=99.0

Q ss_pred             cCccccccccccCeEEEEEEEcCCCcEEEEEEecCC--CcccHHHHHHHHHh--------ccccceecchHH--HHHHhh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSA--SGQGLEEFKNEIET--------SNSNATIGANVK--AFVREM  472 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~--~~~~~~~~~~e~~~--------~~~~~~~~~~~~--~~~~~~  472 (626)
                      +.|.+.+.||+|+||.||++...+++.||||++...  .....+.+.+|+..        ++++++++....  .++.++
T Consensus        56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~  135 (390)
T 2zmd_A           56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM  135 (390)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence            459999999999999999999988999999999743  23345667777653        566666654332  222233


Q ss_pred             ccccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcch
Q 006915          473 KTFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLAL  538 (626)
Q Consensus       473 ~~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~  538 (626)
                      + +.++++.      ..+++..+..++.||+.||.|||+.+   |+||||||+|||++ ++.+||+|||++.
T Consensus       136 E-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~-~~~~kl~DFG~a~  202 (390)
T 2zmd_A          136 E-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIAN  202 (390)
T ss_dssp             E-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCCGGGEEES-SSCEEECCCSSSC
T ss_pred             e-cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEEE-CCeEEEEecCccc
Confidence            3 3333332      24678889999999999999999998   99999999999995 5889999999983

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.85  E-value=1.6e-21  Score=199.17  Aligned_cols=131  Identities=30%  Similarity=0.433  Sum_probs=97.3

Q ss_pred             hhcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCC-----cccHHHHHHH------HH---hccccceecchHH-
Q 006915          403 ATDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSAS-----GQGLEEFKNE------IE---TSNSNATIGANVK-  466 (626)
Q Consensus       403 ~~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~-----~~~~~~~~~e------~~---~~~~~~~~~~~~~-  466 (626)
                      ..++|++.+.||+|+||.||+|+. .+++.||||++....     ......+.+|      +.   ++|++++++.+.. 
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~   86 (308)
T 3g33_A            7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS   86 (308)
T ss_dssp             ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred             cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence            357899999999999999999997 468999999987321     1111222233      33   6888888765432 


Q ss_pred             ------HHHHhhccccCCCcc--------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEE
Q 006915          467 ------AFVREMKTFSDPTLS--------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKIS  532 (626)
Q Consensus       467 ------~~~~~~~~~~~~~l~--------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~  532 (626)
                            .++..+++.. +++.        ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+
T Consensus        87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl~  162 (308)
T 3g33_A           87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLA  162 (308)
T ss_dssp             CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCTTTEEECTTSCEEEC
T ss_pred             CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEEe
Confidence                  1223333333 2322        22789999999999999999999998   9999999999999999999999


Q ss_pred             ecCcc
Q 006915          533 DFGLA  537 (626)
Q Consensus       533 DFGla  537 (626)
                      |||++
T Consensus       163 Dfg~a  167 (308)
T 3g33_A          163 DFGLA  167 (308)
T ss_dssp             SCSCT
T ss_pred             eCccc
Confidence            99998

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.85  E-value=8.5e-22  Score=196.89  Aligned_cols=179  Identities=20%  Similarity=0.334  Sum_probs=133.9

Q ss_pred             cCccccccccccCeEEEEEEEcCCCcEEEEEEecCCC--cccHHHHHHHHHh------ccccceecchHH----HHHHhh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSAS--GQGLEEFKNEIET------SNSNATIGANVK----AFVREM  472 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~--~~~~~~~~~e~~~------~~~~~~~~~~~~----~~~~~~  472 (626)
                      ++|.+.+.||+|+||.||+|++. ++.||||++....  ....+.|.+|+..      +|++++.+.+..    .++..+
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   88 (271)
T 3kmu_A           10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT   88 (271)
T ss_dssp             GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred             HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence            56888899999999999999985 8899999998542  3445678888764      667777765432    223445


Q ss_pred             ccccCCCccc--------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchh-----
Q 006915          473 KTFSDPTLSA--------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALD-----  539 (626)
Q Consensus       473 ~~~~~~~l~~--------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~-----  539 (626)
                      +++.++++..        .+++..++.++.||+.||.|||+.+ ++|+||||||+|||++.++.+||+|||++..     
T Consensus        89 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~~~  167 (271)
T 3kmu_A           89 HWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLE-PLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPG  167 (271)
T ss_dssp             ECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSS-SCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSCTT
T ss_pred             cccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCC-CceecCCCccceEEEcCCcceeEEeccceeeecccC
Confidence            6665555532        3789999999999999999999874 4599999999999999999999998887610     


Q ss_pred             -----------c-------------------------cccc-------------------cCCCCChHHHHHHHHHHHHh
Q 006915          540 -----------M-------------------------MDQK-------------------LHASSKPNEILKCINVGLLC  564 (626)
Q Consensus       540 -----------~-------------------------~~~~-------------------~~~~~~~~~~~~~~~~~~~C  564 (626)
                                 .                         +...                   .....+......+.+++..|
T Consensus       168 ~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  247 (271)
T 3kmu_A          168 RMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISPHVSKLMKIC  247 (271)
T ss_dssp             CBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCCCCCTTCCHHHHHHHHHH
T ss_pred             ccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHH
Confidence                       0                         0000                   00111112234577888899


Q ss_pred             cccCCCCCCCHHHHHHHhccc
Q 006915          565 VQEDPNDRPTMSDVVIMLGSE  585 (626)
Q Consensus       565 ~~~~p~~RPs~~~vl~~L~~~  585 (626)
                      |+.||.+||++.++++.|+.+
T Consensus       248 l~~~p~~Rps~~~il~~L~~l  268 (271)
T 3kmu_A          248 MNEDPAKRPKFDMIVPILEKM  268 (271)
T ss_dssp             TCSSGGGSCCHHHHHHHHHHH
T ss_pred             cCCChhhCcCHHHHHHHHHHh
Confidence            999999999999999999875

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.85  E-value=6.9e-22  Score=202.05  Aligned_cols=181  Identities=19%  Similarity=0.300  Sum_probs=128.4

Q ss_pred             hcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCC---cccHHHHHHHHHh------ccccceecchHH--HHHHh
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSAS---GQGLEEFKNEIET------SNSNATIGANVK--AFVRE  471 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~---~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~  471 (626)
                      .++|.+.+.||+|+||.||+|.. .+++.||||++....   ......+.+|+..      ++++++.+.+..  .+...
T Consensus        31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv  110 (310)
T 2wqm_A           31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV  110 (310)
T ss_dssp             GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence            35799999999999999999987 468999999997532   2344567777654      667776654432  22234


Q ss_pred             hccccCCCcc----------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhcc
Q 006915          472 MKTFSDPTLS----------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMM  541 (626)
Q Consensus       472 ~~~~~~~~l~----------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~  541 (626)
                      ++++.++++.          ..+++..++.++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++..+.
T Consensus       111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~  187 (310)
T 2wqm_A          111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFS  187 (310)
T ss_dssp             EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred             EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence            5555555543          33678889999999999999999998   9999999999999999999999999872110


Q ss_pred             c-------------------------------------------cccC---------------------CCCChHHHHHH
Q 006915          542 D-------------------------------------------QKLH---------------------ASSKPNEILKC  557 (626)
Q Consensus       542 ~-------------------------------------------~~~~---------------------~~~~~~~~~~~  557 (626)
                      .                                           ....                     ..........+
T Consensus       188 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  267 (310)
T 2wqm_A          188 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEEL  267 (310)
T ss_dssp             -----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCSCCCCTTTSCHHH
T ss_pred             CCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccCCCCcccccCHHH
Confidence            0                                           0000                     00001122457


Q ss_pred             HHHHHHhcccCCCCCCCHHHHHHHhccccc
Q 006915          558 INVGLLCVQEDPNDRPTMSDVVIMLGSEAM  587 (626)
Q Consensus       558 ~~~~~~C~~~~p~~RPs~~~vl~~L~~~~~  587 (626)
                      .+++..||+.||.+||++.+++..|..+..
T Consensus       268 ~~li~~~l~~dp~~Rps~~~il~~l~~l~~  297 (310)
T 2wqm_A          268 RQLVNMCINPDPEKRPDVTYVYDVAKRMHA  297 (310)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence            788889999999999999999999988743

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.85  E-value=6.9e-22  Score=199.11  Aligned_cols=182  Identities=25%  Similarity=0.347  Sum_probs=132.5

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCcccHH--HHHHHHHhccccceecchHH--------------
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQGLE--EFKNEIETSNSNATIGANVK--------------  466 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~--~~~~e~~~~~~~~~~~~~~~--------------  466 (626)
                      .++|++.+.||+|+||.||+|+.. +++.||||.+.........  +....+.+++++++.+....              
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~   89 (284)
T 2a19_B           10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSR   89 (284)
T ss_dssp             HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCSGGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------C
T ss_pred             ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEeccccHHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccccc
Confidence            456889999999999999999985 6899999999865433222  23344456888877664321              


Q ss_pred             ----HHHHhhccccCCCcc--------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEec
Q 006915          467 ----AFVREMKTFSDPTLS--------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDF  534 (626)
Q Consensus       467 ----~~~~~~~~~~~~~l~--------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DF  534 (626)
                          .++.+++++.++++.        ..+++..++.++.||+.||.|||+.+   |+||||||+|||++.++.+||+||
T Consensus        90 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Df  166 (284)
T 2a19_B           90 SKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK---LINRDLKPSNIFLVDTKQVKIGDF  166 (284)
T ss_dssp             CEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCC
T ss_pred             cCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHEEEcCCCCEEECcc
Confidence                123445565555553        34778899999999999999999998   999999999999999999999999


Q ss_pred             CcchhccccccC--------------------------------------C-----------------CCChHHHHHHHH
Q 006915          535 GLALDMMDQKLH--------------------------------------A-----------------SSKPNEILKCIN  559 (626)
Q Consensus       535 Gla~~~~~~~~~--------------------------------------~-----------------~~~~~~~~~~~~  559 (626)
                      |++..+......                                      .                 ..+......+..
T Consensus       167 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (284)
T 2a19_B          167 GLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISDIFDKKEKT  246 (284)
T ss_dssp             TTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHHHTTCCCTTSCHHHHH
T ss_pred             hhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHHHHHHhhcccccccCCHHHHH
Confidence            987322111000                                      0                 000001123556


Q ss_pred             HHHHhcccCCCCCCCHHHHHHHhcccccc
Q 006915          560 VGLLCVQEDPNDRPTMSDVVIMLGSEAMN  588 (626)
Q Consensus       560 ~~~~C~~~~p~~RPs~~~vl~~L~~~~~~  588 (626)
                      ++..|++.||.+||++.++++.|......
T Consensus       247 li~~~l~~dp~~Rps~~e~l~~l~~~~~~  275 (284)
T 2a19_B          247 LLQKLLSKKPEDRPNTSEILRTLTVWKKS  275 (284)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHTC-
T ss_pred             HHHHHccCChhhCcCHHHHHHHHHHHhhC
Confidence            77889999999999999999999887433

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.84  E-value=2.5e-21  Score=198.79  Aligned_cols=130  Identities=22%  Similarity=0.287  Sum_probs=102.8

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC-cccHHHHHHHHH------hccccceecchHH----HHHHhh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS-GQGLEEFKNEIE------TSNSNATIGANVK----AFVREM  472 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~e~~------~~~~~~~~~~~~~----~~~~~~  472 (626)
                      ++|.+.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++      +++++++++....    .++.++
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   88 (319)
T 4euu_A            9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM   88 (319)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence            56889999999999999999985 48999999997533 233455666655      4777777764332    223455


Q ss_pred             ccccCCCccc---------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEE----CCCCcEEEEecCcc
Q 006915          473 KTFSDPTLSA---------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILL----DQEMNPKISDFGLA  537 (626)
Q Consensus       473 ~~~~~~~l~~---------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl----~~~~~~kl~DFGla  537 (626)
                      +++.++++..         .+++..++.++.||+.||.|||+.+   |+||||||+|||+    +.++.+||+|||++
T Consensus        89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a  163 (319)
T 4euu_A           89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA  163 (319)
T ss_dssp             ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEECTTSCEEEEECCCTTC
T ss_pred             eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEeccCCCCceEEEccCCCc
Confidence            6665555432         2789999999999999999999998   9999999999999    78888999999998

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.84  E-value=3.8e-22  Score=204.17  Aligned_cols=132  Identities=26%  Similarity=0.334  Sum_probs=104.8

Q ss_pred             hcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCCc---ccHHHHHHHHHh------ccccceecchHH--H----
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASG---QGLEEFKNEIET------SNSNATIGANVK--A----  467 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~---~~~~~~~~e~~~------~~~~~~~~~~~~--~----  467 (626)
                      .++|++.+.||+|+||.||+|+. .+++.||||++.....   .....+.+|+..      +|++++++....  .    
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~   90 (311)
T 3ork_A           11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL   90 (311)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred             cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence            46799999999999999999997 5689999999975432   334567788764      677777654332  1    


Q ss_pred             HHHhhccccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcch
Q 006915          468 FVREMKTFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLAL  538 (626)
Q Consensus       468 ~~~~~~~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~  538 (626)
                      ++.+++++.++++..      .+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||++.
T Consensus        91 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~a~  164 (311)
T 3ork_A           91 PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIAR  164 (311)
T ss_dssp             EEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEETTSCEEECCCSCC-
T ss_pred             cEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEcCCCCEEEeeccCcc
Confidence            134556665555533      4788999999999999999999998   9999999999999999999999999983

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.84  E-value=1.3e-21  Score=205.88  Aligned_cols=131  Identities=15%  Similarity=0.174  Sum_probs=98.2

Q ss_pred             hcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCC---CcccHHHHHHHHHhccccc-eecchHHHHH---------
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSA---SGQGLEEFKNEIETSNSNA-TIGANVKAFV---------  469 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~---~~~~~~~~~~e~~~~~~~~-~~~~~~~~~~---------  469 (626)
                      .++|.+.+.||+|+||.||+|+. .+++.||||++...   .....+.+.+|+.....+. +.+.++..++         
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~  151 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL  151 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred             CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence            46789999999999999999997 46999999999742   3345678889985433222 2233333222         


Q ss_pred             -------------------------HhhccccCCCcccCCC-------------HHHHHHHHHHHHHHHHHHHhCCCCce
Q 006915          470 -------------------------REMKTFSDPTLSALLH-------------WEMRFNIIIGIARGLLYLHQDSRLRI  511 (626)
Q Consensus       470 -------------------------~~~~~~~~~~l~~~l~-------------~~~~~~i~~~ia~gL~yLH~~~~~~i  511 (626)
                                               .++++. ++++..++.             +..++.|+.||+.||+|||+.+   |
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---i  227 (377)
T 3byv_A          152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---L  227 (377)
T ss_dssp             EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT---E
T ss_pred             hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC---e
Confidence                                     122333 345443322             4777889999999999999998   9


Q ss_pred             EecCCCCCCeEECCCCcEEEEecCcch
Q 006915          512 IHRDLKTSNILLDQEMNPKISDFGLAL  538 (626)
Q Consensus       512 vHrDlkp~NILl~~~~~~kl~DFGla~  538 (626)
                      +||||||+|||++.++.+||+|||++.
T Consensus       228 vHrDikp~NIll~~~~~~kL~DFG~a~  254 (377)
T 3byv_A          228 VHTYLRPVDIVLDQRGGVFLTGFEHLV  254 (377)
T ss_dssp             ECSCCCGGGEEECTTCCEEECCGGGCE
T ss_pred             ecCCCCHHHEEEcCCCCEEEEechhhe
Confidence            999999999999999999999999983

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.84  E-value=1.2e-21  Score=198.41  Aligned_cols=130  Identities=24%  Similarity=0.352  Sum_probs=100.6

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC--cccHHHHHHHHHh------ccccceecchHH--HHHHhhc
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS--GQGLEEFKNEIET------SNSNATIGANVK--AFVREMK  473 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~  473 (626)
                      ++|++.+.||+|+||.||+|+.. +++.||||++....  ......+.+|+..      +|++++.+....  .++.+++
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   81 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence            57899999999999999999885 58999999997533  2234566677654      667776654322  1223334


Q ss_pred             cccCCCc------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          474 TFSDPTL------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       474 ~~~~~~l------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++.+..+      ...+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus        82 ~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~---ivH~dikp~Nil~~~~~~~kl~Dfg~~  148 (292)
T 3o0g_A           82 FCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLA  148 (292)
T ss_dssp             CCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred             cCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccc
Confidence            3332111      235789999999999999999999998   999999999999999999999999998

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.84  E-value=1.6e-21  Score=197.29  Aligned_cols=129  Identities=28%  Similarity=0.428  Sum_probs=100.5

Q ss_pred             cCccccccccccCeEEEEEEEcCCCcEEEEEEecCCC--cccHHHHHHHHHh------ccccceecchHH--HHHHhhcc
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSAS--GQGLEEFKNEIET------SNSNATIGANVK--AFVREMKT  474 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~--~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~  474 (626)
                      ++|.+.+.||+|+||.||+|+..+++.||||++....  ......+.+|++.      +|++++++....  .++.++++
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence            5788999999999999999999779999999997532  2234667777764      666666654322  12222333


Q ss_pred             ccCCCc-------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          475 FSDPTL-------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       475 ~~~~~l-------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +.+ ++       ...+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus        82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~  147 (288)
T 1ob3_A           82 LDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLA  147 (288)
T ss_dssp             CSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCTTHH
T ss_pred             cCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEeECccc
Confidence            322 21       134788899999999999999999998   999999999999999999999999987

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.84  E-value=1.1e-21  Score=204.96  Aligned_cols=130  Identities=25%  Similarity=0.277  Sum_probs=103.4

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCcccHHHHHHHHH------hccccceecchHH--HHHHhhcc
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQGLEEFKNEIE------TSNSNATIGANVK--AFVREMKT  474 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~~~  474 (626)
                      .++|.+.+.||+|+||.||+++.. +++.||||++..... ..+.+.+|+.      ++|++++.+....  .++.++++
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~   97 (361)
T 3uc3_A           19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY   97 (361)
T ss_dssp             TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence            467999999999999999999985 689999999975432 2244555544      4778877765432  33345666


Q ss_pred             ccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCc--EEEEecCcc
Q 006915          475 FSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMN--PKISDFGLA  537 (626)
Q Consensus       475 ~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~--~kl~DFGla  537 (626)
                      +.++++..      .+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.  +||+|||++
T Consensus        98 ~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~---ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a  165 (361)
T 3uc3_A           98 ASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQ---ICHRDLKLENTLLDGSPAPRLKICDFGYS  165 (361)
T ss_dssp             CCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---CCSCCCCGGGEEECSSSSCCEEECCCCCC
T ss_pred             CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCceEEEeecCcc
Confidence            66666543      4788999999999999999999998   999999999999987765  999999987

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.84  E-value=7.4e-22  Score=198.82  Aligned_cols=180  Identities=23%  Similarity=0.285  Sum_probs=131.8

Q ss_pred             hhcCccccccccccCeEEEEEEEcCC----CcEEEEEEecCCC-cccHHHHHHHHH------hccccceecchHH-HHHH
Q 006915          403 ATDNFSEANKLGKGGFGPVYKAKFPG----GQQIAVKRLSSAS-GQGLEEFKNEIE------TSNSNATIGANVK-AFVR  470 (626)
Q Consensus       403 ~~~~f~~~~~lG~G~fG~Vy~~~~~~----~~~vAvK~l~~~~-~~~~~~~~~e~~------~~~~~~~~~~~~~-~~~~  470 (626)
                      ..++|.+.+.||+|+||.||+|+...    +..||||.+.... ....+.+.+|+.      +++++++++.... ..+.
T Consensus        10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   89 (281)
T 3cc6_A           10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWI   89 (281)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSSSCEE
T ss_pred             cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCEE
Confidence            34678899999999999999998632    3469999998642 234455666654      4777777765332 2223


Q ss_pred             hhccccCCCccc-------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhc---
Q 006915          471 EMKTFSDPTLSA-------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM---  540 (626)
Q Consensus       471 ~~~~~~~~~l~~-------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~---  540 (626)
                      .++++.++++..       .+++..+..++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||++...   
T Consensus        90 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  166 (281)
T 3cc6_A           90 IMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESIN---CVHRDIAVRNILVASPECVKLGDFGLSRYIEDE  166 (281)
T ss_dssp             EEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEEETTEEEECCCCGGGCC---
T ss_pred             EEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEECCCCcEEeCccCCCcccccc
Confidence            455555555532       3778889999999999999999998   999999999999999999999999987211   


Q ss_pred             -----------------------------------------cc-cccCC------------------CCChHHHHHHHHH
Q 006915          541 -----------------------------------------MD-QKLHA------------------SSKPNEILKCINV  560 (626)
Q Consensus       541 -----------------------------------------~~-~~~~~------------------~~~~~~~~~~~~~  560 (626)
                                                               +. .....                  ..+......+..+
T Consensus       167 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  246 (281)
T 3cc6_A          167 DYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVLYTL  246 (281)
T ss_dssp             ------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTCCCCCCTTCCHHHHHH
T ss_pred             cccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCCCCCCCCCCCHHHHHH
Confidence                                                     11 00000                  0011122356788


Q ss_pred             HHHhcccCCCCCCCHHHHHHHhccc
Q 006915          561 GLLCVQEDPNDRPTMSDVVIMLGSE  585 (626)
Q Consensus       561 ~~~C~~~~p~~RPs~~~vl~~L~~~  585 (626)
                      +..|++.+|.+||++.+++..|+.+
T Consensus       247 i~~~l~~~p~~Rps~~ell~~L~~~  271 (281)
T 3cc6_A          247 MTRCWDYDPSDRPRFTELVCSLSDV  271 (281)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHccCCchhCcCHHHHHHHHHHH
Confidence            8899999999999999999999875

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.84  E-value=1.8e-21  Score=201.30  Aligned_cols=132  Identities=27%  Similarity=0.290  Sum_probs=104.8

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCC---CcccHHHHHHHHHh------ccccceecchHH--HHHHh
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSA---SGQGLEEFKNEIET------SNSNATIGANVK--AFVRE  471 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~---~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~  471 (626)
                      .++|++.+.||+|+||.||+++.. +++.||||.+++.   .......+.+|+..      ++++++.+....  .++.+
T Consensus         4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   83 (337)
T 1o6l_A            4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV   83 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence            357899999999999999999885 5899999999753   22345556666553      666666554332  33455


Q ss_pred             hccccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcch
Q 006915          472 MKTFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLAL  538 (626)
Q Consensus       472 ~~~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~  538 (626)
                      ++++.++++.      ..+++.....++.||+.||+|||+++   |+||||||+|||++.++.+||+|||++.
T Consensus        84 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~  153 (337)
T 1o6l_A           84 MEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK  153 (337)
T ss_dssp             EECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred             EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCCHHHEEECCCCCEEEeeccchh
Confidence            6777776663      34778889999999999999999998   9999999999999999999999999983

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.84  E-value=2e-21  Score=204.70  Aligned_cols=131  Identities=27%  Similarity=0.312  Sum_probs=105.0

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH--HHHHhhcc
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK--AFVREMKT  474 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~  474 (626)
                      .+.|.+.+.||+|+||.||+|... +++.||+|.+..........+.+|+..      +|++++.+....  .++.++++
T Consensus        50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~  129 (387)
T 1kob_A           50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF  129 (387)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence            467999999999999999999875 589999999986554455667777764      677777665432  23345666


Q ss_pred             ccCCCccc-------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECC--CCcEEEEecCcc
Q 006915          475 FSDPTLSA-------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQ--EMNPKISDFGLA  537 (626)
Q Consensus       475 ~~~~~l~~-------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~--~~~~kl~DFGla  537 (626)
                      +.++++..       .+++..+..++.||+.||+|||+.+   |+||||||+|||++.  ++.+||+|||++
T Consensus       130 ~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~vkL~DFG~a  198 (387)
T 1kob_A          130 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLA  198 (387)
T ss_dssp             CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSTTCCCEEECCCTTC
T ss_pred             CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccchHHeEEecCCCCceEEEecccc
Confidence            66665532       3678899999999999999999998   999999999999974  577999999998

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.84  E-value=8.6e-22  Score=203.50  Aligned_cols=130  Identities=27%  Similarity=0.347  Sum_probs=101.6

Q ss_pred             hcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCC---CcccHHHHHHHHHh------ccccceecchHH--HHHHh
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSA---SGQGLEEFKNEIET------SNSNATIGANVK--AFVRE  471 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~---~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~  471 (626)
                      .++|.+.+.||+|+||.||+|+. .+++.||||.+...   .......+.+|+..      +|++++.+....  .++.+
T Consensus         8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv   87 (336)
T 3h4j_B            8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV   87 (336)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence            46799999999999999999997 56899999998642   12234566677654      677777654332  22233


Q ss_pred             hccccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          472 MKTFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       472 ~~~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +++. ++++.      ..+++..+..++.||+.||.|||+.+   |+||||||+|||+++++.+||+|||++
T Consensus        88 ~E~~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~DFG~s  155 (336)
T 3h4j_B           88 IEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLS  155 (336)
T ss_dssp             ECCC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCSTTTEEECTTCCEEECCSSCT
T ss_pred             EECC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCchhhEEEcCCCCEEEEEeccc
Confidence            4444 33332      34788999999999999999999998   999999999999999999999999988

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.84  E-value=7.1e-22  Score=204.09  Aligned_cols=133  Identities=28%  Similarity=0.346  Sum_probs=101.8

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCcccHHHHHHHHH-------hccccceecchHH---------
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQGLEEFKNEIE-------TSNSNATIGANVK---------  466 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~e~~-------~~~~~~~~~~~~~---------  466 (626)
                      ..+|.+.+.||+|+||.||+|+.. +++.||||++..........+.+|+.       ++|++++++....         
T Consensus        27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~  106 (337)
T 3ll6_A           27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ  106 (337)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred             CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence            457899999999999999999974 68999999987655444555655543       5778877655421         


Q ss_pred             -HHHHhhccccCCCc---------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCc
Q 006915          467 -AFVREMKTFSDPTL---------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGL  536 (626)
Q Consensus       467 -~~~~~~~~~~~~~l---------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl  536 (626)
                       .++..+++.. +++         ...+++..++.++.||+.||.|||+.+ ++|+||||||+|||++.++.+||+|||+
T Consensus       107 ~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-~~ivH~Dikp~NIl~~~~~~~kl~Dfg~  184 (337)
T 3ll6_A          107 AEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQK-PPIIHRDLKVENLLLSNQGTIKLCDFGS  184 (337)
T ss_dssp             EEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCCCCCGGGCEECTTSCEEBCCCTT
T ss_pred             ceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCC-CCEEEccCCcccEEECCCCCEEEecCcc
Confidence             1122233322 222         224789999999999999999999874 4599999999999999999999999999


Q ss_pred             ch
Q 006915          537 AL  538 (626)
Q Consensus       537 a~  538 (626)
                      +.
T Consensus       185 ~~  186 (337)
T 3ll6_A          185 AT  186 (337)
T ss_dssp             CB
T ss_pred             ce
Confidence            84

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.84  E-value=1.9e-21  Score=200.41  Aligned_cols=139  Identities=26%  Similarity=0.344  Sum_probs=105.2

Q ss_pred             CHHHHHHhhcCcccc-ccccccCeEEEEEEEcC-CCcEEEEEEecCC--CcccHHHHHHHHHh-------ccccceecch
Q 006915          396 DFESILAATDNFSEA-NKLGKGGFGPVYKAKFP-GGQQIAVKRLSSA--SGQGLEEFKNEIET-------SNSNATIGAN  464 (626)
Q Consensus       396 ~~~~l~~~~~~f~~~-~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~--~~~~~~~~~~e~~~-------~~~~~~~~~~  464 (626)
                      .+.......+.|.+. +.||+|+||.||+|+.. +++.||||++...  ......++.+|+..       ++++.+.+..
T Consensus        19 ~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~   98 (327)
T 3lm5_A           19 YFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVY   98 (327)
T ss_dssp             CSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEE
T ss_pred             HHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEE
Confidence            334444555667776 88999999999999875 5899999999753  23345667777643       5666666543


Q ss_pred             HH--HHHHhhccccCCCc--------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECC---CCcEEE
Q 006915          465 VK--AFVREMKTFSDPTL--------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQ---EMNPKI  531 (626)
Q Consensus       465 ~~--~~~~~~~~~~~~~l--------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~---~~~~kl  531 (626)
                      ..  .++.+++++.++++        ...+++..+..++.||+.||+|||+.+   |+||||||+|||++.   ++.+||
T Consensus        99 ~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~g---ivH~Dikp~NIl~~~~~~~~~~kL  175 (327)
T 3lm5_A           99 ENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNN---IVHLDLKPQNILLSSIYPLGDIKI  175 (327)
T ss_dssp             ECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESCBTTBCCEEE
T ss_pred             EeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCChHHEEEecCCCCCcEEE
Confidence            22  22344555554443        244788999999999999999999998   999999999999988   789999


Q ss_pred             EecCcc
Q 006915          532 SDFGLA  537 (626)
Q Consensus       532 ~DFGla  537 (626)
                      +|||++
T Consensus       176 ~Dfg~a  181 (327)
T 3lm5_A          176 VDFGMS  181 (327)
T ss_dssp             CCGGGC
T ss_pred             eeCccc
Confidence            999998

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.84  E-value=1.8e-21  Score=200.00  Aligned_cols=130  Identities=22%  Similarity=0.239  Sum_probs=103.4

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCcccHHHHHHHHH------hccccceecchHH--HHHHhhcc
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQGLEEFKNEIE------TSNSNATIGANVK--AFVREMKT  474 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~~~  474 (626)
                      .++|.+.+.||+|+||.||+|+.. +++.||+|.+.... .....+.+|+.      ++|++++.+....  .++.++++
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~   82 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF   82 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence            468999999999999999999885 58899999997543 33445666655      4777777765432  23345566


Q ss_pred             ccCCCcc-------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECC--CCcEEEEecCcc
Q 006915          475 FSDPTLS-------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQ--EMNPKISDFGLA  537 (626)
Q Consensus       475 ~~~~~l~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~--~~~~kl~DFGla  537 (626)
                      +.++++.       ..+++..+..++.||+.||.|||+.+   |+||||||+|||++.  ++.+||+|||++
T Consensus        83 ~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~g---ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a  151 (321)
T 1tki_A           83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHN---IGHFDIRPENIIYQTRRSSTIKIIEFGQA  151 (321)
T ss_dssp             CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCTTC
T ss_pred             CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEccCCCCCEEEEECCCC
Confidence            6655542       24788999999999999999999998   999999999999987  789999999998

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.84  E-value=1.1e-21  Score=202.23  Aligned_cols=130  Identities=28%  Similarity=0.341  Sum_probs=103.2

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCc------ccHHHHHHHHHh------ccccceecchHH--HHH
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASG------QGLEEFKNEIET------SNSNATIGANVK--AFV  469 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~------~~~~~~~~e~~~------~~~~~~~~~~~~--~~~  469 (626)
                      +.|.+.+.||+|+||.||+|+.. +++.||||.+.....      ...+.+.+|+..      +|++.+.+....  .++
T Consensus        11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~   90 (326)
T 2y0a_A           11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI   90 (326)
T ss_dssp             HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            46889999999999999999885 589999999975321      235667777654      777777664432  233


Q ss_pred             HhhccccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCC----cEEEEecCcc
Q 006915          470 REMKTFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEM----NPKISDFGLA  537 (626)
Q Consensus       470 ~~~~~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~----~~kl~DFGla  537 (626)
                      .+++++.++++..      .+++..+..++.||+.||.|||+.+   |+||||||+|||++.++    .+||+|||++
T Consensus        91 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a  165 (326)
T 2y0a_A           91 LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA  165 (326)
T ss_dssp             EEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCSSSSSCCEEECCCTTC
T ss_pred             EEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHCC---eEcCCCCHHHEEEecCCCCCCCEEEEECCCC
Confidence            4556666655533      3678999999999999999999998   99999999999999887    7999999998

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.84  E-value=1.7e-21  Score=203.33  Aligned_cols=131  Identities=30%  Similarity=0.334  Sum_probs=104.7

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCc------ccHHHHHHHHHh------ccccceecchHH--HH
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASG------QGLEEFKNEIET------SNSNATIGANVK--AF  468 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~------~~~~~~~~e~~~------~~~~~~~~~~~~--~~  468 (626)
                      .+.|.+.+.||+|+||.||+|+.. +++.||||.++....      ...+.+.+|+..      +|++++.+....  .+
T Consensus        11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~   90 (361)
T 2yab_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV   90 (361)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence            457999999999999999999885 589999999975432      135677777764      667777654332  23


Q ss_pred             HHhhccccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCC----cEEEEecCcc
Q 006915          469 VREMKTFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEM----NPKISDFGLA  537 (626)
Q Consensus       469 ~~~~~~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~----~~kl~DFGla  537 (626)
                      +.+++++.++++..      .+++..+..++.||+.||.|||+.+   |+||||||+|||++.++    .+||+|||++
T Consensus        91 ~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~~~vkl~DFG~a  166 (361)
T 2yab_A           91 VLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLA  166 (361)
T ss_dssp             EEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECCCSSC
T ss_pred             EEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEeCCCCCccCEEEEecCCc
Confidence            34566666666533      4778999999999999999999998   99999999999998877    7999999998

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.84  E-value=1e-21  Score=204.27  Aligned_cols=129  Identities=29%  Similarity=0.425  Sum_probs=100.7

Q ss_pred             cCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCCc---ccHHHHHHHHHh------ccccceecchHH--HHHHhh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASG---QGLEEFKNEIET------SNSNATIGANVK--AFVREM  472 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~---~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~  472 (626)
                      +.|...+.||+|+||.||+|+. .+++.||||++.....   ...+.+.+|++.      +|++++.+.+..  .++.++
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  133 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM  133 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence            4588899999999999999986 5689999999975322   233456667654      778877765432  222334


Q ss_pred             ccccCCCc-------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          473 KTFSDPTL-------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       473 ~~~~~~~l-------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +++.+ ++       ...+++..+..++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus       134 e~~~g-~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a  201 (348)
T 1u5q_A          134 EYCLG-SASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSA  201 (348)
T ss_dssp             ECCSE-EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTEEEECCCTTC
T ss_pred             ecCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEeeccCc
Confidence            44432 21       235789999999999999999999998   999999999999999999999999998

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.84  E-value=1.7e-21  Score=202.79  Aligned_cols=132  Identities=30%  Similarity=0.348  Sum_probs=103.6

Q ss_pred             hhcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCC---CcccHHHHHHHHH-------hccccceecchHH--HHH
Q 006915          403 ATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSA---SGQGLEEFKNEIE-------TSNSNATIGANVK--AFV  469 (626)
Q Consensus       403 ~~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~---~~~~~~~~~~e~~-------~~~~~~~~~~~~~--~~~  469 (626)
                      ..++|++.+.||+|+||.||+|+.. +++.||||++++.   .....+.+.+|..       +++++++.+....  .++
T Consensus        21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~  100 (353)
T 3txo_A           21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF  100 (353)
T ss_dssp             --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred             chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence            3468999999999999999999875 5899999999753   1223344444433       4677777654332  334


Q ss_pred             HhhccccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          470 REMKTFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       470 ~~~~~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      .+++++.++++.      ..+++..+..++.||+.||+|||+.+   |+||||||+||||+.++.+||+|||++
T Consensus       101 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NILl~~~g~ikL~DFG~a  171 (353)
T 3txo_A          101 FVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMC  171 (353)
T ss_dssp             EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred             EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---CcccCCCHHHEEECCCCCEEEccccce
Confidence            566777776664      34788899999999999999999998   999999999999999999999999998

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.84  E-value=1.6e-21  Score=202.53  Aligned_cols=136  Identities=25%  Similarity=0.331  Sum_probs=104.4

Q ss_pred             HHHhhcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCC-----CcccHHHHHHHHHh------ccccceecchHH-
Q 006915          400 ILAATDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSA-----SGQGLEEFKNEIET------SNSNATIGANVK-  466 (626)
Q Consensus       400 l~~~~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~-----~~~~~~~~~~e~~~------~~~~~~~~~~~~-  466 (626)
                      +....++|.+.+.||+|+||.||+|+. .+++.||||++...     .....+.+.+|++.      +|++++++.+.. 
T Consensus        21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~  100 (345)
T 3hko_A           21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE  100 (345)
T ss_dssp             HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence            445567899999999999999999987 45889999998643     23445667777654      778877765433 


Q ss_pred             -HHHHhhccccCCCcccCC----------------------------------------------CHHHHHHHHHHHHHH
Q 006915          467 -AFVREMKTFSDPTLSALL----------------------------------------------HWEMRFNIIIGIARG  499 (626)
Q Consensus       467 -~~~~~~~~~~~~~l~~~l----------------------------------------------~~~~~~~i~~~ia~g  499 (626)
                       .++.+++++.++++...+                                              ++.....++.||+.|
T Consensus       101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~  180 (345)
T 3hko_A          101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA  180 (345)
T ss_dssp             SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred             CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence             233455666665554433                                              356677899999999


Q ss_pred             HHHHHhCCCCceEecCCCCCCeEECCCC--cEEEEecCcch
Q 006915          500 LLYLHQDSRLRIIHRDLKTSNILLDQEM--NPKISDFGLAL  538 (626)
Q Consensus       500 L~yLH~~~~~~ivHrDlkp~NILl~~~~--~~kl~DFGla~  538 (626)
                      |+|||+.+   |+||||||+|||++.++  .+||+|||++.
T Consensus       181 l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~  218 (345)
T 3hko_A          181 LHYLHNQG---ICHRDIKPENFLFSTNKSFEIKLVDFGLSK  218 (345)
T ss_dssp             HHHHHHTT---EECCCCCGGGEEESCSSSCCEEECCCTTCE
T ss_pred             HHHHHHCC---ccccCCChhhEEEecCCCceEEEeeccccc
Confidence            99999998   99999999999998776  89999999983

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.84  E-value=2.3e-21  Score=195.04  Aligned_cols=132  Identities=29%  Similarity=0.355  Sum_probs=102.3

Q ss_pred             hhcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHHHHh------ccccceecchHH--HHHH
Q 006915          403 ATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNEIET------SNSNATIGANVK--AFVR  470 (626)
Q Consensus       403 ~~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~  470 (626)
                      +.++|.+.+.||+|+||.||+|+.. +++.||||++....   ......+.+|+..      ++++.+.+.+..  .++.
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   86 (279)
T 3fdn_A            7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL   86 (279)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence            3567999999999999999999875 57899999986421   2234556667654      667776664432  2233


Q ss_pred             hhccccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          471 EMKTFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       471 ~~~~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      .+++..++++.      ..+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus        87 v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~Dfg~~  156 (279)
T 3fdn_A           87 ILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS  156 (279)
T ss_dssp             EECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTT---CEECCCCGGGEEECTTSCEEECSCCEE
T ss_pred             EEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHhEEEcCCCCEEEEecccc
Confidence            44555544443      34778899999999999999999987   999999999999999999999999987

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.84  E-value=4e-21  Score=199.10  Aligned_cols=129  Identities=30%  Similarity=0.410  Sum_probs=101.7

Q ss_pred             HhhcCccccccccccCeEEEEEEEcCCCcEEEEEEecCCCcccHHHHHHHH--------HhccccceecchHH------H
Q 006915          402 AATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEI--------ETSNSNATIGANVK------A  467 (626)
Q Consensus       402 ~~~~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~e~--------~~~~~~~~~~~~~~------~  467 (626)
                      ...++|.+.+.||+|+||.||+|+. +++.||||.+....   ...+.+|.        .++|++++++....      .
T Consensus        39 ~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~  114 (342)
T 1b6c_B           39 TIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ  114 (342)
T ss_dssp             HHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCC
T ss_pred             cccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCchh---HHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccce
Confidence            3456899999999999999999998 58999999997532   33444443        34677777665432      2


Q ss_pred             HHHhhccccCCCccc-----CCCHHHHHHHHHHHHHHHHHHH--------hCCCCceEecCCCCCCeEECCCCcEEEEec
Q 006915          468 FVREMKTFSDPTLSA-----LLHWEMRFNIIIGIARGLLYLH--------QDSRLRIIHRDLKTSNILLDQEMNPKISDF  534 (626)
Q Consensus       468 ~~~~~~~~~~~~l~~-----~l~~~~~~~i~~~ia~gL~yLH--------~~~~~~ivHrDlkp~NILl~~~~~~kl~DF  534 (626)
                      ++.+++++.++++..     .+++..++.++.|++.||.|||        +.+   |+||||||+|||++.++.+||+||
T Consensus       115 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~NIll~~~~~~kL~Df  191 (342)
T 1b6c_B          115 LWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVKKNGTCCIADL  191 (342)
T ss_dssp             EEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE---EECSCCSGGGEEECTTSCEEECCC
T ss_pred             eEEEEeecCCCcHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC---eeeCCCCHHHEEECCCCCEEEEEC
Confidence            334566666666644     3678999999999999999999        666   999999999999999999999999


Q ss_pred             Ccc
Q 006915          535 GLA  537 (626)
Q Consensus       535 Gla  537 (626)
                      |++
T Consensus       192 g~~  194 (342)
T 1b6c_B          192 GLA  194 (342)
T ss_dssp             TTC
T ss_pred             CCc
Confidence            987

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.84  E-value=5.4e-21  Score=195.40  Aligned_cols=130  Identities=22%  Similarity=0.337  Sum_probs=101.1

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCc--ccHHHHHHHHH------hccccceecchHH--HHHHhhc
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASG--QGLEEFKNEIE------TSNSNATIGANVK--AFVREMK  473 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~--~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~~  473 (626)
                      ++|++.+.||+|+||.||+|+.. +++.||||++.....  ...+.+.+|++      +++++++++....  .++.+++
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE   82 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence            57899999999999999999985 489999999865432  22345556654      3777777765432  1223344


Q ss_pred             cccCCCc------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          474 TFSDPTL------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       474 ~~~~~~l------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++.++.+      ...+++..+..++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus        83 ~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~  149 (311)
T 4agu_A           83 YCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHN---CIHRDVKPENILITKHSVIKLCDFGFA  149 (311)
T ss_dssp             CCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred             eCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCChhhEEEcCCCCEEEeeCCCc
Confidence            4444332      234788999999999999999999998   999999999999999999999999998

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.84  E-value=3.4e-21  Score=207.96  Aligned_cols=131  Identities=26%  Similarity=0.328  Sum_probs=101.9

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCC--CcccHHHHHHHHH------hccccceecchHH--------
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSA--SGQGLEEFKNEIE------TSNSNATIGANVK--------  466 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~--~~~~~~~~~~e~~------~~~~~~~~~~~~~--------  466 (626)
                      .++|++.+.||+|+||.||+|+.. +++.||||++...  .....+.+.+|+.      ++|++++++....        
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  140 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ  140 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred             cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence            468999999999999999999874 5899999999753  2233455666665      4777777664321        


Q ss_pred             HHHHhhccccCCC---cccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          467 AFVREMKTFSDPT---LSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       467 ~~~~~~~~~~~~~---l~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      .++.+++++.++.   +...+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+|
T Consensus       141 ~~~lv~E~~~~~l~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~---iiHrDlkp~NIll~~~~~~kl~DFG~a  211 (464)
T 3ttj_A          141 DVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA  211 (464)
T ss_dssp             EEEEEEECCSEEHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCCC
T ss_pred             eEEEEEeCCCCCHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChHhEEEeCCCCEEEEEEEee
Confidence            1233444443321   1234788999999999999999999998   999999999999999999999999998

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.84  E-value=3.1e-21  Score=194.78  Aligned_cols=130  Identities=28%  Similarity=0.376  Sum_probs=102.7

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC-cccHHHHHHHHHh------ccccceecchHH--HHHHhhcc
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS-GQGLEEFKNEIET------SNSNATIGANVK--AFVREMKT  474 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~  474 (626)
                      ++|.+.+.||+|+||.||+++.. +++.||||++.... ....+.+.+|++.      ++++++++....  .++.++++
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~  101 (285)
T 3is5_A           22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET  101 (285)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence            46888999999999999999874 58999999997543 3345667777654      677777665432  22344566


Q ss_pred             ccCCCcc----------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEE---CCCCcEEEEecCcc
Q 006915          475 FSDPTLS----------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILL---DQEMNPKISDFGLA  537 (626)
Q Consensus       475 ~~~~~l~----------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl---~~~~~~kl~DFGla  537 (626)
                      +.++++.          ..+++..+..++.||+.||+|||+.+   |+||||||+|||+   +.++.+||+|||++
T Consensus       102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a  174 (285)
T 3is5_A          102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH---VVHKDLKPENILFQDTSPHSPIKIIDFGLA  174 (285)
T ss_dssp             CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEESSSSTTCCEEECCCCCC
T ss_pred             CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCCCHHHEEEecCCCCCCEEEEeeecc
Confidence            6555543          34788899999999999999999998   9999999999999   45688999999998

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.83  E-value=1.5e-21  Score=204.98  Aligned_cols=130  Identities=12%  Similarity=0.134  Sum_probs=90.4

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCc---ccHHHHHHHHH--------hccccceecchH------
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASG---QGLEEFKNEIE--------TSNSNATIGANV------  465 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~e~~--------~~~~~~~~~~~~------  465 (626)
                      ...|.+.+.||+|+||.||+|+.. +++.||||++.....   ...+.+.+|+.        +++++..+....      
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~  140 (371)
T 3q60_A           61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV  140 (371)
T ss_dssp             EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred             ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence            345888999999999999999974 689999999986432   23344555532        445443221110      


Q ss_pred             --------------------HHHHHhhccccCCCcccC-------CCHHHH------HHHHHHHHHHHHHHHhCCCCceE
Q 006915          466 --------------------KAFVREMKTFSDPTLSAL-------LHWEMR------FNIIIGIARGLLYLHQDSRLRII  512 (626)
Q Consensus       466 --------------------~~~~~~~~~~~~~~l~~~-------l~~~~~------~~i~~~ia~gL~yLH~~~~~~iv  512 (626)
                                          ..++.+++++. +++..+       +.+..+      +.++.||+.||+|||+++   |+
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~---iv  216 (371)
T 3q60_A          141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKG---LV  216 (371)
T ss_dssp             EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT---EE
T ss_pred             ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCC---Cc
Confidence                                11233445444 454433       344455      678899999999999998   99


Q ss_pred             ecCCCCCCeEECCCCcEEEEecCcc
Q 006915          513 HRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       513 HrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ||||||+|||++.++.+||+|||+|
T Consensus       217 HrDikp~NIll~~~~~~kL~DFG~a  241 (371)
T 3q60_A          217 HGHFTPDNLFIMPDGRLMLGDVSAL  241 (371)
T ss_dssp             ETTCSGGGEEECTTSCEEECCGGGE
T ss_pred             cCcCCHHHEEECCCCCEEEEeccee
Confidence            9999999999999999999999998

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.83  E-value=1.9e-21  Score=200.49  Aligned_cols=182  Identities=26%  Similarity=0.412  Sum_probs=129.9

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcE--EEEEEecCC-CcccHHHHHHHHHh-------ccccceecchHH--HHHHh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQ--IAVKRLSSA-SGQGLEEFKNEIET-------SNSNATIGANVK--AFVRE  471 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~--vAvK~l~~~-~~~~~~~~~~e~~~-------~~~~~~~~~~~~--~~~~~  471 (626)
                      ++|.+.+.||+|+||.||+|+.. ++..  ||||.+... .....+.+.+|++.       ++++++++....  .++.+
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv  104 (327)
T 1fvr_A           25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA  104 (327)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence            57888999999999999999874 4554  599998753 23344556667643       566666654322  22233


Q ss_pred             hccccCCCcc----------------------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcE
Q 006915          472 MKTFSDPTLS----------------------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNP  529 (626)
Q Consensus       472 ~~~~~~~~l~----------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~  529 (626)
                      ++++.++++.                      ..+++..++.++.||+.||.|||+.+   |+||||||+|||++.++.+
T Consensus       105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~  181 (327)
T 1fvr_A          105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVA  181 (327)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCE
T ss_pred             EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCccceEEEcCCCeE
Confidence            4444444432                      25788999999999999999999998   9999999999999999999


Q ss_pred             EEEecCcch------------------------------------------hccc-cccC------------------CC
Q 006915          530 KISDFGLAL------------------------------------------DMMD-QKLH------------------AS  548 (626)
Q Consensus       530 kl~DFGla~------------------------------------------~~~~-~~~~------------------~~  548 (626)
                      ||+|||++.                                          +++. ....                  ..
T Consensus       182 kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~  261 (327)
T 1fvr_A          182 KIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLE  261 (327)
T ss_dssp             EECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCCCC
T ss_pred             EEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcCCCCC
Confidence            999999871                                          1111 1000                  01


Q ss_pred             CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccccC
Q 006915          549 SKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNL  589 (626)
Q Consensus       549 ~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~~~~  589 (626)
                      .+......+.+++..|++.+|.+||++.+++..|..+..+.
T Consensus       262 ~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~  302 (327)
T 1fvr_A          262 KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER  302 (327)
T ss_dssp             CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred             CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhh
Confidence            11122345778888999999999999999999998876543

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.83  E-value=3.6e-21  Score=202.90  Aligned_cols=131  Identities=21%  Similarity=0.278  Sum_probs=103.1

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHHH-------HhccccceecchHH--HHHH
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNEI-------ETSNSNATIGANVK--AFVR  470 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e~-------~~~~~~~~~~~~~~--~~~~  470 (626)
                      .++|++.+.||+|+||.||+|+.. +++.||||++++..   ......+.+|.       .+++++++.+....  .++.
T Consensus        51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l  130 (396)
T 4dc2_A           51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF  130 (396)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence            457999999999999999999985 58899999997532   11222233332       45788887765432  3445


Q ss_pred             hhccccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          471 EMKTFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       471 ~~~~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +++++.++++.      ..+++..+..++.||+.||+|||+.+   |+||||||+||||+.++.+||+|||++
T Consensus       131 V~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFGla  200 (396)
T 4dc2_A          131 VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMC  200 (396)
T ss_dssp             EEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred             EEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEECCCCCEEEeeccee
Confidence            66777776663      35788999999999999999999998   999999999999999999999999998

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.83  E-value=3e-21  Score=193.84  Aligned_cols=131  Identities=24%  Similarity=0.326  Sum_probs=106.1

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH--HHHHhhcc
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK--AFVREMKT  474 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~  474 (626)
                      .++|.+.+.||+|+||.||+|+.. ++..||+|++........+.+.+|++.      ++++++.+.+..  .++.++++
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   87 (277)
T 3f3z_A            8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL   87 (277)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence            456899999999999999999885 478999999987655666777777764      667776664432  22344566


Q ss_pred             ccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEE---CCCCcEEEEecCcc
Q 006915          475 FSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILL---DQEMNPKISDFGLA  537 (626)
Q Consensus       475 ~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl---~~~~~~kl~DFGla  537 (626)
                      +.++++.      ..+++..+..++.|++.||.|||+.+   |+||||||+|||+   +.++.+||+|||++
T Consensus        88 ~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~  156 (277)
T 3f3z_A           88 CTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLA  156 (277)
T ss_dssp             CCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred             cCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEecCCCCCcEEEEecccc
Confidence            6665553      34788999999999999999999998   9999999999999   78899999999988

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.83  E-value=6e-21  Score=192.34  Aligned_cols=131  Identities=24%  Similarity=0.375  Sum_probs=101.9

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC--cccHHHHHHHHH------hccccceecchHH--HHHHhh
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS--GQGLEEFKNEIE------TSNSNATIGANVK--AFVREM  472 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~  472 (626)
                      .++|++.+.||+|+||.||+|... +++.||||++....  ....+.+.+|+.      +++++++.+....  ..+..+
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   84 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF   84 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence            468999999999999999999874 58999999997432  233455666654      3777777665432  222345


Q ss_pred             ccccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCc---EEEEecCcc
Q 006915          473 KTFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMN---PKISDFGLA  537 (626)
Q Consensus       473 ~~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~---~kl~DFGla  537 (626)
                      +++.++++.      ..+++..+..++.|++.||.|||+.+   |+||||||+|||++.++.   +||+|||++
T Consensus        85 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~  155 (284)
T 3kk8_A           85 DLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA  155 (284)
T ss_dssp             CCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSTTCCEEECCCTTC
T ss_pred             ecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---cCcCCCCHHHEEEecCCCCCcEEEeeceee
Confidence            555555552      34788999999999999999999998   999999999999986655   999999998

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.83  E-value=5.3e-21  Score=204.95  Aligned_cols=132  Identities=23%  Similarity=0.296  Sum_probs=102.4

Q ss_pred             hhcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCC--cccHHHHHHHHH------hccccceecchHH--HHHHh
Q 006915          403 ATDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSAS--GQGLEEFKNEIE------TSNSNATIGANVK--AFVRE  471 (626)
Q Consensus       403 ~~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~--~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~  471 (626)
                      ..++|++.+.||+|+||.||+|.. .+++.||+|.+....  ....+.+.+|+.      ++|++++.+....  .++.+
T Consensus         9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv   88 (444)
T 3soa_A            9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI   88 (444)
T ss_dssp             HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred             ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence            356799999999999999999987 468999999997543  223445666665      4777877765432  23345


Q ss_pred             hccccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEEC---CCCcEEEEecCcc
Q 006915          472 MKTFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLD---QEMNPKISDFGLA  537 (626)
Q Consensus       472 ~~~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~---~~~~~kl~DFGla  537 (626)
                      ++++.++++.      ..+++.....++.||+.||.|||+.+   |+||||||+|||++   +++.+||+|||++
T Consensus        89 ~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~g---ivHrDlKp~NIll~~~~~~~~vkL~DFG~a  160 (444)
T 3soa_A           89 FDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMG---VVHRNLKPENLLLASKLKGAAVKLADFGLA  160 (444)
T ss_dssp             ECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSSTTEEESBSSTTCCEEECCCSSC
T ss_pred             EEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEeccCCCCcEEEccCcee
Confidence            6666666653      34788999999999999999999998   99999999999998   4678999999998

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.83  E-value=2.7e-21  Score=196.00  Aligned_cols=183  Identities=20%  Similarity=0.249  Sum_probs=124.5

Q ss_pred             hhcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCCccc----HHHHHHHHHhccccceecchHH---HHHHhhcc
Q 006915          403 ATDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQG----LEEFKNEIETSNSNATIGANVK---AFVREMKT  474 (626)
Q Consensus       403 ~~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~~~----~~~~~~e~~~~~~~~~~~~~~~---~~~~~~~~  474 (626)
                      ..++|.+.+.||+|+||.||+|+. .+++.||||.+.......    +.++...+.+.+.+..+..+..   .++.++++
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~   86 (296)
T 4hgt_A            7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL   86 (296)
T ss_dssp             ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred             cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEc
Confidence            457899999999999999999987 568999999876432211    1222333334444444332211   12233444


Q ss_pred             ccCCCcc-------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEE---CCCCcEEEEecCcchhccccc
Q 006915          475 FSDPTLS-------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILL---DQEMNPKISDFGLALDMMDQK  544 (626)
Q Consensus       475 ~~~~~l~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl---~~~~~~kl~DFGla~~~~~~~  544 (626)
                      . ++++.       ..+++..++.++.||+.||.|||+.+   |+||||||+|||+   ++++.+||+|||++..+....
T Consensus        87 ~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~  162 (296)
T 4hgt_A           87 L-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR  162 (296)
T ss_dssp             C-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTT
T ss_pred             c-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeeeeccCCCCeEEEecCccceeccCcc
Confidence            4 44432       34789999999999999999999998   9999999999999   788999999999983221110


Q ss_pred             --------------------------------------------------cCCCC--------------------C----
Q 006915          545 --------------------------------------------------LHASS--------------------K----  550 (626)
Q Consensus       545 --------------------------------------------------~~~~~--------------------~----  550 (626)
                                                                        .+...                    +    
T Consensus       163 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (296)
T 4hgt_A          163 THQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL  242 (296)
T ss_dssp             TCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHH
T ss_pred             cCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchhhhh
Confidence                                                              00000                    0    


Q ss_pred             -hHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccccC
Q 006915          551 -PNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNL  589 (626)
Q Consensus       551 -~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~~~~  589 (626)
                       ......+.+++..|++.+|.+||++.++++.|+....+.
T Consensus       243 ~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~  282 (296)
T 4hgt_A          243 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ  282 (296)
T ss_dssp             TTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHH
T ss_pred             hccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHh
Confidence             000245778888999999999999999999998875443

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.83  E-value=3.2e-21  Score=198.99  Aligned_cols=132  Identities=23%  Similarity=0.276  Sum_probs=99.8

Q ss_pred             hcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCCcc----cHHHHHHHH-HhccccceecchHH--HHHHhhccc
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQ----GLEEFKNEI-ETSNSNATIGANVK--AFVREMKTF  475 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~~----~~~~~~~e~-~~~~~~~~~~~~~~--~~~~~~~~~  475 (626)
                      .++|.+.+.||+|+||.||+|+. .+++.||||.+......    .+.++...+ .+++++.+.+....  .++.+++++
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~   87 (330)
T 2izr_A            8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL   87 (330)
T ss_dssp             TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC
T ss_pred             cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC
Confidence            36799999999999999999986 56899999998753321    122333444 55777777654332  222344554


Q ss_pred             cCCCcc-------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCc-----EEEEecCcchh
Q 006915          476 SDPTLS-------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMN-----PKISDFGLALD  539 (626)
Q Consensus       476 ~~~~l~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~-----~kl~DFGla~~  539 (626)
                       ++++.       ..+++..++.++.||+.||+|||+.+   |+||||||+|||++.++.     +||+|||++..
T Consensus        88 -~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~  159 (330)
T 2izr_A           88 -GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKN---LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKE  159 (330)
T ss_dssp             -CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTCTTSEEECCCTTCEE
T ss_pred             -CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeeccCCCCCCceEEEEEccccee
Confidence             44442       35789999999999999999999998   999999999999998887     99999999843

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.83  E-value=3.6e-21  Score=193.00  Aligned_cols=131  Identities=30%  Similarity=0.344  Sum_probs=102.9

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC-cccHHHHHHHHHh------ccccceecchHH--HHHHhhc
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS-GQGLEEFKNEIET------SNSNATIGANVK--AFVREMK  473 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~  473 (626)
                      .++|++.+.||+|+||.||+|+.. +++.||||.+.... ....+.+.+|+..      ++++++.+....  .++.+++
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   85 (276)
T 2yex_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   85 (276)
T ss_dssp             HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence            457899999999999999999885 68999999997433 2334566677654      667776664432  2223455


Q ss_pred             cccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          474 TFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       474 ~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++.++++..      .+++..+..++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus        86 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~  152 (276)
T 2yex_A           86 YCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA  152 (276)
T ss_dssp             CCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred             ecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCChHHEEEccCCCEEEeeCCCc
Confidence            555545433      3678899999999999999999998   999999999999999999999999987

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.83  E-value=2.1e-21  Score=196.21  Aligned_cols=130  Identities=28%  Similarity=0.462  Sum_probs=93.9

Q ss_pred             hcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCCc-ccHHHHHHHH-------HhccccceecchHH--HHHHhh
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASG-QGLEEFKNEI-------ETSNSNATIGANVK--AFVREM  472 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~-~~~~~~~~e~-------~~~~~~~~~~~~~~--~~~~~~  472 (626)
                      .++|++.+.||+|+||.||+|+. .+++.||||++..... ....++..|.       .+++++++.+....  .++.++
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~   85 (290)
T 3fme_A            6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM   85 (290)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred             HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence            46799999999999999999987 4689999999975422 2222222222       23677777664432  122333


Q ss_pred             ccccCCCc----------ccCCCHHHHHHHHHHHHHHHHHHHhC-CCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          473 KTFSDPTL----------SALLHWEMRFNIIIGIARGLLYLHQD-SRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       473 ~~~~~~~l----------~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +++.+ ++          ...+++..+..++.|++.||.|||++ +   |+||||||+|||++.++.+||+|||++
T Consensus        86 e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~  157 (290)
T 3fme_A           86 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGIS  157 (290)
T ss_dssp             ECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSC---CCCCCCSGGGCEECTTCCEEBCCC---
T ss_pred             ehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeecCCc
Confidence            43332 22          23588999999999999999999997 7   999999999999999999999999987

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.83  E-value=2e-21  Score=201.87  Aligned_cols=131  Identities=21%  Similarity=0.316  Sum_probs=92.8

Q ss_pred             hcCccccccccccCeEEEEEEEcC----CCcEEEEEEecCCCcccH-----------HHHHHHH------Hhccccceec
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP----GGQQIAVKRLSSASGQGL-----------EEFKNEI------ETSNSNATIG  462 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~----~~~~vAvK~l~~~~~~~~-----------~~~~~e~------~~~~~~~~~~  462 (626)
                      .++|.+.+.||+|+||.||+|+..    .+..||||++........           ..+.+|+      .+++++++.+
T Consensus        36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~  115 (345)
T 2v62_A           36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG  115 (345)
T ss_dssp             SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred             CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence            357999999999999999999985    578899999875432211           1122332      2477777776


Q ss_pred             chHH------HHHHhhccccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCC--c
Q 006915          463 ANVK------AFVREMKTFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEM--N  528 (626)
Q Consensus       463 ~~~~------~~~~~~~~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~--~  528 (626)
                      ....      .++.+++++ ++++..      .+++..++.++.||+.||+|||+.+   |+||||||+|||++.++  .
T Consensus       116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~  191 (345)
T 2v62_A          116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENE---YVHGDIKAANLLLGYKNPDQ  191 (345)
T ss_dssp             EEEEESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEESSSTTS
T ss_pred             ccccccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCcCHHHEEEccCCCCc
Confidence            5433      223345555 444433      4789999999999999999999998   99999999999998887  9


Q ss_pred             EEEEecCcch
Q 006915          529 PKISDFGLAL  538 (626)
Q Consensus       529 ~kl~DFGla~  538 (626)
                      +||+|||+++
T Consensus       192 ~kL~Dfg~a~  201 (345)
T 2v62_A          192 VYLADYGLSY  201 (345)
T ss_dssp             EEECCCTTCE
T ss_pred             EEEEeCCCce
Confidence            9999999983

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.83  E-value=2.5e-21  Score=208.44  Aligned_cols=131  Identities=27%  Similarity=0.289  Sum_probs=97.8

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCC---CcccHHHHHHHHHh------ccccceecchHH--HHHHh
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSA---SGQGLEEFKNEIET------SNSNATIGANVK--AFVRE  471 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~---~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~  471 (626)
                      .++|++.+.||+|+||.||+|+.. +++.||||++...   .......+.+|+..      ++++.+.+.+..  .++.+
T Consensus       147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv  226 (446)
T 4ejn_A          147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV  226 (446)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred             hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence            467999999999999999999874 5899999999743   22334556666654      666666654432  33455


Q ss_pred             hccccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHh-CCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          472 MKTFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQ-DSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       472 ~~~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++++.++++.      ..+++..+..++.||+.||+|||+ .+   |+||||||+||||+.++.+||+|||++
T Consensus       227 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~g---iiHrDlkp~NIll~~~~~~kl~DFG~a  296 (446)
T 4ejn_A          227 MEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLC  296 (446)
T ss_dssp             ECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCCCCGGGEEECSSSCEEECCCCCC
T ss_pred             EeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCC---EEECCCCHHHEEECCCCCEEEccCCCc
Confidence            6777776663      347889999999999999999998 77   999999999999999999999999998

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.83  E-value=1.7e-21  Score=197.81  Aligned_cols=180  Identities=15%  Similarity=0.172  Sum_probs=127.5

Q ss_pred             hcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCCcccHHHHHHHHH-------hccccceecchHH--HHHHhhc
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQGLEEFKNEIE-------TSNSNATIGANVK--AFVREMK  473 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~~~~~~~~~e~~-------~~~~~~~~~~~~~--~~~~~~~  473 (626)
                      .++|.+.+.||+|+||.||+|+. .+++.||||.+......  ..+.+|+.       +++++.+++....  .++.+++
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e   86 (298)
T 1csn_A            9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA--PQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID   86 (298)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTS--CCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCcc--HHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence            45799999999999999999986 56899999998743221  12333332       3455555543322  1223344


Q ss_pred             cccCCCcc-------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCc-----EEEEecCcchhcc
Q 006915          474 TFSDPTLS-------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMN-----PKISDFGLALDMM  541 (626)
Q Consensus       474 ~~~~~~l~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~-----~kl~DFGla~~~~  541 (626)
                      +. ++++.       ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.     +||+|||++..+.
T Consensus        87 ~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~  162 (298)
T 1csn_A           87 LL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKS---LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR  162 (298)
T ss_dssp             CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred             ec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEeccCCCCCCCeEEEEECccccccc
Confidence            44 44443       24789999999999999999999998   999999999999987776     9999999983221


Q ss_pred             ccc--------------------------------------------------cCCCC----Ch----------------
Q 006915          542 DQK--------------------------------------------------LHASS----KP----------------  551 (626)
Q Consensus       542 ~~~--------------------------------------------------~~~~~----~~----------------  551 (626)
                      ...                                                  .+...    ..                
T Consensus       163 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  242 (298)
T 1csn_A          163 DPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPL  242 (298)
T ss_dssp             CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCH
T ss_pred             cccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccH
Confidence            110                                                  00000    00                


Q ss_pred             -----HHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccccC
Q 006915          552 -----NEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNL  589 (626)
Q Consensus       552 -----~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~~~~  589 (626)
                           .....+.+++..||+.+|.+||++.++++.|+.+...+
T Consensus       243 ~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~  285 (298)
T 1csn_A          243 RELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERL  285 (298)
T ss_dssp             HHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             HHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhc
Confidence                 01235678888999999999999999999999876444

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.83  E-value=4e-21  Score=201.64  Aligned_cols=127  Identities=33%  Similarity=0.349  Sum_probs=97.4

Q ss_pred             cccccccccCeEEEEEEEc-CCCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH--HHHHhhccccCC
Q 006915          408 SEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK--AFVREMKTFSDP  478 (626)
Q Consensus       408 ~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~~~~~  478 (626)
                      ...+.||+|+||.||+|+. .+++.||||+++.......+++.+|++.      +|++++++.+..  .++.+++++.++
T Consensus        92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~  171 (373)
T 2x4f_A           92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGG  171 (373)
T ss_dssp             EEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred             ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCC
Confidence            3357899999999999987 4689999999987655566778888765      677777665432  233456666666


Q ss_pred             Cccc-------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEE--CCCCcEEEEecCcc
Q 006915          479 TLSA-------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILL--DQEMNPKISDFGLA  537 (626)
Q Consensus       479 ~l~~-------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl--~~~~~~kl~DFGla  537 (626)
                      ++..       .+++..+..++.||+.||.|||+.+   |+||||||+|||+  +.++.+||+|||++
T Consensus       172 ~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~DFG~a  236 (373)
T 2x4f_A          172 ELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLA  236 (373)
T ss_dssp             EEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEETTTTEEEECCCSSC
T ss_pred             cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEecCCCCcEEEEeCCCc
Confidence            5532       4788899999999999999999998   9999999999999  67789999999998

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.83  E-value=3.1e-21  Score=201.79  Aligned_cols=138  Identities=22%  Similarity=0.286  Sum_probs=106.5

Q ss_pred             CHHHHHHhhcCccccccccccCeEEEEEEEcCCCcEEEEEEecCCCcc-----------cHHHHHHHHHh------cccc
Q 006915          396 DFESILAATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQ-----------GLEEFKNEIET------SNSN  458 (626)
Q Consensus       396 ~~~~l~~~~~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~-----------~~~~~~~e~~~------~~~~  458 (626)
                      ...++....++|.+.+.||+|+||.||+|...+++.||||++......           ..+.+.+|++.      +|++
T Consensus        13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv   92 (362)
T 3pg1_A           13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL   92 (362)
T ss_dssp             HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred             HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence            456778889999999999999999999999988999999998642211           12566666653      6777


Q ss_pred             ceecchHH-------HHHHhhccccCCCc-------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEEC
Q 006915          459 ATIGANVK-------AFVREMKTFSDPTL-------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLD  524 (626)
Q Consensus       459 ~~~~~~~~-------~~~~~~~~~~~~~l-------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~  524 (626)
                      ++.+....       .++.+++++. +++       ...+++..+..++.||+.||.|||+.+   |+||||||+|||++
T Consensus        93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~  168 (362)
T 3pg1_A           93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAG---VVHRDLHPGNILLA  168 (362)
T ss_dssp             CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEC
T ss_pred             ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCc---CEecCCChHHEEEc
Confidence            76654321       1223334333 222       224789999999999999999999998   99999999999999


Q ss_pred             CCCcEEEEecCcc
Q 006915          525 QEMNPKISDFGLA  537 (626)
Q Consensus       525 ~~~~~kl~DFGla  537 (626)
                      .++.+||+|||++
T Consensus       169 ~~~~~kl~Dfg~~  181 (362)
T 3pg1_A          169 DNNDITICDFNLA  181 (362)
T ss_dssp             TTCCEEECCTTC-
T ss_pred             CCCCEEEEecCcc
Confidence            9999999999998

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.83  E-value=5.9e-21  Score=198.82  Aligned_cols=130  Identities=27%  Similarity=0.374  Sum_probs=102.3

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCC-----CcccHHHHHHHHHh------ccccceecchHH--HHHH
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSA-----SGQGLEEFKNEIET------SNSNATIGANVK--AFVR  470 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~-----~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~  470 (626)
                      +.|++.+.||+|+||.||+|+.. +++.||||++...     .....+.+.+|+..      +|++++++....  .++.
T Consensus        24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l  103 (351)
T 3c0i_A           24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM  103 (351)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence            46899999999999999999874 6899999998632     12245667777654      777777764432  3344


Q ss_pred             hhccccCCCccc----------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCc---EEEEecCcc
Q 006915          471 EMKTFSDPTLSA----------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMN---PKISDFGLA  537 (626)
Q Consensus       471 ~~~~~~~~~l~~----------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~---~kl~DFGla  537 (626)
                      +++++.++++..          .+++..+..++.||+.||.|||+++   |+||||||+|||++.++.   +||+|||++
T Consensus       104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a  180 (351)
T 3c0i_A          104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVA  180 (351)
T ss_dssp             EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred             EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChHHeEEecCCCCCcEEEecCcce
Confidence            566666666532          3688889999999999999999998   999999999999987655   999999998

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.83  E-value=2.2e-21  Score=194.94  Aligned_cols=182  Identities=19%  Similarity=0.223  Sum_probs=131.4

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC--cccHHHHHHHHHh------ccccceecchHH----HHHH
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS--GQGLEEFKNEIET------SNSNATIGANVK----AFVR  470 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~e~~~------~~~~~~~~~~~~----~~~~  470 (626)
                      .++|++.+.||+|+||.||+++.. +++.||||.+....  ....+.+.+|+..      ++++++.+....    .++.
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   84 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI   84 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence            467899999999999999999885 68999999997532  2334556666553      778887764421    2334


Q ss_pred             hhccccCCCccc----------CCCHHHHHHHHHHHHHHHHHHHhCC--CCceEecCCCCCCeEECCCCcEEEEecCcch
Q 006915          471 EMKTFSDPTLSA----------LLHWEMRFNIIIGIARGLLYLHQDS--RLRIIHRDLKTSNILLDQEMNPKISDFGLAL  538 (626)
Q Consensus       471 ~~~~~~~~~l~~----------~l~~~~~~~i~~~ia~gL~yLH~~~--~~~ivHrDlkp~NILl~~~~~~kl~DFGla~  538 (626)
                      +++++.++++..          .+++..++.++.|++.||+|||+.+  ..+|+||||||+|||++.++.+||+|||++.
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~  164 (279)
T 2w5a_A           85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR  164 (279)
T ss_dssp             EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred             EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence            556555555433          3788899999999999999999975  2349999999999999999999999999872


Q ss_pred             hccc-------------------------------------------cccC------------------CCCChHHHHHH
Q 006915          539 DMMD-------------------------------------------QKLH------------------ASSKPNEILKC  557 (626)
Q Consensus       539 ~~~~-------------------------------------------~~~~------------------~~~~~~~~~~~  557 (626)
                      .+..                                           ....                  ...+......+
T Consensus       165 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l  244 (279)
T 2w5a_A          165 ILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDEL  244 (279)
T ss_dssp             HC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCCTTSCHHH
T ss_pred             eeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhcccccCCcccCHHH
Confidence            2110                                           0000                  00111122456


Q ss_pred             HHHHHHhcccCCCCCCCHHHHHHHhccc
Q 006915          558 INVGLLCVQEDPNDRPTMSDVVIMLGSE  585 (626)
Q Consensus       558 ~~~~~~C~~~~p~~RPs~~~vl~~L~~~  585 (626)
                      .+++..||+.+|.+||++.++++.+...
T Consensus       245 ~~li~~~l~~~p~~Rps~~~ll~~~~~~  272 (279)
T 2w5a_A          245 NEIITRMLNLKDYHRPSVEEILENPLIL  272 (279)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHTSTTCC
T ss_pred             HHHHHHHcCCCcccCCCHHHHHhChhhh
Confidence            7888899999999999999999977554

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.83  E-value=1.1e-20  Score=193.69  Aligned_cols=130  Identities=25%  Similarity=0.296  Sum_probs=102.7

Q ss_pred             cCcccc-ccccccCeEEEEEEEcC-CCcEEEEEEecCCCcccHHHHHHHHH-------hccccceecchHH--HHHHhhc
Q 006915          405 DNFSEA-NKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQGLEEFKNEIE-------TSNSNATIGANVK--AFVREMK  473 (626)
Q Consensus       405 ~~f~~~-~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~e~~-------~~~~~~~~~~~~~--~~~~~~~  473 (626)
                      +.|.+. +.||+|+||.||+|+.. +++.||||++..........+.+|++       ++|++++++....  .++.+++
T Consensus        12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e   91 (316)
T 2ac3_A           12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE   91 (316)
T ss_dssp             TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence            457764 78999999999999974 68999999998665555667777765       3667776664332  3334566


Q ss_pred             cccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCc---EEEEecCcc
Q 006915          474 TFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMN---PKISDFGLA  537 (626)
Q Consensus       474 ~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~---~kl~DFGla  537 (626)
                      ++.++++.      ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.   +||+|||++
T Consensus        92 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~  161 (316)
T 2ac3_A           92 KMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFDLG  161 (316)
T ss_dssp             CCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESCSSSSCSEEECCTTCC
T ss_pred             cCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEEccCCCcCceEEEEccCc
Confidence            66666553      34678889999999999999999998   999999999999998776   999999987

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.83  E-value=5.6e-21  Score=202.38  Aligned_cols=130  Identities=22%  Similarity=0.303  Sum_probs=102.1

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC-cccHHHHHHHHH------hccccceecchHH----HHHHhh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS-GQGLEEFKNEIE------TSNSNATIGANVK----AFVREM  472 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~e~~------~~~~~~~~~~~~~----~~~~~~  472 (626)
                      ++|.+.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++      ++|++++++....    .++.++
T Consensus         9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~   88 (396)
T 4eut_A            9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM   88 (396)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence            56889999999999999999985 48999999997533 233455556654      4778887764332    223445


Q ss_pred             ccccCCCcccC---------CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEE----CCCCcEEEEecCcc
Q 006915          473 KTFSDPTLSAL---------LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILL----DQEMNPKISDFGLA  537 (626)
Q Consensus       473 ~~~~~~~l~~~---------l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl----~~~~~~kl~DFGla  537 (626)
                      +++.++++..+         +++..++.++.||+.||.|||+.+   |+||||||+|||+    +.++.+||+|||++
T Consensus        89 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a  163 (396)
T 4eut_A           89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA  163 (396)
T ss_dssp             CCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEECTTSCEEEEECCGGGC
T ss_pred             ecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCC---EEECCcCHHHEEEeecCCCceeEEEecCCCc
Confidence            66555544322         788999999999999999999998   9999999999999    78888999999998

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.83  E-value=1.7e-21  Score=201.59  Aligned_cols=175  Identities=21%  Similarity=0.248  Sum_probs=126.3

Q ss_pred             hcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCCc--------cc------HHHHHHHHHhccccceecchHH--
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASG--------QG------LEEFKNEIETSNSNATIGANVK--  466 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~--------~~------~~~~~~e~~~~~~~~~~~~~~~--  466 (626)
                      .++|.+.+.||+|+||.||+|+. .+++.||||.+.....        ..      +.++...+.++|++++++....  
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~  102 (335)
T 3dls_A           23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG  102 (335)
T ss_dssp             HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred             ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence            56799999999999999999986 4689999999975321        11      2223333445788887765432  


Q ss_pred             HHHHhhccccCC-Ccc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchh
Q 006915          467 AFVREMKTFSDP-TLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALD  539 (626)
Q Consensus       467 ~~~~~~~~~~~~-~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~  539 (626)
                      .++.+++++..+ ++.      ..+++..+..|+.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++..
T Consensus       103 ~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~  179 (335)
T 3dls_A          103 FFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKD---IIHRDIKDENIVIAEDFTIKLIDFGSAAY  179 (335)
T ss_dssp             EEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             EEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eEEeccCHHHEEEcCCCcEEEeecccceE
Confidence            222344444333 332      24789999999999999999999998   99999999999999999999999999832


Q ss_pred             cccc---------------ccCC---------------------------------------CCChHHHHHHHHHHHHhc
Q 006915          540 MMDQ---------------KLHA---------------------------------------SSKPNEILKCINVGLLCV  565 (626)
Q Consensus       540 ~~~~---------------~~~~---------------------------------------~~~~~~~~~~~~~~~~C~  565 (626)
                      +...               +...                                       ..+......+.+++..|+
T Consensus       180 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~l~~li~~~L  259 (335)
T 3dls_A          180 LERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVEAAIHPPYLVSKELMSLVSGLL  259 (335)
T ss_dssp             CCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGTTTCCCCSSCCCHHHHHHHHHHT
T ss_pred             CCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHHHhhccCCCcccCHHHHHHHHHHc
Confidence            2111               0000                                       000011235677788999


Q ss_pred             ccCCCCCCCHHHHHHH
Q 006915          566 QEDPNDRPTMSDVVIM  581 (626)
Q Consensus       566 ~~~p~~RPs~~~vl~~  581 (626)
                      +.||.+||++.++++.
T Consensus       260 ~~dP~~Rps~~ell~h  275 (335)
T 3dls_A          260 QPVPERRTTLEKLVTD  275 (335)
T ss_dssp             CSSGGGSCCHHHHHHC
T ss_pred             cCChhhCcCHHHHhcC
Confidence            9999999999999986

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.83  E-value=2.7e-21  Score=195.55  Aligned_cols=180  Identities=24%  Similarity=0.350  Sum_probs=124.6

Q ss_pred             hcCccccccccccCeEEEEEEEcC--CCc--EEEEEEecCC---CcccHHHHHHHHHh------ccccceecchHH-HHH
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP--GGQ--QIAVKRLSSA---SGQGLEEFKNEIET------SNSNATIGANVK-AFV  469 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~--~~~--~vAvK~l~~~---~~~~~~~~~~e~~~------~~~~~~~~~~~~-~~~  469 (626)
                      .++|++.+.||+|+||.||+|++.  +++  .||||.++..   .....+.+.+|++.      ++++++++.... .+.
T Consensus        17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   96 (291)
T 1u46_A           17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK   96 (291)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCE
T ss_pred             hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCCce
Confidence            357899999999999999999863  333  6999998753   22345567777654      677777665433 222


Q ss_pred             HhhccccCCCcc-------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhc--
Q 006915          470 REMKTFSDPTLS-------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM--  540 (626)
Q Consensus       470 ~~~~~~~~~~l~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~--  540 (626)
                      ..++++.++++.       ..+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++..+  
T Consensus        97 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~  173 (291)
T 1u46_A           97 MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQ  173 (291)
T ss_dssp             EEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred             eeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEEcCCCCEEEccccccccccc
Confidence            344555555543       34778899999999999999999998   999999999999999999999999987211  


Q ss_pred             --------------------------------------------cc-cccC-------------------CCCChHHHHH
Q 006915          541 --------------------------------------------MD-QKLH-------------------ASSKPNEILK  556 (626)
Q Consensus       541 --------------------------------------------~~-~~~~-------------------~~~~~~~~~~  556 (626)
                                                                  +. ....                   ...+......
T Consensus       174 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (291)
T 1u46_A          174 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQD  253 (291)
T ss_dssp             -CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCCTTCCHH
T ss_pred             cccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccCCCCCCCcCcCHH
Confidence                                                        11 0000                   0001122245


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 006915          557 CINVGLLCVQEDPNDRPTMSDVVIMLGSEA  586 (626)
Q Consensus       557 ~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~  586 (626)
                      +.+++..|++.+|.+||++.++++.|....
T Consensus       254 l~~li~~~l~~~p~~Rps~~~l~~~l~~~~  283 (291)
T 1u46_A          254 IYNVMVQCWAHKPEDRPTFVALRDFLLEAQ  283 (291)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred             HHHHHHHHccCCcccCcCHHHHHHHHHHhC
Confidence            778888999999999999999999998763

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.83  E-value=6.8e-21  Score=193.10  Aligned_cols=181  Identities=20%  Similarity=0.260  Sum_probs=127.6

Q ss_pred             hcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchH---HHHHHhhc
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANV---KAFVREMK  473 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~---~~~~~~~~  473 (626)
                      .++|.+.+.||+|+||.||+|+. .+++.||||++......  .++.+|+..      .+.+..+..+.   ..++.+++
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e   85 (296)
T 3uzp_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME   85 (296)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC--CHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch--hHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence            56899999999999999999997 56899999998754322  234444443      33333332211   11223344


Q ss_pred             cccCCCcc-------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEE---CCCCcEEEEecCcchhcccc
Q 006915          474 TFSDPTLS-------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILL---DQEMNPKISDFGLALDMMDQ  543 (626)
Q Consensus       474 ~~~~~~l~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl---~~~~~~kl~DFGla~~~~~~  543 (626)
                      ++ ++++.       ..+++..++.++.||+.||.|||+++   |+||||||+|||+   +.++.+||+|||++..+...
T Consensus        86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~  161 (296)
T 3uzp_A           86 LL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA  161 (296)
T ss_dssp             CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred             ec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccc
Confidence            44 44332       34788999999999999999999998   9999999999999   48899999999998322110


Q ss_pred             --------------------------------------------------ccCCCC--------------------C---
Q 006915          544 --------------------------------------------------KLHASS--------------------K---  550 (626)
Q Consensus       544 --------------------------------------------------~~~~~~--------------------~---  550 (626)
                                                                        ..+...                    +   
T Consensus       162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (296)
T 3uzp_A          162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEV  241 (296)
T ss_dssp             TTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHH
T ss_pred             ccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchHH
Confidence                                                              000000                    0   


Q ss_pred             --hHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccccCC
Q 006915          551 --PNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLA  590 (626)
Q Consensus       551 --~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~~~~~  590 (626)
                        ......+.+++..||+.||.+||++.++++.|.....+..
T Consensus       242 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~  283 (296)
T 3uzp_A          242 LCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG  283 (296)
T ss_dssp             HTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred             HHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcC
Confidence              0012357788889999999999999999999988754443

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.83  E-value=5.9e-21  Score=201.71  Aligned_cols=131  Identities=17%  Similarity=0.236  Sum_probs=104.0

Q ss_pred             hcCcccccccccc--CeEEEEEEEcC-CCcEEEEEEecCCC--cccHHHHHHHHH------hccccceecchHH--HHHH
Q 006915          404 TDNFSEANKLGKG--GFGPVYKAKFP-GGQQIAVKRLSSAS--GQGLEEFKNEIE------TSNSNATIGANVK--AFVR  470 (626)
Q Consensus       404 ~~~f~~~~~lG~G--~fG~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~  470 (626)
                      .++|++.+.||+|  +||.||+|+.. +++.||||++....  ....+.+.+|+.      ++|++++++....  .++.
T Consensus        24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l  103 (389)
T 3gni_B           24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV  103 (389)
T ss_dssp             GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence            4679999999999  99999999985 69999999997532  233455666655      4778877765432  2334


Q ss_pred             hhccccCCCcc--------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          471 EMKTFSDPTLS--------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       471 ~~~~~~~~~l~--------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +++++.++++.        ..+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus       104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~kl~dfg~~  175 (389)
T 3gni_B          104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSN  175 (389)
T ss_dssp             EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCGGGC
T ss_pred             EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccccc
Confidence            45555555543        34788899999999999999999998   999999999999999999999999876

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.83  E-value=4.3e-21  Score=195.23  Aligned_cols=131  Identities=29%  Similarity=0.410  Sum_probs=103.5

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH--HHHHhhcc
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK--AFVREMKT  474 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~  474 (626)
                      .+.|++.+.||+|+||.||+|+.. +++.||+|.+........+.+.+|++.      ++++++.+....  .++.++++
T Consensus        18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   97 (302)
T 2j7t_A           18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEF   97 (302)
T ss_dssp             GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEEC
T ss_pred             ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEe
Confidence            467999999999999999999985 589999999987666666777777654      677777664432  22234455


Q ss_pred             ccCCCcc-------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          475 FSDPTLS-------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       475 ~~~~~l~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +.++++.       ..+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus        98 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~  164 (302)
T 2j7t_A           98 CPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKR---IIHRDLKAGNVLMTLEGDIRLADFGVS  164 (302)
T ss_dssp             CTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCCHHH
T ss_pred             CCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEECCCCCEEEEECCCC
Confidence            5554442       34789999999999999999999998   999999999999999999999999986

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.83  E-value=4.8e-21  Score=200.21  Aligned_cols=131  Identities=24%  Similarity=0.373  Sum_probs=103.1

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC--cccHHHHHHHHH------hccccceecchHH--HHHHhh
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS--GQGLEEFKNEIE------TSNSNATIGANVK--AFVREM  472 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~  472 (626)
                      .++|.+.+.||+|+||.||+|... +++.||||.+....  ....+.+.+|+.      ++|++++.+....  .++.++
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~  107 (362)
T 2bdw_A           28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF  107 (362)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            467999999999999999999874 58999999997532  233455666665      4777777765432  233455


Q ss_pred             ccccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCC---CcEEEEecCcc
Q 006915          473 KTFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQE---MNPKISDFGLA  537 (626)
Q Consensus       473 ~~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~---~~~kl~DFGla  537 (626)
                      +++.++++.      ..+++..+..++.||+.||.|||+.+   |+||||||+|||++.+   +.+||+|||++
T Consensus       108 e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a  178 (362)
T 2bdw_A          108 DLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA  178 (362)
T ss_dssp             CCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred             ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEeecCcc
Confidence            666666552      34788999999999999999999998   9999999999999865   45999999998

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.83  E-value=2.4e-20  Score=191.34  Aligned_cols=130  Identities=26%  Similarity=0.376  Sum_probs=87.7

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC-cccHHHHHHHHHh------ccccceecchHH--HHHHhhc
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS-GQGLEEFKNEIET------SNSNATIGANVK--AFVREMK  473 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~  473 (626)
                      .++|++.+.||+|+||.||+|+.. +++.||||+++... ......+.+|++.      +|++++.+....  .++.+++
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   83 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE   83 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence            467889999999999999999885 58999999997543 2334566677654      677777664332  1222334


Q ss_pred             cccCCCc------------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          474 TFSDPTL------------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       474 ~~~~~~l------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++. +++            ...+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus        84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~  155 (317)
T 2pmi_A           84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLA  155 (317)
T ss_dssp             CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCSSC
T ss_pred             ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCChHHeEEcCCCCEEECcCccc
Confidence            333 222            234788889999999999999999998   999999999999999999999999998

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.83  E-value=6.3e-21  Score=196.64  Aligned_cols=128  Identities=24%  Similarity=0.358  Sum_probs=101.0

Q ss_pred             hcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCCcccHHHHHHHHH-------hccccceecchHH----HHHHh
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQGLEEFKNEIE-------TSNSNATIGANVK----AFVRE  471 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~~~~~~~~~e~~-------~~~~~~~~~~~~~----~~~~~  471 (626)
                      .++|++.+.||+|+||.||+|+. .+++.||||.++...   .+.+.+|+.       +++++.+.+....    .++.+
T Consensus        35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv  111 (330)
T 3nsz_A           35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV  111 (330)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred             CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc---hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence            36799999999999999999986 568999999997533   344555543       4677777664432    22344


Q ss_pred             hccccCCCccc---CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCC-cEEEEecCcc
Q 006915          472 MKTFSDPTLSA---LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEM-NPKISDFGLA  537 (626)
Q Consensus       472 ~~~~~~~~l~~---~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~-~~kl~DFGla  537 (626)
                      ++++.++++..   .+++..+..++.||+.||+|||+.+   |+||||||+|||++.++ .+||+|||++
T Consensus       112 ~e~~~~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~~kl~Dfg~a  178 (330)
T 3nsz_A          112 FEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLA  178 (330)
T ss_dssp             EECCCCCCHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCCTTC
T ss_pred             EeccCchhHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEcCCCCEEEEEeCCCc
Confidence            56666655433   3778899999999999999999998   99999999999999776 8999999998

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.83  E-value=3.3e-21  Score=196.97  Aligned_cols=184  Identities=21%  Similarity=0.222  Sum_probs=131.5

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCc---ccHHHHHHHHHh------ccccceecchHH--HHHHh
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASG---QGLEEFKNEIET------SNSNATIGANVK--AFVRE  471 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~  471 (626)
                      .++|.+.+.||+|+||.||+|+.. +++.||||.+.....   ...+.+.+|+..      ++++++.+....  .++..
T Consensus        33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv  112 (309)
T 2h34_A           33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD  112 (309)
T ss_dssp             -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence            468999999999999999999975 688999999975432   224567777664      666666654322  22234


Q ss_pred             hccccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhcc----
Q 006915          472 MKTFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMM----  541 (626)
Q Consensus       472 ~~~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~----  541 (626)
                      ++++.++++..      .+++..++.++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||++....    
T Consensus       113 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~  189 (309)
T 2h34_A          113 MRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAG---ATHRDVKPENILVSADDFAYLVDFGIASATTDEKL  189 (309)
T ss_dssp             EECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSCCC---------
T ss_pred             EEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCc---CCcCCCChHHEEEcCCCCEEEecCccCcccccccc
Confidence            45555544433      4788999999999999999999998   9999999999999999999999999872111    


Q ss_pred             -------------ccccC---------------------------CC--------------------CChHHHHHHHHHH
Q 006915          542 -------------DQKLH---------------------------AS--------------------SKPNEILKCINVG  561 (626)
Q Consensus       542 -------------~~~~~---------------------------~~--------------------~~~~~~~~~~~~~  561 (626)
                                   .++..                           ..                    ........+..++
T Consensus       190 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  269 (309)
T 2h34_A          190 TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIPRPSTVRPGIPVAFDAVI  269 (309)
T ss_dssp             -------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHSCCCCGGGTSTTCCTHHHHHH
T ss_pred             ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhccCCCCccccCCCCCHHHHHHH
Confidence                         11100                           00                    0001122466788


Q ss_pred             HHhcccCCCCCC-CHHHHHHHhccccccCC
Q 006915          562 LLCVQEDPNDRP-TMSDVVIMLGSEAMNLA  590 (626)
Q Consensus       562 ~~C~~~~p~~RP-s~~~vl~~L~~~~~~~~  590 (626)
                      ..||+.||.+|| ++.+++..|+.......
T Consensus       270 ~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~  299 (309)
T 2h34_A          270 ARGMAKNPEDRYVTCGDLSAAAHAALATAD  299 (309)
T ss_dssp             HHHTCSSGGGSCSSHHHHHHHHHHTCC---
T ss_pred             HHhccCCHHHHHHhHHHHHHHHHHHHHhhc
Confidence            899999999999 99999999988754433

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.83  E-value=6.4e-21  Score=198.32  Aligned_cols=130  Identities=25%  Similarity=0.337  Sum_probs=97.0

Q ss_pred             hhcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCcccHHHHHHH------HHhccccceecchHH--HHHHhhc
Q 006915          403 ATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQGLEEFKNE------IETSNSNATIGANVK--AFVREMK  473 (626)
Q Consensus       403 ~~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~e------~~~~~~~~~~~~~~~--~~~~~~~  473 (626)
                      ..+.|.+.+.||+|+||.||+|+.. +++.||||+++...  ..+.+.+|      +.+++++++.+.+..  .++.+++
T Consensus        51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  128 (349)
T 2w4o_A           51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE  128 (349)
T ss_dssp             GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence            3567999999999999999999985 48899999997542  22334444      345788887765433  2334556


Q ss_pred             cccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECC---CCcEEEEecCcc
Q 006915          474 TFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQ---EMNPKISDFGLA  537 (626)
Q Consensus       474 ~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~---~~~~kl~DFGla  537 (626)
                      ++.++++..      .+++..+..++.||+.||.|||+.+   |+||||||+|||++.   ++.+||+|||++
T Consensus       129 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a  198 (349)
T 2w4o_A          129 LVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLS  198 (349)
T ss_dssp             CCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESSSSTTCCEEECCCC--
T ss_pred             eCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCcccEEEecCCCCCCEEEccCccc
Confidence            666555532      4688999999999999999999998   999999999999975   889999999998

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.83  E-value=1.5e-21  Score=201.24  Aligned_cols=181  Identities=28%  Similarity=0.367  Sum_probs=127.6

Q ss_pred             hcCccccccccccCeEEEEEEEc------CCCcEEEEEEecCC-CcccHHHHHHHHH------hccccceecchHH--HH
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKF------PGGQQIAVKRLSSA-SGQGLEEFKNEIE------TSNSNATIGANVK--AF  468 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~------~~~~~vAvK~l~~~-~~~~~~~~~~e~~------~~~~~~~~~~~~~--~~  468 (626)
                      .++|.+.+.||+|+||.||+|++      .+++.||||.+... ......++.+|+.      +++++++++....  .+
T Consensus        29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  108 (327)
T 2yfx_A           29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR  108 (327)
T ss_dssp             GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence            45789999999999999999985      24778999999743 2334556667765      3777777765433  22


Q ss_pred             HHhhccccCCCcc-------------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECC---CCcEEEE
Q 006915          469 VREMKTFSDPTLS-------------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQ---EMNPKIS  532 (626)
Q Consensus       469 ~~~~~~~~~~~l~-------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~---~~~~kl~  532 (626)
                      +.+++++.++++.             ..+++..++.++.||+.||.|||+.+   |+||||||+|||++.   +..+||+
T Consensus       109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---i~H~dlkp~NIli~~~~~~~~~kl~  185 (327)
T 2yfx_A          109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIG  185 (327)
T ss_dssp             EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred             EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eecCcCCHhHEEEecCCCcceEEEC
Confidence            2334444443332             34778899999999999999999998   999999999999984   4569999


Q ss_pred             ecCcchhc---------------------------------------------cc-cccCC-C-----------------
Q 006915          533 DFGLALDM---------------------------------------------MD-QKLHA-S-----------------  548 (626)
Q Consensus       533 DFGla~~~---------------------------------------------~~-~~~~~-~-----------------  548 (626)
                      |||++..+                                             +. ..... .                 
T Consensus       186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~  265 (327)
T 2yfx_A          186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD  265 (327)
T ss_dssp             CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCC
T ss_pred             ccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcCCCCC
Confidence            99987211                                             10 00000 0                 


Q ss_pred             CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccc
Q 006915          549 SKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAM  587 (626)
Q Consensus       549 ~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~~  587 (626)
                      .+......+.+++..||+.||.+||++.++++.|.....
T Consensus       266 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~  304 (327)
T 2yfx_A          266 PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ  304 (327)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhc
Confidence            001112346778889999999999999999999987643

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.83  E-value=4.3e-21  Score=198.51  Aligned_cols=131  Identities=26%  Similarity=0.345  Sum_probs=103.9

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHHHHh------ccccceecchHH--HHHHh
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNEIET------SNSNATIGANVK--AFVRE  471 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~  471 (626)
                      .++|.+.+.||+|+||.||+++.. +++.||+|.+....   ....+.+.+|+..      +|++++++....  .++..
T Consensus        40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  119 (335)
T 2owb_A           40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV  119 (335)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence            457899999999999999999985 48899999987532   2334566667653      677777665432  23344


Q ss_pred             hccccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          472 MKTFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       472 ~~~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++++.++++.      ..+++..++.++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus       120 ~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~  188 (335)
T 2owb_A          120 LELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLA  188 (335)
T ss_dssp             ECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTC
T ss_pred             EecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---CEecCCCchhEEEcCCCCEEEeeccCc
Confidence            5555555543      34788999999999999999999998   999999999999999999999999998

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.82  E-value=5.7e-21  Score=206.16  Aligned_cols=131  Identities=30%  Similarity=0.413  Sum_probs=104.6

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHHHHh------ccccceecchHH--HHHHh
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNEIET------SNSNATIGANVK--AFVRE  471 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~  471 (626)
                      .++|.+.+.||+|+||.||+|++. +|+.||||++....   ......+.+|+..      +|++++.+....  .++.+
T Consensus        15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv   94 (476)
T 2y94_A           15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV   94 (476)
T ss_dssp             ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence            357899999999999999999985 69999999997432   2334567777764      677777654332  23345


Q ss_pred             hccccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          472 MKTFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       472 ~~~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++++.++++..      .+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus        95 ~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDLkp~NIll~~~~~vkL~DFG~a  163 (476)
T 2y94_A           95 MEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLS  163 (476)
T ss_dssp             EECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEECTTCCEEECCCSSC
T ss_pred             EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---CCcccccHHHEEEecCCCeEEEeccch
Confidence            56665555433      4678999999999999999999998   999999999999999999999999998

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.82  E-value=2.2e-21  Score=199.77  Aligned_cols=141  Identities=32%  Similarity=0.450  Sum_probs=107.3

Q ss_pred             CccCHHHHHHhhcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCCcccHHHHHHHHH-------hccccceecch
Q 006915          393 PFIDFESILAATDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQGLEEFKNEIE-------TSNSNATIGAN  464 (626)
Q Consensus       393 ~~~~~~~l~~~~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~~~~~~~~~e~~-------~~~~~~~~~~~  464 (626)
                      +.+++.++....++|.+.+.||+|+||.||+|+. .+++.||||.+.... .....+.+|+.       +++++.+.+..
T Consensus        12 ~~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~   90 (326)
T 2x7f_A           12 DEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAF   90 (326)
T ss_dssp             ----CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEE
T ss_pred             hhccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEE
Confidence            3345555666788999999999999999999998 468999999997533 23345555543       47777776654


Q ss_pred             HH--------HHHHhhccccCCCcc--------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCc
Q 006915          465 VK--------AFVREMKTFSDPTLS--------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMN  528 (626)
Q Consensus       465 ~~--------~~~~~~~~~~~~~l~--------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~  528 (626)
                      ..        .++.+++++.++++.        ..+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.
T Consensus        91 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~  167 (326)
T 2x7f_A           91 IKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAE  167 (326)
T ss_dssp             EECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCC
T ss_pred             eeccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCcHHHEEEcCCCC
Confidence            32        223445555554442        34778889999999999999999998   999999999999999999


Q ss_pred             EEEEecCcc
Q 006915          529 PKISDFGLA  537 (626)
Q Consensus       529 ~kl~DFGla  537 (626)
                      +||+|||++
T Consensus       168 ~kl~Dfg~~  176 (326)
T 2x7f_A          168 VKLVDFGVS  176 (326)
T ss_dssp             EEECCCTTT
T ss_pred             EEEeeCcCc
Confidence            999999987

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.82  E-value=4.6e-21  Score=195.19  Aligned_cols=131  Identities=29%  Similarity=0.454  Sum_probs=103.0

Q ss_pred             hcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCC-cccHHHHHHHHHh------ccccceecchHH--HHHHhhc
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSAS-GQGLEEFKNEIET------SNSNATIGANVK--AFVREMK  473 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~-~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~  473 (626)
                      .+.|...+.||+|+||.||+|+. .+++.||||.+.... ....+.+.+|+..      ++++++++....  .++.+++
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  100 (303)
T 3a7i_A           21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME  100 (303)
T ss_dssp             GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence            34688899999999999999987 468999999997543 3445667777654      667776664432  2223445


Q ss_pred             cccCCCcc-----cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          474 TFSDPTLS-----ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       474 ~~~~~~l~-----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++.++++.     ..+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus       101 ~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~  166 (303)
T 3a7i_A          101 YLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVA  166 (303)
T ss_dssp             CCTTEEHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred             eCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChheEEECCCCCEEEeecccc
Confidence            55444433     24778999999999999999999998   999999999999999999999999998

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.82  E-value=9.2e-21  Score=202.73  Aligned_cols=129  Identities=27%  Similarity=0.284  Sum_probs=95.7

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCcccHHHHHHHHHh------------ccccceecchHH--HH
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQGLEEFKNEIET------------SNSNATIGANVK--AF  468 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~e~~~------------~~~~~~~~~~~~--~~  468 (626)
                      ..+|++.+.||+|+||.||+|+.. +++.||||+++... ....++.+|+..            ++++.+++....  .+
T Consensus        96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  174 (429)
T 3kvw_A           96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI  174 (429)
T ss_dssp             TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred             cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence            457999999999999999999875 58999999997532 223344444432            256665543321  12


Q ss_pred             HHhhccccCCCcc--------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCc--EEEEecCcc
Q 006915          469 VREMKTFSDPTLS--------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMN--PKISDFGLA  537 (626)
Q Consensus       469 ~~~~~~~~~~~l~--------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~--~kl~DFGla  537 (626)
                      +.+++++. +++.        ..+++..+..++.||+.||+|||+.+   |+||||||+||||+.++.  +||+|||++
T Consensus       175 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NILl~~~~~~~vkL~DFG~a  249 (429)
T 3kvw_A          175 CMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR---IIHCDLKPENILLKQQGRSGIKVIDFGSS  249 (429)
T ss_dssp             EEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHT---EECSCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred             EEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEccCCCcceEEeecccc
Confidence            22333332 2221        23788999999999999999999998   999999999999999887  999999998

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.82  E-value=7.7e-21  Score=195.93  Aligned_cols=131  Identities=29%  Similarity=0.378  Sum_probs=98.8

Q ss_pred             hcCccccccccccCeEEEEEEEc----CCCcEEEEEEecCCC----cccHHHHHHH------HHhccccceecchHH--H
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKF----PGGQQIAVKRLSSAS----GQGLEEFKNE------IETSNSNATIGANVK--A  467 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~----~~~~~vAvK~l~~~~----~~~~~~~~~e------~~~~~~~~~~~~~~~--~  467 (626)
                      .++|++.+.||+|+||.||+++.    .+++.||||+++...    ......+.+|      +.+++++++++....  .
T Consensus        16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~   95 (327)
T 3a62_A           16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK   95 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred             HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence            35789999999999999999987    468999999997532    1222334444      445778877765432  2


Q ss_pred             HHHhhccccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          468 FVREMKTFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       468 ~~~~~~~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++.+++++.++++.      ..+.+.....++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus        96 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~Dfg~~  168 (327)
T 3a62_A           96 LYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLC  168 (327)
T ss_dssp             EEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTSCEEECCCSCC
T ss_pred             EEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCC---EEcccCCHHHeEECCCCcEEEEeCCcc
Confidence            33455666555553      34678888999999999999999998   999999999999999999999999988

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.82  E-value=5.3e-21  Score=193.91  Aligned_cols=131  Identities=26%  Similarity=0.345  Sum_probs=103.5

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHHHHh------ccccceecchHH--HHHHh
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNEIET------SNSNATIGANVK--AFVRE  471 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~  471 (626)
                      .++|.+.+.||+|+||.||+++.. +++.||+|.+....   ....+.+.+|+..      +|++++.+....  .++..
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   93 (294)
T 2rku_A           14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV   93 (294)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence            357888999999999999999985 48899999987532   2334566677653      677777665432  22344


Q ss_pred             hccccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          472 MKTFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       472 ~~~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++++.++++.      ..+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus        94 ~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~  162 (294)
T 2rku_A           94 LELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLA  162 (294)
T ss_dssp             EECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred             EecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEcCCCCEEEEeccCc
Confidence            5555555543      34788999999999999999999998   999999999999999999999999998

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.82  E-value=1.4e-20  Score=203.27  Aligned_cols=132  Identities=23%  Similarity=0.363  Sum_probs=94.1

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCC--CcccHHHHHHHHHh------ccccceecchHH-------H
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSA--SGQGLEEFKNEIET------SNSNATIGANVK-------A  467 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~--~~~~~~~~~~e~~~------~~~~~~~~~~~~-------~  467 (626)
                      .++|.+.+.||+|+||.||+|+.. +++.||||++...  .....+.+.+|+++      +|++.+++....       .
T Consensus        52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  131 (458)
T 3rp9_A           52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE  131 (458)
T ss_dssp             CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence            367999999999999999999875 6899999999753  22334566666654      778887765421       1


Q ss_pred             HHHhhccccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchh
Q 006915          468 FVREMKTFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALD  539 (626)
Q Consensus       468 ~~~~~~~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~  539 (626)
                      ++.++++. ++++.      ..+++..+..++.||+.||.|||+.+   |+||||||+||||+.++.+||+|||+|+.
T Consensus       132 ~~lv~e~~-~~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---iiHrDlKp~NILl~~~~~~kl~DFGla~~  205 (458)
T 3rp9_A          132 LYVVLEIA-DSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLART  205 (458)
T ss_dssp             EEEEECCC-SEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred             EEEEEecc-ccchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhCC---cCCCCCChhhEEECCCCCEeecccccchh
Confidence            22333332 23322      34788999999999999999999998   99999999999999999999999999853

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.82  E-value=2.4e-21  Score=198.34  Aligned_cols=138  Identities=23%  Similarity=0.301  Sum_probs=102.1

Q ss_pred             cCHHHHHHhhcCccccccccccCeEEEEEEEcCCCcEEEEEEecCC--CcccHHHHHHHHHh--------ccccceecch
Q 006915          395 IDFESILAATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSA--SGQGLEEFKNEIET--------SNSNATIGAN  464 (626)
Q Consensus       395 ~~~~~l~~~~~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~--~~~~~~~~~~e~~~--------~~~~~~~~~~  464 (626)
                      +.++.+....++|.+.+.||+|+||.||+++..+++.||||.+...  .......+.+|+..        ++++++.+..
T Consensus        18 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~   97 (313)
T 3cek_A           18 LYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE   97 (313)
T ss_dssp             --CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEE
T ss_pred             CCeeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEe
Confidence            3444444556789999999999999999999988999999999743  23344566666543        4566665543


Q ss_pred             HH--HHHHhhccccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCc
Q 006915          465 VK--AFVREMKTFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGL  536 (626)
Q Consensus       465 ~~--~~~~~~~~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl  536 (626)
                      ..  .++..++ +.++++.      ..+++..+..++.||+.||.|||+.+   |+||||||+|||+++ +.+||+|||+
T Consensus        98 ~~~~~~~lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~-~~~kL~Dfg~  172 (313)
T 3cek_A           98 ITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVD-GMLKLIDFGI  172 (313)
T ss_dssp             ECSSEEEEEEC-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEET-TEEEECCCSS
T ss_pred             ecCCEEEEEEe-cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEEEC-CeEEEeeccc
Confidence            22  1112233 2333332      34778899999999999999999998   999999999999964 8999999999


Q ss_pred             c
Q 006915          537 A  537 (626)
Q Consensus       537 a  537 (626)
                      +
T Consensus       173 ~  173 (313)
T 3cek_A          173 A  173 (313)
T ss_dssp             S
T ss_pred             c
Confidence            8

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.82  E-value=5e-21  Score=194.70  Aligned_cols=173  Identities=18%  Similarity=0.222  Sum_probs=125.4

Q ss_pred             cCcccc-ccccccCeEEEEEEEc-CCCcEEEEEEecCCCcccHHH---HHHHHHhccccceecchHH------HHHHhhc
Q 006915          405 DNFSEA-NKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQGLEE---FKNEIETSNSNATIGANVK------AFVREMK  473 (626)
Q Consensus       405 ~~f~~~-~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~~~~~~---~~~e~~~~~~~~~~~~~~~------~~~~~~~  473 (626)
                      ++|.+. +.||+|+||.||+++. .+++.||||+++... ....+   +.+...++|++++++....      .++.+++
T Consensus        17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e   95 (299)
T 3m2w_A           17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCP-KARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVME   95 (299)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSH-HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEC
T ss_pred             cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecccH-HHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEe
Confidence            467666 7799999999999987 468999999997432 11111   1233345788887765422      2334566


Q ss_pred             cccCCCccc--------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECC---CCcEEEEecCcchhc--
Q 006915          474 TFSDPTLSA--------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQ---EMNPKISDFGLALDM--  540 (626)
Q Consensus       474 ~~~~~~l~~--------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~---~~~~kl~DFGla~~~--  540 (626)
                      ++.++++..        .+++..+..++.||+.||.|||+.+   |+||||||+|||++.   ++.+||+|||++...  
T Consensus        96 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~  172 (299)
T 3m2w_A           96 CLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTG  172 (299)
T ss_dssp             CCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTTCEECTT
T ss_pred             ecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEecCCCCCcEEEecccccccccc
Confidence            666655532        4788999999999999999999998   999999999999998   788999999998211  


Q ss_pred             -------------------cccccC-------------------C--CCC----hHHHHHHHHHHHHhcccCCCCCCCHH
Q 006915          541 -------------------MDQKLH-------------------A--SSK----PNEILKCINVGLLCVQEDPNDRPTMS  576 (626)
Q Consensus       541 -------------------~~~~~~-------------------~--~~~----~~~~~~~~~~~~~C~~~~p~~RPs~~  576 (626)
                                         +.....                   .  ..+    ......+.+++..|++.||.+||++.
T Consensus       173 ~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~  252 (299)
T 3m2w_A          173 EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTIT  252 (299)
T ss_dssp             CGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred             ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHH
Confidence                               111000                   0  011    11234678888999999999999999


Q ss_pred             HHHHH
Q 006915          577 DVVIM  581 (626)
Q Consensus       577 ~vl~~  581 (626)
                      ++++.
T Consensus       253 e~l~h  257 (299)
T 3m2w_A          253 EFMNH  257 (299)
T ss_dssp             HHHTS
T ss_pred             HHhcC
Confidence            99864

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.82  E-value=6.6e-21  Score=195.48  Aligned_cols=131  Identities=28%  Similarity=0.312  Sum_probs=103.7

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHHHH------hccccceecchHH--HHHHh
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNEIE------TSNSNATIGANVK--AFVRE  471 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~  471 (626)
                      .++|++.+.||+|+||.||+++.. +++.||||.++...   ....+.+.+|+.      +++++++.+....  .++.+
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv   84 (318)
T 1fot_A            5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI   84 (318)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence            357899999999999999999885 68999999997431   233445555554      4677777664332  33345


Q ss_pred             hccccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          472 MKTFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       472 ~~~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++++.++++..      .+++.....++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus        85 ~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~Dfg~a  153 (318)
T 1fot_A           85 MDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFA  153 (318)
T ss_dssp             ECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECTTSCEEECCCSSC
T ss_pred             EeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChheEEEcCCCCEEEeecCcc
Confidence            66666666533      4678888999999999999999998   999999999999999999999999998

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.82  E-value=1.4e-20  Score=203.51  Aligned_cols=129  Identities=23%  Similarity=0.345  Sum_probs=93.9

Q ss_pred             hcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCCcccHHHHHHHHHh------cccc-ceec--chHHHHHHhhc
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQGLEEFKNEIET------SNSN-ATIG--ANVKAFVREMK  473 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~-~~~~--~~~~~~~~~~~  473 (626)
                      .++|.+.++||+|+||.||+|+. .+++.||||++......  .++..|++.      .+.+ .+..  ......+.+++
T Consensus         6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~--~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme   83 (483)
T 3sv0_A            6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH--PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD   83 (483)
T ss_dssp             TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS--CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc--HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence            46799999999999999999987 56899999998743322  123444333      1222 2211  11112223344


Q ss_pred             cccCCCc-------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEE---CCCCcEEEEecCcch
Q 006915          474 TFSDPTL-------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILL---DQEMNPKISDFGLAL  538 (626)
Q Consensus       474 ~~~~~~l-------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl---~~~~~~kl~DFGla~  538 (626)
                      ++ ++++       ...+++..++.|+.||+.||+|||+.+   |+||||||+||||   +.++.+||+|||++.
T Consensus        84 ~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDIKP~NILl~~~~~~~~vkL~DFGla~  154 (483)
T 3sv0_A           84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAK  154 (483)
T ss_dssp             CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTTCEEECCCTTCE
T ss_pred             CC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCcceEEEecCCCCCeEEEEeCCcce
Confidence            44 4443       234789999999999999999999998   9999999999999   688999999999983

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.82  E-value=1.5e-20  Score=198.88  Aligned_cols=120  Identities=27%  Similarity=0.292  Sum_probs=87.7

Q ss_pred             hcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCCcccHHHHHHHHHh--------------ccccceecchH---
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQGLEEFKNEIET--------------SNSNATIGANV---  465 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~~~~~~~~~e~~~--------------~~~~~~~~~~~---  465 (626)
                      .++|.+.+.||+|+||.||+|+. .+++.||||+++... ...+.+.+|+..              ++++++++...   
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~  114 (397)
T 1wak_A           36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE-HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG  114 (397)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred             CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCC-cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence            46799999999999999999986 458899999997532 334455555442              34666655432   


Q ss_pred             ---HHHHHhhccccCCCc-------ccCCCHHHHHHHHHHHHHHHHHHHhC-CCCceEecCCCCCCeEECCCC
Q 006915          466 ---KAFVREMKTFSDPTL-------SALLHWEMRFNIIIGIARGLLYLHQD-SRLRIIHRDLKTSNILLDQEM  527 (626)
Q Consensus       466 ---~~~~~~~~~~~~~~l-------~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~ivHrDlkp~NILl~~~~  527 (626)
                         ..++.+++++.+..+       ...+++..+..++.||+.||.|||++ +   |+||||||+||||+.++
T Consensus       115 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~g---ivHrDikp~NIll~~~~  184 (397)
T 1wak_A          115 VNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCR---IIHTDIKPENILLSVNE  184 (397)
T ss_dssp             TTEEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECCCCSGGGEEECCCH
T ss_pred             CCCceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHeeEeccc
Confidence               122233444422211       13478999999999999999999998 7   99999999999999775

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.82  E-value=7.6e-21  Score=191.01  Aligned_cols=131  Identities=30%  Similarity=0.462  Sum_probs=102.2

Q ss_pred             hcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCC---cccHHHHHHHHHh------ccccceecchHH--HHHHh
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSAS---GQGLEEFKNEIET------SNSNATIGANVK--AFVRE  471 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~---~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~  471 (626)
                      .++|.+.+.||+|+||.||+|+. .+++.||||.+....   ....+.+.+|+..      ++++++++....  .++..
T Consensus        10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   89 (278)
T 3cok_A           10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV   89 (278)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence            35789999999999999999987 468999999996432   2234667777664      666666654332  12233


Q ss_pred             hccccCCCcc-------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          472 MKTFSDPTLS-------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       472 ~~~~~~~~l~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++++.++++.       ..+++..+..++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus        90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~  159 (278)
T 3cok_A           90 LEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLA  159 (278)
T ss_dssp             EECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSSCCGGGEEECTTCCEEECCCTTC
T ss_pred             EecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEEeecce
Confidence            4444444332       34789999999999999999999998   999999999999999999999999987

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.82  E-value=5e-21  Score=193.63  Aligned_cols=131  Identities=27%  Similarity=0.349  Sum_probs=102.2

Q ss_pred             CccccccccccCeEEEEEEEcC-CCcEEEEEEecCC--CcccHHHHHHHHHh------ccccceecchHH------HHHH
Q 006915          406 NFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSA--SGQGLEEFKNEIET------SNSNATIGANVK------AFVR  470 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~--~~~~~~~~~~e~~~------~~~~~~~~~~~~------~~~~  470 (626)
                      .|.+.+.||+|+||.||+|... ++..||+|.+...  .....+.+.+|+..      +|++++++....      .++.
T Consensus        27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l  106 (290)
T 1t4h_A           27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL  106 (290)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred             eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence            4777889999999999999874 5889999998743  23345567777654      667776654321      2334


Q ss_pred             hhccccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEEC-CCCcEEEEecCcc
Q 006915          471 EMKTFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLD-QEMNPKISDFGLA  537 (626)
Q Consensus       471 ~~~~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~-~~~~~kl~DFGla  537 (626)
                      +++++.++++..      .+++..+..++.||+.||.|||+.+ .+|+||||||+|||++ .++.+||+|||++
T Consensus       107 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~  179 (290)
T 1t4h_A          107 VTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLA  179 (290)
T ss_dssp             EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCSCCCGGGEEESSTTSCEEECCTTGG
T ss_pred             EEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCC-CCEEECCCCHHHEEEECCCCCEEEeeCCCc
Confidence            566666666543      4678889999999999999999875 4599999999999997 7899999999988

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.82  E-value=6.3e-21  Score=198.29  Aligned_cols=131  Identities=26%  Similarity=0.287  Sum_probs=104.0

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHHHHh------ccccceecchHH--HHHHh
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNEIET------SNSNATIGANVK--AFVRE  471 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~  471 (626)
                      .++|++.+.||+|+||.||+++.. +++.||||++....   ....+.+.+|+..      ++++++.+....  .++.+
T Consensus        40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv  119 (350)
T 1rdq_E           40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV  119 (350)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence            357999999999999999999985 58999999997432   2345566677654      566666544322  23345


Q ss_pred             hccccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          472 MKTFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       472 ~~~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++++.++++..      .+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus       120 ~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFg~a  188 (350)
T 1rdq_E          120 MEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFA  188 (350)
T ss_dssp             EECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred             EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCccceEEECCCCCEEEcccccc
Confidence            66666666533      4678889999999999999999998   999999999999999999999999998

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.82  E-value=4.4e-21  Score=202.30  Aligned_cols=133  Identities=23%  Similarity=0.323  Sum_probs=99.1

Q ss_pred             HHhhcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCCcc--cHHHHHHHHHhccccceecchHHH----------
Q 006915          401 LAATDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQ--GLEEFKNEIETSNSNATIGANVKA----------  467 (626)
Q Consensus       401 ~~~~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~~----------  467 (626)
                      ....++|.+.+.||+|+||.||+|+. .+++.||||++......  .+.++.+.+.++|++++.+.....          
T Consensus         3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~   82 (383)
T 3eb0_A            3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQP   82 (383)
T ss_dssp             ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTSCCHHHHHHTTCCCTTBCCEEEEEEEC----------
T ss_pred             ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcchHHHHHHHHHHcCCCCccchhheeeecCccccccccc
Confidence            34567899999999999999999987 56899999998754322  233344455668888877653110          


Q ss_pred             ------------------------------HHHhhccccCCCc----------ccCCCHHHHHHHHHHHHHHHHHHHhCC
Q 006915          468 ------------------------------FVREMKTFSDPTL----------SALLHWEMRFNIIIGIARGLLYLHQDS  507 (626)
Q Consensus       468 ------------------------------~~~~~~~~~~~~l----------~~~l~~~~~~~i~~~ia~gL~yLH~~~  507 (626)
                                                    +..+++++.+ ++          ...+++..+..++.||+.||.|||+.+
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g  161 (383)
T 3eb0_A           83 PDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLG  161 (383)
T ss_dssp             ---------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             ccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCc
Confidence                                          1123444432 21          235788899999999999999999998


Q ss_pred             CCceEecCCCCCCeEEC-CCCcEEEEecCcc
Q 006915          508 RLRIIHRDLKTSNILLD-QEMNPKISDFGLA  537 (626)
Q Consensus       508 ~~~ivHrDlkp~NILl~-~~~~~kl~DFGla  537 (626)
                         |+||||||+|||++ .++.+||+|||+|
T Consensus       162 ---i~H~Dikp~Nil~~~~~~~~kl~Dfg~a  189 (383)
T 3eb0_A          162 ---ICHRDIKPQNLLVNSKDNTLKLCDFGSA  189 (383)
T ss_dssp             ---EECSCCCGGGEEEETTTTEEEECCCTTC
T ss_pred             ---CccCccCHHHEEEcCCCCcEEEEECCCC
Confidence               99999999999997 6889999999998

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.82  E-value=7.2e-21  Score=197.94  Aligned_cols=133  Identities=28%  Similarity=0.306  Sum_probs=103.5

Q ss_pred             hhcCccccccccccCeEEEEEEEcCC-CcEEEEEEecCC---CcccHHHHHHHHHh-------ccccceecchHH--HHH
Q 006915          403 ATDNFSEANKLGKGGFGPVYKAKFPG-GQQIAVKRLSSA---SGQGLEEFKNEIET-------SNSNATIGANVK--AFV  469 (626)
Q Consensus       403 ~~~~f~~~~~lG~G~fG~Vy~~~~~~-~~~vAvK~l~~~---~~~~~~~~~~e~~~-------~~~~~~~~~~~~--~~~  469 (626)
                      ..++|.+.+.||+|+||.||+|+... ++.||||+++..   .....+.+..|...       ++++.+.+....  .++
T Consensus        18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~   97 (353)
T 2i0e_A           18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY   97 (353)
T ss_dssp             -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred             chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence            34689999999999999999999864 889999999753   22344556666543       445555443221  334


Q ss_pred             HhhccccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcch
Q 006915          470 REMKTFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLAL  538 (626)
Q Consensus       470 ~~~~~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~  538 (626)
                      .+++++.++++.      ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||++.
T Consensus        98 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~  169 (353)
T 2i0e_A           98 FVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCK  169 (353)
T ss_dssp             EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred             EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEEcCCCcEEEEeCCccc
Confidence            556777776664      34778889999999999999999998   9999999999999999999999999983

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.82  E-value=1e-20  Score=196.29  Aligned_cols=131  Identities=22%  Similarity=0.276  Sum_probs=103.4

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHHHH-------hccccceecchHH--HHHHh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNEIE-------TSNSNATIGANVK--AFVRE  471 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e~~-------~~~~~~~~~~~~~--~~~~~  471 (626)
                      ++|++.+.||+|+||.||+|+.. +++.||||+++...   ......+.+|..       +++++++.+....  .++.+
T Consensus         9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv   88 (345)
T 3a8x_A            9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV   88 (345)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence            57889999999999999999985 58999999997542   222334444433       4677777665432  33455


Q ss_pred             hccccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcch
Q 006915          472 MKTFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLAL  538 (626)
Q Consensus       472 ~~~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~  538 (626)
                      ++++.++++.      ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++
T Consensus        89 ~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFG~a~  158 (345)
T 3a8x_A           89 IEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK  158 (345)
T ss_dssp             ECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCGGGCB
T ss_pred             EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEEeccccc
Confidence            6666666653      34788899999999999999999998   9999999999999999999999999983

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.82  E-value=2.2e-20  Score=190.27  Aligned_cols=131  Identities=24%  Similarity=0.286  Sum_probs=102.0

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC----cccHHHHHHHHHh------ccccceecchHH----HH
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS----GQGLEEFKNEIET------SNSNATIGANVK----AF  468 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~----~~~~~~~~~e~~~------~~~~~~~~~~~~----~~  468 (626)
                      .++|.+.+.||+|+||.||++... +++.||||.+....    ......+.+|++.      ++++++++....    .+
T Consensus         4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   83 (305)
T 2wtk_C            4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM   83 (305)
T ss_dssp             -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred             ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence            468999999999999999999984 58899999997432    2345667777764      677777765421    22


Q ss_pred             HHhhccccCC-------CcccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          469 VREMKTFSDP-------TLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       469 ~~~~~~~~~~-------~l~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +.+++++.++       .....+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus        84 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~NIl~~~~~~~kl~dfg~~  156 (305)
T 2wtk_C           84 YMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVA  156 (305)
T ss_dssp             EEEEECCSEEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred             EEEehhccCCHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEcCCCcEEeeccccc
Confidence            2334444322       11234788999999999999999999998   999999999999999999999999998

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.82  E-value=2.1e-21  Score=201.34  Aligned_cols=134  Identities=29%  Similarity=0.360  Sum_probs=104.6

Q ss_pred             HhhcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHHH-------HhccccceecchHH--HH
Q 006915          402 AATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNEI-------ETSNSNATIGANVK--AF  468 (626)
Q Consensus       402 ~~~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e~-------~~~~~~~~~~~~~~--~~  468 (626)
                      ...++|.+.+.||+|+||.||+|+.. +++.||||+++...   ......+..|.       .+++++++.+....  .+
T Consensus        14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~   93 (345)
T 1xjd_A           14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL   93 (345)
T ss_dssp             --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred             CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence            34678999999999999999999985 58999999997531   22333344443       45777777654332  33


Q ss_pred             HHhhccccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcch
Q 006915          469 VREMKTFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLAL  538 (626)
Q Consensus       469 ~~~~~~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~  538 (626)
                      +.+++++.++++.      ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++
T Consensus        94 ~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~  166 (345)
T 1xjd_A           94 FFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCK  166 (345)
T ss_dssp             EEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCChhhEEECCCCCEEEeEChhhh
Confidence            4556777676664      34778899999999999999999998   9999999999999999999999999983

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.82  E-value=4.4e-21  Score=201.49  Aligned_cols=130  Identities=25%  Similarity=0.308  Sum_probs=103.7

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCC---CcccHHHHHHHHHh------ccccceecchHH--HHHHhh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSA---SGQGLEEFKNEIET------SNSNATIGANVK--AFVREM  472 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~---~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~  472 (626)
                      ++|.+.+.||+|+||.||+++.. +++.||||.+...   .......+.+|+..      ++++.+++....  .++.++
T Consensus        15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~   94 (384)
T 4fr4_A           15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV   94 (384)
T ss_dssp             GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence            57899999999999999999875 5889999998742   22344566666654      677777654332  233455


Q ss_pred             ccccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          473 KTFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       473 ~~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +++.++++.      ..+++..+..++.||+.||.|||+.+   |+||||||+||||+.++.+||+|||++
T Consensus        95 e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a  162 (384)
T 4fr4_A           95 DLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIA  162 (384)
T ss_dssp             CCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred             ecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEECCCCCEEEecccee
Confidence            666665553      24788999999999999999999998   999999999999999999999999998

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.82  E-value=2.3e-21  Score=207.06  Aligned_cols=139  Identities=22%  Similarity=0.274  Sum_probs=108.7

Q ss_pred             CHHHHHHhhcCccccccccccCeEEEEEEEcCC-CcEEEEEEecCCC---cccHHHHHHH------HHhccccceecchH
Q 006915          396 DFESILAATDNFSEANKLGKGGFGPVYKAKFPG-GQQIAVKRLSSAS---GQGLEEFKNE------IETSNSNATIGANV  465 (626)
Q Consensus       396 ~~~~l~~~~~~f~~~~~lG~G~fG~Vy~~~~~~-~~~vAvK~l~~~~---~~~~~~~~~e------~~~~~~~~~~~~~~  465 (626)
                      .+.++...+++|++.+.||+|+||+||+|++.. ++.||||++++..   ......+.+|      +.+++++.+.+.+.
T Consensus        65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~  144 (437)
T 4aw2_A           65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ  144 (437)
T ss_dssp             HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred             hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence            455666678899999999999999999999854 8899999996421   1111223334      34577887776543


Q ss_pred             H--HHHHhhccccCCCcc-------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCc
Q 006915          466 K--AFVREMKTFSDPTLS-------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGL  536 (626)
Q Consensus       466 ~--~~~~~~~~~~~~~l~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl  536 (626)
                      .  .++.+++++.++++.       ..+++..+..++.||+.||.|||+.+   |+||||||+||||+.++.+||+|||+
T Consensus       145 ~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILl~~~g~vkL~DFGl  221 (437)
T 4aw2_A          145 DDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFGS  221 (437)
T ss_dssp             CSSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTT
T ss_pred             eCCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeeEcCCCCEEEcchhh
Confidence            3  334556777666653       35788899999999999999999998   99999999999999999999999999


Q ss_pred             c
Q 006915          537 A  537 (626)
Q Consensus       537 a  537 (626)
                      |
T Consensus       222 a  222 (437)
T 4aw2_A          222 C  222 (437)
T ss_dssp             C
T ss_pred             h
Confidence            8

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.82  E-value=7.7e-21  Score=193.10  Aligned_cols=131  Identities=31%  Similarity=0.472  Sum_probs=102.8

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH----------
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK----------  466 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~----------  466 (626)
                      .++|++.+.||+|+||.||+|+.. +++.||||.+... ....+.+.+|+..      ++++++.+....          
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~   83 (303)
T 1zy4_A            5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA   83 (303)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred             cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence            457899999999999999999974 6899999999642 2345667777664      667766654321          


Q ss_pred             -----HHHHhhccccCCCcccC-------CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEec
Q 006915          467 -----AFVREMKTFSDPTLSAL-------LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDF  534 (626)
Q Consensus       467 -----~~~~~~~~~~~~~l~~~-------l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DF  534 (626)
                           .++.+++++.++++..+       +++..++.++.||+.||+|||+++   |+||||||+|||++.++.+||+||
T Consensus        84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dlkp~Nil~~~~~~~kl~df  160 (303)
T 1zy4_A           84 VKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDF  160 (303)
T ss_dssp             --CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCC
T ss_pred             cccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCC---eecccCCHHhEEEcCCCCEEEeeC
Confidence                 12234566666665443       457788899999999999999998   999999999999999999999999


Q ss_pred             Ccch
Q 006915          535 GLAL  538 (626)
Q Consensus       535 Gla~  538 (626)
                      |++.
T Consensus       161 g~~~  164 (303)
T 1zy4_A          161 GLAK  164 (303)
T ss_dssp             CCCS
T ss_pred             cchh
Confidence            9874

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.82  E-value=2.2e-21  Score=205.66  Aligned_cols=138  Identities=20%  Similarity=0.219  Sum_probs=107.5

Q ss_pred             HHHHHHhhcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHH------HHHhccccceecchHH
Q 006915          397 FESILAATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKN------EIETSNSNATIGANVK  466 (626)
Q Consensus       397 ~~~l~~~~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~------e~~~~~~~~~~~~~~~  466 (626)
                      +.++....++|.+.+.||+|+||.||+|+.. +++.||||++++..   ......+.+      .+.+++++++.+....
T Consensus        61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~  140 (410)
T 3v8s_A           61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD  140 (410)
T ss_dssp             HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence            3455566789999999999999999999985 58999999986421   111122333      3445788888765433


Q ss_pred             --HHHHhhccccCCCccc-----CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          467 --AFVREMKTFSDPTLSA-----LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       467 --~~~~~~~~~~~~~l~~-----~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                        .++.+++++.++++..     .+++.....++.||+.||+|||+.+   |+||||||+||||+.++.+||+|||++
T Consensus       141 ~~~~~lV~E~~~gg~L~~~l~~~~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFG~a  215 (410)
T 3v8s_A          141 DRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTC  215 (410)
T ss_dssp             SSEEEEEECCCTTEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred             CCEEEEEEeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeeECCCCCEEEecccee
Confidence              3345566666666543     3678888999999999999999998   999999999999999999999999998

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.82  E-value=1.5e-20  Score=196.86  Aligned_cols=131  Identities=21%  Similarity=0.224  Sum_probs=100.2

Q ss_pred             HhhcCccccccccccCeEEEEEEE------cCCCcEEEEEEecCCCcccHHHHHHHHH---------hccccceecchHH
Q 006915          402 AATDNFSEANKLGKGGFGPVYKAK------FPGGQQIAVKRLSSASGQGLEEFKNEIE---------TSNSNATIGANVK  466 (626)
Q Consensus       402 ~~~~~f~~~~~lG~G~fG~Vy~~~------~~~~~~vAvK~l~~~~~~~~~~~~~e~~---------~~~~~~~~~~~~~  466 (626)
                      ...++|.+.+.||+|+||.||+|.      ...++.||||++....   ..++..|++         +++++.+.+.+..
T Consensus        62 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~  138 (365)
T 3e7e_A           62 LGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLF  138 (365)
T ss_dssp             CSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC
T ss_pred             ECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeec
Confidence            345779999999999999999994      3458899999997643   334444433         2455555544322


Q ss_pred             --HHHHhhccccCCCcc-----------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECC--------
Q 006915          467 --AFVREMKTFSDPTLS-----------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQ--------  525 (626)
Q Consensus       467 --~~~~~~~~~~~~~l~-----------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~--------  525 (626)
                        ..+.+++++.++++.           ..+++..++.|+.||+.||+|||+.+   |+||||||+||||+.        
T Consensus       139 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~---ivHrDiKp~NIll~~~~~~~~~~  215 (365)
T 3e7e_A          139 QNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE---IIHGDIKPDNFILGNGFLEQDDE  215 (365)
T ss_dssp             SSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECGGGTCC---
T ss_pred             CCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEecccccCcccc
Confidence              233456666666543           34788999999999999999999998   999999999999998        


Q ss_pred             ---CCcEEEEecCcch
Q 006915          526 ---EMNPKISDFGLAL  538 (626)
Q Consensus       526 ---~~~~kl~DFGla~  538 (626)
                         ++.+||+|||+|.
T Consensus       216 ~~~~~~~kl~DFG~a~  231 (365)
T 3e7e_A          216 DDLSAGLALIDLGQSI  231 (365)
T ss_dssp             ---CTTEEECCCTTCE
T ss_pred             ccccCCEEEeeCchhh
Confidence               8999999999993

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.82  E-value=1.9e-20  Score=200.55  Aligned_cols=131  Identities=27%  Similarity=0.379  Sum_probs=102.0

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCC--CcccHHHHHHHHHh------ccccceecchHH-------H
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSA--SGQGLEEFKNEIET------SNSNATIGANVK-------A  467 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~--~~~~~~~~~~e~~~------~~~~~~~~~~~~-------~  467 (626)
                      .++|.+.+.||+|+||.||+|+.. +++.||||++...  .....+.+.+|++.      +|++.+++....       .
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~  104 (432)
T 3n9x_A           25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE  104 (432)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence            468999999999999999999874 5889999999753  22334566677654      677777654332       1


Q ss_pred             HHHhhccccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcch
Q 006915          468 FVREMKTFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLAL  538 (626)
Q Consensus       468 ~~~~~~~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~  538 (626)
                      ++.+++++. +++.      ..+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||+|+
T Consensus       105 ~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~g---ivHrDlkp~NILl~~~~~~kL~DFGla~  177 (432)
T 3n9x_A          105 LYIVLEIAD-SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLAR  177 (432)
T ss_dssp             EEEEEECCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             EEEEEecCC-cCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCHHHeEECCCCCEEEccCCCcc
Confidence            223344332 2332      34789999999999999999999998   9999999999999999999999999984

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.82  E-value=6.2e-21  Score=202.13  Aligned_cols=129  Identities=22%  Similarity=0.315  Sum_probs=97.7

Q ss_pred             cCcccc-ccccccCeEEEEEEEcC-CCcEEEEEEecCCCcccHHHHH---HHHHhccccceecchHH------HHHHhhc
Q 006915          405 DNFSEA-NKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQGLEEFK---NEIETSNSNATIGANVK------AFVREMK  473 (626)
Q Consensus       405 ~~f~~~-~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~---~e~~~~~~~~~~~~~~~------~~~~~~~  473 (626)
                      ++|.+. +.||+|+||.||+++.. +++.||||+++... ....++.   +...++|++++++....      .++.+++
T Consensus        61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E  139 (400)
T 1nxk_A           61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCP-KARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVME  139 (400)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSH-HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred             ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcch-hHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEE
Confidence            456665 68999999999999875 58999999997432 1112221   22234788887764321      2344566


Q ss_pred             cccCCCcc--------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECC---CCcEEEEecCcc
Q 006915          474 TFSDPTLS--------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQ---EMNPKISDFGLA  537 (626)
Q Consensus       474 ~~~~~~l~--------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~---~~~~kl~DFGla  537 (626)
                      ++.++++.        ..+++..+..|+.||+.||.|||+.+   |+||||||+|||++.   ++.+||+|||++
T Consensus       140 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~~~kl~DFG~a  211 (400)
T 1nxk_A          140 CLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFA  211 (400)
T ss_dssp             CCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSTTCCEEECCCTTC
T ss_pred             eCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCcceEEEecCCCCccEEEEecccc
Confidence            66665552        24789999999999999999999998   999999999999997   788999999998

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.82  E-value=3.8e-21  Score=216.02  Aligned_cols=184  Identities=21%  Similarity=0.268  Sum_probs=137.5

Q ss_pred             HHHhhcCccccccccccCeEEEEEEEcCC----CcEEEEEEecCCC-cccHHHHHHHHH------hccccceecchHH-H
Q 006915          400 ILAATDNFSEANKLGKGGFGPVYKAKFPG----GQQIAVKRLSSAS-GQGLEEFKNEIE------TSNSNATIGANVK-A  467 (626)
Q Consensus       400 l~~~~~~f~~~~~lG~G~fG~Vy~~~~~~----~~~vAvK~l~~~~-~~~~~~~~~e~~------~~~~~~~~~~~~~-~  467 (626)
                      .....++|.+.+.||+|+||.||+|++..    +..||||.++... ....+.|.+|+.      ++|++++++.+.. .
T Consensus       385 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~  464 (656)
T 2j0j_A          385 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP  464 (656)
T ss_dssp             TBCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             cccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCc
Confidence            33445779999999999999999998742    5679999987543 233456777765      4788888876533 2


Q ss_pred             HHHhhccccCCCccc-------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhc
Q 006915          468 FVREMKTFSDPTLSA-------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM  540 (626)
Q Consensus       468 ~~~~~~~~~~~~l~~-------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~  540 (626)
                      ++.+++++.++++..       .+++..++.++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++..+
T Consensus       465 ~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDikp~NILl~~~~~vkL~DFG~a~~~  541 (656)
T 2j0j_A          465 VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYM  541 (656)
T ss_dssp             CEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCCCCSC
T ss_pred             eEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchHhEEEeCCCCEEEEecCCCeec
Confidence            334566666666543       3678899999999999999999998   999999999999999999999999998221


Q ss_pred             cc---------------------------------------------cccC------------------CCCChHHHHHH
Q 006915          541 MD---------------------------------------------QKLH------------------ASSKPNEILKC  557 (626)
Q Consensus       541 ~~---------------------------------------------~~~~------------------~~~~~~~~~~~  557 (626)
                      .+                                             ...+                  ...+......+
T Consensus       542 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l  621 (656)
T 2j0j_A          542 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTL  621 (656)
T ss_dssp             CC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTCCCCCCTTCCHHH
T ss_pred             CCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCccccHHH
Confidence            10                                             0000                  00111122457


Q ss_pred             HHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 006915          558 INVGLLCVQEDPNDRPTMSDVVIMLGSEA  586 (626)
Q Consensus       558 ~~~~~~C~~~~p~~RPs~~~vl~~L~~~~  586 (626)
                      .+++..||+.||.+||++.+++..|..+.
T Consensus       622 ~~li~~~l~~dP~~RPs~~el~~~L~~il  650 (656)
T 2j0j_A          622 YSLMTKCWAYDPSRRPRFTELKAQLSTIL  650 (656)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence            78888999999999999999999998764

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.82  E-value=5.4e-21  Score=196.49  Aligned_cols=131  Identities=30%  Similarity=0.340  Sum_probs=103.0

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCc------ccHHHHHHHHHh------ccccceecchHH--HH
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASG------QGLEEFKNEIET------SNSNATIGANVK--AF  468 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~------~~~~~~~~e~~~------~~~~~~~~~~~~--~~  468 (626)
                      .+.|.+.+.||+|+||.||+|+.. +++.||||.+.....      ...+++.+|+..      ++++.+.+....  .+
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   90 (321)
T 2a2a_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV   90 (321)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence            356889999999999999999985 589999999975322      135667777654      677776654332  23


Q ss_pred             HHhhccccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCC----cEEEEecCcc
Q 006915          469 VREMKTFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEM----NPKISDFGLA  537 (626)
Q Consensus       469 ~~~~~~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~----~~kl~DFGla  537 (626)
                      +.+++++.++++..      .+++..+..++.||+.||.|||+.+   |+||||||+|||++.++    .+||+|||++
T Consensus        91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~---ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~  166 (321)
T 2a2a_A           91 VLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLA  166 (321)
T ss_dssp             EEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECCCTTC
T ss_pred             EEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChHHEEEecCCCCcCCEEEccCccc
Confidence            34456665555543      3678899999999999999999998   99999999999999888    7999999998

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.82  E-value=5.3e-21  Score=203.98  Aligned_cols=132  Identities=24%  Similarity=0.280  Sum_probs=100.8

Q ss_pred             hhcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC--------cccHHHHHHHHH------hccccceecchHH-
Q 006915          403 ATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS--------GQGLEEFKNEIE------TSNSNATIGANVK-  466 (626)
Q Consensus       403 ~~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~--------~~~~~~~~~e~~------~~~~~~~~~~~~~-  466 (626)
                      ..++|.+.+.||+|+||.||+|... +++.||||++....        ......+.+|+.      ++|++++.+.... 
T Consensus       133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~  212 (419)
T 3i6u_A          133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE  212 (419)
T ss_dssp             HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEESS
T ss_pred             hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEecC
Confidence            4678999999999999999999874 58999999987431        111123445544      5778777665322 


Q ss_pred             HHHHhhccccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCC---CcEEEEecCcc
Q 006915          467 AFVREMKTFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQE---MNPKISDFGLA  537 (626)
Q Consensus       467 ~~~~~~~~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~---~~~kl~DFGla  537 (626)
                      .++.+++++.++++..      .+++..+..++.||+.||+|||+.+   |+||||||+|||++.+   ..+||+|||++
T Consensus       213 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kl~DFG~a  289 (419)
T 3i6u_A          213 DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHS  289 (419)
T ss_dssp             EEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSSSCCEEECCSSTT
T ss_pred             ceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCCCcceEEEeecccc
Confidence            2335567776666644      3678999999999999999999998   9999999999999654   45999999998

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.82  E-value=1.2e-20  Score=197.14  Aligned_cols=131  Identities=26%  Similarity=0.387  Sum_probs=104.9

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC-cccHHHHHHHHHh------ccccceecchHH--HHHHhhc
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS-GQGLEEFKNEIET------SNSNATIGANVK--AFVREMK  473 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~  473 (626)
                      .++|.+.+.||+|+||.||+++.. +++.||+|.+.... ....+.+.+|+..      ++++++++....  .++.+++
T Consensus        32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  111 (360)
T 3eqc_A           32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME  111 (360)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence            357899999999999999999985 68999999997542 3345667788765      566766654332  2334566


Q ss_pred             cccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhC-CCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          474 TFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQD-SRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       474 ~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~-~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++.++++..      .+++..+..++.|++.||.|||+. +   |+||||||+|||++.++.+||+|||++
T Consensus       112 ~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~  179 (360)
T 3eqc_A          112 HMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVS  179 (360)
T ss_dssp             CCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHC---CCCSCCSGGGEEECTTCCEEECCCCCC
T ss_pred             CCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhCC---EEcCCccHHHEEECCCCCEEEEECCCC
Confidence            666666543      467888899999999999999985 6   999999999999999999999999988

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.82  E-value=1.1e-20  Score=191.41  Aligned_cols=129  Identities=29%  Similarity=0.366  Sum_probs=97.0

Q ss_pred             CccccccccccCeEEEEEEEc-CCCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH--HHHHhhcccc
Q 006915          406 NFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK--AFVREMKTFS  476 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~~~  476 (626)
                      .|.....||+|+||.||+|+. .+++.||||.+........+.+.+|+..      ++++++++....  .++..++++.
T Consensus        23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~  102 (295)
T 2clq_A           23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP  102 (295)
T ss_dssp             TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred             CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence            344456899999999999987 4688999999987655556677777654      677777664432  1223344444


Q ss_pred             CCCccc---------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECC-CCcEEEEecCcc
Q 006915          477 DPTLSA---------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQ-EMNPKISDFGLA  537 (626)
Q Consensus       477 ~~~l~~---------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~-~~~~kl~DFGla  537 (626)
                      ++++..         .+++..+..++.||+.||.|||+.+   |+||||||+|||++. ++.+||+|||++
T Consensus       103 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~kl~Dfg~~  170 (295)
T 2clq_A          103 GGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLINTYSGVLKISDFGTS  170 (295)
T ss_dssp             EEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTCCEEECCTTTC
T ss_pred             CCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCC---EEccCCChhhEEEECCCCCEEEeecccc
Confidence            443322         3457788889999999999999998   999999999999987 899999999988

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.82  E-value=9.6e-21  Score=197.16  Aligned_cols=131  Identities=25%  Similarity=0.404  Sum_probs=100.2

Q ss_pred             hcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCC--cccHHHHHHHHH------hccccceecchHHH-------
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSAS--GQGLEEFKNEIE------TSNSNATIGANVKA-------  467 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~--~~~~~~~~~e~~------~~~~~~~~~~~~~~-------  467 (626)
                      .++|.+.+.||+|+||.||+|+. .+++.||||++....  ......+.+|+.      +++++++++.+...       
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   95 (351)
T 3mi9_A           16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   95 (351)
T ss_dssp             GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred             ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence            35799999999999999999998 468999999986432  222344555554      47777777654321       


Q ss_pred             ---HHHhhccccCC------CcccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          468 ---FVREMKTFSDP------TLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       468 ---~~~~~~~~~~~------~l~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                         ++.+++++.+.      .....+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus        96 ~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~a  171 (351)
T 3mi9_A           96 KGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLA  171 (351)
T ss_dssp             -CEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred             CceEEEEEeccCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCCEEEccchhc
Confidence               12334444321      11134789999999999999999999998   999999999999999999999999987

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.82  E-value=6e-21  Score=199.07  Aligned_cols=131  Identities=25%  Similarity=0.266  Sum_probs=102.7

Q ss_pred             hcCccccccccccCeEEEEEEEc----CCCcEEEEEEecCCC----------cccHHHHHHHH-HhccccceecchHH--
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKF----PGGQQIAVKRLSSAS----------GQGLEEFKNEI-ETSNSNATIGANVK--  466 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~----~~~~~vAvK~l~~~~----------~~~~~~~~~e~-~~~~~~~~~~~~~~--  466 (626)
                      .++|.+.+.||+|+||.||+++.    .+++.||||+++...          ...+.+....+ .+++++.+.+....  
T Consensus        53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~  132 (355)
T 1vzo_A           53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET  132 (355)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred             ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence            35799999999999999999987    368999999986421          11233444455 36778777664432  


Q ss_pred             HHHHhhccccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          467 AFVREMKTFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       467 ~~~~~~~~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      .++.+++++.++++..      .+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus       133 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DfG~a  206 (355)
T 1vzo_A          133 KLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLS  206 (355)
T ss_dssp             EEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEESCSSEE
T ss_pred             eEEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCcEEEeeCCCC
Confidence            2334566666666533      4678889999999999999999998   999999999999999999999999988

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.82  E-value=2.1e-20  Score=195.60  Aligned_cols=137  Identities=23%  Similarity=0.328  Sum_probs=105.8

Q ss_pred             HHHHHhhcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCcc--------cHHHHHHHH-------Hhcccccee
Q 006915          398 ESILAATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQ--------GLEEFKNEI-------ETSNSNATI  461 (626)
Q Consensus       398 ~~l~~~~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~--------~~~~~~~e~-------~~~~~~~~~  461 (626)
                      .......++|.+.+.||+|+||.||+|++. +|+.||||++......        ..+.+.+|+       .+++++.+.
T Consensus        87 ~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~  166 (365)
T 2y7j_A           87 AAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLI  166 (365)
T ss_dssp             HHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEE
T ss_pred             hhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEE
Confidence            334455678999999999999999999985 6999999998754311        123344443       356777776


Q ss_pred             cchHH--HHHHhhccccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEe
Q 006915          462 GANVK--AFVREMKTFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISD  533 (626)
Q Consensus       462 ~~~~~--~~~~~~~~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~D  533 (626)
                      +....  .++.+++++.++++..      .+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|
T Consensus       167 ~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~g---i~H~Dlkp~NIl~~~~~~ikl~D  243 (365)
T 2y7j_A          167 DSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSD  243 (365)
T ss_dssp             EEEEBSSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECC
T ss_pred             EEEeeCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEEEe
Confidence            54332  2334566666665533      4788899999999999999999998   99999999999999999999999


Q ss_pred             cCcc
Q 006915          534 FGLA  537 (626)
Q Consensus       534 FGla  537 (626)
                      ||++
T Consensus       244 fG~~  247 (365)
T 2y7j_A          244 FGFS  247 (365)
T ss_dssp             CTTC
T ss_pred             cCcc
Confidence            9987

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.82  E-value=1.6e-20  Score=193.22  Aligned_cols=129  Identities=23%  Similarity=0.423  Sum_probs=97.4

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCcc-------cHHHHHHHHHhccccceecchHH--HHHHhhcc
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQ-------GLEEFKNEIETSNSNATIGANVK--AFVREMKT  474 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~-------~~~~~~~e~~~~~~~~~~~~~~~--~~~~~~~~  474 (626)
                      ++|.+.+.||+|+||.||+|+.. +++.||||++......       .+.++...+.++|++.+.+....  .++.++++
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   81 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence            57899999999999999999985 6899999998743211       12233334455777777765432  12233444


Q ss_pred             ccCCCc-------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          475 FSDPTL-------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       475 ~~~~~l-------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +. +++       ...+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus        82 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a  147 (324)
T 3mtl_A           82 LD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQK---VLHRDLKPQNLLINERGELKLADFGLA  147 (324)
T ss_dssp             CS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCCGGGEEECTTCCEEECSSSEE
T ss_pred             cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCcCHHHEEECCCCCEEEccCccc
Confidence            33 222       234788899999999999999999998   999999999999999999999999987

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.82  E-value=1.5e-20  Score=191.65  Aligned_cols=131  Identities=26%  Similarity=0.362  Sum_probs=100.3

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH--HHHHhhcc
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK--AFVREMKT  474 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~  474 (626)
                      .++|.+.+.||+|+||.||+++.. +++.||||.+..........+.+|+..      ++++++.+....  .++..+++
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   87 (304)
T 2jam_A            8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL   87 (304)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence            357889999999999999999875 689999999986544444556666553      677776654322  22344555


Q ss_pred             ccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEE---CCCCcEEEEecCcc
Q 006915          475 FSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILL---DQEMNPKISDFGLA  537 (626)
Q Consensus       475 ~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl---~~~~~~kl~DFGla  537 (626)
                      +.++++.      ..+++.....++.|++.||.|||+.+   |+||||||+|||+   ++++.+||+|||++
T Consensus        88 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~  156 (304)
T 2jam_A           88 VSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLS  156 (304)
T ss_dssp             CCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCSCCGGGCEESSSSTTCCEEBCSCSTT
T ss_pred             CCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEecCCCCCCEEEccCCcc
Confidence            5555553      34678899999999999999999998   9999999999999   78899999999987

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.82  E-value=2e-20  Score=196.00  Aligned_cols=130  Identities=27%  Similarity=0.391  Sum_probs=94.0

Q ss_pred             hcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCC--CcccHHHHHHHHHh------ccccceecchHH--------
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSA--SGQGLEEFKNEIET------SNSNATIGANVK--------  466 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~--~~~~~~~~~~e~~~------~~~~~~~~~~~~--------  466 (626)
                      .++|.+.+.||+|+||.||+|+. .+++.||||++...  .....+.+.+|++.      +|++.+.+....        
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  103 (367)
T 1cm8_A           24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT  103 (367)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence            46799999999999999999987 46899999999643  22234556666654      667766654322        


Q ss_pred             HHHHhhccccCCCcc-----cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          467 AFVREMKTFSDPTLS-----ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       467 ~~~~~~~~~~~~~l~-----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      .++.+++++ +.++.     ..+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus       104 ~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a  175 (367)
T 1cm8_A          104 DFYLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLA  175 (367)
T ss_dssp             CCEEEEECC-SEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred             eEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCHHHEEEcCCCCEEEEeeecc
Confidence            112333333 33332     34778889999999999999999998   999999999999999999999999998

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.82  E-value=4.1e-21  Score=194.00  Aligned_cols=179  Identities=9%  Similarity=-0.027  Sum_probs=131.4

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCc---ccHHHHHHHHHh------ccccceecchHH--HHHHhh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASG---QGLEEFKNEIET------SNSNATIGANVK--AFVREM  472 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~  472 (626)
                      ++|.+.+.||+|+||.||+|+.. +++.||||.+.....   ...+.|.+|+..      +|++++++....  .++.++
T Consensus        31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  110 (286)
T 3uqc_A           31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA  110 (286)
T ss_dssp             TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence            57999999999999999999985 489999999985432   223566666553      677777654332  233455


Q ss_pred             ccccCCCcccC----CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcch----------
Q 006915          473 KTFSDPTLSAL----LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLAL----------  538 (626)
Q Consensus       473 ~~~~~~~l~~~----l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~----------  538 (626)
                      +++.++++..+    ....+..+|+.||+.||+|||+.+   |+||||||+|||++.++.+||+++|...          
T Consensus       111 e~~~g~~L~~~l~~~~~~~~~~~i~~ql~~aL~~lH~~g---ivH~Dikp~NIll~~~g~~kl~~~~~~~~~~~~~Di~s  187 (286)
T 3uqc_A          111 EWIRGGSLQEVADTSPSPVGAIRAMQSLAAAADAAHRAG---VALSIDHPSRVRVSIDGDVVLAYPATMPDANPQDDIRG  187 (286)
T ss_dssp             ECCCEEEHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEETTSCEEECSCCCCTTCCHHHHHHH
T ss_pred             EecCCCCHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCC---CccCCCCcccEEEcCCCCEEEEeccccCCCCchhHHHH
Confidence            66655555433    345567889999999999999998   9999999999999999999999887650          


Q ss_pred             ------hccccc------------------cCCCCC------hHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccc
Q 006915          539 ------DMMDQK------------------LHASSK------PNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAM  587 (626)
Q Consensus       539 ------~~~~~~------------------~~~~~~------~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~~  587 (626)
                            +++...                  ......      ......+.+++..||+.||.+| |+.++++.|.....
T Consensus       188 lG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~  265 (286)
T 3uqc_A          188 IGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATA  265 (286)
T ss_dssp             HHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhc
Confidence                  111000                  011101      1223467888899999999999 99999999988643

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.82  E-value=3.7e-21  Score=200.45  Aligned_cols=183  Identities=14%  Similarity=0.160  Sum_probs=127.1

Q ss_pred             hcCccccccccccCeEEEEEEEcCC---------CcEEEEEEecCCCc-ccHHHHHHHHHhcccccee------------
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFPG---------GQQIAVKRLSSASG-QGLEEFKNEIETSNSNATI------------  461 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~~---------~~~vAvK~l~~~~~-~~~~~~~~e~~~~~~~~~~------------  461 (626)
                      .++|.+.+.||+|+||.||+|+...         ++.||||.+..... ..+.++...+.++|+++++            
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~  120 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIP  120 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETTSTHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCC
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEecccchHHHHHHHHHHhcccchhhhhhhhccCCccCcc
Confidence            3679999999999999999998853         78999999975421 1222334444445544421            


Q ss_pred             ---cchH---HHHHHhhccccCCCcc--------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCC
Q 006915          462 ---GANV---KAFVREMKTFSDPTLS--------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEM  527 (626)
Q Consensus       462 ---~~~~---~~~~~~~~~~~~~~l~--------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~  527 (626)
                         +...   ..++.+++++ ++++.        ..+++..++.++.||+.||.|||+.+   |+||||||+|||++.++
T Consensus       121 ~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIl~~~~~  196 (352)
T 2jii_A          121 TCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENE---YVHGNVTAENIFVDPED  196 (352)
T ss_dssp             CCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCGGGEEEETTE
T ss_pred             chhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEEEcCCC
Confidence               1111   1122334444 44443        45789999999999999999999998   99999999999999998


Q ss_pred             --cEEEEecCcchhccccc--------------------------------------------------cCCC-C--ChH
Q 006915          528 --NPKISDFGLALDMMDQK--------------------------------------------------LHAS-S--KPN  552 (626)
Q Consensus       528 --~~kl~DFGla~~~~~~~--------------------------------------------------~~~~-~--~~~  552 (626)
                        .+||+|||++..+....                                                  .... .  ...
T Consensus       197 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~  276 (352)
T 2jii_A          197 QSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTE  276 (352)
T ss_dssp             EEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHH
T ss_pred             CceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHH
Confidence              89999999983221100                                                  0000 0  000


Q ss_pred             -------------------------HHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccccCC
Q 006915          553 -------------------------EILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLA  590 (626)
Q Consensus       553 -------------------------~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~~~~~  590 (626)
                                               ....+.+++..|++.||.+||++.++++.|+.+.....
T Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~  339 (352)
T 2jii_A          277 DIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLR  339 (352)
T ss_dssp             HHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcC
Confidence                                     12457778889999999999999999999998765543

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.82  E-value=1.7e-21  Score=199.87  Aligned_cols=192  Identities=23%  Similarity=0.366  Sum_probs=125.5

Q ss_pred             HHHhhcCccccccccccCeEEEEEEEcCCCcEEEEEEecCCC--cccHHHHHHHHH------hccccceecchHH--HHH
Q 006915          400 ILAATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSAS--GQGLEEFKNEIE------TSNSNATIGANVK--AFV  469 (626)
Q Consensus       400 l~~~~~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~--~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~  469 (626)
                      .....++|.+.+.||+|+||.||+|+...  .||||.++...  ....+.+.+|+.      +++++++++.+..  .++
T Consensus        28 ~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~  105 (319)
T 2y4i_B           28 WDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLA  105 (319)
T ss_dssp             SSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEE
T ss_pred             ccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceE
Confidence            33446789999999999999999998854  49999987432  222233444443      4667776654432  222


Q ss_pred             HhhccccCCCcc-------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhc--
Q 006915          470 REMKTFSDPTLS-------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM--  540 (626)
Q Consensus       470 ~~~~~~~~~~l~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~--  540 (626)
                      ..++++.++++.       ..+++..++.++.||+.||+|||+.+   |+||||||+|||++ ++.+||+|||++...  
T Consensus       106 iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~  181 (319)
T 2y4i_B          106 IITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYD-NGKVVITDFGLFSISGV  181 (319)
T ss_dssp             EECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTT---CCCCCCCSTTEEEC---CCEECCCSCCC----
T ss_pred             EEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChhhEEEe-CCCEEEeecCCcccccc
Confidence            344554444432       24778999999999999999999998   99999999999998 679999999985211  


Q ss_pred             -------------------cccccCC-------------------------------------CCCh-------------
Q 006915          541 -------------------MDQKLHA-------------------------------------SSKP-------------  551 (626)
Q Consensus       541 -------------------~~~~~~~-------------------------------------~~~~-------------  551 (626)
                                         ..++...                                     ....             
T Consensus       182 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~  261 (319)
T 2y4i_B          182 LQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKP  261 (319)
T ss_dssp             ------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTCCC
T ss_pred             ccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCCCC
Confidence                               0000000                                     0000             


Q ss_pred             -----HHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccccCCCCCCCce
Q 006915          552 -----NEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAF  597 (626)
Q Consensus       552 -----~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~P~~  597 (626)
                           .....+.+++..||+.+|.+||++.++++.|+.+.........|..
T Consensus       262 ~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~~~~~~~~  312 (319)
T 2y4i_B          262 NLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRRLSHPGH  312 (319)
T ss_dssp             CCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC------------
T ss_pred             CCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhccCCCCcc
Confidence                 0112466788899999999999999999999988655444444443

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.81  E-value=8.2e-21  Score=191.23  Aligned_cols=130  Identities=28%  Similarity=0.340  Sum_probs=102.2

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCc------ccHHHHHHHHHh------ccccceecchHH--HHH
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASG------QGLEEFKNEIET------SNSNATIGANVK--AFV  469 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~------~~~~~~~~e~~~------~~~~~~~~~~~~--~~~  469 (626)
                      ++|.+.+.||+|+||.||+++.. +++.||||.++....      ...+.+.+|+..      ++++++.+....  .++
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV   84 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence            46889999999999999999985 589999999874321      235667777654      677777654432  223


Q ss_pred             HhhccccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCC----cEEEEecCcc
Q 006915          470 REMKTFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEM----NPKISDFGLA  537 (626)
Q Consensus       470 ~~~~~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~----~~kl~DFGla  537 (626)
                      ..++++.++++..      .+++..+..++.||+.||.|||+.+   |+||||||+|||++.++    .+||+|||++
T Consensus        85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~  159 (283)
T 3bhy_A           85 LILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIA  159 (283)
T ss_dssp             EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred             EEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChHHEEEecCCCCCCceEEEecccc
Confidence            4455555555533      4788999999999999999999998   99999999999998877    8999999998

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.81  E-value=1.8e-20  Score=194.22  Aligned_cols=131  Identities=23%  Similarity=0.316  Sum_probs=101.7

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCcccHHH--HHHHH-HhccccceecchHH--HHHHhhccccC
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQGLEE--FKNEI-ETSNSNATIGANVK--AFVREMKTFSD  477 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~--~~~e~-~~~~~~~~~~~~~~--~~~~~~~~~~~  477 (626)
                      .++|.+.+.||+|+||.||+++.. +++.||||.+.........+  ....+ .++|++.+.+....  .++.+++++.+
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~g  100 (342)
T 2qr7_A           21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKG  100 (342)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCCCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred             cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCC
Confidence            457999999999999999999885 58999999997654333222  23333 57888888775433  23345666666


Q ss_pred             CCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCC----CcEEEEecCcc
Q 006915          478 PTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQE----MNPKISDFGLA  537 (626)
Q Consensus       478 ~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~----~~~kl~DFGla  537 (626)
                      +++.      ..+++.....++.||+.||+|||+.+   |+||||||+|||+.++    +.+||+|||++
T Consensus       101 g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~g---ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a  167 (342)
T 2qr7_A          101 GELLDKILRQKFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFA  167 (342)
T ss_dssp             CBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSCSGGGEEECCCTTC
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---cEeccCCHHHEEEecCCCCcCeEEEEECCCc
Confidence            6543      34788999999999999999999998   9999999999998543    35999999998

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.81  E-value=1.9e-20  Score=191.48  Aligned_cols=177  Identities=19%  Similarity=0.273  Sum_probs=123.9

Q ss_pred             HhhcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCCcc------------cHHHHHHHH----Hhccccceecch
Q 006915          402 AATDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQ------------GLEEFKNEI----ETSNSNATIGAN  464 (626)
Q Consensus       402 ~~~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~~------------~~~~~~~e~----~~~~~~~~~~~~  464 (626)
                      ...++|.+.+.||+|+||.||+|+. .+++.||||.+......            .+......+    .+++++++++..
T Consensus        28 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~  107 (312)
T 2iwi_A           28 AFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWF  107 (312)
T ss_dssp             -----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC
T ss_pred             hhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEE
Confidence            3457899999999999999999987 46889999999643211            122233344    478888888765


Q ss_pred             HH--HHHHhhcc-ccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEEC-CCCcEEEEec
Q 006915          465 VK--AFVREMKT-FSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLD-QEMNPKISDF  534 (626)
Q Consensus       465 ~~--~~~~~~~~-~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~-~~~~~kl~DF  534 (626)
                      ..  .++..+++ ..++++.      ..+++..++.++.||+.||.|||+.+   |+||||||+|||++ .++.+||+||
T Consensus       108 ~~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~kl~df  184 (312)
T 2iwi_A          108 ETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRG---VVHRDIKDENILIDLRRGCAKLIDF  184 (312)
T ss_dssp             -----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHT---EECCCCSGGGEEEETTTTEEEECCC
T ss_pred             ecCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChhhEEEeCCCCeEEEEEc
Confidence            43  22233444 3334432      24789999999999999999999998   99999999999999 8899999999


Q ss_pred             Ccchhcccccc------------------------------------------C-----------CCCChHHHHHHHHHH
Q 006915          535 GLALDMMDQKL------------------------------------------H-----------ASSKPNEILKCINVG  561 (626)
Q Consensus       535 Gla~~~~~~~~------------------------------------------~-----------~~~~~~~~~~~~~~~  561 (626)
                      |++..+.+...                                          .           ...+......+.+++
T Consensus       185 g~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~li  264 (312)
T 2iwi_A          185 GSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEAELHFPAHVSPDCCALI  264 (312)
T ss_dssp             SSCEECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHHTCCCCCTTSCHHHHHHH
T ss_pred             chhhhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHHhhhccCCcccCCHHHHHHH
Confidence            99732211100                                          0           000111223567788


Q ss_pred             HHhcccCCCCCCCHHHHHHH
Q 006915          562 LLCVQEDPNDRPTMSDVVIM  581 (626)
Q Consensus       562 ~~C~~~~p~~RPs~~~vl~~  581 (626)
                      ..|++.+|.+||++.++++.
T Consensus       265 ~~~l~~~p~~Rps~~e~l~~  284 (312)
T 2iwi_A          265 RRCLAPKPSSRPSLEEILLD  284 (312)
T ss_dssp             HHHTCSSTTTSCCHHHHHHS
T ss_pred             HHHccCChhhCcCHHHHhcC
Confidence            89999999999999999975

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.81  E-value=4.2e-21  Score=198.19  Aligned_cols=131  Identities=24%  Similarity=0.390  Sum_probs=100.9

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCc--ccHHHHHHHHH------hccccceecchHH--HHHHhh
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASG--QGLEEFKNEIE------TSNSNATIGANVK--AFVREM  472 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~--~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~  472 (626)
                      .++|++.+.||+|+||.||+|+.. +++.||||++.....  ...+.+.+|+.      +++++++++.+..  .++.++
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  103 (331)
T 4aaa_A           24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF  103 (331)
T ss_dssp             GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence            357899999999999999999985 489999999865432  22344555654      3777777765432  122334


Q ss_pred             ccccCCCc------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          473 KTFSDPTL------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       473 ~~~~~~~l------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +++.++.+      ...+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus       104 e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~  171 (331)
T 4aaa_A          104 EFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFA  171 (331)
T ss_dssp             ECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred             ecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCC---EEccCcChheEEEcCCCcEEEEeCCCc
Confidence            44443322      234789999999999999999999998   999999999999999999999999998

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.81  E-value=2.7e-20  Score=195.31  Aligned_cols=130  Identities=27%  Similarity=0.334  Sum_probs=99.7

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCC--CcccHHHHHHHHHh------ccccceecchHH--------
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSA--SGQGLEEFKNEIET------SNSNATIGANVK--------  466 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~--~~~~~~~~~~e~~~------~~~~~~~~~~~~--------  466 (626)
                      .++|.+.+.||+|+||.||+|+.. +++.||||++...  .......+.+|+..      +|++++.+....        
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~  103 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ  103 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred             hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence            467999999999999999999874 5889999999753  22334556666553      777777654321        


Q ss_pred             HHHHhhccccCCCc----ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          467 AFVREMKTFSDPTL----SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       467 ~~~~~~~~~~~~~l----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      .++.+++++.+ ++    ...+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus       104 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~a  174 (371)
T 2xrw_A          104 DVYIVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA  174 (371)
T ss_dssp             EEEEEEECCSE-EHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCCCC-
T ss_pred             ceEEEEEcCCC-CHHHHHhhccCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEEEeecc
Confidence            12233444432 22    234788899999999999999999998   999999999999999999999999998

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.81  E-value=3.4e-20  Score=192.70  Aligned_cols=132  Identities=30%  Similarity=0.390  Sum_probs=93.4

Q ss_pred             HhhcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCcc-----cHHHHHHHHH------hccccceecchHH--H
Q 006915          402 AATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQ-----GLEEFKNEIE------TSNSNATIGANVK--A  467 (626)
Q Consensus       402 ~~~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~-----~~~~~~~e~~------~~~~~~~~~~~~~--~  467 (626)
                      ...++|.+.+.||+|+||.||+|+.. +++.||||++......     ....+.+|++      ++|++++++....  .
T Consensus         7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   86 (346)
T 1ua2_A            7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN   86 (346)
T ss_dssp             ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred             HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence            34568999999999999999999985 5899999999743211     1224455554      4777777665322  1


Q ss_pred             HHHhhccccCCCc-------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          468 FVREMKTFSDPTL-------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       468 ~~~~~~~~~~~~l-------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +..+++++.+ ++       ...+++..+..++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus        87 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a  159 (346)
T 1ua2_A           87 ISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLA  159 (346)
T ss_dssp             CEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCCGGG
T ss_pred             eEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCCHHHEEEcCCCCEEEEecccc
Confidence            2222333322 21       224778889999999999999999998   999999999999999999999999998

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.81  E-value=9.7e-21  Score=207.45  Aligned_cols=132  Identities=30%  Similarity=0.357  Sum_probs=104.8

Q ss_pred             hhcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCC---CcccHHHHHHHHH------hccccceecchHH--HHHH
Q 006915          403 ATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSA---SGQGLEEFKNEIE------TSNSNATIGANVK--AFVR  470 (626)
Q Consensus       403 ~~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~---~~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~  470 (626)
                      ..++|.+.+.||+|+||.||+|+.. +++.||||++...   .......+.+|+.      +++++.+.+....  .++.
T Consensus       182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l  261 (576)
T 2acx_A          182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL  261 (576)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence            3567999999999999999999885 6999999999643   1233445555654      4677777654332  3345


Q ss_pred             hhccccCCCccc--------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          471 EMKTFSDPTLSA--------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       471 ~~~~~~~~~l~~--------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +++++.++++..        .+++..+..++.||+.||+|||+.+   |+||||||+||||+.++.+||+|||++
T Consensus       262 VmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~g---IvHrDLKPeNILld~~g~vKL~DFGla  333 (576)
T 2acx_A          262 VLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLA  333 (576)
T ss_dssp             EECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTC
T ss_pred             EEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCchheEEEeCCCCeEEEecccc
Confidence            567776666532        2789999999999999999999998   999999999999999999999999998

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.81  E-value=1.1e-20  Score=196.44  Aligned_cols=130  Identities=22%  Similarity=0.366  Sum_probs=102.5

Q ss_pred             hcCccccccccccCeEEEEEEEcCCCcEEEEEEecCCCccc-----------------HHHHHHHHHh------ccccce
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQG-----------------LEEFKNEIET------SNSNAT  460 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~-----------------~~~~~~e~~~------~~~~~~  460 (626)
                      .++|.+.+.||+|+||.||+|+. +++.||||.+.......                 .+.+.+|+..      ++++++
T Consensus        30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~  108 (348)
T 2pml_X           30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC  108 (348)
T ss_dssp             ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred             cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence            46899999999999999999999 89999999987432111                 1677788765      566666


Q ss_pred             ecchHH--HHHHhhccccCCCcc--------------cCCCHHHHHHHHHHHHHHHHHHHh-CCCCceEecCCCCCCeEE
Q 006915          461 IGANVK--AFVREMKTFSDPTLS--------------ALLHWEMRFNIIIGIARGLLYLHQ-DSRLRIIHRDLKTSNILL  523 (626)
Q Consensus       461 ~~~~~~--~~~~~~~~~~~~~l~--------------~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivHrDlkp~NILl  523 (626)
                      .+....  .++.+++++.++++.              ..+++..+..++.||+.||.|||+ .+   |+||||||+|||+
T Consensus       109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dl~p~Nil~  185 (348)
T 2pml_X          109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN---ICHRDVKPSNILM  185 (348)
T ss_dssp             SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSC---EECCCCCGGGEEE
T ss_pred             EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCC---EeecCCChHhEEE
Confidence            554332  223345555554443              346789999999999999999998 77   9999999999999


Q ss_pred             CCCCcEEEEecCcc
Q 006915          524 DQEMNPKISDFGLA  537 (626)
Q Consensus       524 ~~~~~~kl~DFGla  537 (626)
                      +.++.+||+|||++
T Consensus       186 ~~~~~~kl~dfg~~  199 (348)
T 2pml_X          186 DKNGRVKLSDFGES  199 (348)
T ss_dssp             CTTSCEEECCCTTC
T ss_pred             cCCCcEEEeccccc
Confidence            99999999999988

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.81  E-value=5.8e-21  Score=197.04  Aligned_cols=132  Identities=25%  Similarity=0.331  Sum_probs=95.1

Q ss_pred             HhhcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCCc--ccHHHHHHHHHh------ccccceecchHH--HHHH
Q 006915          402 AATDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASG--QGLEEFKNEIET------SNSNATIGANVK--AFVR  470 (626)
Q Consensus       402 ~~~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~--~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~  470 (626)
                      ...++|.+.+.||+|+||.||+|+. .+++.||||+++....  .....+.+|+..      ++++++.+....  .++.
T Consensus        31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  110 (329)
T 3gbz_A           31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHL  110 (329)
T ss_dssp             -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred             cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEE
Confidence            4456899999999999999999986 4689999999974332  223445566553      667766654322  1223


Q ss_pred             hhccccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEE-----CCCCcEEEEecCcc
Q 006915          471 EMKTFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILL-----DQEMNPKISDFGLA  537 (626)
Q Consensus       471 ~~~~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl-----~~~~~~kl~DFGla  537 (626)
                      +++++. +++.      ..+++..+..++.||+.||.|||+.+   |+||||||+|||+     +.++.+||+|||++
T Consensus       111 v~e~~~-~~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a  184 (329)
T 3gbz_A          111 IFEYAE-NDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRR---CLHRDLKPQNLLLSVSDASETPVLKIGDFGLA  184 (329)
T ss_dssp             EEECCS-EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEC-----CCEEEECCTTHH
T ss_pred             EEecCC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC---EECCCCCHHHEEEecCCCCccceEEECcCCCc
Confidence            334333 2322      24788899999999999999999998   9999999999999     45566999999988

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.81  E-value=3.9e-21  Score=195.47  Aligned_cols=132  Identities=27%  Similarity=0.415  Sum_probs=89.9

Q ss_pred             hhcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC-cccHHHHHHHHHh------ccccceecchHH--HHHHhh
Q 006915          403 ATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS-GQGLEEFKNEIET------SNSNATIGANVK--AFVREM  472 (626)
Q Consensus       403 ~~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~  472 (626)
                      ..++|.+.+.||+|+||.||+|+.. +++.||||.+.... .....++.+|+..      ++++++++....  .++.++
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   92 (303)
T 2vwi_A           13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVM   92 (303)
T ss_dssp             CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEE
T ss_pred             chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEe
Confidence            4578999999999999999999874 68999999987432 2345567777654      666666654322  222334


Q ss_pred             ccccCCCcc--------------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          473 KTFSDPTLS--------------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       473 ~~~~~~~l~--------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +++.++++.              ..+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus        93 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~  168 (303)
T 2vwi_A           93 KLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG---QIHRDVKAGNILLGEDGSVQIADFGVS  168 (303)
T ss_dssp             ECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEEECCCHHH
T ss_pred             hhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCCChhhEEEcCCCCEEEEeccch
Confidence            444444432              34788999999999999999999998   999999999999999999999999987

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.81  E-value=2.7e-20  Score=194.76  Aligned_cols=130  Identities=27%  Similarity=0.364  Sum_probs=99.6

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC-cccHHHHHHHHHh------ccccceecchHH-------HH
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS-GQGLEEFKNEIET------SNSNATIGANVK-------AF  468 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~e~~~------~~~~~~~~~~~~-------~~  468 (626)
                      .++|.+.+.||+|+||.||+|+.. +++.||||++.... ......+.+|++.      +|++.+.+....       .+
T Consensus        26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~  105 (364)
T 3qyz_A           26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV  105 (364)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred             cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence            467999999999999999999874 68899999997533 2334566677654      666666553321       11


Q ss_pred             HHhhccccCCCcc-----cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          469 VREMKTFSDPTLS-----ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       469 ~~~~~~~~~~~l~-----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +.+++++. +++.     ..+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus       106 ~iv~e~~~-~~L~~~l~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a  175 (364)
T 3qyz_A          106 YIVQDLME-TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLA  175 (364)
T ss_dssp             EEEEECCS-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred             EEEEcccC-cCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChHhEEECCCCCEEEEeCcce
Confidence            12233322 2332     24788999999999999999999998   999999999999999999999999988

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.81  E-value=8.5e-21  Score=198.83  Aligned_cols=133  Identities=26%  Similarity=0.234  Sum_probs=98.7

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCc---ccHHHHHHHHH-------hccccceecchHH--HHHH
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASG---QGLEEFKNEIE-------TSNSNATIGANVK--AFVR  470 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~---~~~~~~~~e~~-------~~~~~~~~~~~~~--~~~~  470 (626)
                      .++|++.+.||+|+||.||+|+.. +++.||||++++...   .....+..|..       +++++++.+....  .++.
T Consensus        37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l  116 (373)
T 2r5t_A           37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF  116 (373)
T ss_dssp             GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence            457999999999999999999985 588999999975432   22334444433       3556666544322  3345


Q ss_pred             hhccccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchh
Q 006915          471 EMKTFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALD  539 (626)
Q Consensus       471 ~~~~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~  539 (626)
                      +++++.++++.      ..+.+.....++.||+.||+|||+++   |+||||||+|||++.++.+||+|||+++.
T Consensus       117 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~ikL~DFG~a~~  188 (373)
T 2r5t_A          117 VLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKE  188 (373)
T ss_dssp             EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCBCGG
T ss_pred             EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEeeCccccc
Confidence            66777777663      34678888899999999999999998   99999999999999999999999999843

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.81  E-value=1.9e-20  Score=187.81  Aligned_cols=131  Identities=29%  Similarity=0.396  Sum_probs=103.4

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHHHHh------ccccceecchHH--HHHHh
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNEIET------SNSNATIGANVK--AFVRE  471 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~  471 (626)
                      .++|.+.+.||+|+||.||+|+.. +++.||||.+....   ....+.+.+|+..      ++++++.+....  .++.+
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   89 (276)
T 2h6d_A           10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV   89 (276)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence            367899999999999999999985 68999999986432   2344566677654      667766654332  22344


Q ss_pred             hccccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          472 MKTFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       472 ~~~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++++.++++..      .+++..+..++.||+.||.|||+.+   |+|+||||+|||++.++.+||+|||++
T Consensus        90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~  158 (276)
T 2h6d_A           90 MEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLS  158 (276)
T ss_dssp             EECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHC---SSCCCCCGGGEEECTTSCEEECCCCGG
T ss_pred             EeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChhhEEECCCCCEEEeecccc
Confidence            55555555533      4678899999999999999999998   999999999999999999999999988

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.81  E-value=1.4e-20  Score=189.80  Aligned_cols=130  Identities=27%  Similarity=0.346  Sum_probs=101.1

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHHHHh------ccccceecchHH--HHHHhh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNEIET------SNSNATIGANVK--AFVREM  472 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~  472 (626)
                      ++|.+.+.||+|+||.||+|+.. +++.||||.+....   ......+.+|++.      ++++++.+....  .++..+
T Consensus        14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   93 (284)
T 2vgo_A           14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML   93 (284)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence            57899999999999999999885 57899999986421   2234566677654      667776654332  222344


Q ss_pred             ccccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          473 KTFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       473 ~~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +++.++++.      ..+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus        94 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~  161 (284)
T 2vgo_A           94 EFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWS  161 (284)
T ss_dssp             CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTCCEEECCCTTC
T ss_pred             EeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEEcCCCCEEEeccccc
Confidence            555444442      24778899999999999999999998   999999999999999999999999987

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.81  E-value=7.7e-21  Score=195.71  Aligned_cols=121  Identities=26%  Similarity=0.285  Sum_probs=94.4

Q ss_pred             ccccccCeEEEEEEEcC-CCcEEEEEEecCCCcccHHHHHHHHH-------hccccceecchHH--HHHHhhccccCCCc
Q 006915          411 NKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQGLEEFKNEIE-------TSNSNATIGANVK--AFVREMKTFSDPTL  480 (626)
Q Consensus       411 ~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~e~~-------~~~~~~~~~~~~~--~~~~~~~~~~~~~l  480 (626)
                      +.||+|+||.||+|+.. +++.||||++....   ...+.+|+.       ++|++++.+....  .++.+++++.++++
T Consensus        17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   93 (325)
T 3kn6_A           17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKRM---EANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL   93 (325)
T ss_dssp             CCSEEETTEEEEEEEETTTCCEEEEEEEEGGG---HHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEChhh---hhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcH
Confidence            78999999999999985 58999999997532   233444433       5788887765433  23345666666665


Q ss_pred             c------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCC---cEEEEecCcc
Q 006915          481 S------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEM---NPKISDFGLA  537 (626)
Q Consensus       481 ~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~---~~kl~DFGla  537 (626)
                      .      ..+++..+..++.||+.||.|||+.+   |+||||||+|||++.++   .+||+|||++
T Consensus        94 ~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a  156 (325)
T 3kn6_A           94 FERIKKKKHFSETEASYIMRKLVSAVSHMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFA  156 (325)
T ss_dssp             HHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEC----CEEEECCCTTC
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---CeecCCCHHHEEEecCCCcccEEEeccccc
Confidence            3      34789999999999999999999998   99999999999997665   8999999998

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.81  E-value=1.5e-20  Score=200.63  Aligned_cols=130  Identities=24%  Similarity=0.333  Sum_probs=98.5

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCcc--cHHHHHHHHHhccccceecchHH--------HHHHhhc
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQ--GLEEFKNEIETSNSNATIGANVK--------AFVREMK  473 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~--------~~~~~~~  473 (626)
                      ..|.+.+.||+|+||.||+|++. +++.||||++......  .+.++.+.+.++|++++.+....        .+..+++
T Consensus        54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e  133 (420)
T 1j1b_A           54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLD  133 (420)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTTSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEE
T ss_pred             ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehh
Confidence            35888899999999999999985 5899999998754322  23445555667888887654421        1122344


Q ss_pred             cccCCC---------cccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCC-CcEEEEecCcc
Q 006915          474 TFSDPT---------LSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQE-MNPKISDFGLA  537 (626)
Q Consensus       474 ~~~~~~---------l~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~-~~~kl~DFGla  537 (626)
                      ++.+..         ....+++..+..++.||++||.|||+.+   |+||||||+||||+.+ +.+||+|||++
T Consensus       134 ~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NILl~~~~~~~kl~DFG~a  204 (420)
T 1j1b_A          134 YVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSA  204 (420)
T ss_dssp             CCCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred             cccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChhhEEEeCCCCeEEeccchhh
Confidence            433210         1245788899999999999999999998   9999999999999965 66899999998

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.81  E-value=2.6e-20  Score=209.97  Aligned_cols=133  Identities=27%  Similarity=0.286  Sum_probs=103.6

Q ss_pred             hhcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCC---CcccHHHHHHHHHh-------ccccceecchHH--HHH
Q 006915          403 ATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSA---SGQGLEEFKNEIET-------SNSNATIGANVK--AFV  469 (626)
Q Consensus       403 ~~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~---~~~~~~~~~~e~~~-------~~~~~~~~~~~~--~~~  469 (626)
                      ..++|.+.+.||+|+||.||+|+.. +++.||||++++.   .....+.+..|..+       ++++.+......  .++
T Consensus       339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~  418 (674)
T 3pfq_A          339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY  418 (674)
T ss_dssp             -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred             cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence            4568999999999999999999985 5889999999743   22334555566543       344444433221  344


Q ss_pred             HhhccccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcch
Q 006915          470 REMKTFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLAL  538 (626)
Q Consensus       470 ~~~~~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~  538 (626)
                      .+++++.++++.      ..+++..+..++.||+.||+|||+.+   ||||||||+||||+.++.+||+|||+|+
T Consensus       419 lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~g---IiHrDLKp~NILl~~~g~ikL~DFGla~  490 (674)
T 3pfq_A          419 FVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCK  490 (674)
T ss_dssp             EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTS---EECCCCCSTTEEECSSSCEEECCCTTCE
T ss_pred             EEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eEeccCChhhEEEcCCCcEEEeecceee
Confidence            567777777764      34788899999999999999999998   9999999999999999999999999983

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.81  E-value=2.2e-20  Score=191.86  Aligned_cols=176  Identities=21%  Similarity=0.298  Sum_probs=124.1

Q ss_pred             hhcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCCcc------------cHHHHHHHHH--hccccceecchHH-
Q 006915          403 ATDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQ------------GLEEFKNEIE--TSNSNATIGANVK-  466 (626)
Q Consensus       403 ~~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~~------------~~~~~~~e~~--~~~~~~~~~~~~~-  466 (626)
                      ..++|.+.+.||+|+||.||+|+. .+++.||||.+......            .+.+....+.  +++++++++.... 
T Consensus        41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~  120 (320)
T 3a99_A           41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP  120 (320)
T ss_dssp             CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred             ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence            456799999999999999999986 46899999998743211            1233444443  2677777664332 


Q ss_pred             -HHHHhhccccC-CCc------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEEC-CCCcEEEEecCcc
Q 006915          467 -AFVREMKTFSD-PTL------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLD-QEMNPKISDFGLA  537 (626)
Q Consensus       467 -~~~~~~~~~~~-~~l------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~-~~~~~kl~DFGla  537 (626)
                       .++..+++... +++      ...+++..+..++.||+.||+|||+.+   |+||||||+|||++ +++.+||+|||++
T Consensus       121 ~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~kL~Dfg~~  197 (320)
T 3a99_A          121 DSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG  197 (320)
T ss_dssp             SEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCCTTC
T ss_pred             CcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---cEeCCCCHHHEEEeCCCCCEEEeeCccc
Confidence             12223333332 222      234788899999999999999999998   99999999999999 7899999999998


Q ss_pred             hhcccccc------------------------------------------CCC-----------CChHHHHHHHHHHHHh
Q 006915          538 LDMMDQKL------------------------------------------HAS-----------SKPNEILKCINVGLLC  564 (626)
Q Consensus       538 ~~~~~~~~------------------------------------------~~~-----------~~~~~~~~~~~~~~~C  564 (626)
                      ..+.+...                                          ...           ........+.+++..|
T Consensus       198 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~li~~~  277 (320)
T 3a99_A          198 ALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWC  277 (320)
T ss_dssp             EECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHHCCCCCSSCCCHHHHHHHHHH
T ss_pred             cccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhhhcccccccccCCHHHHHHHHHH
Confidence            32211100                                          000           0001123567788899


Q ss_pred             cccCCCCCCCHHHHHHH
Q 006915          565 VQEDPNDRPTMSDVVIM  581 (626)
Q Consensus       565 ~~~~p~~RPs~~~vl~~  581 (626)
                      |+.||.+||++.++++.
T Consensus       278 l~~dp~~Rps~~~ll~h  294 (320)
T 3a99_A          278 LALRPSDRPTFEEIQNH  294 (320)
T ss_dssp             TCSSGGGSCCHHHHHTS
T ss_pred             ccCChhhCcCHHHHhcC
Confidence            99999999999999875

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.81  E-value=9.8e-21  Score=200.28  Aligned_cols=130  Identities=22%  Similarity=0.318  Sum_probs=100.6

Q ss_pred             cCccccccccccCeEEEEEEEcCCCcEEEEEEecCCCcc--cHHHHHHHHHhccccceecchHH--------HHHHhhcc
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQ--GLEEFKNEIETSNSNATIGANVK--------AFVREMKT  474 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~--------~~~~~~~~  474 (626)
                      .+|.+.+.||+|+||.||+|+...+..||||++......  .+.++.+.+.++|++++.+....        .++.++++
T Consensus        40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~  119 (394)
T 4e7w_A           40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEY  119 (394)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEEC
T ss_pred             ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcchHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeec
Confidence            468899999999999999999977777999998643322  23445556667888888765421        12233444


Q ss_pred             ccCCC---------cccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEEC-CCCcEEEEecCcc
Q 006915          475 FSDPT---------LSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLD-QEMNPKISDFGLA  537 (626)
Q Consensus       475 ~~~~~---------l~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~-~~~~~kl~DFGla  537 (626)
                      +.+..         ....+++..+..++.||+.||+|||+.+   |+||||||+|||++ .++.+||+|||++
T Consensus       120 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~kL~DFG~a  189 (394)
T 4e7w_A          120 VPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSA  189 (394)
T ss_dssp             CSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred             cCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEcCCCCcEEEeeCCCc
Confidence            43221         1345788889999999999999999998   99999999999999 7999999999998

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.81  E-value=2.7e-20  Score=188.97  Aligned_cols=131  Identities=27%  Similarity=0.340  Sum_probs=102.4

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCc---------ccHHHHHHHHH-------hccccceecchHH
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASG---------QGLEEFKNEIE-------TSNSNATIGANVK  466 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~---------~~~~~~~~e~~-------~~~~~~~~~~~~~  466 (626)
                      .++|.+.+.||+|+||.||+|+.. +++.||||.+.....         ...+.+.+|++       +++++++.+....
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   95 (298)
T 1phk_A           16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET   95 (298)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred             hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence            468999999999999999999985 589999999975321         11234445543       5777777665432


Q ss_pred             --HHHHhhccccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          467 --AFVREMKTFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       467 --~~~~~~~~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                        .++.+++++.++++..      .+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus        96 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~  171 (298)
T 1phk_A           96 NTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFS  171 (298)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred             CCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEcCCCcEEEecccch
Confidence              2234455555555533      4778899999999999999999998   999999999999999999999999987

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.81  E-value=3.1e-20  Score=194.89  Aligned_cols=130  Identities=25%  Similarity=0.399  Sum_probs=99.9

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC--cccHHHHHHHHHh------ccccceecchHH--H-----
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS--GQGLEEFKNEIET------SNSNATIGANVK--A-----  467 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~e~~~------~~~~~~~~~~~~--~-----  467 (626)
                      .++|.+.+.||+|+||.||+|+.. +++.||||++....  ......+.+|+..      +|++.+++....  .     
T Consensus        41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~  120 (371)
T 4exu_A           41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  120 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred             cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence            467999999999999999999874 58999999997532  2234556666553      677766654322  0     


Q ss_pred             -HHHhhccccCCCc----ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          468 -FVREMKTFSDPTL----SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       468 -~~~~~~~~~~~~l----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                       ++.+++++. +++    ...+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus       121 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kL~Dfg~a  191 (371)
T 4exu_A          121 DFYLVMPFMQ-TDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLA  191 (371)
T ss_dssp             CCEEEEECCC-EEHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECSTTCC
T ss_pred             eEEEEEcccc-ccHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCcCHHHeEECCCCCEEEEecCcc
Confidence             122333333 222    234789999999999999999999998   999999999999999999999999998

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.81  E-value=1.6e-20  Score=198.24  Aligned_cols=132  Identities=27%  Similarity=0.413  Sum_probs=94.4

Q ss_pred             hhcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCC--CcccHHHHHHHHH-------hccccceecchHH----HH
Q 006915          403 ATDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSA--SGQGLEEFKNEIE-------TSNSNATIGANVK----AF  468 (626)
Q Consensus       403 ~~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~--~~~~~~~~~~e~~-------~~~~~~~~~~~~~----~~  468 (626)
                      ..++|.+.+.||+|+||.||+|.. .+++.||||++...  .......+.+|+.       ++|++++++....    .+
T Consensus         7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~   86 (388)
T 3oz6_A            7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV   86 (388)
T ss_dssp             HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred             ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence            357899999999999999999987 46899999998643  2233344555543       5777777765421    22


Q ss_pred             HHhhccccCCCcc-----cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcch
Q 006915          469 VREMKTFSDPTLS-----ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLAL  538 (626)
Q Consensus       469 ~~~~~~~~~~~l~-----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~  538 (626)
                      +.+++++. +++.     ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+|+
T Consensus        87 ~lv~e~~~-~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~  157 (388)
T 3oz6_A           87 YLVFDYME-TDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSR  157 (388)
T ss_dssp             EEEEECCS-EEHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             EEEecccC-cCHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHeEEcCCCCEEecCCcccc
Confidence            33444443 2322     34778888999999999999999998   9999999999999999999999999884

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.81  E-value=5e-20  Score=192.29  Aligned_cols=136  Identities=21%  Similarity=0.226  Sum_probs=92.0

Q ss_pred             HHHHhhcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCccc--HHHH---HHHHHhccccceecchHH------
Q 006915          399 SILAATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQG--LEEF---KNEIETSNSNATIGANVK------  466 (626)
Q Consensus       399 ~l~~~~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~--~~~~---~~e~~~~~~~~~~~~~~~------  466 (626)
                      ......++|.+.+.||+|+||.||+|+.. +++.||||++.......  ..+.   ...+.++|++++++....      
T Consensus        17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~   96 (360)
T 3e3p_A           17 RSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDR   96 (360)
T ss_dssp             HHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCT
T ss_pred             hchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhccccccc
Confidence            45567789999999999999999999984 58999999986532211  1111   223456888888765422      


Q ss_pred             ---HHHHhhccccCCC---------cccCCCHHHHHHHHHHHHHHHHHHH--hCCCCceEecCCCCCCeEECC-CCcEEE
Q 006915          467 ---AFVREMKTFSDPT---------LSALLHWEMRFNIIIGIARGLLYLH--QDSRLRIIHRDLKTSNILLDQ-EMNPKI  531 (626)
Q Consensus       467 ---~~~~~~~~~~~~~---------l~~~l~~~~~~~i~~~ia~gL~yLH--~~~~~~ivHrDlkp~NILl~~-~~~~kl  531 (626)
                         .++.+++++.+..         ....+++..+..++.|++.||.|||  +.+   |+||||||+|||++. ++.+||
T Consensus        97 ~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~---ivH~Dlkp~NIll~~~~~~~kl  173 (360)
T 3e3p_A           97 RDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVN---VCHRDIKPHNVLVNEADGTLKL  173 (360)
T ss_dssp             TCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTC---CBCSCCCGGGEEEETTTTEEEE
T ss_pred             cceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCC---eecCcCCHHHEEEeCCCCcEEE
Confidence               0223444444321         1234678888999999999999999  777   999999999999996 899999


Q ss_pred             EecCcc
Q 006915          532 SDFGLA  537 (626)
Q Consensus       532 ~DFGla  537 (626)
                      +|||++
T Consensus       174 ~Dfg~a  179 (360)
T 3e3p_A          174 CDFGSA  179 (360)
T ss_dssp             CCCTTC
T ss_pred             eeCCCc
Confidence            999998

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.81  E-value=2.6e-20  Score=194.96  Aligned_cols=130  Identities=30%  Similarity=0.402  Sum_probs=91.7

Q ss_pred             hcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCC--CcccHHHHHHHHHh------ccccceecchHH--------
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSA--SGQGLEEFKNEIET------SNSNATIGANVK--------  466 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~--~~~~~~~~~~e~~~------~~~~~~~~~~~~--------  466 (626)
                      .++|.+.+.||+|+||.||+|.. .+++.||||++...  .......+.+|+..      +|++.+.+....        
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~  107 (367)
T 2fst_X           28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN  107 (367)
T ss_dssp             ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence            46899999999999999999986 46899999999753  22334556666554      677776654321        


Q ss_pred             HHHHhhccccCCCcc-----cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          467 AFVREMKTFSDPTLS-----ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       467 ~~~~~~~~~~~~~l~-----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      .++..+++. ++++.     ..+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus       108 ~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kL~DFG~a  179 (367)
T 2fst_X          108 DVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA  179 (367)
T ss_dssp             CCEEEEECC-CEECC-----CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECC----
T ss_pred             eEEEEeccc-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHhhEEECCCCCEEEeecccc
Confidence            111222222 33333     24778899999999999999999998   999999999999999999999999998

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.81  E-value=2.3e-20  Score=203.09  Aligned_cols=131  Identities=31%  Similarity=0.421  Sum_probs=104.2

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHHHHh------ccccceecchHH--HHHHh
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNEIET------SNSNATIGANVK--AFVRE  471 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~  471 (626)
                      .++|.+.+.||+|+||.||+|+.. +++.||||++....   ......+.+|+..      +|++++++....  .++.+
T Consensus        25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv  104 (484)
T 3nyv_A           25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV  104 (484)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence            457899999999999999999985 68999999996432   3456677777764      677777665432  23344


Q ss_pred             hccccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEE---CCCCcEEEEecCcc
Q 006915          472 MKTFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILL---DQEMNPKISDFGLA  537 (626)
Q Consensus       472 ~~~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl---~~~~~~kl~DFGla  537 (626)
                      ++++.++++.      ..+++..+..++.||+.||.|||+.+   |+||||||+|||+   +.++.+||+|||++
T Consensus       105 ~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a  176 (484)
T 3nyv_A          105 GEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLS  176 (484)
T ss_dssp             ECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSTTCCEEECCTTHH
T ss_pred             EecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEecCCCCCcEEEEeeeee
Confidence            5556565552      34788999999999999999999998   9999999999999   56789999999988

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.81  E-value=2.9e-20  Score=190.26  Aligned_cols=130  Identities=35%  Similarity=0.498  Sum_probs=97.4

Q ss_pred             hhcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH--HHHHhhc
Q 006915          403 ATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK--AFVREMK  473 (626)
Q Consensus       403 ~~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~  473 (626)
                      ..+.|++.+.||+|+||.||+|... +++.||||.+....  ..+++.+|+..      ++++++++....  .++.+++
T Consensus        27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (314)
T 3com_A           27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME  104 (314)
T ss_dssp             ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence            4567999999999999999999885 58999999997543  34556666553      677777664432  2233445


Q ss_pred             cccCCCcc-------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          474 TFSDPTLS-------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       474 ~~~~~~l~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++.++++.       ..+++..+..++.||+.||.|||+.+   |+|+||||+|||++.++.+||+|||++
T Consensus       105 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~  172 (314)
T 3com_A          105 YCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMR---KIHRDIKAGNILLNTEGHAKLADFGVA  172 (314)
T ss_dssp             CCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTC
T ss_pred             cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCcCHHHEEECCCCCEEEeecccc
Confidence            55444432       34788999999999999999999998   999999999999999999999999998

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.81  E-value=1.6e-20  Score=192.43  Aligned_cols=131  Identities=26%  Similarity=0.393  Sum_probs=96.3

Q ss_pred             hcCccccccccccCeEEEEEEEcCC-CcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH----------
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFPG-GQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK----------  466 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~~-~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~----------  466 (626)
                      .++|.+.+.||+|+||.||+|+... ++.||||++........+++.+|++.      +|++++.+....          
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   89 (320)
T 2i6l_A           10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG   89 (320)
T ss_dssp             TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred             CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence            3578999999999999999999864 89999999986665566777777764      667776543210          


Q ss_pred             ------HHHHhhccccCCCcc-----cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEEC-CCCcEEEEec
Q 006915          467 ------AFVREMKTFSDPTLS-----ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLD-QEMNPKISDF  534 (626)
Q Consensus       467 ------~~~~~~~~~~~~~l~-----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~-~~~~~kl~DF  534 (626)
                            .++.+++++. +++.     ..+++..+..++.||+.||+|||+.+   |+||||||+|||++ +++.+||+||
T Consensus        90 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~kl~Df  165 (320)
T 2i6l_A           90 SLTELNSVYIVQEYME-TDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANLFINTEDLVLKIGDF  165 (320)
T ss_dssp             -CCSCSEEEEEEECCS-EEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTTEEEECCC
T ss_pred             cccccCceeEEeeccC-CCHHHHhhcCCccHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCeEEEccC
Confidence                  1112333333 2332     24678889999999999999999998   99999999999997 5679999999


Q ss_pred             Ccch
Q 006915          535 GLAL  538 (626)
Q Consensus       535 Gla~  538 (626)
                      |++.
T Consensus       166 g~~~  169 (320)
T 2i6l_A          166 GLAR  169 (320)
T ss_dssp             TTCB
T ss_pred             cccc
Confidence            9883

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.81  E-value=3.6e-20  Score=194.32  Aligned_cols=129  Identities=25%  Similarity=0.309  Sum_probs=94.0

Q ss_pred             hcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCCcccHHHHHHHHH-----------------hccccceecchH
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQGLEEFKNEIE-----------------TSNSNATIGANV  465 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~~~~~~~~~e~~-----------------~~~~~~~~~~~~  465 (626)
                      .++|.+.+.||+|+||.||+|+. .+++.||||++.... .....+.+|+.                 +++++++++...
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~   96 (373)
T 1q8y_A           18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN   96 (373)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred             CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence            35799999999999999999987 468999999997532 22333444433                 345666654332


Q ss_pred             H------HHHHhhccccCCCcc--------cCCCHHHHHHHHHHHHHHHHHHHhC-CCCceEecCCCCCCeEEC------
Q 006915          466 K------AFVREMKTFSDPTLS--------ALLHWEMRFNIIIGIARGLLYLHQD-SRLRIIHRDLKTSNILLD------  524 (626)
Q Consensus       466 ~------~~~~~~~~~~~~~l~--------~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~ivHrDlkp~NILl~------  524 (626)
                      .      .++.++++. ++++.        ..+++..+..++.||+.||+|||++ +   |+||||||+|||++      
T Consensus        97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~---ivH~Dikp~NIll~~~~~~~  172 (373)
T 1q8y_A           97 HKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG---IIHTDIKPENVLMEIVDSPE  172 (373)
T ss_dssp             EEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECSCCSGGGEEEEEEETTT
T ss_pred             ccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCC---EEecCCChHHeEEeccCCCc
Confidence            1      122223333 33222        2378889999999999999999998 7   99999999999994      


Q ss_pred             CCCcEEEEecCcc
Q 006915          525 QEMNPKISDFGLA  537 (626)
Q Consensus       525 ~~~~~kl~DFGla  537 (626)
                      ..+.+||+|||++
T Consensus       173 ~~~~~kl~Dfg~a  185 (373)
T 1q8y_A          173 NLIQIKIADLGNA  185 (373)
T ss_dssp             TEEEEEECCCTTC
T ss_pred             CcceEEEcccccc
Confidence            4458999999998

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.80  E-value=3.3e-20  Score=193.17  Aligned_cols=131  Identities=26%  Similarity=0.357  Sum_probs=100.6

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC-cccHHHHHHHHH------hccccceecchHH-------HH
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS-GQGLEEFKNEIE------TSNSNATIGANVK-------AF  468 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~e~~------~~~~~~~~~~~~~-------~~  468 (626)
                      .++|.+.+.||+|+||.||+|+.. +++.||||++.... ......+.+|+.      ++|++++++....       .+
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   89 (353)
T 2b9h_A           10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV   89 (353)
T ss_dssp             CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred             ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence            468999999999999999999975 58999999997533 223445556655      3777777654322       11


Q ss_pred             HHhhccccCCCcc-----cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcch
Q 006915          469 VREMKTFSDPTLS-----ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLAL  538 (626)
Q Consensus       469 ~~~~~~~~~~~l~-----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~  538 (626)
                      +..++++. +++.     ..+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++.
T Consensus        90 ~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~  160 (353)
T 2b9h_A           90 YIIQELMQ-TDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLAR  160 (353)
T ss_dssp             EEEECCCS-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             EEEEeccC-ccHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEcCCCcEEEEeccccc
Confidence            22233332 2332     34788999999999999999999998   9999999999999999999999999873

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.80  E-value=2.1e-20  Score=193.48  Aligned_cols=130  Identities=24%  Similarity=0.346  Sum_probs=97.9

Q ss_pred             hcCccccc-cccccCeEEEEEEEcC-CCcEEEEEEecCCCcccHHHHHHH---HHhccccceecchHH------HHHHhh
Q 006915          404 TDNFSEAN-KLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQGLEEFKNE---IETSNSNATIGANVK------AFVREM  472 (626)
Q Consensus       404 ~~~f~~~~-~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~e---~~~~~~~~~~~~~~~------~~~~~~  472 (626)
                      .++|.+.+ .||+|+||.||+|+.. +++.||||++.... ....++..+   ..+++++.+++....      .++.++
T Consensus        27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~  105 (336)
T 3fhr_A           27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIM  105 (336)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH-HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred             cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEE
Confidence            46788854 6999999999999985 68999999997532 222333333   334777777664322      133445


Q ss_pred             ccccCCCcc--------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECC---CCcEEEEecCcc
Q 006915          473 KTFSDPTLS--------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQ---EMNPKISDFGLA  537 (626)
Q Consensus       473 ~~~~~~~l~--------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~---~~~~kl~DFGla  537 (626)
                      +++.++++.        ..+++..+..++.||+.||.|||+.+   |+||||||+|||++.   ++.+||+|||++
T Consensus       106 e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~---ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~  178 (336)
T 3fhr_A          106 ECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN---IAHRDVKPENLLYTSKEKDAVLKLTDFGFA  178 (336)
T ss_dssp             ECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred             eccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEEecCCCceEEEeccccc
Confidence            665555442        24789999999999999999999998   999999999999976   455999999998

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.80  E-value=3e-20  Score=202.22  Aligned_cols=131  Identities=31%  Similarity=0.432  Sum_probs=103.2

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCC--CcccHHHHHHHHH------hccccceecchHH--HHHHhh
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSA--SGQGLEEFKNEIE------TSNSNATIGANVK--AFVREM  472 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~--~~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~  472 (626)
                      .++|.+.+.||+|+||.||+|+.. +++.||||++...  .......+.+|++      ++|++++++....  .++.++
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  100 (486)
T 3mwu_A           21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG  100 (486)
T ss_dssp             HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence            357999999999999999999885 6899999998642  2234556666665      4777777765432  233455


Q ss_pred             ccccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEEC---CCCcEEEEecCcc
Q 006915          473 KTFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLD---QEMNPKISDFGLA  537 (626)
Q Consensus       473 ~~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~---~~~~~kl~DFGla  537 (626)
                      +++.++++.      ..+++..+..++.||+.||.|||+.+   |+||||||+|||++   .++.+||+|||++
T Consensus       101 e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a  171 (486)
T 3mwu_A          101 ELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLS  171 (486)
T ss_dssp             CCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEESSSSTTCCEEECSCSCT
T ss_pred             EcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEEECCcC
Confidence            666666553      34788999999999999999999998   99999999999995   4567999999998

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.80  E-value=3.7e-20  Score=201.92  Aligned_cols=131  Identities=26%  Similarity=0.372  Sum_probs=100.1

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC--cccHHHHHHHHHh------ccccceecchHH--HHHHhh
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS--GQGLEEFKNEIET------SNSNATIGANVK--AFVREM  472 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~  472 (626)
                      .+.|.+.+.||+|+||.||+|+.. ++..||||++....  ......+.+|+..      +|++++++.+..  .++.++
T Consensus        36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  115 (494)
T 3lij_A           36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM  115 (494)
T ss_dssp             HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            346899999999999999999985 58899999997532  2335667777664      777777765433  233456


Q ss_pred             ccccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCC---CcEEEEecCcc
Q 006915          473 KTFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQE---MNPKISDFGLA  537 (626)
Q Consensus       473 ~~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~---~~~kl~DFGla  537 (626)
                      +++.++++.      ..+++..+..++.||+.||.|||+.+   |+||||||+|||++..   +.+||+|||++
T Consensus       116 e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a  186 (494)
T 3lij_A          116 ECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLS  186 (494)
T ss_dssp             ECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred             ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChhhEEEeCCCCCCcEEEEECCCC
Confidence            666666653      34778889999999999999999998   9999999999999764   55999999998

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.80  E-value=1.3e-19  Score=192.76  Aligned_cols=132  Identities=17%  Similarity=0.205  Sum_probs=92.9

Q ss_pred             hhcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCC---cccHHHHHHHHHhccccceecchHH------------
Q 006915          403 ATDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSAS---GQGLEEFKNEIETSNSNATIGANVK------------  466 (626)
Q Consensus       403 ~~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~---~~~~~~~~~e~~~~~~~~~~~~~~~------------  466 (626)
                      .+..|...+.||+|+||.||+|++ .+++.||||++....   ....+.|.+|+..............            
T Consensus        76 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~  155 (413)
T 3dzo_A           76 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD  155 (413)
T ss_dssp             CCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCE
T ss_pred             CceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchh
Confidence            345677889999999999999996 569999999998432   2336778888776443322100000            


Q ss_pred             --------HHHH--------------hhccccCCCcc-------------cCCCHHHHHHHHHHHHHHHHHHHhCCCCce
Q 006915          467 --------AFVR--------------EMKTFSDPTLS-------------ALLHWEMRFNIIIGIARGLLYLHQDSRLRI  511 (626)
Q Consensus       467 --------~~~~--------------~~~~~~~~~l~-------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~i  511 (626)
                              .++.              .+.....+++.             ..+++..++.|+.||+.||+|||+.+   |
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---i  232 (413)
T 3dzo_A          156 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---L  232 (413)
T ss_dssp             EEECCC---------------CCSEEEEEECCSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---E
T ss_pred             hcccCCCCccccccCCCccccccceEEEeehhcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC---c
Confidence                    0000              00001112222             22456788899999999999999998   9


Q ss_pred             EecCCCCCCeEECCCCcEEEEecCcc
Q 006915          512 IHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       512 vHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +||||||+||||+.++.+||+|||++
T Consensus       233 iHrDiKp~NILl~~~~~~kL~DFG~a  258 (413)
T 3dzo_A          233 VHTYLRPVDIVLDQRGGVFLTGFEHL  258 (413)
T ss_dssp             ECSCCCGGGEEECTTCCEEECCGGGC
T ss_pred             ccCCcccceEEEecCCeEEEEeccce
Confidence            99999999999999999999999997

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.80  E-value=7.7e-20  Score=188.84  Aligned_cols=129  Identities=23%  Similarity=0.364  Sum_probs=94.8

Q ss_pred             hcCccccccccccCeEEEEEEEc--CCCcEEEEEEecCCCcccHHHHHHHHHh------cc------ccceecchHH--H
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKF--PGGQQIAVKRLSSASGQGLEEFKNEIET------SN------SNATIGANVK--A  467 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~--~~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~------~~~~~~~~~~--~  467 (626)
                      .++|++.+.||+|+||.||+|..  .+++.||||+++... ...+.+.+|++.      .+      ++.+++....  .
T Consensus        13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~   91 (339)
T 1z57_A           13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH   91 (339)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred             cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence            35799999999999999999986  358899999997532 233445555443      22      4444432211  1


Q ss_pred             HHHhhccccCCCcc--------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECC--------------
Q 006915          468 FVREMKTFSDPTLS--------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQ--------------  525 (626)
Q Consensus       468 ~~~~~~~~~~~~l~--------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~--------------  525 (626)
                      ++.+++++ ++++.        ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.              
T Consensus        92 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~  167 (339)
T 1z57_A           92 ICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNK---LTHTDLKPENILFVQSDYTEAYNPKIKRD  167 (339)
T ss_dssp             EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCCCEEEEEC----CE
T ss_pred             EEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeccccccccCCccccc
Confidence            22334444 33332        23678899999999999999999998   999999999999987              


Q ss_pred             -----CCcEEEEecCcc
Q 006915          526 -----EMNPKISDFGLA  537 (626)
Q Consensus       526 -----~~~~kl~DFGla  537 (626)
                           ++.+||+|||++
T Consensus       168 ~~~~~~~~~kl~Dfg~~  184 (339)
T 1z57_A          168 ERTLINPDIKVVDFGSA  184 (339)
T ss_dssp             EEEESCCCEEECCCSSC
T ss_pred             cccccCCCceEeeCccc
Confidence                 678999999998

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.80  E-value=9.5e-20  Score=199.17  Aligned_cols=131  Identities=31%  Similarity=0.410  Sum_probs=102.1

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCc-------------ccHHHHHHHHHh------ccccceecc
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASG-------------QGLEEFKNEIET------SNSNATIGA  463 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~-------------~~~~~~~~e~~~------~~~~~~~~~  463 (626)
                      .++|.+.+.||+|+||.||+|+.. +++.||||++.....             ...+.+.+|+..      +|++++++.
T Consensus        35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~  114 (504)
T 3q5i_A           35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV  114 (504)
T ss_dssp             GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence            568999999999999999999985 588999999975321             234567777664      777777765


Q ss_pred             hHH--HHHHhhccccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCC---cEEEE
Q 006915          464 NVK--AFVREMKTFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEM---NPKIS  532 (626)
Q Consensus       464 ~~~--~~~~~~~~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~---~~kl~  532 (626)
                      ...  .++.+++++.++++.      ..+++..+..++.||+.||.|||+.+   |+||||||+|||++.++   .+||+
T Consensus       115 ~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~  191 (504)
T 3q5i_A          115 FEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHN---IVHRDIKPENILLENKNSLLNIKIV  191 (504)
T ss_dssp             EECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESSTTCCSSEEEC
T ss_pred             EEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCcHHHEEEecCCCCccEEEE
Confidence            433  233456666666653      34789999999999999999999998   99999999999998775   69999


Q ss_pred             ecCcc
Q 006915          533 DFGLA  537 (626)
Q Consensus       533 DFGla  537 (626)
                      |||++
T Consensus       192 Dfg~a  196 (504)
T 3q5i_A          192 DFGLS  196 (504)
T ss_dssp             CCTTC
T ss_pred             ECCCC
Confidence            99998

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.80  E-value=2.5e-20  Score=192.00  Aligned_cols=131  Identities=29%  Similarity=0.456  Sum_probs=98.6

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC-cccHHHHHHHHH-------hccccceecchHH--HHHHhh
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS-GQGLEEFKNEIE-------TSNSNATIGANVK--AFVREM  472 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~e~~-------~~~~~~~~~~~~~--~~~~~~  472 (626)
                      .++|.+.+.||+|+||.||+|... +++.||||++.... .....++..|+.       ++|++++++....  .++.++
T Consensus        21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~  100 (327)
T 3aln_A           21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM  100 (327)
T ss_dssp             SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence            367888899999999999999984 68999999997543 233344555543       3777777764332  111223


Q ss_pred             ccccCC----------CcccCCCHHHHHHHHHHHHHHHHHHHhC-CCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          473 KTFSDP----------TLSALLHWEMRFNIIIGIARGLLYLHQD-SRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       473 ~~~~~~----------~l~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +++.+.          .....+++..+..++.|++.||.|||+. +   |+||||||+|||++.++.+||+|||++
T Consensus       101 e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~  173 (327)
T 3aln_A          101 ELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK---IIHRDIKPSNILLDRSGNIKLCDFGIS  173 (327)
T ss_dssp             CCCSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS---CCCSCCCGGGEEEETTTEEEECCCSSS
T ss_pred             eecCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC---EeECCCCHHHEEEcCCCCEEEccCCCc
Confidence            333221          1234578899999999999999999998 7   999999999999999999999999988

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.80  E-value=3.4e-20  Score=190.72  Aligned_cols=132  Identities=27%  Similarity=0.451  Sum_probs=99.1

Q ss_pred             HhhcCccccccccccCeEEEEEEEc--CCCcEEEEEEecCCCc--cc------HHHHHHHH---HhccccceecchH---
Q 006915          402 AATDNFSEANKLGKGGFGPVYKAKF--PGGQQIAVKRLSSASG--QG------LEEFKNEI---ETSNSNATIGANV---  465 (626)
Q Consensus       402 ~~~~~f~~~~~lG~G~fG~Vy~~~~--~~~~~vAvK~l~~~~~--~~------~~~~~~e~---~~~~~~~~~~~~~---  465 (626)
                      .+.++|.+.+.||+|+||.||+|+.  .+++.||||++.....  ..      +....+.+   .+++++++++.+.   
T Consensus         8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~   87 (326)
T 1blx_A            8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR   87 (326)
T ss_dssp             CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred             CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence            3457899999999999999999987  3588999999864221  11      11222223   4688888876543   


Q ss_pred             ----HHHHHhhccccCCCcc--------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEe
Q 006915          466 ----KAFVREMKTFSDPTLS--------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISD  533 (626)
Q Consensus       466 ----~~~~~~~~~~~~~~l~--------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~D  533 (626)
                          ..++.+++++. +++.        ..+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|
T Consensus        88 ~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~g---i~H~dlkp~Nili~~~~~~kl~D  163 (326)
T 1blx_A           88 TDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLAD  163 (326)
T ss_dssp             CSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECS
T ss_pred             cCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHHHeEEcCCCCEEEec
Confidence                12223344433 2332        23788999999999999999999998   99999999999999999999999


Q ss_pred             cCcc
Q 006915          534 FGLA  537 (626)
Q Consensus       534 FGla  537 (626)
                      ||++
T Consensus       164 fg~~  167 (326)
T 1blx_A          164 FGLA  167 (326)
T ss_dssp             CCSC
T ss_pred             Cccc
Confidence            9998

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.80  E-value=1.7e-20  Score=199.26  Aligned_cols=125  Identities=29%  Similarity=0.391  Sum_probs=87.0

Q ss_pred             ccc-cccccccCeEEEEEEEcC---CCcEEEEEEecCCCcccHHHHHHHH------HhccccceecchHH----HHHHhh
Q 006915          407 FSE-ANKLGKGGFGPVYKAKFP---GGQQIAVKRLSSASGQGLEEFKNEI------ETSNSNATIGANVK----AFVREM  472 (626)
Q Consensus       407 f~~-~~~lG~G~fG~Vy~~~~~---~~~~vAvK~l~~~~~~~~~~~~~e~------~~~~~~~~~~~~~~----~~~~~~  472 (626)
                      |.+ .++||+|+||.||+|++.   +++.||||++.....  ...+.+|+      .++|++.+.+....    .++.++
T Consensus        22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~   99 (405)
T 3rgf_A           22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLF   99 (405)
T ss_dssp             EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC--CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEE
T ss_pred             hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC--CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEE
Confidence            444 458999999999999965   478999999975422  23444454      45777777665421    122233


Q ss_pred             ccccCCCc---------------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEE----CCCCcEEEEe
Q 006915          473 KTFSDPTL---------------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILL----DQEMNPKISD  533 (626)
Q Consensus       473 ~~~~~~~l---------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl----~~~~~~kl~D  533 (626)
                      ++..+ ++               ...+++..+..|+.||+.||.|||+.+   |+||||||+||||    +.++.+||+|
T Consensus       100 e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl~D  175 (405)
T 3rgf_A          100 DYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIAD  175 (405)
T ss_dssp             ECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECCSSTTTTCEEECC
T ss_pred             eCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeCCCcCHHHeEEecCCCCCCcEEEEE
Confidence            33221 21               113788899999999999999999998   9999999999999    7789999999


Q ss_pred             cCcc
Q 006915          534 FGLA  537 (626)
Q Consensus       534 FGla  537 (626)
                      ||++
T Consensus       176 fg~a  179 (405)
T 3rgf_A          176 MGFA  179 (405)
T ss_dssp             TTCC
T ss_pred             CCCc
Confidence            9998

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.80  E-value=7.6e-20  Score=190.52  Aligned_cols=130  Identities=25%  Similarity=0.395  Sum_probs=99.8

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC--cccHHHHHHHHHh------ccccceecchHH--------
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS--GQGLEEFKNEIET------SNSNATIGANVK--------  466 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~e~~~------~~~~~~~~~~~~--------  466 (626)
                      .++|.+.+.||+|+||.||+|+.. +++.||||++....  ......+.+|+..      +|++.+.+....        
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~  102 (353)
T 3coi_A           23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  102 (353)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence            357889999999999999999874 58999999997532  2234556666553      677766654322        


Q ss_pred             HHHHhhccccCCCcc----cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          467 AFVREMKTFSDPTLS----ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       467 ~~~~~~~~~~~~~l~----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      .++.+++++. +++.    ..+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus       103 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~  173 (353)
T 3coi_A          103 DFYLVMPFMQ-TDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLA  173 (353)
T ss_dssp             CCEEEEECCS-EEGGGTTTSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTCCEEECSTTCT
T ss_pred             eEEEEecccc-CCHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEeECCCCcEEEeecccc
Confidence            1123333333 2333    24788999999999999999999998   999999999999999999999999998

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.80  E-value=5e-20  Score=189.31  Aligned_cols=131  Identities=25%  Similarity=0.278  Sum_probs=97.9

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCc--------ccHHHHHHHHH------hccccceecchHH-H
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASG--------QGLEEFKNEIE------TSNSNATIGANVK-A  467 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~--------~~~~~~~~e~~------~~~~~~~~~~~~~-~  467 (626)
                      .++|.+.+.||+|+||.||+|+.. +++.||||.+.....        .....+.+|++      +++++++.+.... .
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   88 (322)
T 2ycf_A            9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED   88 (322)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred             hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence            457999999999999999999874 588999999874321        11223445544      4777777664322 2


Q ss_pred             HHHhhccccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCc---EEEEecCcc
Q 006915          468 FVREMKTFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMN---PKISDFGLA  537 (626)
Q Consensus       468 ~~~~~~~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~---~kl~DFGla  537 (626)
                      ++.+++++.++++.      ..+++.....++.||+.||.|||+.+   |+||||||+|||++.++.   +||+|||++
T Consensus        89 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~  164 (322)
T 2ycf_A           89 YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHS  164 (322)
T ss_dssp             EEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSSSCCEEECCCTTC
T ss_pred             eEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEecCCCCCeEEEccCccc
Confidence            33445555555442      34778899999999999999999998   999999999999987654   999999998

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.80  E-value=5.2e-21  Score=202.90  Aligned_cols=192  Identities=20%  Similarity=0.196  Sum_probs=131.1

Q ss_pred             cCHHHHHHhhcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHHH------Hhccccceecch
Q 006915          395 IDFESILAATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNEI------ETSNSNATIGAN  464 (626)
Q Consensus       395 ~~~~~l~~~~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e~------~~~~~~~~~~~~  464 (626)
                      +.++++....++|++.+.||+|+||.||+++.. +++.||||++++..   ......+.+|.      .+++++.+.+..
T Consensus        51 ~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~  130 (412)
T 2vd5_A           51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF  130 (412)
T ss_dssp             HHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred             hhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence            345566667889999999999999999999985 68999999997421   11122234443      346777776544


Q ss_pred             HH--HHHHhhccccCCCccc-------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecC
Q 006915          465 VK--AFVREMKTFSDPTLSA-------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFG  535 (626)
Q Consensus       465 ~~--~~~~~~~~~~~~~l~~-------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFG  535 (626)
                      ..  .++.+++++.++++..       .+++..+..++.||+.||+|||+.+   |+||||||+||||+.++.+||+|||
T Consensus       131 ~~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILld~~g~vkL~DFG  207 (412)
T 2vd5_A          131 QDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLG---YVHRDIKPDNILLDRCGHIRLADFG  207 (412)
T ss_dssp             ECSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCT
T ss_pred             eeCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccCHHHeeecCCCCEEEeech
Confidence            32  3345567776666532       4778888999999999999999998   9999999999999999999999999


Q ss_pred             cchhcccccc------CC---CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccccccCCCCCCCc
Q 006915          536 LALDMMDQKL------HA---SSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPA  596 (626)
Q Consensus       536 la~~~~~~~~------~~---~~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~~~~~~~~~P~  596 (626)
                      ++..+.....      ..   ...++.....       -........+.+.++++|+.+++++.+++.|.
T Consensus       208 la~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-------~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf  270 (412)
T 2vd5_A          208 SCLKLRADGTVRSLVAVGTPDYLSPEILQAV-------GGGPGTGSYGPECDWWALGVFAYEMFYGQTPF  270 (412)
T ss_dssp             TCEECCTTSCEECSSCCSCGGGCCHHHHHHH-------HTCTTCSEECTHHHHHHHHHHHHHHHHSSCTT
T ss_pred             hheeccCCCccccceeccccCcCCHHHHhhc-------ccCcCCCCCChHHhhhHHhHHHHHHHhCCCCC
Confidence            9965533211      00   1112211100       00111233456666777777666766666664

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.79  E-value=1.1e-19  Score=191.41  Aligned_cols=132  Identities=26%  Similarity=0.282  Sum_probs=93.5

Q ss_pred             hhcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCcccHHHHHHHHHh-------c-----cccceecchHH--H
Q 006915          403 ATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQGLEEFKNEIET-------S-----NSNATIGANVK--A  467 (626)
Q Consensus       403 ~~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~e~~~-------~-----~~~~~~~~~~~--~  467 (626)
                      ..++|.+.+.||+|+||.||+|+.. +++.||||+++... ....++..|+..       .     +++.+.+....  .
T Consensus        52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  130 (382)
T 2vx3_A           52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNH  130 (382)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTE
T ss_pred             eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCc
Confidence            4578999999999999999999875 58899999997532 223344444332       1     14444332211  1


Q ss_pred             HHHhhccccCCCcc--------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEEC--CCCcEEEEecCcc
Q 006915          468 FVREMKTFSDPTLS--------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLD--QEMNPKISDFGLA  537 (626)
Q Consensus       468 ~~~~~~~~~~~~l~--------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~--~~~~~kl~DFGla  537 (626)
                      ++.+++++. +++.        ..+++..+..++.||+.||.|||++ ..+|+||||||+|||++  .++.+||+|||++
T Consensus       131 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a  208 (382)
T 2vx3_A          131 LCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSS  208 (382)
T ss_dssp             EEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred             eEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccCc
Confidence            222334332 2322        2378899999999999999999953 12499999999999994  5788999999998

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.79  E-value=8.5e-20  Score=185.34  Aligned_cols=129  Identities=26%  Similarity=0.437  Sum_probs=96.5

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC--cccHHHHHHHHHh------ccccceecchHH--HHHHhhc
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS--GQGLEEFKNEIET------SNSNATIGANVK--AFVREMK  473 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~  473 (626)
                      ++|++.+.||+|+||.||+|+.. +++.||||.+....  ......+.+|+..      ++++++++....  .++..++
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (299)
T 2r3i_A            3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   82 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence            57899999999999999999885 68999999987432  2234566677654      666666654322  1122233


Q ss_pred             cccCCCcc--------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          474 TFSDPTLS--------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       474 ~~~~~~l~--------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++. +++.        ..+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus        83 ~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~  150 (299)
T 2r3i_A           83 FLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLA  150 (299)
T ss_dssp             CCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECSTTHH
T ss_pred             ccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHeEEcCCCCEEECcchhh
Confidence            332 2221        23678889999999999999999998   999999999999999999999999987

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.79  E-value=8.4e-20  Score=184.36  Aligned_cols=131  Identities=31%  Similarity=0.427  Sum_probs=101.8

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC--cccHHHHHHHHHh------ccccceecchHH--HHHHhh
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS--GQGLEEFKNEIET------SNSNATIGANVK--AFVREM  472 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~  472 (626)
                      .++|.+.+.||+|+||.||+|+.. +++.||||++....  ......+.+|++.      ++++++++....  .++..+
T Consensus        21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  100 (287)
T 2wei_A           21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG  100 (287)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEE
Confidence            457999999999999999999985 68999999987432  3345677777664      667766654332  222344


Q ss_pred             ccccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCC---CcEEEEecCcc
Q 006915          473 KTFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQE---MNPKISDFGLA  537 (626)
Q Consensus       473 ~~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~---~~~kl~DFGla  537 (626)
                      +++.++++.      ..+++..+..++.||+.||.|||+.+   |+||||||+|||++.+   +.+||+|||++
T Consensus       101 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~  171 (287)
T 2wei_A          101 ELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLS  171 (287)
T ss_dssp             CCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECSTTGG
T ss_pred             EccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChhhEEEecCCCcccEEEeccCcc
Confidence            555555542      34788999999999999999999998   9999999999999754   46999999987

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.79  E-value=2.1e-19  Score=186.91  Aligned_cols=130  Identities=21%  Similarity=0.293  Sum_probs=92.5

Q ss_pred             hcCccccccccccCeEEEEEEEcC-C-CcEEEEEEecCCCcccHHHHHHHHHh------cc------ccceecchH--HH
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-G-GQQIAVKRLSSASGQGLEEFKNEIET------SN------SNATIGANV--KA  467 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~-~~~vAvK~l~~~~~~~~~~~~~e~~~------~~------~~~~~~~~~--~~  467 (626)
                      .++|.+.+.||+|+||.||+|+.. + ++.||||+++... ...+.+.+|+..      .+      ++.+.....  ..
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~   96 (355)
T 2eu9_A           18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH   96 (355)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred             cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence            368999999999999999999874 3 4789999997532 233445555443      22      222222111  11


Q ss_pred             HHHhhccccCCCc-------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEE-----------------
Q 006915          468 FVREMKTFSDPTL-------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILL-----------------  523 (626)
Q Consensus       468 ~~~~~~~~~~~~l-------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl-----------------  523 (626)
                      ++.+++++....+       ...+++..+..++.||+.||.|||+.+   |+||||||+|||+                 
T Consensus        97 ~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~  173 (355)
T 2eu9_A           97 MCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQ---LTHTDLKPENILFVNSEFETLYNEHKSCEE  173 (355)
T ss_dssp             EEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEESCCCEEEEECCC-CCCE
T ss_pred             EEEEEeccCCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecccccccccccccccc
Confidence            2223343322111       124789999999999999999999998   9999999999999                 


Q ss_pred             --CCCCcEEEEecCcc
Q 006915          524 --DQEMNPKISDFGLA  537 (626)
Q Consensus       524 --~~~~~~kl~DFGla  537 (626)
                        +.++.+||+|||++
T Consensus       174 ~~~~~~~~kl~Dfg~~  189 (355)
T 2eu9_A          174 KSVKNTSIRVADFGSA  189 (355)
T ss_dssp             EEESCCCEEECCCTTC
T ss_pred             cccCCCcEEEeecCcc
Confidence              56789999999998

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.79  E-value=7.4e-20  Score=199.86  Aligned_cols=131  Identities=31%  Similarity=0.383  Sum_probs=103.4

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHHHHh------ccccceecchHH--HHHHh
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNEIET------SNSNATIGANVK--AFVRE  471 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~  471 (626)
                      .++|.+.+.||+|+||.||+|+.. +++.||||++.+..   ......+.+|+.+      ++++.+.+....  .++.+
T Consensus       184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV  263 (543)
T 3c4z_A          184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV  263 (543)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence            467899999999999999999985 59999999997432   2334556666543      666766554322  23445


Q ss_pred             hccccCCCcc----------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          472 MKTFSDPTLS----------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       472 ~~~~~~~~l~----------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++++.++++.          ..+++..+..++.||+.||.|||+.+   |+||||||+||||+.++.+||+|||++
T Consensus       264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g---IvHrDLKP~NILl~~~g~vkL~DFGla  336 (543)
T 3c4z_A          264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLA  336 (543)
T ss_dssp             ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTC
T ss_pred             EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcC---CcccCCChHHEEEeCCCCEEEeeccee
Confidence            6666666552          24788999999999999999999998   999999999999999999999999998

>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A*

Probab=99.78  E-value=2e-19  Score=178.50  Aligned_cols=131  Identities=17%  Similarity=0.203  Sum_probs=90.8

Q ss_pred             CCcccEEEEeCCCCceEEeeCCCCCcccccCcc----ccCcceEEEccCCCCCCCccEEEEEc-CCCceeEEec-CCeeE
Q 006915            1 MDSGNFVLQDDQVRKNLWESFKYPTDTFLAGMY----MGENLSLTSWAGHDDPKPGNFTFKMD-QGENQYQITK-PLIRH   74 (626)
Q Consensus         1 ldsGNlvl~~~~~~~~lWqSFd~PtDTllpgq~----l~~~~~L~S~~s~~d~s~G~~~l~~~-~~~~~~~~~~-~~~~y   74 (626)
                      +|+|||||+|   +.+||||  ||||||||||+    |..+++|   ++.+||++|.|+|+|+ +|.  ++++. +...|
T Consensus       117 ~d~GNlVl~~---~~~lWqS--~ptdtlLpg~~~~~~l~~g~~L---~S~~dps~G~fsl~l~~dGn--lvLy~~~~~~y  186 (276)
T 3m7h_A          117 QDDGNIVLVD---SLALWNG--TPAIPLVPGAIDSLLLAPGSEL---VQGVVYGAGASKLVFQGDGN--LVAYGPNGAAT  186 (276)
T ss_dssp             CTTSCEEEEE---EEEEEES--CTTSCCCCSCTTCEEECSSEEE---CTTCEEEETTEEEEECTTSC--EEEECTTSSEE
T ss_pred             eCCCCEEecC---CceeeCc--ccccccccccccccccccCccc---ccCCCCCCceEEEeecCCce--EEEEeCCCeEE
Confidence            6999999998   4799999  99999999999    7788888   5678999999999999 664  34444 46899


Q ss_pred             EeeCCcCCccccccccccceeceeeeeeeeecCCCCceeEEEEEecCCCceeEEEEEeecccEEEEEecCCCC-eEEEEe
Q 006915           75 WRSAESKDVFSSNEIIPYQILNLLSNFSHSVKPTGKNAVHPNLIVPSIDYSRTRLIMNYTGEIQYWTEDKVKG-WSLIWR  153 (626)
Q Consensus        75 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rl~l~~dG~l~~~~~~~~~~-W~~~~~  153 (626)
                      |++++|...      ...........+.+.++.  ....+.++..   ....+|++|+.||++++|.|   .. |...+.
T Consensus       187 W~Sgt~~~~------~~~l~l~~dGnLvl~d~~--~~~vWsS~t~---~~~~~rl~Ld~dGnLvly~~---~~~Wqsf~~  252 (276)
T 3m7h_A          187 WNAGTQGKG------AVRAVFQGDGNLVVYGAG--NAVLWHSHTG---GHASAVLRLQANGSIAILDE---KPVWARFGF  252 (276)
T ss_dssp             EECCCTTTT------CCEEEECTTSCEEEECTT--SCEEEECSCT---TCTTCEEEECTTSCEEEEEE---EEEEESSSC
T ss_pred             EECCCCCCc------cEEEEEcCCCeEEEEeCC--CcEEEEecCC---CCCCEEEEEcCCccEEEEcC---CCeEEccCc
Confidence            999998753      111111112223333321  1233333322   12347999999999999997   22 665555


Q ss_pred             cc
Q 006915          154 EP  155 (626)
Q Consensus       154 ~p  155 (626)
                      +|
T Consensus       253 ~P  254 (276)
T 3m7h_A          253 QP  254 (276)
T ss_dssp             CT
T ss_pred             cC
Confidence            55

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.78  E-value=8.9e-20  Score=186.82  Aligned_cols=130  Identities=25%  Similarity=0.468  Sum_probs=90.9

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCc-ccHHHHHHHH-------HhccccceecchHH--HHHHhh
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASG-QGLEEFKNEI-------ETSNSNATIGANVK--AFVREM  472 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~-~~~~~~~~e~-------~~~~~~~~~~~~~~--~~~~~~  472 (626)
                      .++|++.+.||+|+||.||+|+.. +++.||||++..... ....++..|.       .+++++++++....  .++.++
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~  103 (318)
T 2dyl_A           24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM  103 (318)
T ss_dssp             GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence            467888999999999999999985 689999999975432 2222222222       34677777765432  112223


Q ss_pred             ccccCCC-------cccCCCHHHHHHHHHHHHHHHHHHHhC-CCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          473 KTFSDPT-------LSALLHWEMRFNIIIGIARGLLYLHQD-SRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       473 ~~~~~~~-------l~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +++ +..       ....+++..+..++.||+.||.|||+. +   |+||||||+|||++.++.+||+|||++
T Consensus       104 e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~  172 (318)
T 2dyl_A          104 ELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHG---VIHRDVKPSNILLDERGQIKLCDFGIS  172 (318)
T ss_dssp             CCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHC---CCCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred             ecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCC---EEeCCCCHHHEEECCCCCEEEEECCCc
Confidence            333 111       123578899999999999999999985 7   999999999999999999999999988

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.78  E-value=1.8e-19  Score=204.16  Aligned_cols=178  Identities=18%  Similarity=0.187  Sum_probs=130.5

Q ss_pred             hcCccccccccccCeEEEEEEEcC--CCcEEEEEEecCCC-cccHHHHHHHHHh------ccccceecchHH--H-----
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP--GGQQIAVKRLSSAS-GQGLEEFKNEIET------SNSNATIGANVK--A-----  467 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~--~~~~vAvK~l~~~~-~~~~~~~~~e~~~------~~~~~~~~~~~~--~-----  467 (626)
                      .++|.+.+.||+|+||.||+|++.  +++.||||++.... ......+.+|+..      +|++++++.+..  .     
T Consensus        79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~  158 (681)
T 2pzi_A           79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV  158 (681)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence            368999999999999999999875  58999999987532 2344566777654      777777765443  1     


Q ss_pred             HHHhhccccCCCccc----CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhcccc
Q 006915          468 FVREMKTFSDPTLSA----LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQ  543 (626)
Q Consensus       468 ~~~~~~~~~~~~l~~----~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  543 (626)
                      ++.+++++.++++..    .+++.+++.|+.||+.||.|||+.+   |+||||||+|||++.+ .+||+|||++..+...
T Consensus       159 ~~lv~E~~~g~~L~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---iiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~  234 (681)
T 2pzi_A          159 GYIVMEYVGGQSLKRSKGQKLPVAEAIAYLLEILPALSYLHSIG---LVYNDLKPENIMLTEE-QLKLIDLGAVSRINSF  234 (681)
T ss_dssp             EEEEEECCCCEECC----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECSS-CEEECCCTTCEETTCC
T ss_pred             eEEEEEeCCCCcHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCC---CeecccChHHeEEeCC-cEEEEecccchhcccC
Confidence            345677776666544    4789999999999999999999998   9999999999999986 8999999998321110


Q ss_pred             c--------------------------------------------cCCCC---C--hHHHHHHHHHHHHhcccCCCCCCC
Q 006915          544 K--------------------------------------------LHASS---K--PNEILKCINVGLLCVQEDPNDRPT  574 (626)
Q Consensus       544 ~--------------------------------------------~~~~~---~--~~~~~~~~~~~~~C~~~~p~~RPs  574 (626)
                      .                                            .....   .  ......+..++..|++.||.+||+
T Consensus       235 ~~~~gt~~y~aPE~~~~~~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~  314 (681)
T 2pzi_A          235 GYLYGTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDLPTRNGRYVDGLPEDDPVLKTYDSYGRLLRRAIDPDPRQRFT  314 (681)
T ss_dssp             SCCCCCTTTSCTTHHHHCSCHHHHHHHHHHHHHHHHSCCCEETTEECSSCCTTCHHHHHCHHHHHHHHHHTCSSGGGSCS
T ss_pred             CccCCCccccCHHHHcCCCCCceehhhhHHHHHHHHhCCCCCcccccccccccccccccCHHHHHHHhhhccCChhhCCC
Confidence            0                                            00000   0  011245678888999999999995


Q ss_pred             -HHHHHHHhccc
Q 006915          575 -MSDVVIMLGSE  585 (626)
Q Consensus       575 -~~~vl~~L~~~  585 (626)
                       +.++...|...
T Consensus       315 ~~~~l~~~l~~~  326 (681)
T 2pzi_A          315 TAEEMSAQLTGV  326 (681)
T ss_dssp             SHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence             55566666554

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.78  E-value=9.8e-20  Score=188.33  Aligned_cols=133  Identities=20%  Similarity=0.190  Sum_probs=97.9

Q ss_pred             hcCccccccccccCeEEEEEEEcCCCcEEEEEEecCCC--------cccHHHHHHHHH---------------hccccce
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSAS--------GQGLEEFKNEIE---------------TSNSNAT  460 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~--------~~~~~~~~~e~~---------------~~~~~~~  460 (626)
                      .++|.+.+.||+|+||.||+|+. +++.||||++....        ....+.+.+|+.               ++|++.+
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l   97 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL   97 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred             cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence            45688899999999999999998 68999999997542        122355555544               3344444


Q ss_pred             ec---------chHHHHH-----------------------HhhccccCCCcc-----cCCCHHHHHHHHHHHHHHHHHH
Q 006915          461 IG---------ANVKAFV-----------------------REMKTFSDPTLS-----ALLHWEMRFNIIIGIARGLLYL  503 (626)
Q Consensus       461 ~~---------~~~~~~~-----------------------~~~~~~~~~~l~-----~~l~~~~~~~i~~~ia~gL~yL  503 (626)
                      .+         .++..++                       .++++..++++.     ..+++..+..++.||+.||.||
T Consensus        98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~~~~~~~~~~i~~qi~~aL~~l  177 (336)
T 2vuw_A           98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVA  177 (336)
T ss_dssp             EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred             cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence            33         2222222                       223444444322     3467899999999999999999


Q ss_pred             H-hCCCCceEecCCCCCCeEECCCC--------------------cEEEEecCcchhc
Q 006915          504 H-QDSRLRIIHRDLKTSNILLDQEM--------------------NPKISDFGLALDM  540 (626)
Q Consensus       504 H-~~~~~~ivHrDlkp~NILl~~~~--------------------~~kl~DFGla~~~  540 (626)
                      | +.+   |+||||||+||||+.++                    .+||+|||+|+.+
T Consensus       178 H~~~~---ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~  232 (336)
T 2vuw_A          178 EASLR---FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLE  232 (336)
T ss_dssp             HHHHC---CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEE
T ss_pred             HHhCC---EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEec
Confidence            9 888   99999999999999887                    8999999999644

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.75  E-value=4.8e-19  Score=189.73  Aligned_cols=128  Identities=27%  Similarity=0.287  Sum_probs=87.5

Q ss_pred             CccccccccccCeEEEEEEEcCCCcEEEEEEecCCCcc---cHHHHHHHH-HhccccceecchHH--HHHHhhccccCCC
Q 006915          406 NFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQ---GLEEFKNEI-ETSNSNATIGANVK--AFVREMKTFSDPT  479 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~---~~~~~~~e~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~  479 (626)
                      .|...+.||+|+||+||.+...+|+.||||++......   .+.+...++ .++|++++.+....  .++.+++++. ++
T Consensus        16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gs   94 (434)
T 2rio_A           16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LN   94 (434)
T ss_dssp             CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGGHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EE
T ss_pred             eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHHHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CC
Confidence            45556889999999998766667999999998753211   111222233 46888887754332  1223334332 23


Q ss_pred             cccCC-------------CHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCC-------------CcEEEEe
Q 006915          480 LSALL-------------HWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQE-------------MNPKISD  533 (626)
Q Consensus       480 l~~~l-------------~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~-------------~~~kl~D  533 (626)
                      +..++             .+..++.++.||+.||+|||+.+   |+||||||+|||++.+             +.+||+|
T Consensus        95 L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~D  171 (434)
T 2rio_A           95 LQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISD  171 (434)
T ss_dssp             HHHHHHTC------------CCHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECC
T ss_pred             HHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCcccccccccCCCceEEEEcc
Confidence            32221             22234679999999999999998   9999999999999654             4899999


Q ss_pred             cCcc
Q 006915          534 FGLA  537 (626)
Q Consensus       534 FGla  537 (626)
                      ||++
T Consensus       172 FG~a  175 (434)
T 2rio_A          172 FGLC  175 (434)
T ss_dssp             CTTC
T ss_pred             cccc
Confidence            9987

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.73  E-value=7.4e-19  Score=187.87  Aligned_cols=130  Identities=25%  Similarity=0.300  Sum_probs=90.9

Q ss_pred             hcCccccccccccCeEEEEEEEcCCCcEEEEEEecCCCcc---cHHHHHHHH-HhccccceecchHH--HHHHhhccccC
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQ---GLEEFKNEI-ETSNSNATIGANVK--AFVREMKTFSD  477 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~---~~~~~~~e~-~~~~~~~~~~~~~~--~~~~~~~~~~~  477 (626)
                      ..+|...+.||+|+||+||.....+++.||||++......   .+.++.+++ .++|++++++....  .++.+++++. 
T Consensus        23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-  101 (432)
T 3p23_A           23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-  101 (432)
T ss_dssp             TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-
T ss_pred             cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-
Confidence            4468888999999999965544557899999999754322   233344555 57888888765432  1122233332 


Q ss_pred             CCccc-------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECC-----CCcEEEEecCcc
Q 006915          478 PTLSA-------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQ-----EMNPKISDFGLA  537 (626)
Q Consensus       478 ~~l~~-------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~-----~~~~kl~DFGla  537 (626)
                      +++..       .+.+...+.++.||+.||.|||+.+   |+||||||+|||++.     ...+||+|||++
T Consensus       102 g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a  170 (432)
T 3p23_A          102 ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLN---IVHRDLKPHNILISMPNAHGKIKAMISDFGLC  170 (432)
T ss_dssp             EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTT---CCCCCCSTTSEEECCCBTTTBCCEEECCTTEE
T ss_pred             CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCc---CEeCCCCHHHEEEecCCCCCceeEEEecccce
Confidence            22221       1233456789999999999999998   999999999999943     346889999997

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.73  E-value=3e-18  Score=172.33  Aligned_cols=139  Identities=16%  Similarity=0.138  Sum_probs=104.9

Q ss_pred             HHHHHHhhcCccccccccccCeEEEEEEEcCCCcEEEEEEecCCCc------------------ccHHHHHHHHHhccc-
Q 006915          397 FESILAATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASG------------------QGLEEFKNEIETSNS-  457 (626)
Q Consensus       397 ~~~l~~~~~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~------------------~~~~~~~~e~~~~~~-  457 (626)
                      +..+......|.+.+.||+|+||.||+|+..+++.||||.++....                  .....+.+|+..... 
T Consensus        82 l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l  161 (282)
T 1zar_A           82 LHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL  161 (282)
T ss_dssp             HHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhc
Confidence            3445555666778899999999999999997799999999974321                  124457777765321 


Q ss_pred             --cceecchH-HHHHHhhccccCCCcccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEec
Q 006915          458 --NATIGANV-KAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDF  534 (626)
Q Consensus       458 --~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DF  534 (626)
                        +.+.+... ..++.+++++.++++.. +.......++.||+.||.|||+.+   |+||||||+|||++ ++.+||+||
T Consensus       162 ~~~~v~~~~~~~~~~lvmE~~~g~~L~~-l~~~~~~~i~~qi~~~l~~lH~~g---iiHrDlkp~NILl~-~~~vkl~DF  236 (282)
T 1zar_A          162 QGLAVPKVYAWEGNAVLMELIDAKELYR-VRVENPDEVLDMILEEVAKFYHRG---IVHGDLSQYNVLVS-EEGIWIIDF  236 (282)
T ss_dssp             TTSSSCCEEEEETTEEEEECCCCEEGGG-CCCSCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEEE-TTEEEECCC
T ss_pred             cCCCcCeEEeccceEEEEEecCCCcHHH-cchhhHHHHHHHHHHHHHHHHHCC---CEeCCCCHHHEEEE-CCcEEEEEC
Confidence              33332211 13345677777888887 665666789999999999999998   99999999999999 999999999


Q ss_pred             Ccchhc
Q 006915          535 GLALDM  540 (626)
Q Consensus       535 Gla~~~  540 (626)
                      |+|...
T Consensus       237 G~a~~~  242 (282)
T 1zar_A          237 PQSVEV  242 (282)
T ss_dssp             TTCEET
T ss_pred             CCCeEC
Confidence            999644

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.73  E-value=8.8e-19  Score=194.00  Aligned_cols=130  Identities=30%  Similarity=0.382  Sum_probs=99.9

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCC-CcccHHHHHHHHHh------ccccceecchHH--------HH
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSA-SGQGLEEFKNEIET------SNSNATIGANVK--------AF  468 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~-~~~~~~~~~~e~~~------~~~~~~~~~~~~--------~~  468 (626)
                      ++|.+.+.||+|+||.||+|... +++.||||++... .....+.+.+|++.      +|++.+.+....        .+
T Consensus        14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~   93 (676)
T 3qa8_A           14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP   93 (676)
T ss_dssp             ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred             CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence            67999999999999999999884 5899999998754 33345566667654      777777654321        22


Q ss_pred             HHhhccccCCCccc---------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCc---EEEEecCc
Q 006915          469 VREMKTFSDPTLSA---------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMN---PKISDFGL  536 (626)
Q Consensus       469 ~~~~~~~~~~~l~~---------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~---~kl~DFGl  536 (626)
                      +.+++++.++++..         .+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.   +||+|||+
T Consensus        94 ~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~g---IVHrDLKP~NILl~~~g~~~~vKL~DFG~  170 (676)
T 3qa8_A           94 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGY  170 (676)
T ss_dssp             CCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTT---BCCCCCCSTTEEEECCSSSCEEEECSCCC
T ss_pred             EEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEeecCCCceeEEEccccc
Confidence            34566666655532         3778889999999999999999998   999999999999987665   99999998


Q ss_pred             c
Q 006915          537 A  537 (626)
Q Consensus       537 a  537 (626)
                      +
T Consensus       171 a  171 (676)
T 3qa8_A          171 A  171 (676)
T ss_dssp             C
T ss_pred             c
Confidence            8

>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1

Probab=99.66  E-value=1.9e-16  Score=154.37  Aligned_cols=121  Identities=10%  Similarity=0.074  Sum_probs=81.5

Q ss_pred             CCcccEEEEeCCCCceEEeeCCCCCccc----------ccCccccCc-ceEEEccCCCCCCCccEEEEEc-CCCceeEEe
Q 006915            1 MDSGNFVLQDDQVRKNLWESFKYPTDTF----------LAGMYMGEN-LSLTSWAGHDDPKPGNFTFKMD-QGENQYQIT   68 (626)
Q Consensus         1 ldsGNlvl~~~~~~~~lWqSFd~PtDTl----------lpgq~l~~~-~~L~S~~s~~d~s~G~~~l~~~-~~~~~~~~~   68 (626)
                      +|+|||||++.    ++||||||||||+          +|||+++.+ +.|+   +.+||++|.|+|+|+ +|  +++++
T Consensus        95 ~d~Gnlvl~~~----~~W~S~~~p~~t~~lp~~g~d~L~~gq~~~~~~~~L~---s~~d~s~G~~~l~l~~dG--~LvL~  165 (236)
T 1dlp_A           95 QPDRTVTIYGP----GLWDSGTSNKGSVVVANNGNSILYSTQGNDNHPQTLH---ATQSLQLSPYRLSMETDC--NLVLF  165 (236)
T ss_dssp             CSSSCEEEECS----EEEECSCCCSSCCCCSSCCCEECCCC--CCCCCCEEC---SSCCCBCSSCEEEEETTT--EEEEE
T ss_pred             eCCCCEEEecC----CEEECCCCCCcccccCCccceEEecCCcCCCccceEE---cCcEeecCcEEEEECCCC--cEEEE
Confidence            59999999952    7999999998554          777766654 3576   478999999999999 66  56777


Q ss_pred             cCCeeEEeeCCcCCccccccccccceece--eeeeeeeecCCCCceeEEEEEecCCCceeEEEEEeecccEEEEE
Q 006915           69 KPLIRHWRSAESKDVFSSNEIIPYQILNL--LSNFSHSVKPTGKNAVHPNLIVPSIDYSRTRLIMNYTGEIQYWT  141 (626)
Q Consensus        69 ~~~~~yw~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rl~l~~dG~l~~~~  141 (626)
                      ++..+||++++|.+.       +...+.+  ...+.....  .....+.++...+  ...+|++|++||++++|.
T Consensus       166 ~~~~~~W~s~~~~~~-------~~~~~~L~~~Gnl~ly~~--~~~~vw~s~~~~~--~~~~rl~Ld~dG~l~ly~  229 (236)
T 1dlp_A          166 DRDDRVWSTNTAGKG-------TGCRAVLQPNGRMDVLTN--QNIAVWTSGNSRS--AGRYVFVLQPDRNLAIYG  229 (236)
T ss_dssp             BTTBCCSCCCCCSSC-------SSCEEEEETTTEEEEEET--TTEEEEECCCCCS--SSCCEEEECSSSCEEEEC
T ss_pred             cCCEeEEeCCCcCCC-------CceEEEECCCCcEEEEeC--CCcEEEEeCCCCC--CCCEEEEEcCCCcEEEeC
Confidence            777899999998653       2223333  111111122  1334444443332  245899999999999984

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.58  E-value=1.5e-16  Score=175.41  Aligned_cols=127  Identities=20%  Similarity=0.193  Sum_probs=88.0

Q ss_pred             ccccccCeEEEEEEEc-CCCcEEEEEEecCCC----------cccHHHHHHHHHh-------ccccceecchHH--HHHH
Q 006915          411 NKLGKGGFGPVYKAKF-PGGQQIAVKRLSSAS----------GQGLEEFKNEIET-------SNSNATIGANVK--AFVR  470 (626)
Q Consensus       411 ~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~----------~~~~~~~~~e~~~-------~~~~~~~~~~~~--~~~~  470 (626)
                      ..++.|++|.+..++. --|+.+|||.+....          ....++|.+|++.       .|+++++.+...  .++.
T Consensus       240 ~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yL  319 (569)
T 4azs_A          240 NQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWL  319 (569)
T ss_dssp             CC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEE
T ss_pred             hccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEE
Confidence            3567777777766543 348899999997531          2335678888875       567777655433  4567


Q ss_pred             hhccccCCCcccCCCH---HHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhc
Q 006915          471 EMKTFSDPTLSALLHW---EMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM  540 (626)
Q Consensus       471 ~~~~~~~~~l~~~l~~---~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~  540 (626)
                      +||+..+++|.+.|..   ....+|+.||+.||+|||+++   ||||||||+||||++++.+||+|||+|+.+
T Consensus       320 VMEyv~G~~L~d~i~~~~~l~~~~I~~QIl~AL~ylH~~G---IIHRDIKPeNILL~~dg~vKL~DFGlAr~~  389 (569)
T 4azs_A          320 VMEKLPGRLLSDMLAAGEEIDREKILGSLLRSLAALEKQG---FWHDDVRPWNVMVDARQHARLIDFGSIVTT  389 (569)
T ss_dssp             EEECCCSEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTT---CEESCCCGGGEEECTTSCEEECCCTTEESC
T ss_pred             EEecCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHCC---ceeccCchHhEEECCCCCEEEeecccCeeC
Confidence            8888888877654310   011358999999999999998   999999999999999999999999998544

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.58  E-value=1.1e-15  Score=167.49  Aligned_cols=125  Identities=18%  Similarity=0.213  Sum_probs=89.4

Q ss_pred             ccccccccCeEEEEEEEcCCCcEEEEEEecCCCcc--------cHHHHHHHHH------hcccc--ceecchHHHHHHhh
Q 006915          409 EANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQ--------GLEEFKNEIE------TSNSN--ATIGANVKAFVREM  472 (626)
Q Consensus       409 ~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~--------~~~~~~~e~~------~~~~~--~~~~~~~~~~~~~~  472 (626)
                      ..+.||+|+||.||+|+. .++.+|+|+.......        ..+.+.+|++      ++|++  ..........+.++
T Consensus       340 ~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVm  418 (540)
T 3en9_A          340 PEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMM  418 (540)
T ss_dssp             --------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEE
T ss_pred             CCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEE
Confidence            357899999999999965 4688999987542211        1234566654      46777  44443333455677


Q ss_pred             ccccCCCcccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhcc
Q 006915          473 KTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMM  541 (626)
Q Consensus       473 ~~~~~~~l~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~  541 (626)
                      +++.++++.+++..  ++.++.|+++||.|||+++   |+||||||+|||++.  .+||+|||+++.+.
T Consensus       419 E~~~ggsL~~~l~~--~~~i~~qi~~aL~~LH~~g---IiHrDiKp~NILl~~--~~kL~DFGla~~~~  480 (540)
T 3en9_A          419 SYINGKLAKDVIED--NLDIAYKIGEIVGKLHKND---VIHNDLTTSNFIFDK--DLYIIDFGLGKISN  480 (540)
T ss_dssp             ECCCSEEHHHHSTT--CTHHHHHHHHHHHHHHHTT---EECTTCCTTSEEESS--SEEECCCTTCEECC
T ss_pred             ECCCCCCHHHHHHH--HHHHHHHHHHHHHHHHHCc---CccCCCCHHHEEECC--eEEEEECccCEECC
Confidence            88888888777765  6789999999999999998   999999999999999  99999999996543

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.58  E-value=1.3e-15  Score=151.11  Aligned_cols=128  Identities=19%  Similarity=0.148  Sum_probs=87.0

Q ss_pred             CccccccccccCeEEEEEEEc-CCCcE--EEEEEecCCCcc------------------------cHHHHHHHHHh----
Q 006915          406 NFSEANKLGKGGFGPVYKAKF-PGGQQ--IAVKRLSSASGQ------------------------GLEEFKNEIET----  454 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~-~~~~~--vAvK~l~~~~~~------------------------~~~~~~~e~~~----  454 (626)
                      -|.+.+.||+|+||.||+|.. .+|+.  ||||.++.....                        ....+.+|+..    
T Consensus        48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l  127 (258)
T 1zth_A           48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA  127 (258)
T ss_dssp             EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred             chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence            367788999999999999998 67888  999987542111                        01234555443    


Q ss_pred             --cc--ccceecchHHHHHHhhccccC-C----CcccC---CCHHHHHHHHHHHHHHHHHHH-hCCCCceEecCCCCCCe
Q 006915          455 --SN--SNATIGANVKAFVREMKTFSD-P----TLSAL---LHWEMRFNIIIGIARGLLYLH-QDSRLRIIHRDLKTSNI  521 (626)
Q Consensus       455 --~~--~~~~~~~~~~~~~~~~~~~~~-~----~l~~~---l~~~~~~~i~~~ia~gL~yLH-~~~~~~ivHrDlkp~NI  521 (626)
                        .+  ....+..  ...+.+|+++.. +    .+...   +++.....++.|++.||.||| +.+   |+||||||+||
T Consensus       128 ~~~~i~~p~~~~~--~~~~lVmE~~g~~g~~~~~L~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~g---ivHrDlkp~NI  202 (258)
T 1zth_A          128 KEAGVSVPQPYTY--MKNVLLMEFIGEDELPAPTLVELGRELKELDVEGIFNDVVENVKRLYQEAE---LVHADLSEYNI  202 (258)
T ss_dssp             HHTTCCCCCEEEE--ETTEEEEECCEETTEECCBHHHHGGGGGGSCHHHHHHHHHHHHHHHHHTSC---EECSSCSTTSE
T ss_pred             HhCCCCCCeEEEc--CCCEEEEEecCCCCCccccHHHHhhccChHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHE
Confidence              21  1222211  122234555521 2    22221   113356789999999999999 887   99999999999


Q ss_pred             EECCCCcEEEEecCcchhc
Q 006915          522 LLDQEMNPKISDFGLALDM  540 (626)
Q Consensus       522 Ll~~~~~~kl~DFGla~~~  540 (626)
                      |++.  .++|+|||+|...
T Consensus       203 Ll~~--~~~liDFG~a~~~  219 (258)
T 1zth_A          203 MYID--KVYFIDMGQAVTL  219 (258)
T ss_dssp             EESS--SEEECCCTTCEET
T ss_pred             EEcC--cEEEEECcccccC
Confidence            9998  9999999999654

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.53  E-value=4.4e-15  Score=153.37  Aligned_cols=136  Identities=17%  Similarity=0.148  Sum_probs=96.0

Q ss_pred             HHHhhcCccccccccccCeEEEEEEEcCCCcEEEEEEecCCCc--------------ccH------HHHHHHHHhccccc
Q 006915          400 ILAATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASG--------------QGL------EEFKNEIETSNSNA  459 (626)
Q Consensus       400 l~~~~~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~--------------~~~------~~~~~e~~~~~~~~  459 (626)
                      +..-..-|.+.+.||+|+||.||+|...+|+.||||.++....              ...      ..+..+.++.++.+
T Consensus        90 L~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~r  169 (397)
T 4gyi_A           90 HAARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKA  169 (397)
T ss_dssp             HHHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHH
Confidence            3333334889999999999999999998999999998763210              001      11222333444444


Q ss_pred             eecchHH--------HHHHhhccccCCCcccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCC----
Q 006915          460 TIGANVK--------AFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEM----  527 (626)
Q Consensus       460 ~~~~~~~--------~~~~~~~~~~~~~l~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~----  527 (626)
                      +....+.        ..+.+|++..+..+..+........++.||+.+|.|||..+   ||||||||.|||+++++    
T Consensus       170 L~~~gv~vp~p~~~~~~~LVME~i~G~~L~~l~~~~~~~~l~~qll~~l~~lH~~g---IVHrDLKp~NILl~~dgd~~d  246 (397)
T 4gyi_A          170 LYEEGFPVPEPIAQSRHTIVMSLVDALPMRQVSSVPDPASLYADLIALILRLAKHG---LIHGDFNEFNILIREEKDAED  246 (397)
T ss_dssp             HHHTTCSCCCEEEEETTEEEEECCSCEEGGGCCCCSCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEEEEEECSSC
T ss_pred             HHhcCCCCCeeeeccCceEEEEecCCccHhhhcccHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeCCCCccc
Confidence            3322111        12245677777677666665556678999999999999998   99999999999998776    


Q ss_pred             ------cEEEEecCcch
Q 006915          528 ------NPKISDFGLAL  538 (626)
Q Consensus       528 ------~~kl~DFGla~  538 (626)
                            .+.|+||+-+.
T Consensus       247 ~~~~~~~~~iID~~Q~V  263 (397)
T 4gyi_A          247 PSSITLTPIIIXFPQMV  263 (397)
T ss_dssp             TTSEEEEEEECCCTTCE
T ss_pred             ccccccceEEEEeCCcc
Confidence                  38999999773

>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A

Probab=98.72  E-value=1.8e-08  Score=85.38  Aligned_cols=53  Identities=17%  Similarity=0.389  Sum_probs=38.9

Q ss_pred             CCcccEEEEeCCCCceEEeeCCCCCcccccCccccCcceEEEccCCCCCCCccEEEEEc-CCCceeEEec-CCeeEEeeC
Q 006915            1 MDSGNFVLQDDQVRKNLWESFKYPTDTFLAGMYMGENLSLTSWAGHDDPKPGNFTFKMD-QGENQYQITK-PLIRHWRSA   78 (626)
Q Consensus         1 ldsGNlvl~~~~~~~~lWqSFd~PtDTllpgq~l~~~~~L~S~~s~~d~s~G~~~l~~~-~~~~~~~~~~-~~~~yw~~~   78 (626)
                      +|+|||||+| + +.++||||                         +++++|.|++.|+ +|.  ++++. ...+||+++
T Consensus        57 ~~~GNLvl~d-~-~~~~W~S~-------------------------~~~~~g~~~l~l~~dGn--lvl~~~~~~~~W~S~  107 (112)
T 1xd5_A           57 QNDGNLVIYS-G-SRAIWASN-------------------------TNRQNGNYYLILQRDRN--VVIYDNSNNAIWATH  107 (112)
T ss_dssp             CTTSCEEEEE-T-TEEEEECC-------------------------CCCSCCCCEEEECTTSC--EEEECTTSCEEEECC
T ss_pred             eCCCCEEEEc-C-CEEEEECC-------------------------ccCCCCCEEEEEeCCCc--EEEECCCCceEEECC
Confidence            3677777777 4 56777777                         4567789999999 676  33443 577999999


Q ss_pred             CcCC
Q 006915           79 ESKD   82 (626)
Q Consensus        79 ~~~~   82 (626)
                      +|++
T Consensus       108 ~~~g  111 (112)
T 1xd5_A          108 TNVG  111 (112)
T ss_dssp             CCCC
T ss_pred             CccC
Confidence            9976

>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1

Probab=98.64  E-value=4.4e-08  Score=83.81  Aligned_cols=50  Identities=16%  Similarity=0.334  Sum_probs=36.0

Q ss_pred             CCcccEEEEeCCCCceEEeeCCCCCcccccCccccCcceEEEccCCCCCCCccEEEEEc-CCCceeEEecCCeeEEeeCC
Q 006915            1 MDSGNFVLQDDQVRKNLWESFKYPTDTFLAGMYMGENLSLTSWAGHDDPKPGNFTFKMD-QGENQYQITKPLIRHWRSAE   79 (626)
Q Consensus         1 ldsGNlvl~~~~~~~~lWqSFd~PtDTllpgq~l~~~~~L~S~~s~~d~s~G~~~l~~~-~~~~~~~~~~~~~~yw~~~~   79 (626)
                      +|+|||||+|.+ +.+|||||                         ++|++|.|++.|+ +|+  ++++.  ..||++++
T Consensus        68 ~~dGNLVl~d~~-~~~lW~S~-------------------------~~~~~g~~~l~l~~~Gn--lvl~~--~~~W~Sg~  117 (119)
T 1b2p_A           68 QPDGVLVVITNE-NVTVWQSP-------------------------VAGKAGHYVLVLQPDRN--VVIYG--DALWATQT  117 (119)
T ss_dssp             CTTSCEEEECTT-CCEEEECS-------------------------CCCCSSCEEEEECTTSC--EEEEE--SEEEECCC
T ss_pred             ccCCEEEEEeCC-CcEEEcCC-------------------------CCCCCCCEEEEEECCCc--EEEEC--ccEeCCCC
Confidence            467777777754 56777777                         5678899999999 676  33444  38999885


Q ss_pred             c
Q 006915           80 S   80 (626)
Q Consensus        80 ~   80 (626)
                      -
T Consensus       118 ~  118 (119)
T 1b2p_A          118 V  118 (119)
T ss_dssp             C
T ss_pred             C
Confidence            3

>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*

Probab=98.64  E-value=4.2e-08  Score=82.76  Aligned_cols=34  Identities=15%  Similarity=0.454  Sum_probs=24.8

Q ss_pred             ccCCCCCCCccEEEEEc-CCCceeEEecCCeeEEeeCCc
Q 006915           43 WAGHDDPKPGNFTFKMD-QGENQYQITKPLIRHWRSAES   80 (626)
Q Consensus        43 ~~s~~d~s~G~~~l~~~-~~~~~~~~~~~~~~yw~~~~~   80 (626)
                      |.|.+++++|.|++.|+ +|+  ++++.+  .||+++++
T Consensus        74 W~S~t~~~~g~~~l~l~~dGn--lvl~~~--~~W~S~~~  108 (110)
T 3a0c_A           74 WQTKTNGKEDHYVLVLQQDRN--VVIYGP--VVWATGSG  108 (110)
T ss_dssp             EECCCCCSSSCCEEEECTTSC--EEEECS--EEEECSCC
T ss_pred             EecCCCCCCCCEEEEEeCCcc--EEEECC--CEecCCCc
Confidence            44446778899999999 676  344444  79998865

>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A*

Probab=98.63  E-value=4.3e-08  Score=83.50  Aligned_cols=53  Identities=21%  Similarity=0.529  Sum_probs=39.8

Q ss_pred             CCcccEEEEeCCCCceEEeeCCCCCcccccCccccCcceEEEccCCCCCCCccEEEEEc-CCCceeEEecCCeeEEeeCC
Q 006915            1 MDSGNFVLQDDQVRKNLWESFKYPTDTFLAGMYMGENLSLTSWAGHDDPKPGNFTFKMD-QGENQYQITKPLIRHWRSAE   79 (626)
Q Consensus         1 ldsGNlvl~~~~~~~~lWqSFd~PtDTllpgq~l~~~~~L~S~~s~~d~s~G~~~l~~~-~~~~~~~~~~~~~~yw~~~~   79 (626)
                      +|+|||||+|.+ +.++||||++                         +++|.|++.++ +|+  +.++..  .||++++
T Consensus        58 ~~~GnLvl~d~~-~~~vW~S~~~-------------------------~~~g~~~l~l~~dGn--lvl~~~--~~W~S~~  107 (115)
T 2dpf_A           58 LSDGNLVIYDHN-NNDVWGSACW-------------------------GDNGKYALVLQKDGR--FVIYGP--VLWSLGP  107 (115)
T ss_dssp             CTTSCEEEECTT-CCEEEECCCC-------------------------CSSSCCEEEECTTSC--EEEECS--EEECSST
T ss_pred             CCCCcEEEECCC-ceEEEEcCCC-------------------------CCCCCEEEEEeCCCe--EEEECC--CEEECCC
Confidence            467888888764 6778888876                         46788999999 776  444443  8999999


Q ss_pred             cCCc
Q 006915           80 SKDV   83 (626)
Q Consensus        80 ~~~~   83 (626)
                      |...
T Consensus       108 ~~~~  111 (115)
T 2dpf_A          108 NGCR  111 (115)
T ss_dssp             TCBC
T ss_pred             CCCc
Confidence            9754

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=98.49  E-value=6.1e-08  Score=95.66  Aligned_cols=136  Identities=15%  Similarity=0.041  Sum_probs=88.2

Q ss_pred             HHhhcCccccccccccCeEEEEEEEcCCCcEEEEEEecCCCcccHHHHHHHHHh-------ccccceecchHH--HHHHh
Q 006915          401 LAATDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIET-------SNSNATIGANVK--AFVRE  471 (626)
Q Consensus       401 ~~~~~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~e~~~-------~~~~~~~~~~~~--~~~~~  471 (626)
                      .....+|.....++.|+++.||+.... ++.+++|............+.+|++.       ..+.++++....  ..+..
T Consensus        10 ~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv   88 (263)
T 3tm0_A           10 KKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLL   88 (263)
T ss_dssp             HHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEE
T ss_pred             HHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEE
Confidence            344567888888999999999999864 68999999874211122234445443       122233322111  11234


Q ss_pred             hccccCCCcccCC-CHHHHHHHHHHHHHHHHHHHhC--------------------------------------------
Q 006915          472 MKTFSDPTLSALL-HWEMRFNIIIGIARGLLYLHQD--------------------------------------------  506 (626)
Q Consensus       472 ~~~~~~~~l~~~l-~~~~~~~i~~~ia~gL~yLH~~--------------------------------------------  506 (626)
                      |++..+.++...+ +......++.+++++|..||+.                                            
T Consensus        89 ~e~i~G~~l~~~~~~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (263)
T 3tm0_A           89 MSEADGVLCSEEYEDEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPR  168 (263)
T ss_dssp             EECCSSEEHHHHCCTTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHH
T ss_pred             EEecCCeehhhccCCcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHH
Confidence            5555555544321 2233457889999999999982                                            


Q ss_pred             ------------CCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          507 ------------SRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       507 ------------~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                                  ..+.++|+|++|.|||++++..+.|+||+.+
T Consensus       169 ~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a  211 (263)
T 3tm0_A          169 ELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRS  211 (263)
T ss_dssp             HHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTC
T ss_pred             HHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhc
Confidence                        1145899999999999987666789999987

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=98.38  E-value=5e-08  Score=95.94  Aligned_cols=128  Identities=16%  Similarity=0.087  Sum_probs=79.3

Q ss_pred             cCccccccccccCeEEEEEEEcCCCcEEEEEEecCCCcccHHHHHHHHHh------cc--ccceecchHH--HHHHhhcc
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIET------SN--SNATIGANVK--AFVREMKT  474 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~--~~~~~~~~~~--~~~~~~~~  474 (626)
                      .++.+....+.|..+.||+....+|..++||.......   ..+..|+..      ..  +.+++.....  ..+..+++
T Consensus        20 ~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~~~---~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~   96 (264)
T 1nd4_A           20 FGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGAL---NELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGE   96 (264)
T ss_dssp             TTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSCTT---SCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEEC
T ss_pred             CCCceEecccCCCCceEEEEecCCCCeEEEEeCCcccc---hhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEe
Confidence            34444333345666999999887788899999765321   223333322      21  2223322111  11234555


Q ss_pred             ccCCCcccCCCHHHHHHHHHHHHHHHHHHHhCC-----------------------------------------------
Q 006915          475 FSDPTLSALLHWEMRFNIIIGIARGLLYLHQDS-----------------------------------------------  507 (626)
Q Consensus       475 ~~~~~l~~~l~~~~~~~i~~~ia~gL~yLH~~~-----------------------------------------------  507 (626)
                      ..+..+.  ........++.++++.|..||...                                               
T Consensus        97 i~G~~l~--~~~~~~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  174 (264)
T 1nd4_A           97 VPGQDLL--SSHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARL  174 (264)
T ss_dssp             CSSEETT--TSCCCHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHH
T ss_pred             cCCcccC--cCcCCHhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHH
Confidence            5555553  222223467888999999999753                                               


Q ss_pred             --------CCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          508 --------RLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       508 --------~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                              +..++|+|++|.|||++++..++|+||+.+
T Consensus       175 ~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a  212 (264)
T 1nd4_A          175 KARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRL  212 (264)
T ss_dssp             HHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTC
T ss_pred             HHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhc
Confidence                    123999999999999988766789999997

>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0

Probab=98.08  E-value=1.2e-05  Score=67.81  Aligned_cols=99  Identities=13%  Similarity=0.132  Sum_probs=58.1

Q ss_pred             CcccccCccccCcceEEEccCCCCCCCccEEEEEc-CCCceeEEecCCeeEEeeCCcCCccccccccccceeceeeeeee
Q 006915           25 TDTFLAGMYMGENLSLTSWAGHDDPKPGNFTFKMD-QGENQYQITKPLIRHWRSAESKDVFSSNEIIPYQILNLLSNFSH  103 (626)
Q Consensus        25 tDTllpgq~l~~~~~L~S~~s~~d~s~G~~~l~~~-~~~~~~~~~~~~~~yw~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (626)
                      .|||+|||.|..+..|++         |.|.|.|+ +|+..++-......||.++.....  .   ...........+..
T Consensus         6 ~~tL~~gq~L~~g~~L~~---------g~~~L~~q~dGNLvL~~~~~~~~vWssnt~~~~--~---~~~l~l~~dGNLVl   71 (113)
T 3mez_B            6 RNVLFSSQVMYDNAQLAT---------RDYSLVMRDDCNLVLTKGSKTNIVWESGTSGRG--Q---HCFMRLGHSGELDI   71 (113)
T ss_dssp             SSEEETTCEEETTCEEEE---------TTEEEEECTTSCEEEEETTTTEEEEECCCTTSC--S---SCEEEECTTSCEEE
T ss_pred             CCEeCCCCEECCCCEeEc---------CCEEEEEcCCCEEEEEECCCCEEEEECCcccCC--c---CEEEEEeCCCcEEE
Confidence            699999999999999963         89999999 777666532236789998654321  0   11111111112222


Q ss_pred             eecCCCCceeEEEEEecCCCceeEEEEEeecccEEEEE
Q 006915          104 SVKPTGKNAVHPNLIVPSIDYSRTRLIMNYTGEIQYWT  141 (626)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~rl~l~~dG~l~~~~  141 (626)
                      .+. . ....+.+- ... .....+++|+.||+|++|.
T Consensus        72 ~d~-~-~~~iW~S~-t~~-~~~~~~~~L~~dGnlvly~  105 (113)
T 3mez_B           72 TDD-R-LNTVFVSN-TVG-QEGDYVLILQINGQAVVYG  105 (113)
T ss_dssp             ECT-T-SCEEEECS-CCC-SSSCCEEEECTTSCEEEEC
T ss_pred             ECC-C-CCEEEECC-CcC-CCCCEEEEEcCCceEEEec
Confidence            222 0 11222111 111 1123689999999999994

>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}

Probab=98.07  E-value=4.7e-06  Score=69.89  Aligned_cols=95  Identities=15%  Similarity=0.140  Sum_probs=55.1

Q ss_pred             CCcccccCccccCcceEEEccCCCCCCCccEEEEEc-CCCceeEEecCCeeEEeeCCcCCccccccccccceeceeeeee
Q 006915           24 PTDTFLAGMYMGENLSLTSWAGHDDPKPGNFTFKMD-QGENQYQITKPLIRHWRSAESKDVFSSNEIIPYQILNLLSNFS  102 (626)
Q Consensus        24 PtDTllpgq~l~~~~~L~S~~s~~d~s~G~~~l~~~-~~~~~~~~~~~~~~yw~~~~~~~~~~~~~~~~~~~~~~~~~~~  102 (626)
                      -+|||+|||.|..+..|         +.|.|.|.|+ +|+..++  .+   ||.++.....  .   ...........+.
T Consensus         2 ~~dtL~~gq~L~~g~~L---------~~g~~~L~~q~dGNLvl~--~~---~Wssnt~~~~--~---~~~l~l~~dGnLv   62 (109)
T 3r0e_A            2 GTNYLLSGQTLDTEGHL---------KNGDFDLVMQDDCNLVLY--NG---NWQSNTANNG--R---DCKLTLTDYGELV   62 (109)
T ss_dssp             CCSEEETTCEECTTCEE---------EETTEEEEECTTSCEEEE--TT---TEECCCTTSC--S---SCEEEECTTSCEE
T ss_pred             ccCCcCCCCCcCCCCEe---------ECCCEEEEEecCCeEEEE--eC---eEEcCCCCCC--C---cEEEEEcCCCeEE
Confidence            37999999999999999         3599999999 7776654  32   7887654321  0   0111111111222


Q ss_pred             eeecCCCCceeEEEEEecCCCceeEEEEEeecccEEEEE
Q 006915          103 HSVKPTGKNAVHPNLIVPSIDYSRTRLIMNYTGEIQYWT  141 (626)
Q Consensus       103 ~~~~~~~~~~~~~~~~~~~~~~~~~rl~l~~dG~l~~~~  141 (626)
                      ..+. . ....+. ..... .....+++|+.||++++|.
T Consensus        63 l~d~-~-~~~vWs-s~t~~-~~~~~~~~L~~dGNlvly~   97 (109)
T 3r0e_A           63 IKNG-D-GSTVWK-SGAQS-VKGNYAAVVHPDGRLVVFG   97 (109)
T ss_dssp             EECT-T-SCEEEE-CCCCC-SSSCCEEEEETTTEEEEEC
T ss_pred             EEeC-C-CCEEEc-CCCcC-CCcCEEEEEcCCCeEEEEe
Confidence            2222 0 112221 11111 2235689999999999995

>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}

Probab=98.07  E-value=6.4e-06  Score=69.18  Aligned_cols=97  Identities=13%  Similarity=0.079  Sum_probs=56.8

Q ss_pred             CCcccccCccccCcceEEEccCCCCCCCccEEEEEc-CCCceeEEecCCeeEEeeCCcCCccccccccccceeceeeeee
Q 006915           24 PTDTFLAGMYMGENLSLTSWAGHDDPKPGNFTFKMD-QGENQYQITKPLIRHWRSAESKDVFSSNEIIPYQILNLLSNFS  102 (626)
Q Consensus        24 PtDTllpgq~l~~~~~L~S~~s~~d~s~G~~~l~~~-~~~~~~~~~~~~~~yw~~~~~~~~~~~~~~~~~~~~~~~~~~~  102 (626)
                      -+|||+|||.|..+.+|+|         |.|.|.|+ +|+..++  .. ..||.+......  .   ...........+.
T Consensus         5 ~~dtL~~gq~L~~g~~L~s---------g~~~L~~q~dGnLvl~--~~-~~vW~snt~~~~--~---~~~l~l~~dGNLv   67 (110)
T 3r0e_B            5 TNNLLFSGQVLYGDGRLTA---------KNHQLVMQGDCNLVLY--GG-KYGWQSNTHGNG--E---HCFLRLNHKGELI   67 (110)
T ss_dssp             BTTEEETTCEEETTEEEEC---------SSCEEEECTTSCEEEE--CS-SSCEECCCTTSS--S---SCEEEECTTSCEE
T ss_pred             ccCEECCCCEecCCCEEEe---------CCEEEEEcCCCeEEEE--CC-eEEEECCCcCCC--c---CEEEEEeCCCcEE
Confidence            3799999999999999985         67999999 7765553  33 589987654321  0   0011111111222


Q ss_pred             eeecCCCCceeEEEEEecCCCceeEEEEEeecccEEEEE
Q 006915          103 HSVKPTGKNAVHPNLIVPSIDYSRTRLIMNYTGEIQYWT  141 (626)
Q Consensus       103 ~~~~~~~~~~~~~~~~~~~~~~~~~rl~l~~dG~l~~~~  141 (626)
                      ..+.  .....+.+-.. . .....+++|..||+|++|.
T Consensus        68 l~d~--~~~~iW~S~t~-~-~~~~~~~~L~~dGNlvly~  102 (110)
T 3r0e_B           68 IKDD--DFKTIWSSRSS-S-KQGEYVLILQDDGFGVIYG  102 (110)
T ss_dssp             EECT--TCCEEEECCCC-C-SSSCCEEEECTTSCEEEEC
T ss_pred             EEeC--CCCEEEEcCCc-C-CCCCEEEEEcCCccEEEec
Confidence            2222  01222221111 1 1123689999999999995

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=98.05  E-value=3e-06  Score=87.66  Aligned_cols=128  Identities=16%  Similarity=0.165  Sum_probs=83.0

Q ss_pred             ccccccccCeEEEEEEEcCCCcEEEEEEec--CCC-cccHHHHHHHHHh--------ccccceecchHHH-----HHHhh
Q 006915          409 EANKLGKGGFGPVYKAKFPGGQQIAVKRLS--SAS-GQGLEEFKNEIET--------SNSNATIGANVKA-----FVREM  472 (626)
Q Consensus       409 ~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~--~~~-~~~~~~~~~e~~~--------~~~~~~~~~~~~~-----~~~~~  472 (626)
                      ..+.|+.|.++.||+....+ ..+++|+..  ... ......+.+|...        ..+.+++..+...     .+.++
T Consensus        42 ~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm  120 (359)
T 3dxp_A           42 SVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM  120 (359)
T ss_dssp             EEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred             eEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence            35789999999999998854 678888876  321 1112334444443        1123333322211     22455


Q ss_pred             ccccCCCccc----CCCHHHHHHHHHHHHHHHHHHHhCC-----------------------------------------
Q 006915          473 KTFSDPTLSA----LLHWEMRFNIIIGIARGLLYLHQDS-----------------------------------------  507 (626)
Q Consensus       473 ~~~~~~~l~~----~l~~~~~~~i~~~ia~gL~yLH~~~-----------------------------------------  507 (626)
                      ++..+..+..    .++..++..++.++++.|..||...                                         
T Consensus       121 e~v~G~~l~~~~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (359)
T 3dxp_A          121 EFVSGRVLWDQSLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMDSL  200 (359)
T ss_dssp             ECCCCBCCCCTTCTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHHHH
T ss_pred             EecCCeecCCCccccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHHHH
Confidence            6666554422    3567888899999999999999831                                         


Q ss_pred             --------------CCceEecCCCCCCeEECCCCc--EEEEecCcc
Q 006915          508 --------------RLRIIHRDLKTSNILLDQEMN--PKISDFGLA  537 (626)
Q Consensus       508 --------------~~~ivHrDlkp~NILl~~~~~--~kl~DFGla  537 (626)
                                    ...++|+|++|.|||++.++.  +.|+||+.+
T Consensus       201 ~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a  246 (359)
T 3dxp_A          201 MDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELS  246 (359)
T ss_dssp             HHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTC
T ss_pred             HHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccc
Confidence                          256999999999999987753  689999988

>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0

Probab=98.00  E-value=9.9e-06  Score=68.14  Aligned_cols=99  Identities=9%  Similarity=-0.025  Sum_probs=57.6

Q ss_pred             CcccccCccccCcceEEEccCCCCCCCccEEEEEc-CCCceeEEecCCeeEEeeCCcCCccccccccccceeceeeeeee
Q 006915           25 TDTFLAGMYMGENLSLTSWAGHDDPKPGNFTFKMD-QGENQYQITKPLIRHWRSAESKDVFSSNEIIPYQILNLLSNFSH  103 (626)
Q Consensus        25 tDTllpgq~l~~~~~L~S~~s~~d~s~G~~~l~~~-~~~~~~~~~~~~~~yw~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (626)
                      +|||+|||.|..+..|.         .|.|+|.|+ +|+..++  .... +|.+......  .   ...........+.+
T Consensus         2 ~~~l~~gq~L~~g~~L~---------~g~~~L~~q~dGnLvl~--~~~~-vW~snt~~~~--~---~~~l~l~~dGNLVl   64 (111)
T 3mez_A            2 NNVLLTGDVIHTDNQLS---------YESAAFVMQGDCNLVLY--NEAG-GFQSNTHGRG--V---DCTLRLNNRGQLEI   64 (111)
T ss_dssp             TTEEETTCEECTTCEEE---------ETTEEEEECTTSCEEEE--CSSC-CEECCCTTSC--S---SCEEEECTTSCEEE
T ss_pred             cCEeCCCCEeCCCCEEe---------cCCEEEEEccCCeEEEE--CCCC-EEECCcccCC--c---CEEEEEcCCCcEEE
Confidence            69999999999999993         489999999 7776654  3333 9987654321  0   01111111112222


Q ss_pred             eecCCCCceeEEEEEecCCCceeEEEEEeecccEEEEE
Q 006915          104 SVKPTGKNAVHPNLIVPSIDYSRTRLIMNYTGEIQYWT  141 (626)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~rl~l~~dG~l~~~~  141 (626)
                      .+. .+....+.+-..........+++|..||++++|.
T Consensus        65 ~~~-~~~~~vW~S~t~~~~~~~~~~l~Lq~dGNlvly~  101 (111)
T 3mez_A           65 HSA-NSNTPVWVYPRSVNTVRGNYAATLGPDQHVTIYG  101 (111)
T ss_dssp             ECS-SCSSCSEEESSSCCCCSSCCEEEECTTSCEEEEC
T ss_pred             EeC-CCCEEEEEeccccCCCCcCEEEEECCCCeEEEec
Confidence            222 0111234322211112245789999999999995

>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*

Probab=97.93  E-value=5.2e-05  Score=62.96  Aligned_cols=94  Identities=14%  Similarity=0.057  Sum_probs=57.7

Q ss_pred             cccccCccccCcceEEEccCCCCCCCccEEEEEc-CCCceeEEecCCeeEEeeCCcCCccccccccccceece--eeeee
Q 006915           26 DTFLAGMYMGENLSLTSWAGHDDPKPGNFTFKMD-QGENQYQITKPLIRHWRSAESKDVFSSNEIIPYQILNL--LSNFS  102 (626)
Q Consensus        26 DTllpgq~l~~~~~L~S~~s~~d~s~G~~~l~~~-~~~~~~~~~~~~~~yw~~~~~~~~~~~~~~~~~~~~~~--~~~~~  102 (626)
                      |||+|||.|..++.|+|         |.|+|.|+ +|+..++  .+....|.+........      .....+  ...+.
T Consensus         2 n~L~~g~~L~~g~~L~s---------g~y~l~~q~DgNLvly--~~~~~vW~ant~~~~~~------~~~L~l~~dGnLv   64 (105)
T 4h3o_A            2 NILDNNEGLYAGQSLDV---------EPYHFIMQDDCNLVLY--DHSTSTWASNTEIGGKS------GCSAVLQSDGNFV   64 (105)
T ss_dssp             CEECTTEEECTTCEEEE---------TTEEEEECTTSCEEEE--ETTEEEEECCCCCTTCC------SCEEEECTTSCEE
T ss_pred             CCcCCCCEEcCCCEEEE---------CCEEEEECCCCeEEEE--ECCEEEEEecCCCCCCc------cEEEEEeCCccEE
Confidence            79999999999999986         88999999 7776554  56778998765543211      011111  11122


Q ss_pred             eeecCCCCc-eeEEEEEecCCCceeEEEEEeecccEEEEE
Q 006915          103 HSVKPTGKN-AVHPNLIVPSIDYSRTRLIMNYTGEIQYWT  141 (626)
Q Consensus       103 ~~~~~~~~~-~~~~~~~~~~~~~~~~rl~l~~dG~l~~~~  141 (626)
                      ..+.   .+ .++.+ .... .....+++|..||+|.+|.
T Consensus        65 L~d~---~~~~vWss-~t~~-~~~~~~l~L~ddGNlVly~   99 (105)
T 4h3o_A           65 VYDS---SGRSLWAS-HSTR-GSGNYILILQDDGNVIIYG   99 (105)
T ss_dssp             EECT---TCCEEEEC-CCCC-CSSCEEEEECTTSCEEEEE
T ss_pred             EECC---CcEEEEEe-cCCC-CCCCEEEEEeCCCeEEEEC
Confidence            2222   22 22221 1111 2234689999999999983

>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*

Probab=97.91  E-value=5.6e-05  Score=63.30  Aligned_cols=96  Identities=8%  Similarity=0.051  Sum_probs=57.2

Q ss_pred             cccccCccccCcceEEEccCCCCCCCccEEEEEc-CCCceeEEecCCeeEEeeCCcCCccccccccccceeceeeeeeee
Q 006915           26 DTFLAGMYMGENLSLTSWAGHDDPKPGNFTFKMD-QGENQYQITKPLIRHWRSAESKDVFSSNEIIPYQILNLLSNFSHS  104 (626)
Q Consensus        26 DTllpgq~l~~~~~L~S~~s~~d~s~G~~~l~~~-~~~~~~~~~~~~~~yw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (626)
                      +||+|||.|..+..|+         .|.|.|.|+ +|+..+  +.....+|.++.....  .   ...........+...
T Consensus         2 ntL~~gq~L~~g~~L~---------~g~~~L~~q~dGnLvl--y~~~~~vW~snt~~~~--~---~~~l~l~~dGNLvl~   65 (109)
T 3dzw_A            2 NILYSGETLSPGEFLN---------NGRYVFIMQEDCNLVL--YDVDKPIWATNTGGLD--R---RCHLSMQSDGNLVVY   65 (109)
T ss_dssp             CEEETTEEECTTCEEE---------ETTEEEEECTTSCEEE--EETTEEEEECCCTTSS--S---SCEEEECTTSCEEEE
T ss_pred             CCcCCCCEeCCCCEEE---------CCCEEEEEcCCCcEEE--EeCCEEEEECCcccCC--C---CEEEEEeCCCCEEEE
Confidence            6999999999999994         499999999 776554  3446889987654321  0   011111111122222


Q ss_pred             ecCCCCceeEEEEEecCCCceeEEEEEeecccEEEEE
Q 006915          105 VKPTGKNAVHPNLIVPSIDYSRTRLIMNYTGEIQYWT  141 (626)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~rl~l~~dG~l~~~~  141 (626)
                      +.  .....+.+-. .. .....+++|..||+|++|.
T Consensus        66 ~~--~~~~~W~S~t-~~-~~~~~~~~L~ddGNlvly~   98 (109)
T 3dzw_A           66 SP--RNNPIWASNT-GG-ENGNYVCVLQKDRNVVIYG   98 (109)
T ss_dssp             CT--TSCEEEECCC-CC-SSSCEEEEECTTSCEEEEE
T ss_pred             CC--CCCEEEECCC-CC-CCCCEEEEEeCCCEEEEEC
Confidence            22  0122232211 11 2235789999999999996

>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A

Probab=97.61  E-value=0.00019  Score=60.39  Aligned_cols=94  Identities=14%  Similarity=0.163  Sum_probs=58.2

Q ss_pred             CcccccCccccCcceEEEccCCCCCCCccEEEEEc-CCCceeEEecCCeeEEeeCCcCCccccccccccceece--eeee
Q 006915           25 TDTFLAGMYMGENLSLTSWAGHDDPKPGNFTFKMD-QGENQYQITKPLIRHWRSAESKDVFSSNEIIPYQILNL--LSNF  101 (626)
Q Consensus        25 tDTllpgq~l~~~~~L~S~~s~~d~s~G~~~l~~~-~~~~~~~~~~~~~~yw~~~~~~~~~~~~~~~~~~~~~~--~~~~  101 (626)
                      ||||+|||.|..+..|.         .|.|.|.|+ +|...++  +....+|.+......       ......+  ...+
T Consensus         1 tdtl~~gq~L~~g~~L~---------~~~~~L~~~~dgnlvl~--~~~~~vW~sn~~~~~-------~~~~l~l~~~GNL   62 (112)
T 1xd5_A            1 SDRLNSGHQLDTGGSLA---------EGGYLFIIQNDCNLVLY--DNNRAVWASGTNGKA-------SGCVLKMQNDGNL   62 (112)
T ss_dssp             CCEEETTEEECTTCEEE---------ETTEEEEECTTSCEEEE--ETTEEEEECCCTTSC-------SSEEEEECTTSCE
T ss_pred             CCCCCCCCEECCCCEEe---------CCCEEEEEcCCCcEEEE--ECCEEEEeCCCcCCC-------CCEEEEEeCCCCE
Confidence            79999999999999994         488999999 7766543  346789998754311       0111111  1112


Q ss_pred             eeeecCCCCceeEEEEEecCCCceeEEEEEeecccEEEEE
Q 006915          102 SHSVKPTGKNAVHPNLIVPSIDYSRTRLIMNYTGEIQYWT  141 (626)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~~rl~l~~dG~l~~~~  141 (626)
                      ...+.   ....+.++....  ....+++|+.||++.+|.
T Consensus        63 vl~d~---~~~~W~S~~~~~--~g~~~l~l~~dGnlvl~~   97 (112)
T 1xd5_A           63 VIYSG---SRAIWASNTNRQ--NGNYYLILQRDRNVVIYD   97 (112)
T ss_dssp             EEEET---TEEEEECCCCCS--CCCCEEEECTTSCEEEEC
T ss_pred             EEEcC---CEEEEECCccCC--CCCEEEEEeCCCcEEEEC
Confidence            22221   233444333222  234589999999999985

>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A*

Probab=97.60  E-value=0.00023  Score=60.12  Aligned_cols=96  Identities=16%  Similarity=0.152  Sum_probs=58.0

Q ss_pred             CcccccCccccCcceEEEccCCCCCCCccEEEEEc-CCCceeEEecCCeeEEeeCCcCCccccccccccceeceeeeeee
Q 006915           25 TDTFLAGMYMGENLSLTSWAGHDDPKPGNFTFKMD-QGENQYQITKPLIRHWRSAESKDVFSSNEIIPYQILNLLSNFSH  103 (626)
Q Consensus        25 tDTllpgq~l~~~~~L~S~~s~~d~s~G~~~l~~~-~~~~~~~~~~~~~~yw~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (626)
                      .|||+|||.|..+..|+         .|.|.|.|+ +|+..++  +....+|.+......  .   ...........+..
T Consensus         2 ~dtl~~gq~L~~g~~L~---------~g~~~L~~~~dgnlvly--~~~~~vW~sn~~~~~--~---~~~l~l~~~GnLvl   65 (115)
T 2dpf_A            2 DNVLLSGQTLHADHSLQ---------AGAYTLTIQNKCNLVKY--QNGRQIWASNTDRRG--S---GCRLTLLSDGNLVI   65 (115)
T ss_dssp             CCEEETTCEEETTEEEE---------ETTEEEEECTTSCEEEE--ETTEEEEECSCTTSC--S---SCEEEECTTSCEEE
T ss_pred             CCEeCCCCEECCCCEEE---------CCCEEEEEcCCCcEEEE--eCCEEEEeCCCCCCC--C---ceEEEECCCCcEEE
Confidence            59999999999999997         489999999 7765544  457789998754321  0   00111111112222


Q ss_pred             eecCCCCceeEEEEEecCCCceeEEEEEeecccEEEE
Q 006915          104 SVKPTGKNAVHPNLIVPSIDYSRTRLIMNYTGEIQYW  140 (626)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~rl~l~~dG~l~~~  140 (626)
                      .+.  .....+.++....  ....+++|+.||++.+|
T Consensus        66 ~d~--~~~~vW~S~~~~~--~g~~~l~l~~dGnlvl~   98 (115)
T 2dpf_A           66 YDH--NNNDVWGSACWGD--NGKYALVLQKDGRFVIY   98 (115)
T ss_dssp             ECT--TCCEEEECCCCCS--SSCCEEEECTTSCEEEE
T ss_pred             ECC--CceEEEEcCCCCC--CCCEEEEEeCCCeEEEE
Confidence            222  1223333333211  23457999999999997

>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0

Probab=97.28  E-value=0.00035  Score=58.58  Aligned_cols=27  Identities=11%  Similarity=0.198  Sum_probs=20.2

Q ss_pred             CCCccEEEEEc-CCCceeEEecCCeeEEeeCC
Q 006915           49 PKPGNFTFKMD-QGENQYQITKPLIRHWRSAE   79 (626)
Q Consensus        49 ~s~G~~~l~~~-~~~~~~~~~~~~~~yw~~~~   79 (626)
                      ...|.|.+.++ +|+..+|-    .++|.++.
T Consensus        82 ~~~~~~~l~Lq~dGNlvly~----~~~W~s~t  109 (111)
T 3mez_A           82 TVRGNYAATLGPDQHVTIYG----PAIWSTPA  109 (111)
T ss_dssp             CCSSCCEEEECTTSCEEEEC----SEEEECCC
T ss_pred             CCCcCEEEEECCCCeEEEec----cCEEccCC
Confidence            35578999999 78777763    67898764

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=97.17  E-value=0.00028  Score=70.82  Aligned_cols=121  Identities=21%  Similarity=0.204  Sum_probs=75.6

Q ss_pred             ccccccCeEEEEEEEcCCCcEEEEEEecCCCcccHHHHHHHHHhccc---------cceecchHH-----HHHHhhcccc
Q 006915          411 NKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETSNS---------NATIGANVK-----AFVREMKTFS  476 (626)
Q Consensus       411 ~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~e~~~~~~---------~~~~~~~~~-----~~~~~~~~~~  476 (626)
                      +.++.|.+..||+..    ..+++|.....  .....+.+|.+....         ...+.....     .-+.+|+.+.
T Consensus        26 ~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~   99 (304)
T 3sg8_A           26 EISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIK   99 (304)
T ss_dssp             CEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCC
T ss_pred             EecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccC
Confidence            568999999999863    46888986532  233456666554211         111111000     0011233344


Q ss_pred             CCCccc----CCCHHHHHHHHHHHHHHHHHHHhC----------------------------------------------
Q 006915          477 DPTLSA----LLHWEMRFNIIIGIARGLLYLHQD----------------------------------------------  506 (626)
Q Consensus       477 ~~~l~~----~l~~~~~~~i~~~ia~gL~yLH~~----------------------------------------------  506 (626)
                      +..+..    .++..++..++.++++.|..||..                                              
T Consensus       100 G~~l~~~~~~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  179 (304)
T 3sg8_A          100 GVPLTPLLLNNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDFYRD  179 (304)
T ss_dssp             CEECCHHHHHTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHH
T ss_pred             CeECCccccccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHHHHHH
Confidence            433321    245566778888888888888862                                              


Q ss_pred             ---------CCCceEecCCCCCCeEECC--CCcEEEEecCcc
Q 006915          507 ---------SRLRIIHRDLKTSNILLDQ--EMNPKISDFGLA  537 (626)
Q Consensus       507 ---------~~~~ivHrDlkp~NILl~~--~~~~kl~DFGla  537 (626)
                               ..+.++|+|++|.|||+++  ...+.|+||+.+
T Consensus       180 ~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~  221 (304)
T 3sg8_A          180 ILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDA  221 (304)
T ss_dssp             HHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTC
T ss_pred             HHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCC
Confidence                     1245899999999999998  556899999987

>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1

Probab=97.05  E-value=0.0034  Score=53.17  Aligned_cols=97  Identities=8%  Similarity=-0.051  Sum_probs=60.2

Q ss_pred             CcccccCccccCcceEE--EccCCCCCCCccEEEEEc-CCCceeEEecCCeeEEeeCCcCCccccccccccceece--ee
Q 006915           25 TDTFLAGMYMGENLSLT--SWAGHDDPKPGNFTFKMD-QGENQYQITKPLIRHWRSAESKDVFSSNEIIPYQILNL--LS   99 (626)
Q Consensus        25 tDTllpgq~l~~~~~L~--S~~s~~d~s~G~~~l~~~-~~~~~~~~~~~~~~yw~~~~~~~~~~~~~~~~~~~~~~--~~   99 (626)
                      +|||.|||.|..+..|+  |       ..|.|.|.|+ +|...  +++.....|.+......       ......+  ..
T Consensus         8 ~~~l~~g~~L~~g~~l~~~S-------~~g~~~L~~~~dgnlv--ly~~~~~vW~sn~~~~~-------~~~~l~l~~dG   71 (119)
T 1b2p_A            8 QPDDNHPQILHATESLEILF-------GTHVYRFIMQTDCNLV--LYDNNNPIWATNTGGLG-------NGCRAVLQPDG   71 (119)
T ss_dssp             CSSSCCCCEEETTCEEEEEE-------TTEEEEEEECTTSCEE--EEETTEEEEECCCTTSC-------SSCEEEECTTS
T ss_pred             CcccCCCCEEcCCCEEEEeC-------CCCCEEEEEecCCCEE--EEECCEEEEeCCCccCC-------CceEEEEccCC
Confidence            78999999999999999  6       5799999999 66644  34446789987654221       0111111  11


Q ss_pred             eeeeeecCCCCceeEEEEEecCCCceeEEEEEeecccEEEEE
Q 006915          100 NFSHSVKPTGKNAVHPNLIVPSIDYSRTRLIMNYTGEIQYWT  141 (626)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~rl~l~~dG~l~~~~  141 (626)
                      .+...+.  .....+.++....  ....++.|+.||++.+|.
T Consensus        72 NLVl~d~--~~~~lW~S~~~~~--~g~~~l~l~~~Gnlvl~~  109 (119)
T 1b2p_A           72 VLVVITN--ENVTVWQSPVAGK--AGHYVLVLQPDRNVVIYG  109 (119)
T ss_dssp             CEEEECT--TCCEEEECSCCCC--SSCEEEEECTTSCEEEEE
T ss_pred             EEEEEeC--CCcEEEcCCCCCC--CCCEEEEEECCCcEEEEC
Confidence            2222222  1233444443222  234579999999998875

>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*

Probab=96.74  E-value=0.0062  Score=50.73  Aligned_cols=96  Identities=9%  Similarity=0.004  Sum_probs=58.6

Q ss_pred             CcccccCccccCcceEEEccCCCCCCCccEEEEEc-CCCceeEEecCCeeEEeeCCcCCccccccccccceece--eeee
Q 006915           25 TDTFLAGMYMGENLSLTSWAGHDDPKPGNFTFKMD-QGENQYQITKPLIRHWRSAESKDVFSSNEIIPYQILNL--LSNF  101 (626)
Q Consensus        25 tDTllpgq~l~~~~~L~S~~s~~d~s~G~~~l~~~-~~~~~~~~~~~~~~yw~~~~~~~~~~~~~~~~~~~~~~--~~~~  101 (626)
                      ||||.+||.|..+..|+ -       .|.|.|.|+ +|+..++  +.....|.+......       ......+  ...+
T Consensus         1 ~d~l~~g~~L~~g~~l~-~-------~~~~~l~~~~dGnlvl~--~~~~~vW~sn~~~~~-------~~~~l~l~~dGNL   63 (110)
T 3a0c_A            1 VNSLSSPNSLFTGHSLE-V-------GPSYRLIMQGDCNFVLY--DSGKPVWASNTGGLG-------SGCRLTLHNNGNL   63 (110)
T ss_dssp             CCEEETTCEECTTCEEE-E-------TTTEEEEECTTSCEEEE--ETTEEEEECCCTTSC-------SSCEEEECTTSCE
T ss_pred             CCEeCCCCEECCCCEEE-E-------CCCEEEEEcCCCcEEEE--ECCEEEEECCCCCCC-------CcEEEEEeCCCCE
Confidence            79999999999999997 1       478999999 7766544  356789987654321       0111111  1122


Q ss_pred             eeeecCCCCceeEEEEEecCCCceeEEEEEeecccEEEEE
Q 006915          102 SHSVKPTGKNAVHPNLIVPSIDYSRTRLIMNYTGEIQYWT  141 (626)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~~rl~l~~dG~l~~~~  141 (626)
                      ...+.  .....+.++....  ....++.|+.||++.+|.
T Consensus        64 Vl~~~--~~~~~W~S~t~~~--~g~~~l~l~~dGnlvl~~   99 (110)
T 3a0c_A           64 VIYDQ--SNRVIWQTKTNGK--EDHYVLVLQQDRNVVIYG   99 (110)
T ss_dssp             EEECT--TCCEEEECCCCCS--SSCCEEEECTTSCEEEEC
T ss_pred             EEECC--CCcEEEecCCCCC--CCCEEEEEeCCccEEEEC
Confidence            22222  1233444443322  224579999999998863

>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*

Probab=96.67  E-value=0.0022  Score=53.39  Aligned_cols=71  Identities=17%  Similarity=0.270  Sum_probs=40.7

Q ss_pred             CcccEEEEeCCCCceEEeeCCCCCc-----ccccCccccC--cceEEEccCCCCCCCccEEEEEc-CCCceeEEecCCee
Q 006915            2 DSGNFVLQDDQVRKNLWESFKYPTD-----TFLAGMYMGE--NLSLTSWAGHDDPKPGNFTFKMD-QGENQYQITKPLIR   73 (626)
Q Consensus         2 dsGNlvl~~~~~~~~lWqSFd~PtD-----Tllpgq~l~~--~~~L~S~~s~~d~s~G~~~l~~~-~~~~~~~~~~~~~~   73 (626)
                      ++|||||++.  +.++|.|=-...+     +|...-.|..  ...-+-|.+.+....+.|.+.++ +|+..++-    .+
T Consensus        27 ~dGnLvly~~--~~~vW~snt~~~~~~~~l~l~~dGNLvl~~~~~~~~W~S~t~~~~~~~~~~L~ddGNlvly~----~~  100 (109)
T 3dzw_A           27 EDCNLVLYDV--DKPIWATNTGGLDRRCHLSMQSDGNLVVYSPRNNPIWASNTGGENGNYVCVLQKDRNVVIYG----TA  100 (109)
T ss_dssp             TTSCEEEEET--TEEEEECCCTTSSSSCEEEECTTSCEEEECTTSCEEEECCCCCSSSCEEEEECTTSCEEEEE----SC
T ss_pred             CCCcEEEEeC--CEEEEECCcccCCCCEEEEEeCCCCEEEECCCCCEEEECCCCCCCCCEEEEEeCCCEEEEEC----CC
Confidence            6799999886  4789987543211     1112212211  01123466665555577899999 77776653    15


Q ss_pred             EEeeC
Q 006915           74 HWRSA   78 (626)
Q Consensus        74 yw~~~   78 (626)
                      .|.++
T Consensus       101 ~W~s~  105 (109)
T 3dzw_A          101 RWATG  105 (109)
T ss_dssp             CCCCC
T ss_pred             EEeCC
Confidence            67665

>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}

Probab=96.61  E-value=0.003  Score=52.69  Aligned_cols=33  Identities=12%  Similarity=0.324  Sum_probs=21.7

Q ss_pred             EccCCCCCCCccEEEEEc-CCCceeEEecCCeeEEeeC
Q 006915           42 SWAGHDDPKPGNFTFKMD-QGENQYQITKPLIRHWRSA   78 (626)
Q Consensus        42 S~~s~~d~s~G~~~l~~~-~~~~~~~~~~~~~~yw~~~   78 (626)
                      -|.|...-..|.|.+.++ +|+..++-    .+.|.++
T Consensus        76 iW~S~t~~~~~~~~~~L~~dGNlvly~----~~~W~t~  109 (110)
T 3r0e_B           76 IWSSRSSSKQGEYVLILQDDGFGVIYG----PAIFETS  109 (110)
T ss_dssp             EEECCCCCSSSCCEEEECTTSCEEEEC----SEEEESC
T ss_pred             EEEcCCcCCCCCEEEEEcCCccEEEec----CCEecCC
Confidence            355544334567899998 77777653    3778775

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=96.57  E-value=0.0017  Score=66.53  Aligned_cols=30  Identities=13%  Similarity=0.240  Sum_probs=25.7

Q ss_pred             CCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          508 RLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       508 ~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      .+.++|+|+.+.|||++++..+.|+||+.+
T Consensus       221 ~~~l~HgDl~~~Nil~~~~~~~~vIDwe~a  250 (357)
T 3ats_A          221 EPVLLWGDARVGNVLYRDFQPVAVLDWEMV  250 (357)
T ss_dssp             CCEEECSSCSGGGEEEETTEEEEECCGGGC
T ss_pred             CceEEeCCCCCCeEEEeCCcEEEEEccccc
Confidence            356999999999999996555799999987

>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}

Probab=96.55  E-value=0.0032  Score=52.45  Aligned_cols=35  Identities=11%  Similarity=0.142  Sum_probs=23.4

Q ss_pred             ccCCCCCCCccEEEEEc-CCCceeEEecCCeeEEeeCCcC
Q 006915           43 WAGHDDPKPGNFTFKMD-QGENQYQITKPLIRHWRSAESK   81 (626)
Q Consensus        43 ~~s~~d~s~G~~~l~~~-~~~~~~~~~~~~~~yw~~~~~~   81 (626)
                      |.+......+.|.+.++ +|+..++-    .+.|++++|-
T Consensus        72 Wss~t~~~~~~~~~~L~~dGNlvly~----~~~W~s~t~~  107 (109)
T 3r0e_A           72 WKSGAQSVKGNYAAVVHPDGRLVVFG----PSVFKIDPWV  107 (109)
T ss_dssp             EECCCCCSSSCCEEEEETTTEEEEEC----SEEEEECTTS
T ss_pred             EcCCCcCCCcCEEEEEcCCCeEEEEe----cCEECCCCcc
Confidence            44444334567889998 77776653    5789988774

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=96.49  E-value=0.0025  Score=63.96  Aligned_cols=29  Identities=38%  Similarity=0.543  Sum_probs=24.4

Q ss_pred             CceEecCCCCCCeEECC---CCc-EEEEecCcc
Q 006915          509 LRIIHRDLKTSNILLDQ---EMN-PKISDFGLA  537 (626)
Q Consensus       509 ~~ivHrDlkp~NILl~~---~~~-~kl~DFGla  537 (626)
                      +.++|+|++|.|||++.   ++. +.|+||+.+
T Consensus       190 ~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a  222 (306)
T 3tdw_A          190 PRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDA  222 (306)
T ss_dssp             CEEECSCCSGGGEEECTTCSSCCEEEECCCTTC
T ss_pred             CeeEeCCCCcccEEEecCCCCCceEEEEehhhc
Confidence            35799999999999987   455 589999977

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=96.33  E-value=0.0021  Score=66.99  Aligned_cols=28  Identities=32%  Similarity=0.469  Sum_probs=24.5

Q ss_pred             CceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          509 LRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       509 ~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ..++|+|+.|.|||++.+ .++|+||..+
T Consensus       227 ~~L~HGDl~~~Nil~~~~-~~~lID~e~a  254 (397)
T 2olc_A          227 ETLIHGDLHTGSIFASEH-ETKVIDPEFA  254 (397)
T ss_dssp             CEEECSCCSGGGEEECSS-CEEECCCTTC
T ss_pred             CceeeCCCCcCcEEEeCC-CeEEEeCccc
Confidence            469999999999999876 4899999876

>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1

Probab=96.06  E-value=0.0031  Score=60.61  Aligned_cols=29  Identities=17%  Similarity=0.272  Sum_probs=20.1

Q ss_pred             CCCccEEEEEc-CCCceeEEecCCeeEEeeCCcC
Q 006915           49 PKPGNFTFKMD-QGENQYQITKPLIRHWRSAESK   81 (626)
Q Consensus        49 ~s~G~~~l~~~-~~~~~~~~~~~~~~yw~~~~~~   81 (626)
                      .+.|.|.+.|+ +|+..++  .  ..+|.+..+.
T Consensus        85 ~~~~~~~~~l~d~Gnlvl~--~--~~~W~S~~~p  114 (236)
T 1dlp_A           85 GSIGNYVLVLQPDRTVTIY--G--PGLWDSGTSN  114 (236)
T ss_dssp             CCSSCCEEEECSSSCEEEE--C--SEEEECSCCC
T ss_pred             ccCCcEEEEEeCCCCEEEe--c--CCEEECCCCC
Confidence            34567889998 7777664  2  2799887554

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=95.68  E-value=0.011  Score=58.59  Aligned_cols=48  Identities=17%  Similarity=0.203  Sum_probs=35.7

Q ss_pred             CccccccccccCeEEEEEEEcCCCcEEEEEEecCCCcccHHHHHHHHH
Q 006915          406 NFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIE  453 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~e~~  453 (626)
                      .....+.+|.|..+.||+.++.+|+.|.||+-..........|..|..
T Consensus        16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~   63 (288)
T 3f7w_A           16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEAL   63 (288)
T ss_dssp             CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHH
T ss_pred             CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHH
Confidence            345567899999999999999999999999876543333344555544

>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0

Probab=95.66  E-value=0.031  Score=46.64  Aligned_cols=75  Identities=16%  Similarity=0.197  Sum_probs=43.3

Q ss_pred             CCcccEEEEeCCCCceEEeeCCCCCc-----ccccCccccC--cceEEEccCCCCCCCccEEEEEc-CCCceeEEecCCe
Q 006915            1 MDSGNFVLQDDQVRKNLWESFKYPTD-----TFLAGMYMGE--NLSLTSWAGHDDPKPGNFTFKMD-QGENQYQITKPLI   72 (626)
Q Consensus         1 ldsGNlvl~~~~~~~~lWqSFd~PtD-----Tllpgq~l~~--~~~L~S~~s~~d~s~G~~~l~~~-~~~~~~~~~~~~~   72 (626)
                      +++|||||++...+.++|.|=-+-.+     +|...-.|..  ...-+-|.|.+.-..|.|.+.++ +|...++-    .
T Consensus        31 q~dGNLvL~~~~~~~~vWssnt~~~~~~~~l~l~~dGNLVl~d~~~~~iW~S~t~~~~~~~~~~L~~dGnlvly~----~  106 (113)
T 3mez_B           31 RDDCNLVLTKGSKTNIVWESGTSGRGQHCFMRLGHSGELDITDDRLNTVFVSNTVGQEGDYVLILQINGQAVVYG----P  106 (113)
T ss_dssp             CTTSCEEEEETTTTEEEEECCCTTSCSSCEEEECTTSCEEEECTTSCEEEECSCCCSSSCCEEEECTTSCEEEEC----S
T ss_pred             cCCCEEEEEECCCCEEEEECCcccCCcCEEEEEeCCCcEEEECCCCCEEEECCCcCCCCCEEEEEcCCceEEEec----C
Confidence            36899999986336899998543211     1111112211  00112366665445577889998 77776652    5


Q ss_pred             eEEeeCC
Q 006915           73 RHWRSAE   79 (626)
Q Consensus        73 ~yw~~~~   79 (626)
                      +.|.+++
T Consensus       107 ~~W~s~~  113 (113)
T 3mez_B          107 AVWSTAA  113 (113)
T ss_dssp             EEEESCC
T ss_pred             CEecCCC
Confidence            7788764

>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*

Probab=95.62  E-value=0.021  Score=47.02  Aligned_cols=20  Identities=35%  Similarity=0.529  Sum_probs=16.4

Q ss_pred             CCcccEEEEeCCCCceEEeeCC
Q 006915            1 MDSGNFVLQDDQVRKNLWESFK   22 (626)
Q Consensus         1 ldsGNlvl~~~~~~~~lWqSFd   22 (626)
                      +++|||||++.  +.++|+|--
T Consensus        26 q~DgNLvly~~--~~~vW~ant   45 (105)
T 4h3o_A           26 QDDCNLVLYDH--STSTWASNT   45 (105)
T ss_dssp             CTTSCEEEEET--TEEEEECCC
T ss_pred             CCCCeEEEEEC--CEEEEEecC
Confidence            47899999985  478999864

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=94.92  E-value=0.021  Score=57.25  Aligned_cols=42  Identities=26%  Similarity=0.326  Sum_probs=31.2

Q ss_pred             HHHHHHHHHhC----CCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          496 IARGLLYLHQD----SRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       496 ia~gL~yLH~~----~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +...+++++..    .+..++|+|+.+.|||++++..+.|+||+.+
T Consensus       170 l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a  215 (322)
T 2ppq_A          170 IRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFA  215 (322)
T ss_dssp             HHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTC
T ss_pred             HHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhc
Confidence            44455555532    2346899999999999998766689999887

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=93.64  E-value=0.038  Score=55.76  Aligned_cols=42  Identities=24%  Similarity=0.152  Sum_probs=33.1

Q ss_pred             HHHHHHHHHh----------CCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          496 IARGLLYLHQ----------DSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       496 ia~gL~yLH~----------~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +..++.+|+.          ..+..++|+|+++.|||++.++.+.|+||+.+
T Consensus       199 ~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a  250 (346)
T 2q83_A          199 GLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTV  250 (346)
T ss_dssp             HHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTC
T ss_pred             HHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhc
Confidence            4456666653          12356999999999999988889999999987

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=92.35  E-value=0.11  Score=51.43  Aligned_cols=28  Identities=29%  Similarity=0.264  Sum_probs=24.1

Q ss_pred             CceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          509 LRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       509 ~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ..++|+|+.+.||| ..++.+.|+||..+
T Consensus       173 ~~l~HgDl~~~Nil-~~~~~~~lID~e~a  200 (301)
T 3dxq_A          173 LAACHCDPLCENFL-DTGERMWIVDWEYS  200 (301)
T ss_dssp             CEEECSCCCGGGEE-ECSSCEEECCCTTC
T ss_pred             ceeeccCCCcCCEE-ECCCCEEEEecccc
Confidence            35899999999999 55667899999877

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=91.08  E-value=0.28  Score=48.93  Aligned_cols=28  Identities=14%  Similarity=0.170  Sum_probs=24.5

Q ss_pred             CCCceEecCCCCCCeEECCCCcEEEEecC
Q 006915          507 SRLRIIHRDLKTSNILLDQEMNPKISDFG  535 (626)
Q Consensus       507 ~~~~ivHrDlkp~NILl~~~~~~kl~DFG  535 (626)
                      ..+.++|+|+.+.|+|++.++ +-|.||.
T Consensus       205 ~~~~l~HgD~~~~N~l~~~~~-~~~iD~~  232 (312)
T 3jr1_A          205 PKPSILHGNLWIENCIQVDDK-IFVCNPA  232 (312)
T ss_dssp             CCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred             CCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence            356799999999999999887 8899984

>2ll3_A Micronemal protein 4; cell adhesion; NMR {Toxoplasma gondii} PDB: 2ll4_M*

Probab=90.89  E-value=0.22  Score=38.34  Aligned_cols=35  Identities=26%  Similarity=0.580  Sum_probs=30.0

Q ss_pred             CCCChHHHHHHhccCCCEEEEeeccccccCCCCCeEEecc
Q 006915          231 PVASEAECSKKCRGFCPCTAYSYKESKRRDEAGTCCIWIE  270 (626)
Q Consensus       231 ~~~s~~~C~~~Cl~~CsC~a~~y~~~~~~~~~~~C~~~~~  270 (626)
                      ..+++++|+.+|+.+=.|.+|.|+     .....|+++.+
T Consensus        28 ~~~sl~~Cq~aC~a~~~C~aFTyN-----~~s~~CflKs~   62 (82)
T 2ll3_A           28 RASSLSECRARCQAEKECSHYTYN-----VKSGLCYPKRG   62 (82)
T ss_dssp             ECSSHHHHHHHHHHCTTEEEEEEE-----TTTTEEEEEES
T ss_pred             cCCCHHHHHHHhhccCCCCeEEec-----cCCCceEcccC
Confidence            577999999999999999999997     34467999865

>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A*

Probab=90.27  E-value=0.84  Score=44.46  Aligned_cols=49  Identities=18%  Similarity=0.197  Sum_probs=36.8

Q ss_pred             CCCcccccCccccCcceEEEccCCCCCCCccEEEEEc-CCCceeEEecCCeeEEeeCCc
Q 006915           23 YPTDTFLAGMYMGENLSLTSWAGHDDPKPGNFTFKMD-QGENQYQITKPLIRHWRSAES   80 (626)
Q Consensus        23 ~PtDTllpgq~l~~~~~L~S~~s~~d~s~G~~~l~~~-~~~~~~~~~~~~~~yw~~~~~   80 (626)
                      ..+|||.+||.|..+..|+|       ..|.|.|.+. ++  .+|++++....|.....
T Consensus        12 ~~~~~l~~g~~l~~~~~l~S-------~~g~F~lgf~~~~--~~~ly~~~~vvW~Anr~   61 (276)
T 3m7h_A           12 VGTSVLPAYQTLSAGQYLLS-------PNQRFKLLLQGDG--NLVIQDNGATVWVANEQ   61 (276)
T ss_dssp             TTSSEECTTEEBCTTCEEEC-------TTSSEEEEECTTS--CEEEEETTEEEEECSTT
T ss_pred             ccCCEecCCCEecCCCEEEc-------CCCcEEEEEECCC--CeEEECCCCeEEECCCC
Confidence            45899999999999999998       6799999999 44  33344444467765544

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=90.18  E-value=0.16  Score=53.11  Aligned_cols=29  Identities=24%  Similarity=0.460  Sum_probs=25.9

Q ss_pred             CCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          508 RLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       508 ~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      .+.++|+|++|.|||++.++ ++|+||+.+
T Consensus       231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a  259 (420)
T 2pyw_A          231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFS  259 (420)
T ss_dssp             CCEEECSCCSGGGEEECSSC-EEECCCTTC
T ss_pred             CCeEEecCCCCCcEEEeCCC-CEEEeCccc
Confidence            45699999999999998876 999999887

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=87.80  E-value=0.49  Score=47.39  Aligned_cols=30  Identities=30%  Similarity=0.443  Sum_probs=26.4

Q ss_pred             CCceEecCCCCCCeEECCC----CcEEEEecCcc
Q 006915          508 RLRIIHRDLKTSNILLDQE----MNPKISDFGLA  537 (626)
Q Consensus       508 ~~~ivHrDlkp~NILl~~~----~~~kl~DFGla  537 (626)
                      ...++|+|+.+.|||++.+    ..+.|+||+.+
T Consensus       182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a  215 (333)
T 3csv_A          182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDA  215 (333)
T ss_dssp             CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTC
T ss_pred             CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCc
Confidence            4569999999999999875    67999999987

>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}

Probab=87.79  E-value=0.08  Score=35.39  Aligned_cols=21  Identities=24%  Similarity=0.055  Sum_probs=7.5

Q ss_pred             eehHHHHHHHHHHHHhheeee
Q 006915          326 GMTIASGIILSCIIIYFYTRR  346 (626)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~~~r  346 (626)
                      +++.++++++++++++++++|
T Consensus        16 gVVgGv~~~~ii~~~~~~~~R   36 (44)
T 2ks1_B           16 GMVGALLLLLVVALGIGLFMR   36 (44)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH
T ss_pred             ehhHHHHHHHHHHHHHHHHhh
Confidence            333333333333333333333

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=87.14  E-value=0.2  Score=48.44  Aligned_cols=29  Identities=21%  Similarity=0.286  Sum_probs=25.7

Q ss_pred             CceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          509 LRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       509 ~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +.++|+|+.+.|||+++++.+-|+||+.+
T Consensus       193 ~~l~HGDl~~~Nil~~~~~~~~viDwe~a  221 (272)
T 4gkh_A          193 SVVTHGDFSLDNLIFDEGKLIGCIDVGRV  221 (272)
T ss_dssp             EEEECSCCCTTSEEEETTEEEEECCCTTC
T ss_pred             cEEEcCCCCCCeEEEECCeEEEEEECccc
Confidence            34899999999999998877789999987

>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}

Probab=85.09  E-value=0.098  Score=34.87  Aligned_cols=6  Identities=67%  Similarity=1.137  Sum_probs=2.3

Q ss_pred             heeeee
Q 006915          342 FYTRRK  347 (626)
Q Consensus       342 ~~~~r~  347 (626)
                      ++++||
T Consensus        32 ~~~RRR   37 (44)
T 2l2t_A           32 VYVRRK   37 (44)
T ss_dssp             HHHHTT
T ss_pred             HHhhhh
Confidence            333333

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=84.14  E-value=0.77  Score=45.71  Aligned_cols=28  Identities=29%  Similarity=0.417  Sum_probs=24.4

Q ss_pred             CCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          508 RLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       508 ~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +..++|+|+++.|||++ + .+.|+||+.+
T Consensus       194 ~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a  221 (328)
T 1zyl_A          194 TVLRLHGDCHAGNILWR-D-GPMFVDLDDA  221 (328)
T ss_dssp             CCEECCSSCSGGGEEES-S-SEEECCCTTC
T ss_pred             CeeeeeCCCCcccEeEc-C-CCEEEECCCC
Confidence            34589999999999999 4 8999999876

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=81.09  E-value=0.97  Score=45.99  Aligned_cols=28  Identities=25%  Similarity=0.477  Sum_probs=23.9

Q ss_pred             CceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          509 LRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       509 ~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ..++|+|+.+.|||++++. +.|+||..+
T Consensus       212 ~~l~HgDl~~~Nil~~~~~-~~lID~e~a  239 (369)
T 3c5i_A          212 IVFCHNDLQENNIINTNKC-LRLIDFEYS  239 (369)
T ss_dssp             EEEECSCCCGGGEEECC-C-EEECCCTTC
T ss_pred             eEEEeCCCCcccEEecCCc-EEEEEecCC
Confidence            4589999999999998655 899999877

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	626
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	4e-26
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	4e-26
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	0.001
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	2e-25
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	8e-05
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	1e-24
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	1e-24
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	4e-04
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	1e-23
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	4e-05
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	2e-23
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	3e-23
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	5e-05
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	5e-23
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	3e-04
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	6e-23
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	7e-23
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	9e-23
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	6e-04
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	9e-23
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	1e-22
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	3e-05
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	2e-22
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	1e-21
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	1e-21
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	3e-21
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	1e-20
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	5e-05
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	2e-20
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	7e-04
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	2e-20
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	2e-20
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	4e-05
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	3e-20
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	4e-06
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	4e-20
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	7e-04
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	5e-20
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	9e-20
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	2e-19
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	6e-19
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	5e-04
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	7e-19
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	0.001
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	1e-18
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	1e-18
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	2e-18
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	5e-18
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	7e-18
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	1e-17
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	1e-17
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	3e-17
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	5e-17
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	8e-17
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	9e-17
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	1e-16
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	1e-16
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	2e-16
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	2e-16
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	2e-16
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	7e-16
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	8e-16
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	9e-16
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	2e-15
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	2e-15
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	7e-15
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	4e-14
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	4e-13
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	5e-13
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	7e-13
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	8e-13
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	3e-12
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	3e-12
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	4e-11
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	4e-11
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	6e-11
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	8e-11
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	1e-10

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  107 bits (268), Expect = 4e-26
 Identities = 38/160 (23%), Positives = 72/160 (45%), Gaps = 18/160 (11%)

Query: 403 ATDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQGL-EEFKNEIET--SNSN 458
             D+F + ++LG G  G V+K    P G  +A K +       +  +   E++     ++
Sbjct: 4   KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNS 63

Query: 459 ATIGANVKAFVRE------MKTFSDPTLSALLH------WEMRFNIIIGIARGLLYLHQD 506
             I     AF  +      M+     +L  +L        ++   + I + +GL YL   
Sbjct: 64  PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR-- 121

Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLH 546
            + +I+HRD+K SNIL++     K+ DFG++  ++D   +
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN 161

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  105 bits (264), Expect = 4e-26
 Identities = 44/147 (29%), Positives = 69/147 (46%), Gaps = 17/147 (11%)

Query: 405 DNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIET------SNSN 458
              +   ++G G FG VYK K+ G   + +  +++ + Q L+ FKNE+         N  
Sbjct: 8   GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67

Query: 459 ATIGANVKAFVR-EMKTFSDPTLSALLH-------WEMRFNIIIGIARGLLYLHQDSRLR 510
             +G +    +    +     +L   LH            +I    A+G+ YLH  S   
Sbjct: 68  LFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS--- 124

Query: 511 IIHRDLKTSNILLDQEMNPKISDFGLA 537
           IIHRDLK++NI L +++  KI DFGLA
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLA 151

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.4 bits (89), Expect = 0.001
 Identities = 7/38 (18%), Positives = 17/38 (44%), Gaps = 2/38 (5%)

Query: 556 KCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPK 593
               +   C+++  ++RP    ++  +   A +L  PK
Sbjct: 241 AMKRLMAECLKKKRDERPLFPQILASIELLARSL--PK 276

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  104 bits (260), Expect = 2e-25
 Identities = 45/208 (21%), Positives = 78/208 (37%), Gaps = 24/208 (11%)

Query: 405 DNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIET----SNSN-- 458
           ++     KLG+G FG V+   + G  ++A+K L   +    E F  E +      +    
Sbjct: 17  ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLV 75

Query: 459 ---ATIGANVKAFVRE------MKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRL 509
              A +       V E      +  F        L      ++   IA G+ Y+ +   +
Sbjct: 76  QLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---M 132

Query: 510 RIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSKPNEILKCINVGLLCVQEDP 569
             +HRDL+ +NIL+ + +  K++DFGLA  + D +  A            +     +   
Sbjct: 133 NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA-----KFPIKWTAPEAAL 187

Query: 570 NDRPTMSDVVIMLGSEAMNLATPKRPAF 597
             R T+   V   G     L T  R  +
Sbjct: 188 YGRFTIKSDVWSFGILLTELTTKGRVPY 215

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.4 bits (99), Expect = 8e-05
 Identities = 10/59 (16%), Positives = 22/59 (37%)

Query: 538 LDMMDQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPA 596
           LD +++       P       ++   C +++P +RPT   +   L     +     +P 
Sbjct: 224 LDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPG 282

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  102 bits (255), Expect = 1e-24
 Identities = 44/172 (25%), Positives = 71/172 (41%), Gaps = 22/172 (12%)

Query: 397 FESI---LAATDNFSEANKLGKGGFGPVYKAKFPG-GQQIAVKRLSSASGQGLEEFKNEI 452
           +E +   L   D +    +LG G FG VYKA+        A K + + S + LE++  EI
Sbjct: 1   YEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEI 60

Query: 453 ET--SNSNATIGANVKAFVRE------MKTFSDPTLSALLH-------WEMRFNIIIGIA 497
           +   S  +  I   + AF  E      ++  +   + A++              +     
Sbjct: 61  DILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTL 120

Query: 498 RGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASS 549
             L YLH     +IIHRDLK  NIL   + + K++DFG++           S
Sbjct: 121 DALNYLHD---NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDS 169

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  101 bits (253), Expect = 1e-24
 Identities = 42/208 (20%), Positives = 72/208 (34%), Gaps = 24/208 (11%)

Query: 405 DNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIET------SNSN 458
           +      +LG G FG V+   + G  ++AVK L   S    + F  E             
Sbjct: 13  ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLV 71

Query: 459 ATIGANVKA---FVRE------MKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRL 509
                  +     + E      +  F        L      ++   IA G+ ++ + +  
Sbjct: 72  RLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-- 129

Query: 510 RIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSKPNEILKCINVGLLCVQEDP 569
             IHRDL+ +NIL+   ++ KI+DFGLA  + D +  A            +     +   
Sbjct: 130 -YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGA-----KFPIKWTAPEAIN 183

Query: 570 NDRPTMSDVVIMLGSEAMNLATPKRPAF 597
               T+   V   G     + T  R  +
Sbjct: 184 YGTFTIKSDVWSFGILLTEIVTHGRIPY 211

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.4 bits (94), Expect = 4e-04
 Identities = 9/27 (33%), Positives = 14/27 (51%)

Query: 556 KCINVGLLCVQEDPNDRPTMSDVVIML 582
           +   +  LC +E P DRPT   +  +L
Sbjct: 238 ELYQLMRLCWKERPEDRPTFDYLRSVL 264

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 99.4 bits (247), Expect = 1e-23
 Identities = 39/194 (20%), Positives = 66/194 (34%), Gaps = 45/194 (23%)

Query: 394 FID---FESILAATDNFSEA---------NKLGKGGFGPVYKAKFPGGQQ----IAVKRL 437
           FID   FE    A   F++            +G G FG V         +    +A+K L
Sbjct: 3   FIDPFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTL 62

Query: 438 -SSASGQGLEEFKNEIETSNSNATIGANVKAFVREMKTFSDPTLSALLH----------- 485
            S  + +   +F +E            +    +      +  T   ++            
Sbjct: 63  KSGYTEKQRRDFLSEASIMGQ-----FDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSF 117

Query: 486 ---------WEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGL 536
                          ++ GIA G+ YL     +  +HRDL   NIL++  +  K+SDFGL
Sbjct: 118 LRQNDGQFTVIQLVGMLRGIAAGMKYLAD---MNYVHRDLAARNILVNSNLVCKVSDFGL 174

Query: 537 ALDMMDQKLHASSK 550
           +  + D     +  
Sbjct: 175 SRFLEDDTSDPTYT 188

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.6 bits (102), Expect = 4e-05
 Identities = 10/45 (22%), Positives = 18/45 (40%)

Query: 538 LDMMDQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIML 582
           ++ ++Q        +       + L C Q+D N RP    +V  L
Sbjct: 243 INAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTL 287

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.8 bits (243), Expect = 2e-23
 Identities = 32/170 (18%), Positives = 63/170 (37%), Gaps = 25/170 (14%)

Query: 405 DNFSEANKLGKGGFGPVYKAKFPG-GQQIAVKRL--SSASGQGLEEFKNEIETSN--SNA 459
           +++     +G G +G   K +    G+ +  K L   S +    +   +E+       + 
Sbjct: 4   EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 63

Query: 460 TIGANVKAFVRE--------MKTFSDPTLSALLH----------WEMRFNIIIGIARGLL 501
            I       +          M+      L++++            E    ++  +   L 
Sbjct: 64  NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 123

Query: 502 YLHQ--DSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASS 549
             H+  D    ++HRDLK +N+ LD + N K+ DFGLA  +      A +
Sbjct: 124 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKA 173

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 98.4 bits (244), Expect = 3e-23
 Identities = 49/238 (20%), Positives = 84/238 (35%), Gaps = 52/238 (21%)

Query: 405 DNFSEANKLGKGGFGPVYKAKFPG------GQQIAVKRLS-SASGQGLEEFKNEIET--- 454
           +N      +G+G FG V++A+ PG         +AVK L   AS     +F+ E      
Sbjct: 13  NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 72

Query: 455 -SNSNATI-------------------GANVKAFVREMKTFSDPTLSAL----------- 483
             N N                        ++  F+R M   +  +LS             
Sbjct: 73  FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 132

Query: 484 ----LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALD 539
               L    +  I   +A G+ YL +    + +HRDL T N L+ + M  KI+DFGL+ +
Sbjct: 133 GPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRN 189

Query: 540 MMDQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAF 597
           +     + +         I +  +  +    +R T    V   G     + +     +
Sbjct: 190 IYSADYYKADGN----DAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPY 243

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 43.3 bits (101), Expect = 5e-05
 Identities = 10/32 (31%), Positives = 16/32 (50%)

Query: 551 PNEILKCINVGLLCVQEDPNDRPTMSDVVIML 582
            N  L+  N+  LC  + P DRP+   +  +L
Sbjct: 265 ENCPLELYNLMRLCWSKLPADRPSFCSIHRIL 296

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.6 bits (242), Expect = 5e-23
 Identities = 43/165 (26%), Positives = 68/165 (41%), Gaps = 24/165 (14%)

Query: 412 KLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETS------NSNATIGANV 465
            +GKG FG V++ K+ G +++AVK  SS   +     + EI  +      N    I A+ 
Sbjct: 10  SIGKGRFGEVWRGKWRG-EEVAVKIFSSREERS-WFREAEIYQTVMLRHENILGFIAADN 67

Query: 466 KAFVREMKTF------SDPTLSALLH-----WEMRFNIIIGIARGLLYLHQD-----SRL 509
           K      + +         +L   L+      E    + +  A GL +LH +      + 
Sbjct: 68  KDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP 127

Query: 510 RIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSKPNEI 554
            I HRDLK+ NIL+ +     I+D GLA+            PN  
Sbjct: 128 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHR 172

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.6 bits (94), Expect = 3e-04
 Identities = 6/49 (12%), Positives = 15/49 (30%), Gaps = 1/49 (2%)

Query: 535 GLALDMMDQKLHASSKPNEILKCI-NVGLLCVQEDPNDRPTMSDVVIML 582
            +    +   +    +  E L+ +  +   C   +   R T   +   L
Sbjct: 244 VVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTL 292

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 97.4 bits (242), Expect = 6e-23
 Identities = 43/187 (22%), Positives = 71/187 (37%), Gaps = 24/187 (12%)

Query: 404 TDNFSEANKLGKGGFGPVYKAK-FPGGQQIAVKRLSSASGQG---LEEFKNEIETSNS-- 457
              FS+  ++G G FG VY A+     + +A+K++S +  Q     ++   E+       
Sbjct: 14  EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 73

Query: 458 --------NATIGANVKAFVREMKTFSDPTLSAL----LHWEMRFNIIIGIARGLLYLHQ 505
                      +  +    V E    S   L  +    L       +  G  +GL YLH 
Sbjct: 74  HPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHS 133

Query: 506 DSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASS---KPNEILKCINVGL 562
                +IHRD+K  NILL +    K+ DFG A  M        +      E++  ++ G 
Sbjct: 134 ---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVGTPYWMAPEVILAMDEGQ 190

Query: 563 LCVQEDP 569
              + D 
Sbjct: 191 YDGKVDV 197

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 96.2 bits (239), Expect = 7e-23
 Identities = 41/165 (24%), Positives = 62/165 (37%), Gaps = 31/165 (18%)

Query: 405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSA---SGQGLEEFKNEIETSNSNAT 460
           ++F     LGKG FG VY A+       +A+K L  A         + + E+E  +    
Sbjct: 6   EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 65

Query: 461 IGANVKAFVREMKTFSDP-------------TLSALLH------WEMRFNIIIGIARGLL 501
              N+   +R    F D              T+   L        +     I  +A  L 
Sbjct: 66  P--NI---LRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 120

Query: 502 YLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLH 546
           Y H     R+IHRD+K  N+LL      KI+DFG ++     +  
Sbjct: 121 YCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 162

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 95.9 bits (238), Expect = 9e-23
 Identities = 31/160 (19%), Positives = 58/160 (36%), Gaps = 19/160 (11%)

Query: 405 DNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETSNS------- 457
            + +   +LG G FG V   K+ G   +A+K +   S    +EF  E +   +       
Sbjct: 4   KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLV 62

Query: 458 ---NATIGANVKAFVREMKTFSD-----PTLSALLHWEMRFNIIIGIARGLLYLHQDSRL 509
                         + E             +      +    +   +   + YL      
Sbjct: 63  QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK--- 119

Query: 510 RIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASS 549
           + +HRDL   N L++ +   K+SDFGL+  ++D +  +S 
Sbjct: 120 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV 159

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.7 bits (92), Expect = 6e-04
 Identities = 8/46 (17%), Positives = 16/46 (34%)

Query: 537 ALDMMDQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIML 582
             + + Q L          K   +   C  E  ++RPT   ++  +
Sbjct: 210 TAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNI 255

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 95.9 bits (238), Expect = 9e-23
 Identities = 33/159 (20%), Positives = 58/159 (36%), Gaps = 19/159 (11%)

Query: 405 DNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIETSNS------- 457
              +   ++G G FG V+   +    ++A+K +        E+F  E E           
Sbjct: 5   SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLV 63

Query: 458 ---NATIGANVKAFVREMKTFSD-----PTLSALLHWEMRFNIIIGIARGLLYLHQDSRL 509
                 +       V E            T   L   E    + + +  G+ YL +    
Sbjct: 64  QLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE---A 120

Query: 510 RIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHAS 548
            +IHRDL   N L+ +    K+SDFG+   ++D +  +S
Sbjct: 121 CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 159

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 95.9 bits (238), Expect = 1e-22
 Identities = 37/215 (17%), Positives = 71/215 (33%), Gaps = 36/215 (16%)

Query: 405 DNFSEANKLGKGGFGPVYKAKFPG-GQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGA 463
            + +  +KLG G +G VY+  +      +AVK L   + + +EEF  E            
Sbjct: 17  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKE-----I 70

Query: 464 NVKAFVREMKTFSDPTLSAL---------------------LHWEMRFNIIIGIARGLLY 502
                V+ +   +      +                     +   +   +   I+  + Y
Sbjct: 71  KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 130

Query: 503 LHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSKPNEILKCINVGL 562
           L    +   IHRDL   N L+ +    K++DFGL+  M      A +          +  
Sbjct: 131 LE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA-----KFPIKW 182

Query: 563 LCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAF 597
              +    ++ ++   V   G     +AT     +
Sbjct: 183 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 217

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.9 bits (103), Expect = 3e-05
 Identities = 8/51 (15%), Positives = 20/51 (39%)

Query: 532 SDFGLALDMMDQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIML 582
            D     +++++            K   +   C Q +P+DRP+ +++    
Sbjct: 220 IDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 270

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 95.1 bits (236), Expect = 2e-22
 Identities = 40/162 (24%), Positives = 63/162 (38%), Gaps = 28/162 (17%)

Query: 392 LPFIDFESILAATDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLS-SASGQGLEEFK 449
           +PF++         ++     LG+G +G V  A      + +AVK +    +    E  K
Sbjct: 1   VPFVE---------DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK 51

Query: 450 NEIETSNS----------NATIGANVKAFVREM----KTFSDPTLSALLHWEMRFNIIIG 495
            EI  +                  N++    E     + F        +           
Sbjct: 52  KEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 111

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           +  G++YLH    + I HRD+K  N+LLD+  N KISDFGLA
Sbjct: 112 LMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLA 150

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.1 bits (233), Expect = 1e-21
 Identities = 46/223 (20%), Positives = 82/223 (36%), Gaps = 38/223 (17%)

Query: 400 ILAATDNFSEANKLGKGGFGPVYKAKFPGGQQ-----IAVKRLS-SASGQGLEEFKNEIE 453
           IL  T+ F +   LG G FG VYK  +    +     +A+K L  + S +  +E  +E  
Sbjct: 5   ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 63

Query: 454 TSNSNATIGANVKAFVREMKTFSDPTLSALLH-------------------WEMRFNIII 494
              S      +     R +      T+  +                      +   N  +
Sbjct: 64  VMAS-----VDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 118

Query: 495 GIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSKPNEI 554
            IA+G+ YL      R++HRDL   N+L+    + KI+DFGLA  +  ++    ++    
Sbjct: 119 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-- 173

Query: 555 LKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAF 597
              + +  + ++   +   T    V   G     L T     +
Sbjct: 174 --KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 214

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.7 bits (232), Expect = 1e-21
 Identities = 38/194 (19%), Positives = 66/194 (34%), Gaps = 45/194 (23%)

Query: 392 LPFIDFESILAATDNFSEANKLGKGGFGPVYKAKFPGG---QQIAVKRLS-SASGQGLEE 447
            P +D+       ++    + +G+G FG V KA+          A+KR+   AS     +
Sbjct: 4   YPVLDW-------NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRD 56

Query: 448 FKNEIET-------------------------------SNSNATIGANVKAFVREMKTFS 476
           F  E+E                                  +        +    +     
Sbjct: 57  FAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAI 116

Query: 477 DPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGL 536
             + ++ L  +   +    +ARG+ YL Q    + IHRDL   NIL+ +    KI+DFGL
Sbjct: 117 ANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGL 173

Query: 537 ALDMMDQKLHASSK 550
           +            +
Sbjct: 174 SRGQEVYVKKTMGR 187

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 93.3 bits (231), Expect = 3e-21
 Identities = 45/165 (27%), Positives = 65/165 (39%), Gaps = 28/165 (16%)

Query: 405 DNFSEANKLGKGGFGPVYKAKFPG-GQQIAVKRLSSA---SGQGLEEFKNEIETSNSNAT 460
           ++FS    +G+GGFG VY  +    G+  A+K L        QG     NE    +  +T
Sbjct: 4   NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 63

Query: 461 IGANVKAFVREMKTFSDP-------------TLSALLH------WEMRFNIIIGIARGLL 501
              +    V     F  P              L   L                 I  GL 
Sbjct: 64  G--DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLE 121

Query: 502 YLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLH 546
           ++H      +++RDLK +NILLD+  + +ISD GLA D   +K H
Sbjct: 122 HMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH 163

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.6 bits (224), Expect = 1e-20
 Identities = 44/233 (18%), Positives = 66/233 (28%), Gaps = 47/233 (20%)

Query: 405 DNFSEANKLGKGGFGPVYKAKFPG------GQQIAVKRLSSASGQG-LEEFKNEIET--- 454
           +  S    LG G FG V +A   G         +AVK L  ++     E   +E++    
Sbjct: 23  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82

Query: 455 ------------------------------SNSNATIGANVKAFVREMKTFSDPTLSALL 484
                                            N            +            L
Sbjct: 83  LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 142

Query: 485 HWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQK 544
             E   +    +A+G+ +L        IHRDL   NILL      KI DFGLA D+ +  
Sbjct: 143 DLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDS 199

Query: 545 LHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAF 597
            +           + V  +  +   N   T    V   G     L +     +
Sbjct: 200 NYVVKGNA----RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY 248

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.3 bits (101), Expect = 5e-05
 Identities = 10/56 (17%), Positives = 20/56 (35%)

Query: 527 MNPKISDFGLALDMMDQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIML 582
             P +        M+ +     S  +   +  ++   C   DP  RPT   +V ++
Sbjct: 247 PYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLI 302

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.9 bits (222), Expect = 2e-20
 Identities = 40/184 (21%), Positives = 62/184 (33%), Gaps = 42/184 (22%)

Query: 405 DNFSEANKLGKGGFGPVYKAKFPG------GQQIAVKRLSSASGQG-LEEFKNEIE---- 453
           D       LG+G FG V +A   G       + +AVK L   +         +E++    
Sbjct: 13  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 72

Query: 454 ---------------TSNSNATI------GANVKAFVREMKTFSDPTLSA-------LLH 485
                                 +        N+  ++R  +    P   A        L 
Sbjct: 73  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 132

Query: 486 WEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKL 545
            E        +A+G+ +L      + IHRDL   NILL ++   KI DFGLA D+     
Sbjct: 133 LEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 189

Query: 546 HASS 549
           +   
Sbjct: 190 YVRK 193

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.5 bits (91), Expect = 7e-04
 Identities = 11/56 (19%), Positives = 21/56 (37%)

Query: 529 PKISDFGLALDMMDQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGS 584
           P +         + +     +      +     L C   +P+ RPT S++V  LG+
Sbjct: 238 PGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 293

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.7 bits (222), Expect = 2e-20
 Identities = 34/160 (21%), Positives = 67/160 (41%), Gaps = 17/160 (10%)

Query: 404 TDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQGLEEFKNEIETSNS----- 457
              ++   K+G+G  G VY A     GQ++A+++++       E   NEI          
Sbjct: 19  KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78

Query: 458 -----NATIGANVKAFVREM---KTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRL 509
                ++ +  +    V E     + +D      +       +     + L +LH     
Sbjct: 79  IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHS---N 135

Query: 510 RIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASS 549
           ++IHRD+K+ NILL  + + K++DFG    +  ++   S+
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST 175

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.2 bits (223), Expect = 2e-20
 Identities = 41/215 (19%), Positives = 65/215 (30%), Gaps = 60/215 (27%)

Query: 377 VDSDQFKEEEKQGIDLPFIDFESILAATDNFSEANKLGKGGFGPVYKAKFPG------GQ 430
           VD  +++ + K                 +N      LG G FG V  A   G        
Sbjct: 21  VDFREYEYDLKWEFPR------------ENLEFGKVLGSGAFGKVMNATAYGISKTGVSI 68

Query: 431 QIAVKRLSSASGQG-LEEFKNEIETS---------------------------------- 455
           Q+AVK L   +     E   +E++                                    
Sbjct: 69  QVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDL 128

Query: 456 ----NSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRI 511
                S     +  +      K   +     +L +E        +A+G+ +L        
Sbjct: 129 LNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSC 185

Query: 512 IHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLH 546
           +HRDL   N+L+      KI DFGLA D+M    +
Sbjct: 186 VHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNY 220

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.6 bits (102), Expect = 4e-05
 Identities = 8/57 (14%), Positives = 16/57 (28%)

Query: 529 PKISDFGLALDMMDQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSE 585
           P I        ++              +   +   C   D   RP+  ++   LG +
Sbjct: 268 PGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQ 324

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.1 bits (220), Expect = 3e-20
 Identities = 35/166 (21%), Positives = 55/166 (33%), Gaps = 24/166 (14%)

Query: 405 DNFSEANKLGKGGFGPVYKAKFPGGQQ-----IAVKRLS-SASGQGLEEFKNEIET---- 454
              +    +G G FG VYK             +A+K L    + +   +F  E       
Sbjct: 7   SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF 66

Query: 455 --SNSNATIGA----NVKAFVREMKTFSDPTL-----SALLHWEMRFNIIIGIARGLLYL 503
              N     G          + E                         ++ GIA G+ YL
Sbjct: 67  SHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYL 126

Query: 504 HQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASS 549
                +  +HRDL   NIL++  +  K+SDFGL+  + D      +
Sbjct: 127 A---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYT 169

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.8 bits (110), Expect = 4e-06
 Identities = 7/46 (15%), Positives = 19/46 (41%)

Query: 537 ALDMMDQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIML 582
            +  ++      +  +       + + C Q++   RP  +D+V +L
Sbjct: 222 VMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSIL 267

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.6 bits (219), Expect = 4e-20
 Identities = 36/168 (21%), Positives = 61/168 (36%), Gaps = 24/168 (14%)

Query: 403 ATDNFSEAN-KLGKGGFGPVYKAKF---PGGQQIAVKRLSSASGQG-LEEFKNEIET--S 455
             DN   A+ +LG G FG V +  +        +A+K L   + +   EE   E +    
Sbjct: 6   KRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQ 65

Query: 456 NSNATIGANVKAFVREMKTF------SDPTLSALLH-------WEMRFNIIIGIARGLLY 502
             N  I   +    +               L   L              ++  ++ G+ Y
Sbjct: 66  LDNPYI-VRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKY 124

Query: 503 LHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSK 550
           L +      +HRDL   N+LL      KISDFGL+  +     + +++
Sbjct: 125 LEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTAR 169

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.7 bits (92), Expect = 7e-04
 Identities = 9/55 (16%), Positives = 18/55 (32%)

Query: 538 LDMMDQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATP 592
           +  ++Q       P    +   +   C      DRP    V   + +   +LA+ 
Sbjct: 222 MAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASK 276

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.1 bits (218), Expect = 5e-20
 Identities = 37/154 (24%), Positives = 54/154 (35%), Gaps = 33/154 (21%)

Query: 411 NKLGKGGFGPVYKAKFPG-GQQIAVKRLS--SASGQGLEEFKNEIETSNSNATIGANVKA 467
            ++G+G F  VYK        ++A   L     +    + FK E E              
Sbjct: 15  IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKG-----LQHPN 69

Query: 468 FVREMKTFSDP-----------------TLSALLH------WEMRFNIIIGIARGLLYLH 504
            VR   ++                    TL   L        ++  +    I +GL +LH
Sbjct: 70  IVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLH 129

Query: 505 QDSRLRIIHRDLKTSNILLDQE-MNPKISDFGLA 537
             +   IIHRDLK  NI +     + KI D GLA
Sbjct: 130 TRTP-PIIHRDLKCDNIFITGPTGSVKIGDLGLA 162

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.4 bits (216), Expect = 9e-20
 Identities = 32/159 (20%), Positives = 58/159 (36%), Gaps = 27/159 (16%)

Query: 405 DNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIET----SNSNAT 460
                   +GKG FG V    +  G ++AVK + + +    + F  E        +SN  
Sbjct: 7   KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSN-- 61

Query: 461 IGANVKAFVRE-------MKTFSDPTLSALLH--------WEMRFNIIIGIARGLLYLHQ 505
           +   +   V E        +  +  +L   L          +      + +   + YL  
Sbjct: 62  LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE- 120

Query: 506 DSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQK 544
                 +HRDL   N+L+ ++   K+SDFGL  +    +
Sbjct: 121 --GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ 157

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.7 bits (214), Expect = 2e-19
 Identities = 39/177 (22%), Positives = 67/177 (37%), Gaps = 31/177 (17%)

Query: 394 FIDFESILAATDNFSEANKLGKGGFGPVYKAKFPG---GQQIAVKRLSSASGQG--LEEF 448
           ++D + +        E  +LG G FG V K  +      + +AVK L + +      +E 
Sbjct: 2   YLDRKLL------TLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDEL 55

Query: 449 KNEIET----SNSN-----ATIGANVKAFVREMKTFSDPTLSALLH------WEMRFNII 493
             E        N           A     V EM       L+  L        +    ++
Sbjct: 56  LAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGP--LNKYLQQNRHVKDKNIIELV 113

Query: 494 IGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSK 550
             ++ G+ YL +      +HRDL   N+LL  +   KISDFGL+  +   + +  ++
Sbjct: 114 HQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 167

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.0 bits (212), Expect = 6e-19
 Identities = 42/194 (21%), Positives = 75/194 (38%), Gaps = 29/194 (14%)

Query: 377 VDSDQFKEEEKQGIDLPFIDFESILAATDNFSEANKLGKGGFGPVYKAKFPG----GQQI 432
           +D      E  Q +    I   S+     +F+E   +G+G FG VY              
Sbjct: 4   IDLSALNPELVQAVQHVVIGPSSL---IVHFNE--VIGRGHFGCVYHGTLLDNDGKKIHC 58

Query: 433 AVKRLSSASGQG-LEEFKNEIET------SNSNATIGANVKA-----FVREMKTFSD--- 477
           AVK L+  +  G + +F  E          N  + +G  +++      V       D   
Sbjct: 59  AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 118

Query: 478 --PTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFG 535
                +     +      + +A+G   +   +  + +HRDL   N +LD++   K++DFG
Sbjct: 119 FIRNETHNPTVKDLIGFGLQVAKG---MKFLASKKFVHRDLAARNCMLDEKFTVKVADFG 175

Query: 536 LALDMMDQKLHASS 549
           LA DM D++  +  
Sbjct: 176 LARDMYDKEFDSVH 189

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.1 bits (93), Expect = 5e-04
 Identities = 7/27 (25%), Positives = 11/27 (40%)

Query: 556 KCINVGLLCVQEDPNDRPTMSDVVIML 582
               V L C       RP+ S++V  +
Sbjct: 262 PLYEVMLKCWHPKAEMRPSFSELVSRI 288

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.8 bits (209), Expect = 7e-19
 Identities = 41/214 (19%), Positives = 68/214 (31%), Gaps = 27/214 (12%)

Query: 405 DNFSEANKLGKGGFGPVYKAKFPG----GQQIAVKRLS---SASGQGLEEFKNEIETSNS 457
            +     KLG G FG V + ++         +AVK L     +  + +++F  E+   +S
Sbjct: 8   KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67

Query: 458 ----------NATIGANVKAFVREMKTFSDPTL----SALLHWEMRFNIIIGIARGLLYL 503
                        +   +K         S                     + +A G+ YL
Sbjct: 68  LDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYL 127

Query: 504 HQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSKPNEILKCINVGLL 563
                 R IHRDL   N+LL      KI DFGL   +     H   + +  +        
Sbjct: 128 ES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 184

Query: 564 CVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAF 597
            ++         SD   M G     + T  +  +
Sbjct: 185 SLKTRTFSHA--SD-TWMFGVTLWEMFTYGQEPW 215

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.0 bits (90), Expect = 0.001
 Identities = 9/27 (33%), Positives = 11/27 (40%)

Query: 556 KCINVGLLCVQEDPNDRPTMSDVVIML 582
              NV + C    P DRPT   +   L
Sbjct: 243 DIYNVMVQCWAHKPEDRPTFVALRDFL 269

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 85.9 bits (212), Expect = 1e-18
 Identities = 36/194 (18%), Positives = 69/194 (35%), Gaps = 37/194 (19%)

Query: 380 DQFKEEEKQGIDLPFIDFESILAATDNFSEANKLGKGGFGPVYKAKFPG-GQQIAVKRLS 438
           D +K+   Q +++     + +L   D++    +LG G FG V++      G   A K + 
Sbjct: 7   DIWKQYYPQPVEIKH---DHVL---DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVM 60

Query: 439 SASGQGLEEFKNEIETSNSNATIGANVKAFVREMKTFSDP-------------TLSALLH 485
           +      E  + EI+T +            V     F D               L   + 
Sbjct: 61  TPHESDKETVRKEIQTMSV-----LRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVA 115

Query: 486 -------WEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNP--KISDFGL 536
                   +     +  + +GL ++H       +H DLK  NI+   + +   K+ DFGL
Sbjct: 116 DEHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGL 172

Query: 537 ALDMMDQKLHASSK 550
              +  ++    + 
Sbjct: 173 TAHLDPKQSVKVTT 186

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 84.0 bits (207), Expect = 1e-18
 Identities = 36/158 (22%), Positives = 59/158 (37%), Gaps = 28/158 (17%)

Query: 405 DNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQGL---------EEFKNEIET 454
           +N+     LG+G    V +    P  ++ AVK +    G            E    E++ 
Sbjct: 3   ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 62

Query: 455 SNSNATIGANVK---AFVREMKTF------SDPTLSALLH------WEMRFNIIIGIARG 499
               +     ++    +      F          L   L        +    I+  +   
Sbjct: 63  LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEV 122

Query: 500 LLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           +  LH   +L I+HRDLK  NILLD +MN K++DFG +
Sbjct: 123 ICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFS 157

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 84.8 bits (209), Expect = 2e-18
 Identities = 40/166 (24%), Positives = 62/166 (37%), Gaps = 21/166 (12%)

Query: 405 DNFSEANKLGKGGFGPVYKAKFPG-GQQIAVKRLS---SASGQGLEEFKNEIETSNS--- 457
            +F     LG G FG V+  +    G+  A+K L        + +E   +E    +    
Sbjct: 4   QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTH 63

Query: 458 -----------NATIGANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQD 506
                      +A     +  ++   + FS    S      +       +   L YLH  
Sbjct: 64  PFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLH-- 121

Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSKPN 552
               II+RDLK  NILLD+  + KI+DFG A  + D        P+
Sbjct: 122 -SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPD 166

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.5 bits (203), Expect = 5e-18
 Identities = 34/165 (20%), Positives = 62/165 (37%), Gaps = 22/165 (13%)

Query: 405 DNFSEANKLGKGGFGPVYKAKFPGGQQ----IAVKRLSSASGQGL-EEFKNEIET----S 455
           +       +G+G FG V++  +   +     +A+K   + +   + E+F  E  T     
Sbjct: 7   ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 66

Query: 456 NSN-----ATIGANVKAFVREMKTFSD-----PTLSALLHWEMRFNIIIGIARGLLYLHQ 505
           + +       I  N    + E+ T  +           L           ++  L YL  
Sbjct: 67  HPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE- 125

Query: 506 DSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSK 550
               R +HRD+   N+L+      K+ DFGL+  M D   + +SK
Sbjct: 126 --SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 168

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.6 bits (203), Expect = 7e-18
 Identities = 40/224 (17%), Positives = 77/224 (34%), Gaps = 38/224 (16%)

Query: 405 DNFSEANKLGKGGFGPVYKAKFPG------GQQIAVKRLS-SASGQGLEEFKNEIETSNS 457
           +  + + +LG+G FG VY+    G        ++A+K ++ +AS +   EF NE      
Sbjct: 20  EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 79

Query: 458 ----------NATIGANVKAFVRE--------------MKTFSDPTLSALLHWEMRFNII 493
                                + E                  ++  + A         + 
Sbjct: 80  FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMA 139

Query: 494 IGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSKPNE 553
             IA G+ YL+ +   + +HRDL   N ++ ++   KI DFG+  D+ +   +       
Sbjct: 140 GEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK-- 194

Query: 554 ILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLATPKRPAF 597
               + V  +  +   +   T    V   G     +AT     +
Sbjct: 195 --GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY 236

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.6 bits (203), Expect = 1e-17
 Identities = 39/153 (25%), Positives = 62/153 (40%), Gaps = 22/153 (14%)

Query: 404 TDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQG-LEEFKNEIET------S 455
              ++  + +G+G +G V  A       ++A+K++S    Q   +    EI+        
Sbjct: 7   GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 66

Query: 456 NSNATIGANVKAFVREMKT------FSDPTLSALLH-----WEMRFNIIIGIARGLLYLH 504
           N            + +MK            L  LL       +     +  I RGL Y+H
Sbjct: 67  NIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIH 126

Query: 505 QDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
                 ++HRDLK SN+LL+   + KI DFGLA
Sbjct: 127 S---ANVLHRDLKPSNLLLNTTCDLKICDFGLA 156

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.5 bits (200), Expect = 1e-17
 Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 21/151 (13%)

Query: 405 DNFSEANKLGKGGFGPVYKAKFPG-GQQIAVK--RLSSASGQGLEEFKNEIETSNS---- 457
           +NF +  K+G+G +G VYKA+    G+ +A+K  RL + +         EI         
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61

Query: 458 ------NATIGANVKAFVREM-----KTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQD 506
                 +     N    V E      K F D +    +   +  + +  + +GL + H  
Sbjct: 62  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121

Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
              R++HRDLK  N+L++ E   K++DFGLA
Sbjct: 122 ---RVLHRDLKPQNLLINTEGAIKLADFGLA 149

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 80.3 bits (197), Expect = 3e-17
 Identities = 38/149 (25%), Positives = 59/149 (39%), Gaps = 19/149 (12%)

Query: 405 DNFSEANKLGKGGFGPVYKAKFPGGQQIAVK--RLSSASGQGLEEFKNEIETSNS----- 457
           + +    K+G+G +G VYKA+   G+  A+K  RL             EI          
Sbjct: 2   EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61

Query: 458 -----NATIGANVKAFVREMKTFSDPTL----SALLHWEMRFNIIIGIARGLLYLHQDSR 508
                +          V E        L       L      + ++ +  G+ Y H    
Sbjct: 62  IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD--- 118

Query: 509 LRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            R++HRDLK  N+L+++E   KI+DFGLA
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGLA 147

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 80.5 bits (198), Expect = 5e-17
 Identities = 34/165 (20%), Positives = 56/165 (33%), Gaps = 31/165 (18%)

Query: 405 DNFSEANKLGKGGFGPVYKAKFPG-GQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGA 463
           D +    +LG G FG V++      G+    K +++         KNEI   N       
Sbjct: 29  DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQ-----L 83

Query: 464 NVKAFVREMKTFSDP-------------TLSALLH-------WEMRFNIIIGIARGLLYL 503
           +    +     F D               L   +             N +     GL ++
Sbjct: 84  HHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHM 143

Query: 504 HQDSRLRIIHRDLKTSNILLDQEMNP--KISDFGLALDMMDQKLH 546
           H      I+H D+K  NI+ + +     KI DFGLA  +   ++ 
Sbjct: 144 H---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV 185

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.9 bits (194), Expect = 8e-17
 Identities = 38/166 (22%), Positives = 62/166 (37%), Gaps = 25/166 (15%)

Query: 405 DNFSEANKLGKGGFGPVYKAK-FPGGQQIAVKRLS---SASGQGLEEFKNEIETSNSNAT 460
           ++F     LG+G F  V  A+     ++ A+K L          +     E +  +    
Sbjct: 8   EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR--- 64

Query: 461 IGANVKAFVREMKTFSDP-------------TLSALLHWEMRFN---IIIGIARGLLYLH 504
              +   FV+   TF D               L   +     F+        A  +  L 
Sbjct: 65  --LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALE 122

Query: 505 QDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSK 550
                 IIHRDLK  NILL+++M+ +I+DFG A  +  +   A + 
Sbjct: 123 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 168

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.6 bits (195), Expect = 9e-17
 Identities = 40/177 (22%), Positives = 73/177 (41%), Gaps = 28/177 (15%)

Query: 390 IDLPFIDFESILAATDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRL--SSASGQGLE 446
           ++ PF D          + +  K+G+G FG V+KA+    GQ++A+K++   +       
Sbjct: 1   VECPFCDE------VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPI 54

Query: 447 EFKNEIE------------------TSNSNATIGANVKAFVREMKTFSDPTLSALLHWEM 488
               EI+                  T  S           V +        L + +  + 
Sbjct: 55  TALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKF 114

Query: 489 RFNIIIGIARGLL-YLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQK 544
             + I  + + LL  L+   R +I+HRD+K +N+L+ ++   K++DFGLA      K
Sbjct: 115 TLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAK 171

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.4 bits (195), Expect = 1e-16
 Identities = 34/154 (22%), Positives = 59/154 (38%), Gaps = 15/154 (9%)

Query: 405 DNFSEANKLGKGGFGPVYKAKFPG-GQQIAVKRLS---SASGQGLEEFKNEIET-SNSNA 459
           ++F     LGKG FG V   +    G+  A+K L      +   +     E     N+  
Sbjct: 5   NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64

Query: 460 TIGANVKAFVRE-------MKTFSDPTLSALLHWEMRFN---IIIGIARGLLYLHQDSRL 509
                +K   +        M+  +   L   L  E  F         A  +  L      
Sbjct: 65  PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 124

Query: 510 RIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQ 543
            +++RD+K  N++LD++ + KI+DFGL  + +  
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD 158

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 79.1 bits (194), Expect = 1e-16
 Identities = 40/165 (24%), Positives = 57/165 (34%), Gaps = 21/165 (12%)

Query: 405 DNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLS---SASGQGLEEFKNEIET------ 454
           D F     LG G FG V   K    G   A+K L        + +E   NE         
Sbjct: 41  DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100

Query: 455 --------SNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQD 506
                   S  + +    V  +V   + FS                   I     YLH  
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS- 159

Query: 507 SRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSKP 551
             L +I+RDLK  N+L+DQ+   +++DFG A  +  +       P
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTP 202

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.4 bits (192), Expect = 2e-16
 Identities = 42/173 (24%), Positives = 71/173 (41%), Gaps = 30/173 (17%)

Query: 403 ATDNFSEANKLGKGGFGPVYKAKF--PGGQQIAVKRLSSASGQG--LEEFKNEIETSNSN 458
           A   +    ++G+G +G V+KA+    GG+ +A+KR+   +G+         E+      
Sbjct: 5   ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 64

Query: 459 ATIG-ANVKAFV----------------------REMKTFSDPTLSALLHWEMRFNIIIG 495
            T    NV                          +++ T+ D      +  E   +++  
Sbjct: 65  ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ 124

Query: 496 IARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHAS 548
           + RGL +LH     R++HRDLK  NIL+      K++DFGLA     Q    S
Sbjct: 125 LLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTS 174

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.1 bits (194), Expect = 2e-16
 Identities = 32/169 (18%), Positives = 61/169 (36%), Gaps = 32/169 (18%)

Query: 405 DNFSEANKLGKGGFGPVYKAKFPG-GQQIAVKRLSSASGQGLEEFKNEIETSNS------ 457
            ++++   +G G FG VY+AK    G+ +A+K++             E++          
Sbjct: 20  VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNI 75

Query: 458 --------NATIGANVKAFVREMKTFSDPTLSALLH---------WEMRFNIIIGIARGL 500
                   ++    +       +    +       H                +  + R L
Sbjct: 76  VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135

Query: 501 LYLHQDSRLRIIHRDLKTSNILLDQE-MNPKISDFGLALDMMDQKLHAS 548
            Y+H      I HRD+K  N+LLD +    K+ DFG A  ++  + + S
Sbjct: 136 AYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.7 bits (193), Expect = 2e-16
 Identities = 44/211 (20%), Positives = 79/211 (37%), Gaps = 23/211 (10%)

Query: 405 DNFSEANKLGKGGFGPVYKAK----FPGGQQIAVKRLSSAS----GQGLEEFKNEIET-- 454
           +NF     LG G +G V+  +       G+  A+K L  A+     +  E  + E +   
Sbjct: 24  ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 83

Query: 455 --SNSNATI-----GANVKAFVREMKTFSDPTLSALLHWEMRFN---IIIGIARGLLYLH 504
               S   +               +   +   L   L    RF    + I +   +L L 
Sbjct: 84  HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALE 143

Query: 505 QDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHASSKPNEILKCINVGLLC 564
              +L II+RD+K  NILLD   +  ++DFGL+ + +  +   +      ++ +   ++ 
Sbjct: 144 HLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVR 203

Query: 565 VQEDPNDRPTMSDVVIMLGSEAMNLATPKRP 595
             +  +D+    D    LG     L T   P
Sbjct: 204 GGDSGHDKA--VD-WWSLGVLMYELLTGASP 231

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.5 bits (187), Expect = 7e-16
 Identities = 34/161 (21%), Positives = 62/161 (38%), Gaps = 20/161 (12%)

Query: 405 DNFSEANKLGKGGFGPVYKAKF-PGGQQIAVK--RLSSASGQGLEEFKNEIET------- 454
             + +  K+G+G +G V+KAK     + +A+K  RL             EI         
Sbjct: 2   QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61

Query: 455 -------SNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDS 507
                     +      V  F  +       + +  L  E+  + +  + +GL + H   
Sbjct: 62  NIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS-- 119

Query: 508 RLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLHAS 548
              ++HRDLK  N+L+++    K+++FGLA          S
Sbjct: 120 -RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYS 159

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.1 bits (186), Expect = 8e-16
 Identities = 41/185 (22%), Positives = 71/185 (38%), Gaps = 43/185 (23%)

Query: 405 DNFSEANKLGKGGFGPVYKAKFPG--------GQQIAVKRL-SSASGQGLEEFKNEIE-- 453
           D       LG+G FG V  A+  G          ++AVK L S A+ + L +  +E+E  
Sbjct: 13  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 72

Query: 454 ----------------TSNSNATI------GANVKAFVREMKTFSDPTLSALLH------ 485
                           T +    +        N++ +++  +           H      
Sbjct: 73  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 132

Query: 486 -WEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQK 544
             +   +    +ARG+ YL      + IHRDL   N+L+ ++   KI+DFGLA D+    
Sbjct: 133 SSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 189

Query: 545 LHASS 549
            +  +
Sbjct: 190 YYKKT 194

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 73.7 bits (180), Expect = 9e-16
 Identities = 22/152 (14%), Positives = 51/152 (33%), Gaps = 27/152 (17%)

Query: 411 NKLGKGGFGPVYKAKFPGGQQIAVK--RLSSASGQGLEEFKNEIETSNSNATIGANVKAF 468
             +G+G    V+        +  VK  ++   S + ++E ++  +   S   I  + +  
Sbjct: 6   KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAI-RSARNE 64

Query: 469 VREMKTFSDPTLSALL--------------------HWEMRFNIIIGIARGLLYLHQDSR 508
            R ++      +  +                       E    ++  I   +   +    
Sbjct: 65  FRALQKLQGLAVPKVYAWEGNAVLMELIDAKELYRVRVENPDEVLDMILEEVAKFYHR-- 122

Query: 509 LRIIHRDLKTSNILLDQEMNPKISDFGLALDM 540
             I+H DL   N+L+  E    I DF  ++++
Sbjct: 123 -GIVHGDLSQYNVLVS-EEGIWIIDFPQSVEV 152

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 74.8 bits (183), Expect = 2e-15
 Identities = 29/163 (17%), Positives = 57/163 (34%), Gaps = 26/163 (15%)

Query: 412 KLGKGGFGPVYKAK-FPGGQQIAVKRLSSASGQGLEEFKNEIETSN--SNATIGANVKAF 468
           ++G+G FG +++       QQ+A+K     S     + ++E  T    +  T   NV  F
Sbjct: 12  RIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA--PQLRDEYRTYKLLAGCTGIPNVYYF 69

Query: 469 ---------VREMKTFSDPTL----SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRD 515
                    V ++   S   L          +        +   +  +H+     +++RD
Sbjct: 70  GQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHE---KSLVYRD 126

Query: 516 LKTSNILLDQEMNP-----KISDFGLALDMMDQKLHASSKPNE 553
           +K  N L+ +  +       + DFG+     D          E
Sbjct: 127 IKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYRE 169

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.2 bits (184), Expect = 2e-15
 Identities = 41/158 (25%), Positives = 65/158 (41%), Gaps = 22/158 (13%)

Query: 405 DNFSEANKLGKGGFGPVYKAKFPG-GQQIAVKRLS---SASGQGLEEFKNEIET---SNS 457
           ++F     LGKG FG V+ A+F    Q  A+K L          +E    E      +  
Sbjct: 2   EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 61

Query: 458 NATIGANVKAFVRE------MKTFSDPTLSALLHWEMRFN------IIIGIARGLLYLHQ 505
           +  +      F  +      M+  +   L   +    +F+          I  GL +LH 
Sbjct: 62  HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLH- 120

Query: 506 DSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQ 543
                I++RDLK  NILLD++ + KI+DFG+  + M  
Sbjct: 121 --SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG 156

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.4 bits (179), Expect = 7e-15
 Identities = 41/153 (26%), Positives = 63/153 (41%), Gaps = 23/153 (15%)

Query: 411 NKLGKGGFGPVYKAKFPG-GQQIAVKRLSSASGQGLEE-----FKNEIET------SNSN 458
           + LG+G F  VYKA+     Q +A+K++        ++        EI+        N  
Sbjct: 4   DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 63

Query: 459 ATIGAN--------VKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLR 510
             + A         V  F+           S +L        ++   +GL YLHQ     
Sbjct: 64  GLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH---W 120

Query: 511 IIHRDLKTSNILLDQEMNPKISDFGLALDMMDQ 543
           I+HRDLK +N+LLD+    K++DFGLA      
Sbjct: 121 ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP 153

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.2 bits (174), Expect = 4e-14
 Identities = 28/153 (18%), Positives = 49/153 (32%), Gaps = 26/153 (16%)

Query: 405 DNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQGLEEFKNEIETSNS------ 457
           + +  A  LG+G FG V++       +    K +    G      K EI   N       
Sbjct: 5   EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVK-VKGTDQVLVKKEISILNIARHRNI 63

Query: 458 ----NATIGANVKAFVREMKTFSDPTLSALLH-------WEMRFNIIIGIARGLLYLHQD 506
                +         + E    S   +   ++            + +  +   L +LH  
Sbjct: 64  LHLHESFESMEELVMIFEF--ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHS- 120

Query: 507 SRLRIIHRDLKTSNILLDQEMNP--KISDFGLA 537
               I H D++  NI+     +   KI +FG A
Sbjct: 121 --HNIGHFDIRPENIIYQTRRSSTIKIIEFGQA 151

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 67.8 bits (165), Expect = 4e-13
 Identities = 36/163 (22%), Positives = 63/163 (38%), Gaps = 29/163 (17%)

Query: 404 TDNFSEANKLGKGGFGPVYKAKFPG-GQQIAVKRLSSASGQG---LEEFKNEIET----- 454
           +D +     LG GG   V+ A+     + +AVK L +   +       F+ E +      
Sbjct: 6   SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 65

Query: 455 ---------SNSNATIGANVKAFVREMKTFSDPTLSALLH------WEMRFNIIIGIARG 499
                    +    T    +   V  M+     TL  ++H       +    +I    + 
Sbjct: 66  HPAIVAVYDTGEAETPAGPLPYIV--MEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQA 123

Query: 500 LLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMD 542
           L + H   +  IIHRD+K +NI++      K+ DFG+A  + D
Sbjct: 124 LNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIAD 163

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 67.9 bits (165), Expect = 5e-13
 Identities = 29/155 (18%), Positives = 48/155 (30%), Gaps = 24/155 (15%)

Query: 412 KLGKGGFGPVYKAK-FPGGQQIAVKRLSSASGQGLEEFKNEIET---------------S 455
           K+G G FG +Y       G+++A+K     +     +   E +                 
Sbjct: 14  KIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWC 71

Query: 456 NSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRD 515
            +       V   +           S     +    +   +   + Y+H       IHRD
Sbjct: 72  GAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRD 128

Query: 516 LKTSNIL---LDQEMNPKISDFGLALDMMDQKLHA 547
           +K  N L     +     I DFGLA    D + H 
Sbjct: 129 VKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQ 163

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.0 bits (163), Expect = 7e-13
 Identities = 41/245 (16%), Positives = 67/245 (27%), Gaps = 81/245 (33%)

Query: 412 KLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQGLEEFKNEIETSNSN---ATIGANVKA 467
            LG GGFG VY          +A+K +         E  N             + +    
Sbjct: 11  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70

Query: 468 FVREMKTFSDPTLSAL--------------------LHWEMRFNIIIGIARGLLYLHQDS 507
            +R +  F  P    L                    L  E+  +    +   + + H   
Sbjct: 71  VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN-- 128

Query: 508 RLRIIHRDLKTSNILLDQE-MNPKISDFGLALDMMDQKLHAS------------------ 548
              ++HRD+K  NIL+D      K+ DFG    + D                        
Sbjct: 129 -CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYH 187

Query: 549 -----------------------SKPNEILK------------CINVGLLCVQEDPNDRP 573
                                      EI++            C ++   C+   P+DRP
Sbjct: 188 GRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRP 247

Query: 574 TMSDV 578
           T  ++
Sbjct: 248 TFEEI 252

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 67.6 bits (164), Expect = 8e-13
 Identities = 39/190 (20%), Positives = 76/190 (40%), Gaps = 36/190 (18%)

Query: 378 DSDQFKEEEKQGIDLPFIDFESILAATDNFSEANKLGKGGFGPVYKAK-FPGGQQIAVKR 436
           D +  +  E    +   +++ +     D++    KLG+G +  V++A      +++ VK 
Sbjct: 12  DVNTHRPREYWDYESHVVEWGNQ----DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKI 67

Query: 437 LSSASGQGLEEFKNEIETSNSNATIGANVKAFVREMKTFSDPT----------------- 479
           L        ++ K EI+    N   G N+   +       DP                  
Sbjct: 68  LKPVK---KKKIKREIKI-LENLRGGPNI---ITLADIVKDPVSRTPALVFEHVNNTDFK 120

Query: 480 --LSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQE-MNPKISDFGL 536
                L  +++RF  +  I + L Y H    + I+HRD+K  N+++D E    ++ D+GL
Sbjct: 121 QLYQTLTDYDIRF-YMYEILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGL 176

Query: 537 ALDMMDQKLH 546
           A      + +
Sbjct: 177 AEFYHPGQEY 186

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.0 bits (160), Expect = 3e-12
 Identities = 35/154 (22%), Positives = 59/154 (38%), Gaps = 24/154 (15%)

Query: 405 DNFSEANKLGKGGFGPVYKAKFPG-GQQIAVKRL--SSASGQGLEEFKNEIET-SNSNAT 460
             + +   +G G +G V  A     G ++A+K+L     S    +    E+    +    
Sbjct: 18  AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHE 77

Query: 461 IGANVKAFVREMKTFSDPTLSAL-----------------LHWEMRFNIIIGIARGLLYL 503
               +       +T  D T   L                 L  +    ++  + +GL Y+
Sbjct: 78  NVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYI 137

Query: 504 HQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
           H      IIHRDLK  N+ ++++   KI DFGLA
Sbjct: 138 H---AAGIIHRDLKPGNLAVNEDCELKILDFGLA 168

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.9 bits (160), Expect = 3e-12
 Identities = 30/160 (18%), Positives = 53/160 (33%), Gaps = 35/160 (21%)

Query: 413 LGKGGFGPVYKAKFPG-GQQIAVKRLSSASGQGLEEFKNEIETSNSNATIGANVKAFVRE 471
           LG G  G V +       ++ A+K L         + + E+E  +  A+   ++   V  
Sbjct: 20  LGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVEL-HWRASQCPHIVRIVDV 73

Query: 472 MKTFSDP--------------TLSALLH--------WEMRFNIIIGIARGLLYLHQDSRL 509
            +                    L + +               I+  I   + YLH    +
Sbjct: 74  YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---I 130

Query: 510 RIIHRDLKTSNILLDQEMNP---KISDFGLALDMMDQKLH 546
            I HRD+K  N+L   +      K++DFG A +       
Sbjct: 131 NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL 170

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.7 bits (151), Expect = 4e-11
 Identities = 35/162 (21%), Positives = 57/162 (35%), Gaps = 23/162 (14%)

Query: 405 DNFSEANKLGKGGFGPVYKAKFPG-GQQIAVKRLS--SASGQGLEEFKNEIET-SNSNAT 460
             +     +G G  G V  A      + +A+K+LS    +    +    E+      N  
Sbjct: 17  KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 76

Query: 461 IGANVKAFVREMKTFSDPTLSALLH----------------WEMRFNIIIGIARGLLYLH 504
              ++       KT  +     L+                  E    ++  +  G+ +LH
Sbjct: 77  NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 136

Query: 505 QDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMMDQKLH 546
                 IIHRDLK SNI++  +   KI DFGLA       + 
Sbjct: 137 SA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 175

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 62.4 bits (151), Expect = 4e-11
 Identities = 29/159 (18%), Positives = 54/159 (33%), Gaps = 34/159 (21%)

Query: 404 TDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQGLEE-FKNEIE-------- 453
            D +   + LG G F  V  A+     + +A+K ++  + +G E   +NEI         
Sbjct: 8   RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHP 67

Query: 454 ---------TSNSNATI------GANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIAR 498
                     S  +  +      G  +   + E   ++               +I  +  
Sbjct: 68  NIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYT---------ERDASRLIFQVLD 118

Query: 499 GLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA 537
            + YLH    +    +        LD++    ISDFGL+
Sbjct: 119 AVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS 157

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.8 bits (149), Expect = 6e-11
 Identities = 38/158 (24%), Positives = 59/158 (37%), Gaps = 24/158 (15%)

Query: 404 TDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLS--SASGQGLEEFKNEIE------- 453
            + +   + +G G +G V  A     G ++AVK+LS    S    +    E+        
Sbjct: 17  PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 76

Query: 454 -----------TSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLY 502
                       + S                  ++      L  +    +I  I RGL Y
Sbjct: 77  ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 136

Query: 503 LHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM 540
           +H      IIHRDLK SN+ ++++   KI DFGLA   
Sbjct: 137 IHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT 171

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 61.6 bits (148), Expect = 8e-11
 Identities = 33/178 (18%), Positives = 62/178 (34%), Gaps = 40/178 (22%)

Query: 412 KLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGAN 464
           KLG G F  V+ AK       +A+K +        E  ++EI+       +++       
Sbjct: 20  KLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVY-TEAAEDEIKLLQRVNDADNTKEDSMG 78

Query: 465 VKAFVREMKTFSDPTLSALLHWEMRF------------------------NIIIGIARGL 500
               ++ +  F+    + +    +                           I   +  GL
Sbjct: 79  ANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGL 138

Query: 501 LYLHQDSRLRIIHRDLKTSNILLDQEMNP------KISDFGLALDMMDQKLHASSKPN 552
            Y+H+  R  IIH D+K  N+L++   +P      KI+D G A    +   ++     
Sbjct: 139 DYMHR--RCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTRE 194

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.9 bits (147), Expect = 1e-10
 Identities = 42/161 (26%), Positives = 59/161 (36%), Gaps = 34/161 (21%)

Query: 405 DNFSEANKLGKGGFGPVYKAKFPG-GQQIAVKRL------SSASGQGLEEFKNEIE---- 453
           D +    +LG G F  V K +    G Q A K +      SS  G   E+ + E+     
Sbjct: 10  DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69

Query: 454 -------------TSNSNATIGANVKAFVREMKTFSDPTLSALLHWEMRFNIIIGIARGL 500
                         + ++  +   +   V   + F        L  E     +  I  G+
Sbjct: 70  IQHPNVITLHEVYENKTDVIL---ILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 126

Query: 501 LYLHQDSRLRIIHRDLKTSNILLDQEMNP----KISDFGLA 537
            YLH    L+I H DLK  NI+L     P    KI DFGLA
Sbjct: 127 YYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 164

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	626
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.96
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.96
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.96
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.96
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.95
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.95
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.95
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.95
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.95
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.94
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.94
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.94
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.94
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.94
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.94
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.94
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.94
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.94
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.93
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.93
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.93
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.93
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.93
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.93
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.93
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.93
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.93
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.93
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.93
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.93
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.92
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.92
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.92
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.92
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.91
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.91
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.91
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.91
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.91
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.9
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.9
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.9
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.9
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.9
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.9
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.9
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.9
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.9
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.9
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.9
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.89
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.89
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.89
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.89
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.88
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.88
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.88
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.87
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.86
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.86
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.85
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.82
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.74
d1dlpa2	120	Fetuin-binding protein Scafet precursor {Bluebell	98.72
d1xd5a_	112	Gastrodianin (antifungal protein) {Gastrodia elata	98.68
d1b2pa_	119	Lectin (agglutinin) {Bluebell (Scilla campanulata)	98.32
d1jpca_	108	Lectin (agglutinin) {Snowdrop (Galanthus nivalis)	98.04
d1kj1a_	109	Lectin (agglutinin) {Garlic (Allium sativum) [TaxI	97.97
d1dlpa1	115	Fetuin-binding protein Scafet precursor {Bluebell	97.94
d1dlpa2	120	Fetuin-binding protein Scafet precursor {Bluebell	97.81
d1dlpa1	115	Fetuin-binding protein Scafet precursor {Bluebell	96.95
d1b2pa_	119	Lectin (agglutinin) {Bluebell (Scilla campanulata)	96.86
d1jpca_	108	Lectin (agglutinin) {Snowdrop (Galanthus nivalis)	96.75
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	96.33
d1xd5a_	112	Gastrodianin (antifungal protein) {Gastrodia elata	96.24
d1kj1a_	109	Lectin (agglutinin) {Garlic (Allium sativum) [TaxI	96.21
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	94.86
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	94.85
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	93.96
d1emoa2	39	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	93.67
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	92.61
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	86.48
d1xkba1	39	Factor X, N-terminal module {Human (Homo sapiens)	86.1
d1dx5i2	35	Thrombomodulin, different EGF-like domains {Human	80.85

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.96  E-value=5.2e-31  Score=263.84  Aligned_cols=183  Identities=22%  Similarity=0.338  Sum_probs=143.1

Q ss_pred             HHHhhcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH--HHHH
Q 006915          400 ILAATDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK--AFVR  470 (626)
Q Consensus       400 l~~~~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~  470 (626)
                      ++...++|++.++||+|+||+||+|++. +++.||||+++... ...++|.+|+++      +|++++++.+..  .++.
T Consensus        12 wei~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~i   90 (287)
T d1opja_          12 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI   90 (287)
T ss_dssp             TBCCGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred             cEecHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc-chHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEE
Confidence            3344567888999999999999999985 58899999997543 456678888764      889998887654  3445


Q ss_pred             hhccccCCCcc--------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchh---
Q 006915          471 EMKTFSDPTLS--------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALD---  539 (626)
Q Consensus       471 ~~~~~~~~~l~--------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~---  539 (626)
                      .++++.++++.        ..+++..++.|+.|||.||+|||+++   |+||||||+||||++++.+||+|||+|+.   
T Consensus        91 v~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~---iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~  167 (287)
T d1opja_          91 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTG  167 (287)
T ss_dssp             EEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCCCTTTCCS
T ss_pred             EeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCC---cccCccccCeEEECCCCcEEEccccceeecCC
Confidence            56777766643        34789999999999999999999998   99999999999999999999999999811   


Q ss_pred             ------------------------------------------------------------ccccccCCCCChHHHHHHHH
Q 006915          540 ------------------------------------------------------------MMDQKLHASSKPNEILKCIN  559 (626)
Q Consensus       540 ------------------------------------------------------------~~~~~~~~~~~~~~~~~~~~  559 (626)
                                                                                  .+........+......+.+
T Consensus       168 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~  247 (287)
T d1opja_         168 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYE  247 (287)
T ss_dssp             SSSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHH
T ss_pred             CCceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHHhcCCCCCCCccchHHHHH
Confidence                                                                        01111111222233456788


Q ss_pred             HHHHhcccCCCCCCCHHHHHHHhcccc
Q 006915          560 VGLLCVQEDPNDRPTMSDVVIMLGSEA  586 (626)
Q Consensus       560 ~~~~C~~~~p~~RPs~~~vl~~L~~~~  586 (626)
                      ++..||+.||.+||||.++++.|+.+.
T Consensus       248 li~~cl~~dP~~Rps~~ei~~~L~~~~  274 (287)
T d1opja_         248 LMRACWQWNPSDRPSFAEIHQAFETMF  274 (287)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             HHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence            899999999999999999999998764

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.5e-30  Score=258.53  Aligned_cols=178  Identities=25%  Similarity=0.382  Sum_probs=141.4

Q ss_pred             hcCccccccccccCeEEEEEEEcCCCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH-HHHHhhcccc
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK-AFVREMKTFS  476 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~-~~~~~~~~~~  476 (626)
                      .++|++.+.||+|+||.||+|++++++.||||+++... ...++|.+|++.      +|++++++.+.. .++.+++++.
T Consensus        12 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~iv~Ey~~   90 (272)
T d1qpca_          12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYME   90 (272)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEECCT
T ss_pred             HHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCc-CCHHHHHHHHHHHHhCCCCCEeEEEeeeccCCeEEEEEeCC
Confidence            45788899999999999999999888999999997543 445678888764      889999887654 3345678887


Q ss_pred             CCCccc--------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhc--------
Q 006915          477 DPTLSA--------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM--------  540 (626)
Q Consensus       477 ~~~l~~--------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~--------  540 (626)
                      ++++..        .+++..+++|+.||++||.|||+++   |+||||||+||||++++.+||+|||+|+.+        
T Consensus        91 ~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~---ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~~~  167 (272)
T d1qpca_          91 NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAR  167 (272)
T ss_dssp             TCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECC
T ss_pred             CCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCccchhheeeecccceeeccccceEEccCCccccc
Confidence            777654        3678999999999999999999998   999999999999999999999999998111        


Q ss_pred             ------------------------------------cc-------------------cccCCCCChHHHHHHHHHHHHhc
Q 006915          541 ------------------------------------MD-------------------QKLHASSKPNEILKCINVGLLCV  565 (626)
Q Consensus       541 ------------------------------------~~-------------------~~~~~~~~~~~~~~~~~~~~~C~  565 (626)
                                                          +.                   .......+......+.+++..||
T Consensus       168 ~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl  247 (272)
T d1qpca_         168 EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCW  247 (272)
T ss_dssp             TTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHT
T ss_pred             cccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCcccChHHHHHHHHHHc
Confidence                                                10                   00011111223346788889999


Q ss_pred             ccCCCCCCCHHHHHHHhccc
Q 006915          566 QEDPNDRPTMSDVVIMLGSE  585 (626)
Q Consensus       566 ~~~p~~RPs~~~vl~~L~~~  585 (626)
                      +.||.+||||++++++|+..
T Consensus       248 ~~~P~~Rpt~~ei~~~L~~~  267 (272)
T d1qpca_         248 KERPEDRPTFDYLRSVLEDF  267 (272)
T ss_dssp             CSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCHhHCcCHHHHHHHhhhh
Confidence            99999999999999999764

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=6e-30  Score=255.38  Aligned_cols=187  Identities=22%  Similarity=0.371  Sum_probs=146.7

Q ss_pred             cCccccccccccCeEEEEEEEcCCCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH-HHHHhhccccC
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK-AFVREMKTFSD  477 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~-~~~~~~~~~~~  477 (626)
                      ++|++.+.||+|+||+||+|++++++.||||+++.. ....+.|.+|+..      +|++++++.+.. .++.+++++.+
T Consensus        17 ~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~lv~Ey~~~   95 (285)
T d1fmka3          17 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSK   95 (285)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTT-SSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECCCTT
T ss_pred             HHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECcc-cCCHHHHHHHHHHHHhcccCCEeEEEEEEecCCeEEEEEecCC
Confidence            578999999999999999999988889999999754 3455778888764      888888886644 34456777777


Q ss_pred             CCcc--------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhc---------
Q 006915          478 PTLS--------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM---------  540 (626)
Q Consensus       478 ~~l~--------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~---------  540 (626)
                      +++.        ..++|.+++.|+.||+.||+|||+.+   |+||||||+||||++++.+||+|||+|+.+         
T Consensus        96 g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~---ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~  172 (285)
T d1fmka3          96 GSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ  172 (285)
T ss_dssp             CBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCCTTC-----------
T ss_pred             CchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhh---eecccccceEEEECCCCcEEEcccchhhhccCCCceeec
Confidence            6543        34889999999999999999999998   999999999999999999999999998110         


Q ss_pred             ------------------------------------------------------cccccCCCCChHHHHHHHHHHHHhcc
Q 006915          541 ------------------------------------------------------MDQKLHASSKPNEILKCINVGLLCVQ  566 (626)
Q Consensus       541 ------------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~C~~  566 (626)
                                                                            +........+......+.+++..||+
T Consensus       173 ~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~  252 (285)
T d1fmka3         173 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWR  252 (285)
T ss_dssp             ---CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHHTC
T ss_pred             cccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCcccCHHHHHHHHHHcc
Confidence                                                                  01111112223334567888999999


Q ss_pred             cCCCCCCCHHHHHHHhccccccCCCCCCC
Q 006915          567 EDPNDRPTMSDVVIMLGSEAMNLATPKRP  595 (626)
Q Consensus       567 ~~p~~RPs~~~vl~~L~~~~~~~~~~~~P  595 (626)
                      .||++||+|.+|+.+|+........+..|
T Consensus       253 ~dP~~Rps~~~i~~~L~~~~~~~~p~~~p  281 (285)
T d1fmka3         253 KEPEERPTFEYLQAFLEDYFTSTEPQYQP  281 (285)
T ss_dssp             SSGGGSCCHHHHHHHHHTTTSCSCCCCCC
T ss_pred             cCHhHCcCHHHHHHHHhhhhcCCCCCCCC
Confidence            99999999999999999876555443344

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=3.2e-30  Score=255.03  Aligned_cols=177  Identities=23%  Similarity=0.371  Sum_probs=138.6

Q ss_pred             cCccccccccccCeEEEEEEEcCCCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH--HHHHhhcccc
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK--AFVREMKTFS  476 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~~~  476 (626)
                      ++|++.+.||+|+||.||+|++.+++.||||+++... ...++|.+|++.      +|++++++.+..  .++.+++++.
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~   83 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME   83 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred             HHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCc-CcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecC
Confidence            4788899999999999999999888899999998643 445678777664      899999987754  4445677777


Q ss_pred             CCCccc-------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhc---------
Q 006915          477 DPTLSA-------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM---------  540 (626)
Q Consensus       477 ~~~l~~-------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~---------  540 (626)
                      ++++..       .+++..++.|+.|||.||.|||+.+   |+||||||+|||+++++.+||+|||+|+.+         
T Consensus        84 ~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~---iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~  160 (263)
T d1sm2a_          84 HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST  160 (263)
T ss_dssp             TCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCTTCSGGGEEECGGGCEEECSCC--------------
T ss_pred             CCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhccc---eeecccchhheeecCCCCeEecccchheeccCCCceeec
Confidence            766533       3679999999999999999999998   999999999999999999999999998211         


Q ss_pred             -----------------------------------cc-cc------------------cCCCCChHHHHHHHHHHHHhcc
Q 006915          541 -----------------------------------MD-QK------------------LHASSKPNEILKCINVGLLCVQ  566 (626)
Q Consensus       541 -----------------------------------~~-~~------------------~~~~~~~~~~~~~~~~~~~C~~  566 (626)
                                                         +. ..                  .....+......+.+++..||+
T Consensus       161 ~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~  240 (263)
T d1sm2a_         161 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWK  240 (263)
T ss_dssp             ----CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTC
T ss_pred             ceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHhcCCCCCccccCHHHHHHHHHHcc
Confidence                                               10 00                  0011111223467788899999


Q ss_pred             cCCCCCCCHHHHHHHhccc
Q 006915          567 EDPNDRPTMSDVVIMLGSE  585 (626)
Q Consensus       567 ~~p~~RPs~~~vl~~L~~~  585 (626)
                      .||.+||||+++++.|+.+
T Consensus       241 ~~p~~Rps~~~il~~L~~i  259 (263)
T d1sm2a_         241 ERPEDRPAFSRLLRQLAEI  259 (263)
T ss_dssp             SSGGGSCCHHHHHHHHHHH
T ss_pred             CCHhHCcCHHHHHHHHHHH
Confidence            9999999999999999876

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.95  E-value=1.2e-29  Score=255.45  Aligned_cols=180  Identities=25%  Similarity=0.333  Sum_probs=135.3

Q ss_pred             cCccccccccccCeEEEEEEEcCC-C---cEEEEEEecCC-CcccHHHHHHHHHh------ccccceecchHH--HHHHh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFPG-G---QQIAVKRLSSA-SGQGLEEFKNEIET------SNSNATIGANVK--AFVRE  471 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~~-~---~~vAvK~l~~~-~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~  471 (626)
                      ++|++.+.||+|+||+||+|++.. +   ..||||.+... .....++|.+|+++      +|++++++.+..  .++.+
T Consensus        26 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~iv  105 (299)
T d1jpaa_          26 SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMII  105 (299)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred             hhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEE
Confidence            346677899999999999998743 3   36999998754 33455678888764      889999887654  44456


Q ss_pred             hccccCCCccc-------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchh-----
Q 006915          472 MKTFSDPTLSA-------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALD-----  539 (626)
Q Consensus       472 ~~~~~~~~l~~-------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~-----  539 (626)
                      +|++.++++..       .+++.+++.++.|||+||.|||+.+   |+||||||+||||+.++.+||+|||+|+.     
T Consensus       106 ~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~  182 (299)
T d1jpaa_         106 TEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMN---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDT  182 (299)
T ss_dssp             EECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred             EEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCC---CccCccccceEEECCCCcEEECCcccceEccCCC
Confidence            67777766533       4789999999999999999999998   99999999999999999999999999821     


Q ss_pred             -------------------------------------------ccc-ccc------------------CCCCChHHHHHH
Q 006915          540 -------------------------------------------MMD-QKL------------------HASSKPNEILKC  557 (626)
Q Consensus       540 -------------------------------------------~~~-~~~------------------~~~~~~~~~~~~  557 (626)
                                                                 ++. ...                  ....+......+
T Consensus       183 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l  262 (299)
T d1jpaa_         183 SDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCPSAL  262 (299)
T ss_dssp             -------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTCCHHH
T ss_pred             CcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCccchHHH
Confidence                                                       110 000                  011112233467


Q ss_pred             HHHHHHhcccCCCCCCCHHHHHHHhccccc
Q 006915          558 INVGLLCVQEDPNDRPTMSDVVIMLGSEAM  587 (626)
Q Consensus       558 ~~~~~~C~~~~p~~RPs~~~vl~~L~~~~~  587 (626)
                      .+++..||+.||.+||||.++++.|+.++.
T Consensus       263 ~~li~~cl~~~P~~RPs~~ei~~~L~~~l~  292 (299)
T d1jpaa_         263 HQLMLDCWQKDRNHRPKFGQIVNTLDKMIR  292 (299)
T ss_dssp             HHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence            788899999999999999999999987643

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=5.1e-30  Score=254.97  Aligned_cols=182  Identities=29%  Similarity=0.443  Sum_probs=139.5

Q ss_pred             hcCccccccccccCeEEEEEEEcCCCcEEEEEEecCC--CcccHHHHHHHHHh------ccccceecchHH-HHHHhhcc
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSA--SGQGLEEFKNEIET------SNSNATIGANVK-AFVREMKT  474 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~--~~~~~~~~~~e~~~------~~~~~~~~~~~~-~~~~~~~~  474 (626)
                      .++|++.+.||+|+||+||+|+++  ..||||+++..  .....+.|.+|+++      +|++++.+++.. .++.++++
T Consensus         7 ~~~~~~~~~lG~G~fg~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~~~~~lv~Ey   84 (276)
T d1uwha_           7 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIVTQW   84 (276)
T ss_dssp             TTCCCCCSEEEECSSCEEEEEESS--SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEEC
T ss_pred             cccEEEEEEEeeCCCcEEEEEEEC--CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEeccEEEEEEec
Confidence            467888999999999999999875  36999999743  34456788888765      888888876554 33455676


Q ss_pred             ccCCCccc-------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhc-------
Q 006915          475 FSDPTLSA-------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM-------  540 (626)
Q Consensus       475 ~~~~~l~~-------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~-------  540 (626)
                      +.++++..       .+++..++.|+.|||+||+|||+++   ||||||||+||||+.++.+||+|||+|+..       
T Consensus        85 ~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~---ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~~  161 (276)
T d1uwha_          85 CEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSH  161 (276)
T ss_dssp             CCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTSSEEECCCCCSCC--------
T ss_pred             CCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcCC---EeccccCHHHEEEcCCCCEEEccccceeeccccCCcc
Confidence            66665532       3789999999999999999999997   999999999999999999999999998110       


Q ss_pred             -----------cccc------------------------------cC-----------------------CCCChHHHHH
Q 006915          541 -----------MDQK------------------------------LH-----------------------ASSKPNEILK  556 (626)
Q Consensus       541 -----------~~~~------------------------------~~-----------------------~~~~~~~~~~  556 (626)
                                 +.|+                              .+                       ..........
T Consensus       162 ~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  241 (276)
T d1uwha_         162 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKA  241 (276)
T ss_dssp             ----CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCCGGGSCTTCCHH
T ss_pred             cccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCcchhccccchHH
Confidence                       0000                              00                       0001112245


Q ss_pred             HHHHHHHhcccCCCCCCCHHHHHHHhccccccCC
Q 006915          557 CINVGLLCVQEDPNDRPTMSDVVIMLGSEAMNLA  590 (626)
Q Consensus       557 ~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~~~~~  590 (626)
                      +.+++..||+.||.+||||.+++++|+.+...+|
T Consensus       242 l~~li~~cl~~dp~~RPt~~~il~~Le~l~~~~P  275 (276)
T d1uwha_         242 MKRLMAECLKKKRDERPLFPQILASIELLARSLP  275 (276)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHcCC
Confidence            7788899999999999999999999988755443

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2.7e-29  Score=251.12  Aligned_cols=180  Identities=23%  Similarity=0.356  Sum_probs=134.9

Q ss_pred             cCccccccccccCeEEEEEEEcCCC-----cEEEEEEecCC-CcccHHHHHHHHHh------ccccceecchHH--HHHH
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFPGG-----QQIAVKRLSSA-SGQGLEEFKNEIET------SNSNATIGANVK--AFVR  470 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~~~-----~~vAvK~l~~~-~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~  470 (626)
                      +.|++.++||+|+||+||+|+++..     ..||||+++.. ......+|.+|+++      +|++++.+.+..  .+..
T Consensus         7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~   86 (283)
T d1mqba_           7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI   86 (283)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEE
Confidence            4688889999999999999987532     47999999754 33345578888764      888998887654  2333


Q ss_pred             hhccccCCCc-------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhcc--
Q 006915          471 EMKTFSDPTL-------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMM--  541 (626)
Q Consensus       471 ~~~~~~~~~l-------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~--  541 (626)
                      .++++..+.+       ...+++.+++.++.||+.||+|||+.+   |+||||||+||||+.++.+||+|||+|+.+.  
T Consensus        87 v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~---iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~  163 (283)
T d1mqba_          87 ITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD  163 (283)
T ss_dssp             EEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred             EEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhccccc---cccCccccceEEECCCCeEEEcccchhhcccCC
Confidence            4455544432       235889999999999999999999998   9999999999999999999999999982110  


Q ss_pred             ---------------------------------------------------------------ccccCCCCChHHHHHHH
Q 006915          542 ---------------------------------------------------------------DQKLHASSKPNEILKCI  558 (626)
Q Consensus       542 ---------------------------------------------------------------~~~~~~~~~~~~~~~~~  558 (626)
                                                                                     ........+......+.
T Consensus       164 ~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~  243 (283)
T d1mqba_         164 PEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIY  243 (283)
T ss_dssp             ----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTCBHHHH
T ss_pred             CccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHHHHHHHhccCCCCCchhhHHHHH
Confidence                                                                           00011111222335678


Q ss_pred             HHHHHhcccCCCCCCCHHHHHHHhccccc
Q 006915          559 NVGLLCVQEDPNDRPTMSDVVIMLGSEAM  587 (626)
Q Consensus       559 ~~~~~C~~~~p~~RPs~~~vl~~L~~~~~  587 (626)
                      +++..||+.+|.+||+|.+|+++|+.+..
T Consensus       244 ~li~~cl~~~p~~RPt~~eil~~L~~l~~  272 (283)
T d1mqba_         244 QLMMQCWQQERARRPKFADIVSILDKLIR  272 (283)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHCcCCHhHCcCHHHHHHHHHHHhh
Confidence            88999999999999999999999987643

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=7.1e-29  Score=244.11  Aligned_cols=176  Identities=22%  Similarity=0.324  Sum_probs=138.7

Q ss_pred             cCccccccccccCeEEEEEEEcCCCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH--HHHHhhcccc
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK--AFVREMKTFS  476 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~~~  476 (626)
                      ++|++.++||+|+||+||+|++++++.||||+++... ...++|.+|++.      +|++++++.+..  .++.+++++.
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~-~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~   82 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMA   82 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSS-SCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCT
T ss_pred             HHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCc-CCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccC
Confidence            5788899999999999999999888899999998643 356778888764      889999887654  4445566666


Q ss_pred             CCCcc-------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchh----------
Q 006915          477 DPTLS-------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALD----------  539 (626)
Q Consensus       477 ~~~l~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~----------  539 (626)
                      ++++.       ..+.+..+++++.||++||+|||+.+   |+||||||+|||+++++.+||+|||+++.          
T Consensus        83 ~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~---iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~  159 (258)
T d1k2pa_          83 NGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV  159 (258)
T ss_dssp             TEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT---BCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCCCC
T ss_pred             CCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhcC---cccccccceeEEEcCCCcEEECcchhheeccCCCceeec
Confidence            65542       34778999999999999999999998   99999999999999999999999999811          


Q ss_pred             ----------------------------------ccc-ccc------------------CCCCChHHHHHHHHHHHHhcc
Q 006915          540 ----------------------------------MMD-QKL------------------HASSKPNEILKCINVGLLCVQ  566 (626)
Q Consensus       540 ----------------------------------~~~-~~~------------------~~~~~~~~~~~~~~~~~~C~~  566 (626)
                                                        ++. .+.                  ....+......+.+++..||+
T Consensus       160 ~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~  239 (258)
T d1k2pa_         160 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWH  239 (258)
T ss_dssp             CSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTC
T ss_pred             ccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHHhCCCCCCcccccHHHHHHHHHHcc
Confidence                                              111 010                  011111222457788889999


Q ss_pred             cCCCCCCCHHHHHHHhcc
Q 006915          567 EDPNDRPTMSDVVIMLGS  584 (626)
Q Consensus       567 ~~p~~RPs~~~vl~~L~~  584 (626)
                      .||.+|||+.++++.|..
T Consensus       240 ~dP~~RPt~~eil~~L~d  257 (258)
T d1k2pa_         240 EKADERPTFKILLSNILD  257 (258)
T ss_dssp             SSGGGSCCHHHHHHHHHC
T ss_pred             CCHhHCcCHHHHHHHhhC
Confidence            999999999999999843

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.95  E-value=3.5e-29  Score=252.69  Aligned_cols=184  Identities=26%  Similarity=0.383  Sum_probs=136.3

Q ss_pred             HHHHhhcCccccccccccCeEEEEEEEcC------CCcEEEEEEecCCCc-ccHHHHHHHHHh------ccccceecchH
Q 006915          399 SILAATDNFSEANKLGKGGFGPVYKAKFP------GGQQIAVKRLSSASG-QGLEEFKNEIET------SNSNATIGANV  465 (626)
Q Consensus       399 ~l~~~~~~f~~~~~lG~G~fG~Vy~~~~~------~~~~vAvK~l~~~~~-~~~~~~~~e~~~------~~~~~~~~~~~  465 (626)
                      +++...++|++.+.||+|+||+||+|++.      +++.||||+++.... ...++|.+|++.      +|++.+.+.+.
T Consensus         7 ~~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~   86 (301)
T d1lufa_           7 SLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCA   86 (301)
T ss_dssp             HTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred             hccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeec
Confidence            34446778999999999999999999863      357899999975433 345678888775      67777776543


Q ss_pred             H--HHHHhhccccCCCc------------------------------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEe
Q 006915          466 K--AFVREMKTFSDPTL------------------------------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIH  513 (626)
Q Consensus       466 ~--~~~~~~~~~~~~~l------------------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH  513 (626)
                      .  .+...++++.++++                              ...|++..++.|+.||+.||+|||+.+   |||
T Consensus        87 ~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~---ivH  163 (301)
T d1lufa_          87 VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---FVH  163 (301)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCC
T ss_pred             cCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCC---eEe
Confidence            2  11122233332222                              223788999999999999999999998   999


Q ss_pred             cCCCCCCeEECCCCcEEEEecCcchhc---------------------------------------------cccc----
Q 006915          514 RDLKTSNILLDQEMNPKISDFGLALDM---------------------------------------------MDQK----  544 (626)
Q Consensus       514 rDlkp~NILl~~~~~~kl~DFGla~~~---------------------------------------------~~~~----  544 (626)
                      |||||+||||+.++.+||+|||+|+.+                                             +...    
T Consensus       164 rDlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~  243 (301)
T d1lufa_         164 RDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPY  243 (301)
T ss_dssp             SCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred             eEEcccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCC
Confidence            999999999999999999999998111                                             0000    


Q ss_pred             ---------------cCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhccc
Q 006915          545 ---------------LHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSE  585 (626)
Q Consensus       545 ---------------~~~~~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~  585 (626)
                                     .....+......+.+++..||+.+|.+||||.+|+++|+.+
T Consensus       244 ~~~~~~e~~~~v~~~~~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i  299 (301)
T d1lufa_         244 YGMAHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRM  299 (301)
T ss_dssp             TTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred             CCCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHh
Confidence                           00111223345688899999999999999999999999876

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=5.6e-29  Score=251.07  Aligned_cols=182  Identities=28%  Similarity=0.379  Sum_probs=127.0

Q ss_pred             HhhcCccccccccccCeEEEEEEEcC------CCcEEEEEEecCCC-cccHHHHHHHHHh-------ccccceecchHH-
Q 006915          402 AATDNFSEANKLGKGGFGPVYKAKFP------GGQQIAVKRLSSAS-GQGLEEFKNEIET-------SNSNATIGANVK-  466 (626)
Q Consensus       402 ~~~~~f~~~~~lG~G~fG~Vy~~~~~------~~~~vAvK~l~~~~-~~~~~~~~~e~~~-------~~~~~~~~~~~~-  466 (626)
                      ...++|++.++||+|+||.||+|++.      +++.||||+++... ....+++.+|...       .+++.+.+.+.. 
T Consensus        10 i~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~   89 (299)
T d1ywna1          10 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP   89 (299)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST
T ss_pred             ccHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccC
Confidence            34568999999999999999999863      24689999997533 2334455555432       456666654432 


Q ss_pred             --HHHHhhccccCCCccc----------------------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeE
Q 006915          467 --AFVREMKTFSDPTLSA----------------------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNIL  522 (626)
Q Consensus       467 --~~~~~~~~~~~~~l~~----------------------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIL  522 (626)
                        .++.+++++.++++..                      .|++.+++.++.||++||.|||+++   ||||||||+|||
T Consensus        90 ~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~---ivHrDlKp~NIL  166 (299)
T d1ywna1          90 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNIL  166 (299)
T ss_dssp             TSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEE
T ss_pred             CCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCC---CcCCcCCcccee
Confidence              2334556665555432                      3678999999999999999999998   999999999999


Q ss_pred             ECCCCcEEEEecCcchh---------------------------------------------cccc--------------
Q 006915          523 LDQEMNPKISDFGLALD---------------------------------------------MMDQ--------------  543 (626)
Q Consensus       523 l~~~~~~kl~DFGla~~---------------------------------------------~~~~--------------  543 (626)
                      |++++.+||+|||+|+.                                             ++..              
T Consensus       167 l~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~  246 (299)
T d1ywna1         167 LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF  246 (299)
T ss_dssp             ECGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHH
T ss_pred             ECCCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHHH
Confidence            99999999999999811                                             1100              


Q ss_pred             ------ccCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 006915          544 ------KLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEA  586 (626)
Q Consensus       544 ------~~~~~~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~  586 (626)
                            ......+......+.+++..||+.||.+|||+.+++++|+.++
T Consensus       247 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~il  295 (299)
T d1ywna1         247 CRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL  295 (299)
T ss_dssp             HHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHhcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence                  0001111122346788899999999999999999999998764

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=3.3e-28  Score=248.02  Aligned_cols=178  Identities=25%  Similarity=0.343  Sum_probs=131.5

Q ss_pred             hcCccccccccccCeEEEEEEEcCC------CcEEEEEEecCC-CcccHHHHHHHH-------HhccccceecchHH--H
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFPG------GQQIAVKRLSSA-SGQGLEEFKNEI-------ETSNSNATIGANVK--A  467 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~~------~~~vAvK~l~~~-~~~~~~~~~~e~-------~~~~~~~~~~~~~~--~  467 (626)
                      .++|++.+.||+|+||+||+|++..      ...||||.+... .......|.+|+       .|+|++++++.+..  .
T Consensus        36 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~  115 (325)
T d1rjba_          36 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP  115 (325)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCe
Confidence            4678999999999999999998742      237999998753 223344555553       35888888876543  3


Q ss_pred             HHHhhccccCCCccc-----------------------------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCC
Q 006915          468 FVREMKTFSDPTLSA-----------------------------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKT  518 (626)
Q Consensus       468 ~~~~~~~~~~~~l~~-----------------------------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp  518 (626)
                      ++.+++++.++++..                             .|++..++.|+.||+.||+|||+++   ||||||||
T Consensus       116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~---IiHRDlKp  192 (325)
T d1rjba_         116 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLAA  192 (325)
T ss_dssp             CEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT---EEETTCSG
T ss_pred             EEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCch
Confidence            344566666655432                             3788999999999999999999998   99999999


Q ss_pred             CCeEECCCCcEEEEecCcch---------------------------------------------hccc-ccc-------
Q 006915          519 SNILLDQEMNPKISDFGLAL---------------------------------------------DMMD-QKL-------  545 (626)
Q Consensus       519 ~NILl~~~~~~kl~DFGla~---------------------------------------------~~~~-~~~-------  545 (626)
                      +|||++.++.+||+|||+|+                                             +++. ...       
T Consensus       193 ~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~  272 (325)
T d1rjba_         193 RNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPV  272 (325)
T ss_dssp             GGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred             hccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCH
Confidence            99999999999999999981                                             1111 110       


Q ss_pred             ------------CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcc
Q 006915          546 ------------HASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGS  584 (626)
Q Consensus       546 ------------~~~~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~  584 (626)
                                  ....+......+.+++..||+.||.+||||++|+++|+.
T Consensus       273 ~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~  323 (325)
T d1rjba_         273 DANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGC  323 (325)
T ss_dssp             SHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHhC
Confidence                        111122233567888999999999999999999999964

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=2.9e-28  Score=243.24  Aligned_cols=180  Identities=24%  Similarity=0.309  Sum_probs=137.7

Q ss_pred             hcCccccc-cccccCeEEEEEEEcC---CCcEEEEEEecCCC-cccHHHHHHHHHh------ccccceecchHH-HHHHh
Q 006915          404 TDNFSEAN-KLGKGGFGPVYKAKFP---GGQQIAVKRLSSAS-GQGLEEFKNEIET------SNSNATIGANVK-AFVRE  471 (626)
Q Consensus       404 ~~~f~~~~-~lG~G~fG~Vy~~~~~---~~~~vAvK~l~~~~-~~~~~~~~~e~~~------~~~~~~~~~~~~-~~~~~  471 (626)
                      .++|.+.+ +||+|+||+||+|.++   ++..||||+++... ....++|.+|+++      +|++++++.+.. .++.+
T Consensus         7 ~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~lv   86 (285)
T d1u59a_           7 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLV   86 (285)
T ss_dssp             GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEE
T ss_pred             ccCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeeccCeEEEE
Confidence            34566666 4999999999999764   35589999998543 3445678888764      889998886643 34456


Q ss_pred             hccccCCCccc-------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcch------
Q 006915          472 MKTFSDPTLSA-------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLAL------  538 (626)
Q Consensus       472 ~~~~~~~~l~~-------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~------  538 (626)
                      +|++.++++..       .+++..++.++.|||.||+|||+++   |+||||||+||||+.++.+||+|||+|+      
T Consensus        87 mE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~---iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~  163 (285)
T d1u59a_          87 MEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKALGADD  163 (285)
T ss_dssp             EECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEEETTEEEECCCTTCEECTTCS
T ss_pred             EEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCcCchhheeeccCCceeeccchhhhcccccc
Confidence            77777766533       4789999999999999999999998   9999999999999999999999999981      


Q ss_pred             ----------------------------------------hccc-ccc------------------CCCCChHHHHHHHH
Q 006915          539 ----------------------------------------DMMD-QKL------------------HASSKPNEILKCIN  559 (626)
Q Consensus       539 ----------------------------------------~~~~-~~~------------------~~~~~~~~~~~~~~  559 (626)
                                                              +++. ...                  ....+......+.+
T Consensus       164 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~  243 (285)
T d1u59a_         164 SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYA  243 (285)
T ss_dssp             CEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCCCCTTCCHHHHH
T ss_pred             cccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHH
Confidence                                                    1111 000                  01112223356778


Q ss_pred             HHHHhcccCCCCCCCHHHHHHHhcccc
Q 006915          560 VGLLCVQEDPNDRPTMSDVVIMLGSEA  586 (626)
Q Consensus       560 ~~~~C~~~~p~~RPs~~~vl~~L~~~~  586 (626)
                      ++..||+.+|++||+|.++++.|+...
T Consensus       244 li~~cl~~~p~~RPs~~~i~~~L~~~~  270 (285)
T d1u59a_         244 LMSDCWIYKWEDRPDFLTVEQRMRACY  270 (285)
T ss_dssp             HHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence            899999999999999999999987654

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=7e-28  Score=241.07  Aligned_cols=130  Identities=25%  Similarity=0.402  Sum_probs=109.9

Q ss_pred             cCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH--HHHHhhccc
Q 006915          405 DNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK--AFVREMKTF  475 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~~  475 (626)
                      ++|++.++||+|+||+||+|+. .+|+.||||+++.......+.+.+|+++      +|++++++....  .++.+|+++
T Consensus        20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~   99 (293)
T d1yhwa1          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   99 (293)
T ss_dssp             TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEec
Confidence            4799999999999999999997 4699999999986555566677777664      788888775433  344567878


Q ss_pred             cCCCccc-----CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          476 SDPTLSA-----LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       476 ~~~~l~~-----~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      .++++..     .+++.+...++.||+.||+|||+++   |+||||||+|||++.++.+||+|||+|
T Consensus       100 ~gg~L~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~---iiHrDiKp~NILl~~~~~vkl~DFG~a  163 (293)
T d1yhwa1         100 AGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFC  163 (293)
T ss_dssp             TTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTC
T ss_pred             CCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCC---CcccCCcHHHeEECCCCcEeeccchhh
Confidence            7777643     4788899999999999999999998   999999999999999999999999998

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=5.5e-28  Score=240.42  Aligned_cols=172  Identities=24%  Similarity=0.330  Sum_probs=131.4

Q ss_pred             ccccccCeEEEEEEEcCC---CcEEEEEEecCCC--cccHHHHHHHHHh------ccccceecchHH-HHHHhhccccCC
Q 006915          411 NKLGKGGFGPVYKAKFPG---GQQIAVKRLSSAS--GQGLEEFKNEIET------SNSNATIGANVK-AFVREMKTFSDP  478 (626)
Q Consensus       411 ~~lG~G~fG~Vy~~~~~~---~~~vAvK~l~~~~--~~~~~~~~~e~~~------~~~~~~~~~~~~-~~~~~~~~~~~~  478 (626)
                      ++||+|+||+||+|.+.+   ++.||||+++...  ....++|.+|+++      +|++++++.+.. .++.++|+..++
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~~~~~lvmE~~~~g   92 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELG   92 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESSSEEEEEECCTTE
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEeccCCEEEEEEcCCCC
Confidence            579999999999998643   5689999997532  2335678888764      888888886543 334567777777


Q ss_pred             Cccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcch--------------
Q 006915          479 TLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLAL--------------  538 (626)
Q Consensus       479 ~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~--------------  538 (626)
                      ++..      .+++..++.|+.||+.||+|||+++   |+||||||+||||+.++.+||+|||+|+              
T Consensus        93 ~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~~---iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~  169 (277)
T d1xbba_          93 PLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH  169 (277)
T ss_dssp             EHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC---
T ss_pred             cHHHHHhhccCCCHHHHHHHHHHHHHHHhhHHhCC---cccCCCcchhhcccccCcccccchhhhhhccccccccccccc
Confidence            6643      4789999999999999999999998   9999999999999999999999999981              


Q ss_pred             --------------------------------hccc-ccc------------------CCCCChHHHHHHHHHHHHhccc
Q 006915          539 --------------------------------DMMD-QKL------------------HASSKPNEILKCINVGLLCVQE  567 (626)
Q Consensus       539 --------------------------------~~~~-~~~------------------~~~~~~~~~~~~~~~~~~C~~~  567 (626)
                                                      +++. ...                  ....+......+.+++..||+.
T Consensus       170 ~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~  249 (277)
T d1xbba_         170 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTY  249 (277)
T ss_dssp             -CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCS
T ss_pred             cCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCHHHHHHHHHHcCC
Confidence                                            1111 010                  1111222335677889999999


Q ss_pred             CCCCCCCHHHHHHHhccc
Q 006915          568 DPNDRPTMSDVVIMLGSE  585 (626)
Q Consensus       568 ~p~~RPs~~~vl~~L~~~  585 (626)
                      ||.+||||++|+..|+..
T Consensus       250 dp~~RPs~~~i~~~L~~~  267 (277)
T d1xbba_         250 DVENRPGFAAVELRLRNY  267 (277)
T ss_dssp             STTTSCCHHHHHHHHHHH
T ss_pred             CHhHCcCHHHHHHHhhCH
Confidence            999999999999888654

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=6.7e-28  Score=238.60  Aligned_cols=131  Identities=30%  Similarity=0.349  Sum_probs=105.1

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC-cccHHHHHHHHHh------ccccceecchHH--HHHHhhc
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS-GQGLEEFKNEIET------SNSNATIGANVK--AFVREMK  473 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~  473 (626)
                      .++|++.+.||+|+||+||+|+.. +++.||||++.... ....+.+.+|++.      +|++++.+....  .++.+||
T Consensus         4 ~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmE   83 (271)
T d1nvra_           4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   83 (271)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEe
Confidence            357999999999999999999984 68999999997532 2334556777654      788888775443  3345677


Q ss_pred             cccCCCcccC------CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          474 TFSDPTLSAL------LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       474 ~~~~~~l~~~------l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++.++++...      +++..+..++.||+.||+|||+++   |+||||||+|||+++++.+||+|||+|
T Consensus        84 y~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~~~---IiHrDiKp~NILl~~~~~~KL~DFG~a  150 (271)
T d1nvra_          84 YCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA  150 (271)
T ss_dssp             CCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTC
T ss_pred             ccCCCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcC---CccCcccHHHEEECCCCCEEEccchhh
Confidence            7777766544      678889999999999999999998   999999999999999999999999998

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=3.4e-28  Score=245.94  Aligned_cols=180  Identities=23%  Similarity=0.357  Sum_probs=137.6

Q ss_pred             hcCccccccccccCeEEEEEEEcC------CCcEEEEEEecCC-CcccHHHHHHHHHh------ccccceecchHH--HH
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP------GGQQIAVKRLSSA-SGQGLEEFKNEIET------SNSNATIGANVK--AF  468 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~------~~~~vAvK~l~~~-~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~  468 (626)
                      .++|.+.+.||+|+||+||+|++.      +++.||||+++.. .......|.+|++.      +|++++.+.+..  .+
T Consensus        19 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~   98 (308)
T d1p4oa_          19 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT   98 (308)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSC
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCce
Confidence            367888899999999999999873      2578999999754 33444568888775      788888876543  33


Q ss_pred             HHhhccccCCCcccC----------------CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEE
Q 006915          469 VREMKTFSDPTLSAL----------------LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKIS  532 (626)
Q Consensus       469 ~~~~~~~~~~~l~~~----------------l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~  532 (626)
                      ..+++++.++++..+                +++..++.++.|+|+||.|||+++   |+||||||+||||++++++||+
T Consensus        99 ~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~---ivHrDlk~~NiLld~~~~~Kl~  175 (308)
T d1p4oa_          99 LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIG  175 (308)
T ss_dssp             EEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCSGGGEEECTTCCEEEC
T ss_pred             eEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCC---eeeceEcCCceeecCCceEEEe
Confidence            345666666655432                578889999999999999999997   9999999999999999999999


Q ss_pred             ecCcchhc---------------------------------------------ccc-------------------ccCCC
Q 006915          533 DFGLALDM---------------------------------------------MDQ-------------------KLHAS  548 (626)
Q Consensus       533 DFGla~~~---------------------------------------------~~~-------------------~~~~~  548 (626)
                      |||+|+.+                                             +..                   .....
T Consensus       176 DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~~~~~~~  255 (308)
T d1p4oa_         176 DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLD  255 (308)
T ss_dssp             CTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTCCCC
T ss_pred             ecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCCCCC
Confidence            99998111                                             000                   00011


Q ss_pred             CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 006915          549 SKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEA  586 (626)
Q Consensus       549 ~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~  586 (626)
                      .+......+.+++..||+.+|.+||||.+|+++|+...
T Consensus       256 ~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~  293 (308)
T d1p4oa_         256 KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEM  293 (308)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGS
T ss_pred             CcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence            12223356888899999999999999999999998773

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=9.4e-28  Score=239.84  Aligned_cols=130  Identities=29%  Similarity=0.386  Sum_probs=108.8

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCcccHHHHHHHHH------hccccceecchHH--HHHHhhccc
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQGLEEFKNEIE------TSNSNATIGANVK--AFVREMKTF  475 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~~~~  475 (626)
                      +.|++.+.||+|+||+||+|+.. +++.||||+++.......+.|.+|++      ++|++++.+....  .++.+|+++
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~   91 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC   91 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecC
Confidence            46888999999999999999974 68999999998766556666666665      4888888876543  334567777


Q ss_pred             cCCCcc-------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          476 SDPTLS-------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       476 ~~~~l~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      .++++.       ..|++.++..++.||+.||.|||+++   |+||||||+|||++.++.+||+|||+|
T Consensus        92 ~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~---ivHrDiKp~NIll~~~~~~Kl~DFG~a  157 (288)
T d2jfla1          92 AGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFGVS  157 (288)
T ss_dssp             TTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred             CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EEEeecChhheeECCCCCEEEEechhh
Confidence            776653       34789999999999999999999998   999999999999999999999999998

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=8.7e-28  Score=244.09  Aligned_cols=179  Identities=26%  Similarity=0.409  Sum_probs=133.8

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCc----EEEEEEecCC-CcccHHHHHHHHHh------ccccceecchHHH-HHHh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQ----QIAVKRLSSA-SGQGLEEFKNEIET------SNSNATIGANVKA-FVRE  471 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~----~vAvK~l~~~-~~~~~~~~~~e~~~------~~~~~~~~~~~~~-~~~~  471 (626)
                      .+|++.+.||+|+||+||+|++. +|+    .||||+++.. +....++|.+|++.      +|++++++.+... ....
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~v   88 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLI   88 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEE
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeeEE
Confidence            36899999999999999999874 343    6899998753 34556778888764      8899998876542 2233


Q ss_pred             hccccCCCc-------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchh-----
Q 006915          472 MKTFSDPTL-------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALD-----  539 (626)
Q Consensus       472 ~~~~~~~~l-------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~-----  539 (626)
                      ++++..+++       ...+++..+++++.|||.||+|||+++   ||||||||+||||+.++.+||+|||+|+.     
T Consensus        89 ~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~---iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~  165 (317)
T d1xkka_          89 TQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE  165 (317)
T ss_dssp             EECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTC
T ss_pred             EEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHcC---cccCcchhhcceeCCCCCeEeeccccceeccccc
Confidence            455555543       335789999999999999999999998   99999999999999999999999999811     


Q ss_pred             ----------------------------------------ccc-------------------cccCCCCChHHHHHHHHH
Q 006915          540 ----------------------------------------MMD-------------------QKLHASSKPNEILKCINV  560 (626)
Q Consensus       540 ----------------------------------------~~~-------------------~~~~~~~~~~~~~~~~~~  560 (626)
                                                              ++.                   .......+......+.++
T Consensus       166 ~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~l  245 (317)
T d1xkka_         166 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMI  245 (317)
T ss_dssp             C--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHHTCCCCCCTTBCHHHHHH
T ss_pred             ccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCHHHHHH
Confidence                                                    110                   000111122233567888


Q ss_pred             HHHhcccCCCCCCCHHHHHHHhcccc
Q 006915          561 GLLCVQEDPNDRPTMSDVVIMLGSEA  586 (626)
Q Consensus       561 ~~~C~~~~p~~RPs~~~vl~~L~~~~  586 (626)
                      +..||+.||.+|||+.+++..|..+.
T Consensus       246 i~~cl~~dP~~RPs~~eil~~l~~~~  271 (317)
T d1xkka_         246 MVKCWMIDADSRPKFRELIIEFSKMA  271 (317)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHhCCCChhhCcCHHHHHHHHHHHH
Confidence            89999999999999999999887653

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1e-27  Score=237.21  Aligned_cols=133  Identities=24%  Similarity=0.376  Sum_probs=103.3

Q ss_pred             cCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCC--cccHHHHHHHHHh------ccccceecchHH----HHHHh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSAS--GQGLEEFKNEIET------SNSNATIGANVK----AFVRE  471 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~--~~~~~~~~~e~~~------~~~~~~~~~~~~----~~~~~  471 (626)
                      ++|++.+.||+|+||+||+|+. .+|+.||||.+....  ....+.+.+|+++      +|++++.+....    .++.+
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~iv   83 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV   83 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEE
T ss_pred             hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEE
Confidence            5799999999999999999987 468999999997543  3345667788764      888888876532    23457


Q ss_pred             hccccCCCccc----------CCCHHHHHHHHHHHHHHHHHHHhCC--CCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          472 MKTFSDPTLSA----------LLHWEMRFNIIIGIARGLLYLHQDS--RLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       472 ~~~~~~~~l~~----------~l~~~~~~~i~~~ia~gL~yLH~~~--~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +|++.++++..          .+++..++.++.||+.||.|||+.+  ..+||||||||+||||+.++.+||+|||+|
T Consensus        84 mEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a  161 (269)
T d2java1          84 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA  161 (269)
T ss_dssp             EECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHH
T ss_pred             EecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccce
Confidence            88888777643          4788899999999999999999864  235999999999999999999999999998

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2e-27  Score=234.06  Aligned_cols=176  Identities=22%  Similarity=0.345  Sum_probs=138.2

Q ss_pred             hcCccccccccccCeEEEEEEEcCCCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH---HHHHhhcc
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK---AFVREMKT  474 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~---~~~~~~~~  474 (626)
                      .++|++.+.||+|+||.||+|+++ |+.||||+++..  ...++|.+|++.      +|++++++.+..   .++.++++
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~i~~~--~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey   82 (262)
T d1byga_           6 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY   82 (262)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred             HHHeEEeEEEecCCCeEEEEEEEC-CeEEEEEEECcH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEec
Confidence            356788899999999999999984 788999999753  344678888764      889999987753   35567788


Q ss_pred             ccCCCcccC--------CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcch--------
Q 006915          475 FSDPTLSAL--------LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLAL--------  538 (626)
Q Consensus       475 ~~~~~l~~~--------l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~--------  538 (626)
                      +.++++..+        ++|..+++|+.||+.||.|||+.+   |+||||||+|||++.++.+||+|||+++        
T Consensus        83 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~---ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~~~  159 (262)
T d1byga_          83 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT  159 (262)
T ss_dssp             CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEECCCCC----------
T ss_pred             cCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCc---eeccccchHhheecCCCCEeecccccceecCCCCcc
Confidence            888776544        678899999999999999999987   9999999999999999999999999981        


Q ss_pred             --------------------------------hccc-cc------------------cCCCCChHHHHHHHHHHHHhccc
Q 006915          539 --------------------------------DMMD-QK------------------LHASSKPNEILKCINVGLLCVQE  567 (626)
Q Consensus       539 --------------------------------~~~~-~~------------------~~~~~~~~~~~~~~~~~~~C~~~  567 (626)
                                                      +++. ..                  .....+......+.+++..||+.
T Consensus       160 ~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~  239 (262)
T d1byga_         160 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHL  239 (262)
T ss_dssp             --CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCCCCCTTCCHHHHHHHHHHTCS
T ss_pred             ccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHccc
Confidence                                            1110 00                  11122223335678888999999


Q ss_pred             CCCCCCCHHHHHHHhccc
Q 006915          568 DPNDRPTMSDVVIMLGSE  585 (626)
Q Consensus       568 ~p~~RPs~~~vl~~L~~~  585 (626)
                      ||.+||||.+++++|+.+
T Consensus       240 dP~~Rps~~~l~~~L~~i  257 (262)
T d1byga_         240 DAAMRPSFLQLREQLEHI  257 (262)
T ss_dssp             SGGGSCCHHHHHHHHHHH
T ss_pred             CHhHCcCHHHHHHHHHHH
Confidence            999999999999999765

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.6e-27  Score=236.58  Aligned_cols=177  Identities=25%  Similarity=0.363  Sum_probs=129.2

Q ss_pred             cCccccccccccCeEEEEEEEcC--CC--cEEEEEEecCC---CcccHHHHHHHHHh------ccccceecchHH-HHHH
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP--GG--QQIAVKRLSSA---SGQGLEEFKNEIET------SNSNATIGANVK-AFVR  470 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~--~~--~~vAvK~l~~~---~~~~~~~~~~e~~~------~~~~~~~~~~~~-~~~~  470 (626)
                      ++|++.+.||+|+||+||+|++.  ++  ..||||+++..   .....++|.+|++.      +|++++.+.+.. .+..
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~~~~~l   87 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM   87 (273)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEE
T ss_pred             HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeecchhe
Confidence            46888999999999999999863  22  37999998753   23345678888764      889999887654 2345


Q ss_pred             hhccccCCCcc-------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcch-----
Q 006915          471 EMKTFSDPTLS-------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLAL-----  538 (626)
Q Consensus       471 ~~~~~~~~~l~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~-----  538 (626)
                      +++++..+++.       ..+++..++.++.|||.||.|||+++   |+||||||+||||+.++.+||+|||+++     
T Consensus        88 v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~---iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~~  164 (273)
T d1u46a_          88 VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQN  164 (273)
T ss_dssp             EEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEECCC-
T ss_pred             eeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhCC---EeeeeecHHHhccccccceeeccchhhhhcccC
Confidence            56777666543       34889999999999999999999998   9999999999999999999999999981     


Q ss_pred             -----------------------------------------hccc-cc-------------------cCCCCChHHHHHH
Q 006915          539 -----------------------------------------DMMD-QK-------------------LHASSKPNEILKC  557 (626)
Q Consensus       539 -----------------------------------------~~~~-~~-------------------~~~~~~~~~~~~~  557 (626)
                                                               +++. ..                   .....+......+
T Consensus       165 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~l  244 (273)
T d1u46a_         165 DDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDI  244 (273)
T ss_dssp             CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCCTTCCHHH
T ss_pred             CCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHhCCCCCCCcccccHHH
Confidence                                                     1111 00                   0111122233567


Q ss_pred             HHHHHHhcccCCCCCCCHHHHHHHhcc
Q 006915          558 INVGLLCVQEDPNDRPTMSDVVIMLGS  584 (626)
Q Consensus       558 ~~~~~~C~~~~p~~RPs~~~vl~~L~~  584 (626)
                      .+++..||+.||.+||||.+|+..|..
T Consensus       245 ~~li~~cl~~dp~~RPt~~ei~~~L~~  271 (273)
T d1u46a_         245 YNVMVQCWAHKPEDRPTFVALRDFLLE  271 (273)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence            788999999999999999999998864

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.9e-27  Score=240.95  Aligned_cols=182  Identities=26%  Similarity=0.367  Sum_probs=137.0

Q ss_pred             hcCccccccccccCeEEEEEEEc------CCCcEEEEEEecCCCc-ccHHHHHHHHH-------hccccceecchHH--H
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKF------PGGQQIAVKRLSSASG-QGLEEFKNEIE-------TSNSNATIGANVK--A  467 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~------~~~~~vAvK~l~~~~~-~~~~~~~~e~~-------~~~~~~~~~~~~~--~  467 (626)
                      .++|++.++||+|+||.||+|++      .+++.||||+++.... ....+|.+|+.       |+|++++.+.+..  .
T Consensus        22 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~  101 (311)
T d1t46a_          22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP  101 (311)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             HHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCE
Confidence            46788899999999999999975      2367899999985432 34446666653       5888888887654  2


Q ss_pred             HHHhhccccCCCcc------------------------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEE
Q 006915          468 FVREMKTFSDPTLS------------------------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILL  523 (626)
Q Consensus       468 ~~~~~~~~~~~~l~------------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl  523 (626)
                      ++..++++.++++.                        ..+++..++.++.||+.||+|||+++   ||||||||+|||+
T Consensus       102 ~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~---ivHrDLKp~NIl~  178 (311)
T d1t46a_         102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILL  178 (311)
T ss_dssp             CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEE
T ss_pred             EEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccccccccc
Confidence            33445555544432                        24788999999999999999999998   9999999999999


Q ss_pred             CCCCcEEEEecCcch---------------------------------------------hcc-----------------
Q 006915          524 DQEMNPKISDFGLAL---------------------------------------------DMM-----------------  541 (626)
Q Consensus       524 ~~~~~~kl~DFGla~---------------------------------------------~~~-----------------  541 (626)
                      +.++.+||+|||+++                                             +++                 
T Consensus       179 ~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~  258 (311)
T d1t46a_         179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY  258 (311)
T ss_dssp             ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHH
T ss_pred             cccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence            999999999999981                                             111                 


Q ss_pred             ---ccccCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccccc
Q 006915          542 ---DQKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMN  588 (626)
Q Consensus       542 ---~~~~~~~~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~~~  588 (626)
                         ........+......+.+++..||+.||.+||||.+++++|+..+.+
T Consensus       259 ~~i~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i~~  308 (311)
T d1t46a_         259 KMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE  308 (311)
T ss_dssp             HHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHhcCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhhcc
Confidence               11111111222335678889999999999999999999999876433

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=3.6e-27  Score=232.34  Aligned_cols=173  Identities=24%  Similarity=0.296  Sum_probs=133.4

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCC---CcccHHHHHHHHHh------ccccceecchHH--HHHHhh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSA---SGQGLEEFKNEIET------SNSNATIGANVK--AFVREM  472 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~---~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~  472 (626)
                      ++|++.+.||+|+||+||+|+.. +++.||||++.+.   .....+.+.+|+++      +|++++.+....  .++.++
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivm   85 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL   85 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEE
Confidence            46899999999999999999985 5899999998642   22345667777654      788888776543  344567


Q ss_pred             ccccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhc------
Q 006915          473 KTFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM------  540 (626)
Q Consensus       473 ~~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~------  540 (626)
                      |++.++++.      ..+++.....++.||+.||+|||+++   |+||||||+|||++.++.+||+|||+|...      
T Consensus        86 Ey~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~~---ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~~~~  162 (263)
T d2j4za1          86 EYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT  162 (263)
T ss_dssp             ECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCSCSCCCCCCCE
T ss_pred             eecCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeeeeccccceecCCCCEeecccceeeecCCCccc
Confidence            888777764      34788999999999999999999998   999999999999999999999999998111      


Q ss_pred             -----------------------------------ccccc-----------------CCCCChHHHHHHHHHHHHhcccC
Q 006915          541 -----------------------------------MDQKL-----------------HASSKPNEILKCINVGLLCVQED  568 (626)
Q Consensus       541 -----------------------------------~~~~~-----------------~~~~~~~~~~~~~~~~~~C~~~~  568 (626)
                                                         +....                 ....+......+.++...|++.|
T Consensus       163 ~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~d  242 (263)
T d2j4za1         163 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN  242 (263)
T ss_dssp             ETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCTTSCHHHHHHHHHHTCSS
T ss_pred             ccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCccCCHHHHHHHHHHccCC
Confidence                                               00000                 00111122345777888999999


Q ss_pred             CCCCCCHHHHHH
Q 006915          569 PNDRPTMSDVVI  580 (626)
Q Consensus       569 p~~RPs~~~vl~  580 (626)
                      |.+|||+.|+++
T Consensus       243 p~~R~t~~eil~  254 (263)
T d2j4za1         243 PSQRPMLREVLE  254 (263)
T ss_dssp             GGGSCCHHHHHT
T ss_pred             HhHCcCHHHHHc
Confidence            999999999985

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.3e-27  Score=240.07  Aligned_cols=181  Identities=27%  Similarity=0.425  Sum_probs=135.2

Q ss_pred             cCccccccccccCeEEEEEEEcCC-Cc--EEEEEEecCC-CcccHHHHHHHHHh-------ccccceecchHH--HHHHh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFPG-GQ--QIAVKRLSSA-SGQGLEEFKNEIET-------SNSNATIGANVK--AFVRE  471 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~~-~~--~vAvK~l~~~-~~~~~~~~~~e~~~-------~~~~~~~~~~~~--~~~~~  471 (626)
                      ++|++.++||+|+||+||+|++.+ +.  .||||+++.. .....++|.+|++.       +|++++++.+..  .++.+
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV   89 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA   89 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEE
Confidence            567888999999999999998853 43  5889988643 33455677787653       778888876554  23345


Q ss_pred             hccccCCCcc----------------------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcE
Q 006915          472 MKTFSDPTLS----------------------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNP  529 (626)
Q Consensus       472 ~~~~~~~~l~----------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~  529 (626)
                      ++++.++++.                      ..|++..+++++.|||.||.|||+.+   |+||||||+|||++.++.+
T Consensus        90 ~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~---iiHrDlkp~NIL~~~~~~~  166 (309)
T d1fvra_          90 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVA  166 (309)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCE
T ss_pred             EEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCC---ccccccccceEEEcCCCce
Confidence            5666555543                      34789999999999999999999997   9999999999999999999


Q ss_pred             EEEecCcch------------------------------------------hcc-------------------ccccCCC
Q 006915          530 KISDFGLAL------------------------------------------DMM-------------------DQKLHAS  548 (626)
Q Consensus       530 kl~DFGla~------------------------------------------~~~-------------------~~~~~~~  548 (626)
                      ||+|||+|+                                          +++                   .......
T Consensus       167 kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~~~~~~  246 (309)
T d1fvra_         167 KIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLE  246 (309)
T ss_dssp             EECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCCCC
T ss_pred             EEccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHHHhcCCCC
Confidence            999999980                                          111                   0111111


Q ss_pred             CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccccc
Q 006915          549 SKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEAMN  588 (626)
Q Consensus       549 ~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~~~  588 (626)
                      .+......+.+++..||+.||++||||.++++.|+.+..+
T Consensus       247 ~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~~  286 (309)
T d1fvra_         247 KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE  286 (309)
T ss_dssp             CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             CCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence            2223345688888999999999999999999999988543

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.3e-27  Score=238.93  Aligned_cols=180  Identities=28%  Similarity=0.363  Sum_probs=130.6

Q ss_pred             hcCccccccccccCeEEEEEEEcCC--------CcEEEEEEecCCCc-ccHHHHHHHHH-------hccccceecchHH-
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFPG--------GQQIAVKRLSSASG-QGLEEFKNEIE-------TSNSNATIGANVK-  466 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~~--------~~~vAvK~l~~~~~-~~~~~~~~e~~-------~~~~~~~~~~~~~-  466 (626)
                      .++|.+.+.||+|+||.||+|+...        +..||||+++.... ....++.+|..       ++|++++.+.+.. 
T Consensus        12 ~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~   91 (299)
T d1fgka_          12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD   91 (299)
T ss_dssp             GGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             HHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccC
Confidence            4678889999999999999998632        34799999976433 33455666543       4788888876654 


Q ss_pred             -HHHHhhccccCCCcc----------------------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEE
Q 006915          467 -AFVREMKTFSDPTLS----------------------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILL  523 (626)
Q Consensus       467 -~~~~~~~~~~~~~l~----------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl  523 (626)
                       .++.+++++.++++.                      ..|++.+++.++.||+.||+|||+.+   ||||||||+|||+
T Consensus        92 ~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~---ivHrDiKp~NiLl  168 (299)
T d1fgka_          92 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLV  168 (299)
T ss_dssp             SSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEE
T ss_pred             CeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCC---EEeeeecccceee
Confidence             233445555555442                      34789999999999999999999998   9999999999999


Q ss_pred             CCCCcEEEEecCcch---------------------------------------------hccc----------------
Q 006915          524 DQEMNPKISDFGLAL---------------------------------------------DMMD----------------  542 (626)
Q Consensus       524 ~~~~~~kl~DFGla~---------------------------------------------~~~~----------------  542 (626)
                      +.++.+||+|||+++                                             +++.                
T Consensus       169 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~~~  248 (299)
T d1fgka_         169 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK  248 (299)
T ss_dssp             CTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHH
T ss_pred             cCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHHHHH
Confidence            999999999999981                                             1110                


Q ss_pred             ---cccCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHhcccc
Q 006915          543 ---QKLHASSKPNEILKCINVGLLCVQEDPNDRPTMSDVVIMLGSEA  586 (626)
Q Consensus       543 ---~~~~~~~~~~~~~~~~~~~~~C~~~~p~~RPs~~~vl~~L~~~~  586 (626)
                         .......+......+.+++.+||+.||.+|||+.+|+++|+.++
T Consensus       249 ~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~  295 (299)
T d1fgka_         249 LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV  295 (299)
T ss_dssp             HHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHcCCCCCCCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHh
Confidence               01111112223346788899999999999999999999998763

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=4.6e-27  Score=237.55  Aligned_cols=175  Identities=23%  Similarity=0.319  Sum_probs=134.6

Q ss_pred             cccccccCeEEEEEEEcCC----CcEEEEEEecCC-CcccHHHHHHHHHh------ccccceecchHH---HHHHhhccc
Q 006915          410 ANKLGKGGFGPVYKAKFPG----GQQIAVKRLSSA-SGQGLEEFKNEIET------SNSNATIGANVK---AFVREMKTF  475 (626)
Q Consensus       410 ~~~lG~G~fG~Vy~~~~~~----~~~vAvK~l~~~-~~~~~~~~~~e~~~------~~~~~~~~~~~~---~~~~~~~~~  475 (626)
                      .++||+|+||+||+|++.+    ...||||+++.. .....++|.+|++.      +|++++++.+..   .++.+++++
T Consensus        32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~  111 (311)
T d1r0pa_          32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM  111 (311)
T ss_dssp             EEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECC
T ss_pred             ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEe
Confidence            3689999999999998743    236999999753 44456788888864      889999887653   334567777


Q ss_pred             cCCCccc-------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhc--------
Q 006915          476 SDPTLSA-------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDM--------  540 (626)
Q Consensus       476 ~~~~l~~-------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~--------  540 (626)
                      .++++..       .+.+..++.++.|+|.||.|||+.+   |+||||||+||||++++.+||+|||+++.+        
T Consensus       112 ~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~---iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~  188 (311)
T d1r0pa_         112 KHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV  188 (311)
T ss_dssp             TTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCCT
T ss_pred             ecCchhhhhccccccchHHHHHHHHHHHHHhhhhhcccC---cccCCccHHhEeECCCCCEEEecccchhhccccccccc
Confidence            7766644       2558889999999999999999998   999999999999999999999999998211        


Q ss_pred             ---------------------------------------cccc-------------------cCCCCChHHHHHHHHHHH
Q 006915          541 ---------------------------------------MDQK-------------------LHASSKPNEILKCINVGL  562 (626)
Q Consensus       541 ---------------------------------------~~~~-------------------~~~~~~~~~~~~~~~~~~  562 (626)
                                                             +...                   .....+......+.+++.
T Consensus       189 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~~g~~~~~p~~~~~~l~~li~  268 (311)
T d1r0pa_         189 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML  268 (311)
T ss_dssp             TCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHHTTCCCCCCTTCCHHHHHHHH
T ss_pred             eecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCcccCcHHHHHHHH
Confidence                                                   0000                   000111122346788899


Q ss_pred             HhcccCCCCCCCHHHHHHHhccccc
Q 006915          563 LCVQEDPNDRPTMSDVVIMLGSEAM  587 (626)
Q Consensus       563 ~C~~~~p~~RPs~~~vl~~L~~~~~  587 (626)
                      .||+.||.+||+|.||++.|+.+..
T Consensus       269 ~cl~~dP~~RPs~~ei~~~L~~i~~  293 (311)
T d1r0pa_         269 KCWHPKAEMRPSFSELVSRISAIFS  293 (311)
T ss_dssp             HHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            9999999999999999999988753

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.6e-27  Score=235.42  Aligned_cols=180  Identities=21%  Similarity=0.283  Sum_probs=133.7

Q ss_pred             hcCccccccccccCeEEEEEEEcCC----CcEEEEEEecCCC-cccHHHHHHHHHh------ccccceecchHH-HHHHh
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFPG----GQQIAVKRLSSAS-GQGLEEFKNEIET------SNSNATIGANVK-AFVRE  471 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~~----~~~vAvK~l~~~~-~~~~~~~~~e~~~------~~~~~~~~~~~~-~~~~~  471 (626)
                      .++|++.+.||+|+||.||+|++..    +..||||.++... ....+.|.+|++.      +|++++++.+.. .++.+
T Consensus         6 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~iv   85 (273)
T d1mp8a_           6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWII   85 (273)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSCEEE
T ss_pred             HHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCeEEEE
Confidence            4578999999999999999998743    3579999997543 3345667777664      888888886643 33345


Q ss_pred             hccccCCCcc-------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcch------
Q 006915          472 MKTFSDPTLS-------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLAL------  538 (626)
Q Consensus       472 ~~~~~~~~l~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~------  538 (626)
                      ++++.++++.       ..+++..++.++.||++||.|||+.+   |+||||||+|||++.++.+||+|||+|+      
T Consensus        86 ~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~---iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~  162 (273)
T d1mp8a_          86 MELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST  162 (273)
T ss_dssp             EECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECC-----------
T ss_pred             EEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccC---eeccccchhheeecCCCcEEEccchhheeccCCc
Confidence            6666655543       24789999999999999999999998   9999999999999999999999999981      


Q ss_pred             --------------------------------------hccc-cc------------------cCCCCChHHHHHHHHHH
Q 006915          539 --------------------------------------DMMD-QK------------------LHASSKPNEILKCINVG  561 (626)
Q Consensus       539 --------------------------------------~~~~-~~------------------~~~~~~~~~~~~~~~~~  561 (626)
                                                            +++. ..                  .....+......+.+++
T Consensus       163 ~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li  242 (273)
T d1mp8a_         163 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLM  242 (273)
T ss_dssp             --------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHH
T ss_pred             ceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHH
Confidence                                                  1110 00                  00112223345678888


Q ss_pred             HHhcccCCCCCCCHHHHHHHhcccc
Q 006915          562 LLCVQEDPNDRPTMSDVVIMLGSEA  586 (626)
Q Consensus       562 ~~C~~~~p~~RPs~~~vl~~L~~~~  586 (626)
                      ..||+.||.+|||+.+|++.|..+.
T Consensus       243 ~~cl~~dp~~Rps~~ei~~~L~~i~  267 (273)
T d1mp8a_         243 TKCWAYDPSRRPRFTELKAQLSTIL  267 (273)
T ss_dssp             HHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHcCCCHhHCcCHHHHHHHHHHHH
Confidence            9999999999999999999998764

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.93  E-value=3.5e-27  Score=237.99  Aligned_cols=130  Identities=28%  Similarity=0.418  Sum_probs=105.8

Q ss_pred             cCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCCc---ccHHHHHHHHHh------ccccceecchHH--HHHHhh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASG---QGLEEFKNEIET------SNSNATIGANVK--AFVREM  472 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~---~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~  472 (626)
                      +.|+..+.||+|+||+||+|+. .+++.||||++.....   ...+.+.+|+++      +|++++.+....  .++.++
T Consensus        15 ~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~   94 (309)
T d1u5ra_          15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM   94 (309)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             HhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEE
Confidence            3488899999999999999987 4689999999975432   334567788764      788888876543  333455


Q ss_pred             ccccCCCc------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          473 KTFSDPTL------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       473 ~~~~~~~l------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +++.++.+      ...+++..+..++.||+.||.|||+++   ||||||||+||||++++.+||+|||+|
T Consensus        95 E~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~~---iiHrDiKp~NILl~~~~~~Kl~DFG~a  162 (309)
T d1u5ra_          95 EYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSA  162 (309)
T ss_dssp             ECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTEEEECCCTTC
T ss_pred             EecCCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeccCCCcceEEECCCCCEEEeecccc
Confidence            66555443      235889999999999999999999998   999999999999999999999999998

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=7e-27  Score=231.18  Aligned_cols=129  Identities=28%  Similarity=0.357  Sum_probs=104.1

Q ss_pred             cccccccccCeEEEEEEEcC-CCcEEEEEEecCC--CcccHHHHHHHHHh------ccccceecchHH------HHHHhh
Q 006915          408 SEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSA--SGQGLEEFKNEIET------SNSNATIGANVK------AFVREM  472 (626)
Q Consensus       408 ~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~--~~~~~~~~~~e~~~------~~~~~~~~~~~~------~~~~~~  472 (626)
                      +..++||+|+||+||+|+.. +++.||||++...  .....+.|.+|+++      +|++++.+....      .++.++
T Consensus        12 ~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivm   91 (270)
T d1t4ha_          12 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT   91 (270)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEE
Confidence            55678999999999999875 5889999998753  33345678888765      788888765422      234567


Q ss_pred             ccccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEEC-CCCcEEEEecCcc
Q 006915          473 KTFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLD-QEMNPKISDFGLA  537 (626)
Q Consensus       473 ~~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~-~~~~~kl~DFGla  537 (626)
                      |++.++++..      .+++..+..++.||+.||+|||+++ ++|+||||||+||||+ +++.+||+|||+|
T Consensus        92 E~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~~-~~IiHrDiKp~NILl~~~~~~~Kl~DFGla  162 (270)
T d1t4ha_          92 ELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLA  162 (270)
T ss_dssp             ECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCSCCCGGGEEESSTTSCEEECCTTGG
T ss_pred             eCCCCCcHHHHHhccccccHHHHHHHHHHHHHHHHHHHHCC-CCEEeCCcChhhceeeCCCCCEEEeecCcc
Confidence            8888877644      4678888999999999999999875 5699999999999996 5789999999998

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=7.2e-27  Score=237.69  Aligned_cols=131  Identities=26%  Similarity=0.387  Sum_probs=108.2

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC-cccHHHHHHHHHh------ccccceecchHH--HHHHhhc
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS-GQGLEEFKNEIET------SNSNATIGANVK--AFVREMK  473 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~  473 (626)
                      .++|++.++||+|+||+||+|+.. +|+.||||+++... ......+.+|+.+      +|++++.+.+..  .++.++|
T Consensus         5 ~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmE   84 (322)
T d1s9ja_           5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   84 (322)
T ss_dssp             GGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             ccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence            568999999999999999999974 68999999997543 3345678888765      778887765543  3445677


Q ss_pred             cccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhC-CCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          474 TFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQD-SRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       474 ~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~-~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++.++++..      .+++..+..++.||+.||.|||+. +   |+||||||+||||++++.+||+|||+|
T Consensus        85 y~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~~~---IiHRDiKP~NILl~~~~~vkl~DFGla  152 (322)
T d1s9ja_          85 HMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVS  152 (322)
T ss_dssp             CCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHC---CCCSCCSGGGEEECTTCCEEECCCCCC
T ss_pred             cCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhCC---EEccccCHHHeeECCCCCEEEeeCCCc
Confidence            777776643      478899999999999999999974 6   999999999999999999999999999

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2.1e-26  Score=232.01  Aligned_cols=129  Identities=31%  Similarity=0.420  Sum_probs=103.2

Q ss_pred             cCccccccccccCeEEEEEEEcCCCcEEEEEEecCCCcccHHHHHHHHH--------hccccceecchHH------HHHH
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASGQGLEEFKNEIE--------TSNSNATIGANVK------AFVR  470 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~~e~~--------~~~~~~~~~~~~~------~~~~  470 (626)
                      ..|.+.+.||+|+||.||+|++ +|+.||||+++...   ..++..|.+        |+|++++.+.+..      .++.
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~~---~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~l   78 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL   78 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc---hhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEE
Confidence            3577789999999999999997 57899999997432   233333332        4788888887654      2346


Q ss_pred             hhccccCCCcccC-----CCHHHHHHHHHHHHHHHHHHHhC-----CCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          471 EMKTFSDPTLSAL-----LHWEMRFNIIIGIARGLLYLHQD-----SRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       471 ~~~~~~~~~l~~~-----l~~~~~~~i~~~ia~gL~yLH~~-----~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +++++..+++..+     ++|..+++++.|+|.||+|||+.     ...+||||||||+||||++++.+||+|||++
T Consensus        79 v~Ey~~~g~L~~~l~~~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~  155 (303)
T d1vjya_          79 VSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA  155 (303)
T ss_dssp             EEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred             EEecccCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCcc
Confidence            6788887777543     67999999999999999999974     1245999999999999999999999999988

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.92  E-value=2.6e-26  Score=235.73  Aligned_cols=130  Identities=27%  Similarity=0.325  Sum_probs=108.1

Q ss_pred             cCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH--HHHHhhccc
Q 006915          405 DNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK--AFVREMKTF  475 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~~  475 (626)
                      ++|++.+.||+|+||.||+|+. .+|+.||||+++.........+.+|+++      +|++++++....  .++.+|+++
T Consensus        29 d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~  108 (352)
T d1koba_          29 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL  108 (352)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECC
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence            5799999999999999999987 4699999999986655556677778765      777877765433  344567777


Q ss_pred             cCCCccc-------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEEC--CCCcEEEEecCcc
Q 006915          476 SDPTLSA-------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLD--QEMNPKISDFGLA  537 (626)
Q Consensus       476 ~~~~l~~-------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~--~~~~~kl~DFGla  537 (626)
                      .+++|..       .|++.+...|+.||+.||.|||+++   ||||||||+||||+  .++.+||+|||+|
T Consensus       109 ~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~---iiHRDiKp~NILl~~~~~~~vkL~DFGla  176 (352)
T d1koba_         109 SGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLA  176 (352)
T ss_dssp             CCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSTTCCCEEECCCTTC
T ss_pred             CCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccccccccccccCCCeEEEeecccc
Confidence            7776632       3678999999999999999999998   99999999999998  6789999999998

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.92  E-value=2.9e-26  Score=235.18  Aligned_cols=131  Identities=24%  Similarity=0.354  Sum_probs=108.1

Q ss_pred             hcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH--HHHHhhcc
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK--AFVREMKT  474 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~  474 (626)
                      .++|++.+.||+|+||.||+|+. .+|+.||||++........+.+.+|+.+      +|++++.+....  .++.+|++
T Consensus        25 l~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~  104 (350)
T d1koaa2          25 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF  104 (350)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             ccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            35799999999999999999987 4689999999987655556667777654      778888775433  44456777


Q ss_pred             ccCCCccc-------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECC--CCcEEEEecCcc
Q 006915          475 FSDPTLSA-------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQ--EMNPKISDFGLA  537 (626)
Q Consensus       475 ~~~~~l~~-------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~--~~~~kl~DFGla  537 (626)
                      +.++++..       .+++..+..|+.||+.||.|||+++   ||||||||+|||++.  ++.+||+|||+|
T Consensus       105 ~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~---iiHrDiKp~NIll~~~~~~~vkL~DFG~a  173 (350)
T d1koaa2         105 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLT  173 (350)
T ss_dssp             CCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSTTSCCEEECCCTTC
T ss_pred             CCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcC---CeeeeechhHeeeccCCCCeEEEeecchh
Confidence            77776532       3779999999999999999999998   999999999999954  578999999998

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.92  E-value=4.6e-26  Score=228.00  Aligned_cols=130  Identities=27%  Similarity=0.409  Sum_probs=102.2

Q ss_pred             cCccccccccccCeEEEEEEEcCCCcEEEEEEecCCC--cccHHHHHHHHHh------ccccceecchHH--HHHHhhcc
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSAS--GQGLEEFKNEIET------SNSNATIGANVK--AFVREMKT  474 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~--~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~  474 (626)
                      ++|++.++||+|+||+||+|+.++++.||||+++...  ....+.+.+|+.+      +|++++.+....  .++..+++
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~   81 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEe
Confidence            5799999999999999999999889999999997542  3345778888775      666666654322  11111222


Q ss_pred             ccCC------CcccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          475 FSDP------TLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       475 ~~~~------~l~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ..++      .....|+......++.||+.||+|||+.+   ||||||||+||||+.++.+||+|||+|
T Consensus        82 ~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---IvHrDiKp~NIll~~~~~~kl~DfG~a  147 (286)
T d1ob3a_          82 LDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLA  147 (286)
T ss_dssp             CSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCTTHH
T ss_pred             ehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccCc---EEecCCCCceeeEcCCCCEEecccccc
Confidence            2211      11345889999999999999999999998   999999999999999999999999998

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.91  E-value=1e-25  Score=223.60  Aligned_cols=130  Identities=28%  Similarity=0.361  Sum_probs=106.1

Q ss_pred             cCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCCcc---------cHHHHHHHHH-------hccccceecchHH-
Q 006915          405 DNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQ---------GLEEFKNEIE-------TSNSNATIGANVK-  466 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~~---------~~~~~~~e~~-------~~~~~~~~~~~~~-  466 (626)
                      ++|++.+.||+|+||+||+|+. .+++.||||+++.....         ..+.+.+|+.       ++|++++.+.... 
T Consensus         3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~   82 (277)
T d1phka_           3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN   82 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred             ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccC
Confidence            5799999999999999999987 46899999999753211         1234566654       4778887765443 


Q ss_pred             -HHHHhhccccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          467 -AFVREMKTFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       467 -~~~~~~~~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                       .++.+++++.++++..      .+++.++..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus        83 ~~~~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nill~~~~~~kl~DFG~a  157 (277)
T d1phka_          83 TFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFS  157 (277)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred             cceEEEEEcCCCchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcC---CcccccccceEEEcCCCCeEEccchhe
Confidence             3446677777777643      4789999999999999999999998   999999999999999999999999998

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.4e-25  Score=225.09  Aligned_cols=130  Identities=29%  Similarity=0.364  Sum_probs=106.7

Q ss_pred             cCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCC------cccHHHHHHHHH------hccccceecchHH--HHH
Q 006915          405 DNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSAS------GQGLEEFKNEIE------TSNSNATIGANVK--AFV  469 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~------~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~  469 (626)
                      +.|++.+.||+|+||+||+|+. .+|+.||||++++..      ....+.|.+|++      ++|++++.+....  .++
T Consensus        10 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~   89 (293)
T d1jksa_          10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI   89 (293)
T ss_dssp             GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence            5799999999999999999998 468999999986431      223567777765      4788888875443  344


Q ss_pred             HhhccccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCC----cEEEEecCcc
Q 006915          470 REMKTFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEM----NPKISDFGLA  537 (626)
Q Consensus       470 ~~~~~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~----~~kl~DFGla  537 (626)
                      .++|++.++++..      .+++.....++.||+.||+|||+.+   |+||||||+|||++.++    .+||+|||+|
T Consensus        90 iv~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~~---ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a  164 (293)
T d1jksa_          90 LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA  164 (293)
T ss_dssp             EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred             EEEEcCCCccccchhccccccchhHHHHHHHHHHHHHHhhhhcc---eeecccccceEEEecCCCcccceEecchhhh
Confidence            5677777777643      4788999999999999999999998   99999999999998776    4999999998

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=3.2e-25  Score=223.08  Aligned_cols=130  Identities=25%  Similarity=0.415  Sum_probs=100.9

Q ss_pred             cCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCC--cccHHHHHHHHHh------ccccceecchHH--HHHHhhc
Q 006915          405 DNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSAS--GQGLEEFKNEIET------SNSNATIGANVK--AFVREMK  473 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~--~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~  473 (626)
                      ++|++.++||+|+||+||+|+. .+++.||||+++...  ....+.+.+|+++      +|++++.+....  .++.+++
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e   81 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   81 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence            5899999999999999999997 568999999997432  2345677888765      677777654432  1222333


Q ss_pred             cccCC-------CcccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          474 TFSDP-------TLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       474 ~~~~~-------~l~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +..++       .....+++..+..++.||+.||+|||+.+   ||||||||+|||++.++.+||+|||+|
T Consensus        82 ~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~---IiHrDiKpeNIl~~~~~~~kl~DFG~a  149 (298)
T d1gz8a_          82 FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLA  149 (298)
T ss_dssp             CCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSTTHH
T ss_pred             ecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCC---EEccccCchheeecccCcceeccCCcc
Confidence            33221       12335889999999999999999999998   999999999999999999999999998

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=6e-26  Score=226.50  Aligned_cols=130  Identities=26%  Similarity=0.306  Sum_probs=107.0

Q ss_pred             cCccccccccccCeEEEEEEEc-CCCcEEEEEEecCC---CcccHHHHHHHHH------hccccceecchHH--HHHHhh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSA---SGQGLEEFKNEIE------TSNSNATIGANVK--AFVREM  472 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~---~~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~  472 (626)
                      ++|++.+.||+|+||+||+|+. .+++.||||++...   .....+.+.+|++      ++|++++.+....  .++.+|
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm   87 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL   87 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEE
Confidence            4699999999999999999987 46899999999742   2334566777765      4788887765433  344567


Q ss_pred             ccccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          473 KTFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       473 ~~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      |++.++++..      .+++.....++.|++.||+|||+.+   ||||||||+|||+++++.+||+|||+|
T Consensus        88 Ey~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~~---iiHrDiKp~NIll~~~~~vkl~DFG~a  155 (288)
T d1uu3a_          88 SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTA  155 (288)
T ss_dssp             CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred             EccCCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhcccc---EEcCcCCccccccCCCceEEecccccc
Confidence            7777776643      4788899999999999999999998   999999999999999999999999998

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.91  E-value=1e-25  Score=227.09  Aligned_cols=131  Identities=27%  Similarity=0.318  Sum_probs=99.3

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC-cccHHHHHHHHH------hccccceecchHH--HHHHhhc
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS-GQGLEEFKNEIE------TSNSNATIGANVK--AFVREMK  473 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~-~~~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~~  473 (626)
                      .+.|++.+.||+|+||+||+|+.. +++.||||++.... ......+.+|+.      ++|++++.+....  .++.+||
T Consensus         8 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE   87 (307)
T d1a06a_           8 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQ   87 (307)
T ss_dssp             GGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence            456999999999999999999975 58999999997533 223344556654      4788888765433  3445677


Q ss_pred             cccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEEC---CCCcEEEEecCcc
Q 006915          474 TFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLD---QEMNPKISDFGLA  537 (626)
Q Consensus       474 ~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~---~~~~~kl~DFGla  537 (626)
                      ++.++++..      .+++.....++.||+.||+|||+.+   |+||||||+|||+.   +++.+||+|||+|
T Consensus        88 ~~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~---iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a  157 (307)
T d1a06a_          88 LVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLS  157 (307)
T ss_dssp             CCCSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSTTCCEEECCC---
T ss_pred             ccCCCcHHHhhhcccCCCHHHHHHHHHHHHHHHHhhhhce---eeeEEecccceeecccCCCceEEEecccee
Confidence            777777643      4789999999999999999999998   99999999999994   5789999999998

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.90  E-value=3.7e-25  Score=220.18  Aligned_cols=131  Identities=26%  Similarity=0.323  Sum_probs=106.5

Q ss_pred             hcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCC---cccHHHHHHHHHh------ccccceecchHH------H
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSAS---GQGLEEFKNEIET------SNSNATIGANVK------A  467 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~---~~~~~~~~~e~~~------~~~~~~~~~~~~------~  467 (626)
                      .++|++.+.||+|+||.||+|+. .+++.||||+++...   ......|.+|++.      +|++++.+....      .
T Consensus         6 ~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~   85 (277)
T d1o6ya_           6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL   85 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEE
T ss_pred             cceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCce
Confidence            35799999999999999999987 469999999997543   2334567888764      777777665432      1


Q ss_pred             HHHhhccccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          468 FVREMKTFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       468 ~~~~~~~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++.+|+++.++++.      ..+++.+...++.||+.||+|||+.+   |+||||||+|||++.++..+|+|||++
T Consensus        86 ~~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~---iiHrDiKP~NIll~~~~~~~l~d~~~~  158 (277)
T d1o6ya_          86 PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIA  158 (277)
T ss_dssp             EEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTSCEEECCCTTC
T ss_pred             EEEEEECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCccccCcccccCccccceeehhhhh
Confidence            34567777666553      24789999999999999999999998   999999999999999999999999986

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.90  E-value=7.1e-25  Score=226.11  Aligned_cols=131  Identities=29%  Similarity=0.325  Sum_probs=103.9

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHH---HH------hccccceecchHH--HH
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNE---IE------TSNSNATIGANVK--AF  468 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e---~~------~~~~~~~~~~~~~--~~  468 (626)
                      .++|++.+.||+|+||.||+|+.. +|+.||||++.+..   ......+.+|   +.      ++|++++.+....  .+
T Consensus         3 lddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~   82 (364)
T d1omwa3           3 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL   82 (364)
T ss_dssp             STTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred             HHhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEE
Confidence            367999999999999999999974 69999999986421   1223333333   22      3677777665433  34


Q ss_pred             HHhhccccCCCcccC------CCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          469 VREMKTFSDPTLSAL------LHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       469 ~~~~~~~~~~~l~~~------l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +.+|+++.++++..+      +++.....++.||+.||.|||+.+   ||||||||+||||+.++.+||+|||+|
T Consensus        83 ~ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~---iiHrDlKP~NILl~~~g~iKl~DFGla  154 (364)
T d1omwa3          83 SFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA  154 (364)
T ss_dssp             EEEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECSSSCEEECCCTTC
T ss_pred             EEEEEecCCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHCC---ccceeeccceeEEcCCCcEEEeeecee
Confidence            456788888876543      567888999999999999999998   999999999999999999999999998

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=8.5e-25  Score=221.81  Aligned_cols=130  Identities=22%  Similarity=0.245  Sum_probs=104.6

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCcccHHHHHHHHHh------ccccceecchHH--HHHHhhcc
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQGLEEFKNEIET------SNSNATIGANVK--AFVREMKT  474 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~~  474 (626)
                      .++|++.+.||+|+||+||+|+.. +++.||||.++... .....+.+|+++      +|++++.+....  .++.+||+
T Consensus         4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~-~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~   82 (321)
T d1tkia_           4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF   82 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc-ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEec
Confidence            467999999999999999999874 68899999998643 223456666554      788888764332  44566777


Q ss_pred             ccCCCccc-------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECC--CCcEEEEecCcc
Q 006915          475 FSDPTLSA-------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQ--EMNPKISDFGLA  537 (626)
Q Consensus       475 ~~~~~l~~-------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~--~~~~kl~DFGla  537 (626)
                      +.++++..       .+++.+...|+.||+.||+|||+.+   |+||||||+|||++.  ...+||+|||++
T Consensus        83 ~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~---iiHrDlKp~NIll~~~~~~~ikl~DFG~~  151 (321)
T d1tkia_          83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHN---IGHFDIRPENIIYQTRRSSTIKIIEFGQA  151 (321)
T ss_dssp             CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCTTC
T ss_pred             CCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcC---CCcccccccceeecCCCceEEEEcccchh
Confidence            77766532       4789999999999999999999998   999999999999985  457999999998

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=8.3e-25  Score=222.88  Aligned_cols=131  Identities=27%  Similarity=0.299  Sum_probs=107.8

Q ss_pred             hcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCC---CcccHHHHHHHHHh------ccccceecchHH--HHHHh
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSA---SGQGLEEFKNEIET------SNSNATIGANVK--AFVRE  471 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~---~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~  471 (626)
                      .++|++.+.||+|+||.||+|+. .+++.||||++++.   .....+.+.+|+.+      ++++.+.+....  .++.+
T Consensus         4 l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv   83 (337)
T d1o6la_           4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV   83 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccc
Confidence            45799999999999999999997 46999999999743   23345667777664      777777664433  34456


Q ss_pred             hccccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          472 MKTFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       472 ~~~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++++.++++.      ..++......++.||+.||+|||+++   ||||||||+|||++.++.+||+|||+|
T Consensus        84 ~ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~~---iiHRDlKP~NILl~~~g~vkl~DFG~a  152 (337)
T d1o6la_          84 MEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLC  152 (337)
T ss_dssp             EECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred             eeccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhhcC---ccccccCHHHeEecCCCCEEEeecccc
Confidence            7788777764      34678888899999999999999998   999999999999999999999999999

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.90  E-value=1.7e-24  Score=220.98  Aligned_cols=127  Identities=24%  Similarity=0.366  Sum_probs=101.9

Q ss_pred             cCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCCcccHHHHHHHHH-------hccccceecchH----HHHHHhh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQGLEEFKNEIE-------TSNSNATIGANV----KAFVREM  472 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~~~~~~~~~e~~-------~~~~~~~~~~~~----~~~~~~~  472 (626)
                      ++|++.++||+|+||+||+|+. .+++.||||+++...   .+++.+|++       ++|++++.+...    ..++.++
T Consensus        35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~---~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~  111 (328)
T d3bqca1          35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF  111 (328)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEE
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHH---HHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEE
Confidence            5799999999999999999997 468999999997543   334445543       477777766432    1244567


Q ss_pred             ccccCCCccc---CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCC-cEEEEecCcc
Q 006915          473 KTFSDPTLSA---LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEM-NPKISDFGLA  537 (626)
Q Consensus       473 ~~~~~~~l~~---~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~-~~kl~DFGla  537 (626)
                      +++..+++..   .++......++.||+.||+|||+++   |+||||||+|||++.++ .+||+|||+|
T Consensus       112 e~~~~~~L~~~~~~l~e~~i~~i~~qil~aL~~LH~~g---IvHrDiKp~NILi~~~~~~vkl~DFG~a  177 (328)
T d3bqca1         112 EHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLA  177 (328)
T ss_dssp             ECCCSCBGGGTTTSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCGGGC
T ss_pred             eecCCCcHHHHhcCCCHHHHHHHHHHHHHHHHHHhhcc---cccccccccceEEcCCCCeeeecccccc
Confidence            7777666544   4778899999999999999999998   99999999999998655 6999999998

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.1e-24  Score=219.24  Aligned_cols=125  Identities=31%  Similarity=0.366  Sum_probs=94.6

Q ss_pred             cccccccCeEEEEEEEcC-CCcEEEEEEecCCCcc-----cHHHHHHHHH------hccccceecchHH--HHHHhhccc
Q 006915          410 ANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQ-----GLEEFKNEIE------TSNSNATIGANVK--AFVREMKTF  475 (626)
Q Consensus       410 ~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~-----~~~~~~~e~~------~~~~~~~~~~~~~--~~~~~~~~~  475 (626)
                      +++||+|+||+||+|+.. +|+.||||+++.....     ..+.+.+|++      ++|++++.+....  .++.+++++
T Consensus         3 l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~~   82 (299)
T d1ua2a_           3 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM   82 (299)
T ss_dssp             EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECC
T ss_pred             ceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhhh
Confidence            478999999999999984 5899999999743221     1234566655      4888888765433  233345554


Q ss_pred             cCCCc------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          476 SDPTL------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       476 ~~~~l------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      .++.+      ...+++..+..++.||+.||+|||+++   |+||||||+|||++.++.+||+|||+|
T Consensus        83 ~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~---iiHrDiKp~NIli~~~~~~KL~DFG~a  147 (299)
T d1ua2a_          83 ETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLA  147 (299)
T ss_dssp             SEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCCGGG
T ss_pred             cchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccc---eecccCCcceEEecCCCccccccCccc
Confidence            43322      234778888999999999999999998   999999999999999999999999998

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.90  E-value=8.8e-25  Score=221.07  Aligned_cols=130  Identities=28%  Similarity=0.321  Sum_probs=106.0

Q ss_pred             cCccccccccccCeEEEEEEEc-CCCcEEEEEEecCC---CcccHHHHHHHHHh------ccccceecchHH--HHHHhh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSA---SGQGLEEFKNEIET------SNSNATIGANVK--AFVREM  472 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~---~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~  472 (626)
                      ++|++.+.||+|+||+||+|+. .+|+.||||++++.   .....+.+.+|+.+      +|++++.+....  .++.++
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm   83 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   83 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEe
Confidence            5799999999999999999997 46999999999742   23345667777654      778887765443  344567


Q ss_pred             ccccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          473 KTFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       473 ~~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +++.++++..      .+.+.....++.||+.||+|||+++   |+||||||+||||+.++.+||+|||+|
T Consensus        84 E~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---iiHrDiKp~NILl~~~g~vkL~DFG~a  151 (316)
T d1fota_          84 DYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFA  151 (316)
T ss_dssp             CCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECTTSCEEECCCSSC
T ss_pred             eecCCccccccccccccccccHHHHHHHHHHHhhhhhccCc---EEccccCchheeEcCCCCEEEecCccc
Confidence            7777666533      3677888889999999999999998   999999999999999999999999998

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=2.2e-24  Score=221.52  Aligned_cols=131  Identities=27%  Similarity=0.365  Sum_probs=100.0

Q ss_pred             hcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCC-cccHHHHHHHHHh------ccccceecchHHH------HH
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSAS-GQGLEEFKNEIET------SNSNATIGANVKA------FV  469 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~-~~~~~~~~~e~~~------~~~~~~~~~~~~~------~~  469 (626)
                      +.+|++.++||+|+||+||+|+. .+++.||||+++... ....+.+.+|+++      ++++++.+.+...      .+
T Consensus         7 ~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~   86 (345)
T d1pmea_           7 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV   86 (345)
T ss_dssp             CTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred             CCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceE
Confidence            45799999999999999999986 579999999997543 2334567777664      6666665543221      11


Q ss_pred             HhhccccCCCcc-----cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          470 REMKTFSDPTLS-----ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       470 ~~~~~~~~~~l~-----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ..++++.++++.     ..+++.....++.||+.||+|||+++   ||||||||+||||++++.+||+|||+|
T Consensus        87 ~l~~~~~~g~L~~~l~~~~l~~~~i~~i~~qil~al~yLH~~~---iiHRDIKp~NILl~~~~~~kl~DfG~a  156 (345)
T d1pmea_          87 YLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLA  156 (345)
T ss_dssp             EEEEECCCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred             EEEEeecCCchhhhhhcCCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCcceEEECCCCCEEEcccCce
Confidence            233445555543     34788999999999999999999998   999999999999999999999999998

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.90  E-value=1.1e-24  Score=223.48  Aligned_cols=130  Identities=26%  Similarity=0.291  Sum_probs=104.2

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCC---CcccHHHHHHHHHh------ccccceecchHH--HHHHhh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSA---SGQGLEEFKNEIET------SNSNATIGANVK--AFVREM  472 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~---~~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~  472 (626)
                      ++|++.+.||+|+||.||+|+.. +|+.||||++.+.   .....+.+.+|+.+      +|++++.+....  .++.++
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~  120 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccccccc
Confidence            57999999999999999999874 6999999998642   22345667777665      667776654322  223445


Q ss_pred             ccccCCCcc------cCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          473 KTFSDPTLS------ALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       473 ~~~~~~~l~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +++.++++.      ..+++.....++.||+.||.|||+++   ||||||||+||||+.++.+||+|||+|
T Consensus       121 e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~~---iiHRDIKP~NILl~~~g~ikL~DFG~a  188 (350)
T d1rdqe_         121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFA  188 (350)
T ss_dssp             ECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred             ccccccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCcCCHHHcccCCCCCEEeeeceee
Confidence            566665543      34788899999999999999999998   999999999999999999999999998

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=8.1e-25  Score=225.20  Aligned_cols=129  Identities=24%  Similarity=0.343  Sum_probs=100.7

Q ss_pred             CccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCcc--cHHHHHHHHHhccccceecchHH--------HHHHhhcc
Q 006915          406 NFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASGQ--GLEEFKNEIETSNSNATIGANVK--------AFVREMKT  474 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~--------~~~~~~~~  474 (626)
                      .|+..++||+|+||+||+|+.. +++.||||++......  .+.++.+++.++|++++.+....        .++.++++
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~Ey  100 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDY  100 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSSCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEEEEEC
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccchHHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEEEEec
Confidence            4777899999999999999985 5999999999754432  23345566777888888765432        12234555


Q ss_pred             ccCCC---------cccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCC-cEEEEecCcc
Q 006915          475 FSDPT---------LSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEM-NPKISDFGLA  537 (626)
Q Consensus       475 ~~~~~---------l~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~-~~kl~DFGla  537 (626)
                      +.++.         ....+++..+..++.||+.||+|||+++   |+||||||+||||+.++ .+||+|||++
T Consensus       101 ~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~---IiHrDiKp~NILl~~~~~~~kl~DFG~a  170 (350)
T d1q5ka_         101 VPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSA  170 (350)
T ss_dssp             CSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECTTTCCEEECCCTTC
T ss_pred             cCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcC---CcccCCCcceEEEecCCCceeEecccch
Confidence            54321         1234889999999999999999999998   99999999999999775 8999999998

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=2.7e-24  Score=213.22  Aligned_cols=174  Identities=21%  Similarity=0.301  Sum_probs=123.8

Q ss_pred             cCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCCc------------ccHHHHHHHHH--hccccceecchHH--H
Q 006915          405 DNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASG------------QGLEEFKNEIE--TSNSNATIGANVK--A  467 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~------------~~~~~~~~e~~--~~~~~~~~~~~~~--~  467 (626)
                      ++|++.+.||+|+||.||+|+. .+++.||||+++....            ..+....+.+.  ++|++++.+....  .
T Consensus         4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~   83 (273)
T d1xwsa_           4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS   83 (273)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred             CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCe
Confidence            5799999999999999999987 4689999999864211            11223334443  4778888765433  2


Q ss_pred             HHHhhccccC-CCc------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECC-CCcEEEEecCcchh
Q 006915          468 FVREMKTFSD-PTL------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQ-EMNPKISDFGLALD  539 (626)
Q Consensus       468 ~~~~~~~~~~-~~l------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~-~~~~kl~DFGla~~  539 (626)
                      ++.+++++.+ ..+      ...+++.....++.||+.||+|||+.+   |+||||||+|||++. ++.+||+|||+|..
T Consensus        84 ~~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~~---iiHrDiKp~NIll~~~~~~vkl~DFG~a~~  160 (273)
T d1xwsa_          84 FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGAL  160 (273)
T ss_dssp             EEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred             EEEEEEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---CccccCcccceEEecCCCeEEECcccccee
Confidence            2334444433 222      235789999999999999999999998   999999999999985 47999999999821


Q ss_pred             ccc------------------------------------------cccCC-----------CCChHHHHHHHHHHHHhcc
Q 006915          540 MMD------------------------------------------QKLHA-----------SSKPNEILKCINVGLLCVQ  566 (626)
Q Consensus       540 ~~~------------------------------------------~~~~~-----------~~~~~~~~~~~~~~~~C~~  566 (626)
                      ..+                                          ...+-           ..+......+.+++..|++
T Consensus       161 ~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~i~~~~~~~~~~~s~~~~~li~~~L~  240 (273)
T d1xwsa_         161 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLA  240 (273)
T ss_dssp             CCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHHCCCCCSSCCCHHHHHHHHHHTC
T ss_pred             cccccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCchHHhhcccCCCCCCCHHHHHHHHHHcc
Confidence            111                                          00000           0011112456778889999


Q ss_pred             cCCCCCCCHHHHHHH
Q 006915          567 EDPNDRPTMSDVVIM  581 (626)
Q Consensus       567 ~~p~~RPs~~~vl~~  581 (626)
                      .||.+|||+.|+++.
T Consensus       241 ~dp~~R~s~~eil~h  255 (273)
T d1xwsa_         241 LRPSDRPTFEEIQNH  255 (273)
T ss_dssp             SSGGGSCCHHHHHTS
T ss_pred             CCHhHCcCHHHHhcC
Confidence            999999999999864

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.2e-24  Score=218.22  Aligned_cols=130  Identities=24%  Similarity=0.355  Sum_probs=99.5

Q ss_pred             cCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCC--cccHHHHHHHHHh------ccccceecchHH--HHHHhhc
Q 006915          405 DNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSAS--GQGLEEFKNEIET------SNSNATIGANVK--AFVREMK  473 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~--~~~~~~~~~e~~~------~~~~~~~~~~~~--~~~~~~~  473 (626)
                      ++|++.++||+|+||+||+|+. .+++.||||+++...  ......+.+|+.+      +|++++.+.+..  .+...++
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~   81 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence            5799999999999999999997 568999999997432  2345677888765      566665543322  1111122


Q ss_pred             cccCCC------cccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          474 TFSDPT------LSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       474 ~~~~~~------l~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +..++.      ....+++..+..++.|++.||+|||+++   |+||||||+|||++.++.+||+|||.|
T Consensus        82 ~~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~~---IvHrDiKP~NIli~~~~~~kl~DFG~a  148 (292)
T d1unla_          82 FCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLA  148 (292)
T ss_dssp             CCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTC
T ss_pred             eccccccccccccccccchhHHHHHHHHHHHHHHHhhcCC---EeeecccCcccccccCCceeeeecchh
Confidence            222111      1235678889999999999999999998   999999999999999999999999998

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=5.4e-24  Score=218.80  Aligned_cols=130  Identities=26%  Similarity=0.377  Sum_probs=95.1

Q ss_pred             hcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCC--cccHHHHHHHHHh------ccccceecchHH--------
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSAS--GQGLEEFKNEIET------SNSNATIGANVK--------  466 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~--~~~~~~~~~e~~~------~~~~~~~~~~~~--------  466 (626)
                      .++|++.++||+|+||+||+|+. .+|+.||||+++...  ....+.+.+|+++      +|++++.+....        
T Consensus        17 ~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~   96 (346)
T d1cm8a_          17 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT   96 (346)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             CCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccc
Confidence            46799999999999999999987 469999999997532  2334556666654      677776654321        


Q ss_pred             HHHHhhccccCCCc-----ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          467 AFVREMKTFSDPTL-----SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       467 ~~~~~~~~~~~~~l-----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      .++.+++++ +..+     ...|++..+..++.||+.||.|||+++   |+||||||+|||++.++.+||+|||+|
T Consensus        97 ~~~lv~e~~-~~~l~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---IiHrDiKp~NIL~~~~~~~kl~Dfg~a  168 (346)
T d1cm8a_          97 DFYLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLA  168 (346)
T ss_dssp             CCEEEEECC-SEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred             eEEEEEecc-cccHHHHHHhccccHHHHHHHHHHHHHHHHHHHhCC---CcccccCcchhhcccccccccccccce
Confidence            122333433 2222     235889999999999999999999998   999999999999999999999999998

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=2.3e-24  Score=219.80  Aligned_cols=130  Identities=23%  Similarity=0.308  Sum_probs=100.5

Q ss_pred             hcCccccc-cccccCeEEEEEEEc-CCCcEEEEEEecCCCcccHHHH---HHHHHhccccceecchH------HHHHHhh
Q 006915          404 TDNFSEAN-KLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQGLEEF---KNEIETSNSNATIGANV------KAFVREM  472 (626)
Q Consensus       404 ~~~f~~~~-~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~~~~~~~---~~e~~~~~~~~~~~~~~------~~~~~~~  472 (626)
                      .++|.+.. .||+|+||.||+|+. .+++.||||+++... ...+++   .+...++|++++++...      ..++.++
T Consensus        10 ~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~-~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~ivm   88 (335)
T d2ozaa1          10 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCP-KARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVM   88 (335)
T ss_dssp             GGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECSH-HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred             ccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCcH-HHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEEEEE
Confidence            35788765 599999999999987 568999999997532 122222   22234688888876532      2345667


Q ss_pred             ccccCCCccc--------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECC---CCcEEEEecCcc
Q 006915          473 KTFSDPTLSA--------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQ---EMNPKISDFGLA  537 (626)
Q Consensus       473 ~~~~~~~l~~--------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~---~~~~kl~DFGla  537 (626)
                      +++.+++|..        .|++.+...|+.||+.||+|||+.+   |+||||||+|||+++   ++.+||+|||+|
T Consensus        89 Ey~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~---iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a  161 (335)
T d2ozaa1          89 ECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFA  161 (335)
T ss_dssp             ECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred             ECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcC---Ccccccccccccccccccccccccccccee
Confidence            7777766532        4778899999999999999999998   999999999999985   467999999998

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.6e-24  Score=219.45  Aligned_cols=130  Identities=30%  Similarity=0.379  Sum_probs=105.5

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC---cccHHHHHHH-------HHhccccceecchHH--HHHHh
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS---GQGLEEFKNE-------IETSNSNATIGANVK--AFVRE  471 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~---~~~~~~~~~e-------~~~~~~~~~~~~~~~--~~~~~  471 (626)
                      ++|.+.+.||+|+||+||+|+.. +++.||||++++..   ....+.+..|       +.+++++++.+....  .++.+
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv   81 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV   81 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence            57999999999999999999885 58999999997421   2233333333       345888888775443  34566


Q ss_pred             hccccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          472 MKTFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       472 ~~~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +|++.++++..      .++..+...++.||+.||+|||+++   |+||||||+|||+++++.+||+|||+|
T Consensus        82 mEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~~---iiHrDikp~NiL~~~~~~~kl~DFG~a  150 (320)
T d1xjda_          82 MEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMC  150 (320)
T ss_dssp             EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred             EeecCCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCcccceeecCCCceeccccchh
Confidence            78888777654      3678888999999999999999998   999999999999999999999999998

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=7.4e-24  Score=213.90  Aligned_cols=131  Identities=25%  Similarity=0.395  Sum_probs=97.1

Q ss_pred             hcCccccccccccCeEEEEEEEc-CC-CcEEEEEEecCCC--cccHHHHHHH------H---HhccccceecchHH----
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKF-PG-GQQIAVKRLSSAS--GQGLEEFKNE------I---ETSNSNATIGANVK----  466 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~-~~-~~~vAvK~l~~~~--~~~~~~~~~e------~---~~~~~~~~~~~~~~----  466 (626)
                      .++|++.++||+|+||+||+|+. .+ ++.||||+++...  ......+.+|      +   .++|++++++.+..    
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~   85 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   85 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccc
Confidence            46899999999999999999987 34 6789999986421  1111122222      2   35788888765421    


Q ss_pred             ---HHHHhhccccCCCc-------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCc
Q 006915          467 ---AFVREMKTFSDPTL-------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGL  536 (626)
Q Consensus       467 ---~~~~~~~~~~~~~l-------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGl  536 (626)
                         .++..++++.++.+       ...+++.....++.||+.||+|||+++   ||||||||+|||++.++.+||+|||+
T Consensus        86 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~---ivHrDiKp~NILi~~~~~~kl~dfg~  162 (305)
T d1blxa_          86 RETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGL  162 (305)
T ss_dssp             SEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECSCCS
T ss_pred             cCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---EEecCCCccEEEEcCCCCeeecchhh
Confidence               12233344333221       234778888999999999999999998   99999999999999999999999999


Q ss_pred             c
Q 006915          537 A  537 (626)
Q Consensus       537 a  537 (626)
                      +
T Consensus       163 ~  163 (305)
T d1blxa_         163 A  163 (305)
T ss_dssp             C
T ss_pred             h
Confidence            8

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=2.3e-23  Score=211.49  Aligned_cols=131  Identities=25%  Similarity=0.398  Sum_probs=97.8

Q ss_pred             hcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCC--CcccHHHHHHHHH------hccccceecchHHH-------
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSA--SGQGLEEFKNEIE------TSNSNATIGANVKA-------  467 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~--~~~~~~~~~~e~~------~~~~~~~~~~~~~~-------  467 (626)
                      .++|++.++||+|+||+||+|+. .+|+.||||++...  .......+.+|++      ++|++.+.+.....       
T Consensus         9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~   88 (318)
T d3blha1           9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   88 (318)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC--------
T ss_pred             cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccccc
Confidence            36899999999999999999997 46999999998643  2233455666655      36777766543221       


Q ss_pred             ---HHHhhccccCCC------cccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          468 ---FVREMKTFSDPT------LSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       468 ---~~~~~~~~~~~~------l~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                         ++..++++..+.      ....+.......++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus        89 ~~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~~---ivHrDlKp~NILl~~~~~~kl~dfg~~  164 (318)
T d3blha1          89 KGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLA  164 (318)
T ss_dssp             --CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTC
T ss_pred             CceEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhccCC---EEecCcCchheeecCCCcEEeeeccee
Confidence               112233333222      1234667888899999999999999998   999999999999999999999999998

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.88  E-value=9.2e-24  Score=212.51  Aligned_cols=128  Identities=25%  Similarity=0.361  Sum_probs=92.6

Q ss_pred             cCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCCcccHHHHHHHHH------hccccceecchHH---HHHHhhcc
Q 006915          405 DNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQGLEEFKNEIE------TSNSNATIGANVK---AFVREMKT  474 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~~~~~~~~~e~~------~~~~~~~~~~~~~---~~~~~~~~  474 (626)
                      ++|++.+.||+|+||.||+|++ .+++.||||.+......  .++..|++      +.+.+..+..+..   .++.++++
T Consensus         7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~--~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~   84 (299)
T d1ckia_           7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL   84 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTTS--CCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred             CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhccC--HHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEE
Confidence            5699999999999999999987 46899999998754322  22344443      3444433332211   12223333


Q ss_pred             ccCCCc-------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEEC---CCCcEEEEecCcch
Q 006915          475 FSDPTL-------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLD---QEMNPKISDFGLAL  538 (626)
Q Consensus       475 ~~~~~l-------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~---~~~~~kl~DFGla~  538 (626)
                      . ++.+       ...+++..++.++.|++.||+|||+++   ||||||||+|||++   .+..+||+|||+|+
T Consensus        85 ~-~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~  154 (299)
T d1ckia_          85 L-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK  154 (299)
T ss_dssp             C-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECCGGGTTCEEECCCSSCE
T ss_pred             c-CCchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHhhccccccCCCceeeeeccCcce
Confidence            3 2222       235789999999999999999999998   99999999999985   45679999999983

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=2.2e-23  Score=214.46  Aligned_cols=131  Identities=30%  Similarity=0.389  Sum_probs=99.8

Q ss_pred             hcCccccccccccCeEEEEEEEc-CCCcEEEEEEecCCC--cccHHHHHHHHHh------ccccceecchHH-------H
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSAS--GQGLEEFKNEIET------SNSNATIGANVK-------A  467 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~--~~~~~~~~~e~~~------~~~~~~~~~~~~-------~  467 (626)
                      .++|++.++||+|+||+||+|+. .+|+.||||+++...  ....+.+.+|+++      ++++++.+....       .
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~   96 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN   96 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCC
T ss_pred             CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCc
Confidence            46799999999999999999986 569999999997542  2334566677664      566665543211       1


Q ss_pred             HHHhhccccCCCccc-----CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          468 FVREMKTFSDPTLSA-----LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       468 ~~~~~~~~~~~~l~~-----~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      .+..++++.++++..     .+++.....++.||+.||+|||+++   |+||||||+|||++.++.+|++|||++
T Consensus        97 ~~~i~~~~~gg~L~~~~~~~~l~e~~~~~i~~qil~aL~~LH~~g---iiHrDiKp~NILi~~~~~~kl~dfg~a  168 (348)
T d2gfsa1          97 DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA  168 (348)
T ss_dssp             CCEEEEECCSEEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCC---
T ss_pred             eEEEEEeecCCchhhhcccccccHHHHHHHHHHHHHHHHHHHhCC---CcccccCCccccccccccccccccchh
Confidence            123345555555533     4788999999999999999999998   999999999999999999999999998

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=7.1e-23  Score=210.95  Aligned_cols=130  Identities=26%  Similarity=0.322  Sum_probs=99.2

Q ss_pred             cCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCC--cccHHHHHHHHHh------ccccceecchHH--------H
Q 006915          405 DNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSAS--GQGLEEFKNEIET------SNSNATIGANVK--------A  467 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~--~~~~~~~~~e~~~------~~~~~~~~~~~~--------~  467 (626)
                      ++|++.++||+|+||+||+|++. +|+.||||+++...  ......+.+|+.+      ++++++.+....        .
T Consensus        17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~   96 (355)
T d2b1pa1          17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD   96 (355)
T ss_dssp             TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred             CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCce
Confidence            67999999999999999999975 69999999997532  2334456666654      667776654321        2


Q ss_pred             HHHhhccccCCC---cccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          468 FVREMKTFSDPT---LSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       468 ~~~~~~~~~~~~---l~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++.+++++.++.   ....+++.....++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||++
T Consensus        97 ~~iv~Ey~~~~l~~~~~~~~~~~~i~~~~~qil~gl~~LH~~g---iiHrDlKP~Nil~~~~~~~kl~df~~~  166 (355)
T d2b1pa1          97 VYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA  166 (355)
T ss_dssp             EEEEEECCSEEHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCCCC-
T ss_pred             eEEEEeccchHHHHhhhcCCCHHHHHHHHHHHHHHHHHhhhcc---cccccCCccccccccccceeeechhhh
Confidence            234455544322   2345788999999999999999999998   999999999999999999999999987

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=1.5e-22  Score=205.26  Aligned_cols=130  Identities=25%  Similarity=0.266  Sum_probs=100.4

Q ss_pred             cCccccccccccCeEEEEEEEc----CCCcEEEEEEecCCC----cc------cHHHHHHHHHh-ccccceecchHH--H
Q 006915          405 DNFSEANKLGKGGFGPVYKAKF----PGGQQIAVKRLSSAS----GQ------GLEEFKNEIET-SNSNATIGANVK--A  467 (626)
Q Consensus       405 ~~f~~~~~lG~G~fG~Vy~~~~----~~~~~vAvK~l~~~~----~~------~~~~~~~e~~~-~~~~~~~~~~~~--~  467 (626)
                      ++|++.+.||+|+||+||+|+.    .+|+.||||.++...    ..      .+.+....+.+ ++++++......  .
T Consensus        24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~  103 (322)
T d1vzoa_          24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  103 (322)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCc
Confidence            5699999999999999999975    248899999986421    11      23344455555 577777654332  3


Q ss_pred             HHHhhccccCCCccc------CCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          468 FVREMKTFSDPTLSA------LLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       468 ~~~~~~~~~~~~l~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ++..++++.++++..      .+.......++.||+.||+|||+.+   |+||||||+||||+.++.+||+|||+|
T Consensus       104 ~~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~~---ivHrDiKp~Nill~~~~~vkL~DFG~a  176 (322)
T d1vzoa_         104 LHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLS  176 (322)
T ss_dssp             EEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEESCSSEE
T ss_pred             eeeeeecccccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhhcCC---EEeccCCccceeecCCCCEEEeeccch
Confidence            334566666666543      3556777889999999999999998   999999999999999999999999998

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.85  E-value=2.4e-22  Score=201.12  Aligned_cols=130  Identities=18%  Similarity=0.258  Sum_probs=92.5

Q ss_pred             hcCccccccccccCeEEEEEEEcC-CCcEEEEEEecCCCc-ccHHHHHHHHHh----ccccceecchHH--HHHHhhccc
Q 006915          404 TDNFSEANKLGKGGFGPVYKAKFP-GGQQIAVKRLSSASG-QGLEEFKNEIET----SNSNATIGANVK--AFVREMKTF  475 (626)
Q Consensus       404 ~~~f~~~~~lG~G~fG~Vy~~~~~-~~~~vAvK~l~~~~~-~~~~~~~~e~~~----~~~~~~~~~~~~--~~~~~~~~~  475 (626)
                      .++|++.+.||+|+||+||+|+.. +++.||||.+..... ....+..+++..    .+++.+......  .++.++++.
T Consensus         4 g~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~~   83 (293)
T d1csna_           4 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL   83 (293)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC
T ss_pred             CCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccCcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEec
Confidence            367999999999999999999974 689999999864322 222222233222    344444332211  112223332


Q ss_pred             cCCCc-------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECC-----CCcEEEEecCcc
Q 006915          476 SDPTL-------SALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQ-----EMNPKISDFGLA  537 (626)
Q Consensus       476 ~~~~l-------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~-----~~~~kl~DFGla  537 (626)
                       ++++       ...+++.....++.|++.||+|||+.+   |+||||||+|||++.     ++.+||+|||+|
T Consensus        84 -~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~g---iiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a  153 (293)
T d1csna_          84 -GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKS---LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMV  153 (293)
T ss_dssp             -CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECCSSSTTTTCEEECCCTTC
T ss_pred             -CCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCC---ceeccCCccceeecCcccccCCceEEccccee
Confidence             3332       234788899999999999999999998   999999999999974     578999999998

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.82  E-value=5e-21  Score=197.76  Aligned_cols=128  Identities=24%  Similarity=0.227  Sum_probs=87.9

Q ss_pred             CccccccccccCeEEEEEEEc-CCCcEEEEEEecCCCcccHHHHHHHHH------h-----------ccccceecchHH-
Q 006915          406 NFSEANKLGKGGFGPVYKAKF-PGGQQIAVKRLSSASGQGLEEFKNEIE------T-----------SNSNATIGANVK-  466 (626)
Q Consensus       406 ~f~~~~~lG~G~fG~Vy~~~~-~~~~~vAvK~l~~~~~~~~~~~~~e~~------~-----------~~~~~~~~~~~~-  466 (626)
                      +|++.++||+|+||+||+|+. .+|+.||||+++.... ..+.+.+|+.      +           .+++.++..... 
T Consensus        14 rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~-~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~   92 (362)
T d1q8ya_          14 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKV-YTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK   92 (362)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHH-HHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred             cEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEecccc-chHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeec
Confidence            499999999999999999987 5699999999985422 2233344433      2           333333322110 


Q ss_pred             ---HHHHhhcccc---------CCCcccCCCHHHHHHHHHHHHHHHHHHHh-CCCCceEecCCCCCCeEECCCCc-----
Q 006915          467 ---AFVREMKTFS---------DPTLSALLHWEMRFNIIIGIARGLLYLHQ-DSRLRIIHRDLKTSNILLDQEMN-----  528 (626)
Q Consensus       467 ---~~~~~~~~~~---------~~~l~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivHrDlkp~NILl~~~~~-----  528 (626)
                         .....+....         .......+.......++.||+.||+|||+ .+   |+||||||+||||+.++.     
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~---IvHrDlKp~NIll~~~~~~~~~~  169 (362)
T d1q8ya_          93 GPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG---IIHTDIKPENVLMEIVDSPENLI  169 (362)
T ss_dssp             ETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECSCCSGGGEEEEEEETTTTEE
T ss_pred             cccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcC---cccccCChhHeeeeccCcccccc
Confidence               0000111111         01123346778888999999999999998 66   999999999999986653     


Q ss_pred             -EEEEecCcc
Q 006915          529 -PKISDFGLA  537 (626)
Q Consensus       529 -~kl~DFGla  537 (626)
                       +||+|||.|
T Consensus       170 ~~kl~dfg~s  179 (362)
T d1q8ya_         170 QIKIADLGNA  179 (362)
T ss_dssp             EEEECCCTTC
T ss_pred             eeeEeecccc
Confidence             999999998

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.74  E-value=3e-19  Score=166.63  Aligned_cols=127  Identities=18%  Similarity=0.171  Sum_probs=83.4

Q ss_pred             cccccccccCeEEEEEEEcCCCcEEEEEEecCCCc-----cc-------------HHHHHHHHHhccccceecchHH---
Q 006915          408 SEANKLGKGGFGPVYKAKFPGGQQIAVKRLSSASG-----QG-------------LEEFKNEIETSNSNATIGANVK---  466 (626)
Q Consensus       408 ~~~~~lG~G~fG~Vy~~~~~~~~~vAvK~l~~~~~-----~~-------------~~~~~~e~~~~~~~~~~~~~~~---  466 (626)
                      .+.++||+|+||+||+|+..+|+.||||.++....     ..             ......|..  ++.++.+.++.   
T Consensus         3 ~vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~--~l~~l~~~~v~~~~   80 (191)
T d1zara2           3 AIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFR--ALQKLQGLAVPKVY   80 (191)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHH--HHHHTTTSSSCCEE
T ss_pred             hhCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHH--HHHHccCCCcceEE
Confidence            45689999999999999988899999998763210     00             011112221  11111111111   


Q ss_pred             ---HHHHhhccccCCCcccCCCHHHHHHHHHHHHHHHHHHHhCCCCceEecCCCCCCeEECCCCcEEEEecCcchhcc
Q 006915          467 ---AFVREMKTFSDPTLSALLHWEMRFNIIIGIARGLLYLHQDSRLRIIHRDLKTSNILLDQEMNPKISDFGLALDMM  541 (626)
Q Consensus       467 ---~~~~~~~~~~~~~l~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~kl~DFGla~~~~  541 (626)
                         ..+..+++...... ..+.......++.|++.+|.|||+.+   |+||||||+|||++++ .++|+|||+|....
T Consensus        81 ~~~~~~lvme~~~~~~~-~~l~~~~~~~i~~ql~~~l~~lH~~g---iiHrDiKP~NILv~~~-~~~liDFG~a~~~~  153 (191)
T d1zara2          81 AWEGNAVLMELIDAKEL-YRVRVENPDEVLDMILEEVAKFYHRG---IVHGDLSQYNVLVSEE-GIWIIDFPQSVEVG  153 (191)
T ss_dssp             EEETTEEEEECCCCEEG-GGCCCSCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEEETT-EEEECCCTTCEETT
T ss_pred             EecCCEEEEEeeccccc-cchhhHHHHHHHHHHHHHHHHHhhCC---EEEccCChhheeeeCC-CEEEEECCCcccCC
Confidence               11122343333332 33555666789999999999999998   9999999999999865 58999999995543

>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=98.72  E-value=7.2e-09  Score=86.57  Aligned_cols=107  Identities=11%  Similarity=0.102  Sum_probs=66.1

Q ss_pred             ccEEEEeCCCCceEE--eeCCCCCcccccCccccCcceEEEccCCCCCCCccEEEEEc-CCCceeEEecCCeeEEeeCCc
Q 006915            4 GNFVLQDDQVRKNLW--ESFKYPTDTFLAGMYMGENLSLTSWAGHDDPKPGNFTFKMD-QGENQYQITKPLIRHWRSAES   80 (626)
Q Consensus         4 GNlvl~~~~~~~~lW--qSFd~PtDTllpgq~l~~~~~L~S~~s~~d~s~G~~~l~~~-~~~~~~~~~~~~~~yw~~~~~   80 (626)
                      ||+|+++++ +.++|  +|++.|++||.++|.|.               .|.|+|.|+ +|+..+  +.+...+|.+...
T Consensus         1 g~~v~~~~~-n~il~~~~~~~~~~~~l~~~q~l~---------------~g~y~L~~q~DGNLvL--~~~~~~vW~s~t~   62 (120)
T d1dlpa2           1 GSVVVANNG-NSILYSTQGNDNHPQTLHATQSLQ---------------LSPYRLSMETDCNLVL--FDRDDRVWSTNTA   62 (120)
T ss_dssp             SCCCCSSCC-CEECCCC--CCCCCCEECSSCCCB---------------CSSCEEEEETTTEEEE--EBTTBCCSCCCCC
T ss_pred             CcEEEEeCC-CeEEEcCCCCCCcccEEcCCCeeE---------------cCCEEEEEcCCCcEEE--ecCCcEEEEEccc
Confidence            788888866 57777  88999999999999986               367999999 777754  4566788877533


Q ss_pred             CCccccccccccceece--eeeeeeeecCCCCce-eEEEEEecCCCceeEEEEEeecccEEEE
Q 006915           81 KDVFSSNEIIPYQILNL--LSNFSHSVKPTGKNA-VHPNLIVPSIDYSRTRLIMNYTGEIQYW  140 (626)
Q Consensus        81 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~rl~l~~dG~l~~~  140 (626)
                      ...       ......+  ...+...+.   .+. .+.+.+..  ....++++|++||++++|
T Consensus        63 ~~~-------~~~~~~l~~~GnLvl~d~---~~~~lW~S~t~~--~~~~~~l~Lq~DGnlvlY  113 (120)
T d1dlpa2          63 GKG-------TGCRAVLQPNGRMDVLTN---QNIAVWTSGNSR--SAGRYVFVLQPDRNLAIY  113 (120)
T ss_dssp             SSC-------SSCEEEEETTTEEEEEET---TTEEEEECCCCC--SSSCCEEEECSSSCEEEE
T ss_pred             cCC-------CcEEEEEeCCeeEEEEcC---CCCEEEEeCCCC--CCCcEEEEECCCCcEEEe
Confidence            211       0111111  122222222   222 23222221  223458999999999999

>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Gastrodianin (antifungal protein)
species: Gastrodia elata [TaxId: 91201]

Probab=98.68  E-value=5.9e-08  Score=80.15  Aligned_cols=111  Identities=14%  Similarity=0.155  Sum_probs=66.9

Q ss_pred             CcccccCccccCcceEEEccCCCCCCCccEEEEEc-CCCceeEEecCCeeEEeeCCcCCccccccccccceeceeeeeee
Q 006915           25 TDTFLAGMYMGENLSLTSWAGHDDPKPGNFTFKMD-QGENQYQITKPLIRHWRSAESKDVFSSNEIIPYQILNLLSNFSH  103 (626)
Q Consensus        25 tDTllpgq~l~~~~~L~S~~s~~d~s~G~~~l~~~-~~~~~~~~~~~~~~yw~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (626)
                      ||||+|||.|..++.|+|         |.|+|.|+ +|+..+  +.+..++|.++.....  ++   ..........+..
T Consensus         1 tDtL~~gq~L~~g~~l~~---------g~~~l~~q~DGNLvl--y~~~~~vW~s~~~~~~--~~---~~l~l~~dGnLvl   64 (112)
T d1xd5a_           1 SDRLNSGHQLDTGGSLAE---------GGYLFIIQNDCNLVL--YDNNRAVWASGTNGKA--SG---CVLKMQNDGNLVI   64 (112)
T ss_dssp             CCEEETTEEECTTCEEEE---------TTEEEEECTTSCEEE--EETTEEEEECCCTTSC--SS---EEEEECTTSCEEE
T ss_pred             CCEecCCCEecCCCEEEE---------CCEEEEEcCCCCEEE--EcCCcEEEEccCccCC--CC---cEEEEeccccEEE
Confidence            899999999999999975         99999999 777554  4567889987654421  00   0000000111111


Q ss_pred             eecCCCCceeEEEEEecCCCceeEEEEEeecccEEEEEecCCCCeEEEEeccCCCCC
Q 006915          104 SVKPTGKNAVHPNLIVPSIDYSRTRLIMNYTGEIQYWTEDKVKGWSLIWREPRDNCS  160 (626)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~rl~l~~dG~l~~~~~~~~~~W~~~~~~p~~~C~  160 (626)
                      ...   ....+.+ .... .....+++|..||+|++|..  .  ..++|+...+.|.
T Consensus        65 ~~~---~~~~w~s-~t~~-~~~~~~l~L~ddGNlvly~~--~--~~~~W~S~t~~~n  112 (112)
T d1xd5a_          65 YSG---SRAIWAS-NTNR-QNGNYYLILQRDRNVVIYDN--S--NNAIWATHTNVGN  112 (112)
T ss_dssp             EET---TEEEEEC-CCCC-SCCCCEEEECTTSCEEEECT--T--SCEEEECCCCCCC
T ss_pred             Eec---CCeEEEE-eecc-CCCceEEEEcCCCCEEEECC--C--CcEEecCCCccCC
Confidence            111   2111111 1111 22356899999999999842  1  3567888776663

>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=98.32  E-value=1.1e-06  Score=72.65  Aligned_cols=101  Identities=8%  Similarity=-0.070  Sum_probs=62.2

Q ss_pred             EEeeCCCCCcccccCccccCcceEEEccCCCCCCCccEEEEEc-CCCceeEEecCCeeEEeeCCcCCcccccccccccee
Q 006915           17 LWESFKYPTDTFLAGMYMGENLSLTSWAGHDDPKPGNFTFKMD-QGENQYQITKPLIRHWRSAESKDVFSSNEIIPYQIL   95 (626)
Q Consensus        17 lWqSFd~PtDTllpgq~l~~~~~L~S~~s~~d~s~G~~~l~~~-~~~~~~~~~~~~~~yw~~~~~~~~~~~~~~~~~~~~   95 (626)
                      .||+||.|.+||-++|.|.    +.+       +.|+|+|.|+ +|+..+  +.+...+|.+......       .....
T Consensus         6 s~~~~~~~~~~l~~~q~l~----~~~-------~~~~y~l~mQ~DGNLVL--y~~~~~vWssnt~~~~-------~~~~l   65 (119)
T d1b2pa_           6 SKQPDDNHPQILHATESLE----ILF-------GTHVYRFIMQTDCNLVL--YDNNNPIWATNTGGLG-------NGCRA   65 (119)
T ss_dssp             CSCSSSCCCCEEETTCEEE----EEE-------TTEEEEEEECTTSCEEE--EETTEEEEECCCTTSC-------SSCEE
T ss_pred             eeecCCCCCCEEeCCCeEE----Eec-------CCceEEEEECCCCcEEE--EECCeEEEEecCCCCC-------cceEE
Confidence            4899999999999999985    222       6899999999 888665  4667889998754321       00111


Q ss_pred             ce--eeeeeeeecCCCCceeEEEEEecCCCceeEEEEEeecccEEEEE
Q 006915           96 NL--LSNFSHSVKPTGKNAVHPNLIVPSIDYSRTRLIMNYTGEIQYWT  141 (626)
Q Consensus        96 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rl~l~~dG~l~~~~  141 (626)
                      .+  ...+...+.   .+...-...... .....+++|+.||+|++|.
T Consensus        66 ~l~~dGnLvL~d~---~g~~vWsS~t~~-~~~~~~l~Lq~DGNlvlYg  109 (119)
T d1b2pa_          66 VLQPDGVLVVITN---ENVTVWQSPVAG-KAGHYVLVLQPDRNVVIYG  109 (119)
T ss_dssp             EECTTSCEEEECT---TCCEEEECSCCC-CSSCEEEEECTTSCEEEEE
T ss_pred             EEEeCCCEEEECC---CCcEEEECCCcC-CCCceEEEEcCCCCEEEEC
Confidence            11  111222222   222221111111 2235689999999999984

>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Snowdrop (Galanthus nivalis) [TaxId: 4670]

Probab=98.04  E-value=1.2e-05  Score=65.24  Aligned_cols=96  Identities=10%  Similarity=0.032  Sum_probs=57.4

Q ss_pred             cccccCccccCcceEEEccCCCCCCCccEEEEEc-CCCceeEEecCCeeEEeeCCcCCccccccccccceeceeeeeeee
Q 006915           26 DTFLAGMYMGENLSLTSWAGHDDPKPGNFTFKMD-QGENQYQITKPLIRHWRSAESKDVFSSNEIIPYQILNLLSNFSHS  104 (626)
Q Consensus        26 DTllpgq~l~~~~~L~S~~s~~d~s~G~~~l~~~-~~~~~~~~~~~~~~yw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (626)
                      |||+|||.|..+..|.         .|.|+|.|+ +|+..+  +.+..++|.+......  +   ...........+...
T Consensus         2 ~~L~~g~~L~~G~~l~---------ng~~~l~~q~DGNLvl--y~~~~~vW~s~~~~~~--~---~~~l~l~~~Gnlvl~   65 (108)
T d1jpca_           2 NILYSGETLSTGEFLN---------YGSFVFIMQEDCNLVL--YDVDKPIWATNTGGLS--R---SCFLSMQTDGNLVVY   65 (108)
T ss_dssp             CEEETTEEECTTCEEE---------ETTEEEEECTTSCEEE--EETTEEEEECCCTTSC--S---SCEEEECTTSCEEEE
T ss_pred             CCccCCCEecCCCEEE---------cCCEEEEECCCCeEEE--EeCCceeeEeCCCCCC--C---ccEEEEeccceEEEE
Confidence            8999999999999995         389999999 777644  5677889987654321  0   000010101112112


Q ss_pred             ecCCCCceeEEEEEecCCCceeEEEEEeecccEEEEE
Q 006915          105 VKPTGKNAVHPNLIVPSIDYSRTRLIMNYTGEIQYWT  141 (626)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~rl~l~~dG~l~~~~  141 (626)
                      ..   .+...-+..... .....+++|..||+|++|.
T Consensus        66 ~~---~g~~vWsS~t~~-~~~~~~l~L~ddGNlVly~   98 (108)
T d1jpca_          66 NP---SNKPIWASNTGG-QNGNYVCILQKDRNVVIYG   98 (108)
T ss_dssp             CT---TCCEEEECCCCC-SCSCEEEEECTTSCEEEEE
T ss_pred             CC---CccceEEccccC-CCCcEEEEEcCCCCEEEeC
Confidence            22   222222211111 2235679999999999994

>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Garlic (Allium sativum) [TaxId: 4682]

Probab=97.97  E-value=1.6e-05  Score=64.50  Aligned_cols=94  Identities=13%  Similarity=0.047  Sum_probs=55.9

Q ss_pred             cccccCccccCcceEEEccCCCCCCCccEEEEEc-CCCceeEEecCCeeEEeeCCcCCccccccccccceece--eeeee
Q 006915           26 DTFLAGMYMGENLSLTSWAGHDDPKPGNFTFKMD-QGENQYQITKPLIRHWRSAESKDVFSSNEIIPYQILNL--LSNFS  102 (626)
Q Consensus        26 DTllpgq~l~~~~~L~S~~s~~d~s~G~~~l~~~-~~~~~~~~~~~~~~yw~~~~~~~~~~~~~~~~~~~~~~--~~~~~  102 (626)
                      |||.|||.|..+..|++         |.|+|.|+ +|+..+  +.....+|.+........      .....+  ...+.
T Consensus         2 ~~L~~g~~L~~g~~l~~---------g~~~l~~q~dgnLvl--~~~~~~vW~ant~~~~~~------~~~l~l~~dGnLv   64 (109)
T d1kj1a_           2 NLLTNGEGLYAGQSLDV---------EPYHFIMQEDCNLVL--YDHSTSVWASNTGILGKK------GCKAVLQSDGNFV   64 (109)
T ss_dssp             CEEETTCEEETTCEEEE---------TTEEEEECTTSCEEE--EETTEEEEECCCCCTTCC------CCEEEECTTSCEE
T ss_pred             CCccCCCEEeCCCEEEe---------CCEEEEecCCCeEEE--EeCCEEEEEeCCCCCCce------eEEEEEcCCceEE
Confidence            89999999999999965         89999999 777654  456788998754332100      011111  11121


Q ss_pred             eeecCCCCceeEEEEEecCCCceeEEEEEeecccEEEE
Q 006915          103 HSVKPTGKNAVHPNLIVPSIDYSRTRLIMNYTGEIQYW  140 (626)
Q Consensus       103 ~~~~~~~~~~~~~~~~~~~~~~~~~rl~l~~dG~l~~~  140 (626)
                      ..+.  .....+.+ .... .....+++|..||+|++|
T Consensus        65 l~~~--~g~~vW~s-~t~~-~~~~~~l~L~ddGNlvly   98 (109)
T d1kj1a_          65 VYDA--EGRSLWAS-HSVR-GNGNYVLVLQEDGNVVIY   98 (109)
T ss_dssp             EECS--SSCEEEEC-CCCC-CSSCCEEEECTTSCEEEE
T ss_pred             EEeC--CCcEEEEE-eeEC-CCCCEEEEEeCCCcEEEE
Confidence            2222  01122221 1111 223468999999999998

>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=97.94  E-value=2.2e-06  Score=70.27  Aligned_cols=74  Identities=16%  Similarity=0.237  Sum_probs=49.4

Q ss_pred             CCcccEEEEeCCCCceEEeeCCCCC-cc---cccCcccc--CcceEEEccCCCCCCCccEEEEEc-CCCceeEEecCCee
Q 006915            1 MDSGNFVLQDDQVRKNLWESFKYPT-DT---FLAGMYMG--ENLSLTSWAGHDDPKPGNFTFKMD-QGENQYQITKPLIR   73 (626)
Q Consensus         1 ldsGNlvl~~~~~~~~lWqSFd~Pt-DT---llpgq~l~--~~~~L~S~~s~~d~s~G~~~l~~~-~~~~~~~~~~~~~~   73 (626)
                      +++|||||++.  +.++|+|..+-. .+   |...-.|.  -...-+=|.+.++.+.|.|.|.|+ +|...+|    ..+
T Consensus        33 q~DGNLvL~~~--~~~vW~s~t~~~~~~~l~l~~dGNLvl~d~~~~~vWsS~t~~~~g~y~l~Lq~DGNlvlY----~~~  106 (115)
T d1dlpa1          33 QSDCNLVLFDS--DVRVWASNTAGATGCRAVLQSDGLLVILTAQNTIRWSSGTKGSIGNYVLVLQPDRTVTIY----GPG  106 (115)
T ss_dssp             CTTSCEEEEES--SSEEECCCCCSCSCCBCCBCSSSCBCCBCTTTCCSCCCCCCCCSSCCEEEECSSSCEEEE----CSE
T ss_pred             CCCCeEEEEcC--CeeEEEcccCCCCceEEEEeccCCEEEEccCCCEEEEcCCCCCCCCEEEEECCCCcEEEe----CCC
Confidence            47899999984  578999987622 11   11111111  111134588999999999999999 7877654    357


Q ss_pred             EEeeCCc
Q 006915           74 HWRSAES   80 (626)
Q Consensus        74 yw~~~~~   80 (626)
                      +|.++.-
T Consensus       107 ~Wssgt~  113 (115)
T d1dlpa1         107 LWDSGTS  113 (115)
T ss_dssp             EEECSCC
T ss_pred             eecCCCC
Confidence            9998754

>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=97.81  E-value=7.2e-06  Score=67.83  Aligned_cols=24  Identities=13%  Similarity=0.448  Sum_probs=18.4

Q ss_pred             ccCCCCCCCccEEEEEc-CCCceeE
Q 006915           43 WAGHDDPKPGNFTFKMD-QGENQYQ   66 (626)
Q Consensus        43 ~~s~~d~s~G~~~l~~~-~~~~~~~   66 (626)
                      |.|.++.+.|.|.|.|| +|...+|
T Consensus        89 W~S~t~~~~~~~~l~Lq~DGnlvlY  113 (120)
T d1dlpa2          89 WTSGNSRSAGRYVFVLQPDRNLAIY  113 (120)
T ss_dssp             EECCCCCSSSCCEEEECSSSCEEEE
T ss_pred             EEeCCCCCCCcEEEEECCCCcEEEe
Confidence            45556678899999999 7877665

>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=96.95  E-value=0.00055  Score=55.55  Aligned_cols=89  Identities=11%  Similarity=0.076  Sum_probs=47.6

Q ss_pred             CcccccCccccCcceEEEccCCCCCCCccEEEEEc-CCCceeEEecCCeeEEeeCCcCCccccccccccceeceeeeeee
Q 006915           25 TDTFLAGMYMGENLSLTSWAGHDDPKPGNFTFKMD-QGENQYQITKPLIRHWRSAESKDVFSSNEIIPYQILNLLSNFSH  103 (626)
Q Consensus        25 tDTllpgq~l~~~~~L~S~~s~~d~s~G~~~l~~~-~~~~~~~~~~~~~~yw~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (626)
                      ++||-++|.|.               .|.|+|.|+ +|+..+  +.+...+|.+......      ...........+.+
T Consensus        14 ~~tl~~~~~l~---------------~g~~~l~~q~DGNLvL--~~~~~~vW~s~t~~~~------~~~l~l~~dGNLvl   70 (115)
T d1dlpa1          14 PQTLHAAQSLE---------------LSSFRFTMQSDCNLVL--FDSDVRVWASNTAGAT------GCRAVLQSDGLLVI   70 (115)
T ss_dssp             CSCCCTTCEEC---------------STTEEEEECTTSCEEE--EESSSEEECCCCCSCS------CCBCCBCSSSCBCC
T ss_pred             cceecCCCcEE---------------cCCEEEEECCCCeEEE--EcCCeeEEEcccCCCC------ceEEEEeccCCEEE
Confidence            47777777663               478999999 888654  4567789987643211      00000110111111


Q ss_pred             eecCCCCceeEEEEEecCCCceeEEEEEeecccEEEE
Q 006915          104 SVKPTGKNAVHPNLIVPSIDYSRTRLIMNYTGEIQYW  140 (626)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~rl~l~~dG~l~~~  140 (626)
                      .+.  ....++.+....  .....+++|+.||++++|
T Consensus        71 ~d~--~~~~vWsS~t~~--~~g~y~l~Lq~DGNlvlY  103 (115)
T d1dlpa1          71 LTA--QNTIRWSSGTKG--SIGNYVLVLQPDRTVTIY  103 (115)
T ss_dssp             BCT--TTCCSCCCCCCC--CSSCCEEEECSSSCEEEE
T ss_pred             Ecc--CCCEEEEcCCCC--CCCCEEEEECCCCcEEEe
Confidence            111  011222222111  223457999999999998

>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=96.86  E-value=0.0015  Score=53.16  Aligned_cols=73  Identities=15%  Similarity=0.196  Sum_probs=47.0

Q ss_pred             CCcccEEEEeCCCCceEEeeCCCCCc--ccccCcc---c--cCcceEEEccCCCCCCCccEEEEEc-CCCceeEEecCCe
Q 006915            1 MDSGNFVLQDDQVRKNLWESFKYPTD--TFLAGMY---M--GENLSLTSWAGHDDPKPGNFTFKMD-QGENQYQITKPLI   72 (626)
Q Consensus         1 ldsGNlvl~~~~~~~~lWqSFd~PtD--Tllpgq~---l--~~~~~L~S~~s~~d~s~G~~~l~~~-~~~~~~~~~~~~~   72 (626)
                      +.+|||||++.  +.++|+|..+...  +-|-=|.   |  -....-+=|.+.+.-+.|.|.+.|+ +|...++    ..
T Consensus        37 Q~DGNLVLy~~--~~~vWssnt~~~~~~~~l~l~~dGnLvL~d~~g~~vWsS~t~~~~~~~~l~Lq~DGNlvlY----g~  110 (119)
T d1b2pa_          37 QTDCNLVLYDN--NNPIWATNTGGLGNGCRAVLQPDGVLVVITNENVTVWQSPVAGKAGHYVLVLQPDRNVVIY----GD  110 (119)
T ss_dssp             CTTSCEEEEET--TEEEEECCCTTSCSSCEEEECTTSCEEEECTTCCEEEECSCCCCSSCEEEEECTTSCEEEE----ES
T ss_pred             CCCCcEEEEEC--CeEEEEecCCCCCcceEEEEEeCCCEEEECCCCcEEEECCCcCCCCceEEEEcCCCCEEEE----CC
Confidence            47899999985  4789999987642  2221111   1  1111123366777777789999999 7777765    24


Q ss_pred             eEEeeCC
Q 006915           73 RHWRSAE   79 (626)
Q Consensus        73 ~yw~~~~   79 (626)
                      +.|.++.
T Consensus       111 ~~W~S~T  117 (119)
T d1b2pa_         111 ALWATQT  117 (119)
T ss_dssp             EEEECCC
T ss_pred             CEeccCC
Confidence            6888764

>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Snowdrop (Galanthus nivalis) [TaxId: 4670]

Probab=96.75  E-value=0.0013  Score=52.64  Aligned_cols=72  Identities=18%  Similarity=0.304  Sum_probs=45.5

Q ss_pred             CCcccEEEEeCCCCceEEeeCCCCCcc--ccc---Ccccc--CcceEEEccCCCCCCCccEEEEEc-CCCceeEEecCCe
Q 006915            1 MDSGNFVLQDDQVRKNLWESFKYPTDT--FLA---GMYMG--ENLSLTSWAGHDDPKPGNFTFKMD-QGENQYQITKPLI   72 (626)
Q Consensus         1 ldsGNlvl~~~~~~~~lWqSFd~PtDT--llp---gq~l~--~~~~L~S~~s~~d~s~G~~~l~~~-~~~~~~~~~~~~~   72 (626)
                      +.+|||||++.  +.+||+|..++..+  -|-   .-.|.  -...-+=|.+.+....+.|.+.|+ +|+..++    ..
T Consensus        26 q~DGNLvly~~--~~~vW~s~~~~~~~~~~l~l~~~Gnlvl~~~~g~~vWsS~t~~~~~~~~l~L~ddGNlVly----~~   99 (108)
T d1jpca_          26 QEDCNLVLYDV--DKPIWATNTGGLSRSCFLSMQTDGNLVVYNPSNKPIWASNTGGQNGNYVCILQKDRNVVIY----GT   99 (108)
T ss_dssp             CTTSCEEEEET--TEEEEECCCTTSCSSCEEEECTTSCEEEECTTCCEEEECCCCCSCSCEEEEECTTSCEEEE----EC
T ss_pred             CCCCeEEEEeC--CceeeEeCCCCCCCccEEEEeccceEEEECCCccceEEccccCCCCcEEEEEcCCCCEEEe----CC
Confidence            46899999985  57999999987432  111   11111  111123477777778888999998 7777665    22


Q ss_pred             eEEeeC
Q 006915           73 RHWRSA   78 (626)
Q Consensus        73 ~yw~~~   78 (626)
                      +.|.++
T Consensus       100 ~~W~S~  105 (108)
T d1jpca_         100 DRWATG  105 (108)
T ss_dssp             CCCCCC
T ss_pred             CcccCC
Confidence            466654

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=96.33  E-value=0.0015  Score=61.20  Aligned_cols=28  Identities=29%  Similarity=0.374  Sum_probs=24.9

Q ss_pred             ceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          510 RIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       510 ~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      .++|+|+.|.|||++++..+-|+||+.+
T Consensus       184 ~l~HgD~~~~Nil~~~~~~~~lIDwe~a  211 (263)
T d1j7la_         184 VFSHGDLGDSNIFVKDGKVSGFIDLGRS  211 (263)
T ss_dssp             EEECSCCCTTSEEEETTEEEEECCCTTC
T ss_pred             EEEEeeccCcceeecCCceEEEeechhc
Confidence            3799999999999998776779999987

>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Gastrodianin (antifungal protein)
species: Gastrodia elata [TaxId: 91201]

Probab=96.24  E-value=0.0092  Score=47.82  Aligned_cols=76  Identities=16%  Similarity=0.266  Sum_probs=46.7

Q ss_pred             CCcccEEEEeCCCCceEEeeCCCCCcccccCccccCcce-------EEEccCCCCCCCccEEEEEc-CCCceeEEecCCe
Q 006915            1 MDSGNFVLQDDQVRKNLWESFKYPTDTFLAGMYMGENLS-------LTSWAGHDDPKPGNFTFKMD-QGENQYQITKPLI   72 (626)
Q Consensus         1 ldsGNlvl~~~~~~~~lWqSFd~PtDTllpgq~l~~~~~-------L~S~~s~~d~s~G~~~l~~~-~~~~~~~~~~~~~   72 (626)
                      +++|||||++.  +.++|+|..++...= +...|..+..       =.-|.+.+.-..|.|.+.|+ +|...++- ....
T Consensus        26 q~DGNLvly~~--~~~vW~s~~~~~~~~-~~l~l~~dGnLvl~~~~~~~w~s~t~~~~~~~~l~L~ddGNlvly~-~~~~  101 (112)
T d1xd5a_          26 QNDCNLVLYDN--NRAVWASGTNGKASG-CVLKMQNDGNLVIYSGSRAIWASNTNRQNGNYYLILQRDRNVVIYD-NSNN  101 (112)
T ss_dssp             CTTSCEEEEET--TEEEEECCCTTSCSS-EEEEECTTSCEEEEETTEEEEECCCCCSCCCCEEEECTTSCEEEEC-TTSC
T ss_pred             cCCCCEEEEcC--CcEEEEccCccCCCC-cEEEEeccccEEEEecCCeEEEEeeccCCCceEEEEcCCCCEEEEC-CCCc
Confidence            46899999985  579999987653210 0112221111       12355556666788999999 67666543 3456


Q ss_pred             eEEeeCCc
Q 006915           73 RHWRSAES   80 (626)
Q Consensus        73 ~yw~~~~~   80 (626)
                      +.|.++..
T Consensus       102 ~~W~S~t~  109 (112)
T d1xd5a_         102 AIWATHTN  109 (112)
T ss_dssp             EEEECCCC
T ss_pred             EEecCCCc
Confidence            78887643

>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Garlic (Allium sativum) [TaxId: 4682]

Probab=96.21  E-value=0.0078  Score=47.99  Aligned_cols=74  Identities=18%  Similarity=0.285  Sum_probs=43.5

Q ss_pred             CCcccEEEEeCCCCceEEeeCCC-CCc-----ccccCcccc--CcceEEEccCCCCCCCccEEEEEc-CCCceeEEecCC
Q 006915            1 MDSGNFVLQDDQVRKNLWESFKY-PTD-----TFLAGMYMG--ENLSLTSWAGHDDPKPGNFTFKMD-QGENQYQITKPL   71 (626)
Q Consensus         1 ldsGNlvl~~~~~~~~lWqSFd~-PtD-----Tllpgq~l~--~~~~L~S~~s~~d~s~G~~~l~~~-~~~~~~~~~~~~   71 (626)
                      +.+|||||+..  +.++|+|..+ |-.     +|-+.-.|.  ....=+=|.+.+..+.|.|.+.|+ +|+..++    .
T Consensus        26 q~dgnLvl~~~--~~~vW~ant~~~~~~~~~l~l~~dGnLvl~~~~g~~vW~s~t~~~~~~~~l~L~ddGNlvly----~   99 (109)
T d1kj1a_          26 QEDCNLVLYDH--STSVWASNTGILGKKGCKAVLQSDGNFVVYDAEGRSLWASHSVRGNGNYVLVLQEDGNVVIY----G   99 (109)
T ss_dssp             CTTSCEEEEET--TEEEEECCCCCTTCCCCEEEECTTSCEEEECSSSCEEEECCCCCCSSCCEEEECTTSCEEEE----C
T ss_pred             cCCCeEEEEeC--CEEEEEeCCCCCCceeEEEEEcCCceEEEEeCCCcEEEEEeeECCCCCEEEEEeCCCcEEEE----C
Confidence            36899999984  5789999765 211     111111221  001112366666666788888888 7776654    2


Q ss_pred             eeEEeeCCc
Q 006915           72 IRHWRSAES   80 (626)
Q Consensus        72 ~~yw~~~~~   80 (626)
                      .+.|.++.+
T Consensus       100 ~~~W~S~t~  108 (109)
T d1kj1a_         100 SDIWSTGTY  108 (109)
T ss_dssp             CEEEECCCC
T ss_pred             CCEecCCCc
Confidence            357877654

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=94.86  E-value=0.008  Score=55.72  Aligned_cols=28  Identities=21%  Similarity=0.253  Sum_probs=25.2

Q ss_pred             ceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          510 RIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       510 ~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      .++|+|+.|.|||++++..+-|+||+.+
T Consensus       176 ~liHgD~~~~Nvl~~~~~~~~iID~~~~  203 (255)
T d1nd4a_         176 VVTHGDACLPNIMVENGRFSGFIDCGRL  203 (255)
T ss_dssp             EEECSSCCGGGEEEETTEEEEECCCTTC
T ss_pred             eEEeCCCCCcceEEeCCceEEEEEchhc
Confidence            4799999999999998777789999987

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=94.85  E-value=0.026  Score=56.01  Aligned_cols=28  Identities=32%  Similarity=0.434  Sum_probs=24.7

Q ss_pred             CceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          509 LRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       509 ~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      ..++|+|+.|.|||++++. ++|+||-.+
T Consensus       223 ~~LiHGDl~~gNIlv~~~~-~~vID~E~a  250 (392)
T d2pula1         223 ETLIHGDLHTGSIFASEHE-TKVIDPEFA  250 (392)
T ss_dssp             CEEECSCCCGGGEEECSSC-EEECCCTTC
T ss_pred             cceeccCCcCCceeEcCCc-eEEechhhc
Confidence            4599999999999998764 899999887

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=93.96  E-value=0.16  Score=48.26  Aligned_cols=28  Identities=29%  Similarity=0.399  Sum_probs=26.1

Q ss_pred             ceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          510 RIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       510 ~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      .+||+|+.+.||+++++...-|.||+.+
T Consensus       184 giIHgDl~~dNvl~~~~~v~gvIDF~~~  211 (316)
T d2ppqa1         184 GVIHADLFQDNVFFLGDELSGLIDFYFA  211 (316)
T ss_dssp             EEECSCCCGGGEEEETTEEEEECCCTTC
T ss_pred             ccccCCcchhhhhcccccceeEeccccc
Confidence            5999999999999999887889999988

>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.67  E-value=0.012  Score=35.03  Aligned_cols=32  Identities=44%  Similarity=0.951  Sum_probs=25.3

Q ss_pred             CCCCCCCCCCCCCcccCCC-CCCccccCCCCccC
Q 006915          156 RDNCSVFHYCGNFGICNSN-HKRKCQCLQGFVPS  188 (626)
Q Consensus       156 ~~~C~~~~~CG~~g~C~~~-~~~~C~C~~Gf~~~  188 (626)
                      .|+|.+-+.||. |.|++- ..-.|.|-.||+|.
T Consensus         1 tdECsignpCGn-GTCtNviGgFec~C~~GFepg   33 (39)
T d1emoa2           1 TDECSVGNPCGN-GTCKNVIGGFECTCEEGFEPG   33 (39)
T ss_dssp             CCGGGTTCSSSS-SCEEECSSSEEECCSSSSCCC
T ss_pred             CCccccCCccCC-ceeeecccceEEeecCCcCCC
Confidence            378999999995 889643 34469999999985

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=92.61  E-value=0.13  Score=49.19  Aligned_cols=28  Identities=29%  Similarity=0.381  Sum_probs=23.1

Q ss_pred             CCceEecCCCCCCeEECCCCcEEEEecCcc
Q 006915          508 RLRIIHRDLKTSNILLDQEMNPKISDFGLA  537 (626)
Q Consensus       508 ~~~ivHrDlkp~NILl~~~~~~kl~DFGla  537 (626)
                      +..+||+|+.+.|||++++  ..++||+-+
T Consensus       191 p~~liHgDlh~~NvL~~~~--~~~IDFdd~  218 (325)
T d1zyla1         191 TVLRLHGDCHAGNILWRDG--PMFVDLDDA  218 (325)
T ss_dssp             CCEECCSSCSGGGEEESSS--EEECCCTTC
T ss_pred             CceeecCCCCcccEEEeCC--ceEEechhc
Confidence            3468999999999999754  458999877

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.48  E-value=0.098  Score=33.20  Aligned_cols=31  Identities=39%  Similarity=0.863  Sum_probs=24.0

Q ss_pred             CCCCC-CCCCCCCcccCCC-CCCccccCCCCcc
Q 006915          157 DNCSV-FHYCGNFGICNSN-HKRKCQCLQGFVP  187 (626)
Q Consensus       157 ~~C~~-~~~CG~~g~C~~~-~~~~C~C~~Gf~~  187 (626)
                      |+|.. ...|..+|.|... ..-.|.|++||.-
T Consensus         4 deC~~~~~pC~n~g~C~n~~g~y~C~C~~G~~G   36 (42)
T d2vj3a1           4 DECSLGANPCEHAGKCINTLGSFECQCLQGYTG   36 (42)
T ss_dssp             CTTTSSSCSSSTTCEEEECSSSEEEECCTTEES
T ss_pred             ccccCCCCCCCCCcEeECCCCCEEeECCCCCcC
Confidence            67875 5789999999644 3456999999973

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.10  E-value=0.18  Score=31.33  Aligned_cols=30  Identities=37%  Similarity=0.865  Sum_probs=22.8

Q ss_pred             CCCCCCCCCCCCcccCCC-CCCccccCCCCcc
Q 006915          157 DNCSVFHYCGNFGICNSN-HKRKCQCLQGFVP  187 (626)
Q Consensus       157 ~~C~~~~~CG~~g~C~~~-~~~~C~C~~Gf~~  187 (626)
                      |+|. ...|...|.|... ..-.|.|++||.-
T Consensus         1 D~C~-~~PC~ngg~C~~~~~~y~C~C~~G~~G   31 (39)
T d1xkba1           1 DQCE-TSPCQNQGKCKDGLGEYTCTCLEGFEG   31 (39)
T ss_dssp             CTTT-TCCCCSSCEECCCSSSCCEECCTTEET
T ss_pred             CcCC-CCCCCCCcEEECCCCCEEEECCCCCCc
Confidence            4565 5789999999754 3557999999974

>d1dx5i2 g.3.11.1 (I:388-422) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.85  E-value=0.22  Score=28.79  Aligned_cols=18  Identities=28%  Similarity=0.951  Sum_probs=13.9

Q ss_pred             ccCCCCCCccccCCCCcc
Q 006915          170 ICNSNHKRKCQCLQGFVP  187 (626)
Q Consensus       170 ~C~~~~~~~C~C~~Gf~~  187 (626)
                      .|+.+....|+||.||.-
T Consensus        11 dCdP~~p~~C~CPeGyIl   28 (35)
T d1dx5i2          11 DCDPNTQASCECPEGYIL   28 (35)
T ss_dssp             EECTTSTTCEECCTTEEE
T ss_pred             ccCCCCCCcccCCCceEe
Confidence            466667778999999964