BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006917
(625 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SVN5|SYM_ARATH Probable methionine--tRNA ligase OS=Arabidopsis thaliana
GN=At4g13780 PE=2 SV=1
Length = 797
Score = 1009 bits (2608), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 477/615 (77%), Positives = 535/615 (86%), Gaps = 7/615 (1%)
Query: 7 EPDGERNHRVAKLPVPGKRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNA 66
E DG+ + KLP+PGKRNILITSALPYVNNVPHLGNIIGCVLSADV+ARYCRLRGYNA
Sbjct: 2 EDDGKSS---PKLPIPGKRNILITSALPYVNNVPHLGNIIGCVLSADVYARYCRLRGYNA 58
Query: 67 LYICGTDEYGTATETKAMEENCTTQQICDKYYAIHKAVYNWFNISFDEFGRTSTPQQTEI 126
+YICGTDEYGTATETKA+EENCT ++ICDKY+AIHK VY+WF ISFD+FGRTSTP+QTE+
Sbjct: 59 IYICGTDEYGTATETKALEENCTPKEICDKYHAIHKEVYDWFGISFDKFGRTSTPEQTEV 118
Query: 127 CQAIFKKLLENNWLSEYTTQQLYCDTCKRFLADRLVEGSCPTLGCNYDSARGDQCEKCGK 186
CQAIF KL +N WLSE T QQLYCDTCK+FLADRLVEGSCP GCNYDSARGDQCEKCGK
Sbjct: 119 CQAIFNKLWDNKWLSENTMQQLYCDTCKKFLADRLVEGSCPFEGCNYDSARGDQCEKCGK 178
Query: 187 LLNPTELKDPRCKVCQATPKIRDTDHLFLELPLIKDKLEEYINKMSVSGSWSQNAIQGTY 246
LLNPTELKDP+CKVCQ TP+IRDTDHLF+ELPL+KD+LE YI K SV+GSWSQNAIQ T
Sbjct: 179 LLNPTELKDPKCKVCQNTPRIRDTDHLFIELPLLKDRLEAYIKKTSVTGSWSQNAIQTTN 238
Query: 247 AWLKDGLKPRCITRDLKWGVPVPHEKFKDKVFYVWFDAPIGYISITSCYTPDWEEWWKNP 306
AWL+DGL+ RCITRDLKWGVPVPHEK+KDKVFYVWFDAPIGY+SITSCYT +WE+WWKNP
Sbjct: 239 AWLRDGLRQRCITRDLKWGVPVPHEKYKDKVFYVWFDAPIGYVSITSCYTSEWEKWWKNP 298
Query: 307 ENVALYQFMGKDNAPFHTVMFPSTLLGTEENWTLMKTISVTEYLNYEAGKFSKSKGVGVF 366
ENV LYQFMGKDN PFHTVMFPST LGTEENWTLMKTISVTEYLNYE GKFSKSKGVGVF
Sbjct: 299 ENVELYQFMGKDNVPFHTVMFPSTQLGTEENWTLMKTISVTEYLNYEDGKFSKSKGVGVF 358
Query: 367 GNDVKDTNIPAEVWRYYLITNRPEVSDTLFTWEDFQAKLNTELLNNLGNFVNRVLSFIAK 426
GNDVKDTNIP EVWRYYL+TNRPEVSDT F+W D QAKLN ELL+NLGNFVNRVLSFIAK
Sbjct: 359 GNDVKDTNIPVEVWRYYLLTNRPEVSDTSFSWTDLQAKLNGELLSNLGNFVNRVLSFIAK 418
Query: 427 PPGRGYGSIIPDSPKADLHPSTKMLAEKISNHIDQYIEAMEKVKLKQGLRIGMSISSEGN 486
P GYGS+IPD+ A+ H TK LAEK+ + +Y+EAMEKVKLKQGL+ M ISSEGN
Sbjct: 419 PDNAGYGSVIPDAHDAESHSLTKSLAEKVEKFVAEYVEAMEKVKLKQGLKTAMLISSEGN 478
Query: 487 AYLQESQFWKLYNEDQGSCSIVIRTSVGLVYLLACLLEPFMPSFSLEVLKQLNVPTETKF 546
YLQ SQFWKLY ED+ C++VIRT+ GLV+LLA LLEPFMPSFS EV KQLN+P + F
Sbjct: 479 YYLQASQFWKLYKEDKPLCAVVIRTAAGLVHLLAQLLEPFMPSFSCEVFKQLNLPPQ--F 536
Query: 547 SLSDENGDLERARKPWEILPAGHRIGMSSPLFKELKDEDVRFFREKFAGSQADRAVQAEA 606
SLSDE G++ A +PW+ILP HRIG PLFKEL++++V +REKFAGSQ+DR +A
Sbjct: 537 SLSDERGEVLLASRPWDILPPSHRIGTPQPLFKELENDEVARYREKFAGSQSDR--RARD 594
Query: 607 EAKRLAEHLKKTKIS 621
EA LA+ L KTK+S
Sbjct: 595 EAANLADQLNKTKLS 609
>sp|Q9ZTS1|SYM_ORYSJ Probable methionine--tRNA ligase OS=Oryza sativa subsp. japonica
GN=Os06g0508700 PE=2 SV=2
Length = 801
Score = 1007 bits (2604), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/601 (76%), Positives = 529/601 (88%), Gaps = 2/601 (0%)
Query: 23 GKRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNALYICGTDEYGTATETK 82
G+RNIL+TSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYN +YICGTDEYGTATETK
Sbjct: 14 GRRNILVTSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNVIYICGTDEYGTATETK 73
Query: 83 AMEENCTTQQICDKYYAIHKAVYNWFNISFDEFGRTSTPQQTEICQAIFKKLLENNWLSE 142
AMEE C+ ++ICDKY+A+H VY WF+I FD+FGRTS+PQQTE+CQAIF+KL+ENNWL+E
Sbjct: 74 AMEEKCSPKEICDKYHAVHSEVYKWFDIKFDKFGRTSSPQQTEVCQAIFQKLMENNWLTE 133
Query: 143 YTTQQLYCDTCKRFLADRLVEGSCPTLGCNYDSARGDQCEKCGKLLNPTELKDPRCKVCQ 202
T QQLYCDTC+RFLADRLVEG CPT GCNY++ARGDQCE C KLLNPTEL DP+CKVC+
Sbjct: 134 NTMQQLYCDTCQRFLADRLVEGKCPTEGCNYEAARGDQCENCSKLLNPTELIDPKCKVCK 193
Query: 203 ATPKIRDTDHLFLELPLIKDKLEEYINKMSVSGSWSQNAIQGTYAWLKDGLKPRCITRDL 262
TP++RDTDHLFLELPL+ DKL YIN+ SV+G WSQNAIQ T AWLK+GLKPRCITRDL
Sbjct: 194 NTPRVRDTDHLFLELPLLSDKLVNYINETSVAGMWSQNAIQATNAWLKEGLKPRCITRDL 253
Query: 263 KWGVPVPHEKFKDKVFYVWFDAPIGYISITSCYTPDWEEWWKNPENVALYQFMGKDNAPF 322
KWGVPVPHEK+KDKVFYVWFDAPIGY+SIT+ YTPDWE+WWK+P+NV L+QFMGKDN PF
Sbjct: 254 KWGVPVPHEKYKDKVFYVWFDAPIGYVSITASYTPDWEKWWKDPDNVELFQFMGKDNVPF 313
Query: 323 HTVMFPSTLLGTEENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGNDVKDTNIPAEVWRY 382
HTVMFPSTLLGT E WT+MKTISVTEYLNYEAGKFSKS G+GVFGND KDTNIP EVWRY
Sbjct: 314 HTVMFPSTLLGTGEKWTMMKTISVTEYLNYEAGKFSKSHGIGVFGNDAKDTNIPPEVWRY 373
Query: 383 YLITNRPEVSDTLFTWEDFQAKLNTELLNNLGNFVNRVLSFIAKPPGRGYGSIIPDSPKA 442
YL+TNRPEVSDTLFTW D QAKLN+ELLNNLGNF+NRVLSF+AKP G GY SI+PD+P A
Sbjct: 374 YLLTNRPEVSDTLFTWADLQAKLNSELLNNLGNFINRVLSFVAKPAGAGYDSIVPDAPNA 433
Query: 443 DLHPSTKMLAEKISNHIDQYIEAMEKVKLKQGLRIGMSISSEGNAYLQESQFWKLYNEDQ 502
+ HP TK L EK + ++QY+EAMEKVKLKQGL+ M ISS+GNAYLQESQFWKLY ED
Sbjct: 434 ESHPLTKALVEKTNKWVEQYLEAMEKVKLKQGLKSAMGISSDGNAYLQESQFWKLYKEDP 493
Query: 503 GSCSIVIRTSVGLVYLLACLLEPFMPSFSLEVLKQLNVPTETKFSLSDENGDLERARKPW 562
+C++V++TSVG+VYLLACLLEPFMPSFS EVL QLN+ E S D+ G++ +A++PW
Sbjct: 494 AACAVVMKTSVGVVYLLACLLEPFMPSFSNEVLLQLNMTPEESLSFCDDKGEIAKAKRPW 553
Query: 563 EILPAGHRIGMSSPLFKELKDEDVRFFREKFAGSQADRA--VQAEAEAKRLAEHLKKTKI 620
+ + AGH+IG SPLFKELKDE+V FR KFAGSQA+R+ QA+AEAK++A+ LK TK+
Sbjct: 554 DFVSAGHKIGKPSPLFKELKDEEVESFRNKFAGSQAERSSKAQADAEAKKVADKLKGTKL 613
Query: 621 S 621
S
Sbjct: 614 S 614
>sp|Q54X95|SYMC_DICDI Probable methionine--tRNA ligase, cytoplasmic OS=Dictyostelium
discoideum GN=metS PE=3 SV=1
Length = 736
Score = 679 bits (1751), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/580 (55%), Positives = 424/580 (73%), Gaps = 22/580 (3%)
Query: 19 LPVPGKRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNALYICGTDEYGTA 78
LP G+RNILITSALPYVNNVPHLGNIIGCVLSADV+ARYCRL+ YN +YICGTDEYGTA
Sbjct: 10 LPKDGERNILITSALPYVNNVPHLGNIIGCVLSADVYARYCRLKNYNCIYICGTDEYGTA 69
Query: 79 TETKAMEENCTTQQICDKYYAIHKAVYNWFNISFDEFGRTSTPQQTEICQAIFKKLLENN 138
TETKA+ E CT ++ICDKY+ IHK +Y WFNISFD+FGRTST QTEI Q IF K+ +N
Sbjct: 70 TETKALSEGCTPKEICDKYHEIHKEIYEWFNISFDKFGRTSTNSQTEIAQDIFNKIKDNG 129
Query: 139 WLSEYTTQQLYCD-TCKRFLADRLVEGSCPTLGCNYDSARGDQCEKCGKLLNPTELKDPR 197
+ +QLYC+ TCK FLADR VEG+CP C ++ ARGDQC+ C KLLNPTEL +PR
Sbjct: 130 YTLTQEIEQLYCEQTCKMFLADRFVEGTCPH--CKFEDARGDQCDGCSKLLNPTELINPR 187
Query: 198 CKVCQATPKIRDTDHLFLELPLIKDKLEEYINKMSVSGSWSQNAIQGTYAWLKDGLKPRC 257
CKVC P I+ T H+F++LP ++ ++++++ S G+WS+N+I T W+K LKPRC
Sbjct: 188 CKVCSKPPVIKSTKHIFIDLPQLQQQVDQFVETNSKGGNWSENSIAITNTWVKGELKPRC 247
Query: 258 ITRDLKWGVPVPHEKFKDKVFYVWFDAPIGYISITSCYTPDWEEWWKNPENVALYQFMGK 317
ITRDLKWG PVP E+FKDKVFYVWFDAPIGYISIT+ YT +WE+WWKNPENV L QFMGK
Sbjct: 248 ITRDLKWGTPVPMEEFKDKVFYVWFDAPIGYISITAEYTNEWEKWWKNPENVKLVQFMGK 307
Query: 318 DNAPFHTVMFPSTLLGTEENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGNDVKDTNIPA 377
DN PFHTV+FP++L+G+++N+TL+ +S TE+LNYE GKFSKS+ GVFG+ K T IP+
Sbjct: 308 DNVPFHTVIFPASLIGSKDNYTLLNNLSTTEFLNYETGKFSKSRNTGVFGDGAKATGIPS 367
Query: 378 EVWRYYLITNRPEVSDTLFTWEDFQAKLNTELLNNLGNFVNRVLSFIAKPPGRGYGSIIP 437
EVWR+YL+ NRPE SD++F+W+DF K N ELLNN GN VNRVL + + ++P
Sbjct: 368 EVWRFYLLNNRPESSDSIFSWDDFNFK-NNELLNNFGNLVNRVLKMLNT--NAAFNGVVP 424
Query: 438 DSPKADLHPSTKMLAEKISNHIDQYIEAMEKVKLKQGLRIGMSISSEGNAYLQESQFWKL 497
+L+ K L +++ H+ QY + +E++ LK+GL+I MSIS GN Y+Q+++ W L
Sbjct: 425 KI--GELNEVDKKLVQEVDEHLVQYFQKLEEISLKEGLKIAMSISKLGNTYMQDNKPWDL 482
Query: 498 YNEDQGSCSIVIRTSVGLVYLLACLLEPFMPSFSLEVLKQLNVPTETKFSLS-DENGDLE 556
+D C V+ + L+ LL+ LLEP++PS + +V +QLNV TK+S D N
Sbjct: 483 SGKDNERCGQVLAILINLIKLLSTLLEPYIPSLTDKVHQQLNV-EPTKYSTHFDINA--- 538
Query: 557 RARKPWEILPAGHRIGMSS-PLFKELKDEDVRFFREKFAG 595
+PAGH I PL K+++ +D++ +R KF+G
Sbjct: 539 --------IPAGHEISKEILPLVKKIEADDLKKWRTKFSG 570
>sp|Q68FL6|SYMC_MOUSE Methionine--tRNA ligase, cytoplasmic OS=Mus musculus GN=Mars PE=2
SV=1
Length = 902
Score = 664 bits (1713), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/604 (52%), Positives = 418/604 (69%), Gaps = 24/604 (3%)
Query: 19 LPVPGKRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNALYICGTDEYGTA 78
LPVPG+RN+LITSALPYVNNVPHLGNIIGCVLSADVFARYCRLR +N LY+CGTDEYGTA
Sbjct: 260 LPVPGERNVLITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRQWNTLYLCGTDEYGTA 319
Query: 79 TETKAMEENCTTQQICDKYYAIHKAVYNWFNISFDEFGRTSTPQQTEICQAIFKKLLENN 138
TETKAMEE T ++ICDKY+AIH +Y WF ISFD FGRT+TPQQT+I Q IF++LL
Sbjct: 320 TETKAMEEGLTPREICDKYHAIHADIYRWFGISFDTFGRTTTPQQTKITQDIFQRLLTRG 379
Query: 139 WLSEYTTQQLYCDTCKRFLADRLVEGSCPTLGCNYDSARGDQCEKCGKLLNPTELKDPRC 198
++ T +QL C+ C RFLADR VEG CP C Y+ ARGDQC++CGKL+N ELK P+C
Sbjct: 380 FVLRDTVEQLRCERCARFLADRFVEGVCPF--CGYEEARGDQCDRCGKLINAIELKKPQC 437
Query: 199 KVCQATPKIRDTDHLFLELPLIKDKLEEYINKMSVSGSWSQNAIQGTYAWLKDGLKPRCI 258
K+C++ P +R + HLFL+LP ++ +LE+++ K W+ NA +WL+DGLKPRCI
Sbjct: 438 KICRSCPVVRSSQHLFLDLPKLEKRLEDWLGKTVPGSDWTPNARFIIRSWLRDGLKPRCI 497
Query: 259 TRDLKWGVPVPHEKFKDKVFYVWFDAPIGYISITSCYTPDWEEWWKNPENVALYQFMGKD 318
TRDLKWG PVP E F+DKVFYVWFDA IGY+SIT+ YT WE+WWKNPE V LYQFM KD
Sbjct: 498 TRDLKWGTPVPLEGFEDKVFYVWFDATIGYVSITANYTDQWEKWWKNPEQVDLYQFMAKD 557
Query: 319 NAPFHTVMFPSTLLGTEENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGNDVKDTNIPAE 378
N PFH ++FP ++LG E+N+TL+K I TEYLNYE GKFSKS+G+GVFG+ KDT IPA+
Sbjct: 558 NVPFHGLVFPCSVLGAEDNYTLVKHIIATEYLNYEDGKFSKSRGIGVFGDMAKDTGIPAD 617
Query: 379 VWRYYLITNRPEVSDTLFTWEDFQAKLNTELLNNLGNFVNRVLSFIAKPPGRGYGSIIPD 438
+WR+YL+ RPE D+ F+W D K N+ELLNNLGNF+NR F++K +G +P+
Sbjct: 618 IWRFYLLYIRPEGQDSAFSWTDLLIKNNSELLNNLGNFINRAGMFVSK----FFGGCVPE 673
Query: 439 SPKADLHPSTKMLAEKISNHIDQYIEAMEKVKLKQGLRIGMSISSEGNAYLQESQFWKLY 498
L P + L +S + Y + +EKV+++ LR ++IS GN Y+Q ++ WK
Sbjct: 674 ---MALTPDDRRLVAHVSWELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWKRI 730
Query: 499 N---EDQGSCSIVIRTSVGLVYLLACLLEPFMPSFSLEVLKQLNVPTETKFSLSDENGDL 555
D+ V +V + LL+ +L+P+MP+ S + QL +P L
Sbjct: 731 KGGEMDRQRAGTVTGMAVNMAALLSVMLQPYMPTVSSTIQTQLQLPPAACRIL------- 783
Query: 556 ERARKPWEILPAGHRIGMSSPLFKELKDEDVRFFREKFAGSQAD---RAVQAEAEAKRLA 612
A LPAGHRIG SPLF++L+++ + R++F G QA + EA +
Sbjct: 784 --ATSFICTLPAGHRIGTVSPLFQKLENDQIENLRQRFGGGQAKGSPKPAAVEAVTAAGS 841
Query: 613 EHLK 616
+H++
Sbjct: 842 QHIQ 845
>sp|Q6PF21|SYMC_XENLA Methionine--tRNA ligase, cytoplasmic OS=Xenopus laevis GN=mars PE=2
SV=1
Length = 905
Score = 663 bits (1711), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/591 (53%), Positives = 417/591 (70%), Gaps = 24/591 (4%)
Query: 11 ERNHRVAKLPVPGKRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNALYIC 70
+R H + LPV G++N+LITSALPYVNNVPHLGNIIG VLSADVFARYCRLR +N LYIC
Sbjct: 250 QRPHPI--LPVEGEKNVLITSALPYVNNVPHLGNIIGSVLSADVFARYCRLRNWNTLYIC 307
Query: 71 GTDEYGTATETKAMEENCTTQQICDKYYAIHKAVYNWFNISFDEFGRTSTPQQTEICQAI 130
GTDEYGTATETKAMEE T QQICDKY AIH A+Y WFNISFD FGRT+T QT I Q I
Sbjct: 308 GTDEYGTATETKAMEEGLTPQQICDKYNAIHTAIYQWFNISFDYFGRTTTQHQTTISQDI 367
Query: 131 FKKLLENNWLSEYTTQQLYCDTCKRFLADRLVEGSCPTLGCNYDSARGDQCEKCGKLLNP 190
F +LLE +L T +QL C+ C+RFLADR VEG CP CNY+ ARGDQC+KCGKL+N
Sbjct: 368 FHRLLEREFLLTDTVEQLRCEKCQRFLADRFVEGICPF--CNYEEARGDQCDKCGKLINA 425
Query: 191 TELKDPRCKVCQATPKIRDTDHLFLELPLIKDKLEEYINKMSVSGSWSQNAIQGTYAWLK 250
ELK P+CK+C+ +P I+ + HLFL+LP ++ +LE+++ + +G W+ NA T +W++
Sbjct: 426 VELKKPQCKICKQSPVIKSSKHLFLDLPKLEKRLEQWLEQSFSTGDWTSNARFITRSWIR 485
Query: 251 DGLKPRCITRDLKWGVPVPHEKFKDKVFYVWFDAPIGYISITSCYTPDWEEWWKNPENVA 310
DGLKPRCITRDLKWG PVP + F+DKVFYVWFDAPIGYISIT+ YT WE+WWK+P+ V
Sbjct: 486 DGLKPRCITRDLKWGTPVPLDGFRDKVFYVWFDAPIGYISITANYTDQWEKWWKSPQQVQ 545
Query: 311 LYQFMGKDNAPFHTVMFPSTLLGTEENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGNDV 370
LY FM KDN PFH+V+FPS LLG E+N+TL+ + TEYLNYE GKFSKS+GVGVFG+
Sbjct: 546 LYNFMAKDNVPFHSVVFPSCLLGAEDNYTLVNHLVATEYLNYEDGKFSKSRGVGVFGDMA 605
Query: 371 KDTNIPAEVWRYYLITNRPEVSDTLFTWEDFQAKLNTELLNNLGNFVNRVLSFIAKPPGR 430
KDT IPA++WR+YL+ RPE D+ F+W D K N+ELLNNLGNFVNR F+ K
Sbjct: 606 KDTGIPADIWRFYLLYVRPEGQDSAFSWSDLMLKNNSELLNNLGNFVNRAGMFVQK---- 661
Query: 431 GYGSIIPDSPKADLHPSTKMLAEKISNHIDQYIEAMEKVKLKQGLRIGMSISSEGNAYLQ 490
+ +P+ +L K L +++ + QY +EKV+++ LR ++IS GN Y+Q
Sbjct: 662 FFNGCVPE---MELLSEDKRLLAQVAAELQQYNLLLEKVRIRDALRCILNISRHGNQYIQ 718
Query: 491 ESQFWKLY---NEDQGSCSIVIRTSVGLVYLLACLLEPFMPSFSLEVLKQLNVPTETKFS 547
++ WK ++Q V +V + LL+ +L P+MP+ S + +QL +P E+K
Sbjct: 719 VNEPWKCIKGNQQEQKRAGTVTGVAVNMAALLSIMLHPYMPTISSVIQEQLLMPQESKVL 778
Query: 548 LSDENGDLERARKPWEILPAGHRIGMSSPLFKELKDEDVRFFREKFAGSQA 598
+D L+ +GH+IG SPLF++L+++ + R++F G Q
Sbjct: 779 TTDFCCCLQ----------SGHQIGNVSPLFQKLENDQIESLRKRFGGGQV 819
>sp|Q2T9L8|SYMC_BOVIN Methionine--tRNA ligase, cytoplasmic OS=Bos taurus GN=MARS PE=2
SV=1
Length = 898
Score = 654 bits (1686), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/597 (52%), Positives = 412/597 (69%), Gaps = 33/597 (5%)
Query: 19 LPVPGKRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNALYICGTDEYGTA 78
LPV G+RN+LITSALPYVNNVPHLGNIIGCVLSADVFARY RLR +N LY+CGTDEYGTA
Sbjct: 258 LPVAGERNVLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTA 317
Query: 79 TETKAMEENCTTQQICDKYYAIHKAVYNWFNISFDEFGRTSTPQQTEICQAIFKKLLENN 138
TETKAMEE T Q+ICDKY+ IH +Y WFNISFD FGRT+TPQQT+I Q IF++LL
Sbjct: 318 TETKAMEEGLTPQEICDKYHVIHADIYRWFNISFDFFGRTTTPQQTKITQDIFQRLLARG 377
Query: 139 WLSEYTTQQLYCDTCKRFLADRLVEGSCPTLGCNYDSARGDQCEKCGKLLNPTELKDPRC 198
++ + T +QL C+ C RFLADR VEG CP C Y+ ARGDQC+KCGKL+N ELK P+C
Sbjct: 378 FVLQDTVEQLRCEHCARFLADRFVEGVCPF--CGYEEARGDQCDKCGKLINAIELKKPQC 435
Query: 199 KVCQATPKIRDTDHLFLELPLIKDKLEEYINKMSVSGSWSQNAIQGTYAWLKDGLKPRCI 258
KVC++ P ++ + HLFL+LP + ++EE++ K W+ NA +WL+DGLKPRCI
Sbjct: 436 KVCRSCPVVKSSQHLFLDLPKLAARVEEWLEKTLPGSDWTANARFIIRSWLRDGLKPRCI 495
Query: 259 TRDLKWGVPVPHEKFKDKVFYVWFDAPIGYISITSCYTPDWEEWWKNPENVALYQFMGKD 318
TRDLKWG PVP E F+DKVFYVWFDA IGY+SIT+ YT WE+WWKNPE V LYQFM KD
Sbjct: 496 TRDLKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWEKWWKNPEQVNLYQFMAKD 555
Query: 319 NAPFHTVMFPSTLLGTEENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGNDVKDTNIPAE 378
N PFH ++FPS+ LG E+N+TL+ + TEYLNYE GKFSKS+GVGVFG+ +DT IPA+
Sbjct: 556 NVPFHGIVFPSSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVFGDMAQDTGIPAD 615
Query: 379 VWRYYLITNRPEVSDTLFTWEDFQAKLNTELLNNLGNFVNRVLSFIAKPPGRGYGSIIPD 438
+WR+YL+ NRPE D+ F+W D K N+ELLNNLGNF+NR F++K +G +P+
Sbjct: 616 IWRFYLLYNRPEGQDSAFSWTDMLFKNNSELLNNLGNFINRAGMFVSK----FFGGFVPE 671
Query: 439 SPKADLHPSTKMLAEKISNHIDQYIEAMEKVKLKQGLRIGMSISSEGNAYLQESQFWKLY 498
L + L I+ + Y + +EKV+++ LR ++IS GN Y+Q ++ WK
Sbjct: 672 ---MVLTSDDQRLLTHITLELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWKRI 728
Query: 499 N---EDQGSCSIVIRTSVGLVYLLACLLEPFMPSFSLEVLKQLNVP------TETKFSLS 549
D+ V +V + LL+ +L+P+MP+ S + QL +P T F +
Sbjct: 729 KGGEADRQRAGTVTGLAVNIAALLSVMLQPYMPTVSATIQAQLQLPPPACSILPTNFLCT 788
Query: 550 DENGDLERARKPWEILPAGHRIGMSSPLFKELKDEDVRFFREKFAGSQADRAVQAEA 606
LPAGH+IG SPLF++L+++ + +++F+G QA + + A
Sbjct: 789 ---------------LPAGHQIGTVSPLFQKLENDQIESLKQRFSGGQAKASPKTAA 830
>sp|P56192|SYMC_HUMAN Methionine--tRNA ligase, cytoplasmic OS=Homo sapiens GN=MARS PE=1
SV=2
Length = 900
Score = 652 bits (1681), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/589 (53%), Positives = 410/589 (69%), Gaps = 33/589 (5%)
Query: 19 LPVPGKRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNALYICGTDEYGTA 78
LPV G+RN+LITSALPYVNNVPHLGNIIGCVLSADVFARY RLR +N LY+CGTDEYGTA
Sbjct: 258 LPVAGERNVLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYGTA 317
Query: 79 TETKAMEENCTTQQICDKYYAIHKAVYNWFNISFDEFGRTSTPQQTEICQAIFKKLLENN 138
TETKA+EE T Q+ICDKY+ IH +Y WFNISFD FGRT+TPQQT+I Q IF++LL+
Sbjct: 318 TETKALEEGLTPQEICDKYHIIHADIYRWFNISFDIFGRTTTPQQTKITQDIFQQLLKRG 377
Query: 139 WLSEYTTQQLYCDTCKRFLADRLVEGSCPTLGCNYDSARGDQCEKCGKLLNPTELKDPRC 198
++ + T +QL C+ C RFLADR VEG CP C Y+ ARGDQC+KCGKL+N ELK P+C
Sbjct: 378 FVLQDTVEQLRCEHCARFLADRFVEGVCPF--CGYEEARGDQCDKCGKLINAVELKKPQC 435
Query: 199 KVCQATPKIRDTDHLFLELPLIKDKLEEYINKMSVSGSWSQNAIQGTYAWLKDGLKPRCI 258
KVC++ P ++ + HLFL+LP ++ +LEE++ + W+ NA T +WL+DGLKPRCI
Sbjct: 436 KVCRSCPVVQSSQHLFLDLPKLEKRLEEWLGRTLPGSDWTPNAQFITRSWLRDGLKPRCI 495
Query: 259 TRDLKWGVPVPHEKFKDKVFYVWFDAPIGYISITSCYTPDWEEWWKNPENVALYQFMGKD 318
TRDLKWG PVP E F+DKVFYVWFDA IGY+SIT+ YT WE WWKNPE V LYQFM KD
Sbjct: 496 TRDLKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWERWWKNPEQVDLYQFMAKD 555
Query: 319 NAPFHTVMFPSTLLGTEENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGNDVKDTNIPAE 378
N PFH+++FP + LG E+N+TL+ + TEYLNYE GKFSKS+GVGVFG+ +DT IPA+
Sbjct: 556 NVPFHSLVFPCSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVFGDMAQDTGIPAD 615
Query: 379 VWRYYLITNRPEVSDTLFTWEDFQAKLNTELLNNLGNFVNRVLSFIAKPPGRGYGSIIPD 438
+WR+YL+ RPE D+ F+W D K N+ELLNNLGNF+NR F++K G GY
Sbjct: 616 IWRFYLLYIRPEGQDSAFSWTDLLLKNNSELLNNLGNFINRAGMFVSKFFG-GY------ 668
Query: 439 SPKADLHPSTKMLAEKISNHIDQYIEAMEKVKLKQGLRIGMSISSEGNAYLQESQFWKLY 498
P+ L P + L ++ + Y + +EKV+++ LR ++IS GN Y+Q ++ WK
Sbjct: 669 VPEMVLTPDDQRLLAHVTLELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWKRI 728
Query: 499 N---EDQGSCSIVIRTSVGLVYLLACLLEPFMPSFSLEVLKQLNVPTE------TKFSLS 549
D+ V +V + LL+ +L+P+MP+ S + QL +P T F +
Sbjct: 729 KGSEADRQRAGTVTGLAVNIAALLSVMLQPYMPTVSATIQAQLQLPPPACSILLTNFLCT 788
Query: 550 DENGDLERARKPWEILPAGHRIGMSSPLFKELKDEDVRFFREKFAGSQA 598
LPAGH+IG SPLF++L+++ + R++F G QA
Sbjct: 789 ---------------LPAGHQIGTVSPLFQKLENDQIESLRQRFGGGQA 822
>sp|P00958|SYMC_YEAST Methionine--tRNA ligase, cytoplasmic OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=MES1 PE=1 SV=4
Length = 751
Score = 630 bits (1624), Expect = e-179, Method: Compositional matrix adjust.
Identities = 302/586 (51%), Positives = 403/586 (68%), Gaps = 30/586 (5%)
Query: 19 LPVPGKRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNALYICGTDEYGTA 78
LP P +RNILITSALPYVNNVPHLGNIIG VLSAD+FARYC+ R YNAL+ICGTDEYGTA
Sbjct: 190 LPKPNERNILITSALPYVNNVPHLGNIIGSVLSADIFARYCKGRNYNALFICGTDEYGTA 249
Query: 79 TETKAMEENCTTQQICDKYYAIHKAVYNWFNISFDEFGRTSTPQQTEICQAIFKKLLENN 138
TETKA+EE T +Q+CDKY+ IH VY WF I FD FGRT+T +QTEI Q IF KL N
Sbjct: 250 TETKALEEGVTPRQLCDKYHKIHSDVYKWFQIGFDYFGRTTTDKQTEIAQHIFTKLNSNG 309
Query: 139 WLSEYTTQQLYCDTCKRFLADRLVEGSCPTLGCNYDSARGDQCEKCGKLLNPTELKDPRC 198
+L E + +QLYC +LADR VEG CP C+YD ARGDQC+KCG LL+P EL +PRC
Sbjct: 310 YLEEQSMKQLYCPVHNSYLADRYVEGECPK--CHYDDARGDQCDKCGALLDPFELINPRC 367
Query: 199 KVCQATPKIRDTDHLFLELPLIKDKLEEYINKMSVSGSWSQNAIQGTYAWLKDGLKPRCI 258
K+ A+P+ + +DH+FL L ++ ++ E++ K S G+WS+N+ T +WLKDGLKPRCI
Sbjct: 368 KLDDASPEPKYSDHIFLSLDKLESQISEWVEKASEEGNWSKNSKTITQSWLKDGLKPRCI 427
Query: 259 TRDLKWGVPVPHEKFKDKVFYVWFDAPIGYISITSCYTPDWEEWWKNPENVALYQFMGKD 318
TRDL WG PVP EK+KDKV YVWFDA IGY+SITS YT +W++WW NPE+V+LYQFMGKD
Sbjct: 428 TRDLVWGTPVPLEKYKDKVLYVWFDATIGYVSITSNYTKEWKQWWNNPEHVSLYQFMGKD 487
Query: 319 NAPFHTVMFPSTLLGTEENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGNDVKDTNIPAE 378
N PFHTV+FP + LGTEENWT++ ++ TEYL YE GKFSKS+GVGVFGN+ +D+ I
Sbjct: 488 NVPFHTVVFPGSQLGTEENWTMLHHLNTTEYLQYENGKFSKSRGVGVFGNNAQDSGISPS 547
Query: 379 VWRYYLITNRPEVSDTLFTWEDFQAKLNTELLNNLGNFVNRVLSFIAKPPGRGYGSIIP- 437
VWRYYL + RPE SD+ F+W+DF A+ N+ELL NLGNFVNR++ F+ Y ++P
Sbjct: 548 VWRYYLASVRPESSDSHFSWDDFVARNNSELLANLGNFVNRLIKFV----NAKYNGVVPK 603
Query: 438 -DSPKADLHPSTKMLAEKISNHIDQYIEAMEKVKLKQGLRIGMSISSEGNAYLQESQFWK 496
D K + L + I+ + Y++ ME ++GL I MS+S+ GN +LQE++
Sbjct: 604 FDPKKVSNYDG---LVKDINEILSNYVKEMELGHERRGLEIAMSLSARGNQFLQENKLDN 660
Query: 497 -LYNEDQGSCSIVIRTSVGLVYLLACLLEPFMPSFSLEVLKQLNVPT---ETKFSLSDEN 552
L+++ V+ + ++Y ++ ++ P+MP ++ K LN P + +F L+
Sbjct: 661 TLFSQSPEKSDAVVAVGLNIIYAVSSIITPYMPEIGEKINKMLNAPALKIDDRFHLA--- 717
Query: 553 GDLERARKPWEILPAGHRIGMSSPLFKELKDEDVRFFREKFAGSQA 598
+ GH I + LF+ + ++ + +R K+ G Q
Sbjct: 718 ------------ILEGHNINKAEYLFQRIDEKKIDEWRAKYGGQQV 751
>sp|Q9UUF2|SYMC_SCHPO Probable methionine--tRNA ligase, cytoplasmic
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=rar1 PE=3 SV=1
Length = 782
Score = 629 bits (1622), Expect = e-179, Method: Compositional matrix adjust.
Identities = 308/586 (52%), Positives = 400/586 (68%), Gaps = 24/586 (4%)
Query: 19 LPVPGKRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNALYICGTDEYGTA 78
LP +RNILITSALPYVNNVPHLGNI+G LSADVFARY R R +N LYICGTDEYGTA
Sbjct: 216 LPKSNERNILITSALPYVNNVPHLGNIVGSTLSADVFARYHRARNHNTLYICGTDEYGTA 275
Query: 79 TETKAMEENCTTQQICDKYYAIHKAVYNWFNISFDEFGRTSTPQQTEICQAIFKKLLENN 138
TETKA+EE + +++CDKY+A+HK VY+WF I FD FGRT+TP+QT I Q IF KL N+
Sbjct: 276 TETKALEEGVSPKELCDKYHALHKEVYDWFEIDFDHFGRTTTPKQTGIAQHIFTKLYNND 335
Query: 139 WLSEYTTQQLYCDTCKRFLADRLVEGSCPTLGCNYDSARGDQCEKCGKLLNPTELKDPRC 198
+++ T QLYC+ + +LADR VEG+CP C YD ARGDQC+ CG LLN EL DP+C
Sbjct: 336 YMAIDTMTQLYCEVHQGYLADRYVEGTCPK--CGYDDARGDQCDGCGGLLNAFELIDPKC 393
Query: 199 KVCQATPKIRDTDHLFLELPLIKDKLEEYINKMSVSGSWSQNAIQGTYAWLKDGLKPRCI 258
K+ +ATP R+T H+FL L ++ +E + + +V G WS N T +WLK+GL+PRCI
Sbjct: 394 KLDRATPVKRETKHVFLSLDKLQPAVESWAMQSAVEGKWSNNGRSITESWLKEGLRPRCI 453
Query: 259 TRDLKWGVPVPHEKFKDKVFYVWFDAPIGYISITSCYTPDWEEWWKNPENVALYQFMGKD 318
TRDLKWG PVP E+FK KV YVWFDA IGYISIT+ YT +WE+WW+NPE V LYQFMGKD
Sbjct: 454 TRDLKWGTPVPLEEFKGKVLYVWFDATIGYISITANYTDEWEKWWRNPEQVKLYQFMGKD 513
Query: 319 NAPFHTVMFPSTLLGTEENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGNDVKDTNIPAE 378
N PFHTV+FPS+LLGT E WT++ I+ T+YLNYE GKFSKS+GVGVFGN +D +
Sbjct: 514 NVPFHTVIFPSSLLGTGEKWTMLHHINTTDYLNYETGKFSKSRGVGVFGNTAQDIGLSPS 573
Query: 379 VWRYYLITNRPEVSDTLFTWEDFQAKLNTELLNNLGNFVNRVLSFIAKPPGRGYGSIIPD 438
VWRYYL+++RPE SDT+FTW++F + N+ELL NLGNFVNR L F Y ++P
Sbjct: 574 VWRYYLLSSRPETSDTMFTWKEFITRHNSELLANLGNFVNRTLKFTTAK----YNGLVPH 629
Query: 439 ---SPKADLHPSTKMLAEKISNHIDQYIEAMEKVKLKQGLRIGMSISSEGNAYLQESQF- 494
P + ++ + +Y A+E KL++GLR+ M IS+ GN YLQ+++
Sbjct: 630 YLTDPSVGAGKLKADFVKDVNALLAKYNAALEASKLREGLRLAMEISARGNQYLQDNRID 689
Query: 495 WKLYNEDQGSCSIVIRTSVGLVYLLACLLEPFMPSFSLEVLKQLNVPTETKFSLSDENGD 554
K Y ++ C+ I ++ L+YLLA + P+MPS S + KQLN P ++ D
Sbjct: 690 NKCYLYERQKCADAIGYALNLIYLLAAIFYPYMPSTSTSIYKQLNAPAA---AIPDT--- 743
Query: 555 LERARKPWEI-LPAGHRIGMSSPLFKELKDEDVRFFREKFAGSQAD 599
WE+ L GHRIG LF + + +R K+ G+ ++
Sbjct: 744 -------WELCLLPGHRIGEPEYLFTRIDESMEEEWRSKYGGNGSN 782
>sp|Q20970|SYMC_CAEEL Methionine--tRNA ligase, cytoplasmic OS=Caenorhabditis elegans
GN=mrs-1 PE=2 SV=1
Length = 917
Score = 624 bits (1608), Expect = e-178, Method: Compositional matrix adjust.
Identities = 301/613 (49%), Positives = 403/613 (65%), Gaps = 35/613 (5%)
Query: 19 LPVPGKRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNALYICGTDEYGTA 78
LP PGKRNILIT+ALPYVNNVPHLGNIIGCVLSADVFARYC LRG+ Y+ GTDEYGTA
Sbjct: 29 LPQPGKRNILITAALPYVNNVPHLGNIIGCVLSADVFARYCNLRGHQTFYVGGTDEYGTA 88
Query: 79 TETKAMEENCTTQQICDKYYAIHKAVYNWFNISFDEFGRTSTPQQTEICQAIFKKLLENN 138
TETKA++E CT +++CDKY+AIHK +Y WF I F FGRT+T QTEICQ +F KL +N
Sbjct: 89 TETKALQEGCTPRELCDKYHAIHKGIYEWFGIDFSHFGRTTTDHQTEICQDMFLKLHKNG 148
Query: 139 WLSEYTTQQLYCDTCKRFLADRLVEGSCPTLGCNYDSARGDQCEKCGKLLNPTELKDPRC 198
+ S + QLYC+ C++FLADR V G+CP C YD ARGDQC+ CGKL+N +LKD +C
Sbjct: 149 YTSSQSVDQLYCNQCEKFLADRFVTGTCPM--CAYDDARGDQCDGCGKLINAVDLKDAKC 206
Query: 199 KVCQATPKIRDTDHLFLELPLIKDKLEEYINK--MSVSGSWSQNAIQGTYAWLKDGLKPR 256
+C+ATP+++ + H+FL L ++ K E++++ WS NA+ T AW+K GL PR
Sbjct: 207 HMCKATPEVKQSTHIFLSLDKLQQKTTEHLDRELAKEDNRWSSNAVGITKAWMKLGLDPR 266
Query: 257 CITRDLKWGVPVPHEKFKDKVFYVWFDAPIGYISITSCYTPD-WEEWWKNPENVALYQFM 315
CITRDLKWG VP + F+ KVFYVWFDAPIGY+SIT C D W +WWKNPENV L+ F+
Sbjct: 267 CITRDLKWGTAVPLDGFEKKVFYVWFDAPIGYLSITKCVLGDNWTKWWKNPENVELFNFV 326
Query: 316 GKDNAPFHTVMFPSTLLGTEENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGNDVKDTNI 375
GKDN FH VMFP + LG +N+T++ + TEYLNYE KFSKS+G G+FG+ + T I
Sbjct: 327 GKDNVAFHAVMFPCSQLGANDNYTVVNNLCATEYLNYEDTKFSKSRGTGIFGDAAQGTEI 386
Query: 376 PAEVWRYYLITNRPEVSDTLFTWEDFQAKLNTELLNNLGNFVNRVLSFIAKPPGRGYGSI 435
PA++WR+YL+ RPE DT F+W+DF K+N+ELLNNLGNF+NR LSF+A +G +
Sbjct: 387 PADIWRFYLLYMRPESQDTAFSWDDFVLKVNSELLNNLGNFINRALSFVA----NSFGGV 442
Query: 436 IPDSPKADLHPSTKMLAEKISNHIDQYIEAMEKVKLKQGLRIGMSISSEGNAYLQESQFW 495
+P+ +L + +I N Q+ + + V LK ++ +++S GN Y+Q W
Sbjct: 443 VPE---MNLTNDDAEVLSEIHNECMQWDKQFDGVHLKDAVKTILNVSRLGNQYMQAQTPW 499
Query: 496 KLYNEDQGS---CSIVIRTSVGLVYLLACLLEPFMPSFSLEVLKQLNVPTETKFSLSDEN 552
L +D+ +I + + Y ++ LL P MP+ S + +Q +P F+
Sbjct: 500 VLMKKDEEGKKRAGTIIGVAANIAYHVSVLLYPIMPTISATIREQCGLPALPLFT----- 554
Query: 553 GDLERARKPWEI--LPAGHRIGMSSPLFKELKDEDVRFFREKFAGSQADRAVQAEAEAKR 610
P+ I L AGH+IG SPLF++L + F+ KF GSQ A++ A +
Sbjct: 555 --------PFPICYLKAGHKIGQPSPLFQKLDPAQIAEFKAKFGGSQ-----DAQSSAPK 601
Query: 611 LAEHLKKTKISVP 623
AE K+ K P
Sbjct: 602 TAEKPKQQKKQAP 614
>sp|Q73NT9|SYM_TREDE Methionine--tRNA ligase OS=Treponema denticola (strain ATCC 35405 /
CIP 103919 / DSM 14222) GN=metG PE=3 SV=1
Length = 793
Score = 585 bits (1509), Expect = e-166, Method: Compositional matrix adjust.
Identities = 293/593 (49%), Positives = 396/593 (66%), Gaps = 32/593 (5%)
Query: 28 LITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNALYICGTDEYGTATETKAMEEN 87
L+TSALPYVNN PHLGN+I VLSADVFAR+CRL+ Y LYICGTDEYGTATETKA+EE
Sbjct: 5 LVTSALPYVNNFPHLGNLIQ-VLSADVFARFCRLKEYETLYICGTDEYGTATETKALEEK 63
Query: 88 CTTQQICDKYYAIHKAVYNWFNISFDEFGRTSTPQQTEICQAIFKKLLENNWLSEYTTQQ 147
+ +++C Y+AIH +YNWFNI+FD FGRTSTPQQTEI Q IF L +N +++E+T +Q
Sbjct: 64 KSPEELCSFYHAIHAEIYNWFNIAFDYFGRTSTPQQTEITQGIFNDLDKNGYITEHTIEQ 123
Query: 148 LYCDTCKRFLADRLVEGSCPTLGCNYDSARGDQCEKCGKLLNPTELKDPRCKVCQATPKI 207
LYC +CKRFLADR V G+CP+ C+YD ARGDQCE CGKLL+PT+LK+PRC C A P++
Sbjct: 124 LYCPSCKRFLADRYVLGTCPS--CSYDGARGDQCEHCGKLLDPTDLKEPRCSSCGAAPEV 181
Query: 208 RDTDHLFLELPLIKDKLEEYINKMSVSGSWSQNAIQGTYAWLKDGLKPRCITRDLKWGVP 267
R T HL++ LP I + E+++ K + G WS NA+Q + +WL+DGL+ R ITRDLKWG+P
Sbjct: 182 RSTTHLYINLPKIVPEYEKWMPKTAEEGRWSNNALQMSKSWLRDGLQERAITRDLKWGIP 241
Query: 268 VPHEKFKDKVFYVWFDAPIGYISITSCYT----PDWEEWWKNPENVALYQFMGKDNAPFH 323
VP + F+DKVFYVWFDAPIGYISIT C+ DW+ WW + +V L+QF+GKDN PFH
Sbjct: 242 VPKKGFEDKVFYVWFDAPIGYISITKCWADLAGKDWKAWWLDQNDVELFQFIGKDNIPFH 301
Query: 324 TVMFPSTLLGTEENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGNDVKDTNIPAEVWRYY 383
TV+FP +L+G+ +NWT + +S TEYLNYE GKFSKSKGVGVFGND K++ IPA++WR+Y
Sbjct: 302 TVIFPCSLIGSGKNWTKLFHMSGTEYLNYENGKFSKSKGVGVFGNDAKESGIPADMWRFY 361
Query: 384 LITNRPEVSDTLFTWEDFQAKLNTELLNNLGNFVNRVLSFIAKPPGRGYGSIIPD----- 438
+ NRPE +DT FTW+DFQ ++N+EL+ NL N VNR +FI R Y IP
Sbjct: 362 IFYNRPEKNDTQFTWKDFQERVNSELIGNLCNLVNRTATFIH----RYYDGKIPQVDGAK 417
Query: 439 SPKADLHPSTKMLAEKISNHIDQYIEAMEKVKLKQGLRIGMSISSEGNAYLQESQFWKLY 498
S + D+ K L E S + E + +L+ ++SS N Q+ + WK
Sbjct: 418 SGREDIKSMVKSLREAASASFKKITELSDWAELRDSFHEAFALSSVANKAFQDGEPWKRR 477
Query: 499 NEDQGSCSIVIRTSVGLVYLLACLLEPFMPSFSLEVLKQLNVPTETKFSLSDENGDLERA 558
D ++ L+ + L+ P+MP ++ + + +S + +G +
Sbjct: 478 ETDPEYAEALMSELCYLIKDILILIHPYMPQYADQAAGFFG---QKIWSGNIFDGKAPQF 534
Query: 559 RKP------WEILPAGHRIGMSSP-----LFKELKDEDVRFFREKFAGSQADR 600
KP W+ L G R G+ + +FK L ++ + +RE+++GSQ DR
Sbjct: 535 NKPEGSFLSWKNL--GEREGLKTVENPVIIFKTLDNKVIDAYRERYSGSQKDR 585
>sp|O83776|SYM_TREPA Methionine--tRNA ligase OS=Treponema pallidum (strain Nichols)
GN=metG PE=3 SV=1
Length = 811
Score = 524 bits (1349), Expect = e-147, Method: Compositional matrix adjust.
Identities = 261/613 (42%), Positives = 373/613 (60%), Gaps = 51/613 (8%)
Query: 28 LITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNALYICGTDEYGTATETKAMEEN 87
LIT+ALPYVNNVPHLGN+I LSADVFAR+CR+RGY+ ++CGTDEYGTA+ET+A E+
Sbjct: 5 LITAALPYVNNVPHLGNLIQG-LSADVFARFCRMRGYHTCFVCGTDEYGTASETRAAEQG 63
Query: 88 CTTQQICDKYYAIHKAVYNWFNISFDEFGRTSTPQQTEICQAIFKKLLENNWLSEYTTQQ 147
+ Q+C Y+A+H+ +Y WF++SFD FGRT++ TE+ QA+F+ L ++SE+ + Q
Sbjct: 64 LSPAQLCAHYHALHRDIYQWFDLSFDYFGRTTSDAHTELTQALFRHLDARGFISEHESAQ 123
Query: 148 LYCDTCKRFLADRLVEGSCPTLGCNYDSARGDQCEKCGKLLNPTELKDPRCKVCQATPKI 207
YC C RFLADR + G+CP C AR DQCE CG LL P L + RC C P+
Sbjct: 124 AYCLHCARFLADRYLRGTCPH--CRNAEARADQCEHCGVLLEPETLLNARCVSCGTAPEF 181
Query: 208 RDTDHLFLELPLIKDKLEEYINKMSVSGSWSQNAIQGTYAWLKDGLKPRCITRDLKWGVP 267
R T HL+L LP ++ + + + W++NA++ T WL+ GL+ R ITRDL+WGVP
Sbjct: 182 RPTRHLYLNLPALEKAYRSWF--CTTNHLWTKNAVRMTEGWLRTGLQERAITRDLRWGVP 239
Query: 268 VPHEKFKDKVFYVWFDAPIGYISITSCYTP----------------DWEEWWKNPENVAL 311
VP F+ KVFYVWFDAP+GYISIT C T W+ WW + ++V L
Sbjct: 240 VPKAGFEQKVFYVWFDAPVGYISITKCGTEAASSQEGGGTDDGVKEKWQSWWLDQQDVEL 299
Query: 312 YQFMGKDNAPFHTVMFPSTLLGTEENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGNDVK 371
QF+GKDN PFHT+ FP L+G+ + WT++ +S TEYLNYE GKFSKS GVGVFG+D K
Sbjct: 300 VQFVGKDNIPFHTLFFPCMLIGSGQRWTMLTRLSATEYLNYEGGKFSKSLGVGVFGSDAK 359
Query: 372 DTNIPAEVWRYYLITNRPEVSDTLFTWEDFQAKLNTELLNNLGNFVNRVLSFIAKPPGRG 431
++ IP+++WR+YL+ +RPE SD FTW +FQ ++N+EL+ NL N VNR L+F+A R
Sbjct: 360 ESGIPSDLWRFYLLYHRPEKSDAHFTWHEFQERVNSELIGNLCNLVNRTLTFVA----RT 415
Query: 432 YGSIIP-----DSPKADLHPSTKMLAEKISNHIDQYIEAMEKVKLKQGLRIGMSISSEGN 486
YG ++P S +A + T L E + N + + ME+V+L++ R ++S+ N
Sbjct: 416 YGGVVPAQDGARSTRAQVMEETLALREAVRNTAKRMTDLMEQVQLREAFREVFALSARAN 475
Query: 487 AYLQESQFWKLYNEDQGSCSIVIRTSVGLVYLLACLLEPFMPSFSLEVLKQLNVPTETKF 546
LQ+ WK +D+ ++R ++ + L PF+P ++ + + L V
Sbjct: 476 KALQDGAPWKTRAQDRERADALMRELCYVIRDVLILAHPFLPWYTQQAARFLGVQLS--- 532
Query: 547 SLSDENGDLERARK-------PWEILP------AGHRIGMSSP-----LFKELKDEDVRF 588
S + E G A K P + P G R G++ LF+ L+ E +
Sbjct: 533 SCAPEGGGAVCAAKKDADTAQPDTVQPTLRWSDVGERKGLTQVHPPVILFRPLETETIAA 592
Query: 589 FREKFAGSQADRA 601
+R ++AG+ D A
Sbjct: 593 YRARYAGTARDGA 605
>sp|B2S0T6|SYM_BORHD Methionine--tRNA ligase OS=Borrelia hermsii (strain DAH) GN=metG
PE=3 SV=1
Length = 729
Score = 515 bits (1327), Expect = e-145, Method: Compositional matrix adjust.
Identities = 248/508 (48%), Positives = 337/508 (66%), Gaps = 14/508 (2%)
Query: 24 KRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNALYICGTDEYGTATETKA 83
K+ LIT+ALPYVNN+PHLGN++ VLSAD FARY R+ G LY+CGTDEYGTATETKA
Sbjct: 2 KKKNLITAALPYVNNIPHLGNLVQ-VLSADAFARYSRMMGIETLYVCGTDEYGTATETKA 60
Query: 84 MEENCTTQQICDKYYAIHKAVYNWFNISFDEFGRTSTPQQTEICQAIFKKLLENNWLSEY 143
+ E T +++C+KYY IHK++Y WFNI FD FGRT+ + E Q +F KL +N + +E
Sbjct: 61 LIEKTTPEELCNKYYEIHKSIYEWFNIKFDIFGRTTNKRHKETVQDLFLKLEKNGYTTEK 120
Query: 144 TTQQLYCDTCKRFLADRLVEGSCPTLGCNYDSARGDQCEKCGKLLNPTELKDPRCKVCQA 203
++Q +C + FLADR V G CP G N A+GDQCE C KLL+PT+L +P+C +C+
Sbjct: 121 ESEQFFCKQDQMFLADRYVTGECPNCGNN---AKGDQCENCSKLLSPTDLINPKCIICKN 177
Query: 204 TPKIRDTDHLFLELPLIKDKLEEYINKMSVSGSWSQNAIQGTYAWLKDGLKPRCITRDLK 263
P I+ T H++++LP IKD+L ++ ++ +W+ NAI+ T A+L+DGLK R ITRDLK
Sbjct: 178 IPIIKTTKHIYIDLPKIKDELSHWMQITELNTNWNTNAIKITNAFLRDGLKERAITRDLK 237
Query: 264 WGVPVPHEKFKDKVFYVWFDAPIGYISITSCYTPDWEEWWKNPENVALYQFMGKDNAPFH 323
WG+PVP +++++KVFYVWFDAPIGYISIT + DWE WWKN E L QF+GKDN FH
Sbjct: 238 WGIPVPKKEYENKVFYVWFDAPIGYISITKEISKDWESWWKNNEETNLVQFIGKDNILFH 297
Query: 324 TVMFPSTLLGTEENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGNDVKDTNIPAEVWRYY 383
TV+FPS LG++ENWT++ ++ +EYLNYE KFSKS G G+FGNDV T IP+++WR+Y
Sbjct: 298 TVIFPSIALGSKENWTMLSKLASSEYLNYENLKFSKSAGTGIFGNDVITTGIPSDIWRFY 357
Query: 384 LITNRPEVSDTLFTWEDFQAKLNTELLNNLGNFVNRVLSFIAKPPGRGYGSIIPDSPKAD 443
+ NRPE SD F W+DF ++N+EL+ N N VNRVL+F K G I K D
Sbjct: 358 IYYNRPEKSDFQFMWDDFMERVNSELIGNFSNLVNRVLTFYKKFFGDQIDKI---EIKED 414
Query: 444 LHPSTKMLAEKISNHIDQYIEAMEKVKLKQGLRIGMSISSEGNAYLQESQFWKLYNEDQG 503
+ +K N Q V+LK L+ + IS GN Q+ + WK +
Sbjct: 415 FWQEINLKYDKTLNFFKQ-------VELKSALKEILDISRTGNKIFQDKEPWKTKDSTPQ 467
Query: 504 SCSIVIRTSVGLVYLLACLLEPFMPSFS 531
++ + L+ L+ L+ PF+P S
Sbjct: 468 KTKELLLNLIYLIRDLSILISPFIPHTS 495
>sp|B5RME0|SYM_BORDL Methionine--tRNA ligase OS=Borrelia duttonii (strain Ly) GN=metG
PE=3 SV=1
Length = 726
Score = 514 bits (1324), Expect = e-145, Method: Compositional matrix adjust.
Identities = 246/508 (48%), Positives = 338/508 (66%), Gaps = 14/508 (2%)
Query: 24 KRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNALYICGTDEYGTATETKA 83
K+ LIT+ALPYVNN+PHLGN++ VLSAD FARY R+ G LY+CGTDEYGTATETKA
Sbjct: 2 KKKNLITAALPYVNNIPHLGNLVQ-VLSADAFARYSRMMGIETLYVCGTDEYGTATETKA 60
Query: 84 MEENCTTQQICDKYYAIHKAVYNWFNISFDEFGRTSTPQQTEICQAIFKKLLENNWLSEY 143
+ E T +++C+KY+AIHK++Y WFNI FD FGRT+ E Q +F KL +N +++E
Sbjct: 61 LIEKTTPEELCNKYHAIHKSIYEWFNIKFDIFGRTTNKYHKETVQDLFLKLDKNGYITEK 120
Query: 144 TTQQLYCDTCKRFLADRLVEGSCPTLGCNYDSARGDQCEKCGKLLNPTELKDPRCKVCQA 203
+Q +C K FLADR V G CP G N +GDQCE C LL EL +PRC +C+
Sbjct: 121 ENEQFFCQQDKMFLADRYVTGECPNCGNN---TKGDQCENCSNLLVTNELLNPRCIICKN 177
Query: 204 TPKIRDTDHLFLELPLIKDKLEEYINKMSVSGSWSQNAIQGTYAWLKDGLKPRCITRDLK 263
P I+ T HL+++LP IK++LE +I ++ + +W+ NAI+ T A+L+DGLK R ITRDLK
Sbjct: 178 IPIIKKTKHLYIDLPKIKNELEHWIQQIDQNTNWNTNAIKITNAFLRDGLKERTITRDLK 237
Query: 264 WGVPVPHEKFKDKVFYVWFDAPIGYISITSCYTPDWEEWWKNPENVALYQFMGKDNAPFH 323
WG+PVP +++++KVFYVWFDAPIGYISIT DWE WWKN E+ L QF+GKDN FH
Sbjct: 238 WGIPVPKKEYENKVFYVWFDAPIGYISITKEIIKDWESWWKNNEDTNLIQFIGKDNILFH 297
Query: 324 TVMFPSTLLGTEENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGNDVKDTNIPAEVWRYY 383
T+MFPS LG++ENWT++ ++ +EYLNYE KFSKS G G+FGNDV T IP++VWR+Y
Sbjct: 298 TIMFPSIELGSQENWTMLNKLASSEYLNYENLKFSKSAGTGIFGNDVITTGIPSDVWRFY 357
Query: 384 LITNRPEVSDTLFTWEDFQAKLNTELLNNLGNFVNRVLSFIAKPPGRGYGSIIPDSPKAD 443
+ NRPE +D F W+DF ++N+EL+ N N +NRVL+F K G K D
Sbjct: 358 IYYNRPEKADFQFMWDDFMERINSELIGNFSNLINRVLTFYKKFFG----------DKID 407
Query: 444 LHPSTKMLAEKISNHIDQYIEAMEKVKLKQGLRIGMSISSEGNAYLQESQFWKLYNEDQG 503
+ + ++ ++ I ++++LK L+ + IS GN Q+ + WK N
Sbjct: 408 KIELNENFWQIVNIKYERTINFFKQIELKAALKEILDISRIGNKIFQDKEPWKTKNSTPQ 467
Query: 504 SCSIVIRTSVGLVYLLACLLEPFMPSFS 531
+ ++ + L+ L+ L+ PFMP S
Sbjct: 468 TTKELLLNLIYLIRDLSILISPFMPHTS 495
>sp|Q44951|SYM_BORBU Methionine--tRNA ligase OS=Borrelia burgdorferi (strain ATCC 35210
/ B31 / CIP 102532 / DSM 4680) GN=metG PE=3 SV=2
Length = 734
Score = 513 bits (1320), Expect = e-144, Method: Compositional matrix adjust.
Identities = 247/511 (48%), Positives = 342/511 (66%), Gaps = 14/511 (2%)
Query: 24 KRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNALYICGTDEYGTATETKA 83
K+ L+T+ALPYVNN+PHLGN++ VLSAD FARY ++ G LY+CGTDEYGTATETKA
Sbjct: 2 KKMNLVTAALPYVNNIPHLGNLVQ-VLSADAFARYSKMSGIETLYVCGTDEYGTATETKA 60
Query: 84 MEENCTTQQICDKYYAIHKAVYNWFNISFDEFGRTSTPQQTEICQAIFKKLLENNWLSEY 143
+ EN T ++C+KYY IHK++Y WFNI FD FGRT+ +I Q F +L +N ++ E
Sbjct: 61 LIENTTPLELCNKYYEIHKSIYKWFNIEFDIFGRTTNKNHQDIVQNFFLQLEKNGYIKER 120
Query: 144 TTQQLYCDTCKRFLADRLVEGSCPTLGCNYDSARGDQCEKCGKLLNPTELKDPRCKVCQA 203
T+Q YC+ FLADR V G CP C A+GDQC+ C KLLNPT+L +P+C +C+
Sbjct: 121 ETEQFYCNKDSMFLADRYVIGECPE--CQ-SMAKGDQCDNCSKLLNPTDLINPKCIICKN 177
Query: 204 TPKIRDTDHLFLELPLIKDKLEEYINKMSVSGSWSQNAIQGTYAWLKDGLKPRCITRDLK 263
P ++ T+HL+L+LP IK KLE++I S +W+ NA++ T A+L+DGLK R ITRDLK
Sbjct: 178 KPILKKTNHLYLDLPKIKTKLEKWIKNPDTSKNWNTNALKMTKAFLRDGLKERAITRDLK 237
Query: 264 WGVPVPHEKFKDKVFYVWFDAPIGYISITSCYTPDWEEWWKNPENVALYQFMGKDNAPFH 323
WG+PVP + F++KVFYVWFDAPIGYISIT +WE WWKN + V L QF+GKDN FH
Sbjct: 238 WGIPVPKKGFENKVFYVWFDAPIGYISITKNIIKNWESWWKNNDQVNLVQFIGKDNILFH 297
Query: 324 TVMFPSTLLGTEENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGNDVKDTNIPAEVWRYY 383
T++FP +G+EENWT++ +S +EYLNYE KFSKS+G G+FGND T IP+++WR+Y
Sbjct: 298 TIIFPCIEIGSEENWTILNQLSSSEYLNYENLKFSKSEGTGIFGNDAITTGIPSDIWRFY 357
Query: 384 LITNRPEVSDTLFTWEDFQAKLNTELLNNLGNFVNRVLSFIAKPPGRGYGSIIPDSPKAD 443
+ NRPE SD F W+D ++NTEL++N N VNRVL+F K +G +I +
Sbjct: 358 IYYNRPEKSDFQFMWQDLMERVNTELIDNFSNLVNRVLTFQRK----FFGDVI------E 407
Query: 444 LHPSTKMLAEKISNHIDQYIEAMEKVKLKQGLRIGMSISSEGNAYLQESQFWKLYNEDQG 503
++I+ ++ + +K +LK L+ + ISS GN Q+++ WK N
Sbjct: 408 TIEIQNKFWKQITPKYNKILNLFKKTELKSALKEILKISSLGNKIFQDNEPWKRKNNSPQ 467
Query: 504 SCSIVIRTSVGLVYLLACLLEPFMPSFSLEV 534
+I + L+ L+ L+ PF+P S ++
Sbjct: 468 ETKELISNLIYLIRDLSILMMPFIPETSKKI 498
>sp|B7J2F0|SYM_BORBZ Methionine--tRNA ligase OS=Borrelia burgdorferi (strain ZS7)
GN=metG PE=3 SV=1
Length = 734
Score = 511 bits (1317), Expect = e-144, Method: Compositional matrix adjust.
Identities = 245/507 (48%), Positives = 340/507 (67%), Gaps = 14/507 (2%)
Query: 28 LITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNALYICGTDEYGTATETKAMEEN 87
L+T+ALPYVNN+PHLGN++ VLSAD FARY ++ G LY+CGTDEYGTATETKA+ EN
Sbjct: 6 LVTAALPYVNNIPHLGNLVQ-VLSADAFARYSKMSGIKTLYVCGTDEYGTATETKALIEN 64
Query: 88 CTTQQICDKYYAIHKAVYNWFNISFDEFGRTSTPQQTEICQAIFKKLLENNWLSEYTTQQ 147
T ++C+KYY IHK++Y WFNI FD FGRT+ +I Q F +L +N ++ E T+Q
Sbjct: 65 TTPLELCNKYYEIHKSIYKWFNIEFDIFGRTTNKNHQDIVQNFFLQLEKNGYIKERETEQ 124
Query: 148 LYCDTCKRFLADRLVEGSCPTLGCNYDSARGDQCEKCGKLLNPTELKDPRCKVCQATPKI 207
+C+ FLADR V G CP C A+GDQC+ C KLLNPT+L +P+C +C+ P +
Sbjct: 125 FFCNKDSMFLADRYVIGECPE--CQ-SMAKGDQCDNCSKLLNPTDLINPKCIICKNKPIL 181
Query: 208 RDTDHLFLELPLIKDKLEEYINKMSVSGSWSQNAIQGTYAWLKDGLKPRCITRDLKWGVP 267
+ T+HL+L+LP IK KLE++I S +W+ NA++ T A+L+DGLK R ITRDLKWG+P
Sbjct: 182 KKTNHLYLDLPKIKTKLEKWIKNPDTSKNWNTNALKMTKAFLRDGLKERAITRDLKWGIP 241
Query: 268 VPHEKFKDKVFYVWFDAPIGYISITSCYTPDWEEWWKNPENVALYQFMGKDNAPFHTVMF 327
VP + F++KVFYVWFDAPIGYISIT +WE WWKN + V L QF+GKDN FHT++F
Sbjct: 242 VPKKGFENKVFYVWFDAPIGYISITKNIIKNWESWWKNNDQVNLVQFIGKDNILFHTIIF 301
Query: 328 PSTLLGTEENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGNDVKDTNIPAEVWRYYLITN 387
P +G+EENWT++ +S +EYLNYE KFSKS+G G+FGND T IP+++WR+Y+ N
Sbjct: 302 PCIEIGSEENWTILNQLSSSEYLNYENLKFSKSEGTGIFGNDAITTGIPSDIWRFYIYYN 361
Query: 388 RPEVSDTLFTWEDFQAKLNTELLNNLGNFVNRVLSFIAKPPGRGYGSIIPDSPKADLHPS 447
RPE SD F W+D ++NTEL++N N VNRVL+F K +G +I +
Sbjct: 362 RPEKSDFQFMWQDLMERVNTELIDNFSNLVNRVLTFQRK----FFGDVI------ETIEI 411
Query: 448 TKMLAEKISNHIDQYIEAMEKVKLKQGLRIGMSISSEGNAYLQESQFWKLYNEDQGSCSI 507
++I+ ++ + +K +LK L+ + ISS GN Q+++ WK N
Sbjct: 412 QNKFWKQITPKYNKILNLFKKTELKSALKEILKISSLGNKIFQDNEPWKRKNNSPQETKE 471
Query: 508 VIRTSVGLVYLLACLLEPFMPSFSLEV 534
+I + L+ L+ L+ PF+P S ++
Sbjct: 472 LISNLIYLIRDLSILMMPFIPETSKKI 498
>sp|B5RPT6|SYM_BORRA Methionine--tRNA ligase OS=Borrelia recurrentis (strain A1) GN=metG
PE=3 SV=1
Length = 726
Score = 511 bits (1316), Expect = e-144, Method: Compositional matrix adjust.
Identities = 244/504 (48%), Positives = 336/504 (66%), Gaps = 14/504 (2%)
Query: 28 LITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNALYICGTDEYGTATETKAMEEN 87
LIT+ALPYVNN+PHLGN++ VLSAD FARY R+ G LY+CGTDEYGTATETKA+ E
Sbjct: 6 LITAALPYVNNIPHLGNLVQ-VLSADAFARYSRMMGIETLYVCGTDEYGTATETKALIEK 64
Query: 88 CTTQQICDKYYAIHKAVYNWFNISFDEFGRTSTPQQTEICQAIFKKLLENNWLSEYTTQQ 147
T +++C+KY+AIHK++Y WFNI FD FGRT+ E Q +F KL +N +++E +Q
Sbjct: 65 TTPEELCNKYHAIHKSIYEWFNIKFDIFGRTTNKYHKETVQDLFLKLDKNGYITEKENEQ 124
Query: 148 LYCDTCKRFLADRLVEGSCPTLGCNYDSARGDQCEKCGKLLNPTELKDPRCKVCQATPKI 207
+C + FLADR V G CP G N +GDQCE C LL EL +PRC +C+ P I
Sbjct: 125 FFCQQDQMFLADRYVTGECPNCGNN---TKGDQCENCSNLLVTNELLNPRCIICKNIPII 181
Query: 208 RDTDHLFLELPLIKDKLEEYINKMSVSGSWSQNAIQGTYAWLKDGLKPRCITRDLKWGVP 267
+ T HL+++LP IK++LE +I ++ + +W+ NAI+ T A+L+DGLK R ITRDLKWG+P
Sbjct: 182 KKTKHLYIDLPKIKNELEHWIQQIDQNTNWNINAIKITNAFLRDGLKERTITRDLKWGIP 241
Query: 268 VPHEKFKDKVFYVWFDAPIGYISITSCYTPDWEEWWKNPENVALYQFMGKDNAPFHTVMF 327
VP +++++KVFYVWFDAPIGYISIT DWE WWKN E+ L QF+GKDN FHT+MF
Sbjct: 242 VPKKEYENKVFYVWFDAPIGYISITKEIIKDWESWWKNNEDTNLIQFIGKDNILFHTIMF 301
Query: 328 PSTLLGTEENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGNDVKDTNIPAEVWRYYLITN 387
PS LG++ENWT++ ++ +EYLNYE KFSKS G G+FGNDV T IP++VWR+Y+ N
Sbjct: 302 PSIELGSQENWTMLNKLASSEYLNYENLKFSKSAGTGIFGNDVITTEIPSDVWRFYIYYN 361
Query: 388 RPEVSDTLFTWEDFQAKLNTELLNNLGNFVNRVLSFIAKPPGRGYGSIIPDSPKADLHPS 447
RPE +D F W+DF ++N+EL+ N N +NRVL+F K G K D
Sbjct: 362 RPEKADFQFMWDDFMERINSELIGNFSNLINRVLTFYKKFFG----------DKIDKIEL 411
Query: 448 TKMLAEKISNHIDQYIEAMEKVKLKQGLRIGMSISSEGNAYLQESQFWKLYNEDQGSCSI 507
+ + ++ ++ I ++++LK L+ + IS GN Q+ + WK N +
Sbjct: 412 NENFWQIVNIKYERTINFFKQIELKAALKEILDISRIGNKIFQDKEPWKTKNSTPQTTKE 471
Query: 508 VIRTSVGLVYLLACLLEPFMPSFS 531
++ + L+ L+ L+ PFMP S
Sbjct: 472 LLLNLIYLIRDLSILISPFMPHTS 495
>sp|Q660T5|SYM_BORGA Methionine--tRNA ligase OS=Borrelia garinii (strain PBi) GN=metG
PE=3 SV=1
Length = 724
Score = 511 bits (1316), Expect = e-144, Method: Compositional matrix adjust.
Identities = 247/507 (48%), Positives = 341/507 (67%), Gaps = 14/507 (2%)
Query: 28 LITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNALYICGTDEYGTATETKAMEEN 87
L+T+ALPYVNN+PHLGN++ VLSAD FARY ++ G LYICGTDEYGTATETKA+ E
Sbjct: 6 LVTAALPYVNNIPHLGNLVQ-VLSADAFARYSKMSGIETLYICGTDEYGTATETKALIEK 64
Query: 88 CTTQQICDKYYAIHKAVYNWFNISFDEFGRTSTPQQTEICQAIFKKLLENNWLSEYTTQQ 147
+ ++C+KYY IHK++Y WFNI FD FGRT+ +I Q F KL +N ++ E T+Q
Sbjct: 65 TSPLELCNKYYKIHKSIYKWFNIEFDIFGRTTNKHHQDIVQNFFLKLEKNGYIKERETEQ 124
Query: 148 LYCDTCKRFLADRLVEGSCPTLGCNYDSARGDQCEKCGKLLNPTELKDPRCKVCQATPKI 207
+C+ FLADR V G CP C A+GDQCE C KLLNP +L +P+C +C+ P +
Sbjct: 125 FFCNKDSIFLADRYVIGECPE--CQ-SIAKGDQCENCSKLLNPIDLINPKCIICKNKPVL 181
Query: 208 RDTDHLFLELPLIKDKLEEYINKMSVSGSWSQNAIQGTYAWLKDGLKPRCITRDLKWGVP 267
+ T+HL+++LP IK KLE++I + S +W+ NA++ T A+L+DGLK R ITRDLKWG+P
Sbjct: 182 KKTNHLYIDLPKIKRKLEKWIKNSTTSKNWNTNALKMTNAFLRDGLKERAITRDLKWGIP 241
Query: 268 VPHEKFKDKVFYVWFDAPIGYISITSCYTPDWEEWWKNPENVALYQFMGKDNAPFHTVMF 327
VP + +++KVFYVWFDAPIGYISIT +WE WWKN E V L QF+GKDN FHTV+F
Sbjct: 242 VPKKGYENKVFYVWFDAPIGYISITKNLVKNWESWWKNNEQVNLVQFIGKDNILFHTVIF 301
Query: 328 PSTLLGTEENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGNDVKDTNIPAEVWRYYLITN 387
PS +G++ENWT++ +S +EYLNYE KFSKS+G G+FGNDV T IP++VWR+Y+ N
Sbjct: 302 PSIEIGSKENWTILNQLSSSEYLNYENLKFSKSEGTGIFGNDVITTGIPSDVWRFYIYYN 361
Query: 388 RPEVSDTLFTWEDFQAKLNTELLNNLGNFVNRVLSFIAKPPGRGYGSIIPDSPKADLHPS 447
RPE SD F W+D ++NTEL++N N VNRVL+F K +G +I +
Sbjct: 362 RPEKSDFQFMWQDLMERVNTELIDNFSNLVNRVLTFQKK----FFGDVI-----ETIEIQ 412
Query: 448 TKMLAEKISNHIDQYIEAMEKVKLKQGLRIGMSISSEGNAYLQESQFWKLYNEDQGSCSI 507
K + I + ++ + +K +LK L+ + ISS GN Q+++ WK +
Sbjct: 413 NKFWKQIIPKY-NKILNLFKKTELKSALKEILKISSLGNKIFQDNEPWKRKDSSPQETKE 471
Query: 508 VIRTSVGLVYLLACLLEPFMPSFSLEV 534
+I + L+ L+ L+ PF+P S ++
Sbjct: 472 LISNLIYLIRDLSILMMPFIPETSKKI 498
>sp|Q0SMS1|SYM_BORAP Methionine--tRNA ligase OS=Borrelia afzelii (strain PKo) GN=metG
PE=3 SV=1
Length = 724
Score = 505 bits (1300), Expect = e-142, Method: Compositional matrix adjust.
Identities = 246/507 (48%), Positives = 337/507 (66%), Gaps = 14/507 (2%)
Query: 28 LITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNALYICGTDEYGTATETKAMEEN 87
LIT+ALPYVNN+PHLGN++ VLSAD FARY ++ G LYICGTDEYGTATETKA+ E
Sbjct: 6 LITAALPYVNNIPHLGNLVQ-VLSADAFARYSKMSGIETLYICGTDEYGTATETKALIEK 64
Query: 88 CTTQQICDKYYAIHKAVYNWFNISFDEFGRTSTPQQTEICQAIFKKLLENNWLSEYTTQQ 147
T ++C+KYY IHK++Y WFNI FD FGRT+ E Q F KL +N ++ E T+Q
Sbjct: 65 TTPLELCNKYYEIHKSIYKWFNIEFDIFGRTTNKHHQETVQNFFLKLEKNGYIKERETEQ 124
Query: 148 LYCDTCKRFLADRLVEGSCPTLGCNYDSARGDQCEKCGKLLNPTELKDPRCKVCQATPKI 207
+C+ FLADR V G CP C A+GDQC+ C KLLNPT+L +P+C +C+ P +
Sbjct: 125 FFCNKDLIFLADRYVIGECPE--CQ-SMAKGDQCDNCSKLLNPTDLINPKCIICKNKPIL 181
Query: 208 RDTDHLFLELPLIKDKLEEYINKMSVSGSWSQNAIQGTYAWLKDGLKPRCITRDLKWGVP 267
+ T+HL+++LP IK KLE++I + S +W+ NA++ T A+L+DGLK R ITRDLKWG+P
Sbjct: 182 KKTNHLYIDLPKIKTKLEKWIKNPTTSKNWNTNALKMTNAFLRDGLKERAITRDLKWGIP 241
Query: 268 VPHEKFKDKVFYVWFDAPIGYISITSCYTPDWEEWWKNPENVALYQFMGKDNAPFHTVMF 327
VP + +++KVFYVWFDAPIGYISIT +WE WWKN + V L QF+GKDN FHT+MF
Sbjct: 242 VPKKGYENKVFYVWFDAPIGYISITKNIVKNWESWWKNNKQVNLVQFIGKDNILFHTIMF 301
Query: 328 PSTLLGTEENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGNDVKDTNIPAEVWRYYLITN 387
P +G++ENWT + +S +EYLNYE KFSKS+G G+FGNDV T IP++VWR+Y+ N
Sbjct: 302 PCIKIGSKENWTTLNQLSSSEYLNYENLKFSKSEGTGIFGNDVITTGIPSDVWRFYIYYN 361
Query: 388 RPEVSDTLFTWEDFQAKLNTELLNNLGNFVNRVLSFIAKPPGRGYGSIIPDSPKADLHPS 447
RPE SD F W+D ++NTEL++N N VNRVL+F K +G +I +
Sbjct: 362 RPEKSDFQFIWQDLMERVNTELIDNFSNLVNRVLTFQKK----FFGDVI------ETIEI 411
Query: 448 TKMLAEKISNHIDQYIEAMEKVKLKQGLRIGMSISSEGNAYLQESQFWKLYNEDQGSCSI 507
E+I+ ++ + + +LK L+ + ISS GN Q+++ WK
Sbjct: 412 QHKFWEQITPKYNKILNLFKNTELKSALKEILKISSFGNKIFQDNEPWKRKESSPQEIKE 471
Query: 508 VIRTSVGLVYLLACLLEPFMPSFSLEV 534
+I + L+ L+ L+ PF+P S ++
Sbjct: 472 LILNLIYLIRDLSILMMPFIPETSKKI 498
>sp|A1R019|SYM_BORT9 Methionine--tRNA ligase OS=Borrelia turicatae (strain 91E135)
GN=metG PE=3 SV=1
Length = 726
Score = 504 bits (1298), Expect = e-142, Method: Compositional matrix adjust.
Identities = 254/592 (42%), Positives = 363/592 (61%), Gaps = 27/592 (4%)
Query: 24 KRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNALYICGTDEYGTATETKA 83
K+ LIT+ALPYVNN+PHLGN++ VLSAD FARY R+ + LY+CGTDEYGTATETKA
Sbjct: 2 KKKNLITAALPYVNNIPHLGNLVQ-VLSADAFARYSRMMDIDTLYVCGTDEYGTATETKA 60
Query: 84 MEENCTTQQICDKYYAIHKAVYNWFNISFDEFGRTSTPQQTEICQAIFKKLLENNWLSEY 143
+ E T +++C++YYAIHK++Y WFNI FD FGRT+ + Q +F KL +N ++++
Sbjct: 61 LIEKTTPEELCNRYYAIHKSIYEWFNIKFDIFGRTTNKSHKQTVQDLFLKLEKNGYITDK 120
Query: 144 TTQQLYCDTCKRFLADRLVEGSCPTLGCNYDSARGDQCEKCGKLLNPTELKDPRCKVCQA 203
++Q +C + FLADR V G CP G N A+GDQCE C KLL P +L +P+C +C+
Sbjct: 121 ESEQFFCQQDQMFLADRYVTGECPNCGNN---AKGDQCENCSKLLAPIDLINPKCIICKN 177
Query: 204 TPKIRDTDHLFLELPLIKDKLEEYINKMSVSGSWSQNAIQGTYAWLKDGLKPRCITRDLK 263
P I+ T HL++ LP IK++L ++ + +W+ NAI+ T A+L+DGLK R ITRDLK
Sbjct: 178 IPIIKTTKHLYINLPKIKNELIHWMQTTEHNTNWNTNAIKTTNAFLRDGLKERAITRDLK 237
Query: 264 WGVPVPHEKFKDKVFYVWFDAPIGYISITSCYTPDWEEWWKNPENVALYQFMGKDNAPFH 323
WG+PVP +++++KVFYVWFDAPIGYISIT + DWE WWKN + L QF+GKDN FH
Sbjct: 238 WGIPVPKKEYENKVFYVWFDAPIGYISITKEISKDWESWWKNNKETNLVQFIGKDNILFH 297
Query: 324 TVMFPSTLLGTEENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGNDVKDTNIPAEVWRYY 383
TV+FP+ LG++ENWT++ ++ +EYLNYE KFSKS G+G+FGNDV T I A++WR+Y
Sbjct: 298 TVIFPAIKLGSKENWTMLGKLASSEYLNYEHLKFSKSAGIGIFGNDVITTGISADIWRFY 357
Query: 384 LITNRPEVSDTLFTWEDFQAKLNTELLNNLGNFVNRVLSFIAKPPGRGYGSIIPDSPKAD 443
+ NRPE SD F W+DF ++N+EL+ N N VNRVL+F K G +I K D
Sbjct: 358 IYYNRPEKSDFQFMWDDFMERINSELIGNFSNLVNRVLTFYKKFFGDKIDTI---EIKED 414
Query: 444 LHPSTKMLAEKISNHIDQYIEAMEKVKLKQGLRIGMSISSEGNAYLQESQFWKLYNEDQG 503
+ +K N Q ++LK L+ + IS GN Q+ + WK +
Sbjct: 415 FWKEINLKYDKTLNFFKQ-------IELKSALKEILDISRIGNKIFQDKEPWKTKDSTPK 467
Query: 504 SCSIVIRTSVGLVYLLACLLEPFMPSFSLEVLKQLNVPTETKFSLSDENGDLERARKPWE 563
++ + L+ L+ L+ PF+P S ++ + E N L
Sbjct: 468 KTKELLLNLIYLIRDLSILISPFIPHTSDKIRRFFGESYEISNKFLGTNLGL-------- 519
Query: 564 ILPAGHRIGMSSPLFKELKDEDVRFFREKFAGSQADRAVQAEAEAKRLAEHL 615
+ I + LF +L+ E + + K++G + + Q E +E +
Sbjct: 520 -----NTIQFTEVLFTKLEKELIDSLKLKYSGGKNMQDEQTENPINLFSEKV 566
>sp|A8ZQ66|SYM1_ACAM1 Methionine--tRNA ligase 1 OS=Acaryochloris marina (strain MBIC
11017) GN=metG1 PE=3 SV=1
Length = 558
Score = 439 bits (1130), Expect = e-122, Method: Compositional matrix adjust.
Identities = 235/574 (40%), Positives = 326/574 (56%), Gaps = 26/574 (4%)
Query: 28 LITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNALYICGTDEYGTATETKAMEEN 87
LITSALPY+N + HLGN++G +L AD++AR+ R G LYIC TDE+GT E A++
Sbjct: 4 LITSALPYINGIKHLGNLVGSMLPADIYARFLRQEGEEVLYICATDEHGTPAEIAAIDAG 63
Query: 88 CTTQQICDKYYAIHKAVYNWFNISFDEFGRTSTPQQTEICQAIFKKLLENNWLSEYTTQQ 147
+ C K Y K +Y F +SFD FGRTS P+ E+ Q +++L + N++ E Q
Sbjct: 64 LEVAEFCAKQYHKQKEIYKRFGLSFDYFGRTSAPENHELTQYFYQQLAKQNFIEEREISQ 123
Query: 148 LYCDTCKRFLADRLVEGSCPTLGCNYDSARGDQCEKCGKLLNPTELKDPRCKVCQATP-K 206
Y +RFL DR V G+CP C Y+ ARGDQCE C K+L PTEL PR + +T +
Sbjct: 124 FYALDDQRFLPDRYVTGTCP--HCGYEQARGDQCENCTKVLTPTELIKPRSTISGSTHLE 181
Query: 207 IRDTDHLFLELPLIKDKLEEYINKMSVSGSWSQNAIQGTYAWLKDGLKPRCITRDLKWGV 266
+R + HLFL L + D++ +++K + WS WL +GLK RCITRDL WGV
Sbjct: 182 LRTSRHLFLRLDKLSDEVRNWVDKQT---QWSTLTKSIALKWLNEGLKSRCITRDLVWGV 238
Query: 267 PVPHEKFKDKVFYVWFDAPIGYISITSCY----TPDWEEWWKNPENVALYQFMGKDNAPF 322
PVP E F+ KVFYVWFDAPIGYIS T + DWE WWK ++V QFM KDN PF
Sbjct: 239 PVPTEGFERKVFYVWFDAPIGYISATKAWGDITNNDWECWWKESDDVHYTQFMAKDNLPF 298
Query: 323 HTVMFPSTLLGTEENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGNDVKDTNIPAEVWRY 382
HT+M+P+T+LG+ E W ++ I +LNY GKFS S GVF + + A+ WRY
Sbjct: 299 HTIMWPATILGSREPWKMVDYIKGFNWLNYYGGKFSTSSQRGVFLDQALEI-ASADNWRY 357
Query: 383 YLITNRPEVSDTLFTWEDFQAKLNTELLNNLGNFVNRVLSFIAKPPGRGY-GSIIPDSPK 441
LI N PE +D+ FTWE FQ ++N EL +NLGNFVNR+L F A G P +
Sbjct: 358 MLIANAPESADSAFTWEQFQKQVNKELADNLGNFVNRILKFTASRFGMTLPEGGTPGDAE 417
Query: 442 ADLHPSTKMLAEKISNHIDQYIEAMEKVKLKQGLRIGMSISSEGNAYLQESQFWKLYNED 501
A+L + L EK+ +Y+ +E + + L ++ GN Y+ W L+ D
Sbjct: 418 AELQVTCNELVEKLR----KYLHNLEFRRATETLN---ALWRTGNQYIDVRAPWVLFKTD 470
Query: 502 QGSCSIVIRTSVGLVYLLACLLEPFMPSFSLEVLKQLNVPTETKFSLSDENGDLERARKP 561
Q ++VIRT V L+ L A PF+P + + L + + E DL
Sbjct: 471 QDETAMVIRTCVNLIRLYAISSAPFIPHTTQALFDALQLTDVERRHTMTEASDL------ 524
Query: 562 WEILPAGHRIGMSSPLFKELKDEDVRFFREKFAG 595
+L AG + +PLF+++ D+ V + ++ G
Sbjct: 525 -TLLAAGRSFMVPAPLFQKIDDDLVAELKAQYGG 557
>sp|Q8SQW5|SYMC_ENCCU Probable methionine--tRNA ligase, cytoplasmic OS=Encephalitozoon
cuniculi (strain GB-M1) GN=ECU11_0890 PE=3 SV=1
Length = 550
Score = 432 bits (1111), Expect = e-120, Method: Compositional matrix adjust.
Identities = 244/565 (43%), Positives = 329/565 (58%), Gaps = 40/565 (7%)
Query: 28 LITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNALYICGTDEYGTATETKAMEEN 87
ITSALPYVNN PHLGNIIG VLS DV++RYC+ +G ++YICGTDEYGTA E +A+ +
Sbjct: 4 FITSALPYVNNQPHLGNIIGSVLSGDVYSRYCKKKGEVSVYICGTDEYGTAIEMEAISQG 63
Query: 88 CTTQQICDKYYAIHKAVYNWFNISFDEFGRTSTPQQTEICQAIFKKLLENNWLSEYTTQQ 147
T +IC+K +HK VY+WFNI FD FG TS+ T + Q +F K+ +N SE +Q
Sbjct: 64 VTPLEICEKNRKLHKQVYDWFNIDFDYFGFTSSATHTGLVQDLFMKMYDNGHFSEVEIEQ 123
Query: 148 LYCDTCKRFLADRLVEGSCPTLGCNYDSARGDQCEKCGKLLNPTELKDPRCKVCQATPKI 207
YC+ C FLADR + G C C ARGDQC+ CG N EL PRC +C ++P +
Sbjct: 124 FYCEHCGLFLADRFIVGECKF--CGDGRARGDQCDSCGHTYNSLELLSPRCSICSSSPVV 181
Query: 208 RDTDHLFLELPLIKDKLEEYINKMSVSGSWSQNAIQGTYAWLKDGLKPRCITRDLK--WG 265
R T HLF +L + LEE + WSQNA W+ PRC+TRDLK WG
Sbjct: 182 RATTHLFFDLEAFRPSLEELYR--TNGHLWSQNAQNIFRQWISMEFYPRCMTRDLKFNWG 239
Query: 266 VPVPHEKFKDKVFYVWFDAPIGYIS-ITSCYTPDWEEWWKNPENVALYQFMGKDNAPFHT 324
VPVP EKFK+KVFYVWFDAPIGY++ + D+ EW K+ E L QFMGKDN FHT
Sbjct: 240 VPVPLEKFKEKVFYVWFDAPIGYLTFLKELVGEDFGEWCKDAE---LVQFMGKDNVAFHT 296
Query: 325 VMFPSTLLGTEENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGNDVKDTNIPAE-VWRYY 383
V+FP+ L T E + +++ +S TEYL +E KFSKS+ G+FG D+ + +WRYY
Sbjct: 297 VIFPAMLYATGEKYPVVRRLSATEYLQFENEKFSKSRRHGIFGLDLVGGGLGKSCMWRYY 356
Query: 384 LITNRPEVS-DTLFTWEDFQAKLNTELLNNLGNFVNRVLSFIAKPPGRGYGSIIPDSPKA 442
L+ RPE + D+ FT+ DF+ + +L+NNLGNFVNRVL +I + DS
Sbjct: 357 LLKIRPESTKDSNFTFSDFRQSVTADLINNLGNFVNRVLKYIQSKCNSRVSLLELDS--- 413
Query: 443 DLHPSTKMLAEKISNHIDQYIEAMEKVKLKQGLRIGMSISSEGNAYLQESQFWKLYNEDQ 502
K E ++ +Y ME++KL++ L++ M I GN Y+QE + + D+
Sbjct: 414 ----GDKKCIEDVNELYCKYKAKMEEIKLREALQVVMEICRRGNEYIQEG----VRSRDR 465
Query: 503 GSCSIVIRTSVGLVYLLACLLEPFMPSFSLEVLKQLNVPTETKFSLSDENGDLERARKPW 562
+ S+ + L+ LL PF+P SLE+L+ N+ ET F S D
Sbjct: 466 KGHFFCLGFSI--IGLVGTLLHPFIPVTSLEILRMCNLE-ETMFPESMRIVD-------- 514
Query: 563 EILPAGHRIGMS-SPLFKELKDEDV 586
GH +G PLF++ E +
Sbjct: 515 -----GHTMGSDIRPLFEDFTTEQI 534
>sp|Q82F60|SYM_STRAW Methionine--tRNA ligase OS=Streptomyces avermitilis (strain ATCC
31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 /
MA-4680) GN=metG PE=3 SV=1
Length = 574
Score = 430 bits (1106), Expect = e-119, Method: Compositional matrix adjust.
Identities = 229/585 (39%), Positives = 338/585 (57%), Gaps = 33/585 (5%)
Query: 28 LITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNALYICGTDEYGTATETKAMEEN 87
LITSALPY+N + HLGN++G +L ADV++RY R RG++ LYIC TDE+GT E A E
Sbjct: 5 LITSALPYINGIKHLGNMVGSMLPADVYSRYLRQRGHDVLYICATDEHGTPAELAAKERG 64
Query: 88 CTTQQICDKYYAIHKAVYNWFNISFDEFGRTSTPQQTEICQAIFKKLLENNWLSEYTTQQ 147
+ C + + KAVY+ F ++FD FGR+S+ Q EI Q ++L EN ++ E +Q
Sbjct: 65 LPVDEFCAQAHDAQKAVYDGFELAFDYFGRSSSEQNREITQHFARRLNENGFIEERAIRQ 124
Query: 148 LYCDTCKRFLADRLVEGSCPTLGCNYDSARGDQCEKCGKLLNPTELKDPRCKVCQATP-K 206
+Y RFL DR VEG+CP C YD ARGDQCE C ++L+PT+L +PR + +T +
Sbjct: 125 VYSPADGRFLPDRYVEGTCPH--CGYDKARGDQCENCTRVLDPTDLINPRSAISGSTDLE 182
Query: 207 IRDTDHLFLELPLIKDKLEEYINKMSVSGSWSQNAIQGTYAWLKDGLKPRCITRDLKWGV 266
+R+T HLFL ++ ++EE++ + W Q A WL +GL R ITRDL WGV
Sbjct: 183 VRETKHLFLLQSKLQHEVEEWVARH--EEEWPQLASSIARKWLNEGLHDRAITRDLDWGV 240
Query: 267 PVPHEKFKD-----KVFYVWFDAPIGYISITSCYTP------DWEEWWKNPEN----VAL 311
PVP + + + KVFYVWFDAPI YI T ++ DW+ WW + ++ V
Sbjct: 241 PVPADTWPELAAEGKVFYVWFDAPIEYIGATKEWSDLDPENRDWKSWWYDADSGENPVRY 300
Query: 312 YQFMGKDNAPFHTVMFPSTLLGTEENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGNDVK 371
+FM KDN PFHTVMFP+T LG E W + + +L Y GKFS S+ GVF +
Sbjct: 301 TEFMAKDNVPFHTVMFPATELGVREPWKKVDYVKAFNWLTYYGGKFSTSQKRGVFTDHAL 360
Query: 372 DTNIPAEVWRYYLITNRPEVSDTLFTWEDFQAKLNTELLNNLGNFVNRVLSFIAKPPGRG 431
+ +PA+ WRY+LI N PE D+ FTWE F A +N +L + LGNFVNRVLSF K
Sbjct: 361 EI-LPADYWRYFLIANAPESDDSSFTWEHFTATVNKDLADTLGNFVNRVLSFSKK----R 415
Query: 432 YGSIIPDSPKADLHPSTKMLAEKISNHIDQYIEAMEKVKLKQGLRIGMSISSEGNAYLQE 491
+G +P A S L E+I+ + +Y ME ++ ++ ++ S GN+YL+E
Sbjct: 416 FGEEVPAGAPAG--ESETKLGEEIAALLAEYESHMETLQFRKAAAALRALWSAGNSYLEE 473
Query: 492 SQFWKLYNEDQGSCSIVIRTSVGLVYLLACLLEPFMPSFSLEVLKQLNVPTETKFSLSDE 551
W + ++ +RT++ L++L + + EPF+P+ S + + +T ++ +
Sbjct: 474 KAPWLEIKTNPEGAALTLRTAMNLIHLYSVVSEPFIPASSKAMRSAFALSEDTATWVTQD 533
Query: 552 NGDLERARKPWEILPAGHRIGMSSPLFKELKDEDVRFFREKFAGS 596
K + +PAG + LF ++ DED+ ++E+F G+
Sbjct: 534 EA------KSLDSVPAGTPFTVPPVLFAKITDEDLESYKERFGGA 572
>sp|Q0ANL8|SYM_MARMM Methionine--tRNA ligase OS=Maricaulis maris (strain MCS10) GN=metG
PE=3 SV=1
Length = 572
Score = 417 bits (1073), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/594 (38%), Positives = 329/594 (55%), Gaps = 52/594 (8%)
Query: 27 ILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNALYICGTDEYGTATETKAMEE 86
ILITSALPY+N V HLGN+ G +L ADV+AR+ RLRG++ LY+C TDE+GT E A
Sbjct: 4 ILITSALPYINGVKHLGNLAGSMLPADVYARFQRLRGHDVLYVCATDEHGTPAELAADAA 63
Query: 87 NCTTQQICDKYYAIHKAVYNWFNISFDEFGRTSTPQQTEICQAIFKKLLENNWLSEYTTQ 146
+ CD+ + I K F++S+D FGRTS + Q + L E ++E +
Sbjct: 64 GMDVRAYCDEQHDIQKRSGEGFSLSYDYFGRTSNAPNIRLTQHFAQVLEEKGLIAERVEE 123
Query: 147 QLYCDTCKRFLADRLVEGSCPTLGCNYDSARGDQCEKCGKLLNPTELKDPRCKVCQA-TP 205
Q++ RFL DR VEG+CP C ++ ARGDQC+ CG+LL PT+LK+P K+ +
Sbjct: 124 QVFSIDDDRFLPDRYVEGTCPH--CGFERARGDQCDNCGRLLEPTDLKEPYSKISGSKNL 181
Query: 206 KIRDTDHLFLELPLIKDKLEEYINKMSVSGSWSQNAIQGTYAWLKDGLKPRCITRDLKWG 265
++R+T HL L ++ K+ ++++ S W A Y WL +GL+ R ITRDLKWG
Sbjct: 182 EVRETKHLHLVQTQMETKIRDWVD---ASTEWPSLAKSIAYKWLDEGLRDRSITRDLKWG 238
Query: 266 VPV-----PHEKFKDKVFYVWFDAPIGYISITSCYTP----DWEEWW---KNPENVALYQ 313
VPV P E F+ KVFYVWFDAPIGYI T + DWE WW K ++V Q
Sbjct: 239 VPVAQDGTPREGFEGKVFYVWFDAPIGYIGATVEWAEAGGGDWESWWRTDKGADDVTYVQ 298
Query: 314 FMGKDNAPFHTVMFPSTLLGTEENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGNDVKDT 373
FMGKDN FHTV FP+T+LG+EE W + + +L + GKFS S+ GVF + D
Sbjct: 299 FMGKDNVAFHTVSFPATILGSEEPWKTVDKLKAFNWLTWYGGKFSTSEKRGVFMDQALDI 358
Query: 374 NIPAEVWRYYLITNRPEVSDTLFTWEDFQAKLNTELLNNLGNFVNRVLSF-IAKPPGRGY 432
+P + WR+YL N PE SD FTWE FQ +N++L N LGNFVNR+ + ++K G
Sbjct: 359 -LPGDYWRWYLTANAPEGSDAAFTWEHFQGLINSDLANVLGNFVNRITKYTVSKFDGTLP 417
Query: 433 GSIIPDSPKADLHPSTKMLAEKISNHIDQYIEAMEKVKLKQGLRIGMSISSEGNAYLQES 492
+ P +A +A ++ + + ME ++ ++ +I + GN YL ++
Sbjct: 418 SAGTPGENEA-------WMAAELDQRLPALVANMEAMEFRKAAAEVRAIWAAGNEYLTKA 470
Query: 493 QFWKLYNEDQGSCSIVIRTSVGLVYLLACLLEPFMPSFSLEVLKQLNVPTETKFSLSDEN 552
+ W Y D + ++ +RT + LV L L +PF+P + ++L L VP +
Sbjct: 471 EPWVKYKSDVDAAAVGVRTGLNLVALFGILAQPFIPEAASKILDALGVPDD--------- 521
Query: 553 GDLERARKPWEI----------LPAGHRIGMSSPLFKELKDEDVRFFREKFAGS 596
R+ WE LP G I + LF +++D V + E+F G+
Sbjct: 522 ------RRSWEFDGPASALLDALPHGMAITPPAVLFAKIEDAQVAEWTERFGGA 569
>sp|Q5UR82|SYM_MIMIV Methionine--tRNA ligase OS=Acanthamoeba polyphaga mimivirus GN=MARS
PE=1 SV=1
Length = 550
Score = 417 bits (1071), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/537 (40%), Positives = 326/537 (60%), Gaps = 35/537 (6%)
Query: 25 RNILITSALPYVNNV-PHLGNIIGCVLSADVFARYCRLRGYNALYICGTDEYGTATETKA 83
+ +TSALPY NN PHLGN++G +LS DV+AR+ R +G+ +Y+CGTDEYGT T +A
Sbjct: 2 QKFFVTSALPYPNNSSPHLGNLVGALLSGDVYARFKRNQGHEVIYLCGTDEYGTTTMIRA 61
Query: 84 MEENCTTQQICDKYYAIHKAVYNWFNISFDEFGRTSTPQQTEICQAIFKKLLENNWLSEY 143
+E T +++CDKY+ +HK VY+WFNI FD FGRTST +QTEI IF L N ++ E
Sbjct: 62 RKEGVTCRELCDKYFELHKKVYDWFNIEFDVFGRTSTTKQTEITWEIFNGLYNNGYIEEK 121
Query: 144 TTQQLYCDTCKRFLADRLVEGSCPTLGC--NYDSARGDQCEKCGKLLNPTELKDPRCKVC 201
TT Q +C+ C +LAD ++G C GC N + GDQCE C K+++ +L +P C +C
Sbjct: 122 TTVQAFCEKCDMYLADTYLKGYCYHDGCRENRVISNGDQCEICQKMIDVNKLINPFCSIC 181
Query: 202 QATPKIRDTDHLFLELPLIKDKLEEYINKMSVSGSWSQNAIQGTYAWLKDGLKPRCITRD 261
P + TDHL+L L + +++Y++++ + + + AWL+ GL PRCITRD
Sbjct: 182 LTPPIQKSTDHLYLSLDKLTPLVQQYLDRV----EFDSRIMAISKAWLEIGLNPRCITRD 237
Query: 262 LKWGVPVP------HEKFKDKVFYVWFDAPIGYISITSCYTPDWEEWWKNPENVALYQFM 315
L+WG P+P EK+ DKVFYVWFDAPIGY SI + DW EW + V
Sbjct: 238 LEWGTPIPINLDPKLEKYADKVFYVWFDAPIGYYSILANERDDWREWLNS--GVTWVSTQ 295
Query: 316 GKDNAPFHTVMFPSTLLGTEENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGNDVKDTN- 374
KDN PFH+++FP++++G+ L+ I T+YL YE KFSKS+GVG+FG+ V + +
Sbjct: 296 AKDNVPFHSIVFPASVIGSNIELPLIDRICGTDYLLYEGQKFSKSQGVGLFGDKVAEISP 355
Query: 375 ---IPAEVWRYYLITNRPEVSDTLFTWEDFQAKLNTELLNNLGNFVNRVLSFIAKPPGRG 431
I + WR+YL+ RPE D+ F E+F + T+L+NN+GNF+NRV S + K P R
Sbjct: 356 KLGINEDYWRFYLMKIRPETQDSSFNLEEFVRIVKTDLVNNIGNFINRVFSLLEKTPYR- 414
Query: 432 YGSIIPDSPKADLHPSTKMLAEKISNHIDQYIEAMEKVKLKQGLRIGMSISSEGNAYLQE 491
DL+ ++ + I +Y +M++ K + GL+I + +SS GN ++Q
Sbjct: 415 -----------DLN---YQISPEYIEFIKKYEVSMDEFKFRDGLKICLEMSSRGNKFVQS 460
Query: 492 SQFWKLYNEDQGSCSIVIRTSVGLVYLLACLLEPFMPSFSLEVLKQLNVPTETKFSL 548
++ W + + + I+ +VG+ ++L LL+P +P + ++L L+ + F L
Sbjct: 461 TKPWTMIKDGLDTQEIMTE-AVGICWILLNLLKPIIPKSACDMLSNLDTDNQNIFCL 516
>sp|Q0C161|SYM_HYPNA Methionine--tRNA ligase OS=Hyphomonas neptunium (strain ATCC 15444)
GN=metG PE=3 SV=1
Length = 579
Score = 414 bits (1064), Expect = e-114, Method: Compositional matrix adjust.
Identities = 222/594 (37%), Positives = 334/594 (56%), Gaps = 39/594 (6%)
Query: 24 KRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNALYICGTDEYGTATETKA 83
+R ILITSALPY+N V HLGN+ G +L ADV+AR RL+G++ YIC TDE+GT E A
Sbjct: 4 QRRILITSALPYINGVKHLGNLAGSMLPADVYARVMRLQGHDVTYICATDEHGTPAELAA 63
Query: 84 MEENCTTQQICDKYYAIHKAVYNWFNISFDEFGRTSTPQQTEICQAIFKKLLENNWLSEY 143
+ Q CD+ Y + + FN+SFD FGRTS P + Q + ++L +N +
Sbjct: 64 QATGQSVQAYCDEQYEVQRKAGEGFNLSFDWFGRTSRPANHTLTQHLAQQLEKNGLIEVR 123
Query: 144 TTQQLYCDTCKRFLADRLVEGSCPTLGCNYDSARGDQCEKCGKLLNPTELKDPRCKVCQA 203
T++Q+Y RFL DR VEG+CP C Y+ ARGDQC+ CG+LL+P +L +P V +
Sbjct: 124 TSKQVYAVDDGRFLPDRYVEGTCPH--CGYEKARGDQCDNCGRLLDPVDLINPYSAVSGS 181
Query: 204 -TPKIRDTDHLFLELPLIKDKLEEYINKMSVSGSWSQNAIQGTYAWLKDGLKPRCITRDL 262
+IRDTDHL+L ++D++ +++N + +W A+ WL +GL R I+RDL
Sbjct: 182 RNIEIRDTDHLYLLQTGMQDRIRDWVN--AKGKNWPSLAVSIANKWLDEGLIARSISRDL 239
Query: 263 KWGVPV------PHEKFKDKVFYVWFDAPIGYISITSCYTP----DWEEWW---KNPENV 309
WGV V P F++KVFYVWFDAPIGYIS T + DWE+ W K +
Sbjct: 240 SWGVKVTDADGNPRPGFENKVFYVWFDAPIGYISATQEWAEATGNDWEKLWLTDKGADQT 299
Query: 310 ALYQFMGKDNAPFHTVMFPSTLLGTEENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGND 369
QFMGKDN FHTV FP TLLG+ E W + + ++ + GKFS S+ GVF D
Sbjct: 300 EYVQFMGKDNVAFHTVSFPVTLLGSGEPWKTVDKLKAFNWVTWYGGKFSTSQKRGVF-MD 358
Query: 370 VKDTNIPAEVWRYYLITNRPEVSDTLFTWEDFQAKLNTELLNNLGNFVNRVLSFIAKPPG 429
+ +P++ WR+YLI+N PE SD FTWE FQA +N++L N LGNF+NR+ + A
Sbjct: 359 QALSLLPSDYWRWYLISNAPEGSDAAFTWEGFQAAVNSDLANVLGNFINRITKYCASK-- 416
Query: 430 RGYGSIIPDSPKADLHPSTKMLAEKISNHIDQYIEAMEKVKLKQGLRIGMSISSEGNAYL 489
+ IP++ + + +A +++ + + IE E ++ ++ +I + GN YL
Sbjct: 417 --FEGKIPETGTSG--DAEAWMANELAERLPRLIEFYEAMEFRKAAAETRAIWAAGNEYL 472
Query: 490 QESQFWKLYNEDQGSCSIVIRTSVGLVYLLACLLEPFMPSFSLEVLKQLNVPTETKFSLS 549
+++ W Y D ++ +R + L + + +P +P + ++L L +P
Sbjct: 473 TKAEPWVKYKNDVDGAAVGVRAGINLAAIFGIIAQPIIPDAAKKILDALGIP-------- 524
Query: 550 DENGDLERARKP------WEILPAGHRIGMSSPLFKELKDEDVRFFREKFAGSQ 597
+EN + KP + +P GH I LF++++D V + +F G +
Sbjct: 525 EENRKMPAGSKPEDFAALLDAIPRGHAISPPDVLFQKIEDSQVEEWTAQFGGGK 578
>sp|Q166L9|SYM_ROSDO Methionine--tRNA ligase OS=Roseobacter denitrificans (strain ATCC
33942 / OCh 114) GN=metG PE=3 SV=1
Length = 572
Score = 412 bits (1058), Expect = e-114, Method: Compositional matrix adjust.
Identities = 235/595 (39%), Positives = 335/595 (56%), Gaps = 51/595 (8%)
Query: 28 LITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNALYICGTDEYGTATETKAMEEN 87
LITSA+PY+N + HLGN++G L AD++ARY R RG+ L++C TDE+GT E A +
Sbjct: 5 LITSAIPYINGIKHLGNLVGSQLPADLYARYLRARGHEVLFLCATDEHGTPAELAAAKAG 64
Query: 88 CTTQQICDKYYAIHKAVYNWFNISFDEFGRTSTPQQTEICQAIFKKLLENNWLSEYTTQQ 147
+ C + +AI + F +SFD FGR+S+ Q + Q KL E N + E +Q
Sbjct: 65 KPVDEYCAEMHAIQSEIAKGFRLSFDHFGRSSSAQNHRLTQHFAGKLDEANLIDEVIEKQ 124
Query: 148 LYCDTCKRFLADRLVEGSCPTLGCNYDSARGDQCEKCGKLLNPTELKDPRCKVCQATP-K 206
+Y RFL DR +EG+CP C YD ARGDQCE C K L+PT+L +PR + +T +
Sbjct: 125 VYSHADGRFLPDRYIEGTCPN--CAYDKARGDQCENCTKQLDPTDLIEPRSAISGSTDLE 182
Query: 207 IRDTDHLFLELPLIKDKLEEYINKMSVSGSWSQNAIQGTYAWLK--DGLKPRCITRDLKW 264
+R+T HL+L+ ++KD+L+ +I+ + W WL DGL+ R ITRDL W
Sbjct: 183 VRETKHLYLKQSVLKDQLDAWIDSKT---DWPVLTTSIAKKWLHDGDGLRDRGITRDLDW 239
Query: 265 GVPVPHEK-----FKDKVFYVWFDAPIGYISITSCYT-------PDWEEWW---KNPENV 309
G+PV + KVFYVWFDAPI YI+ S + DWE WW K ++V
Sbjct: 240 GIPVKKGTQDWPGMEGKVFYVWFDAPIEYIACASEWAEANNLEQSDWERWWRTDKGADDV 299
Query: 310 ALYQFMGKDNAPFHTVMFPSTLLGTEENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGND 369
QFMGKDN PFHT+ FP+TLLG+ E W ++ + YLNY+ G+FS S+G G+F +
Sbjct: 300 RYTQFMGKDNVPFHTLSFPATLLGSGEPWKMVDHLKSFNYLNYDGGQFSTSQGRGIFMDQ 359
Query: 370 VKDTNIPAEVWRYYLITNRPEVSDTLFTWEDFQAKLNTELLNNLGNFVNRVLSFIAK--- 426
+ +PA+ WR++L+++ PE SD+ FTWE+FQ+ +N +L + LGNFV+R+ F A
Sbjct: 360 ALEL-LPADYWRWWLLSHAPENSDSEFTWENFQSSVNKDLADVLGNFVSRITKFCAAKFG 418
Query: 427 ---PPGRGYGSIIPDSPKADLHPSTKMLAEKISNHIDQYIEAMEKVKLKQGLRIGMSISS 483
P G YGS A+L TK L E ++ + D Y+ AME K Q LR +I +
Sbjct: 419 SEVPAGGAYGS-------AELELLTK-LDESLTRYQD-YMGAMEVRKSAQELR---AIWA 466
Query: 484 EGNAYLQESQFWKLYNEDQGSCSIVIRTSVGLVYLLACLLEPFMPSFSLEVLKQLNVPTE 543
GN YLQ W ++ D + ++ R + L L L PF+P S ++LK L P+
Sbjct: 467 SGNEYLQTVAPWSVFKTDPETAAMQTRLGLNLALLFGVLSSPFVPDASEKILKCLGHPSA 526
Query: 544 TKFSLSDENGDLERARKPWEILPAGHRIGMSSPLFKELKDEDVRFFREKFAGSQA 598
D D + KP G + LF +L DED + KF+G+Q+
Sbjct: 527 ---RWPDTCTDFVTSMKP------GDPFEVPEVLFAKLTDEDRATYSAKFSGTQS 572
>sp|C4V943|SYMC_NOSCE Probable methionine--tRNA ligase, cytoplasmic OS=Nosema ceranae
(strain BRL01) GN=NCER_101052 PE=3 SV=2
Length = 560
Score = 411 bits (1056), Expect = e-114, Method: Compositional matrix adjust.
Identities = 222/530 (41%), Positives = 312/530 (58%), Gaps = 31/530 (5%)
Query: 28 LITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNALYICGTDEYGTATETKAMEEN 87
+ITSALPYVNN PHLGNIIGCVLSAD++AR+CR + +++ GTDEYGTA E A +N
Sbjct: 10 IITSALPYVNNQPHLGNIIGCVLSADMYARFCRKNNEDVVFLSGTDEYGTAIEMAAFAQN 69
Query: 88 CTTQQICDKYYAIHKAVYNWFNISFDEFGRTSTPQQTEICQAIFKKLLENNWLSEYTTQQ 147
T QIC++ IHK +Y+WFNI FD FG T++ T+ Q F K+ N + +E +Q
Sbjct: 70 KTPLQICEENRIIHKKIYDWFNIDFDFFGHTTSTAHTKNVQDFFNKIHNNGFFTEQEIEQ 129
Query: 148 LYCDTCKRFLADRLVEGSCPTLGCNYDSARGDQCEKCGKLLNPTELKDPRCKVCQATPKI 207
+CD C+ FLADR V G+C C Y A+GDQC+ CG +L D +C +C + P I
Sbjct: 130 FFCDKCQIFLADRYVVGTCKF--CKYTDAKGDQCDGCGHTYKSLDLIDAKCTLCHSFPNI 187
Query: 208 RDTDHLFLELPLIKDKLEEYINKMSVSGSWSQNAIQGTYAWLKDGLKPRCITRDLK--WG 265
+ T HLF + KDKL++ N + S WS+N Q T +WL L PRC+TRDLK WG
Sbjct: 188 KSTRHLFFDFNNFKDKLQKLFN--TNSQYWSENGKQITKSWLDQELLPRCMTRDLKNRWG 245
Query: 266 VPVPHEKFKDKVFYVWFDAPIGYISITSCYTP---DWEEWWKNP--------ENVALYQF 314
VPVP + F++KVFYVWFDA IGY + Y + +E KN ++ L QF
Sbjct: 246 VPVPLKDFEEKVFYVWFDAVIGYFTFYKEYVAARSESKELDKNNVFATDNILQDCELVQF 305
Query: 315 MGKDNAPFHTVMFPSTLLGTEENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGNDVKDTN 374
MGKDN FHT++FPS + T +++ L+K +SVTE+L +E KFSKS+G G+FG D+ D
Sbjct: 306 MGKDNVFFHTIVFPSLIFATNDSYPLIKKLSVTEFLLFENEKFSKSRGHGIFGLDLVDNT 365
Query: 375 IPAE-VWRYYLITNRPEVSDTLFTWEDFQAKLNTELLNNLGNFVNRVLSFIAKPPGRGYG 433
+ +WRYYL RPE D+ F++ F ++ +L NN+GNF NRVL +I K
Sbjct: 366 MGQSCLWRYYLAKIRPEKCDSNFSFTHFTNVIDADLNNNIGNFCNRVLKYI-KNKNDKLI 424
Query: 434 SIIPDSPKADLHPSTKMLAEKISNHIDQYIEAMEKVKLKQGLRIGMSISSEGNAYLQESQ 493
SI + DL + + I +Y+ + +++++ L + IS GN Y+Q+
Sbjct: 425 SIDKLEHRDDL------MVQTIDKIYKEYLTSFSAIRIREALEKILEISKVGNEYVQQVV 478
Query: 494 FWKLYNEDQGSCSIVIRTSVGLVYLLACLLEPFMPSFSLEVLKQLNVPTE 543
K+ + + +V L+ LLEPF+P S ++LK N E
Sbjct: 479 SSKI------EVPKGFQVAFSIVVLIGQLLEPFIPVSSEKLLKMCNRKKE 522
>sp|A8LIJ9|SYM_DINSH Methionine--tRNA ligase OS=Dinoroseobacter shibae (strain DFL 12)
GN=metG PE=3 SV=1
Length = 572
Score = 410 bits (1055), Expect = e-113, Method: Compositional matrix adjust.
Identities = 221/589 (37%), Positives = 329/589 (55%), Gaps = 39/589 (6%)
Query: 27 ILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNALYICGTDEYGTATETKAMEE 86
ILITSA+PY+N + HLGN++G L AD++ARY R RG+ ++IC TDE+GT E A +
Sbjct: 4 ILITSAIPYINGIKHLGNLVGSQLPADLYARYARARGHEVMFICATDEHGTPAELAAAKA 63
Query: 87 NCTTQQICDKYYAIHKAVYNWFNISFDEFGRTSTPQQTEICQAIFKKLLENNWLSEYTTQ 146
+ C + +A+ + F +SFD FGR+S+ + + Q KL EN + E + +
Sbjct: 64 GKPVAEYCAEMHAVQSDIAKRFGLSFDHFGRSSSERNKALTQYFAGKLAENGLIEEVSEK 123
Query: 147 QLYCDTCKRFLADRLVEGSCPTLGCNYDSARGDQCEKCGKLLNPTELKDPRCKVCQATP- 205
Q+Y RFL DR +EG+CP C YD ARGDQCE C K L+PT+L DPR + +T
Sbjct: 124 QVYSHADGRFLPDRYIEGTCPN--CGYDKARGDQCENCTKQLDPTDLIDPRSAISGSTDL 181
Query: 206 KIRDTDHLFLELPLIKDKLEEYINKMSVSGSWSQNAIQGTYAWLK--DGLKPRCITRDLK 263
++R+T HL+L +KD+L+ +I+ + W WL DGL+ R ITRDL
Sbjct: 182 EVRETKHLYLRQSALKDQLDAWIDSKT---DWPILTTSIAKKWLHDGDGLQDRGITRDLD 238
Query: 264 WGVPVPHEK-----FKDKVFYVWFDAPIGYISITSCYT-------PDWEEWW---KNPEN 308
WGVPV + KVFYVWFDAPI YI+ T+ + WE WW K +
Sbjct: 239 WGVPVKKGTEDWPGMEGKVFYVWFDAPIEYIAGTAEWADANGLDDAAWERWWRTDKGADE 298
Query: 309 VALYQFMGKDNAPFHTVMFPSTLLGTEENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGN 368
V QFMGKDN PFHT+ FP+T++G+ + W L+ I YL Y+ G+FS S+G GVF +
Sbjct: 299 VRYVQFMGKDNVPFHTLSFPATIMGSGDPWKLVDYIKSFNYLTYDGGQFSTSQGRGVFMD 358
Query: 369 DVKDTNIPAEVWRYYLITNRPEVSDTLFTWEDFQAKLNTELLNNLGNFVNRVLSFIAKPP 428
+ +PA+ WR++L+++ PE SD+ FTWE+FQA +N +L + LGNF +RV F
Sbjct: 359 QALEI-LPADYWRWWLLSHAPENSDSEFTWENFQASVNKDLADVLGNFASRVTKFCRSK- 416
Query: 429 GRGYGSIIPDSPKADLHPSTKMLAEKISNHIDQYIEAMEKVKLKQGLRIGMSISSEGNAY 488
YG +P P+ + L +++ + Y M+ +++++ +I GN Y
Sbjct: 417 ---YGEEVP--AGGAYGPAEEALIAELTTKLRAYEGHMDAMEVRKAAAELRAIWVAGNEY 471
Query: 489 LQESQFWKLYNEDQGSCSIVIRTSVGLVYLLACLLEPFMPSFSLEVLKQLNVPTETKFSL 548
LQ + W ++ D + + +IR + LV A L +PF+P S +L+ + K
Sbjct: 472 LQAAAPWSVFKTDPDAAAAIIRLGLNLVRFYAVLSQPFIPDASAALLRAM------KAED 525
Query: 549 SDENGDLERARKPWEILPAGHRIGMSSPLFKELKDEDVRFFREKFAGSQ 597
+ GD+ A LPAGH + F ++ D D + EKF+G++
Sbjct: 526 AGWPGDVAEALA---ALPAGHAFAVPEVTFAKISDADREAWAEKFSGTR 571
>sp|Q5LTL1|SYM_RUEPO Methionine--tRNA ligase OS=Ruegeria pomeroyi (strain ATCC 700808 /
DSM 15171 / DSS-3) GN=metG PE=3 SV=1
Length = 572
Score = 409 bits (1052), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/590 (37%), Positives = 336/590 (56%), Gaps = 45/590 (7%)
Query: 27 ILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNALYICGTDEYGTATETKAMEE 86
ILITSA+PY+N + HLGN++G L AD++ARY R RG +++C TDE+GT E A +
Sbjct: 4 ILITSAIPYINGIKHLGNLVGSQLPADLYARYQRGRGNEVMFLCATDEHGTPAELAAAKA 63
Query: 87 NCTTQQICDKYYAIHKAVYNWFNISFDEFGRTSTPQQTEICQAIFKKLLENNWLSEYTTQ 146
+ C + + + + F +SFD FGR+S+ Q ++ Q KL EN+ + E + +
Sbjct: 64 GKPVAEYCAEMHGVQADIARRFGLSFDHFGRSSSAQNHKLTQHFAGKLAENDLIREVSER 123
Query: 147 QLYCDTCKRFLADRLVEGSCPTLGCNYDSARGDQCEKCGKLLNPTELKDPRCKVCQATP- 205
Q+Y + RFL DR +EG+CP C YD ARGDQCE C K L+PT+L +PR + +T
Sbjct: 124 QVYSNADGRFLPDRYIEGTCPN--CGYDKARGDQCENCTKQLDPTDLIEPRSAISGSTDL 181
Query: 206 KIRDTDHLFLELPLIKDKLEEYINKMSVSGSWSQNAIQGTYAWLK--DGLKPRCITRDLK 263
++R+T HL+L +KD+L+ +I+ + W WL DGL+ R ITRDL
Sbjct: 182 EVRETKHLYLRQSALKDQLDAWIDSKA---DWPVLTTSIAKKWLHDGDGLQDRGITRDLD 238
Query: 264 WGVPVPHEK-----FKDKVFYVWFDAPIGYISITSCYT-------PDWEEWW---KNPEN 308
WG+PV + + KVFYVWFDAPI YI+ + +WE WW K ++
Sbjct: 239 WGIPVKKGEQDWPGMEGKVFYVWFDAPIEYIACAGEWAEAHGKSDAEWERWWRTDKGADD 298
Query: 309 VALYQFMGKDNAPFHTVMFPSTLLGTEENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGN 368
V QFMGKDN PFHT+ FP+TL+G+ E W ++ + YLNY+ G+FS S+G GVF +
Sbjct: 299 VRYVQFMGKDNVPFHTLSFPATLIGSGEPWKMVDHLKSFNYLNYDGGQFSTSQGRGVFMD 358
Query: 369 DVKDTNIPAEVWRYYLITNRPEVSDTLFTWEDFQAKLNTELLNNLGNFVNRVLSFIAKPP 428
+ +PA+ WR++L+++ PE SD+ FTWE+FQA +N +L + LGNFV+R+ F
Sbjct: 359 QALEI-LPADYWRWWLLSHAPENSDSEFTWENFQASVNKDLADVLGNFVSRITKFCRSK- 416
Query: 429 GRGYGSIIPDSPKADLHPSTKMLAEKISNHIDQY---IEAMEKVKLKQGLRIGMSISSEG 485
+G +P+ P + L +++ + Y +EAME K Q LR +I + G
Sbjct: 417 ---FGEEVPEG--GAYGPQEEALIAELTTRLRAYEGHMEAMEVRKSAQELR---AIWAAG 468
Query: 486 NAYLQESQFWKLYNEDQGSCSIVIRTSVGLVYLLACLLEPFMPSFSLEVLKQLNVPTETK 545
N YLQ + W L+ D + +R + L+ L A L PF+P+ S +L+ +
Sbjct: 469 NEYLQSAAPWTLFKTDPVQAAAQVRLGLNLIRLYAVLSAPFIPAASARMLEAMQT----- 523
Query: 546 FSLSDENGDLERARKPWEILPAGHRIGMSSPLFKELKDEDVRFFREKFAG 595
SD+N ++ A + P GH + LF ++ DED ++++FAG
Sbjct: 524 ---SDDNWPVDIATALNALAP-GHAFTVPEVLFAKISDEDREGWQQRFAG 569
>sp|Q3J0T3|SYM_RHOS4 Methionine--tRNA ligase OS=Rhodobacter sphaeroides (strain ATCC
17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=metG PE=3 SV=1
Length = 572
Score = 409 bits (1050), Expect = e-113, Method: Compositional matrix adjust.
Identities = 226/592 (38%), Positives = 334/592 (56%), Gaps = 43/592 (7%)
Query: 27 ILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNALYICGTDEYGTATETKAMEE 86
ILITSA+PY+N + HLGN++G L AD++ARY R RG+ ++IC TDE+GT E A +
Sbjct: 4 ILITSAIPYINGIKHLGNLVGSQLPADLYARYMRGRGHEVMFICATDEHGTPAELAAAKA 63
Query: 87 NCTTQQICDKYYAIHKAVYNWFNISFDEFGRTSTPQQTEICQAIFKKLLENNWLSEYTTQ 146
+ C + + + K + F +SFD FGR+S+ + + Q L EN ++ E +
Sbjct: 64 GKPVEDYCAEMHEVQKEIAAGFRLSFDHFGRSSSARNHRLTQHFAGALAENGFIEEVVER 123
Query: 147 QLYCDTCKRFLADRLVEGSCPTLGCNYDSARGDQCEKCGKLLNPTELKDPRCKVCQATP- 205
Q + RFL DR +EG+CP C YD ARGDQCE C K L+PT+L DPR + +T
Sbjct: 124 QFFSVADNRFLPDRYIEGTCPN--CGYDKARGDQCENCTKQLDPTDLIDPRSAISGSTEL 181
Query: 206 KIRDTDHLFLELPLIKDKLEEYINKMSVSGSWSQNAIQGTYAWLKD--GLKPRCITRDLK 263
++R+T HL+L +KD++E +I+ + W WL D GL+ R ITRDLK
Sbjct: 182 ELRETKHLYLRQRALKDEIEAWIDSKT---DWPVLTTSIAKKWLHDGEGLQDRGITRDLK 238
Query: 264 WGVPV-----PHEKFKDKVFYVWFDAPIGYISITSCYT-------PDWEEWW---KNPEN 308
WGVPV P + KVFYVWFDAPI YI+ T+ + DWE WW + E+
Sbjct: 239 WGVPVRKGSEPWPGMEGKVFYVWFDAPIEYIAGTAEWADANGKADADWERWWRTDRGAED 298
Query: 309 VALYQFMGKDNAPFHTVMFPSTLLGTEENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGN 368
V QFMGKDN PFHT+ FP+T++G+ E W L+ I YLNY+ G+FS S+G GVF
Sbjct: 299 VRYVQFMGKDNVPFHTLSFPATIMGSREPWKLVDYIKSFNYLNYDGGQFSTSQGRGVF-M 357
Query: 369 DVKDTNIPAEVWRYYLITNRPEVSDTLFTWEDFQAKLNTELLNNLGNFVNRVLSFIAKPP 428
D + +PA+ WR++L+++ PE SD+ FTWE+FQ+ +N +L + LGN V+RV F
Sbjct: 358 DQALSILPADYWRWWLLSHAPENSDSEFTWENFQSSVNKDLADVLGNLVSRVTKFCRSK- 416
Query: 429 GRGYGSIIP--DSPKADLHPSTKMLAEKISNHIDQYIEAMEKVKLKQGLRIGMSISSEGN 486
+G +P SP H L ++++ + + +EAME K LR ++ GN
Sbjct: 417 ---FGETVPAGGSPGEREHQLVAELQQRLAAY-EACMEAMEVRKAASELR---ALWVAGN 469
Query: 487 AYLQESQFWKLYNEDQGSCSIVIRTSVGLVYLLACLLEPFMPSFSLEVLKQLNVPTETKF 546
YLQ + W + D +IR ++ L+ L A + PF+P + ++ L +
Sbjct: 470 EYLQSAAPWTVVKTDPEQAQAMIRLALNLIRLYAVISRPFIPDAAASMMASLGCEDWSW- 528
Query: 547 SLSDENGDLERARKPWEILPAGHRIGMSSPLFKELKDEDVRFFREKFAGSQA 598
D+ RA E+LPAGH LF+++ DE+ ++ +F+G ++
Sbjct: 529 -----PADVGRAL---EVLPAGHGFTTPEVLFRKITDEERAEWQTRFSGVRS 572
>sp|A3PLG8|SYM_RHOS1 Methionine--tRNA ligase OS=Rhodobacter sphaeroides (strain ATCC
17029 / ATH 2.4.9) GN=metG PE=3 SV=1
Length = 572
Score = 408 bits (1049), Expect = e-113, Method: Compositional matrix adjust.
Identities = 226/592 (38%), Positives = 334/592 (56%), Gaps = 43/592 (7%)
Query: 27 ILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNALYICGTDEYGTATETKAMEE 86
ILITSA+PY+N + HLGN++G L AD++ARY R RG+ ++IC TDE+GT E A +
Sbjct: 4 ILITSAIPYINGIKHLGNLVGSQLPADLYARYMRGRGHEVMFICATDEHGTPAELAAAKA 63
Query: 87 NCTTQQICDKYYAIHKAVYNWFNISFDEFGRTSTPQQTEICQAIFKKLLENNWLSEYTTQ 146
+ C + + + K + F +SFD FGR+S+ + + Q L EN ++ E +
Sbjct: 64 GKPVEDYCAEMHEVQKEIAAGFRLSFDHFGRSSSARNHRLTQHFAGALAENGFIEEVVER 123
Query: 147 QLYCDTCKRFLADRLVEGSCPTLGCNYDSARGDQCEKCGKLLNPTELKDPRCKVCQATP- 205
Q + RFL DR +EG+CP C YD ARGDQCE C K L+PT+L DPR + +T
Sbjct: 124 QFFSVADNRFLPDRYIEGTCPN--CGYDKARGDQCENCTKQLDPTDLIDPRSAISGSTEL 181
Query: 206 KIRDTDHLFLELPLIKDKLEEYINKMSVSGSWSQNAIQGTYAWLKD--GLKPRCITRDLK 263
++R+T HL+L +KD++E +I+ + W WL D GL+ R ITRDLK
Sbjct: 182 ELRETKHLYLRQRALKDEIEAWIDSKT---DWPVLTTSIAKKWLHDGEGLQDRGITRDLK 238
Query: 264 WGVPV-----PHEKFKDKVFYVWFDAPIGYISITSCYT-------PDWEEWW---KNPEN 308
WGVPV P + KVFYVWFDAPI YI+ T+ + DWE WW + E+
Sbjct: 239 WGVPVRKGSEPWPGMEGKVFYVWFDAPIEYIAGTAEWADANGKTDADWERWWRTDRGAED 298
Query: 309 VALYQFMGKDNAPFHTVMFPSTLLGTEENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGN 368
V QFMGKDN PFHT+ FP+T++G+ E W L+ I YLNY+ G+FS S+G GVF
Sbjct: 299 VRYVQFMGKDNVPFHTLSFPATIMGSREPWKLVDYIKSFNYLNYDGGQFSTSQGRGVF-M 357
Query: 369 DVKDTNIPAEVWRYYLITNRPEVSDTLFTWEDFQAKLNTELLNNLGNFVNRVLSFIAKPP 428
D + +PA+ WR++L+++ PE SD+ FTWE+FQ+ +N +L + LGN V+RV F
Sbjct: 358 DQALSILPADYWRWWLLSHAPENSDSEFTWENFQSSVNKDLADVLGNLVSRVTKFCRSK- 416
Query: 429 GRGYGSIIP--DSPKADLHPSTKMLAEKISNHIDQYIEAMEKVKLKQGLRIGMSISSEGN 486
+G +P SP H L ++++ + + +EAME K LR ++ GN
Sbjct: 417 ---FGETVPAGGSPGEREHQLVAELQQRLAAY-EACMEAMEVRKAASELR---ALWVAGN 469
Query: 487 AYLQESQFWKLYNEDQGSCSIVIRTSVGLVYLLACLLEPFMPSFSLEVLKQLNVPTETKF 546
YLQ + W + D +IR ++ L+ L A + PF+P + ++ L +
Sbjct: 470 EYLQSAAPWTVVKTDPEQAQAMIRLALNLIRLYAVISRPFIPDAAASMMTSLGCEDWSW- 528
Query: 547 SLSDENGDLERARKPWEILPAGHRIGMSSPLFKELKDEDVRFFREKFAGSQA 598
D+ RA E+LPAGH LF+++ DE+ ++ +F+G ++
Sbjct: 529 -----PADVGRAL---EVLPAGHGFTTPEVLFRKITDEERAEWQTRFSGVRS 572
>sp|B9KKH3|SYM_RHOSK Methionine--tRNA ligase OS=Rhodobacter sphaeroides (strain KD131 /
KCTC 12085) GN=metG PE=3 SV=1
Length = 572
Score = 406 bits (1043), Expect = e-112, Method: Compositional matrix adjust.
Identities = 225/589 (38%), Positives = 331/589 (56%), Gaps = 43/589 (7%)
Query: 27 ILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNALYICGTDEYGTATETKAMEE 86
ILITSA+PY+N + HLGN++G L AD++ARY R RG+ ++IC TDE+GT E A +
Sbjct: 4 ILITSAIPYINGIKHLGNLVGSQLPADLYARYMRGRGHEVMFICATDEHGTPAELAAAKA 63
Query: 87 NCTTQQICDKYYAIHKAVYNWFNISFDEFGRTSTPQQTEICQAIFKKLLENNWLSEYTTQ 146
+ C + + + K + F +SFD FGR+S+ + + Q L EN ++ E +
Sbjct: 64 GKPVEDYCAEMHEVQKEIAAGFRLSFDHFGRSSSARNHRLTQHFAGALAENGFIEEVVER 123
Query: 147 QLYCDTCKRFLADRLVEGSCPTLGCNYDSARGDQCEKCGKLLNPTELKDPRCKVCQATP- 205
Q + RFL DR +EG+CP C YD ARGDQCE C K L+PT+L DPR + +T
Sbjct: 124 QFFSVADNRFLPDRYIEGTCPN--CGYDKARGDQCENCTKQLDPTDLIDPRSAISGSTEL 181
Query: 206 KIRDTDHLFLELPLIKDKLEEYINKMSVSGSWSQNAIQGTYAWLKD--GLKPRCITRDLK 263
++R+T HL+L +KD++E +I+ + W WL D GL+ R ITRDLK
Sbjct: 182 ELRETKHLYLRQRALKDEIEAWIDSKT---DWPVLTTSIAKKWLHDGEGLQDRGITRDLK 238
Query: 264 WGVPV-----PHEKFKDKVFYVWFDAPIGYISITSCYT-------PDWEEWW---KNPEN 308
WGVPV P + KVFYVWFDAPI YI+ T+ + DWE WW + E+
Sbjct: 239 WGVPVRKGSEPWPGMEGKVFYVWFDAPIEYIAGTAEWADANGKADADWERWWRTDRGAED 298
Query: 309 VALYQFMGKDNAPFHTVMFPSTLLGTEENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGN 368
V QFMGKDN PFHT+ FP+T++G+ E W L+ I YLNY+ G+FS S+G GVF
Sbjct: 299 VRYVQFMGKDNVPFHTLSFPATIMGSREPWKLVDYIKSFNYLNYDGGQFSTSQGRGVF-M 357
Query: 369 DVKDTNIPAEVWRYYLITNRPEVSDTLFTWEDFQAKLNTELLNNLGNFVNRVLSFIAKPP 428
D + +PA+ WR++L+++ PE SD+ FTWE+FQ+ +N +L + LGN V+RV F
Sbjct: 358 DQALSILPADYWRWWLLSHAPENSDSEFTWENFQSSVNKDLADVLGNLVSRVTKFCRSK- 416
Query: 429 GRGYGSIIP--DSPKADLHPSTKMLAEKISNHIDQYIEAMEKVKLKQGLRIGMSISSEGN 486
+G +P SP H L ++++ + + +EAME K LR ++ GN
Sbjct: 417 ---FGETVPAGGSPGEREHQLVAELQQQLAAY-ETCMEAMEVRKAAAELR---ALWVAGN 469
Query: 487 AYLQESQFWKLYNEDQGSCSIVIRTSVGLVYLLACLLEPFMPSFSLEVLKQLNVPTETKF 546
YLQ + W + D +IR ++ L+ L A + PF+P + ++ L +
Sbjct: 470 EYLQSAAPWTVVKTDPEQAQAMIRLALNLIRLYAVISRPFIPDAAASMMASLGCEDWSW- 528
Query: 547 SLSDENGDLERARKPWEILPAGHRIGMSSPLFKELKDEDVRFFREKFAG 595
D+ RA E+LP GH LF+++ DE+ ++ +F+G
Sbjct: 529 -----PADVGRAL---EVLPPGHGFTTPEVLFRKITDEERAEWQTRFSG 569
>sp|B0T3J0|SYM_CAUSK Methionine--tRNA ligase OS=Caulobacter sp. (strain K31) GN=metG
PE=3 SV=1
Length = 569
Score = 404 bits (1039), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/585 (38%), Positives = 321/585 (54%), Gaps = 33/585 (5%)
Query: 27 ILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNALYICGTDEYGTATETKAMEE 86
ILITSALPY+N V HLGN+ G +L ADV+AR+ R RG + LYIC TDE+GT E A
Sbjct: 4 ILITSALPYINGVKHLGNLAGSMLPADVYARFQRARGNDTLYICATDEHGTPAELAAAAA 63
Query: 87 NCTTQQICDKYYAIHKAVYNWFNISFDEFGRTSTPQQTEICQAIFKKLLENNWLSEYTTQ 146
+ C + + + V F +S+D FGR+S+PQ + Q + L E + E Q
Sbjct: 64 GQDVAEYCAEQHVLQHDVGRAFGLSWDHFGRSSSPQNHRLTQHFCEVLEERGLIEERVDQ 123
Query: 147 QLYCDTCKRFLADRLVEGSCPTLGCNYDSARGDQCEKCGKLLNPTELKDPRCKVCQA-TP 205
+Y RFL DR +EG+CP C +D ARGDQC+ CG LL+PTELKDP + +
Sbjct: 124 MVYSIDDARFLPDRYIEGTCPH--CGFDKARGDQCDNCGNLLDPTELKDPYSVISGSRNL 181
Query: 206 KIRDTDHLFLELPLIKDKLEEYINKMSVSGSWSQNAIQGTYAWLKDGLKPRCITRDLKWG 265
++RDT HL+L + DK+ +I+ W A Y L +GL R ITRDL WG
Sbjct: 182 EVRDTRHLYLLQTKMADKIRAWIDSHP---DWQLLAKSIAYKHLDEGLIDRGITRDLAWG 238
Query: 266 VPV-----PHEKFKDKVFYVWFDAPIGYISITSCYTP-----DWEEWWKNPE---NVALY 312
+PV P F+DKVFYVWFDAPI YI+ T + DW+ WW+ E +V
Sbjct: 239 IPVTKGEFPRPGFEDKVFYVWFDAPIEYIAATQEWADEGAGRDWKSWWRTDEGADDVRYV 298
Query: 313 QFMGKDNAPFHTVMFPSTLLGTEENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGNDVKD 372
QFMGKDN FHTV FP+T+LG++E W + + +LN+ GKFS S GVF D
Sbjct: 299 QFMGKDNVAFHTVSFPATILGSQEPWKSVDMLKAFNWLNWYGGKFSTSNKRGVF-MDAAL 357
Query: 373 TNIPAEVWRYYLITNRPEVSDTLFTWEDFQAKLNTELLNNLGNFVNRVLSFIAKPPGRGY 432
+P + WR+YL +N PE SDT FTWE F + +N +L + LGNFVNR+L F +
Sbjct: 358 EILPPDFWRWYLTSNAPESSDTAFTWEQFASAVNRDLADVLGNFVNRILKFTEGK----F 413
Query: 433 GSIIPDSPKADLHPSTKMLAEKISNHIDQYIEAMEKVKLKQGLRIGMSISSEGNAYLQES 492
+IPD P + L +S + E M+ V++++ + ++ GN YLQE+
Sbjct: 414 DGVIPDGGAPG--PLEEKLYADVSARLADLTEQMDAVEVRKSAQALRALWVVGNEYLQEA 471
Query: 493 QFWKLYNEDQGSCSIVIRTSVGLVYLLACLLEPFMPSFSLEVLKQLNVPTETKFSLSDEN 552
W D+ ++++RT++ L L A + PF+P + ++ + +P + +D
Sbjct: 472 APWTAIKTDRDRAAVIVRTALNLAALYARISAPFIPFAAEKIGEAFQLPWPPVWPTTDAA 531
Query: 553 GDLERARKPWEILPAGHRIGMSSPLFKELKDEDVRFFREKFAGSQ 597
+L LP G + LFK+++DE + + +F G++
Sbjct: 532 AELSS-------LPVGLSVRAPEVLFKKIEDEQIAEWTRRFGGAE 569
>sp|A4WV24|SYM_RHOS5 Methionine--tRNA ligase OS=Rhodobacter sphaeroides (strain ATCC
17025 / ATH 2.4.3) GN=metG PE=3 SV=1
Length = 572
Score = 403 bits (1035), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/592 (37%), Positives = 330/592 (55%), Gaps = 49/592 (8%)
Query: 27 ILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNALYICGTDEYGTATETKAMEE 86
ILITSA+PY+N + HLGN++G L AD++ARY R RG+ ++IC TDE+GT E A +
Sbjct: 4 ILITSAIPYINGIKHLGNLVGSQLPADLYARYMRGRGHEVMFICATDEHGTPAELAAAKA 63
Query: 87 NCTTQQICDKYYAIHKAVYNWFNISFDEFGRTSTPQQTEICQAIFKKLLENNWLSEYTTQ 146
+ C + + I K + F +SFD FGR+S+ + + Q +L EN ++ E + +
Sbjct: 64 GKPVEVYCAEMHEIQKEIAAGFRLSFDHFGRSSSARNHRLTQHFAGQLAENGFIEEVSER 123
Query: 147 QLYCDTCKRFLADRLVEGSCPTLGCNYDSARGDQCEKCGKLLNPTELKDPRCKVCQATP- 205
Q++ RFL DR +EG+CP C YD ARGDQCE C K L+PT+L +PR + +T
Sbjct: 124 QVFSVADNRFLPDRYIEGTCPN--CGYDKARGDQCENCTKQLDPTDLINPRSAISGSTDL 181
Query: 206 KIRDTDHLFLELPLIKDKLEEYINKMSVSGSWSQNAIQGTYAWLKD--GLKPRCITRDLK 263
++R+T HL+L +KD++E +I+ + W WL D GL+ R ITRDL
Sbjct: 182 EVRETKHLYLRQRALKDEIEAWIDSKT---DWPVLTTSIAKKWLHDGEGLQDRGITRDLH 238
Query: 264 WGVPV-----PHEKFKDKVFYVWFDAPIGYISITSCYT-------PDWEEWW---KNPEN 308
WGVPV P + KVFYVWFDAPI YI+ T+ + DWE WW K +
Sbjct: 239 WGVPVKKGDQPWPGMEGKVFYVWFDAPIEYIAGTAEWADANGKTEADWERWWRTDKGAGD 298
Query: 309 VALYQFMGKDNAPFHTVMFPSTLLGTEENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGN 368
V QFMGKDN PFHT+ FP+T++G+ E W L+ I YLNY+ G+FS S+G GVF
Sbjct: 299 VRYVQFMGKDNVPFHTLSFPATIMGSREPWKLVDYIKSFNYLNYDGGQFSTSQGRGVF-M 357
Query: 369 DVKDTNIPAEVWRYYLITNRPEVSDTLFTWEDFQAKLNTELLNNLGNFVNRVLSFIAKPP 428
D + +PA+ WR++L+++ PE SD+ FTWE+FQA +N +L + LGN V+RV F
Sbjct: 358 DQALSILPADYWRWWLLSHAPENSDSEFTWENFQASVNKDLADVLGNLVSRVTKFCRSK- 416
Query: 429 GRGYGSIIPDSPKADLHPSTKMLAEKISNHIDQYIEAMEKVKLKQGLRIGMSISSEGNAY 488
+G +P + A +++AE + + Y ME +++++ ++ GN Y
Sbjct: 417 ---FGETVP-AGGAFGEREHQLIAE-LQERLAAYESCMEAMEIRKAATELRALWVAGNEY 471
Query: 489 LQESQFWKLYNEDQGSCSIVIRTSVGLVYLLACLLEPFMPSFSLEVLKQLNV-----PTE 543
LQ + W + D +IR S+ L+ L A + PF+P + + L PT+
Sbjct: 472 LQSAAPWTVVKTDPERAQAMIRLSLNLIRLYAVISRPFIPDAAASTMASLGCDDWSWPTD 531
Query: 544 TKFSLSDENGDLERARKPWEILPAGHRIGMSSPLFKELKDEDVRFFREKFAG 595
+L E LPAGH LF+++ DE+ ++ +FAG
Sbjct: 532 VAAAL--------------ERLPAGHAFTTPDVLFRKITDEERAEWQTRFAG 569
>sp|Q1GEI7|SYM_RUEST Methionine--tRNA ligase OS=Ruegeria sp. (strain TM1040) GN=metG
PE=3 SV=2
Length = 573
Score = 400 bits (1028), Expect = e-110, Method: Compositional matrix adjust.
Identities = 224/593 (37%), Positives = 333/593 (56%), Gaps = 45/593 (7%)
Query: 27 ILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNALYICGTDEYGTATETKAMEE 86
ILITSALPY+N + HLGN++G L AD++ARY R RG+ +++C TDE+GT E A +
Sbjct: 4 ILITSALPYINGIKHLGNLVGSQLPADLYARYNRGRGHEVMFLCATDEHGTPAELAAAKA 63
Query: 87 NCTTQQICDKYYAIHKAVYNWFNISFDEFGRTSTPQQTEICQAIFKKLLENNWLSEYTTQ 146
C + +A+ + F +SFD +GR+S+PQ + Q KL E ++E + +
Sbjct: 64 GKPVADYCAEMHAVQADIAKRFGLSFDHYGRSSSPQNHALTQHFAGKLEEAGLITEVSEK 123
Query: 147 QLYCDTCKRFLADRLVEGSCPTLGCNYDSARGDQCEKCGKLLNPTELKDPRCKVCQATP- 205
Q+Y + RFL DR +EG+CP C ++ ARGDQCE+C K L+PT+L +PR + +T
Sbjct: 124 QVYSNADGRFLPDRYIEGTCPN--CGFEKARGDQCEECTKQLDPTDLINPRSAISGSTDL 181
Query: 206 KIRDTDHLFLELPLIKDKLEEYINKMSVSGSWSQNAIQGTYAWLK--DGLKPRCITRDLK 263
++R+T HLFL ++D+L+++I+ + W WL DGL+ R ITRDL
Sbjct: 182 EVRETKHLFLRQSAMRDQLDQWIDSKT---DWPVLTTSIAKKWLHDGDGLQDRGITRDLD 238
Query: 264 WGVPVPHEK-----FKDKVFYVWFDAPIGYISITSCYT-------PDWEEWW---KNPEN 308
WG+ V + KVFYVWFDAPI YI+ + DWE WW K ++
Sbjct: 239 WGIAVKKGDADWPGMEGKVFYVWFDAPIEYIAAAGEWAEAHGKTDADWERWWRTDKGADD 298
Query: 309 VALYQFMGKDNAPFHTVMFPSTLLGTEENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGN 368
V QFMGKDN PFHT+ FP+TLLG+ E W ++ + YLNY+ G+FS S+G GVF +
Sbjct: 299 VKYVQFMGKDNVPFHTLSFPATLLGSGEPWKMVDHLKSFNYLNYDGGQFSTSQGRGVFMD 358
Query: 369 DVKDTNIPAEVWRYYLITNRPEVSDTLFTWEDFQAKLNTELLNNLGNFVNRVLSFIAKPP 428
+ +PA+ WR++L+++ PE SD+ FTWE+FQ +N +L + LGNFV+R+ F
Sbjct: 359 QALEI-LPADYWRWWLLSHAPESSDSEFTWENFQQSVNKDLADVLGNFVSRITKFCRSK- 416
Query: 429 GRGYGSIIPDSPKADLHPSTKMLAEKISNHI---DQYIEAMEKVKLKQGLRIGMSISSEG 485
+G +PD T L E++S I ++++EAME K Q LR +I G
Sbjct: 417 ---FGEEVPDGGTWGEQEQT--LIEELSTRIGAFERHMEAMEVRKSAQELR---AIWVAG 468
Query: 486 NAYLQESQFWKLYNEDQGSCSIVIRTSVGLVYLLACLLEPFMPSFSLEVLKQLNVPTETK 545
N YLQ + W ++ ED + +R + L+ L A L PF+P S + L
Sbjct: 469 NEYLQSAAPWSVFKEDPERAAGQVRLGLNLIRLYAVLSAPFIPDASDRLFAALG------ 522
Query: 546 FSLSDENGDLERARKPWEILPAGHRIGMSSPLFKELKDEDVRFFREKFAGSQA 598
+++ E LPAGH + LF ++ DE ++E+FAG ++
Sbjct: 523 ---TEDRSWPEDVAAALAALPAGHAFTVPEVLFAKITDEQREEWQERFAGGRS 572
>sp|A2BLU2|SYM_HYPBU Methionine--tRNA ligase OS=Hyperthermus butylicus (strain DSM 5456
/ JCM 9403) GN=metG PE=3 SV=1
Length = 572
Score = 399 bits (1026), Expect = e-110, Method: Compositional matrix adjust.
Identities = 214/560 (38%), Positives = 323/560 (57%), Gaps = 27/560 (4%)
Query: 28 LITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNALYICGTDEYGTATETKAMEEN 87
++ SA PYVN++PHLGN+IG +LSADVFARY RL+G + +++ G+DE+GT E +A+
Sbjct: 5 IVASAWPYVNSIPHLGNLIGSILSADVFARYLRLKGEDVVFVSGSDEHGTPIEVEAIRRG 64
Query: 88 CTTQQICDKYYAIHKAVYNWFNISFDEFGRTSTPQQTEICQAIFKKLLENNWLSEYTTQQ 147
+Q+ D+ + K ++ F ISFD + RT P E + KL +N ++ E
Sbjct: 65 VHPKQLTDQAHEYVKKLFEEFRISFDNYTRTENPVHKEFVREFMMKLYQNGYIFEQDDVL 124
Query: 148 LYCDTCKRFLADRLVEGSCPTLGCNYDSARGDQCEKCGKLLNPTELKDPRCKVCQATPKI 207
YC K FL DR V G+CP C ++ A GDQC+ CG+LL+PTELK+PRC +C +
Sbjct: 125 PYCPRDKMFLPDRFVVGTCPY--CGFEKAYGDQCDNCGRLLHPTELKNPRCSICGGPVEF 182
Query: 208 RDTDHLFLELPLIKDKLEEYINKMSVSGSWSQNAIQGTYAWLKDGLKPRCITRDLKWGVP 267
R + H F LP +++K+E+++ + ++ N + LK+GLKPR +TRD KWG+P
Sbjct: 183 RKSKHWFFNLPKLQEKVEKWLRESNL----PPNVKNYSLNMLKEGLKPRSVTRDNKWGIP 238
Query: 268 VPHEKFKDKVFYVWFDAPIGYISITSCY-----TPD-WEEWWKNPENVALYQFMGKDNAP 321
P + K YVWFDA +GYIS T Y P+ W+++W NPE +Y F+GKDN P
Sbjct: 239 APFPGAEGKTIYVWFDALLGYISATKEYGLKKGDPELWKKYWFNPETKTVY-FIGKDNIP 297
Query: 322 FHTVMFPSTLLGTEENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGNDVKDTNIPAEVWR 381
FH ++ P+ L+G+ + + L IS TEYL YE +FSKS+ G++ ++ + +PA+ WR
Sbjct: 298 FHAIILPAMLIGSGDPYVLPSYISATEYLMYEGEQFSKSRRWGIWIDEALEI-LPADYWR 356
Query: 382 YYLITNRPEVSDTLFTWEDFQAKLNTELLNNLGNFVNRVLSFIAKPPGRGYGSIIPDSPK 441
+ LI RPE DT FTW +F +NTE+ +++GN+V+RVL FI +GS++P+
Sbjct: 357 FALIRMRPEAKDTNFTWSEFLRIVNTEMNDDIGNYVHRVLRFIES----KFGSVVPEP-- 410
Query: 442 ADLHPSTKMLAEKISNHIDQYIEAMEKVKLKQGLRIGMSISSEGNAYLQESQFWKLYNED 501
+ K + I + + E+V+LKQ L + ++ +GN YL W D
Sbjct: 411 GSYSDADKEFEKAIRETPRRAEKYFEEVRLKQALGEVIELARKGNQYLNTKAPWDKIKTD 470
Query: 502 QGSCSIVIRTSVGLVYLLACLLEPFMPSFSLEVLKQLNVPTETKFSLSDENGDLERARKP 561
+ + +V V LA LL PF P + + K LN+P E G ++A +
Sbjct: 471 PKDAATTMYLAVNSVATLAILLAPFTPDSAERLWKMLNLPGSV-----HEPGRWKQAGE- 524
Query: 562 WEILPAGHRIGMSSPLFKEL 581
I+ GHRIG LF++L
Sbjct: 525 -MIIKPGHRIGKPEQLFRKL 543
>sp|Q9YCY3|SYM_AERPE Methionine--tRNA ligase OS=Aeropyrum pernix (strain ATCC 700893 /
DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=metG PE=3
SV=1
Length = 572
Score = 398 bits (1022), Expect = e-110, Method: Compositional matrix adjust.
Identities = 214/564 (37%), Positives = 323/564 (57%), Gaps = 29/564 (5%)
Query: 28 LITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNALYICGTDEYGTATETKAMEEN 87
++TSA PYVN+VPHLG +IG VLSAD++ARY RLRG +++ G+DE+GT E +A ++
Sbjct: 5 VVTSAWPYVNHVPHLGTLIGSVLSADIYARYLRLRGRQVVFVSGSDEHGTPIELEARKKG 64
Query: 88 CTTQQICDKYYAIHKAVYNWFNISFDEFGRTSTPQQTEICQAIFKKLLENNWLSEYTTQQ 147
+++ D+ + ++ + ISFD + RT +P E KKL EN ++
Sbjct: 65 VHPKELTDQVHEYDVKMWREYRISFDNYSRTESPVHKEFVMEFMKKLEENGYIFSQEEVL 124
Query: 148 LYCDTCKRFLADRLVEGSCPTLGCNYDSARGDQCEKCGKLLNPTELKDPRCKVCQATPKI 207
YC+ K FL DR VEG+CP C Y+ ARGDQC++CG+LL+PTELK+PRC +C + P
Sbjct: 125 PYCERDKIFLPDRFVEGTCPY--CGYEKARGDQCDECGRLLHPTELKNPRCALCGSKPVY 182
Query: 208 RDTDHLFLELPLIKDKLEEYINKMSVSGSWSQNAIQGTYAWLKDGLKPRCITRDLKWGVP 267
+ T H F++L ++D+L +++ G + + + W+ GLKPR +TRDL WGVP
Sbjct: 183 KSTRHWFIDLRRVQDRLLKWLES---HGELQDSVKKYSINWVAQGLKPRSVTRDLSWGVP 239
Query: 268 VPHEKFKDKVFYVWFDAPIGYISITSCY-------TPDWEEWWKNPENVALYQFMGKDNA 320
P + + K YVWFDA +GY+S T +W+ WW + +Y F+GKDN
Sbjct: 240 APFKGAEGKTIYVWFDALLGYVSATKELFIMRRGDPEEWKSWWWDSGTRTVY-FIGKDNI 298
Query: 321 PFHTVMFPSTLLGTEENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGNDVKDTNIPAEVW 380
PFH ++ P+ L + + + L IS TEYL YE +FSKS+ +GV+ ++ + PA+ W
Sbjct: 299 PFHAIILPALFLASHDPYVLPWRISATEYLMYEGQQFSKSRRIGVWIDEALEIA-PADYW 357
Query: 381 RYYLITNRPEVSDTLFTWEDFQAKLNTELLNNLGNFVNRVLSFIAKPPGRGYGSIIPDSP 440
R+ L RPE DT FTW++F +NTEL +++GNFVNRVLS + R S + P
Sbjct: 358 RWALARMRPEARDTNFTWKEFYRIVNTELNDDIGNFVNRVLSLV-----RSRMSGVAPEP 412
Query: 441 KADLHPSTKMLAEKISNHIDQYIEAMEKVKLKQGLRIGMSISSEGNAYLQESQFWKLYNE 500
+ DL + E++ E +E +++K+ + I+ EGNAYL +Q WKL ++
Sbjct: 413 E-DLG-EHQGFVERVRRAAWAVAEDLEAIRIKRATEGILEIAREGNAYLNRTQPWKLLSQ 470
Query: 501 DQGSCSIVIRTSVGLVYLLACLLEPFMPSFSLEVLKQLNVPTETKFSLSDENGDLERARK 560
D+ + ++ V LA LL PF P + + L + ++ DE D +
Sbjct: 471 DREEGVRALSAALYAVKTLAHLLAPFTPDAADRLWSMLGLAGSVHEAVWDEWLD-----R 525
Query: 561 PWEILPAGHRIGMSSPLFKELKDE 584
P LP G RI PLF++L D+
Sbjct: 526 P---LPGGARIVRVEPLFQKLPDD 546
>sp|Q28MK0|SYM_JANSC Methionine--tRNA ligase OS=Jannaschia sp. (strain CCS1) GN=metG
PE=3 SV=1
Length = 570
Score = 393 bits (1009), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/588 (35%), Positives = 315/588 (53%), Gaps = 48/588 (8%)
Query: 28 LITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNALYICGTDEYGTATETKAMEEN 87
LITSA+PY+N + HLGN++G L AD++ARY R RG L++C TDE+GT E A +
Sbjct: 8 LITSAIPYINGIKHLGNLVGSQLPADLYARYLRARGQEVLFLCATDEHGTPAELAAAKAG 67
Query: 88 CTTQQICDKYYAIHKAVYNWFNISFDEFGRTSTPQQTEICQAIFKKLLENNWLSEYTTQQ 147
+ C +A+ + F +SFD FGR+S+PQ + Q KL + ++E +Q
Sbjct: 68 KPVAEYCADMHAVQAEIARGFRLSFDHFGRSSSPQNHALTQHFAGKLADAGLIAEVEEKQ 127
Query: 148 LYCDTCKRFLADRLVEGSCPTLGCNYDSARGDQCEKCGKLLNPTELKDPRCKVCQATP-K 206
+Y RFL DR +EG+CP C YD ARGDQCE C K L+PT+L +PR + +T +
Sbjct: 128 VYSHADGRFLPDRYIEGTCPN--CGYDKARGDQCENCTKQLDPTDLINPRSAISGSTDLE 185
Query: 207 IRDTDHLFLELPLIKDKLEEYINKMSVSGSWSQNAIQGTYAWLK--DGLKPRCITRDLKW 264
+R+T HL+L ++ +L ++I+ + W WL DGL+ R ITRDL W
Sbjct: 186 VRETKHLYLRQSQLRGQLSDWISSKT---DWPILTTSIAKKWLNDGDGLQDRGITRDLDW 242
Query: 265 GVPVPHEK-----FKDKVFYVWFDAPIGYI-----SITSCYTPDWEEWW---KNPENVAL 311
GVPV + KVFYVWFDAPI YI ++ DWE WW K ++V
Sbjct: 243 GVPVKRGDADWPGMEGKVFYVWFDAPIEYIACAAEAVEEGSISDWERWWRVDKGADDVRY 302
Query: 312 YQFMGKDNAPFHTVMFPSTLLGTEENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGNDVK 371
QFMGKDN PFHT+ FP+T+LG+ E W L+ I YLNY+ G+FS S+G GVF +
Sbjct: 303 VQFMGKDNVPFHTLSFPATILGSGEPWKLVDYIKSFNYLNYDGGQFSTSQGRGVFMDQAL 362
Query: 372 DTNIPAEVWRYYLITNRPEVSDTLFTWEDFQAKLNTELLNNLGNFVNRVLSFIAKPPGRG 431
+ +P++ WR++L+++ PE SD FTWE FQ +N +L + LGNFV+R+ F
Sbjct: 363 EI-LPSDYWRWWLLSHAPETSDAEFTWEAFQQDVNKDLADVLGNFVSRITKFCRSK---- 417
Query: 432 YGSIIPDSPKADLHPSTKMLAEKISNHIDQYIEAMEKVKLKQGLRIGMSISSEGNAYLQE 491
+G ++P+ D P L + + Y M+ + +++ +I GN YLQ
Sbjct: 418 FGEVVPEG--GDYGPQETALIADLDKRLAAYQTHMDAIDIRKAAAELRAIWVAGNEYLQS 475
Query: 492 SQFWKLYNEDQGSCSIVIRTSVGLVYLLACLLEPFMPSFSLEVLKQLNV----PTETKFS 547
+ W + D + + R ++ L+ A L PF+P + + + ++ P + + +
Sbjct: 476 AAPWTAFKTDPDRAAAITRFALNLIPFYAGLSAPFIPDAAQAMAEGMHTNLTWPKDARLT 535
Query: 548 LSDENGDLERARKPWEILPAGHRIGMSSPLFKELKDEDVRFFREKFAG 595
LPAGH + LF ++ DE + +F+G
Sbjct: 536 ----------------TLPAGHAFTVPDVLFAKIADEQREDWAARFSG 567
>sp|Q9A884|SYM_CAUCR Methionine--tRNA ligase OS=Caulobacter crescentus (strain ATCC
19089 / CB15) GN=metG PE=3 SV=1
Length = 569
Score = 390 bits (1003), Expect = e-107, Method: Compositional matrix adjust.
Identities = 213/585 (36%), Positives = 320/585 (54%), Gaps = 33/585 (5%)
Query: 27 ILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNALYICGTDEYGTATETKAMEE 86
ILITSALPY+N + HLGN+ G +L ADV+AR+ R +G+ LYIC TDE+GT E A
Sbjct: 4 ILITSALPYINGIKHLGNLAGSMLPADVYARFKRAQGHETLYICATDEHGTPAELAAAAA 63
Query: 87 NCTTQQICDKYYAIHKAVYNWFNISFDEFGRTSTPQQTEICQAIFKKLLENNWLSEYTTQ 146
C + + + V F +S+D FGR+S+PQ + Q + L ++ + E Q
Sbjct: 64 GQDVATYCAEQHVLQHEVGRAFGLSWDHFGRSSSPQNHRLTQHFCQALEDHGLIEERVDQ 123
Query: 147 QLYCDTCKRFLADRLVEGSCPTLGCNYDSARGDQCEKCGKLLNPTELKDPRCKVCQA-TP 205
+Y KRFL DR VEG+CP C ++ ARGDQC+ CG LL+PT+L DP + +
Sbjct: 124 MVYSVDDKRFLPDRYVEGTCPH--CKFEKARGDQCDNCGNLLDPTDLIDPYSVISGSRNI 181
Query: 206 KIRDTDHLFLELPLIKDKLEEYINKMSVSGSWSQNAIQGTYAWLKDGLKPRCITRDLKWG 265
++RDT HL+L ++DK+ +++ W A Y L +GL R ITRDL WG
Sbjct: 182 EVRDTKHLYLLQTKMQDKIRAWVD---AHADWPPLARSIAYKHLDEGLIDRGITRDLAWG 238
Query: 266 VP-----VPHEKFKDKVFYVWFDAPIGYISITSCYTP-----DWEEWWK---NPENVALY 312
+P VP F++KVFYVWFDAPI YI+ T + DW+ WW+ ++V
Sbjct: 239 IPVAQDGVPRPGFEEKVFYVWFDAPIEYIAATQEWAEGSPDRDWKRWWRTDAGADDVRYV 298
Query: 313 QFMGKDNAPFHTVMFPSTLLGTEENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGNDVKD 372
QFMGKDN FHTV FP+T+LG+EE W + + +LN+ GKFS S GVF D
Sbjct: 299 QFMGKDNVAFHTVSFPATILGSEEPWKSVDMLKAFNWLNWYGGKFSTSNKRGVF-MDAAL 357
Query: 373 TNIPAEVWRYYLITNRPEVSDTLFTWEDFQAKLNTELLNNLGNFVNRVLSFIAKPPGRGY 432
+P ++WR+YL N PE SDT FTWE F + +N +L + LGNFVNR+L F +
Sbjct: 358 EILPPDLWRWYLTANSPEGSDTAFTWEQFASAVNRDLADVLGNFVNRILKFNESK----F 413
Query: 433 GSIIPDSPKADLHPSTKMLAEKISNHIDQYIEAMEKVKLKQGLRIGMSISSEGNAYLQES 492
++P + P + L +S + E M+ +++++ + ++ GN YLQE+
Sbjct: 414 EGVVPAG--GEPGPLEEKLFADVSARLADLAEQMDAIEIRKSAQALRALWVVGNEYLQEA 471
Query: 493 QFWKLYNEDQGSCSIVIRTSVGLVYLLACLLEPFMPSFSLEVLKQLNVPTETKFSLSDEN 552
W D+ ++++RT++ L L A + PF+P + ++ + + +D
Sbjct: 472 APWTAIKTDRDRAAVIVRTALNLAALYAKISAPFIPFAAEKIGDAFGLDFPASWPSNDAK 531
Query: 553 GDLERARKPWEILPAGHRIGMSSPLFKELKDEDVRFFREKFAGSQ 597
+L L G I + LFK+++DE + + +F G++
Sbjct: 532 AEL-------NTLSVGRPITVPEVLFKKIEDEQIAEWTARFGGAE 569
>sp|B8H5U4|SYM_CAUCN Methionine--tRNA ligase OS=Caulobacter crescentus (strain NA1000 /
CB15N) GN=metG PE=3 SV=1
Length = 569
Score = 390 bits (1003), Expect = e-107, Method: Compositional matrix adjust.
Identities = 213/585 (36%), Positives = 320/585 (54%), Gaps = 33/585 (5%)
Query: 27 ILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNALYICGTDEYGTATETKAMEE 86
ILITSALPY+N + HLGN+ G +L ADV+AR+ R +G+ LYIC TDE+GT E A
Sbjct: 4 ILITSALPYINGIKHLGNLAGSMLPADVYARFKRAQGHETLYICATDEHGTPAELAAAAA 63
Query: 87 NCTTQQICDKYYAIHKAVYNWFNISFDEFGRTSTPQQTEICQAIFKKLLENNWLSEYTTQ 146
C + + + V F +S+D FGR+S+PQ + Q + L ++ + E Q
Sbjct: 64 GQDVATYCAEQHVLQHEVGRAFGLSWDHFGRSSSPQNHRLTQHFCQALEDHGLIEERVDQ 123
Query: 147 QLYCDTCKRFLADRLVEGSCPTLGCNYDSARGDQCEKCGKLLNPTELKDPRCKVCQA-TP 205
+Y KRFL DR VEG+CP C ++ ARGDQC+ CG LL+PT+L DP + +
Sbjct: 124 MVYSVDDKRFLPDRYVEGTCPH--CKFEKARGDQCDNCGNLLDPTDLIDPYSVISGSRNI 181
Query: 206 KIRDTDHLFLELPLIKDKLEEYINKMSVSGSWSQNAIQGTYAWLKDGLKPRCITRDLKWG 265
++RDT HL+L ++DK+ +++ W A Y L +GL R ITRDL WG
Sbjct: 182 EVRDTKHLYLLQTKMQDKIRAWVD---AHADWPPLARSIAYKHLDEGLIDRGITRDLAWG 238
Query: 266 VP-----VPHEKFKDKVFYVWFDAPIGYISITSCYTP-----DWEEWWK---NPENVALY 312
+P VP F++KVFYVWFDAPI YI+ T + DW+ WW+ ++V
Sbjct: 239 IPVAQDGVPRPGFEEKVFYVWFDAPIEYIAATQEWAEGSPDRDWKRWWRTDAGADDVRYV 298
Query: 313 QFMGKDNAPFHTVMFPSTLLGTEENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGNDVKD 372
QFMGKDN FHTV FP+T+LG+EE W + + +LN+ GKFS S GVF D
Sbjct: 299 QFMGKDNVAFHTVSFPATILGSEEPWKSVDMLKAFNWLNWYGGKFSTSNKRGVF-MDAAL 357
Query: 373 TNIPAEVWRYYLITNRPEVSDTLFTWEDFQAKLNTELLNNLGNFVNRVLSFIAKPPGRGY 432
+P ++WR+YL N PE SDT FTWE F + +N +L + LGNFVNR+L F +
Sbjct: 358 EILPPDLWRWYLTANSPEGSDTAFTWEQFASAVNRDLADVLGNFVNRILKFNESK----F 413
Query: 433 GSIIPDSPKADLHPSTKMLAEKISNHIDQYIEAMEKVKLKQGLRIGMSISSEGNAYLQES 492
++P + P + L +S + E M+ +++++ + ++ GN YLQE+
Sbjct: 414 EGVVPAG--GEPGPLEEKLFADVSARLADLAEQMDAIEIRKSAQALRALWVVGNEYLQEA 471
Query: 493 QFWKLYNEDQGSCSIVIRTSVGLVYLLACLLEPFMPSFSLEVLKQLNVPTETKFSLSDEN 552
W D+ ++++RT++ L L A + PF+P + ++ + + +D
Sbjct: 472 APWTAIKTDRDRAAVIVRTALNLAALYAKISAPFIPFAAEKIGDAFGLDFPASWPSNDAK 531
Query: 553 GDLERARKPWEILPAGHRIGMSSPLFKELKDEDVRFFREKFAGSQ 597
+L L G I + LFK+++DE + + +F G++
Sbjct: 532 AEL-------NTLSVGRPITVPEVLFKKIEDEQIAEWTARFGGAE 569
>sp|B6YUN0|SYM_THEON Methionine--tRNA ligase OS=Thermococcus onnurineus (strain NA1)
GN=metG PE=3 SV=1
Length = 733
Score = 390 bits (1002), Expect = e-107, Method: Compositional matrix adjust.
Identities = 215/581 (37%), Positives = 318/581 (54%), Gaps = 47/581 (8%)
Query: 28 LITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNALYICGTDEYGTATETKAMEEN 87
++TSALPY N H G++ G L AD+F RY RL+G ++I GTDE+GT +A++E
Sbjct: 5 MVTSALPYANGPIHAGHLAGAYLPADIFVRYLRLKGEEVIFISGTDEHGTPITFRALKEG 64
Query: 88 CTTQQICDKYYAIHKAVYNWFNISFDEFGRTSTPQQTEICQAIFKKLLENNWLSEYTTQQ 147
+ ++I D Y+ K + ISFD FGRT P I Q F K LEN+ L + ++Q
Sbjct: 65 KSPREIVDYYHEHIKTTFERAKISFDYFGRTELPVHYRISQDFFLKALENDHLIKKVSKQ 124
Query: 148 LYCDTCKRFLADRLVEGSCPTLGCNYDSARGDQCEKCGKLLNPTELKDPRCKVCQATPKI 207
YC+ K FL DR V G+CP C ++ RGDQCE CG L P EL +PRC +C
Sbjct: 125 AYCEHDKMFLPDRYVIGTCPY--CGAENQRGDQCEVCGHPLTPEELINPRCNICGNPITF 182
Query: 208 RDTDHLFLELPLIKDKLEEYINKMSVSGSWSQNAIQGTYAWLKDGLKPRCITRDLKWGVP 267
RD+ H ++++ +KL+E++ W N W+++GL+ R ITRDL WG+P
Sbjct: 183 RDSAHYYIKMQDFAEKLKEWVQSQE---HWKPNVKNTVLGWIEEGLEERAITRDLNWGIP 239
Query: 268 VP--HEKFKDKVFYVWFDAPIGYISITSCYTP------DWEEWWKNPE-NVALYQFMGKD 318
VP E K KV YVWF+APIGYISIT + +W+++W N + + F+GKD
Sbjct: 240 VPLDDEDVKGKVLYVWFEAPIGYISITVEHLKREGKENEWKKFWLNLDGGTKVIHFIGKD 299
Query: 319 NAPFHTVMFPSTLLG--------TEENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGNDV 370
N PFH + +P+ L+ TE W L I EYLN E KFS S+ ++ ++
Sbjct: 300 NIPFHAIFWPAFLMAYGKYKEEETEAEWLLPYDIPANEYLNLEGKKFSTSRNWAIWVHEF 359
Query: 371 KDTNIPAEVWRYYLITNRPEVSDTLFTWEDFQAKLNTELLNNLGNFVNRVLSFIAKPPGR 430
D PA+ RYYL PE D+ F++ DF+ K+N EL+NNLGNFV+R L+F+ R
Sbjct: 360 LDA-FPADYLRYYLTAIMPETRDSDFSFADFKTKINEELVNNLGNFVHRALTFV----NR 414
Query: 431 GYGSIIPDSPKADLHPSTKMLAEKISNHIDQYIEAMEKVKLKQGLRIGMSISSEGNAYLQ 490
+ ++P+ + +L + E+I + + E + + K LR M ++ GN Y
Sbjct: 415 YFDGVVPE--RGELDDLDRQAFEEIEKALKETGELISTYRFKDALRRVMELAIFGNRYFD 472
Query: 491 ESQFWKLYNEDQGSCSIVIRTSVGLVYLLACLLEPFMPSFSLEVLKQLNVPTETKFSLSD 550
+ WK E++ + + S+ +V +L LLEPF+P S ++ LN
Sbjct: 473 YQKPWKTAKENRERTATTVNVSLQIVKVLGVLLEPFLPDASEKIWHLLN----------- 521
Query: 551 ENGDLERARKPWEI--LPAGHRIGMSSPLFKELKDEDVRFF 589
LE ++ WE +PAGHR+ + LF+++ DED+ FF
Sbjct: 522 ----LEETKR-WEFIEIPAGHRVRRAEILFRKVTDEDIIFF 557
>sp|O58721|SYM_PYRHO Methionine--tRNA ligase OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=metG PE=3 SV=1
Length = 723
Score = 389 bits (998), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/585 (35%), Positives = 319/585 (54%), Gaps = 44/585 (7%)
Query: 28 LITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNALYICGTDEYGTATETKAMEEN 87
++TSALPY N H G++ G L AD+F RY RL+G + ++ICGTDE+GT +A++E
Sbjct: 5 MVTSALPYANGPIHAGHLAGAYLPADIFVRYLRLKGEDVVFICGTDEHGTPISFRALKEG 64
Query: 88 CTTQQICDKYYAIHKAVYNWFNISFDEFGRTSTPQQTEICQAIFKKLLENNWLSEYTTQQ 147
+ ++I D+++ K + ISFD FGRT P ++ Q F K EN L + T+Q
Sbjct: 65 RSPREIVDEFHEHIKITFQRAKISFDFFGRTELPIHYKLSQQFFLKAYENGHLVKKVTKQ 124
Query: 148 LYCDTCKRFLADRLVEGSCPTLGCNYDSARGDQCEKCGKLLNPTELKDPRCKVCQATPKI 207
YC+ K FL DR V G+CP C ++ RGDQCE CG+ L P L +PRC +C
Sbjct: 125 AYCEHDKMFLPDRFVIGTCPF--CGAENQRGDQCEVCGRPLTPEILINPRCALCGRPISF 182
Query: 208 RDTDHLFLELPLIKDKLEEYINKMSVSGSWSQNAIQGTYAWLKDGLKPRCITRDLKWGVP 267
R++ H ++++ +KL+ +I + W N W+++GL+ R ITRDL WG+P
Sbjct: 183 RESAHYYIKMQDFAEKLKRWIE----NQPWKPNVKNMVLKWIEEGLEERAITRDLNWGIP 238
Query: 268 VP--HEKFKDKVFYVWFDAPIGYISITSCYTP------DWEEWWKNPEN-VALYQFMGKD 318
VP E K+KV YVWF+APIGYISIT Y +W+++W N ++ + F+GKD
Sbjct: 239 VPLDEEDMKNKVLYVWFEAPIGYISITMEYFKRLGKPNEWKKYWLNIDSETRVIHFIGKD 298
Query: 319 NAPFHTVMFPSTLLG--------TEENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGNDV 370
N PFH + +P+ L+ E W L I EYL E KFS S+ ++ ++
Sbjct: 299 NIPFHAIFWPAFLMAYGKYKDEEVEAEWNLPYDIPANEYLTLEGKKFSTSRNWAIWVHEF 358
Query: 371 KDTNIPAEVWRYYLITNRPEVSDTLFTWEDFQAKLNTELLNNLGNFVNRVLSFIAKPPGR 430
D PA+ RYYL T PE D+ F++ +F+ ++N EL+NNLGNFV+R ++F+ R
Sbjct: 359 LDV-FPADYLRYYLTTIMPETRDSDFSFAEFKTRINEELVNNLGNFVHRAMTFV----NR 413
Query: 431 GYGSIIPDSPKADLHPSTKMLAEKISNHIDQYIEAMEKVKLKQGLRIGMSISSEGNAYLQ 490
+ I+P+ + +L + E+I ++ E + + K L+ M ++S GN Y
Sbjct: 414 YFDGIVPE--RGELDELDRQALEEIEKAFEEVGELIMNYRFKDALKRVMELASFGNKYFD 471
Query: 491 ESQFWKLYNEDQGSCSIVIRTSVGLVYLLACLLEPFMPSFSLEVLKQLNVPTETKFSLSD 550
Q WK ED+ + S+ +V L LLEPF+P S ++ LN+ K+ +
Sbjct: 472 HKQPWKTAKEDRARTGTTVNISLQIVKALGILLEPFLPDASEKIWHLLNLDEVKKWKFKE 531
Query: 551 ENGDLERARKPWEILPAGHRIGMSSPLFKELKDEDVRFFREKFAG 595
LPAGHR+ + LFK++ DE + +F + G
Sbjct: 532 --------------LPAGHRVRKAEILFKKVTDEQIIYFILNYMG 562
>sp|A1B3P3|SYM_PARDP Methionine--tRNA ligase OS=Paracoccus denitrificans (strain Pd
1222) GN=metG PE=3 SV=1
Length = 572
Score = 386 bits (991), Expect = e-106, Method: Compositional matrix adjust.
Identities = 216/587 (36%), Positives = 319/587 (54%), Gaps = 41/587 (6%)
Query: 28 LITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNALYICGTDEYGTATETKAMEEN 87
LITSA+PY+N + HLGN++G L AD++ARY R R ++IC TDE+GT E A +
Sbjct: 5 LITSAIPYINGIKHLGNLVGSQLPADLYARYLRGRDNEVMFICATDEHGTPAELAAAKAG 64
Query: 88 CTTQQICDKYYAIHKAVYNWFNISFDEFGRTSTPQQTEICQAIFKKLLENNWLSEYTTQQ 147
C + + + + F +SFD FGR+S+ + + Q KL EN +++E +Q
Sbjct: 65 KPIAVYCAEMHEVQAEIARNFGLSFDHFGRSSSERNHVLTQHFAGKLDENGYIAEVEERQ 124
Query: 148 LYCDTCKRFLADRLVEGSCPTLGCNYDSARGDQCEKCGKLLNPTELKDPRCKVCQATP-K 206
+Y RFL DR +EG+CP C YD ARGDQCE C K L+PT+L +PR + +T +
Sbjct: 125 VYSIDDGRFLPDRYIEGTCPN--CGYDKARGDQCENCTKQLDPTDLIEPRSAISGSTNLE 182
Query: 207 IRDTDHLFLELPLIKDKLEEYINKMSVSGSWSQNAIQGTYAWLK--DGLKPRCITRDLKW 264
+R T HL+L +KD++ +I+ + W WL DGL+ R ITRDL W
Sbjct: 183 VRATKHLYLRQRSLKDRIAAWIDSKT---DWPILTTSIARKWLNDGDGLQDRGITRDLDW 239
Query: 265 GVPV-----PHEKFKDKVFYVWFDAPIGYISITSCYT-----PD--WEEWWK---NPENV 309
G+PV P + KVFYVWFDAPI YI+ T+ PD W WW+ E+V
Sbjct: 240 GIPVKKGDKPWPGMEGKVFYVWFDAPIEYIAATAEGADKRGEPDSAWRRWWRLDEGAEDV 299
Query: 310 ALYQFMGKDNAPFHTVMFPSTLLGTEENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGND 369
QFMGKDN PFHT+ FP+T++G+ E W L+ I YL Y+ G+FS S+G GVF D
Sbjct: 300 TYTQFMGKDNVPFHTLSFPATIIGSGEPWKLVDYIKSFNYLTYDGGQFSTSQGRGVF-MD 358
Query: 370 VKDTNIPAEVWRYYLITNRPEVSDTLFTWEDFQAKLNTELLNNLGNFVNRVLSFIAKPPG 429
+ +PA+ WR++L+++ PE D+ FTW++FQ +N +L + LGNFV+R+ F
Sbjct: 359 QALSILPADYWRWWLLSHAPESGDSEFTWDNFQQSVNKDLADVLGNFVSRITKFCRSK-- 416
Query: 430 RGYGSIIPDSPKADLHPSTKMLAEKISNHIDQYIEAMEKVKLKQGLRIGMSISSEGNAYL 489
+G IP P + L + ++ I Y M+ V++++ +I GN YL
Sbjct: 417 --FGETIPQG--GSYGPEEEALIQALTTRIRAYEGFMDHVEVRKSAAELRAIWVLGNEYL 472
Query: 490 QESQFWKLYNEDQGSCSIVIRTSVGLVYLLACLLEPFMPSFSLEVLKQLNVPTETKFSLS 549
Q + W + D ++ +R + L+ L A L PF+P + +L +
Sbjct: 473 QSAAPWSTFKTDPDKAAMQVRLGLNLIRLYAVLSAPFIPFAADAMLAAMQT--------- 523
Query: 550 DENGDL-ERARKPWEILPAGHRIGMSSPLFKELKDEDVRFFREKFAG 595
EN D + R E LPAGH + LF ++ DE ++++F G
Sbjct: 524 -ENRDWPDDVRAALEALPAGHAFTVPEVLFAKISDESRDEWQDRFKG 569
>sp|Q9V011|SYM_PYRAB Methionine--tRNA ligase OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=metG PE=1 SV=1
Length = 722
Score = 383 bits (984), Expect = e-105, Method: Compositional matrix adjust.
Identities = 212/581 (36%), Positives = 316/581 (54%), Gaps = 48/581 (8%)
Query: 28 LITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNALYICGTDEYGTATETKAMEEN 87
++TSALPY N H G++ G L AD+F RY RL+G + ++ICGTDE+GT +A++E
Sbjct: 5 MVTSALPYANGPIHAGHLAGAYLPADIFVRYLRLKGEDVVFICGTDEHGTPISFRALKEG 64
Query: 88 CTTQQICDKYYAIHKAVYNWFNISFDEFGRTSTPQQTEICQAIFKKLLENNWLSEYTTQQ 147
+ ++I D+++ K + ISFD FGRT P ++ Q F K EN L + T+Q
Sbjct: 65 RSPREIVDEFHEQIKITFQRAKISFDFFGRTELPIHYKLSQEFFLKAYENGHLVKKVTKQ 124
Query: 148 LYCDTCKRFLADRLVEGSCPTLGCNYDSARGDQCEKCGKLLNPTELKDPRCKVCQATPKI 207
YC+ K FL DR V G+CP C + +GDQCE CG+ L P L +PRC +C
Sbjct: 125 AYCEHDKMFLPDRFVIGTCPY--CGAEDQKGDQCEVCGRPLTPEILINPRCAICGRPISF 182
Query: 208 RDTDHLFLELPLIKDKLEEYINKMSVSGSWSQNAIQGTYAWLKDGLKPRCITRDLKWGVP 267
RD+ H ++++ ++L+ +I K W N +W+++GL+ R ITRDL WG+P
Sbjct: 183 RDSAHYYIKMQDFAERLKRWIEKQ----PWKPNVKNMVLSWIEEGLEERAITRDLNWGIP 238
Query: 268 VP--HEKFKDKVFYVWFDAPIGYISITSCYTP------DWEEWWKNPE-NVALYQFMGKD 318
VP E K KV YVWF+APIGYISIT + +W+++W N + + F+GKD
Sbjct: 239 VPLDEEDMKGKVLYVWFEAPIGYISITIEHFKRIGKPNEWKKYWLNIDGQTRVIHFIGKD 298
Query: 319 NAPFHTVMFPSTLLG--------TEENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGNDV 370
N PFH + +P+ L+ E W L I EYL E KFS S+ ++ ++
Sbjct: 299 NIPFHAIFWPAFLMAYGKYKDEEVEAEWNLPYDIPANEYLTLEGKKFSTSRNWAIWVHEF 358
Query: 371 KDTNIPAEVWRYYLITNRPEVSDTLFTWEDFQAKLNTELLNNLGNFVNRVLSFIAKPPGR 430
D PA+ RYYL T PE D+ F++ DF+ ++N EL+NNLGNFV+R L+F+ R
Sbjct: 359 LDV-FPADYLRYYLTTIMPETRDSDFSFSDFKVRINEELVNNLGNFVHRALTFV----NR 413
Query: 431 GYGSIIPDSPKADLHPSTKMLAEKISNHIDQYIEAMEKVKLKQGLRIGMSISSEGNAYLQ 490
+ ++P+ + +L + E+I + E + + K L+ MS++S GN Y
Sbjct: 414 YFDGVVPE--RGELDELDREALEEIEKAFKEVGELIMNYRFKDALKRVMSLASFGNRYFD 471
Query: 491 ESQFWKLYNEDQGSCSIVIRTSVGLVYLLACLLEPFMPSFSLEVLKQLNVPTETKFSLSD 550
Q WK ED+ + S+ +V L LLEPF+P S ++ LN+ D
Sbjct: 472 HKQPWKTAKEDKVRTGTTVNISLQIVKALGILLEPFLPDASEKIWHLLNL---------D 522
Query: 551 ENGDLERARKPWEI--LPAGHRIGMSSPLFKELKDEDVRFF 589
E K WE LPAGH++ LFK++ D+ + +F
Sbjct: 523 EV-------KRWEFRELPAGHKVRKPEILFKKVTDDQIIYF 556
>sp|Q8U221|SYM_PYRFU Methionine--tRNA ligase OS=Pyrococcus furiosus (strain ATCC 43587 /
DSM 3638 / JCM 8422 / Vc1) GN=metG PE=3 SV=1
Length = 724
Score = 383 bits (984), Expect = e-105, Method: Compositional matrix adjust.
Identities = 211/611 (34%), Positives = 326/611 (53%), Gaps = 44/611 (7%)
Query: 28 LITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNALYICGTDEYGTATETKAMEEN 87
++T+ALPY N H G++ G L AD+F RY RL+G + ++ICGTDE+GT +A+ E
Sbjct: 5 MVTAALPYANGPIHAGHLAGAYLPADIFVRYLRLKGEDVVFICGTDEHGTPISFRALNEK 64
Query: 88 CTTQQICDKYYAIHKAVYNWFNISFDEFGRTSTPQQTEICQAIFKKLLENNWLSEYTTQQ 147
+ ++I D+++ K + ISFD FGRT P + Q F K LEN +L + T+Q
Sbjct: 65 RSPREIVDEFHEHIKTAFQRVKISFDYFGRTELPVHYRLSQEFFLKALENGYLVKKVTKQ 124
Query: 148 LYCDTCKRFLADRLVEGSCPTLGCNYDSARGDQCEKCGKLLNPTELKDPRCKVCQATPKI 207
YC+ KRFL DR V G+CP C ++ RGDQCE CG+ L P L +PRC C+
Sbjct: 125 AYCEHDKRFLPDRFVIGTCPY--CGAENQRGDQCEVCGRPLTPEILIEPRCAFCKNPITF 182
Query: 208 RDTDHLFLELPLIKDKLEEYINKMSVSGSWSQNAIQGTYAWLKDGLKPRCITRDLKWGVP 267
R++ H ++++ ++KL+E+I + W N W+++GL+ R ITRDL WG+P
Sbjct: 183 RESTHYYIKMQEFEEKLKEWIKE----KDWKPNVKNMVLGWIEEGLEERAITRDLDWGIP 238
Query: 268 VP--HEKFKDKVFYVWFDAPIGYISITSCYTP------DWEEWWKNPE-NVALYQFMGKD 318
VP E K+KV YVWF+APIGYIS+T Y +W+++W N + + F+GKD
Sbjct: 239 VPLDEEDMKNKVLYVWFEAPIGYISLTIEYFKRIGKPNEWKKYWLNLDGQTRVIHFIGKD 298
Query: 319 NAPFHTVMFPSTLLG--------TEENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGNDV 370
N PFH + +P+ L+ E W L I EYL E KFS S+ ++ ++
Sbjct: 299 NIPFHAIFWPAFLMAYGKYKDEEVEAEWNLPYDIPANEYLTLEGKKFSTSRNWAIWIHEF 358
Query: 371 KDTNIPAEVWRYYLITNRPEVSDTLFTWEDFQAKLNTELLNNLGNFVNRVLSFIAKPPGR 430
D PA+ RYYL + PE D+ F++ +F+ K+N EL+N LGNFV R L+F+ R
Sbjct: 359 LDV-FPADYLRYYLTSIMPETRDSDFSFAEFKTKINEELVNVLGNFVYRALTFV----NR 413
Query: 431 GYGSIIPDSPKADLHPSTKMLAEKISNHIDQYIEAMEKVKLKQGLRIGMSISSEGNAYLQ 490
+ I+P+ + +L + E+I ++ + + + + K L+ M+++ GN Y
Sbjct: 414 YFDGIVPE--RGELDELDRQALEEIEKTFEEVGKLIREYRFKDALKKVMNLAGFGNRYFD 471
Query: 491 ESQFWKLYNEDQGSCSIVIRTSVGLVYLLACLLEPFMPSFSLEVLKQLNVPTETKFSLSD 550
+ WK ED+ I S+ +V L LLEPF+P S ++ LN+ + ++
Sbjct: 472 YKEPWKTIKEDKTRTGTTINISLQIVKALGILLEPFLPDASEKIWHFLNLEEVKTWRFTE 531
Query: 551 ENGDLERARKPWEILPAGHRIGMSSPLFKELKDEDVRFFREKFAGSQADRAVQAEAEAKR 610
LPAGH++ LFK+ D+ + +F + G A + E
Sbjct: 532 --------------LPAGHKVRKPEILFKKASDDQIIYFILNYMGRNNPDAARELLEKYY 577
Query: 611 LAEHLKKTKIS 621
E ++K I
Sbjct: 578 KLEDVEKVAIE 588
>sp|Q5JDZ7|SYM_PYRKO Methionine--tRNA ligase OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=metG PE=3 SV=1
Length = 741
Score = 383 bits (983), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/585 (35%), Positives = 317/585 (54%), Gaps = 43/585 (7%)
Query: 28 LITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNALYICGTDEYGTATETKAMEEN 87
++TSALPY N H G++ G L AD+F RY RL+G L+ICGTDE+GT +A++E
Sbjct: 5 MVTSALPYANGPIHAGHLAGAYLPADIFVRYLRLKGEEVLFICGTDEHGTPITFRALKEG 64
Query: 88 CTTQQICDKYYAIHKAVYNWFNISFDEFGRTSTPQQTEICQAIFKKLLENNWLSEYTTQQ 147
+ ++I D+++ K + ISFD FGRT P + Q F K LEN L + T+Q
Sbjct: 65 RSPREIVDEFHEHIKTTFERAKISFDFFGRTELPVHYRLSQEFFLKALENGHLVKKVTKQ 124
Query: 148 LYCDTCKRFLADRLVEGSCPTLGCNYDSARGDQCEKCGKLLNPTELKDPRCKVCQATPKI 207
YC+ K FL DR V G+CP C ++ RGDQCE CG L P L +PRC +C
Sbjct: 125 AYCEHDKMFLPDRYVIGTCPY--CGAENQRGDQCEVCGHPLTPEILINPRCNICGNPITF 182
Query: 208 RDTDHLFLELPLIKDKLEEYINKMSVSGSWSQNAIQGTYAWLKDGLKPRCITRDLKWGVP 267
+D+ H ++ + +++L++++ W N W+ +GL+ R ITRDL WG+P
Sbjct: 183 KDSAHYYIRMQDFEERLKKWVESQE---HWKPNVRNTVLGWINEGLEERAITRDLDWGIP 239
Query: 268 VP--HEKFKDKVFYVWFDAPIGYISITSCYTP------DWEEWWKNPEN-VALYQFMGKD 318
VP E K KV YVWF+APIGYISIT + +W+++W N + + F+GKD
Sbjct: 240 VPLDDEDVKGKVLYVWFEAPIGYISITIEHLKREGKENEWKKFWLNLDGETKVIHFIGKD 299
Query: 319 NAPFHTVMFPSTLLG--------TEENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGNDV 370
N PFH + +P+ L+ E W L I EYLN E KFS S+ ++ ++
Sbjct: 300 NIPFHAIFWPAFLMAYGKYRDEEVEAEWNLPYDIPANEYLNLEGKKFSTSRNWAIWVHEF 359
Query: 371 KDTNIPAEVWRYYLITNRPEVSDTLFTWEDFQAKLNTELLNNLGNFVNRVLSFIAKPPGR 430
D PA+ RYYL PE D+ F++EDF+ K+N EL+NNLGNFV+R ++F+ R
Sbjct: 360 LDV-WPADYLRYYLTAIMPETRDSDFSFEDFKKKINEELVNNLGNFVHRAMTFV----NR 414
Query: 431 GYGSIIPDSPKADLHPSTKMLAEKISNHIDQYIEAMEKVKLKQGLRIGMSISSEGNAYLQ 490
+ ++P+ + +L+ + E+I + E + + K L+ M ++ GN Y
Sbjct: 415 YFDGVVPE--RGELNDLDRQALEEIEKAFKETGELISNYRFKDALKRVMELAIFGNRYFD 472
Query: 491 ESQFWKLYNEDQGSCSIVIRTSVGLVYLLACLLEPFMPSFSLEVLKQLNVPTETKFSLSD 550
+ WK E++ + + S+ +V L LLEPF+P S ++ LN+ K+S +
Sbjct: 473 YQKPWKTAKENRERTATTVNVSLQIVKALGILLEPFLPDASEKIWHLLNLEEVKKWSFEE 532
Query: 551 ENGDLERARKPWEILPAGHRIGMSSPLFKELKDEDVRFFREKFAG 595
LPAGHR+ + P+F+++ D ++ +F + G
Sbjct: 533 --------------LPAGHRVRKAFPMFRKVTDGEIIYFIVNYIG 563
>sp|A0M5Z9|SYM_GRAFK Methionine--tRNA ligase OS=Gramella forsetii (strain KT0803)
GN=metG PE=3 SV=1
Length = 691
Score = 380 bits (975), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/580 (36%), Positives = 321/580 (55%), Gaps = 20/580 (3%)
Query: 29 ITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNALYICGTDEYGTATETKAMEENC 88
IT+ALPY N H+G++ G + AD+++R+ R++GY+ ++CG+DE+G KA +E
Sbjct: 10 ITAALPYTNGPIHIGHLAGVYVPADIYSRFLRMQGYDVAFVCGSDEHGVPITIKAKKEGV 69
Query: 89 TTQQICDKYYAIHKAVYNWFNISFDEFGRTSTPQQTEICQAIFKKLLENNWLSEYTTQQL 148
T Q + DKY I K + F I+FD + RTS + A FKK+ E+ E +T+QL
Sbjct: 70 TPQDVVDKYNGIIKKSFEDFGITFDNYSRTSGKTHHDTASAFFKKMYEDGKFIEESTEQL 129
Query: 149 YCDTCKRFLADRLVEGSCPTLGCNYDSARGDQCEKCGKLLNPTELKDPRCKVCQATPKIR 208
Y + +FLADR V G+CP C + A GDQCE CG LN T+L +P+ + A P ++
Sbjct: 130 YDEEAGQFLADRFVTGTCPK--CGNEEAYGDQCESCGTSLNATDLINPKSAITGAVPTLK 187
Query: 209 DTDHLFLELPLIKDKLEEYINKMSVSGSWSQNAIQGTYAWLKDGLKPRCITRDLKWGVPV 268
+T H FL L +D L+E+I K S W N +W+ DGL+ R +TRDL WG+PV
Sbjct: 188 ETRHWFLPLDQYEDFLKEWILKGHKS-DWKSNVYGQVKSWIDDGLRARAVTRDLDWGIPV 246
Query: 269 PHEKFKDKVFYVWFDAPIGYISITSCYT----PDWEEWWKNPENVALYQFMGKDNAPFHT 324
P E KV YVWFDAPIGYIS T + DWE +WK+ EN L F+GKDN FH
Sbjct: 247 PVEGGDGKVLYVWFDAPIGYISSTKEWAEREGKDWEPYWKD-ENTKLVHFIGKDNIVFHC 305
Query: 325 VMFPSTLLGTEENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGND-VKDTNIPAEVWRYY 383
++FP +L ++ L + + E+LN E K S SK V+ ++ +++ +V RY
Sbjct: 306 IIFP-VMLKAHGDYILPENVPANEFLNLEGKKLSTSKNWAVWLHEYLEEFPDQQDVLRYV 364
Query: 384 LITNRPEVSDTLFTWEDFQAKLNTELLNNLGNFVNRVLSFIAKPPGRGYGSIIPDSPKAD 443
L N PE D FTW+DFQA+ N EL+ GNF+NRV+ K Y I+P+ P A
Sbjct: 365 LTANAPETKDNDFTWKDFQARNNNELVAIFGNFINRVVVLTNKY----YNGIVPE-PGAY 419
Query: 444 LHPSTKMLAEKISNHIDQYIEAMEKVKLKQGLRIGMSISSEGNAYLQESQFWKLYNEDQG 503
K +AE + + ++E+ + ++ M+++ GN YL + + WKL D+
Sbjct: 420 SEIDEKTIAE-LKAYPSVIASSIERYRFREAQGELMNLARLGNKYLADEEPWKLIKTDEE 478
Query: 504 SCSIVIRTSVGLVYLLACLLEPFMPSFSLEVLKQLNVPTETKFSLSDENGDLERARKPWE 563
++ ++ + L+ + EPF+P S ++ K LN E+ SD D +
Sbjct: 479 RVKTIMYVALQIASALSIISEPFLPFTSAKLKKMLNHVDES----SDNTPDWDIIGTKEA 534
Query: 564 ILPAGHRIGMSSPLFKELKDEDVRFFREKFAGSQADRAVQ 603
++ GH+IG + LF +++DE + EK ++ A++
Sbjct: 535 LILGGHQIGKAELLFSKIEDEQMEKQLEKLEATKTANAME 574
>sp|A1RXT9|SYM_THEPD Methionine--tRNA ligase OS=Thermofilum pendens (strain Hrk 5)
GN=metG PE=3 SV=1
Length = 565
Score = 378 bits (971), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/585 (36%), Positives = 329/585 (56%), Gaps = 31/585 (5%)
Query: 23 GKRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNALYICGTDEYGTATETK 82
+R L+ +A PY VPHLGN+IG VLSADV AR+ RL G +++ G+D +GT E +
Sbjct: 5 ARRKWLVLAAWPYAYGVPHLGNLIGSVLSADVAARFLRLAGDEVVFVSGSDMHGTPIEVE 64
Query: 83 AMEENCTTQQICDKYYAIHKAVYNWFNISFDEFGRTSTPQQTEICQAIFKKLLENNWLSE 142
A++ + + + ++ + K ++ + ISFD + +T +P + Q ++++ EN ++
Sbjct: 65 ALKRGESPKDLAERNHEKIKELFERWEISFDNYSKTESPTHIKFVQDFYRRVYENGYVFS 124
Query: 143 YTTQQLYCDTCKRFLADRLVEGSCPTLGCNYDSARGDQCEKCGKLLNPTELKDPRCKVCQ 202
T Q YC K FL DR + G+CP C YD A GDQCE CG+LL PT L +PRC +C
Sbjct: 125 DTVQLYYCPKDKIFLPDRYIVGTCPY--CGYDRAYGDQCENCGRLLEPTLLLNPRCAICG 182
Query: 203 ATPKIRDTDHLFLELPLIKDKLEEYINKMSVSGSWSQNAIQGTYAWLKDGLKPRCITRDL 262
+TP++R T H F +LP + D L+ YI + + + NA + L+DGLKPR +TRD
Sbjct: 183 STPELRTTTHWFFDLPKLTDALKRYIEE---NENLPPNARNMSLQILRDGLKPRALTRDN 239
Query: 263 KWGVPVPHEKFKDKVFYVWFDAPIGYISITSCYTPD------WEEWWKNPENVALYQFMG 316
KWG+P P +DK YVW +A +GYIS T Y W+E+W +PE ++Y F+G
Sbjct: 240 KWGIPAPFPGAEDKTIYVWMEAVLGYISATIEYFASKGEPEKWKEFWLDPETRSVY-FIG 298
Query: 317 KDNAPFHTVMFPSTLLGTEENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGNDVKDTNIP 376
KDN PFHT++ P+ L+ + E + L T++ TEYL + KFSKS+ +GV+ ++ + P
Sbjct: 299 KDNIPFHTLILPALLIASGEKYVLPWTVASTEYLLFRGLKFSKSRRIGVWIDEALEV-FP 357
Query: 377 AEVWRYYLITNRPEVSDTLFTWEDFQAKLNTELLNNLGNFVNRVLSFIAKPPGRGYGSII 436
A+ WR+ L++ RPE D FTWE+F +N +L +N+GNFV+RVL + R +G I
Sbjct: 358 ADYWRFVLVSLRPEQKDMSFTWEEFLRIVNNDLNDNIGNFVHRVLVLVQ----RKFGGIA 413
Query: 437 PDSPKADLHPSTKMLAEKISNHIDQYIEAMEKVKLKQGLRIGMSISSEGNAYLQESQFWK 496
P D E+I + E M + K+ L + +SS GN+YL + W+
Sbjct: 414 P--APLDFADEDLKFREEILARSREVAEFMYAFRFKEALTHILWLSSSGNSYLNFRKPWE 471
Query: 497 LYNEDQGSCSIVIRTSVGLVYLLACLLEPFMPSFSLEVLKQLNVPTETKFSLSDENGDLE 556
L +E + + + ++ V LA +L P +P S E+ K L D+ +
Sbjct: 472 LDSESARTPAFL---ALHAVKALAIMLYPIIPRSSQEMWKLLGY--------KDDIAN-H 519
Query: 557 RARKPWEILPAGHRIGMSSPLFKELKDEDVRFFREKFAGSQADRA 601
R + E +P G + PLF+++ +E+++ EK +A R+
Sbjct: 520 RWHEINEAVPPGQELPSPRPLFRKISEEELKAAVEKIEELRASRS 564
>sp|B1L7J9|SYM_KORCO Methionine--tRNA ligase OS=Korarchaeum cryptofilum (strain OPF8)
GN=metG PE=3 SV=1
Length = 559
Score = 374 bits (961), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/569 (35%), Positives = 324/569 (56%), Gaps = 42/569 (7%)
Query: 28 LITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNALYICGTDEYGTATETKAMEEN 87
++ SA PY+N VPHLG ++ VLS+DVFAR+ R G +++ G+DE+GT E +A+ +
Sbjct: 4 IVASAWPYINAVPHLGTLVQ-VLSSDVFARFLRKMGEEVVFVSGSDEHGTPIEIEAIRKG 62
Query: 88 CTTQQICDKYYAIHKAVYNWFNISFDEFGRTSTPQQTEICQAIFKKLLENNWLSEYTTQQ 147
+ + DK +A ++ F IS+D + RT + E + + K+ + E T+Q
Sbjct: 63 IAPRDLTDKMHAYITWLFESFGISYDNYTRTESDVHKEFVRDFYLKVYNEGHIFERETEQ 122
Query: 148 LYCDTCKRFLADRLVEGSCPTLGCNYDSARGDQCEKCGKLLNPTELKDPRCKVCQATPKI 207
LYC + FL DR V G+CP C Y+ A GDQC++CG+LLNPT+L DP+C +C + P++
Sbjct: 123 LYCPKDEMFLPDRFVTGTCPY--CGYERAHGDQCDRCGRLLNPTDLIDPKCSICGSVPEM 180
Query: 208 RDTDHLFLELPLIKDKLEEYINKMSVSGSWSQNAIQGTYAWLKDGLKPRCITRDLKWGVP 267
R T H F +LP ++L +YI + + + +NA + + +++GL+PR +TRD KWG+P
Sbjct: 181 RRTKHWFFDLPKFSERLRKYIEE---NENLPENAKTLSLSMIEEGLRPRSLTRDNKWGIP 237
Query: 268 VPHEKFKDKVFYVWFDAPIGYISITSCY------TPDWEEWWKNPENVALYQFMGKDNAP 321
P + K YVW +A +GY+S Y +EE+WK+ + ++Y F+GKDN P
Sbjct: 238 APFPGSEGKTIYVWMEAVLGYVSAVKEYFLKRGEAERFEEFWKSGDTRSVY-FIGKDNIP 296
Query: 322 FHTVMFPSTLLGTEENWTLMKTISVTEYLNYEAGKFSKSKGVGVFGNDVKDTNIPAEVWR 381
FHT++FP+ L+ + E + L +++ TE+L YE KFSKS+ G++ ++ +PA+ WR
Sbjct: 297 FHTIIFPALLMASGEGYALPFSVASTEFLLYEGEKFSKSERRGIWMDEALQL-LPADYWR 355
Query: 382 YYLITNRPEVSDTLFTWEDFQAKLNTELLNNLGNFVNRVLSFIAKPPGRGYGSIIPDSPK 441
+Y+I RPE+ D F+WEDF++K+N EL + +GN V+R+LSFIA Y IP
Sbjct: 356 FYMIYMRPELKDASFSWEDFESKVNDELNDTIGNLVHRILSFIAS----RYSGQIPSVEL 411
Query: 442 ADLHPSTKMLAEKISNHIDQYIEAMEKVKLKQGLRIGMSISSEGNAYLQESQFWKLYNED 501
+ M +I I+ E + K+KL+ LR + ++ GN + + WK + +
Sbjct: 412 DEEASGFLMRVREIGREIE---ENLMKIKLRDALRSLIEMARLGNKFFNNREPWKDFESN 468
Query: 502 QGSCSIVIRTSVGLVYLLACLLEPFMPSFSLEVLKQLNVPTE----TKFSLSDENGDLER 557
+G I S L+ +LA + FMPS + ++ K L + E FS D NG
Sbjct: 469 RGRADSTILASYILLKILAFYMHIFMPSSAEKLWKMLGLEGEPEDRVAFSYHD-NG---- 523
Query: 558 ARKPWEILPAGHRIGMSSPLFKELKDEDV 586
++ PLF+++K E++
Sbjct: 524 ------------KVSSLEPLFRKIKKEEL 540
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 246,291,584
Number of Sequences: 539616
Number of extensions: 10879356
Number of successful extensions: 32775
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 792
Number of HSP's successfully gapped in prelim test: 770
Number of HSP's that attempted gapping in prelim test: 28338
Number of HSP's gapped (non-prelim): 2303
length of query: 625
length of database: 191,569,459
effective HSP length: 124
effective length of query: 501
effective length of database: 124,657,075
effective search space: 62453194575
effective search space used: 62453194575
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)