BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006922
(625 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 90/274 (32%), Positives = 148/274 (54%), Gaps = 12/274 (4%)
Query: 331 VLGKGTFGMAYKAILEDGTTVVVKRLKDVNV--GKRDFEQQMEIVGSIRHENVVELKAYY 388
+LG+G FG YK L DGT V VKRLK+ G+ F+ ++E++ H N++ L+ +
Sbjct: 45 ILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFC 104
Query: 389 YSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKL 448
+ E+L+VY Y + GSV++ L ER E + PLDW K+
Sbjct: 105 MTPTERLLVYPYMANGSVASCLR-ERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKI 163
Query: 449 VHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA----GYRAPEVTDSRKATQA 504
+H ++K++NI L+ + V D GL + + A G+ APE + K+++
Sbjct: 164 IHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEK 223
Query: 505 SDVYSFGVVLLEILTGKSPIHTT--GGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNI 562
+DV+ +GV+LLE++TG+ D+ V L+ WV +++E+ + DV+L N
Sbjct: 224 TDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDL--QGNY 281
Query: 563 EEEMVEML-QIAMSCVVRMPDQRPKMPDVVRVIE 595
++E VE L Q+A+ C P +RPKM +VVR++E
Sbjct: 282 KDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 148/275 (53%), Gaps = 12/275 (4%)
Query: 331 VLGKGTFGMAYKAILEDGTTVVVKRLKDVNV--GKRDFEQQMEIVGSIRHENVVELKAYY 388
+LG+G FG YK L DG V VKRLK+ G+ F+ ++E++ H N++ L+ +
Sbjct: 37 ILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 96
Query: 389 YSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKL 448
+ E+L+VY Y + GSV++ L ER E + PLDW K+
Sbjct: 97 MTPTERLLVYPYMANGSVASCLR-ERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKI 155
Query: 449 VHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA----GYRAPEVTDSRKATQA 504
+H ++K++NI L+ + V D GL + + A G+ APE + K+++
Sbjct: 156 IHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEK 215
Query: 505 SDVYSFGVVLLEILTGKSP--IHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNI 562
+DV+ +GV+LLE++TG+ + D+ V L+ WV +++E+ + DV+L N
Sbjct: 216 TDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDL--QGNY 273
Query: 563 EEEMVEML-QIAMSCVVRMPDQRPKMPDVVRVIEN 596
++E VE L Q+A+ C P +RPKM +VVR++E
Sbjct: 274 KDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 98/199 (49%), Gaps = 17/199 (8%)
Query: 332 LGKGTFGMAYKAILEDGTTVVVKRLK---DVNVG--KRDFEQQMEIVGSIRHENVVELKA 386
+G+G FG+ YK + + TTV VK+L D+ K+ F+Q+++++ +HEN+VEL
Sbjct: 39 MGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 97
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXX 446
+ D+ +VY Y GS+ L +G PL W
Sbjct: 98 FSSDGDDLCLVYVYMPNGSLLDRLSCL--DGTPPLSWHMRCKIAQGAANGINFLHENHH- 154
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVI--ARAAG---YRAPEVTDSRKA 501
+H +IKS+NI L+ +SD GL + A + +R G Y APE +
Sbjct: 155 --IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRG-EI 211
Query: 502 TQASDVYSFGVVLLEILTG 520
T SD+YSFGVVLLEI+TG
Sbjct: 212 TPKSDIYSFGVVLLEIITG 230
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 95/199 (47%), Gaps = 17/199 (8%)
Query: 332 LGKGTFGMAYKAILEDGTTVVVKRLK---DVNVG--KRDFEQQMEIVGSIRHENVVELKA 386
+G+G FG+ YK + + TTV VK+L D+ K+ F+Q+++++ +HEN+VEL
Sbjct: 39 MGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 97
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXX 446
+ D+ +VY Y GS+ L +G PL W
Sbjct: 98 FSSDGDDLCLVYVYMPNGSLLDRLSCL--DGTPPLSWHMRCKIAQGAANGINFLHENHH- 154
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPV-----IARAAGYRAPEVTDSRKA 501
+H +IKS+NI L+ +SD GL + A I Y APE +
Sbjct: 155 --IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALRG-EI 211
Query: 502 TQASDVYSFGVVLLEILTG 520
T SD+YSFGVVLLEI+TG
Sbjct: 212 TPKSDIYSFGVVLLEIITG 230
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 95/199 (47%), Gaps = 17/199 (8%)
Query: 332 LGKGTFGMAYKAILEDGTTVVVKRLK---DVNVG--KRDFEQQMEIVGSIRHENVVELKA 386
+G+G FG+ YK + + TTV VK+L D+ K+ F+Q+++++ +HEN+VEL
Sbjct: 33 MGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 91
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXX 446
+ D+ +VY Y GS+ L +G PL W
Sbjct: 92 FSSDGDDLCLVYVYMPNGSLLDRLSCL--DGTPPLSWHMRCKIAQGAANGINFLHENHH- 148
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPV-----IARAAGYRAPEVTDSRKA 501
+H +IKS+NI L+ +SD GL + A I Y APE +
Sbjct: 149 --IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALRG-EI 205
Query: 502 TQASDVYSFGVVLLEILTG 520
T SD+YSFGVVLLEI+TG
Sbjct: 206 TPKSDIYSFGVVLLEIITG 224
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 123/276 (44%), Gaps = 21/276 (7%)
Query: 331 VLGKGTFGMAYKAILEDGTTVVVKR-LKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYY 389
++G G FG YK +L DG V +KR + + G +FE ++E + RH ++V L +
Sbjct: 46 LIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCD 105
Query: 390 SKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLV 449
++E +++Y Y G++ L+ + + W+ ++
Sbjct: 106 ERNEMILIYKYMENGNLKRHLYGS-DLPTMSMSWEQRLEICIGAARGLHYLHTRA---II 161
Query: 450 HGNIKSSNIFLNSQQYGCVSDLGLTTITSALAP-----VIARAAGYRAPEVTDSRKATQA 504
H ++KS NI L+ ++D G++ + L V+ GY PE + T+
Sbjct: 162 HRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEK 221
Query: 505 SDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIE- 563
SDVYSFGVVL E+L +S I + E+V+L W ++ D PN+
Sbjct: 222 SDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVD------PNLAD 275
Query: 564 ----EEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIE 595
E + + A+ C+ + RP M DV+ +E
Sbjct: 276 KIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 123/276 (44%), Gaps = 21/276 (7%)
Query: 331 VLGKGTFGMAYKAILEDGTTVVVKR-LKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYY 389
++G G FG YK +L DG V +KR + + G +FE ++E + RH ++V L +
Sbjct: 46 LIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCD 105
Query: 390 SKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLV 449
++E +++Y Y G++ L+ + + W+ ++
Sbjct: 106 ERNEMILIYKYMENGNLKRHLYGS-DLPTMSMSWEQRLEICIGAARGLHYLHTRA---II 161
Query: 450 HGNIKSSNIFLNSQQYGCVSDLGLTTI-----TSALAPVIARAAGYRAPEVTDSRKATQA 504
H ++KS NI L+ ++D G++ + L V+ GY PE + T+
Sbjct: 162 HRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEK 221
Query: 505 SDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIE- 563
SDVYSFGVVL E+L +S I + E+V+L W ++ D PN+
Sbjct: 222 SDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVD------PNLAD 275
Query: 564 ----EEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIE 595
E + + A+ C+ + RP M DV+ +E
Sbjct: 276 KIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 96/198 (48%), Gaps = 17/198 (8%)
Query: 333 GKGTFGMAYKAILEDGTTVVVKRLK---DVNVG--KRDFEQQMEIVGSIRHENVVELKAY 387
G+G FG+ YK + + TTV VK+L D+ K+ F+Q++++ +HEN+VEL +
Sbjct: 31 GEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGF 89
Query: 388 YYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXK 447
D+ +VY Y GS+ L +G PL W
Sbjct: 90 SSDGDDLCLVYVYXPNGSLLDRLSCL--DGTPPLSWHXRCKIAQGAANGINFLHENHH-- 145
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVI--ARAAG---YRAPEVTDSRKAT 502
+H +IKS+NI L+ +SD GL + A + +R G Y APE + T
Sbjct: 146 -IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALRG-EIT 203
Query: 503 QASDVYSFGVVLLEILTG 520
SD+YSFGVVLLEI+TG
Sbjct: 204 PKSDIYSFGVVLLEIITG 221
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 83/162 (51%), Gaps = 7/162 (4%)
Query: 26 EDKEALLDFVNNLPHSRSLN-WNESTSVCNH-WTGVKCSEDGK--RVVAVRLPGVGFSGL 81
+DK+ALL +L + +L+ W +T CN W GV C D + RV + L G+
Sbjct: 6 QDKQALLQIKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKP 65
Query: 82 IP-PNTISRLSALKILSLRS-NVITGYFPSDFINLKSLCYLYLQFNNFSGTLPDF-SVWK 138
P P++++ L L L + N + G P L L YLY+ N SG +PDF S K
Sbjct: 66 YPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIK 125
Query: 139 NLTIINLSDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPD 180
L ++ S N +GT+P S+S+L L + N +SG IPD
Sbjct: 126 TLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPD 167
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 56/102 (54%), Gaps = 2/102 (1%)
Query: 78 FSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLPDFSVW 137
+G IPP T + L+ L + L N++ G F + K+ ++L N+ + L +
Sbjct: 186 LTGKIPP-TFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLS 243
Query: 138 KNLTIINLSDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIP 179
KNL ++L +N GT+P+ L+ L L +L ++ N+L G+IP
Sbjct: 244 KNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 117/288 (40%), Gaps = 39/288 (13%)
Query: 330 EVLGKGTFGMAYKAILEDGT-----TVVVKRLKDVNVGKR--DFEQQMEIVGSIRHENVV 382
+V+G G FG YK +L+ + V +K LK K+ DF + I+G H N++
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNII 109
Query: 383 ELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXX 442
L+ +++ +Y G++ L + GE +
Sbjct: 110 RLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSV-------LQLVGMLRGIAAGMKY 162
Query: 443 XXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG------YRAPEVT 496
VH ++ + NI +NS VSD GL+ + +G + APE
Sbjct: 163 LANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAI 222
Query: 497 DSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVE 555
RK T ASDV+SFG+V+ E++T G+ P E++ + +
Sbjct: 223 SYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAIN-----------------D 265
Query: 556 LLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIEN-VRPNDS 602
R P + + Q+ M C + +RPK D+V +++ +R DS
Sbjct: 266 GFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDS 313
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 128/300 (42%), Gaps = 52/300 (17%)
Query: 330 EVLGKGTFG---MAYKAILED--GTTVVVKRLKDVNVGK-RDFEQQMEIVGSIRHENVVE 383
+ LGKG FG M L+D G V VK+L+ RDFE+++EI+ S++H+N+V+
Sbjct: 17 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 76
Query: 384 LKAYYYSKDEK--LMVYDYYSLGSVSAML--HSERGEGRIPLDWDTXXXXXXXXXXXXXX 439
K YS + ++ +Y GS+ L H ER + L + +
Sbjct: 77 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS---------QICKG 127
Query: 440 XXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVI-ARAAG-----YRAP 493
+ +H N+ + NI + ++ + D GLT + + G + AP
Sbjct: 128 MEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAP 187
Query: 494 EVTDSRKATQASDVYSFGVVLLEILT----GKSP----IHTTGGDELVHLVRWVHSVVRE 545
E K + ASDV+SFGVVL E+ T KSP + G D+ ++
Sbjct: 188 ESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI--------- 238
Query: 546 EWTAEVFD-VELL----RYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600
VF +ELL R P + E+ I C +QRP D+ ++ +R N
Sbjct: 239 -----VFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 293
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 128/300 (42%), Gaps = 52/300 (17%)
Query: 330 EVLGKGTFG---MAYKAILED--GTTVVVKRLKD-VNVGKRDFEQQMEIVGSIRHENVVE 383
+ LGKG FG M L+D G V VK+L+ RDFE+++EI+ S++H+N+V+
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 384 LKAYYYSKDEK--LMVYDYYSLGSVSAML--HSERGEGRIPLDWDTXXXXXXXXXXXXXX 439
K YS + ++ +Y GS+ L H ER + L + +
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS---------QICKG 126
Query: 440 XXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVI-ARAAG-----YRAP 493
+ +H ++ + NI + ++ + D GLT + + G + AP
Sbjct: 127 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAP 186
Query: 494 EVTDSRKATQASDVYSFGVVLLEILT----GKSP----IHTTGGDELVHLVRWVHSVVRE 545
E K + ASDV+SFGVVL E+ T KSP + G D+ ++
Sbjct: 187 ESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI--------- 237
Query: 546 EWTAEVFD-VELL----RYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600
VF +ELL R P + E+ I C +QRP D+ ++ +R N
Sbjct: 238 -----VFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 128/298 (42%), Gaps = 52/298 (17%)
Query: 332 LGKGTFG---MAYKAILED--GTTVVVKRLKDVNVGK-RDFEQQMEIVGSIRHENVVELK 385
LGKG FG M L+D G V VK+L+ RDFE+++EI+ S++H+N+V+ K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 386 AYYYSKDEK--LMVYDYYSLGSVSAML--HSERGEGRIPLDWDTXXXXXXXXXXXXXXXX 441
YS + ++ +Y GS+ L H+ER + L + +
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTS---------QICKGME 131
Query: 442 XXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVI-ARAAG-----YRAPEV 495
+ +H ++ + NI + ++ + D GLT + + G + APE
Sbjct: 132 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 496 TDSRKATQASDVYSFGVVLLEILT----GKSP----IHTTGGDELVHLVRWVHSVVREEW 547
K + ASDV+SFGVVL E+ T KSP + G D+ ++
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI----------- 240
Query: 548 TAEVFD-VELL----RYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600
VF +ELL R P + E+ I C +QRP D+ ++ +R N
Sbjct: 241 ---VFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 295
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 128/300 (42%), Gaps = 52/300 (17%)
Query: 330 EVLGKGTFG---MAYKAILED--GTTVVVKRLKDVNVGK-RDFEQQMEIVGSIRHENVVE 383
+ LGKG FG M L+D G V VK+L+ RDFE+++EI+ S++H+N+V+
Sbjct: 23 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 82
Query: 384 LKAYYYSKDEK--LMVYDYYSLGSVSAML--HSERGEGRIPLDWDTXXXXXXXXXXXXXX 439
K YS + ++ +Y GS+ L H ER + L + +
Sbjct: 83 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS---------QICKG 133
Query: 440 XXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVI-ARAAG-----YRAP 493
+ +H ++ + NI + ++ + D GLT + + G + AP
Sbjct: 134 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 193
Query: 494 EVTDSRKATQASDVYSFGVVLLEILT----GKSP----IHTTGGDELVHLVRWVHSVVRE 545
E K + ASDV+SFGVVL E+ T KSP + G D+ ++
Sbjct: 194 ESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI--------- 244
Query: 546 EWTAEVFD-VELL----RYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600
VF +ELL R P + E+ I C +QRP D+ ++ +R N
Sbjct: 245 -----VFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 299
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 128/300 (42%), Gaps = 52/300 (17%)
Query: 330 EVLGKGTFG---MAYKAILED--GTTVVVKRLKDVNVGK-RDFEQQMEIVGSIRHENVVE 383
+ LGKG FG M L+D G V VK+L+ RDFE+++EI+ S++H+N+V+
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 384 LKAYYYSKDEK--LMVYDYYSLGSVSAML--HSERGEGRIPLDWDTXXXXXXXXXXXXXX 439
K YS + ++ +Y GS+ L H ER + L + +
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS---------QICKG 126
Query: 440 XXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVI-ARAAG-----YRAP 493
+ +H ++ + NI + ++ + D GLT + + G + AP
Sbjct: 127 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 186
Query: 494 EVTDSRKATQASDVYSFGVVLLEILT----GKSP----IHTTGGDELVHLVRWVHSVVRE 545
E K + ASDV+SFGVVL E+ T KSP + G D+ ++
Sbjct: 187 ESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI--------- 237
Query: 546 EWTAEVFD-VELL----RYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600
VF +ELL R P + E+ I C +QRP D+ ++ +R N
Sbjct: 238 -----VFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 128/300 (42%), Gaps = 52/300 (17%)
Query: 330 EVLGKGTFG---MAYKAILED--GTTVVVKRLKDVNVGK-RDFEQQMEIVGSIRHENVVE 383
+ LGKG FG M L+D G V VK+L+ RDFE+++EI+ S++H+N+V+
Sbjct: 21 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 80
Query: 384 LKAYYYSKDEK--LMVYDYYSLGSVSAML--HSERGEGRIPLDWDTXXXXXXXXXXXXXX 439
K YS + ++ +Y GS+ L H ER + L + +
Sbjct: 81 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS---------QICKG 131
Query: 440 XXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVI-ARAAG-----YRAP 493
+ +H ++ + NI + ++ + D GLT + + G + AP
Sbjct: 132 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 191
Query: 494 EVTDSRKATQASDVYSFGVVLLEILT----GKSP----IHTTGGDELVHLVRWVHSVVRE 545
E K + ASDV+SFGVVL E+ T KSP + G D+ ++
Sbjct: 192 ESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI--------- 242
Query: 546 EWTAEVFD-VELL----RYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600
VF +ELL R P + E+ I C +QRP D+ ++ +R N
Sbjct: 243 -----VFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 297
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 128/300 (42%), Gaps = 52/300 (17%)
Query: 330 EVLGKGTFG---MAYKAILED--GTTVVVKRLKDVNVGK-RDFEQQMEIVGSIRHENVVE 383
+ LGKG FG M L+D G V VK+L+ RDFE+++EI+ S++H+N+V+
Sbjct: 22 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 81
Query: 384 LKAYYYSKDEK--LMVYDYYSLGSVSAML--HSERGEGRIPLDWDTXXXXXXXXXXXXXX 439
K YS + ++ +Y GS+ L H ER + L + +
Sbjct: 82 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS---------QICKG 132
Query: 440 XXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVI-ARAAG-----YRAP 493
+ +H ++ + NI + ++ + D GLT + + G + AP
Sbjct: 133 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 192
Query: 494 EVTDSRKATQASDVYSFGVVLLEILT----GKSP----IHTTGGDELVHLVRWVHSVVRE 545
E K + ASDV+SFGVVL E+ T KSP + G D+ ++
Sbjct: 193 ESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI--------- 243
Query: 546 EWTAEVFD-VELL----RYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600
VF +ELL R P + E+ I C +QRP D+ ++ +R N
Sbjct: 244 -----VFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 298
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 128/300 (42%), Gaps = 52/300 (17%)
Query: 330 EVLGKGTFG---MAYKAILED--GTTVVVKRLKDVNVGK-RDFEQQMEIVGSIRHENVVE 383
+ LGKG FG M L+D G V VK+L+ RDFE+++EI+ S++H+N+V+
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 384 LKAYYYSKDEK--LMVYDYYSLGSVSAML--HSERGEGRIPLDWDTXXXXXXXXXXXXXX 439
K YS + ++ +Y GS+ L H ER + L + +
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS---------QICKG 129
Query: 440 XXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVI-ARAAG-----YRAP 493
+ +H ++ + NI + ++ + D GLT + + G + AP
Sbjct: 130 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 189
Query: 494 EVTDSRKATQASDVYSFGVVLLEILT----GKSP----IHTTGGDELVHLVRWVHSVVRE 545
E K + ASDV+SFGVVL E+ T KSP + G D+ ++
Sbjct: 190 ESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI--------- 240
Query: 546 EWTAEVFD-VELL----RYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600
VF +ELL R P + E+ I C +QRP D+ ++ +R N
Sbjct: 241 -----VFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 295
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 127/298 (42%), Gaps = 52/298 (17%)
Query: 332 LGKGTFG---MAYKAILED--GTTVVVKRLKDVNVGK-RDFEQQMEIVGSIRHENVVELK 385
LGKG FG M L+D G V VK+L+ RDFE+++EI+ S++H+N+V+ K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 386 AYYYSKDEK--LMVYDYYSLGSVSAML--HSERGEGRIPLDWDTXXXXXXXXXXXXXXXX 441
YS + ++ +Y GS+ L H ER + L + +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS---------QICKGME 128
Query: 442 XXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVI-ARAAG-----YRAPEV 495
+ +H ++ + NI + ++ + D GLT + + G + APE
Sbjct: 129 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 188
Query: 496 TDSRKATQASDVYSFGVVLLEILT----GKSP----IHTTGGDELVHLVRWVHSVVREEW 547
K + ASDV+SFGVVL E+ T KSP + G D+ ++
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI----------- 237
Query: 548 TAEVFD-VELL----RYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600
VF +ELL R P + E+ I C +QRP D+ ++ +R N
Sbjct: 238 ---VFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 127/298 (42%), Gaps = 52/298 (17%)
Query: 332 LGKGTFG---MAYKAILED--GTTVVVKRLKD-VNVGKRDFEQQMEIVGSIRHENVVELK 385
LGKG FG M L+D G V VK+L+ RDFE+++EI+ S++H+N+V+ K
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 386 AYYYSKDEK--LMVYDYYSLGSVSAML--HSERGEGRIPLDWDTXXXXXXXXXXXXXXXX 441
YS + ++ +Y GS+ L H ER + L + +
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS---------QICKGME 127
Query: 442 XXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVI-ARAAG-----YRAPEV 495
+ +H ++ + NI + ++ + D GLT + + G + APE
Sbjct: 128 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 187
Query: 496 TDSRKATQASDVYSFGVVLLEILT----GKSP----IHTTGGDELVHLVRWVHSVVREEW 547
K + ASDV+SFGVVL E+ T KSP + G D+ ++
Sbjct: 188 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI----------- 236
Query: 548 TAEVFD-VELL----RYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600
VF +ELL R P + E+ I C +QRP D+ ++ +R N
Sbjct: 237 ---VFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 291
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 128/300 (42%), Gaps = 52/300 (17%)
Query: 330 EVLGKGTFG---MAYKAILED--GTTVVVKRLKDVNVGK-RDFEQQMEIVGSIRHENVVE 383
+ LGKG FG M L+D G V VK+L+ RDFE+++EI+ S++H+N+V+
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 384 LKAYYYSKDEK--LMVYDYYSLGSVSAML--HSERGEGRIPLDWDTXXXXXXXXXXXXXX 439
K YS + ++ +Y GS+ L H ER + L + +
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS---------QICKG 144
Query: 440 XXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVI-ARAAG-----YRAP 493
+ +H ++ + NI + ++ + D GLT + + G + AP
Sbjct: 145 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 204
Query: 494 EVTDSRKATQASDVYSFGVVLLEILT----GKSP----IHTTGGDELVHLVRWVHSVVRE 545
E K + ASDV+SFGVVL E+ T KSP + G D+ ++
Sbjct: 205 ESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI--------- 255
Query: 546 EWTAEVFD-VELL----RYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600
VF +ELL R P + E+ I C +QRP D+ ++ +R N
Sbjct: 256 -----VFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 310
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 127/298 (42%), Gaps = 52/298 (17%)
Query: 332 LGKGTFG---MAYKAILED--GTTVVVKRLKDVNVGK-RDFEQQMEIVGSIRHENVVELK 385
LGKG FG M L+D G V VK+L+ RDFE+++EI+ S++H+N+V+ K
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 386 AYYYSKDEK--LMVYDYYSLGSVSAML--HSERGEGRIPLDWDTXXXXXXXXXXXXXXXX 441
YS + ++ +Y GS+ L H ER + L + +
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS---------QICKGME 132
Query: 442 XXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVI-ARAAG-----YRAPEV 495
+ +H ++ + NI + ++ + D GLT + + G + APE
Sbjct: 133 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 192
Query: 496 TDSRKATQASDVYSFGVVLLEILT----GKSP----IHTTGGDELVHLVRWVHSVVREEW 547
K + ASDV+SFGVVL E+ T KSP + G D+ ++
Sbjct: 193 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI----------- 241
Query: 548 TAEVFD-VELL----RYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600
VF +ELL R P + E+ I C +QRP D+ ++ +R N
Sbjct: 242 ---VFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 296
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 128/300 (42%), Gaps = 52/300 (17%)
Query: 330 EVLGKGTFG---MAYKAILED--GTTVVVKRLKDVNVGK-RDFEQQMEIVGSIRHENVVE 383
+ LGKG FG M L+D G V VK+L+ RDFE+++EI+ S++H+N+V+
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 384 LKAYYYSKDEK--LMVYDYYSLGSVSAML--HSERGEGRIPLDWDTXXXXXXXXXXXXXX 439
K YS + ++ +Y GS+ L H ER + L + +
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS---------QICKG 144
Query: 440 XXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVI-ARAAG-----YRAP 493
+ +H ++ + NI + ++ + D GLT + + G + AP
Sbjct: 145 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 204
Query: 494 EVTDSRKATQASDVYSFGVVLLEILT----GKSP----IHTTGGDELVHLVRWVHSVVRE 545
E K + ASDV+SFGVVL E+ T KSP + G D+ ++
Sbjct: 205 ESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI--------- 255
Query: 546 EWTAEVFD-VELL----RYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600
VF +ELL R P + E+ I C +QRP D+ ++ +R N
Sbjct: 256 -----VFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 310
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 92/200 (46%), Gaps = 10/200 (5%)
Query: 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKR---DFEQQMEIVGSIRHENVVELKA 386
E +G G+FG ++A G+ V VK L + + +F +++ I+ +RH N+V
Sbjct: 43 EKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMG 101
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXX 446
+V +Y S GS+ +LH + R LD +
Sbjct: 102 AVTQPPNLSIVTEYLSRGSLYRLLH--KSGAREQLD-ERRRLSMAYDVAKGMNYLHNRNP 158
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG---YRAPEVTDSRKATQ 503
+VH N+KS N+ ++ + V D GL+ + ++ AAG + APEV + +
Sbjct: 159 PIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNE 218
Query: 504 ASDVYSFGVVLLEILTGKSP 523
SDVYSFGV+L E+ T + P
Sbjct: 219 KSDVYSFGVILWELATLQQP 238
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 127/298 (42%), Gaps = 52/298 (17%)
Query: 332 LGKGTFG---MAYKAILED--GTTVVVKRLKDVNVGK-RDFEQQMEIVGSIRHENVVELK 385
LGKG FG M L+D G V VK+L+ RDFE+++EI+ S++H+N+V+ K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 386 AYYYSKDEK--LMVYDYYSLGSVSAML--HSERGEGRIPLDWDTXXXXXXXXXXXXXXXX 441
YS + ++ ++ GS+ L H ER + L + +
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTS---------QICKGME 131
Query: 442 XXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVI-ARAAG-----YRAPEV 495
+ +H ++ + NI + ++ + D GLT + + G + APE
Sbjct: 132 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 496 TDSRKATQASDVYSFGVVLLEILT----GKSP----IHTTGGDELVHLVRWVHSVVREEW 547
K + ASDV+SFGVVL E+ T KSP + G D+ ++
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI----------- 240
Query: 548 TAEVFD-VELL----RYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600
VF +ELL R P + E+ I C +QRP D+ ++ +R N
Sbjct: 241 ---VFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 295
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 94/200 (47%), Gaps = 10/200 (5%)
Query: 330 EVLGKGTFGMAYKAILEDGTTVVVKRL--KDVNVGK-RDFEQQMEIVGSIRHENVVELKA 386
E +G G+FG ++A G+ V VK L +D + + +F +++ I+ +RH N+V
Sbjct: 43 EKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMG 101
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXX 446
+V +Y S GS+ +LH + R LD +
Sbjct: 102 AVTQPPNLSIVTEYLSRGSLYRLLH--KSGAREQLD-ERRRLSMAYDVAKGMNYLHNRNP 158
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG---YRAPEVTDSRKATQ 503
+VH ++KS N+ ++ + V D GL+ + ++ AAG + APEV + +
Sbjct: 159 PIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDEPSNE 218
Query: 504 ASDVYSFGVVLLEILTGKSP 523
SDVYSFGV+L E+ T + P
Sbjct: 219 KSDVYSFGVILWELATLQQP 238
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 127/298 (42%), Gaps = 52/298 (17%)
Query: 330 EVLGKGTFG---MAYKAILED--GTTVVVKRLKDVNVGK-RDFEQQMEIVGSIRHENVVE 383
+ LGKG FG M L+D G V VK+L+ RDFE+++EI+ S++H+N+V+
Sbjct: 47 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 106
Query: 384 LKAYYYSKDEK--LMVYDYYSLGSVSAML--HSERGEGRIPLDWDTXXXXXXXXXXXXXX 439
K YS + ++ +Y GS+ L H ER + L + +
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS---------QICKG 157
Query: 440 XXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVI-ARAAG-----YRAP 493
+ +H ++ + NI + ++ + D GLT + + G + AP
Sbjct: 158 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 217
Query: 494 EVTDSRKATQASDVYSFGVVLLEILT----GKSP----IHTTGGDELVHLVRWVHSVVRE 545
E K + ASDV+SFGVVL E+ T KSP + G D+ ++
Sbjct: 218 ESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI--------- 268
Query: 546 EWTAEVFD-VELL----RYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVR 598
VF +ELL R P + E+ I C +QRP D+ ++ +R
Sbjct: 269 -----VFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 321
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 126/296 (42%), Gaps = 52/296 (17%)
Query: 332 LGKGTFG---MAYKAILED--GTTVVVKRLKD-VNVGKRDFEQQMEIVGSIRHENVVELK 385
LGKG FG M L+D G V VK+L+ RDFE+++EI+ S++H+N+V+ K
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 386 AYYYSKDEK--LMVYDYYSLGSVSAML--HSERGEGRIPLDWDTXXXXXXXXXXXXXXXX 441
YS + ++ +Y GS+ L H ER + L + +
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS---------QICKGME 126
Query: 442 XXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVI-ARAAG-----YRAPEV 495
+ +H ++ + NI + ++ + D GLT + + G + APE
Sbjct: 127 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 186
Query: 496 TDSRKATQASDVYSFGVVLLEILT----GKSP----IHTTGGDELVHLVRWVHSVVREEW 547
K + ASDV+SFGVVL E+ T KSP + G D+ ++
Sbjct: 187 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI----------- 235
Query: 548 TAEVFD-VELL----RYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVR 598
VF +ELL R P + E+ I C +QRP D+ ++ +R
Sbjct: 236 ---VFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 288
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 111/283 (39%), Gaps = 37/283 (13%)
Query: 331 VLGKGTFGMAYKAILE-DGTTVVVKRLKDVNVG-----KRDFEQQMEIVGSIRHENVVEL 384
V+G G FG L+ G V +K + VG +RDF + I+G H NVV L
Sbjct: 50 VIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHL 109
Query: 385 KAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXX 444
+ ++V ++ G++ A L G+ T
Sbjct: 110 EGVVTRGKPVMIVIEFMENGALDAFLRKHDGQF-------TVIQLVGMLRGIAAGMRYLA 162
Query: 445 XXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG------YRAPEVTDS 498
VH ++ + NI +NS VSD GL+ + + G + APE
Sbjct: 163 DMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQY 222
Query: 499 RKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELL 557
RK T ASDV+S+G+V+ E+++ G+ P +++ + E
Sbjct: 223 RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIE-----------------EGY 265
Query: 558 RYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600
R P + + Q+ + C + +RPK +V +++ + N
Sbjct: 266 RLPAPMDCPAGLHQLMLDCWQKERAERPKFEQIVGILDKMIRN 308
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 115/287 (40%), Gaps = 41/287 (14%)
Query: 332 LGKGTFGMAYKAIL------EDGTTVVVKRLKDV-NVGKRDFEQQMEIVGSIRHENVVEL 384
LG+G FG + A +D V VK LKD + ++DF ++ E++ +++HE++V+
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 385 KAYYYSKDEKLMVYDYYSLGSVSAMLHSE------RGEGRIPLDWDTXXXXXXXXXXXXX 438
D +MV++Y G ++ L + EG P + T
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTEL-TQSQMLHIAQQIAA 139
Query: 439 XXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-------YR 491
VH ++ + N + + D G++ + R G +
Sbjct: 140 GMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMS--RDVYSTDYYRVGGHTMLPIRWM 197
Query: 492 APEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAE 550
PE RK T SDV+S GVVL EI T GK P + +E++ +
Sbjct: 198 PPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECIT------------- 244
Query: 551 VFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
+L+ P + E+ ++ + C R P R + + +++N+
Sbjct: 245 --QGRVLQRPRTCPQ--EVYELMLGCWQREPHMRKNIKGIHTLLQNL 287
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 116/273 (42%), Gaps = 36/273 (13%)
Query: 331 VLGKGTFGMAYKA-ILEDGTTVVVKRLKDVNVG-KRDFEQQMEIVGSIRHENVVELKAYY 388
VLGKGT+G+ Y L + + +K + + + + +++ + ++H+N+V+ +
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 389 YSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKL 448
+ + GS+SA+L S+ G PL D ++
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSKWG----PLK-DNEQTIGFYTKQILEGLKYLHDNQI 143
Query: 449 VHGNIKSSNIFLNSQQYGCV---SDLGLTTITSALAPVIARAAG---YRAPEVTDS--RK 500
VH +IK N+ +N+ Y V SD G + + + P G Y APE+ D R
Sbjct: 144 VHRDIKGDNVLINT--YSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRG 201
Query: 501 ATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLR-Y 559
+A+D++S G ++E+ TGK P + G E A +F V + + +
Sbjct: 202 YGKAADIWSLGCTIIEMATGKPPFYELG-----------------EPQAAMFKVGMFKVH 244
Query: 560 PNIEEEM-VEMLQIAMSCVVRMPDQRPKMPDVV 591
P I E M E + C PD+R D++
Sbjct: 245 PEIPESMSAEAKAFILKCFEPDPDKRACANDLL 277
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 116/272 (42%), Gaps = 34/272 (12%)
Query: 331 VLGKGTFGMAYKA-ILEDGTTVVVKRLKDVNVG-KRDFEQQMEIVGSIRHENVVELKAYY 388
VLGKGT+G+ Y L + + +K + + + + +++ + ++H+N+V+ +
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 389 YSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKL 448
+ + GS+SA+L S+ G PL D ++
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSKWG----PLK-DNEQTIGFYTKQILEGLKYLHDNQI 129
Query: 449 VHGNIKSSNIFLNSQQYGC--VSDLGLTTITSALAPVIARAAG---YRAPEVTDS--RKA 501
VH +IK N+ +N+ G +SD G + + + P G Y APE+ D R
Sbjct: 130 VHRDIKGDNVLINTYS-GVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGY 188
Query: 502 TQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLR-YP 560
+A+D++S G ++E+ TGK P + G E A +F V + + +P
Sbjct: 189 GKAADIWSLGCTIIEMATGKPPFYELG-----------------EPQAAMFKVGMFKVHP 231
Query: 561 NIEEEM-VEMLQIAMSCVVRMPDQRPKMPDVV 591
I E M E + C PD+R D++
Sbjct: 232 EIPESMSAEAKAFILKCFEPDPDKRACANDLL 263
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 114/288 (39%), Gaps = 43/288 (14%)
Query: 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNVG-----KRDFEQQMEIVGSIRHENVVE 383
+V+G G FG L+ G + +K + G +RDF + I+G H NV+
Sbjct: 39 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 98
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXX 443
L+ +++ ++ GS+ + L G+ T
Sbjct: 99 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQF-------TVIQLVGMLRGIAAGMKYL 151
Query: 444 XXXKLVHGNIKSSNIFLNSQQYGCVSDLGLT----------TITSALAPVIARAAGYRAP 493
VH ++ + NI +NS VSD GL+ T TSAL I + AP
Sbjct: 152 ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIP--IRWTAP 209
Query: 494 EVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVF 552
E RK T ASDV+S+G+V+ E+++ G+ P ++++ +
Sbjct: 210 EAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIE--------------- 254
Query: 553 DVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600
+ R P + + Q+ + C + + RPK +V ++ + N
Sbjct: 255 --QDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRN 300
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 116/297 (39%), Gaps = 37/297 (12%)
Query: 317 YAFDLEDLLRASAEVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNVG-----KRDFEQQM 370
+A ++E V+G G FG L+ G + +K + VG +RDF +
Sbjct: 15 FAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEA 74
Query: 371 EIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXX 430
I+G H N++ L+ ++V +Y GS+ L G+ T
Sbjct: 75 SIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQF-------TVIQLV 127
Query: 431 XXXXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG- 489
VH ++ + NI +NS VSD GL+ + G
Sbjct: 128 GMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 187
Query: 490 -----YRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVV 543
+ APE RK T ASDV+S+G+V+ E+++ G+ P +++ V
Sbjct: 188 KIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVE------ 241
Query: 544 REEWTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600
E R P+ + + Q+ + C + + RPK ++V +++ + N
Sbjct: 242 -----------EGYRLPSPMDCPAALYQLMLDCWQKERNSRPKFDEIVNMLDKLIRN 287
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 116/266 (43%), Gaps = 31/266 (11%)
Query: 332 LGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSK 391
LG G FG + A T V VK +K ++ F + ++ +++H+ +V+L A +K
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV-TK 248
Query: 392 DEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVHG 451
+ ++ ++ + GS+ L S+ G + PL +H
Sbjct: 249 EPIYIITEFMAKGSLLDFLKSDEG-SKQPL-----PKLIDFSAQIAEGMAFIEQRNYIHR 302
Query: 452 NIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDVYSFG 511
+++++NI +++ ++D GL + + P+ + APE + T SDV+SFG
Sbjct: 303 DLRAANILVSASLVCKIADFGLARVGAKF-PI-----KWTAPEAINFGSFTIKSDVWSFG 356
Query: 512 VVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEEEMVEML 570
++L+EI+T G+ P E++ + + + R E E E+
Sbjct: 357 ILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPE-----------------ELY 399
Query: 571 QIAMSCVVRMPDQRPKMPDVVRVIEN 596
I M C P++RP + V+++
Sbjct: 400 NIMMRCWKNRPEERPTFEYIQSVLDD 425
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 109/247 (44%), Gaps = 20/247 (8%)
Query: 329 AEVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYY 388
+V+G G+FG+ Y+A L D +V +K V KR ++++I+ + H N+V L+ ++
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 389 YSKDEKL------MVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXX 442
YS EK +V DY H R + +P+ +
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-----VKLYMYQLFRSLAY 137
Query: 443 XXXXKLVHGNIKSSNIFLNSQQYGC-VSDLGLTTITSALAPVIARAAG--YRAPE-VTDS 498
+ H +IK N+ L+ + D G P ++ YRAPE + +
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGA 197
Query: 499 RKATQASDVYSFGVVLLEILTGKSPIHT--TGGDELVHLVRWVHSVVREEWTAEVFDVEL 556
T + DV+S G VL E+L G+ PI +G D+LV +++ + + RE+ +
Sbjct: 198 TDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE 256
Query: 557 LRYPNIE 563
++P I+
Sbjct: 257 FKFPQIK 263
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 103/229 (44%), Gaps = 20/229 (8%)
Query: 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYY 389
+V+G G+FG+ Y+A L D +V +K V GK ++++I+ + H N+V L+ ++Y
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQGKAFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 390 SKDEKL------MVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXX 443
S EK +V DY H R + +P+ +
Sbjct: 84 SSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIY-----VKLYMYQLFRSLAYI 138
Query: 444 XXXKLVHGNIKSSNIFLNSQQYGC-VSDLGLTTITSALAPVIARAAG--YRAPE-VTDSR 499
+ H +IK N+ L+ + D G P ++ YRAPE + +
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGAT 198
Query: 500 KATQASDVYSFGVVLLEILTGKSPIHT--TGGDELVHLVRWVHSVVREE 546
T + DV+S G VL E+L G+ PI +G D+LV +++ + + RE+
Sbjct: 199 DYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKVLGTPTREQ 246
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 109/247 (44%), Gaps = 20/247 (8%)
Query: 329 AEVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYY 388
+V+G G+FG+ Y+A L D +V +K V KR ++++I+ + H N+V L+ ++
Sbjct: 26 TKVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFF 83
Query: 389 YSKDEKL------MVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXX 442
YS EK +V DY H R + +P+ +
Sbjct: 84 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-----VKLYMYQLFRSLAY 138
Query: 443 XXXXKLVHGNIKSSNIFLNSQQYGC-VSDLGLTTITSALAPVIARAAG--YRAPE-VTDS 498
+ H +IK N+ L+ + D G P ++ YRAPE + +
Sbjct: 139 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGA 198
Query: 499 RKATQASDVYSFGVVLLEILTGKSPIHT--TGGDELVHLVRWVHSVVREEWTAEVFDVEL 556
T + DV+S G VL E+L G+ PI +G D+LV +++ + + RE+ +
Sbjct: 199 TDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE 257
Query: 557 LRYPNIE 563
++P I+
Sbjct: 258 FKFPQIK 264
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 109/247 (44%), Gaps = 20/247 (8%)
Query: 329 AEVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYY 388
+V+G G+FG+ Y+A L D +V +K V KR ++++I+ + H N+V L+ ++
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 389 YSKDEKL------MVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXX 442
YS EK +V DY H R + +P+ +
Sbjct: 83 YSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-----VKLYMYQLFRSLAY 137
Query: 443 XXXXKLVHGNIKSSNIFLNSQQYGC-VSDLGLTTITSALAPVIARAAG--YRAPE-VTDS 498
+ H +IK N+ L+ + D G P ++ YRAPE + +
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGA 197
Query: 499 RKATQASDVYSFGVVLLEILTGKSPIHT--TGGDELVHLVRWVHSVVREEWTAEVFDVEL 556
T + DV+S G VL E+L G+ PI +G D+LV +++ + + RE+ +
Sbjct: 198 TDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE 256
Query: 557 LRYPNIE 563
++P I+
Sbjct: 257 FKFPQIK 263
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 109/247 (44%), Gaps = 20/247 (8%)
Query: 329 AEVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYY 388
+V+G G+FG+ Y+A L D +V +K V KR ++++I+ + H N+V L+ ++
Sbjct: 44 TKVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFF 101
Query: 389 YSKDEKL------MVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXX 442
YS EK +V DY H R + +P+ +
Sbjct: 102 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-----VKLYMYQLFRSLAY 156
Query: 443 XXXXKLVHGNIKSSNIFLNSQQYGC-VSDLGLTTITSALAPVIARAAG--YRAPE-VTDS 498
+ H +IK N+ L+ + D G P ++ YRAPE + +
Sbjct: 157 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGA 216
Query: 499 RKATQASDVYSFGVVLLEILTGKSPIHT--TGGDELVHLVRWVHSVVREEWTAEVFDVEL 556
T + DV+S G VL E+L G+ PI +G D+LV +++ + + RE+ +
Sbjct: 217 TDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE 275
Query: 557 LRYPNIE 563
++P I+
Sbjct: 276 FKFPQIK 282
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 109/246 (44%), Gaps = 20/246 (8%)
Query: 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYY 389
+V+G G+FG+ Y+A L D +V +K V KR ++++I+ + H N+V L+ ++Y
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 117
Query: 390 SKDEKL------MVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXX 443
S EK +V DY H R + +P+ +
Sbjct: 118 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-----VKLYMYQLFRSLAYI 172
Query: 444 XXXKLVHGNIKSSNIFLNSQQYGC-VSDLGLTTITSALAPVIARAAG--YRAPE-VTDSR 499
+ H +IK N+ L+ + D G P ++ YRAPE + +
Sbjct: 173 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGAT 232
Query: 500 KATQASDVYSFGVVLLEILTGKSPIHT--TGGDELVHLVRWVHSVVREEWTAEVFDVELL 557
T + DV+S G VL E+L G+ PI +G D+LV +++ + + RE+ +
Sbjct: 233 DYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEF 291
Query: 558 RYPNIE 563
++P I+
Sbjct: 292 KFPQIK 297
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 62/106 (58%), Gaps = 4/106 (3%)
Query: 78 FSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLK-SLCYLYLQFNNFSG-TLPDFS 135
FSG +P +T+ ++ LK+L L N +G P NL SL L L NNFSG LP+
Sbjct: 327 FSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLC 386
Query: 136 VWKNLTI--INLSDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIP 179
T+ + L +NGF G IP +LSN ++L +L+L+ N LSG IP
Sbjct: 387 QNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIP 432
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 67/121 (55%), Gaps = 6/121 (4%)
Query: 60 KCSEDGKRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCY 119
CSE +V++ L SG IP +++ LS L+ L L N++ G P + + +K+L
Sbjct: 413 NCSE----LVSLHLSFNYLSGTIP-SSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLET 467
Query: 120 LYLQFNNFSGTLPD-FSVWKNLTIINLSDNGFNGTIPRSLSNLTQLEALYLANNSLSGKI 178
L L FN+ +G +P S NL I+LS+N G IP+ + L L L L+NNS SG I
Sbjct: 468 LILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNI 527
Query: 179 P 179
P
Sbjct: 528 P 528
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 77/163 (47%), Gaps = 23/163 (14%)
Query: 86 TISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLPD-FSVWKNLTIIN 144
T ++ L + N+++GY P + ++ L L L N+ SG++PD + L I++
Sbjct: 624 TFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILD 683
Query: 145 LSDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPDXXXXXXXXXXXXXXXXSGSIPQSL 204
LS N +G IP+++S LT L + L+NN+LSG IP+
Sbjct: 684 LSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM--------------------GQF 723
Query: 205 KRFPSSAFVGNSISFDENLAPRASPDVAPRGESHLRPKSGRRI 247
+ FP + F+ N L PR P A G +H + GRR+
Sbjct: 724 ETFPPAKFLNNPGLCGYPL-PRCDPSNA-DGYAHHQRSHGRRL 764
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 84 PNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLP-DFSVWKNLTI 142
P+ +S + L +SL +N +TG P L++L L L N+FSG +P + ++L
Sbjct: 480 PSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIW 539
Query: 143 INLSDNGFNGTIPRSL 158
++L+ N FNGTIP ++
Sbjct: 540 LDLNTNLFNGTIPAAM 555
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 74/185 (40%), Gaps = 66/185 (35%)
Query: 57 TGVKCSEDGKRVVA-------VRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPS 109
+G K S D R ++ + + F G IPP L +L+ LSL N TG P
Sbjct: 228 SGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPP---LPLKSLQYLSLAENKFTGEIP- 283
Query: 110 DFIN--LKSLCYLYLQ------------------------FNNFSGTLPDFSVWK--NLT 141
DF++ +L L L NNFSG LP ++ K L
Sbjct: 284 DFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLK 343
Query: 142 IINLSDNGFNGTIPRSLSNLT---------------------------QLEALYLANNSL 174
+++LS N F+G +P SL+NL+ L+ LYL NN
Sbjct: 344 VLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGF 403
Query: 175 SGKIP 179
+GKIP
Sbjct: 404 TGKIP 408
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 48/103 (46%), Gaps = 4/103 (3%)
Query: 78 FSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLPDFSVW 137
FS IP + SAL+ L + N ++G F L L + N F G +P +
Sbjct: 209 FSTGIP--FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPL- 265
Query: 138 KNLTIINLSDNGFNGTIPRSLSNLTQ-LEALYLANNSLSGKIP 179
K+L ++L++N F G IP LS L L L+ N G +P
Sbjct: 266 KSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVP 308
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 2/112 (1%)
Query: 93 LKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLPDFSVWKNLTIINLSDNGFNG 152
LK L++ N I+G D +L +L + NNFS +P L +++S N +G
Sbjct: 177 LKHLAISGNKISGDV--DVSRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSG 234
Query: 153 TIPRSLSNLTQLEALYLANNSLSGKIPDXXXXXXXXXXXXXXXXSGSIPQSL 204
R++S T+L+ L +++N G IP +G IP L
Sbjct: 235 DFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFL 286
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 29/51 (56%)
Query: 130 TLPDFSVWKNLTIINLSDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPD 180
T P F ++ +++S N +G IP+ + ++ L L L +N +SG IPD
Sbjct: 621 TSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPD 671
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 26/55 (47%)
Query: 84 PNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLPDFSVWK 138
P+ + L L IL L SN + G P L L + L NN SG +P+ ++
Sbjct: 670 PDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFE 724
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 109/247 (44%), Gaps = 20/247 (8%)
Query: 329 AEVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYY 388
+V+G G+FG+ Y+A L D +V +K V KR ++++I+ + H N+V L+ ++
Sbjct: 29 TKVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFF 86
Query: 389 YSKDEKL------MVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXX 442
YS EK +V DY H R + +P+ +
Sbjct: 87 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-----VKLYMYQLFRSLAY 141
Query: 443 XXXXKLVHGNIKSSNIFLNSQQYGC-VSDLGLTTITSALAPVIARAAG--YRAPE-VTDS 498
+ H +IK N+ L+ + D G P ++ YRAPE + +
Sbjct: 142 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGA 201
Query: 499 RKATQASDVYSFGVVLLEILTGKSPIHT--TGGDELVHLVRWVHSVVREEWTAEVFDVEL 556
T + DV+S G VL E+L G+ PI +G D+LV +++ + + RE+ +
Sbjct: 202 TDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE 260
Query: 557 LRYPNIE 563
++P I+
Sbjct: 261 FKFPQIK 267
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 109/246 (44%), Gaps = 20/246 (8%)
Query: 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYY 389
+V+G G+FG+ Y+A L D +V +K V KR ++++I+ + H N+V L+ ++Y
Sbjct: 34 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 91
Query: 390 SKDEKL------MVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXX 443
S EK +V DY H R + +P+ +
Sbjct: 92 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-----VKLYMYQLFRSLAYI 146
Query: 444 XXXKLVHGNIKSSNIFLNSQQYGC-VSDLGLTTITSALAPVIARAAG--YRAPE-VTDSR 499
+ H +IK N+ L+ + D G P ++ YRAPE + +
Sbjct: 147 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGAT 206
Query: 500 KATQASDVYSFGVVLLEILTGKSPIHT--TGGDELVHLVRWVHSVVREEWTAEVFDVELL 557
T + DV+S G VL E+L G+ PI +G D+LV +++ + + RE+ +
Sbjct: 207 DYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEF 265
Query: 558 RYPNIE 563
++P I+
Sbjct: 266 KFPQIK 271
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 120/278 (43%), Gaps = 21/278 (7%)
Query: 299 VSRNQDASNRLFFFEGCNYAFDL-EDLLRASAEVLGKGTFGMAYKAILEDGTTVVVKRLK 357
VSR++D S D +++ +V+G G+FG+ Y+A L D +V +K
Sbjct: 32 VSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVA--IK 89
Query: 358 DVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKL------MVYDYYSLGSVSAMLH 411
V KR ++++I+ + H N+V L+ ++YS EK +V DY H
Sbjct: 90 KVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH 149
Query: 412 SERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGC-VSD 470
R + +P+ + + H +IK N+ L+ + D
Sbjct: 150 YSRAKQTLPVIY-----VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCD 204
Query: 471 LGLTTITSALAPVIARAAG--YRAPE-VTDSRKATQASDVYSFGVVLLEILTGKSPIHT- 526
G P ++ YRAPE + + T + DV+S G VL E+L G+ PI
Sbjct: 205 FGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPG 263
Query: 527 -TGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIE 563
+G D+LV +++ + + RE+ + ++P I+
Sbjct: 264 DSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK 301
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 109/247 (44%), Gaps = 20/247 (8%)
Query: 329 AEVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYY 388
+V+G G+FG+ Y+A L D +V +K V KR ++++I+ + H N+V L+ ++
Sbjct: 37 TKVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFF 94
Query: 389 YSKDEKL------MVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXX 442
YS EK +V DY H R + +P+ +
Sbjct: 95 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-----VKLYMYQLFRSLAY 149
Query: 443 XXXXKLVHGNIKSSNIFLNSQQYGC-VSDLGLTTITSALAPVIARAAG--YRAPE-VTDS 498
+ H +IK N+ L+ + D G P ++ YRAPE + +
Sbjct: 150 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGA 209
Query: 499 RKATQASDVYSFGVVLLEILTGKSPIHT--TGGDELVHLVRWVHSVVREEWTAEVFDVEL 556
T + DV+S G VL E+L G+ PI +G D+LV +++ + + RE+ +
Sbjct: 210 TDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE 268
Query: 557 LRYPNIE 563
++P I+
Sbjct: 269 FKFPQIK 275
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 112/284 (39%), Gaps = 37/284 (13%)
Query: 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNVG-----KRDFEQQMEIVGSIRHENVVE 383
+V+G G FG L+ G + +K + G +RDF + I+G H N++
Sbjct: 35 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 94
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXX 443
L+ +++ +Y GS+ A L + +GR T
Sbjct: 95 LEGVVTKCKPVMIITEYMENGSLDAFLR--KNDGRF-----TVIQLVGMLRGIGSGMKYL 147
Query: 444 XXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG------YRAPEVTD 497
VH ++ + NI +NS VSD G++ + G + APE
Sbjct: 148 SDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 207
Query: 498 SRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVEL 556
RK T ASDV+S+G+V+ E+++ G+ P +++ + E
Sbjct: 208 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIE-----------------EG 250
Query: 557 LRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600
R P + + + Q+ + C + RPK +V +++ + N
Sbjct: 251 YRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLIRN 294
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 109/247 (44%), Gaps = 20/247 (8%)
Query: 329 AEVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYY 388
+V+G G+FG+ Y+A L D +V +K V KR ++++I+ + H N+V L+ ++
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 389 YSKDEKL------MVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXX 442
YS EK +V DY H R + +P+ +
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-----VKLYMYQLFRSLAY 137
Query: 443 XXXXKLVHGNIKSSNIFLNSQQYGC-VSDLGLTTITSALAPVIARAAG--YRAPE-VTDS 498
+ H +IK N+ L+ + D G P ++ YRAPE + +
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGA 197
Query: 499 RKATQASDVYSFGVVLLEILTGKSPIHT--TGGDELVHLVRWVHSVVREEWTAEVFDVEL 556
T + DV+S G VL E+L G+ PI +G D+LV +++ + + RE+ +
Sbjct: 198 TDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE 256
Query: 557 LRYPNIE 563
++P I+
Sbjct: 257 FKFPQIK 263
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 97/216 (44%), Gaps = 27/216 (12%)
Query: 332 LGKGTFGMAYKAIL----EDGTTVVVKRLKDVNVGKRDFEQ---QMEIVGSIRHENVVEL 384
+G+G+FG KAIL EDG V+K + + ++ E+ ++ ++ +++H N+V+
Sbjct: 32 IGEGSFG---KAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQY 88
Query: 385 KAYYYSKDEKLMVYDYYSLGSVSAMLHSERG----EGRIPLDWDTXXXXXXXXXXXXXXX 440
+ + +V DY G + +++++G E +I LDW
Sbjct: 89 RESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQI-LDW---------FVQICLAL 138
Query: 441 XXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTI---TSALAPVIARAAGYRAPEVTD 497
K++H +IKS NIFL + D G+ + T LA Y +PE+ +
Sbjct: 139 KHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICE 198
Query: 498 SRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELV 533
++ SD+++ G VL E+ T K LV
Sbjct: 199 NKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLV 234
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 109/246 (44%), Gaps = 20/246 (8%)
Query: 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYY 389
+V+G G+FG+ Y+A L D +V +K V KR ++++I+ + H N+V L+ ++Y
Sbjct: 38 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 95
Query: 390 SKDEKL------MVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXX 443
S EK +V DY H R + +P+ +
Sbjct: 96 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-----VKLYMYQLFRSLAYI 150
Query: 444 XXXKLVHGNIKSSNIFLNSQQYGC-VSDLGLTTITSALAPVIARAAG--YRAPE-VTDSR 499
+ H +IK N+ L+ + D G P ++ YRAPE + +
Sbjct: 151 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGAT 210
Query: 500 KATQASDVYSFGVVLLEILTGKSPIHT--TGGDELVHLVRWVHSVVREEWTAEVFDVELL 557
T + DV+S G VL E+L G+ PI +G D+LV +++ + + RE+ +
Sbjct: 211 DYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEF 269
Query: 558 RYPNIE 563
++P I+
Sbjct: 270 KFPQIK 275
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 115/285 (40%), Gaps = 43/285 (15%)
Query: 330 EVLGKGTFGMAYKAILE----DGTTVVVKRLKD--VNVGKRDFEQQMEIVGSIRHENVVE 383
EV+G G FG + L+ + V +K LK +R+F + I+G H N++
Sbjct: 20 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIR 79
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXX 443
L+ + +++ ++ G++ + L G+ T
Sbjct: 80 LEGVVTNSMPVMILTEFMENGALDSFLRLNDGQF-------TVIQLVGMLRGIASGMRYL 132
Query: 444 XXXKLVHGNIKSSNIFLNSQQYGCVSDLGLT----------TITSALAPVIARAAGYRAP 493
VH ++ + NI +NS VSD GL+ T TS+L I + AP
Sbjct: 133 AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIP--IRWTAP 190
Query: 494 EVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVF 552
E RK T ASD +S+G+V+ E+++ G+ P ++++ +
Sbjct: 191 EAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIE--------------- 235
Query: 553 DVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
+ R P + + Q+ + C + + RP+ P VV ++ +
Sbjct: 236 --QDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 278
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 120/278 (43%), Gaps = 21/278 (7%)
Query: 299 VSRNQDASNRLFFFEGCNYAFDL-EDLLRASAEVLGKGTFGMAYKAILEDGTTVVVKRLK 357
VSR++D S D +++ +V+G G+FG+ Y+A L D +V +K
Sbjct: 73 VSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVA--IK 130
Query: 358 DVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKL------MVYDYYSLGSVSAMLH 411
V KR ++++I+ + H N+V L+ ++YS EK +V DY H
Sbjct: 131 KVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH 190
Query: 412 SERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGC-VSD 470
R + +P+ + + H +IK N+ L+ + D
Sbjct: 191 YSRAKQTLPVIY-----VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCD 245
Query: 471 LGLTTITSALAPVIARAAG--YRAPE-VTDSRKATQASDVYSFGVVLLEILTGKSPIHT- 526
G P ++ YRAPE + + T + DV+S G VL E+L G+ PI
Sbjct: 246 FGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPG 304
Query: 527 -TGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIE 563
+G D+LV +++ + + RE+ + ++P I+
Sbjct: 305 DSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK 342
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 120/278 (43%), Gaps = 21/278 (7%)
Query: 299 VSRNQDASNRLFFFEGCNYAFDL-EDLLRASAEVLGKGTFGMAYKAILEDGTTVVVKRLK 357
VSR++D S D +++ +V+G G+FG+ Y+A L D +V +K
Sbjct: 30 VSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVA--IK 87
Query: 358 DVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSKDEKL------MVYDYYSLGSVSAMLH 411
V KR ++++I+ + H N+V L+ ++YS EK +V DY H
Sbjct: 88 KVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH 147
Query: 412 SERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGC-VSD 470
R + +P+ + + H +IK N+ L+ + D
Sbjct: 148 YSRAKQTLPVIY-----VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCD 202
Query: 471 LGLTTITSALAPVIARAAG--YRAPE-VTDSRKATQASDVYSFGVVLLEILTGKSPIHT- 526
G P ++ YRAPE + + T + DV+S G VL E+L G+ PI
Sbjct: 203 FGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPG 261
Query: 527 -TGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIE 563
+G D+LV +++ + + RE+ + ++P I+
Sbjct: 262 DSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIK 299
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 113/287 (39%), Gaps = 42/287 (14%)
Query: 332 LGKGTFGMAYKAIL------EDGTTVVVKRLKDVNVGKR-DFEQQMEIVGSIRHENVVEL 384
LG+G FG + A +D V VK LKD + R DF+++ E++ +++HE++V+
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 385 KAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXX--------XXXXXXXX 436
D +MV++Y G ++ L + + I +D
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 437 XXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG------- 489
VH ++ + N + + + D G++ + R G
Sbjct: 143 ASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMS--RDVYSTDYYRVGGHTMLPIR 200
Query: 490 YRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWT 548
+ PE RK T SDV+SFGV+L EI T GK P E++ +
Sbjct: 201 WMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECIT----------- 249
Query: 549 AEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIE 595
+L P + + E+ + + C R P QR + ++ +++
Sbjct: 250 ----QGRVLERPRVCPK--EVYDVMLGCWQREPQQRLNIKEIYKILH 290
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 116/293 (39%), Gaps = 38/293 (12%)
Query: 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNVG-----KRDFEQQMEIVGSIRHENVVE 383
+V+G G FG L+ G + +K + G +RDF + I+G H N++
Sbjct: 14 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 73
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXX 443
L+ +++ +Y GS+ A L + +GR T
Sbjct: 74 LEGVVTKCKPVMIITEYMENGSLDAFLR--KNDGRF-----TVIQLVGMLRGIGSGMKYL 126
Query: 444 XXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG------YRAPEVTD 497
VH ++ + NI +NS VSD G++ + G + APE
Sbjct: 127 SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 186
Query: 498 SRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVEL 556
RK T ASDV+S+G+V+ E+++ G+ P +++ + E
Sbjct: 187 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIE-----------------EG 229
Query: 557 LRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIEN-VRPNDSENRPSS 608
R P + + + Q+ + C + RPK +V +++ +R +S R S
Sbjct: 230 YRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLIRNPNSLKRTGS 282
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 62/106 (58%), Gaps = 4/106 (3%)
Query: 78 FSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLK-SLCYLYLQFNNFSG-TLPDFS 135
FSG +P +T+ ++ LK+L L N +G P NL SL L L NNFSG LP+
Sbjct: 330 FSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLC 389
Query: 136 VWKNLTI--INLSDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIP 179
T+ + L +NGF G IP +LSN ++L +L+L+ N LSG IP
Sbjct: 390 QNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIP 435
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 67/121 (55%), Gaps = 6/121 (4%)
Query: 60 KCSEDGKRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCY 119
CSE +V++ L SG IP +++ LS L+ L L N++ G P + + +K+L
Sbjct: 416 NCSE----LVSLHLSFNYLSGTIP-SSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLET 470
Query: 120 LYLQFNNFSGTLPD-FSVWKNLTIINLSDNGFNGTIPRSLSNLTQLEALYLANNSLSGKI 178
L L FN+ +G +P S NL I+LS+N G IP+ + L L L L+NNS SG I
Sbjct: 471 LILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNI 530
Query: 179 P 179
P
Sbjct: 531 P 531
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 57/96 (59%), Gaps = 1/96 (1%)
Query: 86 TISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLPD-FSVWKNLTIIN 144
T ++ L + N+++GY P + ++ L L L N+ SG++PD + L I++
Sbjct: 627 TFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILD 686
Query: 145 LSDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPD 180
LS N +G IP+++S LT L + L+NN+LSG IP+
Sbjct: 687 LSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPE 722
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 84 PNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLP-DFSVWKNLTI 142
P+ +S + L +SL +N +TG P L++L L L N+FSG +P + ++L
Sbjct: 483 PSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIW 542
Query: 143 INLSDNGFNGTIPRSL 158
++L+ N FNGTIP ++
Sbjct: 543 LDLNTNLFNGTIPAAM 558
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 74/185 (40%), Gaps = 66/185 (35%)
Query: 57 TGVKCSEDGKRVVA-------VRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPS 109
+G K S D R ++ + + F G IPP L +L+ LSL N TG P
Sbjct: 231 SGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPP---LPLKSLQYLSLAENKFTGEIP- 286
Query: 110 DFIN--LKSLCYLYLQ------------------------FNNFSGTLPDFSVWK--NLT 141
DF++ +L L L NNFSG LP ++ K L
Sbjct: 287 DFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLK 346
Query: 142 IINLSDNGFNGTIPRSLSNLT---------------------------QLEALYLANNSL 174
+++LS N F+G +P SL+NL+ L+ LYL NN
Sbjct: 347 VLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGF 406
Query: 175 SGKIP 179
+GKIP
Sbjct: 407 TGKIP 411
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 78 FSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLPD-FSV 136
SG IP I + L IL+L N I+G P + +L+ L L L N G +P S
Sbjct: 644 LSGYIP-KEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSA 702
Query: 137 WKNLTIINLSDNGFNGTIPRSLSNLTQLEALYLANNSLSG 176
LT I+LS+N +G IP T A +L N L G
Sbjct: 703 LTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCG 742
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 48/103 (46%), Gaps = 4/103 (3%)
Query: 78 FSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLPDFSVW 137
FS IP + SAL+ L + N ++G F L L + N F G +P +
Sbjct: 212 FSTGIP--FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPL- 268
Query: 138 KNLTIINLSDNGFNGTIPRSLSNLTQ-LEALYLANNSLSGKIP 179
K+L ++L++N F G IP LS L L L+ N G +P
Sbjct: 269 KSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVP 311
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 2/112 (1%)
Query: 93 LKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLPDFSVWKNLTIINLSDNGFNG 152
LK L++ N I+G D +L +L + NNFS +P L +++S N +G
Sbjct: 180 LKHLAISGNKISGDV--DVSRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSG 237
Query: 153 TIPRSLSNLTQLEALYLANNSLSGKIPDXXXXXXXXXXXXXXXXSGSIPQSL 204
R++S T+L+ L +++N G IP +G IP L
Sbjct: 238 DFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFL 289
Score = 32.3 bits (72), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 29/51 (56%)
Query: 130 TLPDFSVWKNLTIINLSDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPD 180
T P F ++ +++S N +G IP+ + ++ L L L +N +SG IPD
Sbjct: 624 TSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPD 674
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 109/247 (44%), Gaps = 20/247 (8%)
Query: 329 AEVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYY 388
+V+G G+FG+ Y+A L D +V +K V KR ++++I+ + H N+V L+ ++
Sbjct: 38 TKVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFF 95
Query: 389 YSKDEKL------MVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXX 442
YS EK +V DY H R + +P+ +
Sbjct: 96 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-----VKLYMYQLFRSLAY 150
Query: 443 XXXXKLVHGNIKSSNIFLNSQQYGC-VSDLGLTTITSALAPVIARAAG--YRAPE-VTDS 498
+ H +IK N+ L+ + D G P ++ YRAPE + +
Sbjct: 151 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGA 210
Query: 499 RKATQASDVYSFGVVLLEILTGKSPIHT--TGGDELVHLVRWVHSVVREEWTAEVFDVEL 556
T + DV+S G VL E+L G+ PI +G D+LV +++ + + RE+ +
Sbjct: 211 TDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE 269
Query: 557 LRYPNIE 563
++P I+
Sbjct: 270 FKFPQIK 276
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 109/247 (44%), Gaps = 20/247 (8%)
Query: 329 AEVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYY 388
+V+G G+FG+ Y+A L D +V +K V KR ++++I+ + H N+V L+ ++
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 389 YSKDEKL------MVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXX 442
YS EK +V DY H R + +P+ +
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-----VKLYMYQLFRSLAY 137
Query: 443 XXXXKLVHGNIKSSNIFLNSQQYGC-VSDLGLTTITSALAPVIARAAG--YRAPE-VTDS 498
+ H +IK N+ L+ + D G P ++ YRAPE + +
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGA 197
Query: 499 RKATQASDVYSFGVVLLEILTGKSPIHT--TGGDELVHLVRWVHSVVREEWTAEVFDVEL 556
T + DV+S G VL E+L G+ PI +G D+LV +++ + + RE+ +
Sbjct: 198 TDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE 256
Query: 557 LRYPNIE 563
++P I+
Sbjct: 257 FKFPQIK 263
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 109/247 (44%), Gaps = 20/247 (8%)
Query: 329 AEVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYY 388
+V+G G+FG+ Y+A L D +V +K V GK ++++I+ + H N+V L+ ++
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVA--IKKVLQGKAFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 389 YSKDEKL------MVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXX 442
YS EK +V DY H R + +P+ +
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-----VKLYMYQLFRSLAY 137
Query: 443 XXXXKLVHGNIKSSNIFLNSQQYGC-VSDLGLTTITSALAPVIARAAG--YRAPE-VTDS 498
+ H +IK N+ L+ + D G P ++ YRAPE + +
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGA 197
Query: 499 RKATQASDVYSFGVVLLEILTGKSPIHT--TGGDELVHLVRWVHSVVREEWTAEVFDVEL 556
T + DV+S G VL E+L G+ PI +G D+LV +++ + + RE+ +
Sbjct: 198 TDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE 256
Query: 557 LRYPNIE 563
++P I+
Sbjct: 257 FKFPQIK 263
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 129/292 (44%), Gaps = 35/292 (11%)
Query: 316 NYAFDLEDLLRASAEVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFE---QQMEI 372
+Y +++E + +G G+FG YK V VK LK V+ F+ ++ +
Sbjct: 28 SYYWEIEASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAV 85
Query: 373 VGSIRHENVVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXX 432
+ RH N++ L Y +KD +V + S+ LH + + ++
Sbjct: 86 LRKTRHVNIL-LFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQM-------FQLIDI 137
Query: 433 XXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALA--PVIARAAG- 489
++H ++KS+NIFL+ + D GL T+ S + + + G
Sbjct: 138 ARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGS 197
Query: 490 --YRAPEV---TDSRKATQASDVYSFGVVLLEILTGKSPI-HTTGGDELVHLVRWVHSVV 543
+ APEV D+ + SDVYS+G+VL E++TG+ P H D+++ +V ++
Sbjct: 198 VLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASP 257
Query: 544 REEWTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIE 595
D+ L Y N + M ++ CV ++ ++RP P ++ IE
Sbjct: 258 ---------DLSKL-YKNCPKAMKRLV---ADCVKKVKEERPLFPQILSSIE 296
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 31/219 (14%)
Query: 330 EVLGKGTFGMAYKAILEDGTTVVVKRLK-----DVNVGKRDFEQQMEIVGSIRHENVVEL 384
E++G G FG Y+A G V VK + D++ + Q+ ++ ++H N++ L
Sbjct: 13 EIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIAL 71
Query: 385 KAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXX 444
+ + +V ++ G ++ +L +R I ++W
Sbjct: 72 RGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNW------AVQIARGMNYLHDEA 125
Query: 445 XXKLVHGNIKSSNIFLN--------SQQYGCVSDLGL------TTITSALAPVIARAAGY 490
++H ++KSSNI + S + ++D GL TT SA A A +
Sbjct: 126 IVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSA-----AGAYAW 180
Query: 491 RAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGG 529
APEV + ++ SDV+S+GV+L E+LTG+ P G
Sbjct: 181 MAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDG 219
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 109/246 (44%), Gaps = 20/246 (8%)
Query: 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYY 389
+V+G G+FG+ Y+A L D +V +K V KR ++++I+ + H N+V L+ ++Y
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 117
Query: 390 SKDEKL------MVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXX 443
S EK +V DY H R + +P+ +
Sbjct: 118 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-----VKLYMYQLFRSLAYI 172
Query: 444 XXXKLVHGNIKSSNIFLNSQQYGC-VSDLGLTTITSALAPVIARAAG--YRAPE-VTDSR 499
+ H +IK N+ L+ + D G P ++ YRAPE + +
Sbjct: 173 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGAT 232
Query: 500 KATQASDVYSFGVVLLEILTGKSPIHT--TGGDELVHLVRWVHSVVREEWTAEVFDVELL 557
T + DV+S G VL E+L G+ PI +G D+LV +++ + + RE+ +
Sbjct: 233 DYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEF 291
Query: 558 RYPNIE 563
++P I+
Sbjct: 292 KFPQIK 297
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 332 LGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSK 391
LG+G FG + T V +K LK N+ F Q+ +++ +RHE +V+L A S+
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 251
Query: 392 DEKLMVYDYYSLGSVSAMLHSERGEG-RIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVH 450
+ +V +Y S GS+ L E G+ R+P D VH
Sbjct: 252 EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD-------MAAQIASGMAYVERMNYVH 304
Query: 451 GNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA----GYRAPEVTDSRKATQASD 506
+++++NI + V+D GL + + A + APE + T SD
Sbjct: 305 RDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 364
Query: 507 VYSFGVVLLEILT-GKSP 523
V+SFG++L E+ T G+ P
Sbjct: 365 VWSFGILLTELTTKGRVP 382
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 112/284 (39%), Gaps = 37/284 (13%)
Query: 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNVG-----KRDFEQQMEIVGSIRHENVVE 383
+V+G G FG L+ G + +K + G +RDF + I+G H N++
Sbjct: 20 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 79
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXX 443
L+ +++ +Y GS+ A L + +GR T
Sbjct: 80 LEGVVTKCKPVMIITEYMENGSLDAFLR--KNDGRF-----TVIQLVGMLRGIGSGMKYL 132
Query: 444 XXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG------YRAPEVTD 497
VH ++ + NI +NS VSD G++ + G + APE
Sbjct: 133 SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 192
Query: 498 SRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVEL 556
RK T ASDV+S+G+V+ E+++ G+ P +++ + E
Sbjct: 193 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIE-----------------EG 235
Query: 557 LRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600
R P + + + Q+ + C + RPK +V +++ + N
Sbjct: 236 YRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLIRN 279
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 112/234 (47%), Gaps = 25/234 (10%)
Query: 327 ASAEVLGKGTFGMAYKAILEDGTTVVVKR-LKDVNVGKRDFEQQMEIVGSIRHENVVELK 385
+ +V+G G+FG+ ++A L + V +K+ L+D KR ++++I+ ++H NVV+LK
Sbjct: 43 TNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQD----KRFKNRELQIMRIVKHPNVVDLK 98
Query: 386 AYYYS----KDEKL--MVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXX 439
A++YS KDE +V +Y A H + + +P+
Sbjct: 99 AFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPM-----LLIKLYMYQLLRS 153
Query: 440 XXXXXXXKLVHGNIKSSNIFLNSQQYGCVS--DLGLTTITSALAPVIARAAG--YRAPE- 494
+ H +IK N+ L+ G + D G I A P ++ YRAPE
Sbjct: 154 LAYIHSIGICHRDIKPQNLLLDPPS-GVLKLIDFGSAKILIAGEPNVSXICSRYYRAPEL 212
Query: 495 VTDSRKATQASDVYSFGVVLLEILTGKSPIH--TTGGDELVHLVRWVHSVVREE 546
+ + T D++S G V+ E++ G+ P+ +G D+LV +++ + + RE+
Sbjct: 213 IFGATNYTTNIDIWSTGCVMAELMQGQ-PLFPGESGIDQLVEIIKVLGTPSREQ 265
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 109/246 (44%), Gaps = 20/246 (8%)
Query: 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYY 389
+V+G G+FG+ Y+A L D +V +K V KR ++++I+ + H N+V L+ ++Y
Sbjct: 31 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 88
Query: 390 SKDEKL------MVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXX 443
S EK +V DY H R + +P+ +
Sbjct: 89 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-----VKLYMYQLFRSLAYI 143
Query: 444 XXXKLVHGNIKSSNIFLNSQQYGC-VSDLGLTTITSALAPVIARAAG--YRAPE-VTDSR 499
+ H +IK N+ L+ + D G P ++ YRAPE + +
Sbjct: 144 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGAT 203
Query: 500 KATQASDVYSFGVVLLEILTGKSPIHT--TGGDELVHLVRWVHSVVREEWTAEVFDVELL 557
T + DV+S G VL E+L G+ PI +G D+LV +++ + + RE+ +
Sbjct: 204 DYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEF 262
Query: 558 RYPNIE 563
++P I+
Sbjct: 263 KFPQIK 268
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 109/246 (44%), Gaps = 20/246 (8%)
Query: 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYY 389
+V+G G+FG+ Y+A L D +V +K V KR ++++I+ + H N+V L+ ++Y
Sbjct: 54 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFY 111
Query: 390 SKDEKL------MVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXX 443
S EK +V DY H R + +P+ +
Sbjct: 112 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-----VKLYMYQLFRSLAYI 166
Query: 444 XXXKLVHGNIKSSNIFLNSQQYGC-VSDLGLTTITSALAPVIARAAG--YRAPE-VTDSR 499
+ H +IK N+ L+ + D G P ++ YRAPE + +
Sbjct: 167 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGAT 226
Query: 500 KATQASDVYSFGVVLLEILTGKSPIHT--TGGDELVHLVRWVHSVVREEWTAEVFDVELL 557
T + DV+S G VL E+L G+ PI +G D+LV +++ + + RE+ +
Sbjct: 227 DYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEF 285
Query: 558 RYPNIE 563
++P I+
Sbjct: 286 KFPQIK 291
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 332 LGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSK 391
LG+G FG + T V +K LK + F Q+ +++ +RHE +V+L A S+
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 74
Query: 392 DEKLMVYDYYSLGSVSAMLHSERGEG-RIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVH 450
+ +V +Y S GS+ L E G+ R+P D VH
Sbjct: 75 EPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM-------AAQIASGMAYVERMNYVH 127
Query: 451 GNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA----GYRAPEVTDSRKATQASD 506
+++++NI + V+D GL + + A + APE + T SD
Sbjct: 128 RDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSD 187
Query: 507 VYSFGVVLLEILT-GKSP 523
V+SFG++L E+ T G+ P
Sbjct: 188 VWSFGILLTELTTKGRVP 205
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 332 LGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSK 391
LG+G FG + T V +K LK + F Q+ +++ IRHE +V+L A S+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQLYA-VVSE 84
Query: 392 DEKLMVYDYYSLGSVSAMLHSERGEG-RIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVH 450
+ +V +Y S GS+ L E G+ R+P D VH
Sbjct: 85 EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM-------AAQIASGMAYVERMNYVH 137
Query: 451 GNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA----GYRAPEVTDSRKATQASD 506
+++++NI + V+D GL + + A + APE + T SD
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 507 VYSFGVVLLEILT-GKSP 523
V+SFG++L E+ T G+ P
Sbjct: 198 VWSFGILLTELTTKGRVP 215
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 111/287 (38%), Gaps = 43/287 (14%)
Query: 330 EVLGKGTFGMAYKAILE----DGTTVVVKRLKDVNVG-----KRDFEQQMEIVGSIRHEN 380
+V+G G FG L+ +V +K LK VG +RDF + I+G H N
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK---VGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 381 VVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXX 440
++ L+ ++V +Y GS+ + L + T
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF-------TVIQLVGMLRGIASGM 160
Query: 441 XXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG------YRAPE 494
VH ++ + NI +NS VSD GL+ + G + +PE
Sbjct: 161 KYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 495 VTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFD 553
RK T ASDV+S+G+VL E+++ G+ P +++ V
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD---------------- 264
Query: 554 VELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600
E R P + + Q+ + C + + RPK +V +++ + N
Sbjct: 265 -EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 114/270 (42%), Gaps = 29/270 (10%)
Query: 332 LGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSK 391
LG G FG + A T V VK +K ++ F + ++ +++H+ +V+L A +K
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV-TK 81
Query: 392 DEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVHG 451
+ ++ ++ + GS+ L S+ G + PL +H
Sbjct: 82 EPIYIITEFMAKGSLLDFLKSDEG-SKQPLP-----KLIDFSAQIAEGMAFIEQRNYIHR 135
Query: 452 NIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGY----RAPEVTDSRKATQASDV 507
+++++NI +++ ++D GL + A + APE + T SDV
Sbjct: 136 DLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDV 195
Query: 508 YSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEEEM 566
+SFG++L+EI+T G+ P E++ + + + R E E
Sbjct: 196 WSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPE---------------- 239
Query: 567 VEMLQIAMSCVVRMPDQRPKMPDVVRVIEN 596
E+ I M C P++RP + V+++
Sbjct: 240 -ELYNIMMRCWKNRPEERPTFEYIQSVLDD 268
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 113/288 (39%), Gaps = 43/288 (14%)
Query: 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNVG-----KRDFEQQMEIVGSIRHENVVE 383
+V+G G FG L+ G + +K + G +RDF + I+G H NV+
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 72
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXX 443
L+ +++ ++ GS+ + L G+ T
Sbjct: 73 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQF-------TVIQLVGMLRGIAAGMKYL 125
Query: 444 XXXKLVHGNIKSSNIFLNSQQYGCVSDLGLT----------TITSALAPVIARAAGYRAP 493
VH + + NI +NS VSD GL+ T TSAL I + AP
Sbjct: 126 ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIP--IRWTAP 183
Query: 494 EVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVF 552
E RK T ASDV+S+G+V+ E+++ G+ P ++++ +
Sbjct: 184 EAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIE--------------- 228
Query: 553 DVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600
+ R P + + Q+ + C + + RPK +V ++ + N
Sbjct: 229 --QDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRN 274
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 103/229 (44%), Gaps = 20/229 (8%)
Query: 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYY 389
+V+G G+FG+ Y+A L D +V +K V GK ++++I+ + H N+V L+ ++Y
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVA--IKKVLQGKAFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 390 SKDEKL------MVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXX 443
S EK +V DY H R + +P+ +
Sbjct: 84 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-----VKLYMYQLFRSLAYI 138
Query: 444 XXXKLVHGNIKSSNIFLNSQQYGC-VSDLGLTTITSALAPVIARAAG--YRAPE-VTDSR 499
+ H +IK N+ L+ + D G P ++ YRAPE + +
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGAT 198
Query: 500 KATQASDVYSFGVVLLEILTGKSPIHT--TGGDELVHLVRWVHSVVREE 546
T + DV+S G VL E+L G+ PI +G D+LV +++ + + RE+
Sbjct: 199 DYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKVLGTPTREQ 246
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 332 LGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSK 391
LG+G FG + T V +K LK + F Q+ +++ +RHE +V+L A S+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 84
Query: 392 DEKLMVYDYYSLGSVSAMLHSERGEG-RIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVH 450
+ +V +Y S GS+ L E G+ R+P D VH
Sbjct: 85 EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDM-------AAQIASGMAYVERMNYVH 137
Query: 451 GNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA----GYRAPEVTDSRKATQASD 506
+++++NI + V+D GL + + A + APE + T SD
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 507 VYSFGVVLLEILT-GKSP 523
V+SFG++L E+ T G+ P
Sbjct: 198 VWSFGILLTELTTKGRVP 215
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 118/297 (39%), Gaps = 48/297 (16%)
Query: 332 LGKGTFGMAYKAILEDGTTVV-VKRLKDVNVGKRDFEQQM----EIVGSIRHENVVELKA 386
LGKG FG Y A + ++ +K L + K E Q+ EI +RH N++ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLH--SERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXX 444
Y++ ++ +Y LG+V L S+ E R
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT----------ATYITELANALSYCH 128
Query: 445 XXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA-----GYRAPEVTDSR 499
+++H +IK N+ L S ++D G S AP RAA Y PE+ + R
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRAALCGTLDYLPPEMIEGR 184
Query: 500 KATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRY 559
+ D++S GV+ E L GK P E + R E+T F E R
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR- 237
Query: 560 PNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR----VIENVRPNDSENRPSSGNKS 612
+++ L + P QRP + +V+ + +P++ +N+ S+ +S
Sbjct: 238 -----DLISRL------LKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESASKQS 283
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 332 LGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSK 391
LG+G FG + T V +K LK + F Q+ +++ +RHE +V+L A S+
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 73
Query: 392 DEKLMVYDYYSLGSVSAMLHSERGEG-RIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVH 450
+ +V +Y S GS+ L E G+ R+P D VH
Sbjct: 74 EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM-------AAQIASGMAYVERMNYVH 126
Query: 451 GNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA----GYRAPEVTDSRKATQASD 506
+++++NI + V+D GL + + A + APE + T SD
Sbjct: 127 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 186
Query: 507 VYSFGVVLLEILT-GKSP 523
V+SFG++L E+ T G+ P
Sbjct: 187 VWSFGILLTELTTKGRVP 204
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 115/285 (40%), Gaps = 43/285 (15%)
Query: 330 EVLGKGTFGMAYKAILE----DGTTVVVKRLKD--VNVGKRDFEQQMEIVGSIRHENVVE 383
EV+G G FG + L+ + V +K LK +R+F + I+G H N++
Sbjct: 22 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIR 81
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXX 443
L+ + +++ ++ G++ + L G+ T
Sbjct: 82 LEGVVTNSMPVMILTEFMENGALDSFLRLNDGQF-------TVIQLVGMLRGIASGMRYL 134
Query: 444 XXXKLVHGNIKSSNIFLNSQQYGCVSDLGLT----------TITSALAPVIARAAGYRAP 493
VH ++ + NI +NS VSD GL+ T TS+L I + AP
Sbjct: 135 AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIP--IRWTAP 192
Query: 494 EVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVF 552
E RK T ASD +S+G+V+ E+++ G+ P ++++ +
Sbjct: 193 EAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIE--------------- 237
Query: 553 DVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
+ R P + + Q+ + C + + RP+ P VV ++ +
Sbjct: 238 --QDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 280
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 332 LGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSK 391
LG+G FG + T V +K LK + F Q+ +++ +RHE +V+L A S+
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 75
Query: 392 DEKLMVYDYYSLGSVSAMLHSERGEG-RIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVH 450
+ +V +Y S GS+ L E G+ R+P D VH
Sbjct: 76 EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM-------AAQIASGMAYVERMNYVH 128
Query: 451 GNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA----GYRAPEVTDSRKATQASD 506
+++++NI + V+D GL + + A + APE + T SD
Sbjct: 129 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 188
Query: 507 VYSFGVVLLEILT-GKSP 523
V+SFG++L E+ T G+ P
Sbjct: 189 VWSFGILLTELTTKGRVP 206
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 332 LGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSK 391
LG+G FG + T V +K LK + F Q+ +++ +RHE +V+L A S+
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 77
Query: 392 DEKLMVYDYYSLGSVSAMLHSERGEG-RIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVH 450
+ +V +Y S GS+ L E G+ R+P D VH
Sbjct: 78 EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM-------AAQIASGMAYVERMNYVH 130
Query: 451 GNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA----GYRAPEVTDSRKATQASD 506
+++++NI + V+D GL + + A + APE + T SD
Sbjct: 131 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 190
Query: 507 VYSFGVVLLEILT-GKSP 523
V+SFG++L E+ T G+ P
Sbjct: 191 VWSFGILLTELTTKGRVP 208
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 111/287 (38%), Gaps = 43/287 (14%)
Query: 330 EVLGKGTFGMAYKAILE----DGTTVVVKRLKDVNVG-----KRDFEQQMEIVGSIRHEN 380
+V+G G FG L+ +V +K LK VG +RDF + I+G H N
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK---VGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 381 VVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXX 440
++ L+ ++V +Y GS+ + L + T
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF-------TVIQLVGMLRGIASGM 160
Query: 441 XXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG------YRAPE 494
VH ++ + NI +NS VSD GL+ + G + +PE
Sbjct: 161 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 495 VTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFD 553
RK T ASDV+S+G+VL E+++ G+ P +++ V
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD---------------- 264
Query: 554 VELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600
E R P + + Q+ + C + + RPK +V +++ + N
Sbjct: 265 -EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 332 LGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSK 391
LG+G FG + T V +K LK + F Q+ +++ +RHE +V+L A S+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 84
Query: 392 DEKLMVYDYYSLGSVSAMLHSERGEG-RIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVH 450
+ +V +Y S GS+ L E G+ R+P D VH
Sbjct: 85 EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDM-------AAQIASGMAYVERMNYVH 137
Query: 451 GNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA----GYRAPEVTDSRKATQASD 506
+++++NI + V+D GL + + A + APE + T SD
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 507 VYSFGVVLLEILT-GKSP 523
V+SFG++L E+ T G+ P
Sbjct: 198 VWSFGILLTELTTKGRVP 215
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 332 LGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSK 391
LG+G FG + T V +K LK + F Q+ +++ +RHE +V+L A S+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 84
Query: 392 DEKLMVYDYYSLGSVSAMLHSERGEG-RIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVH 450
+ +V +Y S GS+ L E G+ R+P D VH
Sbjct: 85 EPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDM-------AAQIASGMAYVERMNYVH 137
Query: 451 GNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA----GYRAPEVTDSRKATQASD 506
+++++NI + V+D GL + + A + APE + T SD
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 507 VYSFGVVLLEILT-GKSP 523
V+SFG++L E+ T G+ P
Sbjct: 198 VWSFGILLTELTTKGRVP 215
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 332 LGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSK 391
LG+G FG + T V +K LK + F Q+ +++ +RHE +V+L A S+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 84
Query: 392 DEKLMVYDYYSLGSVSAMLHSERGEG-RIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVH 450
+ +V +Y S GS+ L E G+ R+P D VH
Sbjct: 85 EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM-------AAQIASGMAYVERMNYVH 137
Query: 451 GNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA----GYRAPEVTDSRKATQASD 506
+++++NI + V+D GL + + A + APE + T SD
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 507 VYSFGVVLLEILT-GKSP 523
V+SFG++L E+ T G+ P
Sbjct: 198 VWSFGILLTELTTKGRVP 215
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 111/287 (38%), Gaps = 43/287 (14%)
Query: 330 EVLGKGTFGMAYKAILE----DGTTVVVKRLKDVNVG-----KRDFEQQMEIVGSIRHEN 380
+V+G G FG L+ +V +K LK VG +RDF + I+G H N
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK---VGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 381 VVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXX 440
++ L+ ++V +Y GS+ + L + T
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF-------TVIQLVGMLRGIASGM 160
Query: 441 XXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG------YRAPE 494
VH ++ + NI +NS VSD GL+ + G + +PE
Sbjct: 161 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 495 VTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFD 553
RK T ASDV+S+G+VL E+++ G+ P +++ V
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD---------------- 264
Query: 554 VELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600
E R P + + Q+ + C + + RPK +V +++ + N
Sbjct: 265 -EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 111/287 (38%), Gaps = 43/287 (14%)
Query: 330 EVLGKGTFGMAYKAILE----DGTTVVVKRLKDVNVG-----KRDFEQQMEIVGSIRHEN 380
+V+G G FG L+ +V +K LK VG +RDF + I+G H N
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK---VGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 381 VVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXX 440
++ L+ ++V +Y GS+ + L + T
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF-------TVIQLVGMLRGIASGM 160
Query: 441 XXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG------YRAPE 494
VH ++ + NI +NS VSD GL+ + G + +PE
Sbjct: 161 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 495 VTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFD 553
RK T ASDV+S+G+VL E+++ G+ P +++ V
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD---------------- 264
Query: 554 VELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600
E R P + + Q+ + C + + RPK +V +++ + N
Sbjct: 265 -EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 114/270 (42%), Gaps = 29/270 (10%)
Query: 332 LGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSK 391
LG G FG + A T V VK +K ++ F + ++ +++H+ +V+L A +K
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV-TK 254
Query: 392 DEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVHG 451
+ ++ ++ + GS+ L S+ G + PL +H
Sbjct: 255 EPIYIITEFMAKGSLLDFLKSDEG-SKQPL-----PKLIDFSAQIAEGMAFIEQRNYIHR 308
Query: 452 NIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGY----RAPEVTDSRKATQASDV 507
+++++NI +++ ++D GL + A + APE + T SDV
Sbjct: 309 DLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDV 368
Query: 508 YSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEEEM 566
+SFG++L+EI+T G+ P E++ + + + R E E
Sbjct: 369 WSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPE---------------- 412
Query: 567 VEMLQIAMSCVVRMPDQRPKMPDVVRVIEN 596
E+ I M C P++RP + V+++
Sbjct: 413 -ELYNIMMRCWKNRPEERPTFEYIQSVLDD 441
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 118/293 (40%), Gaps = 40/293 (13%)
Query: 332 LGKGTFGMAYKAILEDGTTVV-VKRLKDVNVGKRDFEQQM----EIVGSIRHENVVELKA 386
LGKG FG Y A + ++ +K L + K E Q+ EI +RH N++ L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLH--SERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXX 444
Y++ ++ +Y LG+V L S+ E R
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT----------ATYITELANALSYCH 126
Query: 445 XXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTIT-SALAPVIARAAGYRAPEVTDSRKATQ 503
+++H +IK N+ L S ++D G + S+ ++ Y PE+ + R +
Sbjct: 127 SKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSGTLDYLPPEMIEGRMHDE 186
Query: 504 ASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIE 563
D++S GV+ E L GK P E + R E+T F E R
Sbjct: 187 KVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR----- 235
Query: 564 EEMVEMLQIAMSCVVRMPDQRPKMPDVVR----VIENVRPNDSENRPSSGNKS 612
+++ L + P QRP + +V+ + +P++S+N+ S+ +S
Sbjct: 236 -DLISRL------LKHNPSQRPMLREVLEHPWITANSSKPSNSQNKESASKQS 281
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 111/287 (38%), Gaps = 43/287 (14%)
Query: 330 EVLGKGTFGMAYKAILE----DGTTVVVKRLKDVNVG-----KRDFEQQMEIVGSIRHEN 380
+V+G G FG L+ +V +K LK VG +RDF + I+G H N
Sbjct: 49 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK---VGYTEKQRRDFLGEASIMGQFDHPN 105
Query: 381 VVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXX 440
++ L+ ++V +Y GS+ + L + T
Sbjct: 106 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF-------TVIQLVGMLRGIASGM 158
Query: 441 XXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG------YRAPE 494
VH ++ + NI +NS VSD GL+ + G + +PE
Sbjct: 159 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 218
Query: 495 VTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFD 553
RK T ASDV+S+G+VL E+++ G+ P +++ V
Sbjct: 219 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD---------------- 262
Query: 554 VELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600
E R P + + Q+ + C + + RPK +V +++ + N
Sbjct: 263 -EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 308
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 111/287 (38%), Gaps = 43/287 (14%)
Query: 330 EVLGKGTFGMAYKAILE----DGTTVVVKRLKDVNVG-----KRDFEQQMEIVGSIRHEN 380
+V+G G FG L+ +V +K LK VG +RDF + I+G H N
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK---VGYTEKQRRDFLGEASIMGQFDHPN 78
Query: 381 VVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXX 440
++ L+ ++V +Y GS+ + L + T
Sbjct: 79 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF-------TVIQLVGMLRGIASGM 131
Query: 441 XXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG------YRAPE 494
VH ++ + NI +NS VSD GL+ + G + +PE
Sbjct: 132 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 191
Query: 495 VTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFD 553
RK T ASDV+S+G+VL E+++ G+ P +++ V
Sbjct: 192 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD---------------- 235
Query: 554 VELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600
E R P + + Q+ + C + + RPK +V +++ + N
Sbjct: 236 -EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 281
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 111/287 (38%), Gaps = 43/287 (14%)
Query: 330 EVLGKGTFGMAYKAILE----DGTTVVVKRLKDVNVG-----KRDFEQQMEIVGSIRHEN 380
+V+G G FG L+ +V +K LK VG +RDF + I+G H N
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK---VGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 381 VVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXX 440
++ L+ ++V +Y GS+ + L + T
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF-------TVIQLVGMLRGIASGM 160
Query: 441 XXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG------YRAPE 494
VH ++ + NI +NS VSD GL+ + G + +PE
Sbjct: 161 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 495 VTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFD 553
RK T ASDV+S+G+VL E+++ G+ P +++ V
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD---------------- 264
Query: 554 VELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600
E R P + + Q+ + C + + RPK +V +++ + N
Sbjct: 265 -EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 111/287 (38%), Gaps = 43/287 (14%)
Query: 330 EVLGKGTFGMAYKAILE----DGTTVVVKRLKDVNVG-----KRDFEQQMEIVGSIRHEN 380
+V+G G FG L+ +V +K LK VG +RDF + I+G H N
Sbjct: 39 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK---VGYTEKQRRDFLGEASIMGQFDHPN 95
Query: 381 VVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXX 440
++ L+ ++V +Y GS+ + L + T
Sbjct: 96 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF-------TVIQLVGMLRGIASGM 148
Query: 441 XXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG------YRAPE 494
VH ++ + NI +NS VSD GL+ + G + +PE
Sbjct: 149 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 208
Query: 495 VTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFD 553
RK T ASDV+S+G+VL E+++ G+ P +++ V
Sbjct: 209 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD---------------- 252
Query: 554 VELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600
E R P + + Q+ + C + + RPK +V +++ + N
Sbjct: 253 -EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 298
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 110/287 (38%), Gaps = 43/287 (14%)
Query: 330 EVLGKGTFGMAYKAILE----DGTTVVVKRLKDVNVG-----KRDFEQQMEIVGSIRHEN 380
+V+G G FG L+ +V +K LK VG +RDF + I+G H N
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK---VGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 381 VVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXX 440
++ L+ ++V +Y GS+ + L + T
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF-------TVIQLVGMLRGIASGM 160
Query: 441 XXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG------YRAPE 494
VH ++ + NI +NS VSD GL + G + +PE
Sbjct: 161 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 495 VTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFD 553
RK T ASDV+S+G+VL E+++ G+ P +++ V
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD---------------- 264
Query: 554 VELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600
E R P + + Q+ + C + + RPK +V +++ + N
Sbjct: 265 -EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 332 LGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSK 391
LG+G FG + T V +K LK + F Q+ +++ +RHE +V+L A S+
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 250
Query: 392 DEKLMVYDYYSLGSVSAMLHSERGEG-RIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVH 450
+ +V +Y S GS+ L E G+ R+P D VH
Sbjct: 251 EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD-------MAAQIASGMAYVERMNYVH 303
Query: 451 GNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA----GYRAPEVTDSRKATQASD 506
+++++NI + V+D GL + + A + APE + T SD
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 363
Query: 507 VYSFGVVLLEILT-GKSP 523
V+SFG++L E+ T G+ P
Sbjct: 364 VWSFGILLTELTTKGRVP 381
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 332 LGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSK 391
LG+G FG + T V +K LK + F Q+ +++ +RHE +V+L A S+
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 250
Query: 392 DEKLMVYDYYSLGSVSAMLHSERGEG-RIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVH 450
+ +V +Y S GS+ L E G+ R+P D VH
Sbjct: 251 EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD-------MAAQIASGMAYVERMNYVH 303
Query: 451 GNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGY----RAPEVTDSRKATQASD 506
+++++NI + V+D GL + + A + APE + T SD
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 363
Query: 507 VYSFGVVLLEILT-GKSP 523
V+SFG++L E+ T G+ P
Sbjct: 364 VWSFGILLTELTTKGRVP 381
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 332 LGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSK 391
LG+G FG + T V +K LK + F Q+ +++ +RHE +V+L A S+
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 333
Query: 392 DEKLMVYDYYSLGSVSAMLHSERGEG-RIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVH 450
+ +V +Y S GS+ L E G+ R+P D VH
Sbjct: 334 EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD-------MAAQIASGMAYVERMNYVH 386
Query: 451 GNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGY----RAPEVTDSRKATQASD 506
+++++NI + V+D GL + + A + APE + T SD
Sbjct: 387 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 446
Query: 507 VYSFGVVLLEILT-GKSP 523
V+SFG++L E+ T G+ P
Sbjct: 447 VWSFGILLTELTTKGRVP 464
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 85/205 (41%), Gaps = 26/205 (12%)
Query: 332 LGKGTFGMAYKAILEDGTTVV-VKRLKDVNVGKRDFEQQM----EIVGSIRHENVVELKA 386
LGKG FG Y A ++ ++ +K L + K E Q+ EI +RH N++ L
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLH--SERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXX 444
Y++ ++ +Y LG+V L S+ E R
Sbjct: 76 YFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRT----------ATYITELANALSYCH 125
Query: 445 XXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA-----GYRAPEVTDSR 499
K++H +IK N+ L S ++D G S AP RAA Y PE+ + R
Sbjct: 126 SKKVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRAALCGTLDYLPPEMIEGR 181
Query: 500 KATQASDVYSFGVVLLEILTGKSPI 524
+ D++S GV+ E L GK P
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 110/287 (38%), Gaps = 43/287 (14%)
Query: 330 EVLGKGTFGMAYKAILE----DGTTVVVKRLKDVNVG-----KRDFEQQMEIVGSIRHEN 380
+V+G G FG L+ +V +K LK VG +RDF + I+G H N
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK---VGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 381 VVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXX 440
++ L+ ++V +Y GS+ + L + T
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQF-------TVIQLVGMLRGIASGM 160
Query: 441 XXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG------YRAPE 494
VH ++ + NI +NS VSD GL + G + +PE
Sbjct: 161 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 495 VTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFD 553
RK T ASDV+S+G+VL E+++ G+ P +++ V
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD---------------- 264
Query: 554 VELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600
E R P + + Q+ + C + + RPK +V +++ + N
Sbjct: 265 -EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 332 LGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSK 391
LG+G FG + T V +K LK + F Q+ +++ +RHE +V+L A S+
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 81
Query: 392 DEKLMVYDYYSLGSVSAMLHSERGEG-RIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVH 450
+ +V +Y + GS+ L E G+ R+P D VH
Sbjct: 82 EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDM-------SAQIASGMAYVERMNYVH 134
Query: 451 GNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA----GYRAPEVTDSRKATQASD 506
+++++NI + V+D GL + + A + APE + T SD
Sbjct: 135 RDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSD 194
Query: 507 VYSFGVVLLEILT-GKSP 523
V+SFG++L E+ T G+ P
Sbjct: 195 VWSFGILLTELTTKGRVP 212
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 332 LGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSK 391
LG+G FG + T V +K LK + F Q+ +++ +RHE +V+L A S+
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 250
Query: 392 DEKLMVYDYYSLGSVSAMLHSERGEG-RIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVH 450
+ +V +Y S GS+ L E G+ R+P D VH
Sbjct: 251 EPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVD-------MAAQIASGMAYVERMNYVH 303
Query: 451 GNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA----GYRAPEVTDSRKATQASD 506
+++++NI + V+D GL + + A + APE + T SD
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 363
Query: 507 VYSFGVVLLEILT-GKSP 523
V+SFG++L E+ T G+ P
Sbjct: 364 VWSFGILLTELTTKGRVP 381
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 87/198 (43%), Gaps = 14/198 (7%)
Query: 332 LGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSK 391
LG+G FG + T V +K LK + F Q+ +++ +RHE +V+L A S+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 84
Query: 392 DEKLMVYDYYSLGSVSAMLHSERGEG-RIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVH 450
+ +V +Y S G + L E G+ R+P D VH
Sbjct: 85 EPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDM-------AAQIASGMAYVERMNYVH 137
Query: 451 GNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA----GYRAPEVTDSRKATQASD 506
+++++NI + V+D GL + + A + APE + T SD
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 507 VYSFGVVLLEILT-GKSP 523
V+SFG++L E+ T G+ P
Sbjct: 198 VWSFGILLTELTTKGRVP 215
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 87/198 (43%), Gaps = 14/198 (7%)
Query: 332 LGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSK 391
LG+G FG + T V +K LK + F Q+ +++ +RHE +V+L A S+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 84
Query: 392 DEKLMVYDYYSLGSVSAMLHSERGEG-RIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVH 450
+ +V +Y S GS+ L E G+ R+P D VH
Sbjct: 85 EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM-------AAQIASGMAYVERMNYVH 137
Query: 451 GNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA----GYRAPEVTDSRKATQASD 506
++ ++NI + V+D GL + + A + APE + T SD
Sbjct: 138 RDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 507 VYSFGVVLLEILT-GKSP 523
V+SFG++L E+ T G+ P
Sbjct: 198 VWSFGILLTELTTKGRVP 215
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 332 LGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSK 391
LG+G FG + T V +K LK + F Q+ +++ +RHE +V+L A S+
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 81
Query: 392 DEKLMVYDYYSLGSVSAMLHSERGEG-RIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVH 450
+ +V +Y + GS+ L E G+ R+P D VH
Sbjct: 82 EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDM-------SAQIASGMAYVERMNYVH 134
Query: 451 GNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA----GYRAPEVTDSRKATQASD 506
+++++NI + V+D GL + + A + APE + T SD
Sbjct: 135 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 194
Query: 507 VYSFGVVLLEILT-GKSP 523
V+SFG++L E+ T G+ P
Sbjct: 195 VWSFGILLTELTTKGRVP 212
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 87/198 (43%), Gaps = 14/198 (7%)
Query: 332 LGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSK 391
LG+G FG + T V +K LK + F Q+ +++ +RHE +V+L A S+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 84
Query: 392 DEKLMVYDYYSLGSVSAMLHSERGEG-RIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVH 450
+ +V +Y S G + L E G+ R+P D VH
Sbjct: 85 EPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDM-------AAQIASGMAYVERMNYVH 137
Query: 451 GNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA----GYRAPEVTDSRKATQASD 506
+++++NI + V+D GL + + A + APE + T SD
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 507 VYSFGVVLLEILT-GKSP 523
V+SFG++L E+ T G+ P
Sbjct: 198 VWSFGILLTELTTKGRVP 215
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 113/291 (38%), Gaps = 42/291 (14%)
Query: 332 LGKGTFGMAYKAIL--------EDGTTVVVKRLKDVNVGK--RDFEQQMEIVGSI-RHEN 380
LG+G FG A ++ TV VK LKD K D +ME++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 381 VVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEG--------RIPLDWDTXXXXXXX 432
++ L ++ +Y S G++ L + R G R+P + T
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 433 XXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG--- 489
K +H ++ + N+ + ++D GL + + G
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLP 222
Query: 490 --YRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREE 546
+ APE R T SDV+SFGV++ EI T G SP +EL L++ H + +
Sbjct: 223 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP- 281
Query: 547 WTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
N E+ M++ C +P QRP +V ++ +
Sbjct: 282 -------------ANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 116/293 (39%), Gaps = 40/293 (13%)
Query: 332 LGKGTFGMAYKAILEDGTTVV-VKRLKDVNVGKRDFEQQM----EIVGSIRHENVVELKA 386
LGKG FG Y A + ++ +K L + K E Q+ EI +RH N++ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLH--SERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXX 444
Y++ ++ +Y LG+V L S+ E R
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT----------ATYITELANALSYCH 125
Query: 445 XXKLVHGNIKSSNIFLNSQQYGCVSDLGLTT-ITSALAPVIARAAGYRAPEVTDSRKATQ 503
+++H +IK N+ L S ++D G + S+ + Y PE+ + R +
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE 185
Query: 504 ASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIE 563
D++S GV+ E L GK P E + R E+T F E R
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR----- 234
Query: 564 EEMVEMLQIAMSCVVRMPDQRPKMPDVVR----VIENVRPNDSENRPSSGNKS 612
+++ L + P QRP + +V+ + +P++ +N+ S+ +S
Sbjct: 235 -DLISRL------LKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESASKQS 280
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 113/291 (38%), Gaps = 42/291 (14%)
Query: 332 LGKGTFGMAYKAIL--------EDGTTVVVKRLKDVNVGK--RDFEQQMEIVGSI-RHEN 380
LG+G FG A ++ TV VK LKD K D +ME++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 381 VVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEG--------RIPLDWDTXXXXXXX 432
++ L ++ +Y S G++ L + R G R+P + T
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 433 XXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG--- 489
K +H ++ + N+ + ++D GL + + G
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLP 222
Query: 490 --YRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREE 546
+ APE R T SDV+SFGV++ EI T G SP +EL L++ H + +
Sbjct: 223 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP- 281
Query: 547 WTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
N E+ M++ C +P QRP +V ++ +
Sbjct: 282 -------------ANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 116/293 (39%), Gaps = 40/293 (13%)
Query: 332 LGKGTFGMAYKAILEDGTTVV-VKRLKDVNVGKRDFEQQM----EIVGSIRHENVVELKA 386
LGKG FG Y A + ++ +K L + K E Q+ EI +RH N++ L
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLH--SERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXX 444
Y++ ++ +Y LG+V L S+ E R
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT----------ATYITELANALSYCH 151
Query: 445 XXKLVHGNIKSSNIFLNSQQYGCVSDLGLTT-ITSALAPVIARAAGYRAPEVTDSRKATQ 503
+++H +IK N+ L S ++D G + S+ + Y PE+ + R +
Sbjct: 152 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE 211
Query: 504 ASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIE 563
D++S GV+ E L GK P E + R E+T F E R
Sbjct: 212 KVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR----- 260
Query: 564 EEMVEMLQIAMSCVVRMPDQRPKMPDVVR----VIENVRPNDSENRPSSGNKS 612
+++ L + P QRP + +V+ + +P++ +N+ S+ +S
Sbjct: 261 -DLISRL------LKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESASKQS 306
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 116/293 (39%), Gaps = 40/293 (13%)
Query: 332 LGKGTFGMAYKAILEDGTTVV-VKRLKDVNVGKRDFEQQM----EIVGSIRHENVVELKA 386
LGKG FG Y A + ++ +K L + K E Q+ EI +RH N++ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLH--SERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXX 444
Y++ ++ +Y LG+V L S+ E R
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT----------ATYITELANALSYCH 128
Query: 445 XXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTIT-SALAPVIARAAGYRAPEVTDSRKATQ 503
+++H +IK N+ L S ++D G + S+ + Y PE+ + R +
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE 188
Query: 504 ASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIE 563
D++S GV+ E L GK P E + R E+T F E R
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR----- 237
Query: 564 EEMVEMLQIAMSCVVRMPDQRPKMPDVVR----VIENVRPNDSENRPSSGNKS 612
+++ L + P QRP + +V+ + +P++ +N+ S+ +S
Sbjct: 238 -DLISRL------LKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESASKQS 283
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 113/291 (38%), Gaps = 42/291 (14%)
Query: 332 LGKGTFGMAYKAIL--------EDGTTVVVKRLKDVNVGK--RDFEQQMEIVGSI-RHEN 380
LG+G FG A ++ TV VK LKD K D +ME++ I +H+N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 381 VVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEG--------RIPLDWDTXXXXXXX 432
++ L ++ +Y S G++ L + R G R+P + T
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 433 XXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG--- 489
K +H ++ + N+ + ++D GL + + G
Sbjct: 152 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP 211
Query: 490 --YRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREE 546
+ APE R T SDV+SFGV++ EI T G SP +EL L++ H + +
Sbjct: 212 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP- 270
Query: 547 WTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
N E+ M++ C +P QRP +V ++ +
Sbjct: 271 -------------ANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 305
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 115/293 (39%), Gaps = 40/293 (13%)
Query: 332 LGKGTFGMAYKAILEDGTTVV-VKRLKDVNVGKRDFEQQM----EIVGSIRHENVVELKA 386
LGKG FG Y A + ++ +K L + K E Q+ EI +RH N++ L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLH--SERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXX 444
Y++ ++ +Y LG+V L S+ E R
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT----------ATYITELANALSYCH 130
Query: 445 XXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTIT-SALAPVIARAAGYRAPEVTDSRKATQ 503
+++H +IK N+ L S ++D G + S+ + Y PE + R +
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEXIEGRXHDE 190
Query: 504 ASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIE 563
D++S GV+ E L GK P E + R E+T F E R
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR----- 239
Query: 564 EEMVEMLQIAMSCVVRMPDQRPKMPDVVR----VIENVRPNDSENRPSSGNKS 612
+++ L + P QRP + +V+ + +P++ +N+ S+ +S
Sbjct: 240 -DLISRL------LKHNPSQRPXLREVLEHPWITANSSKPSNCQNKESASKQS 285
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 118/300 (39%), Gaps = 49/300 (16%)
Query: 329 AEVLGKGTFGMAYKAIL------EDGTTVVVKRLKDVNVGK---RDFEQQMEIVGSIRHE 379
+ LG+G FG KA TTV VK LK+ N RD + ++ + H
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKE-NASPSELRDLLSEFNVLKQVNHP 86
Query: 380 NVVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSER--GEGRIP---------LDWD---- 424
+V++L L++ +Y GS+ L R G G + LD
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 425 -TXXXXXXXXXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPV 483
T KLVH ++ + NI + + +SD GL+
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSX 206
Query: 484 IARAAG-----YRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVR 537
+ R+ G + A E T SDV+SFGV+L EI+T G +P + L +L++
Sbjct: 207 VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLK 266
Query: 538 WVHSVVREEWTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
H + R + +E EM ++ + C + PD+RP D+ + +E +
Sbjct: 267 TGHRMERPDNCSE-----------------EMYRLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 116/293 (39%), Gaps = 40/293 (13%)
Query: 332 LGKGTFGMAYKAILEDGTTVV-VKRLKDVNVGKRDFEQQM----EIVGSIRHENVVELKA 386
LGKG FG Y A + ++ +K L + K E Q+ EI +RH N++ L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLH--SERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXX 444
Y++ ++ +Y LG+V L S+ E R
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT----------ATYITELANALSYCH 130
Query: 445 XXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTIT-SALAPVIARAAGYRAPEVTDSRKATQ 503
+++H +IK N+ L S ++D G + S+ + Y PE+ + R +
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE 190
Query: 504 ASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIE 563
D++S GV+ E L GK P E + R E+T F E R
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR----- 239
Query: 564 EEMVEMLQIAMSCVVRMPDQRPKMPDVVR----VIENVRPNDSENRPSSGNKS 612
+++ L + P QRP + +V+ + +P++ +N+ S+ +S
Sbjct: 240 -DLISRL------LKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESASKQS 285
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 85/212 (40%), Gaps = 26/212 (12%)
Query: 332 LGKGTFGMAYKAILEDGTTVV-VKRLKDVNVGKRDFEQQM----EIVGSIRHENVVELKA 386
LGKG FG Y A + ++ +K L + K E Q+ EI +RH N++ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLH--SERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXX 444
Y++ ++ +Y LG+V L S+ E R
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR----------TATYITELANALSYCH 125
Query: 445 XXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA-----GYRAPEVTDSR 499
+++H +IK N+ L S ++D G S AP RAA Y PE+ + R
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRAALCGTLDYLPPEMIEGR 181
Query: 500 KATQASDVYSFGVVLLEILTGKSPIHTTGGDE 531
+ D++S GV+ E L GK P E
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 213
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 113/291 (38%), Gaps = 42/291 (14%)
Query: 332 LGKGTFGMAYKAIL--------EDGTTVVVKRLKDVNVGK--RDFEQQMEIVGSI-RHEN 380
LG+G FG A ++ TV VK LKD K D +ME++ I +H+N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 381 VVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEG--------RIPLDWDTXXXXXXX 432
++ L ++ +Y S G++ L + R G R+P + T
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 433 XXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG--- 489
K +H ++ + N+ + ++D GL + + G
Sbjct: 150 TYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP 209
Query: 490 --YRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREE 546
+ APE R T SDV+SFGV++ EI T G SP +EL L++ H + +
Sbjct: 210 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA 269
Query: 547 WTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
N E+ M++ C +P QRP +V ++ +
Sbjct: 270 --------------NCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 303
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 118/300 (39%), Gaps = 49/300 (16%)
Query: 329 AEVLGKGTFGMAYKAIL------EDGTTVVVKRLKDVNVGK---RDFEQQMEIVGSIRHE 379
+ LG+G FG KA TTV VK LK+ N RD + ++ + H
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKE-NASPSELRDLLSEFNVLKQVNHP 86
Query: 380 NVVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSER--GEGRIP---------LDWD---- 424
+V++L L++ +Y GS+ L R G G + LD
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 425 -TXXXXXXXXXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPV 483
T KLVH ++ + NI + + +SD GL+
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSY 206
Query: 484 IARAAG-----YRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVR 537
+ R+ G + A E T SDV+SFGV+L EI+T G +P + L +L++
Sbjct: 207 VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLK 266
Query: 538 WVHSVVREEWTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
H + R + +E EM ++ + C + PD+RP D+ + +E +
Sbjct: 267 TGHRMERPDNCSE-----------------EMYRLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 119/274 (43%), Gaps = 32/274 (11%)
Query: 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYY 389
EV+G+G FG+ KA V +K+++ + ++ F ++ + + H N+V+L Y
Sbjct: 14 EVVGRGAFGVVCKAKWR-AKDVAIKQIESES-ERKAFIVELRQLSRVNHPNIVKL--YGA 69
Query: 390 SKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXK-- 447
+ +V +Y GS+ +LH G PL + T +
Sbjct: 70 CLNPVCLVMEYAEGGSLYNVLH-----GAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPK 124
Query: 448 -LVHGNIKSSNIFLNSQQYGC-VSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQAS 505
L+H ++K N+ L + + D G +A + APEV + ++
Sbjct: 125 ALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKC 184
Query: 506 DVYSFGVVLLEILTGKSPIHTTGGDELVHLVRW-VHSVVREEWTAEVFDVELLRYPNIEE 564
DV+S+G++L E++T + P GG + W VH+ R P + +
Sbjct: 185 DVFSWGIILWEVITRRKPFDEIGGPAF--RIMWAVHNGTR---------------PPLIK 227
Query: 565 EMVEMLQIAMS-CVVRMPDQRPKMPDVVRVIENV 597
+ + ++ M+ C + P QRP M ++V+++ ++
Sbjct: 228 NLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHL 261
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 113/291 (38%), Gaps = 42/291 (14%)
Query: 332 LGKGTFGMAYKAIL--------EDGTTVVVKRLKDVNVGK--RDFEQQMEIVGSI-RHEN 380
LG+G FG A ++ TV VK LKD K D +ME++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 381 VVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEG--------RIPLDWDTXXXXXXX 432
++ L ++ +Y S G++ L + R G R+P + T
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 433 XXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG--- 489
K +H ++ + N+ + ++D GL + + G
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP 222
Query: 490 --YRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREE 546
+ APE R T SDV+SFGV++ EI T G SP +EL L++ H + +
Sbjct: 223 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP- 281
Query: 547 WTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
N E+ M++ C +P QRP +V ++ +
Sbjct: 282 -------------ANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 114/296 (38%), Gaps = 52/296 (17%)
Query: 332 LGKGTFGMAYKAIL--------EDGTTVVVKRLKDVNVGK--RDFEQQMEIVGSI-RHEN 380
LG+G FG A ++ TV VK LKD K D +ME++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 381 VVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEG--------RIPLDWDTXXXXXXX 432
++ L ++ +Y S G++ L + R G R+P + T
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 433 XXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLT----------TITSALAP 482
K +H ++ + N+ + ++D GL T+ P
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLP 222
Query: 483 VIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHS 541
V + APE R T SDV+SFGV++ EI T G SP +EL L++ H
Sbjct: 223 V-----KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR 277
Query: 542 VVREEWTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
+ + N E+ M++ C +P QRP +V ++ +
Sbjct: 278 MDKP--------------ANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 114/296 (38%), Gaps = 52/296 (17%)
Query: 332 LGKGTFGMAYKAIL--------EDGTTVVVKRLKDVNVGK--RDFEQQMEIVGSI-RHEN 380
LG+G FG A ++ TV VK LKD K D +ME++ I +H+N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 381 VVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEG--------RIPLDWDTXXXXXXX 432
++ L ++ +Y S G++ L + R G R+P + T
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 433 XXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLT----------TITSALAP 482
K +H ++ + N+ + ++D GL T+ P
Sbjct: 209 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP 268
Query: 483 VIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHS 541
V + APE R T SDV+SFGV++ EI T G SP +EL L++ H
Sbjct: 269 V-----KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR 323
Query: 542 VVREEWTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
+ + N E+ M++ C +P QRP +V ++ +
Sbjct: 324 MDKPA--------------NCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 362
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 119/274 (43%), Gaps = 32/274 (11%)
Query: 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYY 389
EV+G+G FG+ KA V +K+++ + ++ F ++ + + H N+V+L Y
Sbjct: 15 EVVGRGAFGVVCKAKWR-AKDVAIKQIESES-ERKAFIVELRQLSRVNHPNIVKL--YGA 70
Query: 390 SKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXK-- 447
+ +V +Y GS+ +LH G PL + T +
Sbjct: 71 CLNPVCLVMEYAEGGSLYNVLH-----GAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPK 125
Query: 448 -LVHGNIKSSNIFLNSQQYGC-VSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQAS 505
L+H ++K N+ L + + D G +A + APEV + ++
Sbjct: 126 ALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKC 185
Query: 506 DVYSFGVVLLEILTGKSPIHTTGGDELVHLVRW-VHSVVREEWTAEVFDVELLRYPNIEE 564
DV+S+G++L E++T + P GG + W VH+ R P + +
Sbjct: 186 DVFSWGIILWEVITRRKPFDEIGGPAF--RIMWAVHNGTR---------------PPLIK 228
Query: 565 EMVEMLQIAMS-CVVRMPDQRPKMPDVVRVIENV 597
+ + ++ M+ C + P QRP M ++V+++ ++
Sbjct: 229 NLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHL 262
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 116/293 (39%), Gaps = 40/293 (13%)
Query: 332 LGKGTFGMAYKAILEDGTTVV-VKRLKDVNVGKRDFEQQM----EIVGSIRHENVVELKA 386
LGKG FG Y A + ++ +K L + K E Q+ EI +RH N++ L
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLH--SERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXX 444
Y++ ++ +Y LG+V L S+ E R
Sbjct: 93 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT----------ATYITELANALSYCH 142
Query: 445 XXKLVHGNIKSSNIFLNSQQYGCVSDLGLTT-ITSALAPVIARAAGYRAPEVTDSRKATQ 503
+++H +IK N+ L S ++D G + S+ + Y PE+ + R +
Sbjct: 143 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE 202
Query: 504 ASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIE 563
D++S GV+ E L GK P E + R E+T F E R
Sbjct: 203 KVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR----- 251
Query: 564 EEMVEMLQIAMSCVVRMPDQRPKMPDVVR----VIENVRPNDSENRPSSGNKS 612
+++ L + P QRP + +V+ + +P++ +N+ S+ +S
Sbjct: 252 -DLISRL------LKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESASKQS 297
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 116/293 (39%), Gaps = 40/293 (13%)
Query: 332 LGKGTFGMAYKAILEDGTTVV-VKRLKDVNVGKRDFEQQM----EIVGSIRHENVVELKA 386
LGKG FG Y A + ++ +K L + K E Q+ EI +RH N++ L
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLH--SERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXX 444
Y++ ++ +Y LG+V L S+ E R
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT----------ATYITELANALSYCH 127
Query: 445 XXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTIT-SALAPVIARAAGYRAPEVTDSRKATQ 503
+++H +IK N+ L S ++D G + S+ + Y PE+ + R +
Sbjct: 128 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDE 187
Query: 504 ASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIE 563
D++S GV+ E L GK P E + R E+T F E R
Sbjct: 188 KVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR----- 236
Query: 564 EEMVEMLQIAMSCVVRMPDQRPKMPDVVR----VIENVRPNDSENRPSSGNKS 612
+++ L + P QRP + +V+ + +P++ +N+ S+ +S
Sbjct: 237 -DLISRL------LKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESASKQS 282
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 113/291 (38%), Gaps = 42/291 (14%)
Query: 332 LGKGTFGMAYKAIL--------EDGTTVVVKRLKDVNVGK--RDFEQQMEIVGSI-RHEN 380
LG+G FG A ++ TV VK LKD K D +ME++ I +H+N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 381 VVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEG--------RIPLDWDTXXXXXXX 432
++ L ++ +Y S G++ L + R G R+P + T
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 433 XXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG--- 489
K +H ++ + N+ + ++D GL + + G
Sbjct: 155 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP 214
Query: 490 --YRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREE 546
+ APE R T SDV+SFGV++ EI T G SP +EL L++ H + +
Sbjct: 215 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP- 273
Query: 547 WTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
N E+ M++ C +P QRP +V ++ +
Sbjct: 274 -------------ANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 308
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 113/291 (38%), Gaps = 42/291 (14%)
Query: 332 LGKGTFGMAYKAIL--------EDGTTVVVKRLKDVNVGK--RDFEQQMEIVGSI-RHEN 380
LG+G FG A ++ TV VK LKD K D +ME++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 381 VVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEG--------RIPLDWDTXXXXXXX 432
++ L ++ +Y S G++ L + R G R+P + T
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 433 XXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG--- 489
K +H ++ + N+ + ++D GL + + G
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLP 222
Query: 490 --YRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREE 546
+ APE R T SDV+SFGV++ EI T G SP +EL L++ H + +
Sbjct: 223 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP- 281
Query: 547 WTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
N E+ M++ C +P QRP +V ++ +
Sbjct: 282 -------------ANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 113/291 (38%), Gaps = 42/291 (14%)
Query: 332 LGKGTFGMAYKAIL--------EDGTTVVVKRLKDVNVGK--RDFEQQMEIVGSI-RHEN 380
LG+G FG A ++ TV VK LKD K D +ME++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 381 VVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEG--------RIPLDWDTXXXXXXX 432
++ L ++ +Y S G++ L + R G R+P + T
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 433 XXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG--- 489
K +H ++ + N+ + ++D GL + + G
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP 222
Query: 490 --YRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREE 546
+ APE R T SDV+SFGV++ EI T G SP +EL L++ H + +
Sbjct: 223 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP- 281
Query: 547 WTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
N E+ M++ C +P QRP +V ++ +
Sbjct: 282 -------------ANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 116/293 (39%), Gaps = 40/293 (13%)
Query: 332 LGKGTFGMAYKAILEDGTTVV-VKRLKDVNVGKRDFEQQM----EIVGSIRHENVVELKA 386
LGKG FG Y A + ++ +K L + K E Q+ EI +RH N++ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLH--SERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXX 444
Y++ ++ +Y LG+V L S+ E R
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT----------ATYITELANALSYCH 125
Query: 445 XXKLVHGNIKSSNIFLNSQQYGCVSDLGLTT-ITSALAPVIARAAGYRAPEVTDSRKATQ 503
+++H +IK N+ L S ++D G + S+ + Y PE+ + R +
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELCGTLDYLPPEMIEGRMHDE 185
Query: 504 ASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIE 563
D++S GV+ E L GK P E + R E+T F E R
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR----- 234
Query: 564 EEMVEMLQIAMSCVVRMPDQRPKMPDVVR----VIENVRPNDSENRPSSGNKS 612
+++ L + P QRP + +V+ + +P++ +N+ S+ +S
Sbjct: 235 -DLISRL------LKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESASKQS 280
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 116/293 (39%), Gaps = 40/293 (13%)
Query: 332 LGKGTFGMAYKAILEDGTTVV-VKRLKDVNVGKRDFEQQM----EIVGSIRHENVVELKA 386
LGKG FG Y A + ++ +K L + K E Q+ EI +RH N++ L
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLH--SERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXX 444
Y++ ++ +Y LG+V L S+ E R
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT----------ATYITELANALSYCH 151
Query: 445 XXKLVHGNIKSSNIFLNSQQYGCVSDLGLTT-ITSALAPVIARAAGYRAPEVTDSRKATQ 503
+++H +IK N+ L S ++D G + S+ + Y PE+ + R +
Sbjct: 152 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDE 211
Query: 504 ASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIE 563
D++S GV+ E L GK P E + R E+T F E R
Sbjct: 212 KVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR----- 260
Query: 564 EEMVEMLQIAMSCVVRMPDQRPKMPDVVR----VIENVRPNDSENRPSSGNKS 612
+++ L + P QRP + +V+ + +P++ +N+ S+ +S
Sbjct: 261 -DLISRL------LKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESASKQS 306
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 110/287 (38%), Gaps = 43/287 (14%)
Query: 330 EVLGKGTFGMAYKAILE----DGTTVVVKRLKDVNVG-----KRDFEQQMEIVGSIRHEN 380
+V+G G FG L+ +V +K LK VG +RDF + I+G H N
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK---VGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 381 VVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXX 440
++ L+ ++V + GS+ + L + T
Sbjct: 108 IIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQF-------TVIQLVGMLRGIASGM 160
Query: 441 XXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG------YRAPE 494
VH ++ + NI +NS VSD GL+ + G + +PE
Sbjct: 161 KYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 495 VTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFD 553
RK T ASDV+S+G+VL E+++ G+ P +++ V
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD---------------- 264
Query: 554 VELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600
E R P + + Q+ + C + + RPK +V +++ + N
Sbjct: 265 -EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 117/277 (42%), Gaps = 38/277 (13%)
Query: 320 DLEDLLRASAEV---LGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSI 376
D+ ++ R S ++ LG G FG + T V +K LK + F ++ +I+ +
Sbjct: 2 DVWEIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKL 61
Query: 377 RHENVVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGR---IPLDWDTXXXXXXXX 433
+H+ +V+L A S++ +V +Y + GS+ L GEGR +P
Sbjct: 62 KHDKLVQLYA-VVSEEPIYIVTEYMNKGSLLDFLKD--GEGRALKLP-------NLVDMA 111
Query: 434 XXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA----G 489
+H +++S+NI + + ++D GL + + A
Sbjct: 112 AQVAAGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIK 171
Query: 490 YRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWT 548
+ APE + T SDV+SFG++L E++T G+ P E++ V +
Sbjct: 172 WTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGY-------- 223
Query: 549 AEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRP 585
R P ++ + + ++ + C + P++RP
Sbjct: 224 ---------RMPCPQDCPISLHELMIHCWKKDPEERP 251
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 110/287 (38%), Gaps = 43/287 (14%)
Query: 330 EVLGKGTFGMAYKAILE----DGTTVVVKRLKDVNVG-----KRDFEQQMEIVGSIRHEN 380
+V+G G FG L+ +V +K LK VG +RDF + I+G H N
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK---VGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 381 VVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXX 440
++ L+ ++V + GS+ + L + T
Sbjct: 108 IIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQF-------TVIQLVGMLRGIASGM 160
Query: 441 XXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG------YRAPE 494
VH ++ + NI +NS VSD GL+ + G + +PE
Sbjct: 161 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 495 VTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFD 553
RK T ASDV+S+G+VL E+++ G+ P +++ V
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD---------------- 264
Query: 554 VELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600
E R P + + Q+ + C + + RPK +V +++ + N
Sbjct: 265 -EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 110/287 (38%), Gaps = 43/287 (14%)
Query: 330 EVLGKGTFGMAYKAILE----DGTTVVVKRLKDVNVG-----KRDFEQQMEIVGSIRHEN 380
+V+G G FG L+ +V +K LK VG +RDF + I+G H N
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK---VGYTEKQRRDFLGEASIMGQFDHPN 78
Query: 381 VVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXX 440
++ L+ ++V + GS+ + L + T
Sbjct: 79 IIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQF-------TVIQLVGMLRGIASGM 131
Query: 441 XXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG------YRAPE 494
VH ++ + NI +NS VSD GL+ + G + +PE
Sbjct: 132 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 191
Query: 495 VTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFD 553
RK T ASDV+S+G+VL E+++ G+ P +++ V
Sbjct: 192 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD---------------- 235
Query: 554 VELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPN 600
E R P + + Q+ + C + + RPK +V +++ + N
Sbjct: 236 -EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 281
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 112/291 (38%), Gaps = 42/291 (14%)
Query: 332 LGKGTFGMAYKAIL--------EDGTTVVVKRLKDVNVGK--RDFEQQMEIVGSI-RHEN 380
LG+G FG A ++ TV VK LKD K D +ME++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 381 VVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEG--------RIPLDWDTXXXXXXX 432
++ L ++ Y S G++ L + R G R+P + T
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 433 XXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG--- 489
K +H ++ + N+ + ++D GL + + G
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP 222
Query: 490 --YRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREE 546
+ APE R T SDV+SFGV++ EI T G SP +EL L++ H + +
Sbjct: 223 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP- 281
Query: 547 WTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
N E+ M++ C +P QRP +V ++ +
Sbjct: 282 -------------ANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 116/293 (39%), Gaps = 40/293 (13%)
Query: 332 LGKGTFGMAYKAILEDGTTVV-VKRLKDVNVGKRDFEQQM----EIVGSIRHENVVELKA 386
LGKG FG Y A + ++ +K L + K E Q+ EI +RH N++ L
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLH--SERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXX 444
Y++ ++ +Y LG+V L S+ E R
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT----------ATYITELANALSYCH 127
Query: 445 XXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTIT-SALAPVIARAAGYRAPEVTDSRKATQ 503
+++H +IK N+ L S +++ G + S+ + Y PE+ + R +
Sbjct: 128 SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE 187
Query: 504 ASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIE 563
D++S GV+ E L GK P E + R E+T F E R
Sbjct: 188 KVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR----- 236
Query: 564 EEMVEMLQIAMSCVVRMPDQRPKMPDVVR----VIENVRPNDSENRPSSGNKS 612
+++ L + P QRP + +V+ + +P++ +N+ S+ +S
Sbjct: 237 -DLISRL------LKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESASKQS 282
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 112/291 (38%), Gaps = 42/291 (14%)
Query: 332 LGKGTFGMAYKAIL--------EDGTTVVVKRLKDVNVGK--RDFEQQMEIVGSI-RHEN 380
LG+G FG A ++ TV VK LKD K D +ME++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 381 VVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEG--------RIPLDWDTXXXXXXX 432
++ L ++ Y S G++ L + R G R+P + T
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 433 XXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG--- 489
K +H ++ + N+ + ++D GL + + G
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP 222
Query: 490 --YRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREE 546
+ APE R T SDV+SFGV++ EI T G SP +EL L++ H + +
Sbjct: 223 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP- 281
Query: 547 WTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
N E+ M++ C +P QRP +V ++ +
Sbjct: 282 -------------ANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 113/291 (38%), Gaps = 42/291 (14%)
Query: 332 LGKGTFGMAYKAIL--------EDGTTVVVKRLKDVNVGK--RDFEQQMEIVGSI-RHEN 380
LG+G FG A ++ TV VK LKD + D +ME++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 381 VVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEG--------RIPLDWDTXXXXXXX 432
++ L ++ +Y S G++ L + R G R+P + T
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 433 XXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG--- 489
K +H ++ + N+ + ++D GL + + G
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP 222
Query: 490 --YRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREE 546
+ APE R T SDV+SFGV++ EI T G SP +EL L++ H + +
Sbjct: 223 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP- 281
Query: 547 WTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
N E+ M++ C +P QRP +V ++ +
Sbjct: 282 -------------ANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 116/293 (39%), Gaps = 39/293 (13%)
Query: 332 LGKGTFGMAYKAILEDGTTVV-VKRLKDVNVGKRDFEQQM----EIVGSIRHENVVELKA 386
LGKG FG Y A + ++ +K L + K E Q+ EI +RH N++ L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLH--SERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXX 444
Y++ ++ +Y LG+V L S+ E R
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT----------ATYITELANALSYCH 126
Query: 445 XXKLVHGNIKSSNIFLNSQQYGCVSDLGLTT-ITSALAPVIARAAGYRAPEVTDSRKATQ 503
+++H +IK N+ L S ++D G + S+ + Y PE+ + R +
Sbjct: 127 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDE 186
Query: 504 ASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIE 563
D++S GV+ E L GK P E + R E+T F E R
Sbjct: 187 KVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR----- 235
Query: 564 EEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPNDSENRPSSGNKSESST 616
+++ L + P QRP + + V+E+ + ++PS+ ES++
Sbjct: 236 -DLISRL------LKHNPSQRPMLRE---VLEHPWITANSSKPSNCQNKESAS 278
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 117/300 (39%), Gaps = 49/300 (16%)
Query: 329 AEVLGKGTFGMAYKAIL------EDGTTVVVKRLKDVNVGK---RDFEQQMEIVGSIRHE 379
+ LG+G FG KA TTV VK LK+ N RD + ++ + H
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKE-NASPSELRDLLSEFNVLKQVNHP 86
Query: 380 NVVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSER--GEGRIP---------LDWD---- 424
+V++L L++ +Y GS+ L R G G + LD
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 425 -TXXXXXXXXXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPV 483
T LVH ++ + NI + + +SD GL+
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSX 206
Query: 484 IARAAG-----YRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVR 537
+ R+ G + A E T SDV+SFGV+L EI+T G +P + L +L++
Sbjct: 207 VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLK 266
Query: 538 WVHSVVREEWTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
H + R + +E EM ++ + C + PD+RP D+ + +E +
Sbjct: 267 TGHRMERPDNCSE-----------------EMYRLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 112/272 (41%), Gaps = 29/272 (10%)
Query: 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYY 389
E LG G FG + T V VK LK ++ F + ++ ++H+ +V L A
Sbjct: 15 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VV 73
Query: 390 SKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLV 449
+++ ++ +Y GS+ L + G I L T +
Sbjct: 74 TQEPIYIITEYMENGSLVDFLKTPSG---IKL---TINKLLDMAAQIAEGMAFIEERNYI 127
Query: 450 HGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGY----RAPEVTDSRKATQAS 505
H N++++NI ++ ++D GL + A + APE + T S
Sbjct: 128 HRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 187
Query: 506 DVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEE 564
DV+SFG++L EI+T G+ P E++ + + +VR + N E
Sbjct: 188 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD--------------NCPE 233
Query: 565 EMVEMLQIAMSCVVRMPDQRPKMPDVVRVIEN 596
E+ +++++ C P+ RP + V+E+
Sbjct: 234 ELYQLMRL---CWKERPEDRPTFDYLRSVLED 262
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 87/219 (39%), Gaps = 20/219 (9%)
Query: 314 GCNYAFDLEDLLRASAEVLGKGTFGMAYKAILEDGTTVV-VKRLKDVNVGKRDFEQQM-- 370
G + LED LGKG FG Y A + ++ +K L + K E Q+
Sbjct: 4 GSKRQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 61
Query: 371 --EIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGSVSAMLH--SERGEGRIPLDWDTX 426
EI +RH N++ L Y++ ++ +Y LG+V L S+ E R
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT------- 114
Query: 427 XXXXXXXXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTIT-SALAPVIA 485
+++H +IK N+ L S ++D G + S+ +
Sbjct: 115 ---ATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC 171
Query: 486 RAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPI 524
Y PE+ + R + D++S GV+ E L GK P
Sbjct: 172 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 210
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 83/208 (39%), Gaps = 18/208 (8%)
Query: 332 LGKGTFGMAYKAILEDGTTVV-VKRLKDVNVGKRDFEQQM----EIVGSIRHENVVELKA 386
LGKG FG Y A + ++ +K L + K E Q+ EI +RH N++ L
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLH--SERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXX 444
Y++ ++ +Y LG+V L S+ E R
Sbjct: 75 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT----------ATYITELANALSYCH 124
Query: 445 XXKLVHGNIKSSNIFLNSQQYGCVSDLGLTT-ITSALAPVIARAAGYRAPEVTDSRKATQ 503
+++H +IK N+ L S ++D G + S+ + Y PE+ + R +
Sbjct: 125 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE 184
Query: 504 ASDVYSFGVVLLEILTGKSPIHTTGGDE 531
D++S GV+ E L GK P E
Sbjct: 185 KVDLWSLGVLCYEFLVGKPPFEANTYQE 212
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 114/290 (39%), Gaps = 40/290 (13%)
Query: 332 LGKGTFGMAYKAILEDGTTVV-VKRLKDVNVGKRDFEQQM----EIVGSIRHENVVELKA 386
LGKG FG Y A + ++ +K L + K E Q+ EI +RH N++ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLH--SERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXX 444
Y++ ++ +Y LG+V L S+ E R
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT----------ATYITELANALSYCH 125
Query: 445 XXKLVHGNIKSSNIFLNSQQYGCVSDLGLTT-ITSALAPVIARAAGYRAPEVTDSRKATQ 503
+++H +IK N+ L S ++D G + S+ + Y PE+ + R +
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDE 185
Query: 504 ASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIE 563
D++S GV+ E L GK P E + R E+T F E R
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR----- 234
Query: 564 EEMVEMLQIAMSCVVRMPDQRPKMPDVVR----VIENVRPNDSENRPSSG 609
+++ L + P QRP + +V+ + +P++ +N+ S+
Sbjct: 235 -DLISRL------LKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESAA 277
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 83/208 (39%), Gaps = 18/208 (8%)
Query: 332 LGKGTFGMAYKAILEDGTTVV-VKRLKDVNVGKRDFEQQM----EIVGSIRHENVVELKA 386
LGKG FG Y A + ++ +K L + K E Q+ EI +RH N++ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLH--SERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXX 444
Y++ ++ +Y LG+V L S+ E R
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR----------TATYITELANALSYCH 128
Query: 445 XXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTIT-SALAPVIARAAGYRAPEVTDSRKATQ 503
+++H +IK N+ L S ++D G + S+ + Y PE+ + R +
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE 188
Query: 504 ASDVYSFGVVLLEILTGKSPIHTTGGDE 531
D++S GV+ E L GK P E
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEANTYQE 216
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 83/208 (39%), Gaps = 18/208 (8%)
Query: 332 LGKGTFGMAYKAILEDGTTVV-VKRLKDVNVGKRDFEQQM----EIVGSIRHENVVELKA 386
LGKG FG Y A + ++ +K L + K E Q+ EI +RH N++ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLH--SERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXX 444
Y++ ++ +Y LG+V L S+ E R
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR----------TATYITELANALSYCH 125
Query: 445 XXKLVHGNIKSSNIFLNSQQYGCVSDLGLTT-ITSALAPVIARAAGYRAPEVTDSRKATQ 503
+++H +IK N+ L S ++D G + S+ + Y PE+ + R +
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDE 185
Query: 504 ASDVYSFGVVLLEILTGKSPIHTTGGDE 531
D++S GV+ E L GK P E
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQE 213
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 92/216 (42%), Gaps = 30/216 (13%)
Query: 332 LGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSK 391
+G G FG+ + + V +K +K+ ++ + DF ++ E++ + H +V+L +
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQ 94
Query: 392 DEKLMVYDYYSLGSVSAMLHSERG----EGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXK 447
+V+++ G +S L ++RG E + + D
Sbjct: 95 APICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC----------- 143
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTI---------TSALAPVIARAAGYRAPEVTDS 498
++H ++ + N + Q VSD G+T T PV + +PEV
Sbjct: 144 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-----KWASPEVFSF 198
Query: 499 RKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELV 533
+ + SDV+SFGV++ E+ + GK P E+V
Sbjct: 199 SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV 234
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 114/293 (38%), Gaps = 40/293 (13%)
Query: 332 LGKGTFGMAYKAILEDGTTVV-VKRLKDVNVGKRDFEQQM----EIVGSIRHENVVELKA 386
LGKG FG Y A + ++ +K L + K E Q+ EI +RH N++ L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLH--SERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXX 444
Y++ ++ +Y G V L S+ E R
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRT----------ATYITELANALSYCH 130
Query: 445 XXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTIT-SALAPVIARAAGYRAPEVTDSRKATQ 503
+++H +IK N+ L S ++D G + S+ + Y PE+ + R +
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE 190
Query: 504 ASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIE 563
D++S GV+ E L GK P E + R E+T F E R
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR----- 239
Query: 564 EEMVEMLQIAMSCVVRMPDQRPKMPDVVR----VIENVRPNDSENRPSSGNKS 612
+++ L + P QRP + +V+ + +P++ +N+ S+ +S
Sbjct: 240 -DLISRL------LKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESASKQS 285
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 83/208 (39%), Gaps = 18/208 (8%)
Query: 332 LGKGTFGMAYKAILEDGTTVV-VKRLKDVNVGKRDFEQQM----EIVGSIRHENVVELKA 386
LGKG FG Y A + ++ +K L + K E Q+ EI +RH N++ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLH--SERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXX 444
Y++ ++ +Y LG+V L S+ E R
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT----------ATYITELANALSYCH 125
Query: 445 XXKLVHGNIKSSNIFLNSQQYGCVSDLGLTT-ITSALAPVIARAAGYRAPEVTDSRKATQ 503
+++H +IK N+ L S ++D G + S+ + Y PE+ + R +
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLCGTLDYLPPEMIEGRMHDE 185
Query: 504 ASDVYSFGVVLLEILTGKSPIHTTGGDE 531
D++S GV+ E L GK P E
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQE 213
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 120/284 (42%), Gaps = 41/284 (14%)
Query: 329 AEVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGK------RDFEQQMEIVGSIRHENVV 382
+ +G G+FG YK V K +NV + F+ ++ ++ RH N++
Sbjct: 17 GQRIGSGSFGTVYKGKWHGDVAV-----KMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 71
Query: 383 ELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXX 442
L Y +K + +V + S+ LH+ + + D
Sbjct: 72 -LFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS-- 128
Query: 443 XXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALA-----PVIARAAGYRAPEV-- 495
++H ++KS+NIFL+ + D GL T+ S + ++ + + APEV
Sbjct: 129 -----IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 183
Query: 496 -TDSRKATQASDVYSFGVVLLEILTGKSPIHTTGG-DELVHLVRWVHSVVREEWTAEVFD 553
DS + SDVY+FG+VL E++TG+ P D+++ +V R + ++
Sbjct: 184 MQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVG------RGSLSPDLSK 237
Query: 554 VELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
V N + M ++ C+ + D+RP P ++ IE +
Sbjct: 238 VR----SNCPKRMKRLM---AECLKKKRDERPSFPRILAEIEEL 274
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 111/279 (39%), Gaps = 33/279 (11%)
Query: 332 LGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSK 391
LG G FG+ + V VK +K+ ++ + +F Q+ + + + H +V+ +
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKE 75
Query: 392 DEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVHG 451
+V +Y S G + L S G+G P + +H
Sbjct: 76 YPIYIVTEYISNGCLLNYLRS-HGKGLEP------SQLLEMCYDVCEGMAFLESHQFIHR 128
Query: 452 NIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG------YRAPEVTDSRKATQAS 505
++ + N ++ VSD G+T L + G + APEV K + S
Sbjct: 129 DLAARNCLVDRDLCVKVSDFGMTRY--VLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKS 186
Query: 506 DVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEE 564
DV++FG+++ E+ + GK P E+V V H + R P++
Sbjct: 187 DVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYR---------------PHLAS 231
Query: 565 EMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPNDSE 603
+ + QI SC +P++RP ++ IE +R D
Sbjct: 232 DTI--YQIMYSCWHELPEKRPTFQQLLSSIEPLREKDKH 268
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 116/293 (39%), Gaps = 39/293 (13%)
Query: 332 LGKGTFGMAYKAILEDGTTVV-VKRLKDVNVGKRDFEQQM----EIVGSIRHENVVELKA 386
LGKG FG Y A + ++ +K L + K E Q+ EI +RH N++ L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLH--SERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXX 444
Y++ ++ +Y LG+V L S+ E R
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT----------ATYITELANALSYCH 126
Query: 445 XXKLVHGNIKSSNIFLNSQQYGCVSDLGLTT-ITSALAPVIARAAGYRAPEVTDSRKATQ 503
+++H +IK N+ L S ++D G + S+ + Y PE+ + R +
Sbjct: 127 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDE 186
Query: 504 ASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIE 563
D++S GV+ E L GK P E + R E+T F E R
Sbjct: 187 KVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR----- 235
Query: 564 EEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPNDSENRPSSGNKSESST 616
+++ L + P QRP + + V+E+ + ++PS+ ES++
Sbjct: 236 -DLISRL------LKHNPSQRPMLRE---VLEHPWITANSSKPSNCQNKESAS 278
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 88/197 (44%), Gaps = 11/197 (5%)
Query: 332 LGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSK 391
LG G FG + + T V VK LK + + F ++ ++ +++H+ +V L A +
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTRE 80
Query: 392 DEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVHG 451
+ ++ +Y + GS+ L S+ G G++ L +H
Sbjct: 81 EPIYIITEYMAKGSLLDFLKSDEG-GKVLL-----PKLIDFSAQIAEGMAYIERKNYIHR 134
Query: 452 NIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGY----RAPEVTDSRKATQASDV 507
+++++N+ ++ ++D GL + A + APE + T SDV
Sbjct: 135 DLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDV 194
Query: 508 YSFGVVLLEILT-GKSP 523
+SFG++L EI+T GK P
Sbjct: 195 WSFGILLYEIVTYGKIP 211
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 83/208 (39%), Gaps = 18/208 (8%)
Query: 332 LGKGTFGMAYKAILEDGTTVV-VKRLKDVNVGKRDFEQQM----EIVGSIRHENVVELKA 386
LGKG FG Y A + ++ +K L + K E Q+ EI +RH N++ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLH--SERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXX 444
Y++ ++ +Y LG+V L S+ E R
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR----------TATYITELANALSYCH 128
Query: 445 XXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTIT-SALAPVIARAAGYRAPEVTDSRKATQ 503
+++H +IK N+ L S ++D G + S+ + Y PE+ + R +
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDE 188
Query: 504 ASDVYSFGVVLLEILTGKSPIHTTGGDE 531
D++S GV+ E L GK P E
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEANTYQE 216
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 116/293 (39%), Gaps = 39/293 (13%)
Query: 332 LGKGTFGMAYKAILEDGTTVV-VKRLKDVNVGKRDFEQQM----EIVGSIRHENVVELKA 386
LGKG FG Y A + ++ +K L + K E Q+ EI +RH N++ L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLH--SERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXX 444
Y++ ++ +Y LG+V L S+ E R
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT----------ATYITELANALSYCH 130
Query: 445 XXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTIT-SALAPVIARAAGYRAPEVTDSRKATQ 503
+++H +IK N+ L S ++D G + S+ + Y PE+ + R +
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDE 190
Query: 504 ASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIE 563
D++S GV+ E L GK P E + R E+T F E R
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR----- 239
Query: 564 EEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPNDSENRPSSGNKSESST 616
+++ L + P QRP + + V+E+ + ++PS+ ES++
Sbjct: 240 -DLISRL------LKHNPSQRPMLRE---VLEHPWITANSSKPSNCQNKESAS 282
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 83/208 (39%), Gaps = 18/208 (8%)
Query: 332 LGKGTFGMAYKAILEDGTTVV-VKRLKDVNVGKRDFEQQM----EIVGSIRHENVVELKA 386
LGKG FG Y A + ++ +K L + K E Q+ EI +RH N++ L
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLH--SERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXX 444
Y++ ++ +Y LG+V L S+ E R
Sbjct: 73 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR----------TATYITELANALSYCH 122
Query: 445 XXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTIT-SALAPVIARAAGYRAPEVTDSRKATQ 503
+++H +IK N+ L S ++D G + S+ + Y PE+ + R +
Sbjct: 123 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE 182
Query: 504 ASDVYSFGVVLLEILTGKSPIHTTGGDE 531
D++S GV+ E L GK P E
Sbjct: 183 KVDLWSLGVLCYEFLVGKPPFEANTYQE 210
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 83/208 (39%), Gaps = 18/208 (8%)
Query: 332 LGKGTFGMAYKAILEDGTTVV-VKRLKDVNVGKRDFEQQM----EIVGSIRHENVVELKA 386
LGKG FG Y A + ++ +K L + K E Q+ EI +RH N++ L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLH--SERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXX 444
Y++ ++ +Y LG+V L S+ E R
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT----------ATYITELANALSYCH 125
Query: 445 XXKLVHGNIKSSNIFLNSQQYGCVSDLGLTT-ITSALAPVIARAAGYRAPEVTDSRKATQ 503
+++H +IK N+ L S ++D G + S+ + Y PE+ + R +
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDE 185
Query: 504 ASDVYSFGVVLLEILTGKSPIHTTGGDE 531
D++S GV+ E L GK P E
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQE 213
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 112/272 (41%), Gaps = 29/272 (10%)
Query: 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYY 389
E LG G FG + T V VK LK ++ F + ++ ++H+ +V L A
Sbjct: 28 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VV 86
Query: 390 SKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLV 449
+++ ++ +Y GS+ L + G I L T +
Sbjct: 87 TQEPIYIITEYMENGSLVDFLKTPSG---IKL---TINKLLDMAAQIAEGMAFIEERNYI 140
Query: 450 HGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA----GYRAPEVTDSRKATQAS 505
H +++++NI ++ ++D GL + A + APE + T S
Sbjct: 141 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 200
Query: 506 DVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEE 564
DV+SFG++L EI+T G+ P E++ + + +VR + N E
Sbjct: 201 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD--------------NCPE 246
Query: 565 EMVEMLQIAMSCVVRMPDQRPKMPDVVRVIEN 596
E+ +++++ C P+ RP + V+E+
Sbjct: 247 ELYQLMRL---CWKERPEDRPTFDYLRSVLED 275
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 119/292 (40%), Gaps = 53/292 (18%)
Query: 311 FFEGCNYAFDLEDLLRASAEVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGK------- 363
F E + FD ++LRA +GKG+FG I++ T + +K +N K
Sbjct: 6 FDENEDVNFDHFEILRA----IGKGSFGKV--CIVQKNDTKKMYAMKYMNKQKCVERNEV 59
Query: 364 RDFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGSVSAMLHS--ERGEGRIPL 421
R+ ++++I+ + H +V L + +++ MV D G + L E + L
Sbjct: 60 RNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKL 119
Query: 422 DWDTXXXXXXXXXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALA 481
+++H ++K NI L+ + ++D + +
Sbjct: 120 ----------FICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET 169
Query: 482 PVIARAAG--YRAPEVTDSRKA---TQASDVYSFGVVLLEILTGKSPIH---TTGGDELV 533
+ A Y APE+ SRK + A D +S GV E+L G+ P H +T E+V
Sbjct: 170 QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIV 229
Query: 534 HLVRWVHSVVREEWTAEVFDVELLRYPNI-EEEMVEMLQIAMSCVVRMPDQR 584
H F+ ++ YP+ +EMV +L+ + PDQR
Sbjct: 230 H----------------TFETTVVTYPSAWSQEMVSLLKKLLE---PNPDQR 262
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 83/208 (39%), Gaps = 18/208 (8%)
Query: 332 LGKGTFGMAYKAILEDGTTVV-VKRLKDVNVGKRDFEQQM----EIVGSIRHENVVELKA 386
LGKG FG Y A + ++ +K L + K E Q+ EI +RH N++ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLH--SERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXX 444
Y++ ++ +Y LG+V L S+ E R
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR----------TATYITELANALSYCH 128
Query: 445 XXKLVHGNIKSSNIFLNSQQYGCVSDLGLTT-ITSALAPVIARAAGYRAPEVTDSRKATQ 503
+++H +IK N+ L S ++D G + S+ + Y PE+ + R +
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDE 188
Query: 504 ASDVYSFGVVLLEILTGKSPIHTTGGDE 531
D++S GV+ E L GK P E
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEANTYQE 216
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 87/197 (44%), Gaps = 10/197 (5%)
Query: 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYY 389
E LG+G++G YKAI ++ +V + V ++ +++ I+ +VV+ Y+
Sbjct: 35 EKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYF 94
Query: 390 SKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLV 449
+ +V +Y GSVS ++ R+ T + +
Sbjct: 95 KNTDLWIVMEYCGAGSVSDII-------RLRNKTLTEDEIATILQSTLKGLEYLHFMRKI 147
Query: 450 HGNIKSSNIFLNSQQYGCVSDLGLT-TITSALAP--VIARAAGYRAPEVTDSRKATQASD 506
H +IK+ NI LN++ + ++D G+ +T +A + + APEV +D
Sbjct: 148 HRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVAD 207
Query: 507 VYSFGVVLLEILTGKSP 523
++S G+ +E+ GK P
Sbjct: 208 IWSLGITAIEMAEGKPP 224
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 122/278 (43%), Gaps = 32/278 (11%)
Query: 332 LGKGTFGMAYKA-ILEDGTTVVVKRLKDVNV----GKRDFEQQMEIVGSIRHENVVELKA 386
+G+G F Y+A L DG V +K+++ ++ + D ++++++ + H NV++ A
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYA 99
Query: 387 YYYSKDEKLMVYDYYSLGSVSAML-HSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXX 445
+ +E +V + G +S M+ H ++ + IP
Sbjct: 100 SFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIP-----ERTVWKYFVQLCSALEHMHS 154
Query: 446 XKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG---YRAPEVTDSRKAT 502
+++H +IK +N+F+ + + DLGL S+ G Y +PE
Sbjct: 155 RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYN 214
Query: 503 QASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNI 562
SD++S G +L E+ +SP + GD++ ++S+ ++ +E YP +
Sbjct: 215 FKSDIWSLGCLLYEMAALQSPFY---GDKMN-----LYSLCKK--------IEQCDYPPL 258
Query: 563 EEEMV--EMLQIAMSCVVRMPDQRPKMPDVVRVIENVR 598
+ E+ Q+ C+ P++RP + V V + +
Sbjct: 259 PSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMH 296
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 112/272 (41%), Gaps = 29/272 (10%)
Query: 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYY 389
E LG G FG + T V VK LK ++ F + ++ ++H+ +V L A
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VV 77
Query: 390 SKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLV 449
+++ ++ +Y GS+ L + G I L T +
Sbjct: 78 TQEPIYIITEYMENGSLVDFLKTPSG---IKL---TINKLLDMAAQIAEGMAFIEERNYI 131
Query: 450 HGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA----GYRAPEVTDSRKATQAS 505
H +++++NI ++ ++D GL + A + APE + T S
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 506 DVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEE 564
DV+SFG++L EI+T G+ P E++ + + +VR + N E
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD--------------NCPE 237
Query: 565 EMVEMLQIAMSCVVRMPDQRPKMPDVVRVIEN 596
E+ +++++ C P+ RP + V+E+
Sbjct: 238 ELYQLMRL---CWKERPEDRPTFDYLRSVLED 266
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 112/272 (41%), Gaps = 29/272 (10%)
Query: 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYY 389
E LG G FG + T V VK LK ++ F + ++ ++H+ +V L A
Sbjct: 27 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VV 85
Query: 390 SKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLV 449
+++ ++ +Y GS+ L + G I L T +
Sbjct: 86 TQEPIYIITEYMENGSLVDFLKTPSG---IKL---TINKLLDMAAQIAEGMAFIEERNYI 139
Query: 450 HGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA----GYRAPEVTDSRKATQAS 505
H +++++NI ++ ++D GL + A + APE + T S
Sbjct: 140 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 199
Query: 506 DVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEE 564
DV+SFG++L EI+T G+ P E++ + + +VR + N E
Sbjct: 200 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD--------------NCPE 245
Query: 565 EMVEMLQIAMSCVVRMPDQRPKMPDVVRVIEN 596
E+ +++++ C P+ RP + V+E+
Sbjct: 246 ELYQLMRL---CWKERPEDRPTFDYLRSVLED 274
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 91/216 (42%), Gaps = 30/216 (13%)
Query: 332 LGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSK 391
+G G FG+ + + V +K +++ + + DF ++ E++ + H +V+L +
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 74
Query: 392 DEKLMVYDYYSLGSVSAMLHSERG----EGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXK 447
+V+++ G +S L ++RG E + + D
Sbjct: 75 APICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDV-----------CEGMAYLEEAS 123
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTI---------TSALAPVIARAAGYRAPEVTDS 498
++H ++ + N + Q VSD G+T T PV + +PEV
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-----KWASPEVFSF 178
Query: 499 RKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELV 533
+ + SDV+SFGV++ E+ + GK P E+V
Sbjct: 179 SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV 214
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 112/272 (41%), Gaps = 29/272 (10%)
Query: 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYY 389
E LG G FG + T V VK LK ++ F + ++ ++H+ +V L A
Sbjct: 21 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VV 79
Query: 390 SKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLV 449
+++ ++ +Y GS+ L + G I L T +
Sbjct: 80 TQEPIYIITEYMENGSLVDFLKTPSG---IKL---TINKLLDMAAQIAEGMAFIEERNYI 133
Query: 450 HGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA----GYRAPEVTDSRKATQAS 505
H +++++NI ++ ++D GL + A + APE + T S
Sbjct: 134 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 193
Query: 506 DVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEE 564
DV+SFG++L EI+T G+ P E++ + + +VR + N E
Sbjct: 194 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD--------------NCPE 239
Query: 565 EMVEMLQIAMSCVVRMPDQRPKMPDVVRVIEN 596
E+ +++++ C P+ RP + V+E+
Sbjct: 240 ELYQLMRL---CWKERPEDRPTFDYLRSVLED 268
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 112/272 (41%), Gaps = 29/272 (10%)
Query: 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYY 389
E LG G FG + T V VK LK ++ F + ++ ++H+ +V L A
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VV 77
Query: 390 SKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLV 449
+++ ++ +Y GS+ L + G I L T +
Sbjct: 78 TQEPIYIITEYMENGSLVDFLKTPSG---IKL---TINKLLDMAAQIAEGMAFIEERNYI 131
Query: 450 HGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA----GYRAPEVTDSRKATQAS 505
H +++++NI ++ ++D GL + A + APE + T S
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 506 DVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEE 564
DV+SFG++L EI+T G+ P E++ + + +VR + N E
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD--------------NCPE 237
Query: 565 EMVEMLQIAMSCVVRMPDQRPKMPDVVRVIEN 596
E+ +++++ C P+ RP + V+E+
Sbjct: 238 ELYQLMRL---CWKERPEDRPTFDYLRSVLED 266
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 91/216 (42%), Gaps = 30/216 (13%)
Query: 332 LGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSK 391
+G G FG+ + + V +K +++ + + DF ++ E++ + H +V+L +
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 74
Query: 392 DEKLMVYDYYSLGSVSAMLHSERG----EGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXK 447
+V+++ G +S L ++RG E + + D
Sbjct: 75 APICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC----------- 123
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTI---------TSALAPVIARAAGYRAPEVTDS 498
++H ++ + N + Q VSD G+T T PV + +PEV
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-----KWASPEVFSF 178
Query: 499 RKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELV 533
+ + SDV+SFGV++ E+ + GK P E+V
Sbjct: 179 SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV 214
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 91/216 (42%), Gaps = 30/216 (13%)
Query: 332 LGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSK 391
+G G FG+ + + V +K +++ + + DF ++ E++ + H +V+L +
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 72
Query: 392 DEKLMVYDYYSLGSVSAMLHSERG----EGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXK 447
+V+++ G +S L ++RG E + + D
Sbjct: 73 APICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC----------- 121
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTI---------TSALAPVIARAAGYRAPEVTDS 498
++H ++ + N + Q VSD G+T T PV + +PEV
Sbjct: 122 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-----KWASPEVFSF 176
Query: 499 RKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELV 533
+ + SDV+SFGV++ E+ + GK P E+V
Sbjct: 177 SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV 212
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 91/216 (42%), Gaps = 30/216 (13%)
Query: 332 LGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSK 391
+G G FG+ + + V +K +++ + + DF ++ E++ + H +V+L +
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 77
Query: 392 DEKLMVYDYYSLGSVSAMLHSERG----EGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXK 447
+V+++ G +S L ++RG E + + D
Sbjct: 78 APICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC----------- 126
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTI---------TSALAPVIARAAGYRAPEVTDS 498
++H ++ + N + Q VSD G+T T PV + +PEV
Sbjct: 127 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-----KWASPEVFSF 181
Query: 499 RKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELV 533
+ + SDV+SFGV++ E+ + GK P E+V
Sbjct: 182 SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV 217
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 112/272 (41%), Gaps = 29/272 (10%)
Query: 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYY 389
E LG G FG + T V VK LK ++ F + ++ ++H+ +V L A
Sbjct: 20 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VV 78
Query: 390 SKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLV 449
+++ ++ +Y GS+ L + G I L T +
Sbjct: 79 TQEPIYIITEYMENGSLVDFLKTPSG---IKL---TINKLLDMAAQIAEGMAFIEERNYI 132
Query: 450 HGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA----GYRAPEVTDSRKATQAS 505
H +++++NI ++ ++D GL + A + APE + T S
Sbjct: 133 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 192
Query: 506 DVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEE 564
DV+SFG++L EI+T G+ P E++ + + +VR + N E
Sbjct: 193 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD--------------NCPE 238
Query: 565 EMVEMLQIAMSCVVRMPDQRPKMPDVVRVIEN 596
E+ +++++ C P+ RP + V+E+
Sbjct: 239 ELYQLMRL---CWKERPEDRPTFDYLRSVLED 267
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 112/272 (41%), Gaps = 29/272 (10%)
Query: 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYY 389
E LG G FG + T V VK LK ++ F + ++ ++H+ +V L A
Sbjct: 25 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VV 83
Query: 390 SKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLV 449
+++ ++ +Y GS+ L + G I L T +
Sbjct: 84 TQEPIYIITEYMENGSLVDFLKTPSG---IKL---TINKLLDMAAQIAEGMAFIEERNYI 137
Query: 450 HGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA----GYRAPEVTDSRKATQAS 505
H +++++NI ++ ++D GL + A + APE + T S
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 197
Query: 506 DVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEE 564
DV+SFG++L EI+T G+ P E++ + + +VR + N E
Sbjct: 198 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD--------------NCPE 243
Query: 565 EMVEMLQIAMSCVVRMPDQRPKMPDVVRVIEN 596
E+ +++++ C P+ RP + V+E+
Sbjct: 244 ELYQLMRL---CWKERPEDRPTFDYLRSVLED 272
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 114/293 (38%), Gaps = 40/293 (13%)
Query: 332 LGKGTFGMAYKAILEDGTTVV-VKRLKDVNVGKRDFEQQM----EIVGSIRHENVVELKA 386
LGKG FG Y A + ++ +K L + K E Q+ EI +RH N++ L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLH--SERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXX 444
Y++ ++ +Y G V L S+ E R
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRT----------ATYITELANALSYCH 130
Query: 445 XXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTIT-SALAPVIARAAGYRAPEVTDSRKATQ 503
+++H +IK N+ L S ++D G + S+ + Y PE+ + R +
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXGTLDYLPPEMIEGRMHDE 190
Query: 504 ASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIE 563
D++S GV+ E L GK P E + R E+T F E R
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISRVEFTFPDFVTEGAR----- 239
Query: 564 EEMVEMLQIAMSCVVRMPDQRPKMPDVVR----VIENVRPNDSENRPSSGNKS 612
+++ L + P QRP + +V+ + +P++ +N+ S+ +S
Sbjct: 240 -DLISRL------LKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESASKQS 285
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 114/287 (39%), Gaps = 38/287 (13%)
Query: 332 LGKGTFGMAYKA----ILEDGT--TVVVKRLKD--VNVGKRDFEQQMEIVGSIRHE-NVV 382
LG+G FG +A I + T TV VK LK+ + R +++I+ I H NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 383 ELKAYYYSKDEKLMVY-DYYSLGSVSAMLHSERGEGRIPL-----DWDTXXXXXXXXXXX 436
L LMV ++ G++S L S+R E +P D+ T
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEF-VPYKDLYKDFLTLEHLICYSFQV 153
Query: 437 XXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-----YR 491
K +H ++ + NI L+ + + D GL + + +
Sbjct: 154 AKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWM 213
Query: 492 APEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAE 550
APE R T SDV+SFGV+L EI + G SP D EE+
Sbjct: 214 APETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--------------EEFCRR 259
Query: 551 VFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
+ + +R P+ EM Q + C P QRP ++V + N+
Sbjct: 260 LKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNL 304
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 112/272 (41%), Gaps = 29/272 (10%)
Query: 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYY 389
E LG G FG + T V VK LK ++ F + ++ ++H+ +V L A
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VV 77
Query: 390 SKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLV 449
+++ ++ +Y GS+ L + G I L T +
Sbjct: 78 TQEPIYIITEYMENGSLVDFLKTPSG---IKL---TINKLLDMAAQIAEGMAFIEERNYI 131
Query: 450 HGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA----GYRAPEVTDSRKATQAS 505
H +++++NI ++ ++D GL + A + APE + T S
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 506 DVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEE 564
DV+SFG++L EI+T G+ P E++ + + +VR + N E
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD--------------NCPE 237
Query: 565 EMVEMLQIAMSCVVRMPDQRPKMPDVVRVIEN 596
E+ +++++ C P+ RP + V+E+
Sbjct: 238 ELYQLMRL---CWKERPEDRPTFDYLRSVLED 266
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 112/272 (41%), Gaps = 29/272 (10%)
Query: 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYY 389
E LG G FG + T V VK LK ++ F + ++ ++H+ +V L A
Sbjct: 24 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VV 82
Query: 390 SKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLV 449
+++ ++ +Y GS+ L + G I L T +
Sbjct: 83 TQEPIYIITEYMENGSLVDFLKTPSG---IKL---TINKLLDMAAQIAEGMAFIEERNYI 136
Query: 450 HGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA----GYRAPEVTDSRKATQAS 505
H +++++NI ++ ++D GL + A + APE + T S
Sbjct: 137 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 196
Query: 506 DVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEE 564
DV+SFG++L EI+T G+ P E++ + + +VR + N E
Sbjct: 197 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD--------------NCPE 242
Query: 565 EMVEMLQIAMSCVVRMPDQRPKMPDVVRVIEN 596
E+ +++++ C P+ RP + V+E+
Sbjct: 243 ELYQLMRL---CWKERPEDRPTFDYLRSVLED 271
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 83/208 (39%), Gaps = 18/208 (8%)
Query: 332 LGKGTFGMAYKAILEDGTTVV-VKRLKDVNVGKRDFEQQM----EIVGSIRHENVVELKA 386
LGKG FG Y A + ++ +K L + K E Q+ EI +RH N++ L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLH--SERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXX 444
Y++ ++ +Y LG+V L S+ E R
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT----------ATYITELANALSYCH 128
Query: 445 XXKLVHGNIKSSNIFLNSQQYGCVSDLGLTT-ITSALAPVIARAAGYRAPEVTDSRKATQ 503
+++H +IK N+ L S +++ G + S+ + Y PE+ + R +
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE 188
Query: 504 ASDVYSFGVVLLEILTGKSPIHTTGGDE 531
D++S GV+ E L GK P E
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEANTYQE 216
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 112/272 (41%), Gaps = 29/272 (10%)
Query: 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYY 389
E LG G FG + T V VK LK ++ F + ++ ++H+ +V L A
Sbjct: 29 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VV 87
Query: 390 SKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLV 449
+++ ++ +Y GS+ L + G I L T +
Sbjct: 88 TQEPIYIITEYMENGSLVDFLKTPSG---IKL---TINKLLDMAAQIAEGMAFIEERNYI 141
Query: 450 HGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA----GYRAPEVTDSRKATQAS 505
H +++++NI ++ ++D GL + A + APE + T S
Sbjct: 142 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 201
Query: 506 DVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEE 564
DV+SFG++L EI+T G+ P E++ + + +VR + N E
Sbjct: 202 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD--------------NCPE 247
Query: 565 EMVEMLQIAMSCVVRMPDQRPKMPDVVRVIEN 596
E+ +++++ C P+ RP + V+E+
Sbjct: 248 ELYQLMRL---CWKERPEDRPTFDYLRSVLED 276
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 112/272 (41%), Gaps = 29/272 (10%)
Query: 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYY 389
E LG G FG + T V VK LK ++ F + ++ ++H+ +V L A
Sbjct: 25 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VV 83
Query: 390 SKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLV 449
+++ ++ +Y GS+ L + G I L T +
Sbjct: 84 TQEPIYIITEYMENGSLVDFLKTPSG---IKL---TINKLLDMAAQIAEGMAFIEERNYI 137
Query: 450 HGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA----GYRAPEVTDSRKATQAS 505
H +++++NI ++ ++D GL + A + APE + T S
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 197
Query: 506 DVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEE 564
DV+SFG++L EI+T G+ P E++ + + +VR + N E
Sbjct: 198 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD--------------NCPE 243
Query: 565 EMVEMLQIAMSCVVRMPDQRPKMPDVVRVIEN 596
E+ +++++ C P+ RP + V+E+
Sbjct: 244 ELYQLMRL---CWKERPEDRPTFDYLRSVLED 272
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 112/272 (41%), Gaps = 29/272 (10%)
Query: 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYY 389
E LG G FG + T V VK LK ++ F + ++ ++H+ +V L A
Sbjct: 14 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VV 72
Query: 390 SKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLV 449
+++ ++ +Y GS+ L + G I L T +
Sbjct: 73 TQEPIYIITEYMENGSLVDFLKTPSG---IKL---TINKLLDMAAQIAEGMAFIEERNYI 126
Query: 450 HGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGY----RAPEVTDSRKATQAS 505
H +++++NI ++ ++D GL + A + APE + T S
Sbjct: 127 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 186
Query: 506 DVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEE 564
DV+SFG++L EI+T G+ P E++ + + +VR + N E
Sbjct: 187 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD--------------NCPE 232
Query: 565 EMVEMLQIAMSCVVRMPDQRPKMPDVVRVIEN 596
E+ +++++ C P+ RP + V+E+
Sbjct: 233 ELYQLMRL---CWKERPEDRPTFDYLRSVLED 261
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 87/198 (43%), Gaps = 14/198 (7%)
Query: 330 EVLGKGTFGMAYKAILED--GTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAY 387
+ +GKG FG +L D G V VK +K+ + + F + ++ +RH N+V+L
Sbjct: 12 QTIGKGEFG---DVMLGDYRGNKVAVKCIKN-DATAQAFLAEASVMTQLRHSNLVQLLGV 67
Query: 388 YYSKDEKL-MVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXX 446
+ L +V +Y + GS+ L R GR L D
Sbjct: 68 IVEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYLEGN--- 121
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASD 506
VH ++ + N+ ++ VSD GLT S+ + APE +K + SD
Sbjct: 122 NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSD 181
Query: 507 VYSFGVVLLEILT-GKSP 523
V+SFG++L EI + G+ P
Sbjct: 182 VWSFGILLWEIYSFGRVP 199
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 119/300 (39%), Gaps = 43/300 (14%)
Query: 332 LGKGTFGMAYKA----ILEDGT--TVVVKRLKD--VNVGKRDFEQQMEIVGSIRHE-NVV 382
LG+G FG +A I + T TV VK LK+ + R +++I+ I H NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 383 ELKAYYYSKDEKLMVY-DYYSLGSVSAMLHSERGEGRIPL---------DWDTXXXXXXX 432
L LMV ++ G++S L S+R E +P D+ T
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEF-VPYKVAPEDLYKDFLTLEHLICY 144
Query: 433 XXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG--- 489
K +H ++ + NI L+ + + D GL + +
Sbjct: 145 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 204
Query: 490 --YRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREE 546
+ APE R T SDV+SFGV+L EI + G SP D EE
Sbjct: 205 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--------------EE 250
Query: 547 WTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIEN-VRPNDSENR 605
+ + + +R P+ EM Q + C P QRP ++V + N ++ N ++R
Sbjct: 251 FCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQDR 308
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 119/300 (39%), Gaps = 43/300 (14%)
Query: 332 LGKGTFGMAYKA----ILEDGT--TVVVKRLKD--VNVGKRDFEQQMEIVGSIRHE-NVV 382
LG+G FG +A I + T TV VK LK+ + R +++I+ I H NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 383 ELKAYYYSKDEKLMVY-DYYSLGSVSAMLHSERGEGRIPL---------DWDTXXXXXXX 432
L LMV ++ G++S L S+R E +P D+ T
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEF-VPYKVAPEDLYKDFLTLEHLICY 144
Query: 433 XXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG--- 489
K +H ++ + NI L+ + + D GL + +
Sbjct: 145 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 204
Query: 490 --YRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREE 546
+ APE R T SDV+SFGV+L EI + G SP D EE
Sbjct: 205 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--------------EE 250
Query: 547 WTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIEN-VRPNDSENR 605
+ + + +R P+ EM Q + C P QRP ++V + N ++ N ++R
Sbjct: 251 FCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQDR 308
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 99/223 (44%), Gaps = 18/223 (8%)
Query: 305 ASNRLFFFEGCNYAFDLEDLLRASAEVLGKGTFGMAYKAILED--GTTVVVKRLKDVNVG 362
A+ F+ G +A ++++L + +GKG FG +L D G V VK +K+ +
Sbjct: 178 AAQDEFYRSG--WALNMKEL--KLLQTIGKGEFG---DVMLGDYRGNKVAVKCIKN-DAT 229
Query: 363 KRDFEQQMEIVGSIRHENVVELKAYYYSKDEKL-MVYDYYSLGSVSAMLHSERGEGRIPL 421
+ F + ++ +RH N+V+L + L +V +Y + GS+ L R GR L
Sbjct: 230 AQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVL 286
Query: 422 DWDTXXXXXXXXXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALA 481
D VH ++ + N+ ++ VSD GLT S+
Sbjct: 287 GGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ 343
Query: 482 PVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSP 523
+ APE +K + SDV+SFG++L EI + G+ P
Sbjct: 344 DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 386
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 115/289 (39%), Gaps = 40/289 (13%)
Query: 332 LGKGTFGMAYKA----ILEDGT--TVVVKRLKD--VNVGKRDFEQQMEIVGSIRHE-NVV 382
LG+G FG +A I + T TV VK LK+ + R +++I+ I H NVV
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 383 ELKAYYYSKDEKLMVY-DYYSLGSVSAMLHSERGEGRIPL-------DWDTXXXXXXXXX 434
L LMV ++ G++S L S+R E +P D+ T
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEF-VPYKPEDLYKDFLTLEHLIXYSF 155
Query: 435 XXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG----- 489
K +H ++ + NI L+ + + D GL + +
Sbjct: 156 QVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK 215
Query: 490 YRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWT 548
+ APE R T SDV+SFGV+L EI + G SP D EE+
Sbjct: 216 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--------------EEFC 261
Query: 549 AEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
+ + +R P+ EM Q + C P QRP ++V + N+
Sbjct: 262 RRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 115/287 (40%), Gaps = 38/287 (13%)
Query: 332 LGKGTFGMAYKA----ILEDGT--TVVVKRLKD--VNVGKRDFEQQMEIVGSIRHE-NVV 382
LG+G FG +A I + T TV VK LK+ + R +++I+ I H NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 383 ELKAYYYSKDEKLMVY-DYYSLGSVSAMLHSERGEGRIPL-----DWDTXXXXXXXXXXX 436
L LMV ++ G++S L S+R E +P D+ T
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEF-VPYKDLYKDFLTLEHLIXYSFQV 153
Query: 437 XXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-----YR 491
K +H ++ + NI L+ + + D GL + + +
Sbjct: 154 AKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWM 213
Query: 492 APEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAE 550
APE R T SDV+SFGV+L EI + G SP D EE+
Sbjct: 214 APETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--------------EEFXRR 259
Query: 551 VFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
+ + +R P+ EM Q + C P QRP ++V + N+
Sbjct: 260 LKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNL 304
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 114/290 (39%), Gaps = 41/290 (14%)
Query: 332 LGKGTFGMAYKA----ILEDGT--TVVVKRLKD--VNVGKRDFEQQMEIVGSIRHE-NVV 382
LG+G FG +A I + T TV VK LK+ + R +++I+ I H NVV
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 383 ELKAYYYSKDEKLMVY-DYYSLGSVSAMLHSERGEGRIPL--------DWDTXXXXXXXX 433
L LMV ++ G++S L S+R E +P D+ T
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEF-VPYKTPEDLYKDFLTLEHLICYS 154
Query: 434 XXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG---- 489
K +H ++ + NI L+ + + D GL + +
Sbjct: 155 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 214
Query: 490 -YRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEW 547
+ APE R T SDV+SFGV+L EI + G SP D EE+
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--------------EEF 260
Query: 548 TAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
+ + +R P+ EM Q + C P QRP ++V + N+
Sbjct: 261 CRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 119/300 (39%), Gaps = 43/300 (14%)
Query: 332 LGKGTFGMAYKA----ILEDGT--TVVVKRLKD--VNVGKRDFEQQMEIVGSIRHE-NVV 382
LG+G FG +A I + T TV VK LK+ + R +++I+ I H NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 383 ELKAYYYSKDEKLMVY-DYYSLGSVSAMLHSERGEGRIPL---------DWDTXXXXXXX 432
L LMV ++ G++S L S+R E +P D+ T
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEF-VPYKVAPEDLYKDFLTLEHLICY 144
Query: 433 XXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG--- 489
K +H ++ + NI L+ + + D GL + +
Sbjct: 145 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 204
Query: 490 --YRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREE 546
+ APE R T SDV+SFGV+L EI + G SP D EE
Sbjct: 205 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--------------EE 250
Query: 547 WTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIEN-VRPNDSENR 605
+ + + +R P+ EM Q + C P QRP ++V + N ++ N ++R
Sbjct: 251 FCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQDR 308
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 95/216 (43%), Gaps = 16/216 (7%)
Query: 312 FEGCNYAFDLEDLLRASAEVLGKGTFGMAYKAILED--GTTVVVKRLKDVNVGKRDFEQQ 369
F +A ++++L + +GKG FG +L D G V VK +K+ + + F +
Sbjct: 11 FYRSGWALNMKEL--KLLQTIGKGEFG---DVMLGDYRGNKVAVKCIKN-DATAQAFLAE 64
Query: 370 MEIVGSIRHENVVELKAYYYSKDEKL-MVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXX 428
++ +RH N+V+L + L +V +Y + GS+ L R GR L D
Sbjct: 65 ASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLK 121
Query: 429 XXXXXXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA 488
VH ++ + N+ ++ VSD GLT S+
Sbjct: 122 FSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV 178
Query: 489 GYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSP 523
+ APE +K + SDV+SFG++L EI + G+ P
Sbjct: 179 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 214
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGL---TTITSALAPVIARAAGYRAPEVTDSRKATQA 504
+V+ ++K NI L+ + ++D G+ + A Y APE+ +K +
Sbjct: 139 IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQKYNHS 198
Query: 505 SDVYSFGVVLLEILTGKSPIHTTGGDELVHLVR 537
D +SFGV+L E+L G+SP H +EL H +R
Sbjct: 199 VDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIR 231
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 119/300 (39%), Gaps = 43/300 (14%)
Query: 332 LGKGTFGMAYKA----ILEDGT--TVVVKRLKD--VNVGKRDFEQQMEIVGSIRHE-NVV 382
LG+G FG +A I + T TV VK LK+ + R +++I+ I H NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 383 ELKAYYYSKDEKLMVY-DYYSLGSVSAMLHSERGEGRIPL---------DWDTXXXXXXX 432
L LMV ++ G++S L S+R E +P D+ T
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEF-VPYKVAPEDLYKDFLTLEHLICY 144
Query: 433 XXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG--- 489
K +H ++ + NI L+ + + D GL + +
Sbjct: 145 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 204
Query: 490 --YRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREE 546
+ APE R T SDV+SFGV+L EI + G SP D EE
Sbjct: 205 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--------------EE 250
Query: 547 WTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIEN-VRPNDSENR 605
+ + + +R P+ EM Q + C P QRP ++V + N ++ N ++R
Sbjct: 251 FCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQDR 308
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 114/291 (39%), Gaps = 42/291 (14%)
Query: 332 LGKGTFGMAYKA----ILEDGT--TVVVKRLKD--VNVGKRDFEQQMEIVGSIRHE-NVV 382
LG+G FG +A I + T TV VK LK+ + R +++I+ I H NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 383 ELKAYYYSKDEKLMVY-DYYSLGSVSAMLHSERGEGRIPL---------DWDTXXXXXXX 432
L LMV ++ G++S L S+R E +P D+ T
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEF-VPYKVAPEDLYKDFLTLEHLICY 153
Query: 433 XXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG--- 489
K +H ++ + NI L+ + + D GL + +
Sbjct: 154 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 490 --YRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREE 546
+ APE R T SDV+SFGV+L EI + G SP D EE
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--------------EE 259
Query: 547 WTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
+ + + +R P+ EM Q + C P QRP ++V + N+
Sbjct: 260 FCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 82/217 (37%), Gaps = 16/217 (7%)
Query: 314 GCNYAFDLEDLLRASAEVLGKGTFGMAYKAILEDGTTVV-VKRLKDVNVGKRDFEQQM-- 370
G + LED LGKG FG Y A ++ +K L + K E Q+
Sbjct: 4 GSKRQWTLEDF--DIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRR 61
Query: 371 --EIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXX 428
EI +RH N++ L Y++ ++ +Y LG+V L L
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK--------LSRFDEQR 113
Query: 429 XXXXXXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTIT-SALAPVIARA 487
+++H +IK N+ L S ++D G + S+ +
Sbjct: 114 TATYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLCGT 173
Query: 488 AGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPI 524
Y PE+ + R + D++S GV+ E L G P
Sbjct: 174 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPF 210
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGL---TTITSALAPVIARAAGYRAPEVTDSRKATQA 504
+V+ ++K NI L+ + ++D G+ + A Y APE+ +K +
Sbjct: 140 IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQKYNHS 199
Query: 505 SDVYSFGVVLLEILTGKSPIHTTGGDELVHLVR 537
D +SFGV+L E+L G+SP H +EL H +R
Sbjct: 200 VDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIR 232
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 82/217 (37%), Gaps = 16/217 (7%)
Query: 314 GCNYAFDLEDLLRASAEVLGKGTFGMAYKAILEDGTTVV-VKRLKDVNVGKRDFEQQM-- 370
G + LED LGKG FG Y A ++ +K L + K E Q+
Sbjct: 4 GSKRQWTLEDF--DIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRR 61
Query: 371 --EIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXX 428
EI +RH N++ L Y++ ++ +Y LG+V L L
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK--------LSRFDEQR 113
Query: 429 XXXXXXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTIT-SALAPVIARA 487
+++H +IK N+ L S ++D G + S+ +
Sbjct: 114 TATYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLCGT 173
Query: 488 AGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPI 524
Y PE+ + R + D++S GV+ E L G P
Sbjct: 174 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPF 210
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 119/284 (41%), Gaps = 41/284 (14%)
Query: 329 AEVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGK------RDFEQQMEIVGSIRHENVV 382
+ +G G+FG YK V K +NV + F+ ++ ++ RH N++
Sbjct: 29 GQRIGSGSFGTVYKGKWHGDVAV-----KMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 83
Query: 383 ELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXX 442
L Y +K + +V + S+ LH+ + + D
Sbjct: 84 -LFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS-- 140
Query: 443 XXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALA-----PVIARAAGYRAPEV-- 495
++H ++KS+NIFL+ + D GL T S + ++ + + APEV
Sbjct: 141 -----IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 195
Query: 496 -TDSRKATQASDVYSFGVVLLEILTGKSPIHTTGG-DELVHLVRWVHSVVREEWTAEVFD 553
DS + SDVY+FG+VL E++TG+ P D+++ +V R + ++
Sbjct: 196 MQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVG------RGSLSPDLSK 249
Query: 554 VELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
V N + M ++ C+ + D+RP P ++ IE +
Sbjct: 250 VR----SNCPKRMKRLM---AECLKKKRDERPSFPRILAEIEEL 286
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 101/224 (45%), Gaps = 25/224 (11%)
Query: 332 LGKGTFGMAYKA-ILEDGTTVVVKRL--------KDVNVGKRDFEQQMEIVGSIRHENVV 382
+GKG FG+ +K +++D + V +K L ++ ++F++++ I+ ++ H N+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 383 ELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXX 442
+L Y + MV ++ G + L + P+ W +
Sbjct: 87 KL--YGLMHNPPRMVMEFVPCGDLYHRLLDKAH----PIKW-SVKLRLMLDIALGIEYMQ 139
Query: 443 XXXXKLVHGNIKSSNIFLNSQQYGC-----VSDLGLTTITSALAPVIARAAGYRAPEV-- 495
+VH +++S NIFL S V+D GL+ + + + APE
Sbjct: 140 NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMAPETIG 199
Query: 496 TDSRKATQASDVYSFGVVLLEILTGKSPI--HTTGGDELVHLVR 537
+ T+ +D YSF ++L ILTG+ P ++ G + ++++R
Sbjct: 200 AEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIR 243
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 114/291 (39%), Gaps = 42/291 (14%)
Query: 332 LGKGTFGMAYKA----ILEDGT--TVVVKRLKD--VNVGKRDFEQQMEIVGSIRHE-NVV 382
LG+G FG +A I + T TV VK LK+ + R +++I+ I H NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 383 ELKAYYYSKDEKLMVY-DYYSLGSVSAMLHSERGEGRIPL---------DWDTXXXXXXX 432
L LMV ++ G++S L S+R E +P D+ T
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEF-VPYKVAPEDLYKDFLTLEHLICY 153
Query: 433 XXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG--- 489
K +H ++ + NI L+ + + D GL + +
Sbjct: 154 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLP 213
Query: 490 --YRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREE 546
+ APE R T SDV+SFGV+L EI + G SP D EE
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--------------EE 259
Query: 547 WTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
+ + + +R P+ EM Q + C P QRP ++V + N+
Sbjct: 260 FCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 113/273 (41%), Gaps = 31/273 (11%)
Query: 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYY 389
E LG G G + T V VK LK ++ F + ++ ++H+ +V L A
Sbjct: 19 ERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV- 77
Query: 390 SKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLV 449
+++ ++ +Y GS+ L + G I L T +
Sbjct: 78 TQEPIYIITEYMENGSLVDFLKTPSG---IKL---TINKLLDMAAQIAEGMAFIEERNYI 131
Query: 450 HGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-----YRAPEVTDSRKATQA 504
H +++++NI ++ ++D GL + A AR + APE + T
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIED-AEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 505 SDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIE 563
SDV+SFG++L EI+T G+ P E++ + + +VR + N
Sbjct: 191 SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD--------------NCP 236
Query: 564 EEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIEN 596
EE+ +++++ C P+ RP + V+E+
Sbjct: 237 EELYQLMRL---CWKERPEDRPTFDYLRSVLED 266
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 114/291 (39%), Gaps = 42/291 (14%)
Query: 332 LGKGTFGMAYKA----ILEDGT--TVVVKRLKD--VNVGKRDFEQQMEIVGSIRHE-NVV 382
LG+G FG +A I + T TV VK LK+ + R +++I+ I H NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 383 ELKAYYYSKDEKLMVY-DYYSLGSVSAMLHSERGEGRIPL---------DWDTXXXXXXX 432
L LMV ++ G++S L S+R E +P D+ T
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEF-VPYKVAPEDLYKDFLTLEHLICY 153
Query: 433 XXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG--- 489
K +H ++ + NI L+ + + D GL + +
Sbjct: 154 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 213
Query: 490 --YRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREE 546
+ APE R T SDV+SFGV+L EI + G SP D EE
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--------------EE 259
Query: 547 WTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
+ + + +R P+ EM Q + C P QRP ++V + N+
Sbjct: 260 FCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 114/291 (39%), Gaps = 42/291 (14%)
Query: 332 LGKGTFGMAYKA----ILEDGT--TVVVKRLKD--VNVGKRDFEQQMEIVGSIRHE-NVV 382
LG+G FG +A I + T TV VK LK+ + R +++I+ I H NVV
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 383 ELKAYYYSKDEKLMVY-DYYSLGSVSAMLHSERGEGRIPL---------DWDTXXXXXXX 432
L LMV ++ G++S L S+R E +P D+ T
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEF-VPYKEAPEDLYKDFLTLEHLICY 155
Query: 433 XXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG--- 489
K +H ++ + NI L+ + + D GL + +
Sbjct: 156 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 215
Query: 490 --YRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREE 546
+ APE R T SDV+SFGV+L EI + G SP D EE
Sbjct: 216 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--------------EE 261
Query: 547 WTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
+ + + +R P+ EM Q + C P QRP ++V + N+
Sbjct: 262 FCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNL 310
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 114/291 (39%), Gaps = 42/291 (14%)
Query: 332 LGKGTFGMAYKA----ILEDGT--TVVVKRLKD--VNVGKRDFEQQMEIVGSIRHE-NVV 382
LG+G FG +A I + T TV VK LK+ + R +++I+ I H NVV
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 383 ELKAYYYSKDEKLMVY-DYYSLGSVSAMLHSERGEGRIPL---------DWDTXXXXXXX 432
L LMV ++ G++S L S+R E +P D+ T
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEF-VPYKVAPEDLYKDFLTLEHLICY 190
Query: 433 XXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG--- 489
K +H ++ + NI L+ + + D GL + +
Sbjct: 191 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 250
Query: 490 --YRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREE 546
+ APE R T SDV+SFGV+L EI + G SP D EE
Sbjct: 251 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--------------EE 296
Query: 547 WTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
+ + + +R P+ EM Q + C P QRP ++V + N+
Sbjct: 297 FCRRLKEGTRMRAPDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNL 345
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 90/216 (41%), Gaps = 30/216 (13%)
Query: 332 LGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSK 391
+G G FG+ + + V +K +++ + + DF ++ E++ + H +V+L +
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 75
Query: 392 DEKLMVYDYYSLGSVSAMLHSERG----EGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXK 447
+V ++ G +S L ++RG E + + D
Sbjct: 76 APICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC----------- 124
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTI---------TSALAPVIARAAGYRAPEVTDS 498
++H ++ + N + Q VSD G+T T PV + +PEV
Sbjct: 125 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-----KWASPEVFSF 179
Query: 499 RKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELV 533
+ + SDV+SFGV++ E+ + GK P E+V
Sbjct: 180 SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV 215
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 112/309 (36%), Gaps = 49/309 (15%)
Query: 307 NRLFFFEGCNYAFDLEDLLRASAEVLGKGTFGMAYKAIL------EDGTTVVVKRLKDVN 360
N +F + C + D++ LG+G FG + A +D V VK LK+ +
Sbjct: 26 NPQYFSDACVHHIKRRDIVLKWE--LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS 83
Query: 361 VGKR-DFEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRI 419
R DF+++ E++ ++H+++V LMV++Y G ++ L S + ++
Sbjct: 84 ESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKL 143
Query: 420 ----------PLDWDTXXXXXXXXXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVS 469
PL VH ++ + N + +
Sbjct: 144 LAGGEDVAPGPLG---LGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIG 200
Query: 470 DLGLTTITSALAPVIARAAG-------YRAPEVTDSRKATQASDVYSFGVVLLEILT-GK 521
D G++ + R G + PE RK T SDV+SFGVVL EI T GK
Sbjct: 201 DFGMS--RDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGK 258
Query: 522 SPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMP 581
P + E + + + R E+ I C R P
Sbjct: 259 QPWYQLSNTEAIDCITQGRELERPRACPP-----------------EVYAIMRGCWQREP 301
Query: 582 DQRPKMPDV 590
QR + DV
Sbjct: 302 QQRHSIKDV 310
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 116/284 (40%), Gaps = 41/284 (14%)
Query: 329 AEVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGK------RDFEQQMEIVGSIRHENVV 382
+ +G G+FG YK V K +NV + F+ ++ ++ RH N++
Sbjct: 29 GQRIGSGSFGTVYKGKWHGDVAV-----KMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 83
Query: 383 ELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXX 442
Y S +L + + GS S H E + +
Sbjct: 84 LFMGY--STAPQLAIVTQWCEGS-SLYHHLHASETKFEM-----KKLIDIARQTARGMDY 135
Query: 443 XXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALA-----PVIARAAGYRAPEV-- 495
++H ++KS+NIFL+ + D GL T S + ++ + + APEV
Sbjct: 136 LHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 195
Query: 496 -TDSRKATQASDVYSFGVVLLEILTGKSPIHTTGG-DELVHLVRWVHSVVREEWTAEVFD 553
DS + SDVY+FG+VL E++TG+ P D+++ +V R + ++
Sbjct: 196 MQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVG------RGSLSPDLSK 249
Query: 554 VELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
V N + M ++ C+ + D+RP P ++ IE +
Sbjct: 250 VR----SNCPKRMKRLM---AECLKKKRDERPSFPRILAEIEEL 286
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 93/214 (43%), Gaps = 16/214 (7%)
Query: 314 GCNYAFDLEDLLRASAEVLGKGTFGMAYKAILED--GTTVVVKRLKDVNVGKRDFEQQME 371
G +A ++++L + +GKG FG +L D G V VK +K+ + + F +
Sbjct: 4 GSGWALNMKEL--KLLQTIGKGEFG---DVMLGDYRGNKVAVKCIKN-DATAQAFLAEAS 57
Query: 372 IVGSIRHENVVELKAYYYSKDEKL-MVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXX 430
++ +RH N+V+L + L +V +Y + GS+ L R GR L D
Sbjct: 58 VMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFS 114
Query: 431 XXXXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGY 490
VH ++ + N+ ++ VSD GLT S+ +
Sbjct: 115 LDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKW 171
Query: 491 RAPEVTDSRKATQASDVYSFGVVLLEILT-GKSP 523
APE + SDV+SFG++L EI + G+ P
Sbjct: 172 TAPEALREAAFSTKSDVWSFGILLWEIYSFGRVP 205
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 103/240 (42%), Gaps = 12/240 (5%)
Query: 332 LGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSK 391
LG G FG + + T V VK LK + + F ++ ++ +++H+ +V L A +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKE 79
Query: 392 DEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVHG 451
+ ++ ++ + GS+ L S+ G G++ L +H
Sbjct: 80 EPIYIITEFMAKGSLLDFLKSDEG-GKVLLP-----KLIDFSAQIAEGMAYIERKNYIHR 133
Query: 452 NIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGY----RAPEVTDSRKATQASDV 507
+++++N+ ++ ++D GL + A + APE + T S+V
Sbjct: 134 DLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNV 193
Query: 508 YSFGVVLLEILT-GKSPI-HTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEEE 565
+SFG++L EI+T GK P T D + L + E E++D+ + + EE
Sbjct: 194 WSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPRMENCPDELYDIMKMCWKEKAEE 253
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 105/279 (37%), Gaps = 37/279 (13%)
Query: 330 EVLGKGTFG-MAYKAILEDGTTVVVKRLKDVNVG-----KRDFEQQMEIVGSIRHENVVE 383
+++G G G + Y + G V +K + G +RDF + I+G H N++
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXX 443
L+ ++V +Y GS+ L + G+ T
Sbjct: 115 LEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQF-------TIMQLVGMLRGVGAGMRYL 167
Query: 444 XXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG------YRAPEVTD 497
VH ++ + N+ ++S VSD GL+ + G + APE
Sbjct: 168 SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIA 227
Query: 498 SRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVEL 556
R + ASDV+SFGVV+ E+L G+ P +++ V E
Sbjct: 228 FRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVE-----------------EG 270
Query: 557 LRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIE 595
R P + Q+ + C + QRP+ +V V++
Sbjct: 271 YRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLD 309
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 105/279 (37%), Gaps = 37/279 (13%)
Query: 330 EVLGKGTFG-MAYKAILEDGTTVVVKRLKDVNVG-----KRDFEQQMEIVGSIRHENVVE 383
+++G G G + Y + G V +K + G +RDF + I+G H N++
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXX 443
L+ ++V +Y GS+ L + G+ T
Sbjct: 115 LEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQF-------TIMQLVGMLRGVGAGMRYL 167
Query: 444 XXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG------YRAPEVTD 497
VH ++ + N+ ++S VSD GL+ + G + APE
Sbjct: 168 SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIA 227
Query: 498 SRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVEL 556
R + ASDV+SFGVV+ E+L G+ P +++ V E
Sbjct: 228 FRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVE-----------------EG 270
Query: 557 LRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIE 595
R P + Q+ + C + QRP+ +V V++
Sbjct: 271 YRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLD 309
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 90/230 (39%), Gaps = 30/230 (13%)
Query: 332 LGKGTFGMAYKAIL------EDGTTVVVKRLKDVNVGKR-DFEQQMEIVGSIRHENVVEL 384
LG+G FG + A +D V VK LK+ + R DF+++ E++ ++H+++V
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 385 KAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRI----------PLDWDTXXXXXXXXX 434
LMV++Y G ++ L S + ++ PL
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLG---LGQLLAVAS 142
Query: 435 XXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG----- 489
VH ++ + N + + D G++ + R G
Sbjct: 143 QVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMS--RDIYSTDYYRVGGRTMLP 200
Query: 490 --YRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLV 536
+ PE RK T SDV+SFGVVL EI T GK P + E + +
Sbjct: 201 IRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCI 250
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 90/230 (39%), Gaps = 30/230 (13%)
Query: 332 LGKGTFGMAYKAIL------EDGTTVVVKRLKDVNVGKR-DFEQQMEIVGSIRHENVVEL 384
LG+G FG + A +D V VK LK+ + R DF+++ E++ ++H+++V
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 385 KAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRI----------PLDWDTXXXXXXXXX 434
LMV++Y G ++ L S + ++ PL
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLG---LGQLLAVAS 136
Query: 435 XXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG----- 489
VH ++ + N + + D G++ + R G
Sbjct: 137 QVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMS--RDIYSTDYYRVGGRTMLP 194
Query: 490 --YRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLV 536
+ PE RK T SDV+SFGVVL EI T GK P + E + +
Sbjct: 195 IRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCI 244
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 100/224 (44%), Gaps = 25/224 (11%)
Query: 332 LGKGTFGMAYKA-ILEDGTTVVVKRL--------KDVNVGKRDFEQQMEIVGSIRHENVV 382
+GKG FG+ +K +++D + V +K L ++ ++F++++ I+ ++ H N+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 383 ELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXX 442
+L Y + MV ++ G + L + P+ W +
Sbjct: 87 KL--YGLMHNPPRMVMEFVPCGDLYHRLLDKAH----PIKW-SVKLRLMLDIALGIEYMQ 139
Query: 443 XXXXKLVHGNIKSSNIFLNSQQYGC-----VSDLGLTTITSALAPVIARAAGYRAPEV-- 495
+VH +++S NIFL S V+D G + + + + APE
Sbjct: 140 NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLLGNFQWMAPETIG 199
Query: 496 TDSRKATQASDVYSFGVVLLEILTGKSPI--HTTGGDELVHLVR 537
+ T+ +D YSF ++L ILTG+ P ++ G + ++++R
Sbjct: 200 AEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIR 243
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 100/224 (44%), Gaps = 25/224 (11%)
Query: 332 LGKGTFGMAYKA-ILEDGTTVVVKRL--------KDVNVGKRDFEQQMEIVGSIRHENVV 382
+GKG FG+ +K +++D + V +K L ++ ++F++++ I+ ++ H N+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 383 ELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXX 442
+L Y + MV ++ G + L + P+ W +
Sbjct: 87 KL--YGLMHNPPRMVMEFVPCGDLYHRLLDKAH----PIKW-SVKLRLMLDIALGIEYMQ 139
Query: 443 XXXXKLVHGNIKSSNIFLNSQQYGC-----VSDLGLTTITSALAPVIARAAGYRAPEV-- 495
+VH +++S NIFL S V+D L+ + + + APE
Sbjct: 140 NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGLLGNFQWMAPETIG 199
Query: 496 TDSRKATQASDVYSFGVVLLEILTGKSPI--HTTGGDELVHLVR 537
+ T+ +D YSF ++L ILTG+ P ++ G + ++++R
Sbjct: 200 AEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIR 243
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 92/217 (42%), Gaps = 18/217 (8%)
Query: 330 EVLGKGTFGMAYKAILEDGTTV----VVKRLKDVNVGKRD---FEQQMEIVGSIRHENVV 382
+VLG+G+FG + G+ +K LK + RD + + +I+ + H +V
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 383 ELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXX 442
+L + ++ + ++ D+ G + L E T
Sbjct: 90 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV--------MFTEEDVKFYLAELALALDH 141
Query: 443 XXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTIT---SALAPVIARAAGYRAPEVTDSR 499
+++ ++K NI L+ + + ++D GL+ + A Y APEV + R
Sbjct: 142 LHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRR 201
Query: 500 KATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLV 536
TQ++D +SFGV++ E+LTG P E + ++
Sbjct: 202 GHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMI 238
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 115/282 (40%), Gaps = 41/282 (14%)
Query: 329 AEVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGK------RDFEQQMEIVGSIRHENVV 382
+ +G G+FG YK V K +NV + F+ ++ ++ RH N++
Sbjct: 13 GQRIGSGSFGTVYKGKWHGDVAV-----KMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 383 ELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXX 442
Y S +L + + GS S H E + +
Sbjct: 68 LFMGY--STKPQLAIVTQWCEGS-SLYHHLHIIETKFEM-----IKLIDIARQTAQGMDY 119
Query: 443 XXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALA-----PVIARAAGYRAPEV-- 495
++H ++KS+NIFL+ + D GL T+ S + ++ + + APEV
Sbjct: 120 LHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 496 -TDSRKATQASDVYSFGVVLLEILTGKSPIHTTGG-DELVHLVRWVHSVVREEWTAEVFD 553
D + SDVY+FG+VL E++TG+ P D+++ +V R + ++
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG------RGYLSPDLSK 233
Query: 554 VELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIE 595
V N + M ++ C+ + D+RP P ++ IE
Sbjct: 234 VR----SNCPKAMKRLM---AECLKKKRDERPLFPQILASIE 268
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 115/282 (40%), Gaps = 41/282 (14%)
Query: 329 AEVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGK------RDFEQQMEIVGSIRHENVV 382
+ +G G+FG YK V K +NV + F+ ++ ++ RH N++
Sbjct: 18 GQRIGSGSFGTVYKGKWHGDVAV-----KMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 72
Query: 383 ELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXX 442
Y S +L + + GS S H E + +
Sbjct: 73 LFMGY--STKPQLAIVTQWCEGS-SLYHHLHIIETKFEM-----IKLIDIARQTAQGMDY 124
Query: 443 XXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALA-----PVIARAAGYRAPEV-- 495
++H ++KS+NIFL+ + D GL T+ S + ++ + + APEV
Sbjct: 125 LHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 184
Query: 496 -TDSRKATQASDVYSFGVVLLEILTGKSPIHTTGG-DELVHLVRWVHSVVREEWTAEVFD 553
D + SDVY+FG+VL E++TG+ P D+++ +V R + ++
Sbjct: 185 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG------RGYLSPDLSK 238
Query: 554 VELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIE 595
V N + M ++ C+ + D+RP P ++ IE
Sbjct: 239 VR----SNCPKAMKRLM---AECLKKKRDERPLFPQILASIE 273
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 7/96 (7%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSAL-APVIARAAG-----YRAPEVTDSRKA 501
VH N+ + N+ L ++ Y +SD GL+ A + AR+AG + APE + RK
Sbjct: 457 FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKF 516
Query: 502 TQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLV 536
+ SDV+S+GV + E L+ G+ P G E++ +
Sbjct: 517 SSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFI 552
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 115/282 (40%), Gaps = 41/282 (14%)
Query: 329 AEVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGK------RDFEQQMEIVGSIRHENVV 382
+ +G G+FG YK V K +NV + F+ ++ ++ RH N++
Sbjct: 15 GQRIGSGSFGTVYKGKWHGDVAV-----KMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 69
Query: 383 ELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXX 442
Y S +L + + GS S H E + +
Sbjct: 70 LFMGY--STKPQLAIVTQWCEGS-SLYHHLHIIETKFEM-----IKLIDIARQTAQGMDY 121
Query: 443 XXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALA-----PVIARAAGYRAPEV-- 495
++H ++KS+NIFL+ + D GL T+ S + ++ + + APEV
Sbjct: 122 LHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 181
Query: 496 -TDSRKATQASDVYSFGVVLLEILTGKSPIHTTGG-DELVHLVRWVHSVVREEWTAEVFD 553
D + SDVY+FG+VL E++TG+ P D+++ +V R + ++
Sbjct: 182 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG------RGYLSPDLSK 235
Query: 554 VELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIE 595
V N + M ++ C+ + D+RP P ++ IE
Sbjct: 236 VR----SNCPKAMKRLM---AECLKKKRDERPLFPQILASIE 270
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 110/291 (37%), Gaps = 42/291 (14%)
Query: 332 LGKGTFGMAY--KAILEDG------TTVVVKRLKDVNVGK--RDFEQQMEIVGSI-RHEN 380
LG+G FG +AI D T V VK LK K D +ME++ I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 381 VVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEG--------RIPLDWDTXXXXXXX 432
++ L ++ +Y S G++ L + R G P + +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 433 XXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG--- 489
K +H ++ + N+ + ++D GL + G
Sbjct: 156 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLP 215
Query: 490 --YRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREE 546
+ APE R T SDV+SFGV+L EI T G SP +EL L++ H + +
Sbjct: 216 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPS 275
Query: 547 WTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
N E+ M++ C +P QRP +V ++ +
Sbjct: 276 --------------NCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 115/282 (40%), Gaps = 41/282 (14%)
Query: 329 AEVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGK------RDFEQQMEIVGSIRHENVV 382
+ +G G+FG YK V K +NV + F+ ++ ++ RH N++
Sbjct: 18 GQRIGSGSFGTVYKGKWHGDVAV-----KMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 72
Query: 383 ELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXX 442
Y S +L + + GS S H E + +
Sbjct: 73 LFMGY--STKPQLAIVTQWCEGS-SLYHHLHIIETKFEM-----IKLIDIARQTAQGMDY 124
Query: 443 XXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALA-----PVIARAAGYRAPEV-- 495
++H ++KS+NIFL+ + D GL T+ S + ++ + + APEV
Sbjct: 125 LHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 184
Query: 496 -TDSRKATQASDVYSFGVVLLEILTGKSPIHTTGG-DELVHLVRWVHSVVREEWTAEVFD 553
D + SDVY+FG+VL E++TG+ P D+++ +V R + ++
Sbjct: 185 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG------RGYLSPDLSK 238
Query: 554 VELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIE 595
V N + M ++ C+ + D+RP P ++ IE
Sbjct: 239 VR----SNCPKAMKRLM---AECLKKKRDERPLFPQILASIE 273
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 92/217 (42%), Gaps = 18/217 (8%)
Query: 330 EVLGKGTFGMAYKAILEDGTTV----VVKRLKDVNVGKRD---FEQQMEIVGSIRHENVV 382
+VLG+G+FG + G+ +K LK + RD + + +I+ + H +V
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 383 ELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXX 442
+L + ++ + ++ D+ G + L E T
Sbjct: 90 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV--------MFTEEDVKFYLAELALALDH 141
Query: 443 XXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTIT---SALAPVIARAAGYRAPEVTDSR 499
+++ ++K NI L+ + + ++D GL+ + A Y APEV + R
Sbjct: 142 LHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRR 201
Query: 500 KATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLV 536
TQ++D +SFGV++ E+LTG P E + ++
Sbjct: 202 GHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMI 238
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 92/217 (42%), Gaps = 18/217 (8%)
Query: 330 EVLGKGTFGMAYKAILEDGTTV----VVKRLKDVNVGKRD---FEQQMEIVGSIRHENVV 382
+VLG+G+FG + G+ +K LK + RD + + +I+ + H +V
Sbjct: 31 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 90
Query: 383 ELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXX 442
+L + ++ + ++ D+ G + L E T
Sbjct: 91 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV--------MFTEEDVKFYLAELALALDH 142
Query: 443 XXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTIT---SALAPVIARAAGYRAPEVTDSR 499
+++ ++K NI L+ + + ++D GL+ + A Y APEV + R
Sbjct: 143 LHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRR 202
Query: 500 KATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLV 536
TQ++D +SFGV++ E+LTG P E + ++
Sbjct: 203 GHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMI 239
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 88/210 (41%), Gaps = 28/210 (13%)
Query: 329 AEVLGKGTFGMAYKAI-LEDGTTVVVKRLKDVN-VGKRDFEQQMEIVGSIRHENVVELKA 386
EVLGKG FG A K E G +V+K L + +R F ++++++ + H NV++
Sbjct: 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIG 74
Query: 387 YYYSKDEKL-MVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXX 445
Y KD++L + +Y G++ ++ S + W
Sbjct: 75 VLY-KDKRLNFITEYIKGGTLRGIIKSMDSQ----YPWSQ---RVSFAKDIASGMAYLHS 126
Query: 446 XKLVHGNIKSSNIFLNSQQYGCVSDLGLT--TITSALAPVIARAAG-------------- 489
++H ++ S N + + V+D GL + P R+
Sbjct: 127 MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNP 186
Query: 490 -YRAPEVTDSRKATQASDVYSFGVVLLEIL 518
+ APE+ + R + DV+SFG+VL EI+
Sbjct: 187 YWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 115/282 (40%), Gaps = 41/282 (14%)
Query: 329 AEVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGK------RDFEQQMEIVGSIRHENVV 382
+ +G G+FG YK V K +NV + F+ ++ ++ RH N++
Sbjct: 13 GQRIGSGSFGTVYKGKWHGDVAV-----KMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 383 ELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXX 442
Y S +L + + GS S H E + +
Sbjct: 68 LFMGY--STAPQLAIVTQWCEGS-SLYHHLHIIETKFEM-----IKLIDIARQTAQGMDY 119
Query: 443 XXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALA-----PVIARAAGYRAPEV-- 495
++H ++KS+NIFL+ + D GL T+ S + ++ + + APEV
Sbjct: 120 LHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 496 -TDSRKATQASDVYSFGVVLLEILTGKSPIHTTGG-DELVHLVRWVHSVVREEWTAEVFD 553
D + SDVY+FG+VL E++TG+ P D+++ +V R + ++
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG------RGYLSPDLSK 233
Query: 554 VELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIE 595
V N + M ++ C+ + D+RP P ++ IE
Sbjct: 234 VR----SNCPKAMKRLM---AECLKKKRDERPLFPQILASIE 268
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 91/206 (44%), Gaps = 29/206 (14%)
Query: 332 LGKGTFG----MAYKAILED-GTTVVVKRLKDVNVGK-RDFEQQMEIVGSIRHENVVELK 385
LGKG FG Y + ++ G V VK+L+ + RDF+++++I+ ++ + +V+ +
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 386 AYYYS--KDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXX 443
Y + E +V +Y G + L R LD
Sbjct: 75 GVSYGPGRPELRLVMEYLPSGCLRDFLQRHRAR----LD---ASRLLLYSSQICKGMEYL 127
Query: 444 XXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPV-----IARAAG-----YRAP 493
+ VH ++ + NI + S+ + ++D GL + L P+ + R G + AP
Sbjct: 128 GSRRCVHRDLAARNILVESEAHVKIADFGL----AKLLPLDKDXXVVREPGQSPIFWYAP 183
Query: 494 EVTDSRKATQASDVYSFGVVLLEILT 519
E ++ SDV+SFGVVL E+ T
Sbjct: 184 ESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 81/210 (38%), Gaps = 22/210 (10%)
Query: 332 LGKGTFGMAYKAILEDGTTVV-VKRLKDVNVGKRDFEQQM----EIVGSIRHENVVELKA 386
LGKG FG Y A + +V +K L + K E Q+ EI + H N++ L
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYN 90
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXX 446
Y+Y + ++ +Y G + L +D
Sbjct: 91 YFYDRRRIYLILEYAPRGELYKELQKS-------CTFDEQRTATIMEELADALMYCHGK- 142
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA-----GYRAPEVTDSRKA 501
K++H +IK N+ L + ++D G S AP + R Y PE+ + R
Sbjct: 143 KVIHRDIKPENLLLGLKGELKIADFGW----SVHAPSLRRKTMCGTLDYLPPEMIEGRMH 198
Query: 502 TQASDVYSFGVVLLEILTGKSPIHTTGGDE 531
+ D++ GV+ E+L G P + +E
Sbjct: 199 NEKVDLWCIGVLCYELLVGNPPFESASHNE 228
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 7/96 (7%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSAL-APVIARAAG-----YRAPEVTDSRKA 501
VH ++ + N+ L ++ Y +SD GL+ A + AR+AG + APE + RK
Sbjct: 131 FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKF 190
Query: 502 TQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLV 536
+ SDV+S+GV + E L+ G+ P G E++ +
Sbjct: 191 SSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFI 226
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 110/291 (37%), Gaps = 42/291 (14%)
Query: 332 LGKGTFGMAY--KAILEDG------TTVVVKRLKDVNVGK--RDFEQQMEIVGSI-RHEN 380
LG+G FG +AI D T V VK LK K D +ME++ I +H+N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 381 VVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEG--------RIPLDWDTXXXXXXX 432
++ L ++ +Y S G++ L + R G P + +
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 433 XXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG--- 489
K +H ++ + N+ + ++D GL + G
Sbjct: 197 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP 256
Query: 490 --YRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREE 546
+ APE R T SDV+SFGV+L EI T G SP +EL L++ H + +
Sbjct: 257 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPS 316
Query: 547 WTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
N E+ M++ C +P QRP +V ++ +
Sbjct: 317 --------------NCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 350
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 115/282 (40%), Gaps = 41/282 (14%)
Query: 329 AEVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGK------RDFEQQMEIVGSIRHENVV 382
+ +G G+FG YK V K +NV + F+ ++ ++ RH N++
Sbjct: 41 GQRIGSGSFGTVYKGKWHGDVAV-----KMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 95
Query: 383 ELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXX 442
Y S +L + + GS S H E + +
Sbjct: 96 LFMGY--STKPQLAIVTQWCEGS-SLYHHLHIIETKFEM-----IKLIDIARQTAQGMDY 147
Query: 443 XXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALA-----PVIARAAGYRAPEV-- 495
++H ++KS+NIFL+ + D GL T+ S + ++ + + APEV
Sbjct: 148 LHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 207
Query: 496 -TDSRKATQASDVYSFGVVLLEILTGKSPIHTTGG-DELVHLVRWVHSVVREEWTAEVFD 553
D + SDVY+FG+VL E++TG+ P D+++ +V R + ++
Sbjct: 208 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG------RGYLSPDLSK 261
Query: 554 VELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIE 595
V N + M ++ C+ + D+RP P ++ IE
Sbjct: 262 VR----SNCPKAMKRLM---AECLKKKRDERPLFPQILASIE 296
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 115/282 (40%), Gaps = 41/282 (14%)
Query: 329 AEVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGK------RDFEQQMEIVGSIRHENVV 382
+ +G G+FG YK V K +NV + F+ ++ ++ RH N++
Sbjct: 40 GQRIGSGSFGTVYKGKWHGDVAV-----KMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 94
Query: 383 ELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXX 442
Y S +L + + GS S H E + +
Sbjct: 95 LFMGY--STKPQLAIVTQWCEGS-SLYHHLHIIETKFEM-----IKLIDIARQTAQGMDY 146
Query: 443 XXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALA-----PVIARAAGYRAPEV-- 495
++H ++KS+NIFL+ + D GL T+ S + ++ + + APEV
Sbjct: 147 LHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 206
Query: 496 -TDSRKATQASDVYSFGVVLLEILTGKSPIHTTGG-DELVHLVRWVHSVVREEWTAEVFD 553
D + SDVY+FG+VL E++TG+ P D+++ +V R + ++
Sbjct: 207 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG------RGYLSPDLSK 260
Query: 554 VELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIE 595
V N + M ++ C+ + D+RP P ++ IE
Sbjct: 261 VR----SNCPKAMKRLM---AECLKKKRDERPLFPQILASIE 295
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 109/247 (44%), Gaps = 21/247 (8%)
Query: 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFE-----QQMEIVGSIRHENVVEL 384
E LG GT+ YK + + TT V LK+V + + +++ ++ ++HEN+V L
Sbjct: 11 EKLGNGTYATVYKGL--NKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRL 68
Query: 385 KAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXX 444
+++++ +V+++ M R G P +
Sbjct: 69 YDVIHTENKLTLVFEFMDNDLKKYM--DSRTVGNTPRGLE-LNLVKYFQWQLLQGLAFCH 125
Query: 445 XXKLVHGNIKSSNIFLNSQQYGCVSDLGLTT-----ITSALAPVIARAAGYRAPEV-TDS 498
K++H ++K N+ +N + + D GL + + + V+ YRAP+V S
Sbjct: 126 ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVT--LWYRAPDVLMGS 183
Query: 499 RKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLR 558
R + + D++S G +L E++TGK T +E + L+ + E V +L +
Sbjct: 184 RTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSV--TKLPK 241
Query: 559 Y-PNIEE 564
Y PNI++
Sbjct: 242 YNPNIQQ 248
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 110/291 (37%), Gaps = 42/291 (14%)
Query: 332 LGKGTFGMAY--KAILEDG------TTVVVKRLKDVNVGK--RDFEQQMEIVGSI-RHEN 380
LG+G FG +AI D T V VK LK K D +ME++ I +H+N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 381 VVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEG--------RIPLDWDTXXXXXXX 432
++ L ++ +Y S G++ L + R G P + +
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 433 XXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG--- 489
K +H ++ + N+ + ++D GL + G
Sbjct: 141 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP 200
Query: 490 --YRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREE 546
+ APE R T SDV+SFGV+L EI T G SP +EL L++ H + +
Sbjct: 201 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPS 260
Query: 547 WTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
N E+ M++ C +P QRP +V ++ +
Sbjct: 261 --------------NCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 294
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 110/291 (37%), Gaps = 42/291 (14%)
Query: 332 LGKGTFGMAY--KAILEDG------TTVVVKRLKDVNVGK--RDFEQQMEIVGSI-RHEN 380
LG+G FG +AI D T V VK LK K D +ME++ I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 381 VVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEG--------RIPLDWDTXXXXXXX 432
++ L ++ +Y S G++ L + R G P + +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 433 XXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG--- 489
K +H ++ + N+ + ++D GL + G
Sbjct: 156 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP 215
Query: 490 --YRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREE 546
+ APE R T SDV+SFGV+L EI T G SP +EL L++ H + +
Sbjct: 216 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPS 275
Query: 547 WTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
N E+ M++ C +P QRP +V ++ +
Sbjct: 276 --------------NCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 105/259 (40%), Gaps = 47/259 (18%)
Query: 330 EVLGKGTFGMAYKAIL------EDGTTVVVKRLKDVNVG--KRDFEQQMEIVGSIRHENV 381
E LG+ FG YK L E V +K LKD G + +F + + ++H NV
Sbjct: 32 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 91
Query: 382 VELKAYYYSKDEKL-MVYDYYSLGSVSAML-----HSERG---EGRIPLDWDTXXXXXXX 432
V L +KD+ L M++ Y S G + L HS+ G + R
Sbjct: 92 VCLLGVV-TKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHL 150
Query: 433 XXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGL----------TTITSALAP 482
+VH ++ + N+ + + +SDLGL + ++L P
Sbjct: 151 VAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 210
Query: 483 VIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVR---- 537
+ + APE K + SD++S+GVVL E+ + G P ++V ++R
Sbjct: 211 I-----RWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQV 265
Query: 538 ---------WVHSVVREEW 547
WV++++ E W
Sbjct: 266 LPCPDDCPAWVYALMIECW 284
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 110/291 (37%), Gaps = 42/291 (14%)
Query: 332 LGKGTFGMAY--KAILEDG------TTVVVKRLKDVNVGK--RDFEQQMEIVGSI-RHEN 380
LG+G FG +AI D T V VK LK K D +ME++ I +H+N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 381 VVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEG--------RIPLDWDTXXXXXXX 432
++ L ++ +Y S G++ L + R G P + +
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 433 XXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG--- 489
K +H ++ + N+ + ++D GL + G
Sbjct: 145 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP 204
Query: 490 --YRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREE 546
+ APE R T SDV+SFGV+L EI T G SP +EL L++ H + +
Sbjct: 205 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPS 264
Query: 547 WTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
N E+ M++ C +P QRP +V ++ +
Sbjct: 265 --------------NCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 298
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 105/259 (40%), Gaps = 47/259 (18%)
Query: 330 EVLGKGTFGMAYKAIL------EDGTTVVVKRLKDVNVG--KRDFEQQMEIVGSIRHENV 381
E LG+ FG YK L E V +K LKD G + +F + + ++H NV
Sbjct: 15 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 74
Query: 382 VELKAYYYSKDEKL-MVYDYYSLGSVSAML-----HSERG---EGRIPLDWDTXXXXXXX 432
V L +KD+ L M++ Y S G + L HS+ G + R
Sbjct: 75 VCLLGVV-TKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHL 133
Query: 433 XXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGL----------TTITSALAP 482
+VH ++ + N+ + + +SDLGL + ++L P
Sbjct: 134 VAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 193
Query: 483 VIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVR---- 537
+ + APE K + SD++S+GVVL E+ + G P ++V ++R
Sbjct: 194 I-----RWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQV 248
Query: 538 ---------WVHSVVREEW 547
WV++++ E W
Sbjct: 249 LPCPDDCPAWVYALMIECW 267
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 95/225 (42%), Gaps = 20/225 (8%)
Query: 312 FEGCNYAFDLEDLLRASAEVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKR--DFEQQ 369
+E + ED E LG G FG YKA ++ + + ++ D + D+ +
Sbjct: 26 YEHVTRDLNPEDFWEIIGE-LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVE 84
Query: 370 MEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGSVSA-MLHSERGEGRIPLDWDTXXX 428
++I+ S H N+V+L +Y ++ ++ ++ + G+V A ML ER PL T
Sbjct: 85 IDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELER-----PL---TESQ 136
Query: 429 XXXXXXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLT---TITSALAPVIA 485
K++H ++K+ NI ++D G++ T T
Sbjct: 137 IQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI 196
Query: 486 RAAGYRAPEV-----TDSRKATQASDVYSFGVVLLEILTGKSPIH 525
+ APEV + R +DV+S G+ L+E+ + P H
Sbjct: 197 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHH 241
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 110/291 (37%), Gaps = 42/291 (14%)
Query: 332 LGKGTFGMAY--KAILEDG------TTVVVKRLKDVNVGK--RDFEQQMEIVGSI-RHEN 380
LG+G FG +AI D T V VK LK K D +ME++ I +H+N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 381 VVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEG--------RIPLDWDTXXXXXXX 432
++ L ++ +Y S G++ L + R G P + +
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 433 XXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG--- 489
K +H ++ + N+ + ++D GL + G
Sbjct: 148 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP 207
Query: 490 --YRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREE 546
+ APE R T SDV+SFGV+L EI T G SP +EL L++ H + +
Sbjct: 208 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPS 267
Query: 547 WTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
N E+ M++ C +P QRP +V ++ +
Sbjct: 268 --------------NCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 301
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 112/296 (37%), Gaps = 52/296 (17%)
Query: 332 LGKGTFGMAY--KAILEDG------TTVVVKRLKDVNVGK--RDFEQQMEIVGSI-RHEN 380
LG+G FG +AI D T V VK LK K D +ME++ I +H+N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 381 VVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEG--------RIPLDWDTXXXXXXX 432
++ L ++ +Y S G++ L + R G P + +
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 433 XXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLT----------TITSALAP 482
K +H ++ + N+ + ++D GL T+ P
Sbjct: 149 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP 208
Query: 483 VIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHS 541
V + APE R T SDV+SFGV+L EI T G SP +EL L++ H
Sbjct: 209 V-----KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHR 263
Query: 542 VVREEWTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
+ + N E+ M++ C +P QRP +V ++ +
Sbjct: 264 MDKPS--------------NCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 302
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 112/296 (37%), Gaps = 52/296 (17%)
Query: 332 LGKGTFGMAY--KAILEDG------TTVVVKRLKDVNVGK--RDFEQQMEIVGSI-RHEN 380
LG+G FG +AI D T V VK LK K D +ME++ I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 381 VVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEG--------RIPLDWDTXXXXXXX 432
++ L ++ +Y S G++ L + R G P + +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 433 XXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLT----------TITSALAP 482
K +H ++ + N+ + ++D GL T+ P
Sbjct: 156 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP 215
Query: 483 VIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHS 541
V + APE R T SDV+SFGV+L EI T G SP +EL L++ H
Sbjct: 216 V-----KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHR 270
Query: 542 VVREEWTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
+ + N E+ M++ C +P QRP +V ++ +
Sbjct: 271 MDKPS--------------NCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 95/225 (42%), Gaps = 20/225 (8%)
Query: 312 FEGCNYAFDLEDLLRASAEVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKR--DFEQQ 369
+E + ED E LG G FG YKA ++ + + ++ D + D+ +
Sbjct: 26 YEHVTRDLNPEDFWEIIGE-LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVE 84
Query: 370 MEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGSVSA-MLHSERGEGRIPLDWDTXXX 428
++I+ S H N+V+L +Y ++ ++ ++ + G+V A ML ER PL T
Sbjct: 85 IDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELER-----PL---TESQ 136
Query: 429 XXXXXXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA 488
K++H ++K+ NI ++D G++ +
Sbjct: 137 IQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFI 196
Query: 489 G---YRAPEV-----TDSRKATQASDVYSFGVVLLEILTGKSPIH 525
G + APEV + R +DV+S G+ L+E+ + P H
Sbjct: 197 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHH 241
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 95/225 (42%), Gaps = 20/225 (8%)
Query: 312 FEGCNYAFDLEDLLRASAEVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKR--DFEQQ 369
+E + ED E LG G FG YKA ++ + + ++ D + D+ +
Sbjct: 26 YEHVTRDLNPEDFWEIIGE-LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVE 84
Query: 370 MEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGSVSA-MLHSERGEGRIPLDWDTXXX 428
++I+ S H N+V+L +Y ++ ++ ++ + G+V A ML ER PL T
Sbjct: 85 IDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELER-----PL---TESQ 136
Query: 429 XXXXXXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA 488
K++H ++K+ NI ++D G++ +
Sbjct: 137 IQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFI 196
Query: 489 G---YRAPEV-----TDSRKATQASDVYSFGVVLLEILTGKSPIH 525
G + APEV + R +DV+S G+ L+E+ + P H
Sbjct: 197 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHH 241
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/283 (19%), Positives = 120/283 (42%), Gaps = 26/283 (9%)
Query: 332 LGKGTFGMAYKAILEDGTTVVVKRLKDVNVG---KRDFEQQMEIVGSIRHENVVELKAYY 388
LG G G+ +K + V+ ++L + + + ++++++ +V +
Sbjct: 33 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 92
Query: 389 YSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKL 448
YS E + ++ GS+ +L + GRIP K+
Sbjct: 93 YSDGEISICMEHMDGGSLDQVL---KKAGRIP----EQILGKVSIAVIKGLTYLREKHKI 145
Query: 449 VHGNIKSSNIFLNSQQYGCVSDLGLT-TITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
+H ++K SNI +NS+ + D G++ + ++A Y +PE + SD+
Sbjct: 146 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDI 205
Query: 508 YSFGVVLLEILTGKSPIHT-TGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEEEM 566
+S G+ L+E+ G+ PI + +G + L+ ++ + + + VF +E + N
Sbjct: 206 WSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVN----- 260
Query: 567 VEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPNDSENRPSSG 609
C+++ P +R + ++ V ++ +D+E +G
Sbjct: 261 --------KCLIKNPAERADLKQLM-VHAFIKRSDAEEVDFAG 294
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 114/282 (40%), Gaps = 41/282 (14%)
Query: 329 AEVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGK------RDFEQQMEIVGSIRHENVV 382
+ +G G+FG YK V K +NV + F+ ++ ++ RH N++
Sbjct: 13 GQRIGSGSFGTVYKGKWHGDVAV-----KMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 383 ELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXX 442
Y S +L + + GS S H E + +
Sbjct: 68 LFMGY--STKPQLAIVTQWCEGS-SLYHHLHIIETKFEM-----IKLIDIARQTAQGMDY 119
Query: 443 XXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALA-----PVIARAAGYRAPEV-- 495
++H ++KS+NIFL+ + D GL T S + ++ + + APEV
Sbjct: 120 LHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 496 -TDSRKATQASDVYSFGVVLLEILTGKSPIHTTGG-DELVHLVRWVHSVVREEWTAEVFD 553
D + SDVY+FG+VL E++TG+ P D+++ +V R + ++
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG------RGYLSPDLSK 233
Query: 554 VELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIE 595
V N + M ++ C+ + D+RP P ++ IE
Sbjct: 234 VR----SNCPKAMKRLM---AECLKKKRDERPLFPQILASIE 268
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 90/206 (43%), Gaps = 29/206 (14%)
Query: 332 LGKGTFG----MAYKAILED-GTTVVVKRLKDVNVGK-RDFEQQMEIVGSIRHENVVELK 385
LGKG FG Y + ++ G V VK+L+ + RDF+++++I+ ++ + +V+ +
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 386 AYYYSKDEK--LMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXX 443
Y + +V +Y G + L R LD
Sbjct: 78 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR----LD---ASRLLLYSSQICKGMEYL 130
Query: 444 XXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPV-----IARAAG-----YRAP 493
+ VH ++ + NI + S+ + ++D GL + L P+ + R G + AP
Sbjct: 131 GSRRCVHRDLAARNILVESEAHVKIADFGL----AKLLPLDKDYYVVREPGQSPIFWYAP 186
Query: 494 EVTDSRKATQASDVYSFGVVLLEILT 519
E ++ SDV+SFGVVL E+ T
Sbjct: 187 ESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 118/290 (40%), Gaps = 42/290 (14%)
Query: 332 LGKGTFGMAYKAILE---DGT--TVVVKRLK-DVNVGKRD-FEQQMEIVGSIRHENVVEL 384
LG+G FG + DGT V VK LK D R ++Q+++I+ ++ HE++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 385 KAYYYSKDEK--LMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXX 442
K + EK +V +Y LGS+ L P
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL---------PRHSIGLAQLLLFAQQICEGMAY 132
Query: 443 XXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLT-TITSALAPVIARAAG-----YRAPEVT 496
+H N+ + N+ L++ + + D GL + R G + APE
Sbjct: 133 LHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL 192
Query: 497 DSRKATQASDVYSFGVVLLEILT----GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVF 552
K ASDV+SFGV L E+LT +SP T EL+ + + +V+R
Sbjct: 193 KEYKFYYASDVWSFGVTLYELLTHCDSSQSP--PTKFLELIGIAQGQMTVLRL------- 243
Query: 553 DVELL----RYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVR 598
ELL R P ++ E+ + +C RP +++ +++ V
Sbjct: 244 -TELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTVH 292
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 90/206 (43%), Gaps = 29/206 (14%)
Query: 332 LGKGTFG----MAYKAILED-GTTVVVKRLKDVNVGK-RDFEQQMEIVGSIRHENVVELK 385
LGKG FG Y + ++ G V VK+L+ + RDF+++++I+ ++ + +V+ +
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 386 AYYYSKDEK--LMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXX 443
Y + +V +Y G + L R LD
Sbjct: 79 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR----LD---ASRLLLYSSQICKGMEYL 131
Query: 444 XXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPV-----IARAAG-----YRAP 493
+ VH ++ + NI + S+ + ++D GL + L P+ + R G + AP
Sbjct: 132 GSRRCVHRDLAARNILVESEAHVKIADFGL----AKLLPLDKDYYVVREPGQSPIFWYAP 187
Query: 494 EVTDSRKATQASDVYSFGVVLLEILT 519
E ++ SDV+SFGVVL E+ T
Sbjct: 188 ESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 118/290 (40%), Gaps = 42/290 (14%)
Query: 332 LGKGTFGMAYKAILE---DGT--TVVVKRLK-DVNVGKRD-FEQQMEIVGSIRHENVVEL 384
LG+G FG + DGT V VK LK D R ++Q+++I+ ++ HE++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 385 KAYYYSKDEK--LMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXX 442
K + EK +V +Y LGS+ L P
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL---------PRHSIGLAQLLLFAQQICEGMAY 132
Query: 443 XXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLT-TITSALAPVIARAAG-----YRAPEVT 496
+H N+ + N+ L++ + + D GL + R G + APE
Sbjct: 133 LHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL 192
Query: 497 DSRKATQASDVYSFGVVLLEILT----GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVF 552
K ASDV+SFGV L E+LT +SP T EL+ + + +V+R
Sbjct: 193 KEYKFYYASDVWSFGVTLYELLTHCDSSQSP--PTKFLELIGIAQGQMTVLRL------- 243
Query: 553 DVELL----RYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVR 598
ELL R P ++ E+ + +C RP +++ +++ V
Sbjct: 244 -TELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTVH 292
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 114/282 (40%), Gaps = 41/282 (14%)
Query: 329 AEVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGK------RDFEQQMEIVGSIRHENVV 382
+ +G G+FG YK V K +NV + F+ ++ ++ RH N++
Sbjct: 33 GQRIGSGSFGTVYKGKWHGDVAV-----KMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 87
Query: 383 ELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXX 442
Y S +L + + GS S H E + +
Sbjct: 88 LFMGY--STKPQLAIVTQWCEGS-SLYHHLHIIETKFEM-----IKLIDIARQTAQGMDY 139
Query: 443 XXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALA-----PVIARAAGYRAPEV-- 495
++H ++KS+NIFL+ + D GL T S + ++ + + APEV
Sbjct: 140 LHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 199
Query: 496 -TDSRKATQASDVYSFGVVLLEILTGKSPIHTTGG-DELVHLVRWVHSVVREEWTAEVFD 553
D + SDVY+FG+VL E++TG+ P D+++ +V R + ++
Sbjct: 200 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG------RGYLSPDLSK 253
Query: 554 VELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIE 595
V N + M ++ C+ + D+RP P ++ IE
Sbjct: 254 VR----SNCPKAMKRLM---AECLKKKRDERPLFPQILASIE 288
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/287 (20%), Positives = 107/287 (37%), Gaps = 39/287 (13%)
Query: 330 EVLGKGTFGMA----YKAILEDGTTVVVKRLKDVNVGK----RDFEQQMEIVGSIRHENV 381
E LG G+FG+ + A +V VK LK + + DF +++ + S+ H N+
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 382 VELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXX 441
+ L + K MV + LGS+ L +G +
Sbjct: 84 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLL-------GTLSRYAVQVAEGMG 135
Query: 442 XXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTIT------SALAPVIARAAGYRAPEV 495
+ +H ++ + N+ L ++ + D GL + + APE
Sbjct: 136 YLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPES 195
Query: 496 TDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDV 554
+R + ASD + FGV L E+ T G+ P G +++H + D
Sbjct: 196 LKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI----------------DK 239
Query: 555 ELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPND 601
E R P E+ ++ + + C P+ RP + + +P D
Sbjct: 240 EGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTD 286
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/287 (20%), Positives = 107/287 (37%), Gaps = 39/287 (13%)
Query: 330 EVLGKGTFGMA----YKAILEDGTTVVVKRLKDVNVGK----RDFEQQMEIVGSIRHENV 381
E LG G+FG+ + A +V VK LK + + DF +++ + S+ H N+
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 382 VELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXX 441
+ L + K MV + LGS+ L +G +
Sbjct: 78 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLL-------GTLSRYAVQVAEGMG 129
Query: 442 XXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITS------ALAPVIARAAGYRAPEV 495
+ +H ++ + N+ L ++ + D GL + + APE
Sbjct: 130 YLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES 189
Query: 496 TDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDV 554
+R + ASD + FGV L E+ T G+ P G +++H + D
Sbjct: 190 LKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI----------------DK 233
Query: 555 ELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPND 601
E R P E+ ++ + + C P+ RP + + +P D
Sbjct: 234 EGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTD 280
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 90/206 (43%), Gaps = 29/206 (14%)
Query: 332 LGKGTFG----MAYKAILED-GTTVVVKRLKDVNVGK-RDFEQQMEIVGSIRHENVVELK 385
LGKG FG Y + ++ G V VK+L+ + RDF+++++I+ ++ + +V+ +
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 386 AYYYSKDEK--LMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXX 443
Y + +V +Y G + L R LD
Sbjct: 91 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR----LD---ASRLLLYSSQICKGMEYL 143
Query: 444 XXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPV-----IARAAG-----YRAP 493
+ VH ++ + NI + S+ + ++D GL + L P+ + R G + AP
Sbjct: 144 GSRRCVHRDLAARNILVESEAHVKIADFGL----AKLLPLDKDYYVVREPGQSPIFWYAP 199
Query: 494 EVTDSRKATQASDVYSFGVVLLEILT 519
E ++ SDV+SFGVVL E+ T
Sbjct: 200 ESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 114/282 (40%), Gaps = 41/282 (14%)
Query: 329 AEVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGK------RDFEQQMEIVGSIRHENVV 382
+ +G G+FG YK V K +NV + F+ ++ ++ RH N++
Sbjct: 41 GQRIGSGSFGTVYKGKWHGDVAV-----KMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 95
Query: 383 ELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXX 442
Y S +L + + GS S H E + +
Sbjct: 96 LFMGY--STKPQLAIVTQWCEGS-SLYHHLHIIETKFEM-----IKLIDIARQTAQGMDY 147
Query: 443 XXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALA-----PVIARAAGYRAPEV-- 495
++H ++KS+NIFL+ + D GL T S + ++ + + APEV
Sbjct: 148 LHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 207
Query: 496 -TDSRKATQASDVYSFGVVLLEILTGKSPIHTTGG-DELVHLVRWVHSVVREEWTAEVFD 553
D + SDVY+FG+VL E++TG+ P D+++ +V R + ++
Sbjct: 208 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG------RGYLSPDLSK 261
Query: 554 VELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIE 595
V N + M ++ C+ + D+RP P ++ IE
Sbjct: 262 VR----SNCPKAMKRLM---AECLKKKRDERPLFPQILASIE 296
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/287 (20%), Positives = 107/287 (37%), Gaps = 39/287 (13%)
Query: 330 EVLGKGTFGMA----YKAILEDGTTVVVKRLKDVNVGK----RDFEQQMEIVGSIRHENV 381
E LG G+FG+ + A +V VK LK + + DF +++ + S+ H N+
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 382 VELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXX 441
+ L + K MV + LGS+ L +G +
Sbjct: 74 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLL-------GTLSRYAVQVAEGMG 125
Query: 442 XXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITS------ALAPVIARAAGYRAPEV 495
+ +H ++ + N+ L ++ + D GL + + APE
Sbjct: 126 YLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES 185
Query: 496 TDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDV 554
+R + ASD + FGV L E+ T G+ P G +++H + D
Sbjct: 186 LKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI----------------DK 229
Query: 555 ELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPND 601
E R P E+ ++ + + C P+ RP + + +P D
Sbjct: 230 EGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTD 276
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/287 (20%), Positives = 107/287 (37%), Gaps = 39/287 (13%)
Query: 330 EVLGKGTFGMA----YKAILEDGTTVVVKRLKDVNVGK----RDFEQQMEIVGSIRHENV 381
E LG G+FG+ + A +V VK LK + + DF +++ + S+ H N+
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 382 VELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXX 441
+ L + K MV + LGS+ L +G +
Sbjct: 84 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLL-------GTLSRYAVQVAEGMG 135
Query: 442 XXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITS------ALAPVIARAAGYRAPEV 495
+ +H ++ + N+ L ++ + D GL + + APE
Sbjct: 136 YLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES 195
Query: 496 TDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDV 554
+R + ASD + FGV L E+ T G+ P G +++H + D
Sbjct: 196 LKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI----------------DK 239
Query: 555 ELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPND 601
E R P E+ ++ + + C P+ RP + + +P D
Sbjct: 240 EGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTD 286
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 86/205 (41%), Gaps = 11/205 (5%)
Query: 332 LGKGTFGMAYKAILEDGTTVVVKRLKDVNVG---KRDFEQQMEIVGSIRHENVVELKAYY 388
LG G G+ +K + V+ ++L + + + ++++++ +V +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 389 YSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKL 448
YS E + ++ GS+ +L + GRIP K+
Sbjct: 74 YSDGEISICMEHMDGGSLDQVL---KKAGRIP----EQILGKVSIAVIKGLTYLREKHKI 126
Query: 449 VHGNIKSSNIFLNSQQYGCVSDLGLT-TITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
+H ++K SNI +NS+ + D G++ + ++A Y +PE + SD+
Sbjct: 127 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDI 186
Query: 508 YSFGVVLLEILTGKSPIHTTGGDEL 532
+S G+ L+E+ G+ PI EL
Sbjct: 187 WSMGLSLVEMAVGRYPIPPPDAKEL 211
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 86/205 (41%), Gaps = 11/205 (5%)
Query: 332 LGKGTFGMAYKAILEDGTTVVVKRLKDVNVG---KRDFEQQMEIVGSIRHENVVELKAYY 388
LG G G+ +K + V+ ++L + + + ++++++ +V +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 389 YSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKL 448
YS E + ++ GS+ +L + GRIP K+
Sbjct: 74 YSDGEISICMEHMDGGSLDQVL---KKAGRIP----EQILGKVSIAVIKGLTYLREKHKI 126
Query: 449 VHGNIKSSNIFLNSQQYGCVSDLGLT-TITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
+H ++K SNI +NS+ + D G++ + ++A Y +PE + SD+
Sbjct: 127 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDI 186
Query: 508 YSFGVVLLEILTGKSPIHTTGGDEL 532
+S G+ L+E+ G+ PI EL
Sbjct: 187 WSMGLSLVEMAVGRYPIPPPDAKEL 211
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 86/205 (41%), Gaps = 11/205 (5%)
Query: 332 LGKGTFGMAYKAILEDGTTVVVKRLKDVNVG---KRDFEQQMEIVGSIRHENVVELKAYY 388
LG G G+ +K + V+ ++L + + + ++++++ +V +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 389 YSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKL 448
YS E + ++ GS+ +L + GRIP K+
Sbjct: 74 YSDGEISICMEHMDGGSLDQVL---KKAGRIP----EQILGKVSIAVIKGLTYLREKHKI 126
Query: 449 VHGNIKSSNIFLNSQQYGCVSDLGLT-TITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
+H ++K SNI +NS+ + D G++ + ++A Y +PE + SD+
Sbjct: 127 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDI 186
Query: 508 YSFGVVLLEILTGKSPIHTTGGDEL 532
+S G+ L+E+ G+ PI EL
Sbjct: 187 WSMGLSLVEMAVGRYPIPPPDAKEL 211
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 118/302 (39%), Gaps = 59/302 (19%)
Query: 332 LGKGTFGMAYKA------ILEDGTTVVVKRLKDVNVG--KRDFEQQMEIVGSIRHENVVE 383
+G+G FG ++A E T V VK LK+ + DF+++ ++ + N+V+
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 384 LKAYYYSKDEKLMVYDYYSLG------------SVSAMLHSE-------RGEGRIPLDWD 424
L ++++Y + G +V ++ HS+ G PL
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPL--- 171
Query: 425 TXXXXXXXXXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLT-TITSALAPV 483
+ K VH ++ + N + ++D GL+ I SA
Sbjct: 172 SCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSA---D 228
Query: 484 IARAAG-------YRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHL 535
+A G + PE + T SDV+++GVVL EI + G P + +E+++
Sbjct: 229 YYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYY 288
Query: 536 VRWVHSVVREEWTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIE 595
VR D +L P E +E+ + C ++P RP + R+++
Sbjct: 289 VR---------------DGNILACP--ENCPLELYNLMRLCWSKLPADRPSFCSIHRILQ 331
Query: 596 NV 597
+
Sbjct: 332 RM 333
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 85/198 (42%), Gaps = 16/198 (8%)
Query: 332 LGKGTFGMAYKAILED-GTTVVVKRLKDVNVGKRDFE-QQMEIVGSIRHENVVELKAYYY 389
+G+G+ G+ A + G V VK++ +R+ ++ I+ +HENVVE+ Y
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 390 SKDEKLMVYDYYSLGSVSAML-HSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKL 448
DE +V ++ G+++ ++ H+ E +I +
Sbjct: 97 VGDELWVVMEFLEGGALTDIVTHTRMNEEQI----------AAVCLAVLQALSVLHAQGV 146
Query: 449 VHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG---YRAPEVTDSRKATQAS 505
+H +IKS +I L +SD G S P G + APE+
Sbjct: 147 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 206
Query: 506 DVYSFGVVLLEILTGKSP 523
D++S G++++E++ G+ P
Sbjct: 207 DIWSLGIMVIEMVDGEPP 224
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 91/217 (41%), Gaps = 18/217 (8%)
Query: 330 EVLGKGTFGMAY---KAILED-GTTVVVKRLKDVNVGKRD---FEQQMEIVGSIRHENVV 382
+VLG+G+FG + K D G +K LK + RD + + +I+ + H VV
Sbjct: 34 KVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVV 93
Query: 383 ELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXX 442
+L + ++ + ++ D+ G + L E T
Sbjct: 94 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV--------MFTEEDVKFYLAELALGLDH 145
Query: 443 XXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTIT---SALAPVIARAAGYRAPEVTDSR 499
+++ ++K NI L+ + + ++D GL+ A Y APEV + +
Sbjct: 146 LHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQ 205
Query: 500 KATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLV 536
+ ++D +S+GV++ E+LTG P E + L+
Sbjct: 206 GHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLI 242
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 85/198 (42%), Gaps = 16/198 (8%)
Query: 332 LGKGTFGMAYKA-ILEDGTTVVVKRLKDVNVGKRDFE-QQMEIVGSIRHENVVELKAYYY 389
+G+G+ G+ A + G V VK++ +R+ ++ I+ +HENVVE+ Y
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 390 SKDEKLMVYDYYSLGSVSAML-HSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKL 448
DE +V ++ G+++ ++ H+ E +I +
Sbjct: 99 VGDELWVVMEFLEGGALTDIVTHTRMNEEQI----------AAVCLAVLQALSVLHAQGV 148
Query: 449 VHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG---YRAPEVTDSRKATQAS 505
+H +IKS +I L +SD G S P G + APE+
Sbjct: 149 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 208
Query: 506 DVYSFGVVLLEILTGKSP 523
D++S G++++E++ G+ P
Sbjct: 209 DIWSLGIMVIEMVDGEPP 226
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 85/198 (42%), Gaps = 16/198 (8%)
Query: 332 LGKGTFGMAYKAILED-GTTVVVKRLKDVNVGKRDFE-QQMEIVGSIRHENVVELKAYYY 389
+G+G+ G+ A + G V VK++ +R+ ++ I+ +HENVVE+ Y
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 390 SKDEKLMVYDYYSLGSVSAML-HSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKL 448
DE +V ++ G+++ ++ H+ E +I +
Sbjct: 88 VGDELWVVMEFLEGGALTDIVTHTRMNEEQI----------AAVCLAVLQALSVLHAQGV 137
Query: 449 VHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG---YRAPEVTDSRKATQAS 505
+H +IKS +I L +SD G S P G + APE+
Sbjct: 138 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 197
Query: 506 DVYSFGVVLLEILTGKSP 523
D++S G++++E++ G+ P
Sbjct: 198 DIWSLGIMVIEMVDGEPP 215
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 86/205 (41%), Gaps = 11/205 (5%)
Query: 332 LGKGTFGMAYKAILEDGTTVVVKRLKDVNVG---KRDFEQQMEIVGSIRHENVVELKAYY 388
LG G G+ +K + V+ ++L + + + ++++++ +V +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 389 YSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKL 448
YS E + ++ GS+ +L + GRIP K+
Sbjct: 74 YSDGEISICMEHMDGGSLDQVL---KKAGRIP----EQILGKVSIAVIKGLTYLREKHKI 126
Query: 449 VHGNIKSSNIFLNSQQYGCVSDLGLT-TITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
+H ++K SNI +NS+ + D G++ + ++A Y +PE + SD+
Sbjct: 127 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDI 186
Query: 508 YSFGVVLLEILTGKSPIHTTGGDEL 532
+S G+ L+E+ G+ PI EL
Sbjct: 187 WSMGLSLVEMAVGRYPIPPPDAKEL 211
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 86/205 (41%), Gaps = 11/205 (5%)
Query: 332 LGKGTFGMAYKAILEDGTTVVVKRLKDVNVG---KRDFEQQMEIVGSIRHENVVELKAYY 388
LG G G+ +K + V+ ++L + + + ++++++ +V +
Sbjct: 76 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 135
Query: 389 YSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKL 448
YS E + ++ GS+ +L + GRIP K+
Sbjct: 136 YSDGEISICMEHMDGGSLDQVL---KKAGRIP----EQILGKVSIAVIKGLTYLREKHKI 188
Query: 449 VHGNIKSSNIFLNSQQYGCVSDLGLT-TITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
+H ++K SNI +NS+ + D G++ + ++A Y +PE + SD+
Sbjct: 189 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDI 248
Query: 508 YSFGVVLLEILTGKSPIHTTGGDEL 532
+S G+ L+E+ G+ PI EL
Sbjct: 249 WSMGLSLVEMAVGRYPIPPPDAKEL 273
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 108/272 (39%), Gaps = 29/272 (10%)
Query: 332 LGKGTFGMAYKAILEDGT-TVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYS 390
LG G +G Y+ + + + TV VK LK+ + +F ++ ++ I+H N+V+L
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 287
Query: 391 KDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVH 450
+ ++ ++ + G++ L R R + + +H
Sbjct: 288 EPPFYIITEFMTYGNLLDYL---RECNRQEV---SAVVLLYMATQISSAMEYLEKKNFIH 341
Query: 451 GNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG----YRAPEVTDSRKATQASD 506
N+ + N + V+D GL+ + + A + APE K + SD
Sbjct: 342 RNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 401
Query: 507 VYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEEE 565
V++FGV+L EI T G SP ++ L+ D + R E+
Sbjct: 402 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--------------KDYRMERPEGCPEK 447
Query: 566 MVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
+ E+++ +C P RP ++ + E +
Sbjct: 448 VYELMR---ACWQWNPSDRPSFAEIHQAFETM 476
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 108/272 (39%), Gaps = 29/272 (10%)
Query: 332 LGKGTFGMAYKAILEDGT-TVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYS 390
LG G +G Y+ + + + TV VK LK+ + +F ++ ++ I+H N+V+L
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 326
Query: 391 KDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVH 450
+ ++ ++ + G++ L R R ++ +H
Sbjct: 327 EPPFYIITEFMTYGNLLDYL---RECNRQEVN---AVVLLYMATQISSAMEYLEKKNFIH 380
Query: 451 GNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG----YRAPEVTDSRKATQASD 506
N+ + N + V+D GL+ + + A + APE K + SD
Sbjct: 381 RNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 440
Query: 507 VYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEEE 565
V++FGV+L EI T G SP ++ L+ D + R E+
Sbjct: 441 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--------------KDYRMERPEGCPEK 486
Query: 566 MVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
+ E+++ +C P RP ++ + E +
Sbjct: 487 VYELMR---ACWQWNPSDRPSFAEIHQAFETM 515
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 86/205 (41%), Gaps = 11/205 (5%)
Query: 332 LGKGTFGMAYKAILEDGTTVVVKRLKDVNVG---KRDFEQQMEIVGSIRHENVVELKAYY 388
LG G G+ +K + V+ ++L + + + ++++++ +V +
Sbjct: 41 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 100
Query: 389 YSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKL 448
YS E + ++ GS+ +L + GRIP K+
Sbjct: 101 YSDGEISICMEHMDGGSLDQVL---KKAGRIP----EQILGKVSIAVIKGLTYLREKHKI 153
Query: 449 VHGNIKSSNIFLNSQQYGCVSDLGLT-TITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
+H ++K SNI +NS+ + D G++ + ++A Y +PE + SD+
Sbjct: 154 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDI 213
Query: 508 YSFGVVLLEILTGKSPIHTTGGDEL 532
+S G+ L+E+ G+ PI EL
Sbjct: 214 WSMGLSLVEMAVGRYPIPPPDAKEL 238
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 85/198 (42%), Gaps = 16/198 (8%)
Query: 332 LGKGTFGMAYKAILED-GTTVVVKRLKDVNVGKRDFE-QQMEIVGSIRHENVVELKAYYY 389
+G+G+ G+ A + G V VK++ +R+ ++ I+ +HENVVE+ Y
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 390 SKDEKLMVYDYYSLGSVSAML-HSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKL 448
DE +V ++ G+++ ++ H+ E +I +
Sbjct: 92 VGDELWVVMEFLEGGALTDIVTHTRMNEEQI----------AAVCLAVLQALSVLHAQGV 141
Query: 449 VHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG---YRAPEVTDSRKATQAS 505
+H +IKS +I L +SD G S P G + APE+
Sbjct: 142 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 201
Query: 506 DVYSFGVVLLEILTGKSP 523
D++S G++++E++ G+ P
Sbjct: 202 DIWSLGIMVIEMVDGEPP 219
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 85/198 (42%), Gaps = 16/198 (8%)
Query: 332 LGKGTFGMAYKA-ILEDGTTVVVKRLKDVNVGKRDFE-QQMEIVGSIRHENVVELKAYYY 389
+G+G+ G+ A + G V VK++ +R+ ++ I+ +HENVVE+ Y
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 390 SKDEKLMVYDYYSLGSVSAML-HSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKL 448
DE +V ++ G+++ ++ H+ E +I +
Sbjct: 219 VGDELWVVMEFLEGGALTDIVTHTRMNEEQI----------AAVCLAVLQALSVLHAQGV 268
Query: 449 VHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG---YRAPEVTDSRKATQAS 505
+H +IKS +I L +SD G S P G + APE+
Sbjct: 269 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 328
Query: 506 DVYSFGVVLLEILTGKSP 523
D++S G++++E++ G+ P
Sbjct: 329 DIWSLGIMVIEMVDGEPP 346
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 109/291 (37%), Gaps = 42/291 (14%)
Query: 332 LGKGTFGMAY--KAILEDG------TTVVVKRLKDVNVGK--RDFEQQMEIVGSI-RHEN 380
LG+G FG +AI D T V VK LK K D +ME++ I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 381 VVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEG--------RIPLDWDTXXXXXXX 432
++ L ++ +Y S G++ L + G P + +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 433 XXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG--- 489
K +H ++ + N+ + ++D GL + G
Sbjct: 156 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP 215
Query: 490 --YRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREE 546
+ APE R T SDV+SFGV+L EI T G SP +EL L++ H + +
Sbjct: 216 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPS 275
Query: 547 WTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
N E+ M++ C +P QRP +V ++ +
Sbjct: 276 --------------NCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 85/198 (42%), Gaps = 16/198 (8%)
Query: 332 LGKGTFGMAYKA-ILEDGTTVVVKRLKDVNVGKRDFE-QQMEIVGSIRHENVVELKAYYY 389
+G+G+ G+ A + G V VK++ +R+ ++ I+ +HENVVE+ Y
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 390 SKDEKLMVYDYYSLGSVSAML-HSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKL 448
DE +V ++ G+++ ++ H+ E +I +
Sbjct: 142 VGDELWVVMEFLEGGALTDIVTHTRMNEEQI----------AAVCLAVLQALSVLHAQGV 191
Query: 449 VHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG---YRAPEVTDSRKATQAS 505
+H +IKS +I L +SD G S P G + APE+
Sbjct: 192 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 251
Query: 506 DVYSFGVVLLEILTGKSP 523
D++S G++++E++ G+ P
Sbjct: 252 DIWSLGIMVIEMVDGEPP 269
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 108/272 (39%), Gaps = 29/272 (10%)
Query: 332 LGKGTFGMAYKAILEDGT-TVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYS 390
LG G +G Y+ + + + TV VK LK+ + +F ++ ++ I+H N+V+L
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 284
Query: 391 KDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVH 450
+ ++ ++ + G++ L R R ++ +H
Sbjct: 285 EPPFYIITEFMTYGNLLDYL---RECNRQEVN---AVVLLYMATQISSAMEYLEKKNFIH 338
Query: 451 GNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG----YRAPEVTDSRKATQASD 506
N+ + N + V+D GL+ + + A + APE K + SD
Sbjct: 339 RNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 398
Query: 507 VYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEEE 565
V++FGV+L EI T G SP ++ L+ D + R E+
Sbjct: 399 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--------------KDYRMERPEGCPEK 444
Query: 566 MVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
+ E+++ +C P RP ++ + E +
Sbjct: 445 VYELMR---ACWQWNPSDRPSFAEIHQAFETM 473
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 102/271 (37%), Gaps = 39/271 (14%)
Query: 330 EVLGKGTFGMA----YKAILEDGTTVVVKRLKDVNVGK----RDFEQQMEIVGSIRHENV 381
E LG G+FG+ + A +V VK LK + + DF +++ + S+ H N+
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 382 VELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXX 441
+ L + K MV + LGS+ L +G +
Sbjct: 74 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLL-------GTLSRYAVQVAEGMG 125
Query: 442 XXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTIT------SALAPVIARAAGYRAPEV 495
+ +H ++ + N+ L ++ + D GL + + APE
Sbjct: 126 YLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPES 185
Query: 496 TDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDV 554
+R + ASD + FGV L E+ T G+ P G +++H + D
Sbjct: 186 LKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI----------------DK 229
Query: 555 ELLRYPNIEEEMVEMLQIAMSCVVRMPDQRP 585
E R P E+ ++ + + C P+ RP
Sbjct: 230 EGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 260
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 89/210 (42%), Gaps = 23/210 (10%)
Query: 327 ASAEVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSI--RHENVVEL 384
A E +GKG +G ++ + G +V VK + ++ + ++ EI ++ RH+N++
Sbjct: 11 ALVECVGKGRYGEVWRGLWH-GESVAVKIFSSRD--EQSWFRETEIYNTVLLRHDNILGF 67
Query: 385 KAYYY----SKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXX 440
A S + ++ Y+ GS+ L + E + L
Sbjct: 68 IASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRL-AVSAACGLAHLHVEIF 126
Query: 441 XXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVI-------ARAAGYRAP 493
+ H + KS N+ + S C++DLGL + S + + Y AP
Sbjct: 127 GTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAP 186
Query: 494 EV------TDSRKATQASDVYSFGVVLLEI 517
EV TD ++ + +D+++FG+VL EI
Sbjct: 187 EVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA--GYRAPEVTDSRKATQA 504
++V+ ++K NI L+ + +SDLGL + R GY APEV + + T +
Sbjct: 306 RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFS 365
Query: 505 SDVYSFGVVLLEILTGKSPIH 525
D ++ G +L E++ G+SP
Sbjct: 366 PDWWALGCLLYEMIAGQSPFQ 386
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA--GYRAPEVTDSRKATQA 504
++V+ ++K NI L+ + +SDLGL + R GY APEV + + T +
Sbjct: 306 RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFS 365
Query: 505 SDVYSFGVVLLEILTGKSPIH 525
D ++ G +L E++ G+SP
Sbjct: 366 PDWWALGCLLYEMIAGQSPFQ 386
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 84/197 (42%), Gaps = 11/197 (5%)
Query: 332 LGKGTFGMAYKAILEDGTTVVVKRLKDVNVG---KRDFEQQMEIVGSIRHENVVELKAYY 388
LG G G+ +K + V+ ++L + + + ++++++ +V +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 389 YSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKL 448
YS E + ++ GS+ +L + GRIP K+
Sbjct: 74 YSDGEISICMEHMDGGSLDQVL---KKAGRIP----EQILGKVSIAVIKGLTYLREKHKI 126
Query: 449 VHGNIKSSNIFLNSQQYGCVSDLGLT-TITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
+H ++K SNI +NS+ + D G++ + ++A Y +PE + SD+
Sbjct: 127 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDI 186
Query: 508 YSFGVVLLEILTGKSPI 524
+S G+ L+E+ G+ PI
Sbjct: 187 WSMGLSLVEMAVGRYPI 203
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 93/211 (44%), Gaps = 25/211 (11%)
Query: 330 EVLGK-GTFGMAYKAILEDGTTVVVKRLKDVNVGKR--DFEQQMEIVGSIRHENVVELKA 386
E++G+ G FG YKA ++ + + ++ D + D+ +++I+ S H N+V+L
Sbjct: 15 EIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD 74
Query: 387 YYYSKDEKLMVYDYYSLGSVSA-MLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXX 445
+Y ++ ++ ++ + G+V A ML ER PL T
Sbjct: 75 AFYYENNLWILIEFCAGGAVDAVMLELER-----PL---TESQIQVVCKQTLDALNYLHD 126
Query: 446 XKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGY------RAPEV---- 495
K++H ++K+ NI ++D G++ + I R + APEV
Sbjct: 127 NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTX--IQRRDSFIGTPYWMAPEVVMCE 184
Query: 496 -TDSRKATQASDVYSFGVVLLEILTGKSPIH 525
+ R +DV+S G+ L+E+ + P H
Sbjct: 185 TSKDRPYDYKADVWSLGITLIEMAEIEPPHH 215
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 111/272 (40%), Gaps = 29/272 (10%)
Query: 332 LGKGTFGMAYKAILEDGT-TVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYS 390
LG G +G Y+ + + + TV VK LK+ + +F ++ ++ I+H N+V+L
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 391 KDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVH 450
+ ++ ++ + G++ L R R ++ +H
Sbjct: 83 EPPFYIITEFMTYGNLLDYL---RECNRQEVN---AVVLLYMATQISSAMEYLEKKNFIH 136
Query: 451 GNIKSSNIFLNSQQYGCVSDLGLTTITSA---LAPVIAR-AAGYRAPEVTDSRKATQASD 506
++ + N + V+D GL+ + + AP A+ + APE K + SD
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSD 196
Query: 507 VYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEEE 565
V++FGV+L EI T G SP ++ L+ D + R E+
Sbjct: 197 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--------------KDYRMERPEGCPEK 242
Query: 566 MVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
+ E+++ +C P RP ++ + E +
Sbjct: 243 VYELMR---ACWQWNPSDRPSFAEIHQAFETM 271
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 92/215 (42%), Gaps = 37/215 (17%)
Query: 330 EVLGKGTFGMAYKAI-LEDGTT----VVVKRLKDVNVGKRDFE---QQMEIVGSIRHENV 381
+VLG G FG +K + + +G + V +K ++D + G++ F+ M +GS+ H ++
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS-GRQSFQAVTDHMLAIGSLDHAHI 95
Query: 382 VELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGE--GRIPLDWDTXXXXXXXXXXXXXX 439
V L +L V Y LGS+ + RG ++ L+W
Sbjct: 96 VRLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG- 153
Query: 440 XXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTI----------TSALAPVIARAAG 489
+VH N+ + N+ L S V+D G+ + + A P+
Sbjct: 154 --------MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPI-----K 200
Query: 490 YRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSP 523
+ A E K T SDV+S+GV + E++T G P
Sbjct: 201 WMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEP 235
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 111/272 (40%), Gaps = 29/272 (10%)
Query: 332 LGKGTFGMAYKAILEDGT-TVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYS 390
LG G +G Y+ + + + TV VK LK+ + +F ++ ++ I+H N+V+L
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 391 KDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVH 450
+ ++ ++ + G++ L R R ++ +H
Sbjct: 82 EPPFYIITEFMTYGNLLDYL---RECNRQEVN---AVVLLYMATQISSAMEYLEKKNFIH 135
Query: 451 GNIKSSNIFLNSQQYGCVSDLGLTTITSA---LAPVIAR-AAGYRAPEVTDSRKATQASD 506
++ + N + V+D GL+ + + AP A+ + APE K + SD
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSD 195
Query: 507 VYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEEE 565
V++FGV+L EI T G SP ++ L+ D + R E+
Sbjct: 196 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--------------KDYRMERPEGCPEK 241
Query: 566 MVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
+ E+++ +C P RP ++ + E +
Sbjct: 242 VYELMR---ACWQWNPSDRPSFAEIHQAFETM 270
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 92/215 (42%), Gaps = 37/215 (17%)
Query: 330 EVLGKGTFGMAYKAI-LEDGTT----VVVKRLKDVNVGKRDFE---QQMEIVGSIRHENV 381
+VLG G FG +K + + +G + V +K ++D + G++ F+ M +GS+ H ++
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS-GRQSFQAVTDHMLAIGSLDHAHI 77
Query: 382 VELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGE--GRIPLDWDTXXXXXXXXXXXXXX 439
V L +L V Y LGS+ + RG ++ L+W
Sbjct: 78 VRLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG- 135
Query: 440 XXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTI----------TSALAPVIARAAG 489
+VH N+ + N+ L S V+D G+ + + A P+
Sbjct: 136 --------MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPI-----K 182
Query: 490 YRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSP 523
+ A E K T SDV+S+GV + E++T G P
Sbjct: 183 WMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEP 217
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 108/272 (39%), Gaps = 29/272 (10%)
Query: 332 LGKGTFGMAYKAILEDGT-TVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYS 390
LG G FG Y+ + + + TV VK LK+ + +F ++ ++ I+H N+V+L
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 391 KDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVH 450
+ ++ ++ + G++ L R R + + +H
Sbjct: 79 EPPFYIITEFMTYGNLLDYL---RECNRQEV---SAVVLLYMATQISSAMEYLEKKNFIH 132
Query: 451 GNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA----GYRAPEVTDSRKATQASD 506
++ + N + V+D GL+ + + A + APE K + SD
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSD 192
Query: 507 VYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEEE 565
V++FGV+L EI T G SP ++ L+ D + R E+
Sbjct: 193 VWAFGVLLWEIATYGMSPYPGIDPSQVYELLE--------------KDYRMERPEGCPEK 238
Query: 566 MVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
+ E+++ +C P RP ++ + E +
Sbjct: 239 VYELMR---ACWQWNPSDRPSFAEIHQAFETM 267
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 94/221 (42%), Gaps = 35/221 (15%)
Query: 332 LGKGTFGMAYKAILEDGTT---VVVKRL----KDVNVGKRDFEQQMEIVGSIRHENVVEL 384
+G G +G A+ DG T V +K+L + KR + +++ ++ +RHENV+ L
Sbjct: 33 VGSGAYGAVCSAV--DGRTGAKVAIKKLYRPFQSELFAKRAY-RELRLLKHMRHENVIGL 89
Query: 385 KAYYYSKDEKLMVY-DYY--------SLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXX 435
+ + DE L + D+Y LG + M H + GE RI
Sbjct: 90 LDVF-TPDETLDDFTDFYLVMPFMGTDLGKL--MKHEKLGEDRIQF----------LVYQ 136
Query: 436 XXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEV 495
++H ++K N+ +N + D GL + YRAPEV
Sbjct: 137 MLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTRWYRAPEV 196
Query: 496 T-DSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHL 535
+ + TQ D++S G ++ E++TGK+ G D L L
Sbjct: 197 ILNWMRYTQTVDIWSVGCIMAEMITGKTLF--KGSDHLDQL 235
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 102/271 (37%), Gaps = 39/271 (14%)
Query: 330 EVLGKGTFGMA----YKAILEDGTTVVVKRLKDVNVGK----RDFEQQMEIVGSIRHENV 381
E LG G+FG+ + A +V VK LK + + DF +++ + S+ H N+
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 382 VELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXX 441
+ L + K MV + LGS+ L +G +
Sbjct: 78 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLL-------GTLSRYAVQVAEGMG 129
Query: 442 XXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITS------ALAPVIARAAGYRAPEV 495
+ +H ++ + N+ L ++ + D GL + + APE
Sbjct: 130 YLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES 189
Query: 496 TDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDV 554
+R + ASD + FGV L E+ T G+ P G +++H + D
Sbjct: 190 LKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI----------------DK 233
Query: 555 ELLRYPNIEEEMVEMLQIAMSCVVRMPDQRP 585
E R P E+ ++ + + C P+ RP
Sbjct: 234 EGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 264
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 102/271 (37%), Gaps = 39/271 (14%)
Query: 330 EVLGKGTFGMA----YKAILEDGTTVVVKRLKDVNVGK----RDFEQQMEIVGSIRHENV 381
E LG G+FG+ + A +V VK LK + + DF +++ + S+ H N+
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 382 VELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXX 441
+ L + K MV + LGS+ L +G +
Sbjct: 74 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLL-------GTLSRYAVQVAEGMG 125
Query: 442 XXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITS------ALAPVIARAAGYRAPEV 495
+ +H ++ + N+ L ++ + D GL + + APE
Sbjct: 126 YLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES 185
Query: 496 TDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDV 554
+R + ASD + FGV L E+ T G+ P G +++H + D
Sbjct: 186 LKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI----------------DK 229
Query: 555 ELLRYPNIEEEMVEMLQIAMSCVVRMPDQRP 585
E R P E+ ++ + + C P+ RP
Sbjct: 230 EGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 260
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 92/204 (45%), Gaps = 25/204 (12%)
Query: 330 EVLGKGTFGMAYKAILEDGTTVVVKRLK----DVNVGKRDFEQQMEIVGSIRHENVVELK 385
E +G+GT+G+ YKA G V +KR++ D + +++ ++ + H N+V L
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAI-REISLLKELHHPNIVSLI 85
Query: 386 AYYYSKDEKLMVYDYYSLGSVSAMLHSERG--EGRIPLDWDTXXXXXXXXXXXXXXXXXX 443
+S+ +V+++ + ++ G + +I +
Sbjct: 86 DVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKI----------YLYQLLRGVAHC 135
Query: 444 XXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTT-----ITSALAPVIARAAGYRAPEV-TD 497
+++H ++K N+ +NS ++D GL + S V+ YRAP+V
Sbjct: 136 HQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVT--LWYRAPDVLMG 193
Query: 498 SRKATQASDVYSFGVVLLEILTGK 521
S+K + + D++S G + E++TGK
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 86/198 (43%), Gaps = 16/198 (8%)
Query: 332 LGKGTFGMAYKAILED-GTTVVVKRLKDVNVGKRDFE-QQMEIVGSIRHENVVELKAYYY 389
+G+G+ G+ A + G V VK++ +R+ ++ I+ H+NVV++ + Y
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 390 SKDEKLMVYDYYSLGSVSAML-HSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKL 448
DE +V ++ G+++ ++ H+ E +I +
Sbjct: 113 VGDELWVVMEFLEGGALTDIVTHTRMNEEQI----------ATVCLSVLRALSYLHNQGV 162
Query: 449 VHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG---YRAPEVTDSRKATQAS 505
+H +IKS +I L S +SD G S P G + APEV
Sbjct: 163 IHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEV 222
Query: 506 DVYSFGVVLLEILTGKSP 523
D++S G++++E++ G+ P
Sbjct: 223 DIWSLGIMVIEMIDGEPP 240
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 92/204 (45%), Gaps = 25/204 (12%)
Query: 330 EVLGKGTFGMAYKAILEDGTTVVVKRLK----DVNVGKRDFEQQMEIVGSIRHENVVELK 385
E +G+GT+G+ YKA G V +KR++ D + +++ ++ + H N+V L
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAI-REISLLKELHHPNIVSLI 85
Query: 386 AYYYSKDEKLMVYDYYSLGSVSAMLHSERG--EGRIPLDWDTXXXXXXXXXXXXXXXXXX 443
+S+ +V+++ + ++ G + +I +
Sbjct: 86 DVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKI----------YLYQLLRGVAHC 135
Query: 444 XXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTT-----ITSALAPVIARAAGYRAPEV-TD 497
+++H ++K N+ +NS ++D GL + S V+ YRAP+V
Sbjct: 136 HQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVT--LWYRAPDVLMG 193
Query: 498 SRKATQASDVYSFGVVLLEILTGK 521
S+K + + D++S G + E++TGK
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVI-ARAAG-----YRAPEVTDSRKA 501
VH ++ + N+ L +Q Y +SD GL+ A A+ G + APE + K
Sbjct: 148 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 207
Query: 502 TQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLV 536
+ SDV+SFGV++ E + G+ P G E+ ++
Sbjct: 208 SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML 243
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVI-ARAAG-----YRAPEVTDSRKA 501
VH ++ + N+ L +Q Y +SD GL+ A A+ G + APE + K
Sbjct: 148 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 207
Query: 502 TQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLV 536
+ SDV+SFGV++ E + G+ P G E+ ++
Sbjct: 208 SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML 243
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 88/218 (40%), Gaps = 22/218 (10%)
Query: 330 EVLGKGTFGMAYKAIL----EDGTTVVVKRL-KDVNVGKRDFEQ---QMEIVGSIRHENV 381
++LGKGTFG K IL G +K L K+V + K + + ++ + RH +
Sbjct: 16 KLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 72
Query: 382 VELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXX 441
LK + + D V +Y + G + L ER T
Sbjct: 73 TALKYAFQTHDRLCFVMEYANGGELFFHLSRERVF--------TEERARFYGAEIVSALE 124
Query: 442 XXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG---YRAPEVTDS 498
+V+ +IK N+ L+ + ++D GL + + G Y APEV +
Sbjct: 125 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLED 184
Query: 499 RKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLV 536
+A D + GVV+ E++ G+ P + + L L+
Sbjct: 185 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI 222
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVI-ARAAG-----YRAPEVTDSRKA 501
VH ++ + N+ L +Q Y +SD GL+ A A+ G + APE + K
Sbjct: 132 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 191
Query: 502 TQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLV 536
+ SDV+SFGV++ E + G+ P G E+ ++
Sbjct: 192 SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML 227
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVI-ARAAG-----YRAPEVTDSRKA 501
VH ++ + N+ L +Q Y +SD GL+ A A+ G + APE + K
Sbjct: 128 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 187
Query: 502 TQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLV 536
+ SDV+SFGV++ E + G+ P G E+ ++
Sbjct: 188 SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML 223
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVI-ARAAG-----YRAPEVTDSRKA 501
VH ++ + N+ L +Q Y +SD GL+ A A+ G + APE + K
Sbjct: 126 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 185
Query: 502 TQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLV 536
+ SDV+SFGV++ E + G+ P G E+ ++
Sbjct: 186 SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML 221
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 83/216 (38%), Gaps = 26/216 (12%)
Query: 332 LGKGTFGMAYKAILEDGTTVV-VKRLKDVNVGKRDFEQQM----EIVGSIRHENVVELKA 386
LGKG FG Y A + ++ +K L + K E Q+ EI +RH N++ +
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXX 446
Y++ + ++ ++ G + L GR
Sbjct: 83 YFHDRKRIYLMLEFAPRGELYKELQKH---GRF-----DEQRSATFMEELADALHYCHER 134
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIAR-----AAGYRAPEVTDSRKA 501
K++H +IK N+ + + ++D G S AP + R Y PE+ + +
Sbjct: 135 KVIHRDIKPENLLMGYKGELKIADFGW----SVHAPSLRRRXMCGTLDYLPPEMIEGKTH 190
Query: 502 TQASDVYSFGVVLLEILTG----KSPIHTTGGDELV 533
+ D++ GV+ E L G SP HT +V
Sbjct: 191 DEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV 226
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 85/204 (41%), Gaps = 24/204 (11%)
Query: 330 EVLGKGTFGMAYKAI-LEDGTTV---VVKRLKDVNVGKR---DFEQQMEIVGSIRHENVV 382
+VLG G FG YK I + +G TV V ++ + G + +F + I+ S+ H ++V
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 383 ELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGE--GRIPLDWDTXXXXXXXXXXXXXXX 440
L S +L V G + +H + ++ L+W
Sbjct: 104 RLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNW---------CVQIAKGM 153
Query: 441 XXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-----YRAPEV 495
+LVH ++ + N+ + S + ++D GL + G + A E
Sbjct: 154 MYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC 213
Query: 496 TDSRKATQASDVYSFGVVLLEILT 519
RK T SDV+S+GV + E++T
Sbjct: 214 IHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVI-ARAAG-----YRAPEVTDSRKA 501
VH ++ + N+ L +Q Y +SD GL+ A A+ G + APE + K
Sbjct: 138 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 197
Query: 502 TQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLV 536
+ SDV+SFGV++ E + G+ P G E+ ++
Sbjct: 198 SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML 233
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 85/204 (41%), Gaps = 24/204 (11%)
Query: 330 EVLGKGTFGMAYKAI-LEDGTTV---VVKRLKDVNVGKR---DFEQQMEIVGSIRHENVV 382
+VLG G FG YK I + +G TV V ++ + G + +F + I+ S+ H ++V
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 383 ELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGE--GRIPLDWDTXXXXXXXXXXXXXXX 440
L S +L V G + +H + ++ L+W
Sbjct: 81 RLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNW---------CVQIAKGM 130
Query: 441 XXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-----YRAPEV 495
+LVH ++ + N+ + S + ++D GL + G + A E
Sbjct: 131 MYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC 190
Query: 496 TDSRKATQASDVYSFGVVLLEILT 519
RK T SDV+S+GV + E++T
Sbjct: 191 IHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVI-ARAAG-----YRAPEVTDSRKA 501
VH ++ + N+ L +Q Y +SD GL+ A A+ G + APE + K
Sbjct: 146 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 205
Query: 502 TQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLV 536
+ SDV+SFGV++ E + G+ P G E+ ++
Sbjct: 206 SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML 241
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 88/218 (40%), Gaps = 22/218 (10%)
Query: 330 EVLGKGTFGMAYKAIL----EDGTTVVVKRL-KDVNVGKRDFEQ---QMEIVGSIRHENV 381
++LGKGTFG K IL G +K L K+V + K + + ++ + RH +
Sbjct: 11 KLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 382 VELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXX 441
LK + + D V +Y + G + L ER T
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGELFFHLSRERVF--------TEERARFYGAEIVSALE 119
Query: 442 XXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG---YRAPEVTDS 498
+V+ +IK N+ L+ + ++D GL + + G Y APEV +
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLED 179
Query: 499 RKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLV 536
+A D + GVV+ E++ G+ P + + L L+
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI 217
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 89/232 (38%), Gaps = 30/232 (12%)
Query: 316 NYAFDLEDLLRASAEVLGKGTFGMAYKAILEDGTTVV-VKRLKDVNVGKRDFEQQM---- 370
+ D D++R LGKG FG Y A + ++ +K L + K E Q+
Sbjct: 10 KFTIDDFDIVRP----LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREI 65
Query: 371 EIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXX 430
EI +RH N++ + Y++ + ++ ++ G + L GR
Sbjct: 66 EIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH---GRF-----DEQRSA 117
Query: 431 XXXXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIAR---- 486
K++H +IK N+ + + ++D G S AP + R
Sbjct: 118 TFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGW----SVHAPSLRRRXMC 173
Query: 487 -AAGYRAPEVTDSRKATQASDVYSFGVVLLEILTG----KSPIHTTGGDELV 533
Y PE+ + + + D++ GV+ E L G SP HT +V
Sbjct: 174 GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV 225
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 88/218 (40%), Gaps = 22/218 (10%)
Query: 330 EVLGKGTFGMAYKAIL----EDGTTVVVKRL-KDVNVGKRDFEQ---QMEIVGSIRHENV 381
++LGKGTFG K IL G +K L K+V + K + + ++ + RH +
Sbjct: 11 KLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 382 VELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXX 441
LK + + D V +Y + G + L ER T
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGELFFHLSRERVF--------TEERARFYGAEIVSALE 119
Query: 442 XXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG---YRAPEVTDS 498
+V+ +IK N+ L+ + ++D GL + + G Y APEV +
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLED 179
Query: 499 RKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLV 536
+A D + GVV+ E++ G+ P + + L L+
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI 217
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 83/216 (38%), Gaps = 26/216 (12%)
Query: 332 LGKGTFGMAYKAILEDGTTVV-VKRLKDVNVGKRDFEQQM----EIVGSIRHENVVELKA 386
LGKG FG Y A + ++ +K L + K E Q+ EI +RH N++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXX 446
Y++ + ++ ++ G + L GR
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKH---GRF-----DEQRSATFMEELADALHYCHER 133
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIAR-----AAGYRAPEVTDSRKA 501
K++H +IK N+ + + ++D G S AP + R Y PE+ + +
Sbjct: 134 KVIHRDIKPENLLMGYKGELKIADFGW----SVHAPSLRRRXMCGTLDYLPPEMIEGKTH 189
Query: 502 TQASDVYSFGVVLLEILTG----KSPIHTTGGDELV 533
+ D++ GV+ E L G SP HT +V
Sbjct: 190 DEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV 225
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 108/278 (38%), Gaps = 33/278 (11%)
Query: 314 GCNYAFDLEDLLRASAEVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIV 373
G ++ D +DL + LG G FG+ V +K +K+ ++ + +F ++ +++
Sbjct: 1 GGSWEIDPKDL--TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVM 58
Query: 374 GSIRHENVVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXX 433
++ HE +V+L + ++ +Y + G + L R +
Sbjct: 59 MNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQ-------TQQLLEMC 111
Query: 434 XXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGY--- 490
+ +H ++ + N +N Q VSD GL+ +R + +
Sbjct: 112 KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVR 171
Query: 491 -RAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWT 548
PEV K + SD+++FGV++ EI + GK P E T
Sbjct: 172 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE----------------T 215
Query: 549 AEVFDVELLRY-PNIEEEMVEMLQIAMSCVVRMPDQRP 585
AE L Y P++ E V I SC D+RP
Sbjct: 216 AEHIAQGLRLYRPHLASEKV--YTIMYSCWHEKADERP 251
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 88/218 (40%), Gaps = 22/218 (10%)
Query: 330 EVLGKGTFGMAYKAIL----EDGTTVVVKRL-KDVNVGKRDFEQ---QMEIVGSIRHENV 381
++LGKGTFG K IL G +K L K+V + K + + ++ + RH +
Sbjct: 11 KLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 382 VELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXX 441
LK + + D V +Y + G + L ER T
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGELFFHLSRERVF--------TEERARFYGAEIVSALE 119
Query: 442 XXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG---YRAPEVTDS 498
+V+ +IK N+ L+ + ++D GL + + G Y APEV +
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLED 179
Query: 499 RKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLV 536
+A D + GVV+ E++ G+ P + + L L+
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI 217
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVI-ARAAG-----YRAPEVTDSRKA 501
VH ++ + N+ L +Q Y +SD GL+ A A+ G + APE + K
Sbjct: 132 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKF 191
Query: 502 TQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLV 536
+ SDV+SFGV++ E + G+ P G E+ ++
Sbjct: 192 SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML 227
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 88/218 (40%), Gaps = 22/218 (10%)
Query: 330 EVLGKGTFGMAYKAIL----EDGTTVVVKRL-KDVNVGKRDFEQ---QMEIVGSIRHENV 381
++LGKGTFG K IL G +K L K+V + K + + ++ + RH +
Sbjct: 11 KLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 382 VELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXX 441
LK + + D V +Y + G + L ER T
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGELFFHLSRERVF--------TEERARFYGAEIVSALE 119
Query: 442 XXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG---YRAPEVTDS 498
+V+ +IK N+ L+ + ++D GL + + G Y APEV +
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLED 179
Query: 499 RKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLV 536
+A D + GVV+ E++ G+ P + + L L+
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI 217
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 108/272 (39%), Gaps = 29/272 (10%)
Query: 332 LGKGTFGMAYKAILEDGT-TVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYS 390
LG G +G Y+ + + + TV VK LK+ + +F ++ ++ I+H N+V+L
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 391 KDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVH 450
+ ++ ++ + G++ L R R + + +H
Sbjct: 79 EPPFYIIIEFMTYGNLLDYL---RECNRQEV---SAVVLLYMATQISSAMEYLEKKNFIH 132
Query: 451 GNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG----YRAPEVTDSRKATQASD 506
++ + N + V+D GL+ + + A + APE K + SD
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSD 192
Query: 507 VYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEEE 565
V++FGV+L EI T G SP ++ L+ D + R E+
Sbjct: 193 VWAFGVLLWEIATYGMSPYPGIDPSQVYELLE--------------KDYRMERPEGCPEK 238
Query: 566 MVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
+ E+++ +C P RP ++ + E +
Sbjct: 239 VYELMR---ACWQWNPSDRPSFAEIHQAFETM 267
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 88/218 (40%), Gaps = 22/218 (10%)
Query: 330 EVLGKGTFGMAYKAIL----EDGTTVVVKRL-KDVNVGKRDFEQ---QMEIVGSIRHENV 381
++LGKGTFG K IL G +K L K+V + K + + ++ + RH +
Sbjct: 14 KLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 70
Query: 382 VELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXX 441
LK + + D V +Y + G + L ER T
Sbjct: 71 TALKYAFQTHDRLCFVMEYANGGELFFHLSRERVF--------TEERARFYGAEIVSALE 122
Query: 442 XXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG---YRAPEVTDS 498
+V+ +IK N+ L+ + ++D GL + + G Y APEV +
Sbjct: 123 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLED 182
Query: 499 RKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLV 536
+A D + GVV+ E++ G+ P + + L L+
Sbjct: 183 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI 220
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 88/218 (40%), Gaps = 22/218 (10%)
Query: 330 EVLGKGTFGMAYKAIL----EDGTTVVVKRL-KDVNVGKRDFEQ---QMEIVGSIRHENV 381
++LGKGTFG K IL G +K L K+V + K + + ++ + RH +
Sbjct: 11 KLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 382 VELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXX 441
LK + + D V +Y + G + L ER T
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGELFFHLSRERVF--------TEERARFYGAEIVSALE 119
Query: 442 XXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG---YRAPEVTDS 498
+V+ +IK N+ L+ + ++D GL + + G Y APEV +
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLED 179
Query: 499 RKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLV 536
+A D + GVV+ E++ G+ P + + L L+
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI 217
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 108/272 (39%), Gaps = 29/272 (10%)
Query: 332 LGKGTFGMAYKAILEDGT-TVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYS 390
LG G +G Y+ + + + TV VK LK+ + +F ++ ++ I+H N+V+L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 391 KDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVH 450
+ ++ ++ + G++ L R R ++ +H
Sbjct: 86 EPPFYIITEFMTYGNLLDYL---RECNRQEVN---AVVLLYMATQISSAMEYLEKKNFIH 139
Query: 451 GNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA----GYRAPEVTDSRKATQASD 506
++ + N + V+D GL+ + + A + APE K + SD
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSD 199
Query: 507 VYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEEE 565
V++FGV+L EI T G SP ++ L+ D + R E+
Sbjct: 200 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--------------KDYRMERPEGCPEK 245
Query: 566 MVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
+ E+++ +C P RP ++ + E +
Sbjct: 246 VYELMR---ACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 82/201 (40%), Gaps = 17/201 (8%)
Query: 332 LGKGTFGMAYKAI-LEDGTTVVVKRL----KDVNVGKRDFEQQMEIVGSIRHENVVELKA 386
+G G+FG Y A + + V +K++ K N +D +++ + +RH N ++ +
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXX 446
Y + +V +Y LGS S +L + PL
Sbjct: 83 CYLREHTAWLVMEY-CLGSASDLLEVHKK----PL---QEVEIAAVTHGALQGLAYLHSH 134
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEV---TDSRKATQ 503
++H ++K+ NI L+ + D G +I A A + APEV D +
Sbjct: 135 NMIHRDVKAGNILLSEPGLVKLGDFGSASIM-APANXFVGTPYWMAPEVILAMDEGQYDG 193
Query: 504 ASDVYSFGVVLLEILTGKSPI 524
DV+S G+ +E+ K P+
Sbjct: 194 KVDVWSLGITCIELAERKPPL 214
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 82/201 (40%), Gaps = 17/201 (8%)
Query: 332 LGKGTFGMAYKAI-LEDGTTVVVKRL----KDVNVGKRDFEQQMEIVGSIRHENVVELKA 386
+G G+FG Y A + + V +K++ K N +D +++ + +RH N ++ +
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXX 446
Y + +V +Y LGS S +L + PL
Sbjct: 122 CYLREHTAWLVMEY-CLGSASDLLEVHKK----PLQ---EVEIAAVTHGALQGLAYLHSH 173
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEV---TDSRKATQ 503
++H ++K+ NI L+ + D G +I A A + APEV D +
Sbjct: 174 NMIHRDVKAGNILLSEPGLVKLGDFGSASIM-APANXFVGTPYWMAPEVILAMDEGQYDG 232
Query: 504 ASDVYSFGVVLLEILTGKSPI 524
DV+S G+ +E+ K P+
Sbjct: 233 KVDVWSLGITCIELAERKPPL 253
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 108/279 (38%), Gaps = 35/279 (12%)
Query: 332 LGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSK 391
LG G FG+ V +K +K+ ++ + +F ++ +++ ++ HE +V+L +
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 91
Query: 392 DEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVHG 451
++ +Y + G + L R + + +H
Sbjct: 92 RPIFIITEYMANGCLLNYLREMRHRFQ-------TQQLLEMCKDVCEAMEYLESKQFLHR 144
Query: 452 NIKSSNIFLNSQQYGCVSDLGLT------TITSALAPVIARAAGYRAPEVTDSRKATQAS 505
++ + N +N Q VSD GL+ TS++ + PEV K + S
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFP--VRWSPPEVLMYSKFSSKS 202
Query: 506 DVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRY-PNIE 563
D+++FGV++ EI + GK P E TAE L Y P++
Sbjct: 203 DIWAFGVLMWEIYSLGKMPYERFTNSE----------------TAEHIAQGLRLYRPHLA 246
Query: 564 EEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPNDS 602
E V I SC D+RP ++ I +V +S
Sbjct: 247 SEKV--YTIMYSCWHEKADERPTFKILLSNILDVMDEES 283
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 108/279 (38%), Gaps = 35/279 (12%)
Query: 332 LGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSK 391
LG G FG+ V +K +K+ ++ + +F ++ +++ ++ HE +V+L +
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 91
Query: 392 DEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVHG 451
++ +Y + G + L R + + +H
Sbjct: 92 RPIFIITEYMANGCLLNYLREMRHRFQ-------TQQLLEMCKDVCEAMEYLESKQFLHR 144
Query: 452 NIKSSNIFLNSQQYGCVSDLGLTTI------TSALAPVIARAAGYRAPEVTDSRKATQAS 505
++ + N +N Q VSD GL+ TS++ + PEV K + S
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFP--VRWSPPEVLMYSKFSSKS 202
Query: 506 DVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRY-PNIE 563
D+++FGV++ EI + GK P E TAE L Y P++
Sbjct: 203 DIWAFGVLMWEIYSLGKMPYERFTNSE----------------TAEHIAQGLRLYRPHLA 246
Query: 564 EEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPNDS 602
E V I SC D+RP ++ I +V +S
Sbjct: 247 SEKV--YTIMYSCWHEKADERPTFKILLSNILDVMDEES 283
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 108/272 (39%), Gaps = 29/272 (10%)
Query: 332 LGKGTFGMAYKAILEDGT-TVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYS 390
LG G +G Y+ + + + TV VK LK+ + +F ++ ++ I+H N+V+L
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 391 KDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVH 450
+ ++ ++ + G++ L R R ++ +H
Sbjct: 82 EPPFYIIIEFMTYGNLLDYL---RECNRQEVN---AVVLLYMATQISSAMEYLEKKNFIH 135
Query: 451 GNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA----GYRAPEVTDSRKATQASD 506
++ + N + V+D GL+ + + A + APE K + SD
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSD 195
Query: 507 VYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEEE 565
V++FGV+L EI T G SP ++ L+ D + R E+
Sbjct: 196 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--------------KDYRMERPEGCPEK 241
Query: 566 MVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
+ E+++ +C P RP ++ + E +
Sbjct: 242 VYELMR---ACWQWNPSDRPSFAEIHQAFETM 270
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/202 (19%), Positives = 82/202 (40%), Gaps = 13/202 (6%)
Query: 331 VLGKGTFGMAYKA-ILEDGTTVVVKRLK-DVNVGKRDFEQQME---IVGSIRHENVVELK 385
LG G+FG + +G +K LK ++ V + E + ++ + H ++ +
Sbjct: 13 TLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMW 72
Query: 386 AYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXX 445
+ + M+ DY G + ++L R R P
Sbjct: 73 GTFQDAQQIFMIMDYIEGGELFSLL---RKSQRFP-----NPVAKFYAAEVCLALEYLHS 124
Query: 446 XKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQAS 505
+++ ++K NI L+ + ++D G + + Y APEV ++ ++
Sbjct: 125 KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLCGTPDYIAPEVVSTKPYNKSI 184
Query: 506 DVYSFGVVLLEILTGKSPIHTT 527
D +SFG+++ E+L G +P + +
Sbjct: 185 DWWSFGILIYEMLAGYTPFYDS 206
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 99/236 (41%), Gaps = 25/236 (10%)
Query: 319 FDLEDLLRASAEVLGKGTFGMAYKAILEDGTTVVVKRLKDVN--VGKRDFEQQMEIVGSI 376
+D D+L E LG G FG+ ++ + + V V + + + K + ++ I+ +
Sbjct: 50 YDYYDIL----EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQL 105
Query: 377 RHENVVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWD-TXXXXXXXXXX 435
H ++ L + K E +++ ++ S G + + +E D+ +
Sbjct: 106 HHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAE--------DYKMSEAEVINYMRQ 157
Query: 436 XXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVS--DLGLTTITS--ALAPVIARAAGYR 491
+VH +IK NI +++ V D GL T + + V A +
Sbjct: 158 ACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFA 217
Query: 492 APEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEW 547
APE+ D +D+++ GV+ +L+G SP G D+L L +V R +W
Sbjct: 218 APEIVDREPVGFYTDMWAIGVLGYVLLSGLSPF--AGEDDLETL----QNVKRCDW 267
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 108/279 (38%), Gaps = 35/279 (12%)
Query: 332 LGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSK 391
LG G FG+ V +K +K+ ++ + +F ++ +++ ++ HE +V+L +
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 75
Query: 392 DEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVHG 451
++ +Y + G + L R + + +H
Sbjct: 76 RPIFIITEYMANGCLLNYLREMRHRFQ-------TQQLLEMCKDVCEAMEYLESKQFLHR 128
Query: 452 NIKSSNIFLNSQQYGCVSDLGLT------TITSALAPVIARAAGYRAPEVTDSRKATQAS 505
++ + N +N Q VSD GL+ TS++ + PEV K + S
Sbjct: 129 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFP--VRWSPPEVLMYSKFSSKS 186
Query: 506 DVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRY-PNIE 563
D+++FGV++ EI + GK P E TAE L Y P++
Sbjct: 187 DIWAFGVLMWEIYSLGKMPYERFTNSE----------------TAEHIAQGLRLYRPHLA 230
Query: 564 EEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPNDS 602
E V I SC D+RP ++ I +V +S
Sbjct: 231 SEKV--YTIMYSCWHEKADERPTFKILLSNILDVMDEES 267
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 108/272 (39%), Gaps = 29/272 (10%)
Query: 332 LGKGTFGMAYKAILEDGT-TVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYS 390
LG G +G Y+ + + + TV VK LK+ + +F ++ ++ I+H N+V+L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 391 KDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVH 450
+ ++ ++ + G++ L R R ++ +H
Sbjct: 86 EPPFYIIIEFMTYGNLLDYL---RECNRQEVN---AVVLLYMATQISSAMEYLEKKNFIH 139
Query: 451 GNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA----GYRAPEVTDSRKATQASD 506
++ + N + V+D GL+ + + A + APE K + SD
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 199
Query: 507 VYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEEE 565
V++FGV+L EI T G SP ++ L+ D + R E+
Sbjct: 200 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--------------KDYRMERPEGCPEK 245
Query: 566 MVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
+ E+++ +C P RP ++ + E +
Sbjct: 246 VYELMR---ACWQWNPSDRPSFAEIHQAFETM 274
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 108/272 (39%), Gaps = 29/272 (10%)
Query: 332 LGKGTFGMAYKAILEDGT-TVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYS 390
LG G +G Y+ + + + TV VK LK+ + +F ++ ++ I+H N+V+L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 391 KDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVH 450
+ ++ ++ + G++ L R R ++ +H
Sbjct: 86 EPPFYIITEFMTYGNLLDYL---RECNRQEVN---AVVLLYMATQISSAMEYLEKKNFIH 139
Query: 451 GNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA----GYRAPEVTDSRKATQASD 506
++ + N + V+D GL+ + + A + APE K + SD
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 199
Query: 507 VYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEEE 565
V++FGV+L EI T G SP ++ L+ D + R E+
Sbjct: 200 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--------------KDYRMERPEGCPEK 245
Query: 566 MVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
+ E+++ +C P RP ++ + E +
Sbjct: 246 VYELMR---ACWQWNPSDRPSFAEIHQAFETM 274
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 118/296 (39%), Gaps = 31/296 (10%)
Query: 310 FFFEGC-NY-AFDLEDLLRASAEVLGKGTFGMAYKAILEDGT-TVVVKRLKDVNVGKRDF 366
+F+G NY +++E LG G +G Y+ + + + TV VK LK+ + +F
Sbjct: 10 LYFQGSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF 69
Query: 367 EQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTX 426
++ ++ I+H N+V+L + ++ ++ + G++ L R R ++
Sbjct: 70 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVN---A 123
Query: 427 XXXXXXXXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIAR 486
+H ++ + N + V+D GL+ + +
Sbjct: 124 VVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 183
Query: 487 AA----GYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHS 541
A + APE K + SDV++FGV+L EI T G SP ++ L+
Sbjct: 184 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE---- 239
Query: 542 VVREEWTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
D + R E++ E+++ +C P RP ++ + E +
Sbjct: 240 ----------KDYRMERPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETM 282
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 108/279 (38%), Gaps = 35/279 (12%)
Query: 332 LGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSK 391
LG G FG+ V +K +K+ ++ + +F ++ +++ ++ HE +V+L +
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 82
Query: 392 DEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVHG 451
++ +Y + G + L R + + +H
Sbjct: 83 RPIFIITEYMANGCLLNYLREMRHRFQ-------TQQLLEMCKDVCEAMEYLESKQFLHR 135
Query: 452 NIKSSNIFLNSQQYGCVSDLGLT------TITSALAPVIARAAGYRAPEVTDSRKATQAS 505
++ + N +N Q VSD GL+ TS++ + PEV K + S
Sbjct: 136 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFP--VRWSPPEVLMYSKFSSKS 193
Query: 506 DVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRY-PNIE 563
D+++FGV++ EI + GK P E TAE L Y P++
Sbjct: 194 DIWAFGVLMWEIYSLGKMPYERFTNSE----------------TAEHIAQGLRLYRPHLA 237
Query: 564 EEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPNDS 602
E V I SC D+RP ++ I +V +S
Sbjct: 238 SEKV--YTIMYSCWHEKADERPTFKILLSNILDVMDEES 274
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 108/272 (39%), Gaps = 29/272 (10%)
Query: 332 LGKGTFGMAYKAILEDGT-TVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYS 390
LG G +G Y+ + + + TV VK LK+ + +F ++ ++ I+H N+V+L
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 84
Query: 391 KDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVH 450
+ ++ ++ + G++ L R R ++ +H
Sbjct: 85 EPPFYIITEFMTYGNLLDYL---RECNRQEVN---AVVLLYMATQISSAMEYLEKKNFIH 138
Query: 451 GNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA----GYRAPEVTDSRKATQASD 506
++ + N + V+D GL+ + + A + APE K + SD
Sbjct: 139 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 198
Query: 507 VYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEEE 565
V++FGV+L EI T G SP ++ L+ D + R E+
Sbjct: 199 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--------------KDYRMERPEGCPEK 244
Query: 566 MVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
+ E+++ +C P RP ++ + E +
Sbjct: 245 VYELMR---ACWQWNPSDRPSFAEIHQAFETM 273
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 108/272 (39%), Gaps = 29/272 (10%)
Query: 332 LGKGTFGMAYKAILEDGT-TVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYS 390
LG G +G Y+ + + + TV VK LK+ + +F ++ ++ I+H N+V+L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 391 KDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVH 450
+ ++ ++ + G++ L R R ++ +H
Sbjct: 81 EPPFYIITEFMTYGNLLDYL---RECNRQEVN---AVVLLYMATQISSAMEYLEKKNFIH 134
Query: 451 GNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA----GYRAPEVTDSRKATQASD 506
++ + N + V+D GL+ + + A + APE K + SD
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 507 VYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEEE 565
V++FGV+L EI T G SP ++ L+ D + R E+
Sbjct: 195 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--------------KDYRMERPEGCPEK 240
Query: 566 MVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
+ E+++ +C P RP ++ + E +
Sbjct: 241 VYELMR---ACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 108/272 (39%), Gaps = 29/272 (10%)
Query: 332 LGKGTFGMAYKAILEDGT-TVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYS 390
LG G +G Y+ + + + TV VK LK+ + +F ++ ++ I+H N+V+L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 391 KDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVH 450
+ ++ ++ + G++ L R R + + +H
Sbjct: 81 EPPFYIIIEFMTYGNLLDYL---RECNRQEV---SAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 451 GNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA----GYRAPEVTDSRKATQASD 506
++ + N + V+D GL+ + + A + APE K + SD
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 507 VYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEEE 565
V++FGV+L EI T G SP ++ L+ D + R E+
Sbjct: 195 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--------------KDYRMERPEGCPEK 240
Query: 566 MVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
+ E+++ +C P RP ++ + E +
Sbjct: 241 VYELMR---ACWQWNPSDRPSFAEIHQAFETM 269
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 84/204 (41%), Gaps = 26/204 (12%)
Query: 332 LGKGTFGMAYKAILE---DGT--TVVVKRLKDVNVG---KRDFEQQMEIVGSIRHENVVE 383
LG+G FG + DGT V VK LK+ G + +++++EI+ ++ HE++V+
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKE-GCGPQLRSGWQREIEILRTLYHEHIVK 75
Query: 384 LKAYYYSKDEK--LMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXX 441
K + EK +V +Y LGS+ L P
Sbjct: 76 YKGCCEDQGEKSVQLVMEYVPLGSLRDYL---------PRHCVGLAQLLLFAQQICEGMA 126
Query: 442 XXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLT-TITSALAPVIARAAG-----YRAPEV 495
+H + + N+ L++ + + D GL + R G + APE
Sbjct: 127 YLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC 186
Query: 496 TDSRKATQASDVYSFGVVLLEILT 519
K ASDV+SFGV L E+LT
Sbjct: 187 LKECKFYYASDVWSFGVTLYELLT 210
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 108/279 (38%), Gaps = 35/279 (12%)
Query: 332 LGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSK 391
LG G FG+ V +K +K+ ++ + +F ++ +++ ++ HE +V+L +
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 71
Query: 392 DEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVHG 451
++ +Y + G + L R + + +H
Sbjct: 72 RPIFIITEYMANGCLLNYLREMRHRFQ-------TQQLLEMCKDVCEAMEYLESKQFLHR 124
Query: 452 NIKSSNIFLNSQQYGCVSDLGLT------TITSALAPVIARAAGYRAPEVTDSRKATQAS 505
++ + N +N Q VSD GL+ TS++ + PEV K + S
Sbjct: 125 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFP--VRWSPPEVLMYSKFSSKS 182
Query: 506 DVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRY-PNIE 563
D+++FGV++ EI + GK P E TAE L Y P++
Sbjct: 183 DIWAFGVLMWEIYSLGKMPYERFTNSE----------------TAEHIAQGLRLYRPHLA 226
Query: 564 EEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPNDS 602
E V I SC D+RP ++ I +V +S
Sbjct: 227 SEKV--YTIMYSCWHEKADERPTFKILLSNILDVMDEES 263
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 108/272 (39%), Gaps = 29/272 (10%)
Query: 332 LGKGTFGMAYKAILEDGT-TVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYS 390
LG G +G Y+ + + + TV VK LK+ + +F ++ ++ I+H N+V+L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 391 KDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVH 450
+ ++ ++ + G++ L R R + + +H
Sbjct: 86 EPPFYIITEFMTYGNLLDYL---RECNRQEV---SAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 451 GNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA----GYRAPEVTDSRKATQASD 506
++ + N + V+D GL+ + + A + APE K + SD
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 199
Query: 507 VYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEEE 565
V++FGV+L EI T G SP ++ L+ D + R E+
Sbjct: 200 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--------------KDYRMERPEGCPEK 245
Query: 566 MVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
+ E+++ +C P RP ++ + E +
Sbjct: 246 VYELMR---ACWQWNPSDRPSFAEIHQAFETM 274
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVI-ARAAG-----YRAPEVTDSRKA 501
VH ++ + N+ L +Q Y +SD GL+ A A+ G + APE + K
Sbjct: 490 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 549
Query: 502 TQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLV 536
+ SDV+SFGV++ E + G+ P G E+ ++
Sbjct: 550 SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML 585
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 84/204 (41%), Gaps = 26/204 (12%)
Query: 332 LGKGTFGMAYKAILE---DGT--TVVVKRLKDVNVG---KRDFEQQMEIVGSIRHENVVE 383
LG+G FG + DGT V VK LK+ G + +++++EI+ ++ HE++V+
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKE-GCGPQLRSGWQREIEILRTLYHEHIVK 74
Query: 384 LKAYYYSKDEK--LMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXX 441
K + EK +V +Y LGS+ L P
Sbjct: 75 YKGCCEDQGEKSVQLVMEYVPLGSLRDYL---------PRHCVGLAQLLLFAQQICEGMA 125
Query: 442 XXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLT-TITSALAPVIARAAG-----YRAPEV 495
+H + + N+ L++ + + D GL + R G + APE
Sbjct: 126 YLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC 185
Query: 496 TDSRKATQASDVYSFGVVLLEILT 519
K ASDV+SFGV L E+LT
Sbjct: 186 LKECKFYYASDVWSFGVTLYELLT 209
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 86/205 (41%), Gaps = 21/205 (10%)
Query: 329 AEVLGKGTFG---MAYKAILEDGTTVVVKRLKDVNVGKRDF----EQQMEIVGSIRHENV 381
+ LG+G+FG +AY G V +K + + K D E+++ + +RH ++
Sbjct: 9 VKTLGEGSFGKVKLAYHT--TTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHI 66
Query: 382 VELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXX 441
++L SKDE +MV +Y +E + + D +
Sbjct: 67 IKLYDVIKSKDEIIMVIEYAG---------NELFDYIVQRDKMSEQEARRFFQQIISAVE 117
Query: 442 XXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSA--LAPVIARAAGYRAPEVTDSR 499
K+VH ++K N+ L+ ++D GL+ I + + Y APEV +
Sbjct: 118 YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGK 177
Query: 500 -KATQASDVYSFGVVLLEILTGKSP 523
A DV+S GV+L +L + P
Sbjct: 178 LYAGPEVDVWSCGVILYVMLCRRLP 202
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 108/272 (39%), Gaps = 29/272 (10%)
Query: 332 LGKGTFGMAYKAILEDGT-TVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYS 390
LG G +G Y+ + + + TV VK LK+ + +F ++ ++ I+H N+V+L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 391 KDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVH 450
+ ++ ++ + G++ L R R ++ +H
Sbjct: 86 EPPFYIITEFMTYGNLLDYL---RECNRQEVN---AVVLLYMATQISSAMEYLEKKNFIH 139
Query: 451 GNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA----GYRAPEVTDSRKATQASD 506
++ + N + V+D GL+ + + A + APE K + SD
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 199
Query: 507 VYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEEE 565
V++FGV+L EI T G SP ++ L+ D + R E+
Sbjct: 200 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--------------KDYRMERPEGCPEK 245
Query: 566 MVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
+ E+++ +C P RP ++ + E +
Sbjct: 246 VYELMR---ACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 86/205 (41%), Gaps = 21/205 (10%)
Query: 329 AEVLGKGTFG---MAYKAILEDGTTVVVKRLKDVNVGKRDF----EQQMEIVGSIRHENV 381
+ LG+G+FG +AY G V +K + + K D E+++ + +RH ++
Sbjct: 13 VKTLGEGSFGKVKLAYHT--TTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHI 70
Query: 382 VELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXX 441
++L SKDE +MV +Y +E + + D +
Sbjct: 71 IKLYDVIKSKDEIIMVIEYAG---------NELFDYIVQRDKMSEQEARRFFQQIISAVE 121
Query: 442 XXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSA--LAPVIARAAGYRAPEVTDSR 499
K+VH ++K N+ L+ ++D GL+ I + + Y APEV +
Sbjct: 122 YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGK 181
Query: 500 -KATQASDVYSFGVVLLEILTGKSP 523
A DV+S GV+L +L + P
Sbjct: 182 LYAGPEVDVWSCGVILYVMLCRRLP 206
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVI-ARAAG-----YRAPEVTDSRKA 501
VH ++ + N+ L +Q Y +SD GL+ A A+ G + APE + K
Sbjct: 491 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 550
Query: 502 TQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLV 536
+ SDV+SFGV++ E + G+ P G E+ ++
Sbjct: 551 SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML 586
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 108/272 (39%), Gaps = 29/272 (10%)
Query: 332 LGKGTFGMAYKAILEDGT-TVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYS 390
LG G +G Y+ + + + TV VK LK+ + +F ++ ++ I+H N+V+L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 391 KDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVH 450
+ ++ ++ + G++ L R R ++ +H
Sbjct: 81 EPPFYIITEFMTYGNLLDYL---RECNRQEVN---AVVLLYMATQISSAMEYLEKKNFIH 134
Query: 451 GNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA----GYRAPEVTDSRKATQASD 506
++ + N + V+D GL+ + + A + APE K + SD
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 507 VYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEEE 565
V++FGV+L EI T G SP ++ L+ D + R E+
Sbjct: 195 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--------------KDYRMERPEGCPEK 240
Query: 566 MVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
+ E+++ +C P RP ++ + E +
Sbjct: 241 VYELMR---ACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 87/209 (41%), Gaps = 30/209 (14%)
Query: 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYY 388
E++G G FG +KA DG T V+KR+K N E++++ + + H N+V +
Sbjct: 17 ELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN---EKAEREVKALAKLDHVNIVHYNGCW 73
Query: 389 ---------------YSKDEKLMV-YDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXX 432
SK + L + ++ G++ + RGE LD
Sbjct: 74 DGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE---KLD---KVLALEL 127
Query: 433 XXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG--- 489
KL++ ++K SNIFL + + D GL T R+ G
Sbjct: 128 FEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR-XRSKGTLR 186
Query: 490 YRAPEVTDSRKATQASDVYSFGVVLLEIL 518
Y +PE S+ + D+Y+ G++L E+L
Sbjct: 187 YMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 118/280 (42%), Gaps = 37/280 (13%)
Query: 331 VLGKGTFGMAYKAILED-GTTVVVKRL---KDVNVGKRDFEQQMEIVGSIRHENVVELKA 386
++G+G++GM K +D G V +K+ D + K+ ++++++ +RHEN+V L
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXX 446
K +V+++ + + G LD+
Sbjct: 92 VCKKKKRWYLVFEFVDHTILDDLELFPNG-----LDYQV---VQKYLFQIINGIGFCHSH 143
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG---YRAPE-VTDSRKAT 502
++H +IK NI ++ + D G +A V YRAPE + K
Sbjct: 144 NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYG 203
Query: 503 QASDVYSFGVVLLEILTGKSPIH--TTGGDELVHLVRWVHSVVREEWT------------ 548
+A DV++ G ++ E+ G+ P+ + D+L H++ + +++
Sbjct: 204 KAVDVWAIGCLVTEMFMGE-PLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVR 262
Query: 549 -AEVFDVELL--RYPNIEEEMVEMLQIAMSCVVRMPDQRP 585
E+ + E L RYP + E ++++ A C+ PD+RP
Sbjct: 263 LPEIKEREPLERRYPKLSEVVIDL---AKKCLHIDPDKRP 299
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 108/272 (39%), Gaps = 29/272 (10%)
Query: 332 LGKGTFGMAYKAILEDGT-TVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYS 390
LG G +G Y+ + + + TV VK LK+ + +F ++ ++ I+H N+V+L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 391 KDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVH 450
+ ++ ++ + G++ L R R + + +H
Sbjct: 81 EPPFYIITEFMTYGNLLDYL---RECNRQEV---SAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 451 GNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA----GYRAPEVTDSRKATQASD 506
++ + N + V+D GL+ + + A + APE K + SD
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 507 VYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEEE 565
V++FGV+L EI T G SP ++ L+ D + R E+
Sbjct: 195 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--------------KDYRMERPEGCPEK 240
Query: 566 MVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
+ E+++ +C P RP ++ + E +
Sbjct: 241 VYELMR---ACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 64/157 (40%), Gaps = 22/157 (14%)
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-----YRAPEVTDSRKA 501
K +H ++ + NI L+ + + D GL + + + APE R
Sbjct: 211 KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY 270
Query: 502 TQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYP 560
T SDV+SFGV+L EI + G SP D EE+ + + +R P
Sbjct: 271 TIQSDVWSFGVLLWEIFSLGASPYPGVKID--------------EEFCRRLKEGTRMRAP 316
Query: 561 NIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
+ EM Q + C P QRP ++V + N+
Sbjct: 317 DYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNL 351
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 64/157 (40%), Gaps = 22/157 (14%)
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-----YRAPEVTDSRKA 501
K +H ++ + NI L+ + + D GL + + + APE R
Sbjct: 213 KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY 272
Query: 502 TQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYP 560
T SDV+SFGV+L EI + G SP D EE+ + + +R P
Sbjct: 273 TIQSDVWSFGVLLWEIFSLGASPYPGVKID--------------EEFCRRLKEGTRMRAP 318
Query: 561 NIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
+ EM Q + C P QRP ++V + N+
Sbjct: 319 DYTTP--EMYQTMLDCWHGEPSQRPTFSELVEHLGNL 353
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 86/205 (41%), Gaps = 21/205 (10%)
Query: 329 AEVLGKGTFG---MAYKAILEDGTTVVVKRLKDVNVGKRDF----EQQMEIVGSIRHENV 381
+ LG+G+FG +AY G V +K + + K D E+++ + +RH ++
Sbjct: 19 VKTLGEGSFGKVKLAYHT--TTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHI 76
Query: 382 VELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXX 441
++L SKDE +MV +Y +E + + D +
Sbjct: 77 IKLYDVIKSKDEIIMVIEYAG---------NELFDYIVQRDKMSEQEARRFFQQIISAVE 127
Query: 442 XXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSA--LAPVIARAAGYRAPEVTDSR 499
K+VH ++K N+ L+ ++D GL+ I + + Y APEV +
Sbjct: 128 YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGK 187
Query: 500 -KATQASDVYSFGVVLLEILTGKSP 523
A DV+S GV+L +L + P
Sbjct: 188 LYAGPEVDVWSCGVILYVMLCRRLP 212
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 86/205 (41%), Gaps = 21/205 (10%)
Query: 329 AEVLGKGTFG---MAYKAILEDGTTVVVKRLKDVNVGKRDF----EQQMEIVGSIRHENV 381
+ LG+G+FG +AY G V +K + + K D E+++ + +RH ++
Sbjct: 18 VKTLGEGSFGKVKLAYHT--TTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHI 75
Query: 382 VELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXX 441
++L SKDE +MV +Y +E + + D +
Sbjct: 76 IKLYDVIKSKDEIIMVIEYAG---------NELFDYIVQRDKMSEQEARRFFQQIISAVE 126
Query: 442 XXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSA--LAPVIARAAGYRAPEVTDSR 499
K+VH ++K N+ L+ ++D GL+ I + + Y APEV +
Sbjct: 127 YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGK 186
Query: 500 -KATQASDVYSFGVVLLEILTGKSP 523
A DV+S GV+L +L + P
Sbjct: 187 LYAGPEVDVWSCGVILYVMLCRRLP 211
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/273 (20%), Positives = 109/273 (39%), Gaps = 31/273 (11%)
Query: 332 LGKGTFGMAYKAILEDGT-TVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYS 390
LG G +G Y+ + + + TV VK LK+ + +F ++ ++ I+H N+V+L
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 391 KDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVH 450
+ ++ ++ + G++ L R R + + +H
Sbjct: 79 EPPFYIITEFMTYGNLLDYL---RECNRQEV---SAVVLLYMATQISSAMEYLEKKNFIH 132
Query: 451 GNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-----YRAPEVTDSRKATQAS 505
++ + N + V+D GL+ + + A A + APE K + S
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLMTG-DTFTAHAGAKFPIKWTAPESLAYNKFSIKS 191
Query: 506 DVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEE 564
DV++FGV+L EI T G SP ++ L+ D + R E
Sbjct: 192 DVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE--------------KDYRMERPEGCPE 237
Query: 565 EMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
++ E+++ +C P RP ++ + E +
Sbjct: 238 KVYELMR---ACWQWNPSDRPSFAEIHQAFETM 267
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 80/204 (39%), Gaps = 17/204 (8%)
Query: 330 EVLGKGTFGMAYKAILED-GTTVVVKRLKDVNVGKRDF---EQQMEIVGSIRHENVVELK 385
E LGKG F + + + + G K + + RDF E++ I ++H N+V L
Sbjct: 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 71
Query: 386 AYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXX 445
+ +V+D + G E E + ++ +
Sbjct: 72 DSIQEESFHYLVFDLVTGG--------ELFEDIVAREFYSEADASHCIQQILESIAYCHS 123
Query: 446 XKLVHGNIKSSNIFLNSQQYGC---VSDLGLTTIT--SALAPVIARAAGYRAPEVTDSRK 500
+VH N+K N+ L S+ G ++D GL S A GY +PEV
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDP 183
Query: 501 ATQASDVYSFGVVLLEILTGKSPI 524
++ D+++ GV+L +L G P
Sbjct: 184 YSKPVDIWACGVILYILLVGYPPF 207
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 80/204 (39%), Gaps = 17/204 (8%)
Query: 330 EVLGKGTFGMAYKAILED-GTTVVVKRLKDVNVGKRDF---EQQMEIVGSIRHENVVELK 385
E LGKG F + + + + G K + + RDF E++ I ++H N+V L
Sbjct: 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 71
Query: 386 AYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXX 445
+ +V+D + G E E + ++ +
Sbjct: 72 DSIQEESFHYLVFDLVTGG--------ELFEDIVAREFYSEADASHCIQQILESIAYCHS 123
Query: 446 XKLVHGNIKSSNIFLNSQQYGC---VSDLGLTTIT--SALAPVIARAAGYRAPEVTDSRK 500
+VH N+K N+ L S+ G ++D GL S A GY +PEV
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDP 183
Query: 501 ATQASDVYSFGVVLLEILTGKSPI 524
++ D+++ GV+L +L G P
Sbjct: 184 YSKPVDIWACGVILYILLVGYPPF 207
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 88/220 (40%), Gaps = 25/220 (11%)
Query: 330 EVLGKGTFGMAYKAIL----EDGTTVVVKRLK-DVNVGKRDFEQQM---EIVGSIRHENV 381
++LGKGTFG K IL G +K LK +V V K + + ++ + RH +
Sbjct: 157 KLLGKGTFG---KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 213
Query: 382 VELKAYYYSKDEKLMVYDYYSLGSVSAMLHSER--GEGRIPLDWDTXXXXXXXXXXXXXX 439
LK + + D V +Y + G + L ER E R
Sbjct: 214 TALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF---------YGAEIVSAL 264
Query: 440 XXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTT---ITSALAPVIARAAGYRAPEVT 496
+V+ ++K N+ L+ + ++D GL A Y APEV
Sbjct: 265 DYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVL 324
Query: 497 DSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLV 536
+ +A D + GVV+ E++ G+ P + ++L L+
Sbjct: 325 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI 364
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 108/272 (39%), Gaps = 29/272 (10%)
Query: 332 LGKGTFGMAYKAILEDGT-TVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYS 390
LG G +G Y+ + + + TV VK LK+ + +F ++ ++ I+H N+V+L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 391 KDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVH 450
+ ++ ++ + G++ L R R + + +H
Sbjct: 81 EPPFYIIIEFMTYGNLLDYL---RECNRQEV---SAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 451 GNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA----GYRAPEVTDSRKATQASD 506
++ + N + V+D GL+ + + A + APE K + SD
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 507 VYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEEE 565
V++FGV+L EI T G SP ++ L+ D + R E+
Sbjct: 195 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--------------KDYRMERPEGCPEK 240
Query: 566 MVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
+ E+++ +C P RP ++ + E +
Sbjct: 241 VYELMR---ACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 64/157 (40%), Gaps = 22/157 (14%)
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-----YRAPEVTDSRKA 501
K +H ++ + NI L+ + + D GL + + + APE R
Sbjct: 220 KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY 279
Query: 502 TQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYP 560
T SDV+SFGV+L EI + G SP D EE+ + + +R P
Sbjct: 280 TIQSDVWSFGVLLWEIFSLGASPYPGVKID--------------EEFCRRLKEGTRMRAP 325
Query: 561 NIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
+ EM Q + C P QRP ++V + N+
Sbjct: 326 DY--TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 360
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 88/220 (40%), Gaps = 25/220 (11%)
Query: 330 EVLGKGTFGMAYKAIL----EDGTTVVVKRLK-DVNVGKRDFEQQM---EIVGSIRHENV 381
++LGKGTFG K IL G +K LK +V V K + + ++ + RH +
Sbjct: 154 KLLGKGTFG---KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 210
Query: 382 VELKAYYYSKDEKLMVYDYYSLGSVSAMLHSER--GEGRIPLDWDTXXXXXXXXXXXXXX 439
LK + + D V +Y + G + L ER E R
Sbjct: 211 TALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF---------YGAEIVSAL 261
Query: 440 XXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTT---ITSALAPVIARAAGYRAPEVT 496
+V+ ++K N+ L+ + ++D GL A Y APEV
Sbjct: 262 DYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVL 321
Query: 497 DSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLV 536
+ +A D + GVV+ E++ G+ P + ++L L+
Sbjct: 322 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI 361
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 80/204 (39%), Gaps = 17/204 (8%)
Query: 330 EVLGKGTFGMAYKAILED-GTTVVVKRLKDVNVGKRDF---EQQMEIVGSIRHENVVELK 385
E LGKG F + + + + G K + + RDF E++ I ++H N+V L
Sbjct: 11 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 70
Query: 386 AYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXX 445
+ +V+D + G E E + ++ +
Sbjct: 71 DSIQEESFHYLVFDLVTGG--------ELFEDIVAREFYSEADASHCIQQILESIAYCHS 122
Query: 446 XKLVHGNIKSSNIFLNSQQYGC---VSDLGLTTIT--SALAPVIARAAGYRAPEVTDSRK 500
+VH N+K N+ L S+ G ++D GL S A GY +PEV
Sbjct: 123 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDP 182
Query: 501 ATQASDVYSFGVVLLEILTGKSPI 524
++ D+++ GV+L +L G P
Sbjct: 183 YSKPVDIWACGVILYILLVGYPPF 206
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 64/157 (40%), Gaps = 22/157 (14%)
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-----YRAPEVTDSRKA 501
K +H ++ + NI L+ + + D GL + + + APE R
Sbjct: 218 KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY 277
Query: 502 TQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYP 560
T SDV+SFGV+L EI + G SP D EE+ + + +R P
Sbjct: 278 TIQSDVWSFGVLLWEIFSLGASPYPGVKID--------------EEFCRRLKEGTRMRAP 323
Query: 561 NIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
+ EM Q + C P QRP ++V + N+
Sbjct: 324 DY--TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 358
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 108/272 (39%), Gaps = 29/272 (10%)
Query: 332 LGKGTFGMAYKAILEDGT-TVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYS 390
LG G +G Y+ + + + TV VK LK+ + +F ++ ++ I+H N+V+L
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 391 KDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVH 450
+ ++ ++ + G++ L R R ++ +H
Sbjct: 83 EPPFYIITEFMTYGNLLDYL---RECNRQEVN---AVVLLYMATQISSAMEYLEKKNFIH 136
Query: 451 GNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA----GYRAPEVTDSRKATQASD 506
++ + N + V+D GL+ + + A + APE K + SD
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 196
Query: 507 VYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEEE 565
V++FGV+L EI T G SP ++ L+ D + R E+
Sbjct: 197 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--------------KDYRMERPEGCPEK 242
Query: 566 MVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
+ E+++ +C P RP ++ + E +
Sbjct: 243 VYELMR---ACWQWNPSDRPSFAEIHQAFETM 271
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 108/272 (39%), Gaps = 29/272 (10%)
Query: 332 LGKGTFGMAYKAILEDGT-TVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYS 390
LG G +G Y+ + + + TV VK LK+ + +F ++ ++ I+H N+V+L
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 391 KDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVH 450
+ ++ ++ + G++ L R R ++ +H
Sbjct: 83 EPPFYIITEFMTYGNLLDYL---RECNRQEVN---AVVLLYMATQISSAMEYLEKKNFIH 136
Query: 451 GNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA----GYRAPEVTDSRKATQASD 506
++ + N + V+D GL+ + + A + APE K + SD
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 196
Query: 507 VYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEEE 565
V++FGV+L EI T G SP ++ L+ D + R E+
Sbjct: 197 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--------------KDYRMERPEGCPEK 242
Query: 566 MVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
+ E+++ +C P RP ++ + E +
Sbjct: 243 VYELMR---ACWQWNPSDRPSFAEIHQAFETM 271
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 83/217 (38%), Gaps = 18/217 (8%)
Query: 316 NYAFDLEDLLRASAEVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNVG--KRDFEQQMEI 372
+ + EDL+ E +G+G FG + L D T V VK ++ K F Q+ I
Sbjct: 108 KWVLNHEDLV--LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARI 165
Query: 373 VGSIRHENVVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXX 432
+ H N+V L K +V + G L +E R+
Sbjct: 166 LKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRV-------KTLLQM 218
Query: 433 XXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTT-----ITSALAPVIARA 487
+H ++ + N + + +SD G++ + +A +
Sbjct: 219 VGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVP 278
Query: 488 AGYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSP 523
+ APE + + + SDV+SFG++L E + G SP
Sbjct: 279 VKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASP 315
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 88/210 (41%), Gaps = 29/210 (13%)
Query: 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSI--RHENVVELKAY 387
E +GKG FG ++ G V VK +R + ++ EI ++ RHEN++ A
Sbjct: 48 ESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE--ERSWFREAEIYQTVMLRHENILGFIAA 104
Query: 388 YYSKD-----EKLMVYDYYSLGSVSAML--HSERGEGRIPLDWDTXXXXXXXXXXXXXXX 440
+KD + +V DY+ GS+ L ++ EG I L T
Sbjct: 105 D-NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 163
Query: 441 XXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYR-------AP 493
+ H ++KS NI + C++DLGL + I A +R AP
Sbjct: 164 GKPA---IAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP 220
Query: 494 EVTDSR------KATQASDVYSFGVVLLEI 517
EV D ++ + +D+Y+ G+V EI
Sbjct: 221 EVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 80/204 (39%), Gaps = 17/204 (8%)
Query: 330 EVLGKGTFGMAYKAILED-GTTVVVKRLKDVNVGKRDF---EQQMEIVGSIRHENVVELK 385
E LGKG F + + + + G K + + RDF E++ I ++H N+V L
Sbjct: 35 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 94
Query: 386 AYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXX 445
+ +V+D + G E E + ++ +
Sbjct: 95 DSIQEESFHYLVFDLVTGG--------ELFEDIVAREFYSEADASHCIQQILESIAYCHS 146
Query: 446 XKLVHGNIKSSNIFLNSQQYGC---VSDLGLTTIT--SALAPVIARAAGYRAPEVTDSRK 500
+VH N+K N+ L S+ G ++D GL S A GY +PEV
Sbjct: 147 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDP 206
Query: 501 ATQASDVYSFGVVLLEILTGKSPI 524
++ D+++ GV+L +L G P
Sbjct: 207 YSKPVDIWACGVILYILLVGYPPF 230
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 86/213 (40%), Gaps = 14/213 (6%)
Query: 316 NYAFDLEDLLRASAEVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGS 375
N D E+L E +GKG+FG +K I VV ++ D+ + + E + +
Sbjct: 15 NLKADPEELF-TKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITV 73
Query: 376 IRHENVVELKAYY--YSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXX 433
+ + + YY Y KD KL + Y LG SA+ E G PLD
Sbjct: 74 LSQCDSPYVTKYYGSYLKDTKLWIIMEY-LGGGSALDLLEPG----PLD---ETQIATIL 125
Query: 434 XXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLT---TITSALAPVIARAAGY 490
K +H +IK++N+ L+ ++D G+ T T +
Sbjct: 126 REILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFW 185
Query: 491 RAPEVTDSRKATQASDVYSFGVVLLEILTGKSP 523
APEV +D++S G+ +E+ G+ P
Sbjct: 186 MAPEVIKQSAYDSKADIWSLGITAIELARGEPP 218
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 86/211 (40%), Gaps = 14/211 (6%)
Query: 318 AFDLEDLLRASAEVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIR 377
+ D E+L E +GKG+FG +K I VV ++ D+ + + E + + +
Sbjct: 2 SLDPEELF-TKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLS 60
Query: 378 HENVVELKAYY--YSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXX 435
+ + YY Y KD KL + Y LG SA+ E G PLD
Sbjct: 61 QCDSPYVTKYYGSYLKDTKLWIIMEY-LGGGSALDLLEPG----PLD---ETQIATILRE 112
Query: 436 XXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLT---TITSALAPVIARAAGYRA 492
K +H +IK++N+ L+ ++D G+ T T + A
Sbjct: 113 ILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMA 172
Query: 493 PEVTDSRKATQASDVYSFGVVLLEILTGKSP 523
PEV +D++S G+ +E+ G+ P
Sbjct: 173 PEVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 108/272 (39%), Gaps = 29/272 (10%)
Query: 332 LGKGTFGMAYKAILEDGT-TVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYS 390
LG G +G Y+ + + + TV VK LK+ + +F ++ ++ I+H N+V+L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 391 KDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVH 450
+ ++ ++ + G++ L R R + + +H
Sbjct: 81 EPPFYIITEFMTYGNLLDYL---RECNRQEV---SAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 451 GNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA----GYRAPEVTDSRKATQASD 506
++ + N + V+D GL+ + + A + APE K + SD
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 507 VYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEEE 565
V++FGV+L EI T G SP ++ L+ D + R E+
Sbjct: 195 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--------------KDYRMERPEGCPEK 240
Query: 566 MVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
+ E+++ +C P RP ++ + E +
Sbjct: 241 VYELMR---ACWQWNPSDRPSFAEIHQAFETM 269
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 89/220 (40%), Gaps = 25/220 (11%)
Query: 330 EVLGKGTFGMAYKAIL----EDGTTVVVKRLK-DVNVGKRDFEQQM---EIVGSIRHENV 381
++LGKGTFG K IL G +K LK +V V K + + ++ + RH +
Sbjct: 14 KLLGKGTFG---KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 70
Query: 382 VELKAYYYSKDEKLMVYDYYSLGSVSAMLHSER--GEGRIPLDWDTXXXXXXXXXXXXXX 439
LK + + D V +Y + G + L ER E R
Sbjct: 71 TALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF---------YGAEIVSAL 121
Query: 440 XXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG---YRAPEVT 496
+V+ ++K N+ L+ + ++D GL + G Y APEV
Sbjct: 122 DYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVL 181
Query: 497 DSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLV 536
+ +A D + GVV+ E++ G+ P + ++L L+
Sbjct: 182 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI 221
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 82/196 (41%), Gaps = 11/196 (5%)
Query: 332 LGKGTFGMAYKAILEDGTTVVVKRLKDVNVG---KRDFEQQMEIVGSIRHENVVELKAYY 388
LG G G+ +K + V+ ++L + + + ++++++ +V +
Sbjct: 17 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 76
Query: 389 YSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKL 448
YS E + ++ GS+ +L + GRIP K+
Sbjct: 77 YSDGEISICMEHMDGGSLDQVL---KKAGRIP----EQILGKVSIAVIKGLTYLREKHKI 129
Query: 449 VHGNIKSSNIFLNSQQYGCVSDLGLT-TITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
+H ++K SNI +NS+ + D G++ + +A Y +PE + SD+
Sbjct: 130 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTRSYMSPERLQGTHYSVQSDI 189
Query: 508 YSFGVVLLEILTGKSP 523
+S G+ L+E+ G+ P
Sbjct: 190 WSMGLSLVEMAVGRYP 205
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 89/220 (40%), Gaps = 25/220 (11%)
Query: 330 EVLGKGTFGMAYKAIL----EDGTTVVVKRLK-DVNVGKRDFEQQM---EIVGSIRHENV 381
++LGKGTFG K IL G +K LK +V V K + + ++ + RH +
Sbjct: 15 KLLGKGTFG---KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 71
Query: 382 VELKAYYYSKDEKLMVYDYYSLGSVSAMLHSER--GEGRIPLDWDTXXXXXXXXXXXXXX 439
LK + + D V +Y + G + L ER E R
Sbjct: 72 TALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF---------YGAEIVSAL 122
Query: 440 XXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG---YRAPEVT 496
+V+ ++K N+ L+ + ++D GL + G Y APEV
Sbjct: 123 DYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVL 182
Query: 497 DSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLV 536
+ +A D + GVV+ E++ G+ P + ++L L+
Sbjct: 183 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI 222
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 91/234 (38%), Gaps = 26/234 (11%)
Query: 291 RGMSPEKVVSRNQDASNRLFFFEGCNYAFDLEDLLRASAEVLGKGTFGMAYKA-ILEDGT 349
RG + E + S D S FF+ + R S LG G++G +K EDG
Sbjct: 34 RGEASETLQSPGYDPSRPESFFQ--------QSFQRLSR--LGHGSYGEVFKVRSKEDGR 83
Query: 350 TVVVKRLKDVNVGKRDFEQQMEIVGSI----RHENVVELKAYYYSKDEKLMVYDYYSLGS 405
VKR G +D +++ VGS +H V L+ + +E ++Y L
Sbjct: 84 LYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAW---EEGGILYLQTELCG 140
Query: 406 VSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQY 465
S H E +P LVH ++K +NIFL +
Sbjct: 141 PSLQQHCEAWGASLP-----EAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGR 195
Query: 466 GCVSDLGLTTI--TSALAPVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEI 517
+ D GL T+ V Y APE+ T A+DV+S G+ +LE+
Sbjct: 196 CKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQGSYGT-AADVFSLGLTILEV 248
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 89/220 (40%), Gaps = 25/220 (11%)
Query: 330 EVLGKGTFGMAYKAIL----EDGTTVVVKRLK-DVNVGKRDFEQQM---EIVGSIRHENV 381
++LGKGTFG K IL G +K LK +V V K + + ++ + RH +
Sbjct: 16 KLLGKGTFG---KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 72
Query: 382 VELKAYYYSKDEKLMVYDYYSLGSVSAMLHSER--GEGRIPLDWDTXXXXXXXXXXXXXX 439
LK + + D V +Y + G + L ER E R
Sbjct: 73 TALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF---------YGAEIVSAL 123
Query: 440 XXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG---YRAPEVT 496
+V+ ++K N+ L+ + ++D GL + G Y APEV
Sbjct: 124 DYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVL 183
Query: 497 DSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLV 536
+ +A D + GVV+ E++ G+ P + ++L L+
Sbjct: 184 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI 223
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 86/211 (40%), Gaps = 14/211 (6%)
Query: 318 AFDLEDLLRASAEVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIR 377
+ D E+L E +GKG+FG +K I VV ++ D+ + + E + + +
Sbjct: 2 SLDPEELF-TKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLS 60
Query: 378 HENVVELKAYY--YSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXX 435
+ + YY Y KD KL + Y LG SA+ E G PLD
Sbjct: 61 QCDSPYVTKYYGSYLKDTKLWIIMEY-LGGGSALDLLEPG----PLD---ETQIATILRE 112
Query: 436 XXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLT---TITSALAPVIARAAGYRA 492
K +H +IK++N+ L+ ++D G+ T T + A
Sbjct: 113 ILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMA 172
Query: 493 PEVTDSRKATQASDVYSFGVVLLEILTGKSP 523
PEV +D++S G+ +E+ G+ P
Sbjct: 173 PEVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 101/262 (38%), Gaps = 35/262 (13%)
Query: 332 LGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYSK 391
LG G FG+ V +K +K+ ++ + +F ++ +++ ++ HE +V+L +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 76
Query: 392 DEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVHG 451
++ +Y + G + L R + + +H
Sbjct: 77 RPIFIITEYMANGCLLNYLREMRHRFQ-------TQQLLEMCKDVCEAMEYLESKQFLHR 129
Query: 452 NIKSSNIFLNSQQYGCVSDLGLT------TITSALAPVIARAAGYRAPEVTDSRKATQAS 505
++ + N +N Q VSD GL+ TS++ + PEV K + S
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFP--VRWSPPEVLMYSKFSSKS 187
Query: 506 DVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRY-PNIE 563
D+++FGV++ EI + GK P E TAE L Y P++
Sbjct: 188 DIWAFGVLMWEIYSLGKMPYERFTNSE----------------TAEHIAQGLRLYRPHLA 231
Query: 564 EEMVEMLQIAMSCVVRMPDQRP 585
E V I SC D+RP
Sbjct: 232 SEKV--YTIMYSCWHEKADERP 251
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 88/210 (41%), Gaps = 29/210 (13%)
Query: 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSI--RHENVVELKAY 387
E +GKG FG ++ G V VK +R + ++ EI ++ RHEN++ A
Sbjct: 9 ESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE--ERSWFREAEIYQTVMLRHENILGFIAA 65
Query: 388 YYSKD-----EKLMVYDYYSLGSVSAML--HSERGEGRIPLDWDTXXXXXXXXXXXXXXX 440
+KD + +V DY+ GS+ L ++ EG I L T
Sbjct: 66 D-NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 124
Query: 441 XXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYR-------AP 493
+ H ++KS NI + C++DLGL + I A +R AP
Sbjct: 125 GKPA---IAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP 181
Query: 494 EVTDSR------KATQASDVYSFGVVLLEI 517
EV D ++ + +D+Y+ G+V EI
Sbjct: 182 EVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 88/210 (41%), Gaps = 29/210 (13%)
Query: 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSI--RHENVVELKAY 387
E +GKG FG ++ G V VK +R + ++ EI ++ RHEN++ A
Sbjct: 35 ESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE--ERSWFREAEIYQTVMLRHENILGFIAA 91
Query: 388 YYSKD-----EKLMVYDYYSLGSVSAML--HSERGEGRIPLDWDTXXXXXXXXXXXXXXX 440
+KD + +V DY+ GS+ L ++ EG I L T
Sbjct: 92 D-NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 150
Query: 441 XXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYR-------AP 493
+ H ++KS NI + C++DLGL + I A +R AP
Sbjct: 151 GKPA---IAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP 207
Query: 494 EVTDSR------KATQASDVYSFGVVLLEI 517
EV D ++ + +D+Y+ G+V EI
Sbjct: 208 EVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 88/210 (41%), Gaps = 29/210 (13%)
Query: 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSI--RHENVVELKAY 387
E +GKG FG ++ G V VK +R + ++ EI ++ RHEN++ A
Sbjct: 10 ESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE--ERSWFREAEIYQTVMLRHENILGFIAA 66
Query: 388 YYSKD-----EKLMVYDYYSLGSVSAML--HSERGEGRIPLDWDTXXXXXXXXXXXXXXX 440
+KD + +V DY+ GS+ L ++ EG I L T
Sbjct: 67 D-NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 125
Query: 441 XXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYR-------AP 493
+ H ++KS NI + C++DLGL + I A +R AP
Sbjct: 126 GKPA---IAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP 182
Query: 494 EVTDSR------KATQASDVYSFGVVLLEI 517
EV D ++ + +D+Y+ G+V EI
Sbjct: 183 EVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 87/230 (37%), Gaps = 29/230 (12%)
Query: 331 VLGKGTFGMAYKA-ILEDGTTVVVKRLK-DVNVGKRDFEQQM---EIVGSIR-HENVVEL 384
VLGKG+FG A + E G VK LK DV + D E M I+ R H + +L
Sbjct: 30 VLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQL 89
Query: 385 KAYYYSKDEKLMVYDYYSLGSVSAMLHSER--GEGRIPLDWDTXXXXXXXXXXXXXXXXX 442
+ + D V ++ + G + + R E R
Sbjct: 90 FCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEAR----------ARFYAAEIISALMF 139
Query: 443 XXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG---YRAPEVTDSR 499
+++ ++K N+ L+ + + ++D G+ A G Y APE+
Sbjct: 140 LHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEM 199
Query: 500 KATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLV--------RWVHS 541
A D ++ GV+L E+L G +P D+L + W+H
Sbjct: 200 LYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLHE 249
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 88/210 (41%), Gaps = 29/210 (13%)
Query: 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSI--RHENVVELKAY 387
E +GKG FG ++ G V VK +R + ++ EI ++ RHEN++ A
Sbjct: 12 ESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE--ERSWFREAEIYQTVMLRHENILGFIAA 68
Query: 388 YYSKD-----EKLMVYDYYSLGSVSAML--HSERGEGRIPLDWDTXXXXXXXXXXXXXXX 440
+KD + +V DY+ GS+ L ++ EG I L T
Sbjct: 69 D-NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 127
Query: 441 XXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYR-------AP 493
+ H ++KS NI + C++DLGL + I A +R AP
Sbjct: 128 GKPA---IAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP 184
Query: 494 EVTDSR------KATQASDVYSFGVVLLEI 517
EV D ++ + +D+Y+ G+V EI
Sbjct: 185 EVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 88/210 (41%), Gaps = 29/210 (13%)
Query: 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSI--RHENVVELKAY 387
E +GKG FG ++ G V VK +R + ++ EI ++ RHEN++ A
Sbjct: 15 ESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE--ERSWFREAEIYQTVMLRHENILGFIAA 71
Query: 388 YYSKD-----EKLMVYDYYSLGSVSAML--HSERGEGRIPLDWDTXXXXXXXXXXXXXXX 440
+KD + +V DY+ GS+ L ++ EG I L T
Sbjct: 72 D-NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 130
Query: 441 XXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYR-------AP 493
+ H ++KS NI + C++DLGL + I A +R AP
Sbjct: 131 GKPA---IAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP 187
Query: 494 EVTDSR------KATQASDVYSFGVVLLEI 517
EV D ++ + +D+Y+ G+V EI
Sbjct: 188 EVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 86/211 (40%), Gaps = 14/211 (6%)
Query: 318 AFDLEDLLRASAEVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIR 377
+ D E+L E +GKG+FG +K I VV ++ D+ + + E + + +
Sbjct: 22 SMDPEELF-TKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLS 80
Query: 378 HENVVELKAYY--YSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXX 435
+ + YY Y KD KL + Y LG SA+ E G PLD
Sbjct: 81 QCDSPYVTKYYGSYLKDTKLWIIMEY-LGGGSALDLLEPG----PLD---ETQIATILRE 132
Query: 436 XXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLT---TITSALAPVIARAAGYRA 492
K +H +IK++N+ L+ ++D G+ T T + A
Sbjct: 133 ILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMA 192
Query: 493 PEVTDSRKATQASDVYSFGVVLLEILTGKSP 523
PEV +D++S G+ +E+ G+ P
Sbjct: 193 PEVIKQSAYDSKADIWSLGITAIELARGEPP 223
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 83/219 (37%), Gaps = 22/219 (10%)
Query: 316 NYAFDLEDLLRASAEVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNVG--KRDFEQQMEI 372
+ + EDL+ E +G+G FG + L D T V VK ++ K F Q+ I
Sbjct: 108 KWVLNHEDLV--LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARI 165
Query: 373 VGSIRHENVVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXX 432
+ H N+V L K +V + G L +E R+
Sbjct: 166 LKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRV-------KTLLQM 218
Query: 433 XXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYR- 491
+H ++ + N + + +SD G++ V A + G R
Sbjct: 219 VGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSR--EEADGVYAASGGLRQ 276
Query: 492 ------APEVTDSRKATQASDVYSFGVVLLEILT-GKSP 523
APE + + + SDV+SFG++L E + G SP
Sbjct: 277 VPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASP 315
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 102/239 (42%), Gaps = 42/239 (17%)
Query: 330 EVLGKGTFGMAYKAILEDGTTVVVKRLK----DVNVGKRDFEQQMEIVGSIRHENVVELK 385
E +G+GT+G+ YKA G T +K+++ D + +++ I+ ++H N+V+L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTI-REISILKELKHSNIVKLY 66
Query: 386 AYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXX 445
++K ++V+++ + E G +
Sbjct: 67 DVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESV--------TAKSFLLQLLNGIAYCHD 118
Query: 446 XKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG--------------YR 491
+++H ++K N+ +N + ++D GL ARA G YR
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGL-----------ARAFGIPVRKYTHEIVTLWYR 167
Query: 492 APEV-TDSRKATQASDVYSFGVVLLEILTGKSPIH--TTGGDELVHLVRWVHSVVREEW 547
AP+V S+K + D++S G + E++ G +P+ + D+L+ + R + + + W
Sbjct: 168 APDVLMGSKKYSTTIDIWSVGCIFAEMVNG-TPLFPGVSEADQLMRIFRILGTPNSKNW 225
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 102/239 (42%), Gaps = 42/239 (17%)
Query: 330 EVLGKGTFGMAYKAILEDGTTVVVKRLK----DVNVGKRDFEQQMEIVGSIRHENVVELK 385
E +G+GT+G+ YKA G T +K+++ D + +++ I+ ++H N+V+L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTI-REISILKELKHSNIVKLY 66
Query: 386 AYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXX 445
++K ++V+++ + E G +
Sbjct: 67 DVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESV--------TAKSFLLQLLNGIAYCHD 118
Query: 446 XKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG--------------YR 491
+++H ++K N+ +N + ++D GL ARA G YR
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGL-----------ARAFGIPVRKYTHEVVTLWYR 167
Query: 492 APEV-TDSRKATQASDVYSFGVVLLEILTGKSPIH--TTGGDELVHLVRWVHSVVREEW 547
AP+V S+K + D++S G + E++ G +P+ + D+L+ + R + + + W
Sbjct: 168 APDVLMGSKKYSTTIDIWSVGCIFAEMVNG-TPLFPGVSEADQLMRIFRILGTPNSKNW 225
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 102/239 (42%), Gaps = 42/239 (17%)
Query: 330 EVLGKGTFGMAYKAILEDGTTVVVKRLK----DVNVGKRDFEQQMEIVGSIRHENVVELK 385
E +G+GT+G+ YKA G T +K+++ D + +++ I+ ++H N+V+L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTI-REISILKELKHSNIVKLY 66
Query: 386 AYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXX 445
++K ++V+++ + E G +
Sbjct: 67 DVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESV--------TAKSFLLQLLNGIAYCHD 118
Query: 446 XKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG--------------YR 491
+++H ++K N+ +N + ++D GL ARA G YR
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGL-----------ARAFGIPVRKYTHEVVTLWYR 167
Query: 492 APEV-TDSRKATQASDVYSFGVVLLEILTGKSPIH--TTGGDELVHLVRWVHSVVREEW 547
AP+V S+K + D++S G + E++ G +P+ + D+L+ + R + + + W
Sbjct: 168 APDVLMGSKKYSTTIDIWSVGCIFAEMVNG-APLFPGVSEADQLMRIFRILGTPNSKNW 225
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 114/282 (40%), Gaps = 46/282 (16%)
Query: 330 EVLGKGTFGMAYKAILED--------GTTVVVKRLKDVNVGKRD-FEQQMEIVGSIRHEN 380
E LG+GTF +K + + T V++K L + + F + ++ + H++
Sbjct: 14 ESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKH 73
Query: 381 VVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXX 440
+V + DE ++V ++ GS+ L ++ + I + W
Sbjct: 74 LVLNYGVCFCGDENILVQEFVKFGSLDTYL--KKNKNCINILWKLEVAKQLAWAMHFLEE 131
Query: 441 XXXXXXKLVHGNIKSSNIFLNSQQ--------YGCVSDLGLTTITSALAPVIARAAGYRA 492
L+HGN+ + NI L ++ + +SD G++ IT ++ +
Sbjct: 132 NT-----LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS-ITVLPKDILQERIPWVP 185
Query: 493 PEVTDSRKATQ-ASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEV 551
PE ++ K A+D +SFG L EI +GGD+ + S + + +
Sbjct: 186 PECIENPKNLNLATDKWSFGTTLWEI--------CSGGDKPL-------SALDSQRKLQF 230
Query: 552 F-DVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592
+ D L P + E+ + +C+ PD RP ++R
Sbjct: 231 YEDRHQLPAP----KAAELANLINNCMDYEPDHRPSFRAIIR 268
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 77/174 (44%), Gaps = 37/174 (21%)
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIA--RAAG---YRAPEVTDSRKA 501
K++H +IK SNI L+ + D G I+ L IA R AG Y APE D +
Sbjct: 146 KIIHRDIKPSNILLDRSGNIKLCDFG---ISGQLVDSIAKTRDAGCRPYMAPERIDPSAS 202
Query: 502 TQA----SDVYSFGVVLLEILTGKSPIHTTGG--DELVHLVR------------------ 537
Q SDV+S G+ L E+ TG+ P D+L +V+
Sbjct: 203 RQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSF 262
Query: 538 --WVHSVVREEWTAEVFDVELLRYPNIEEEMVEMLQIAMSC-VVRMPDQRPKMP 588
+V+ + ++ + ELL++P I M E + ++C V ++ DQ P P
Sbjct: 263 INFVNLCLTKDESKRPKYKELLKHPFI--LMYEERAVEVACYVCKILDQMPATP 314
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTT---ITSALAPVIARAAGYRAPEVTDSRKATQ 503
+++H ++K N+FLN + D GL T V+ Y APEV + +
Sbjct: 135 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSF 194
Query: 504 ASDVYSFGVVLLEILTGKSPIHTT 527
DV+S G ++ +L GK P T+
Sbjct: 195 EVDVWSIGCIMYTLLVGKPPFETS 218
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTT---ITSALAPVIARAAGYRAPEVTDSRKATQ 503
+++H ++K N+FLN + D GL T V+ Y APEV + +
Sbjct: 159 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSF 218
Query: 504 ASDVYSFGVVLLEILTGKSPIHTT 527
DV+S G ++ +L GK P T+
Sbjct: 219 EVDVWSIGCIMYTLLVGKPPFETS 242
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTT---ITSALAPVIARAAGYRAPEVTDSRKATQ 503
+++H ++K N+FLN + D GL T V+ Y APEV + +
Sbjct: 161 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSF 220
Query: 504 ASDVYSFGVVLLEILTGKSPIHTT 527
DV+S G ++ +L GK P T+
Sbjct: 221 EVDVWSIGCIMYTLLVGKPPFETS 244
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 86/222 (38%), Gaps = 43/222 (19%)
Query: 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYY 388
E++G G FG +KA DG T V++R+K N E++++ + + H N+V +
Sbjct: 18 ELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNN---EKAEREVKALAKLDHVNIVHYNGCW 74
Query: 389 -------YSKDEKLMVYDY----------------------YSLGSVSAMLHSERGEGRI 419
+ D+ L DY G++ + RGE
Sbjct: 75 DGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE--- 131
Query: 420 PLDWDTXXXXXXXXXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSA 479
LD KL+H ++K SNIFL + + D GL T
Sbjct: 132 KLD---KVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKN 188
Query: 480 LAPVIARAAG---YRAPEVTDSRKATQASDVYSFGVVLLEIL 518
R+ G Y +PE S+ + D+Y+ G++L E+L
Sbjct: 189 DGKR-TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 117/299 (39%), Gaps = 42/299 (14%)
Query: 332 LGKGTFGMAYKAILE---DGT--TVVVKRLK-DVNVGKRD-FEQQMEIVGSIRHENVVEL 384
LG+G FG + DGT V VK LK D R ++Q+++I+ ++ HE++++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 385 KAYYYSKDEK--LMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXX 442
K +V +Y LGS+ L P
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYL---------PRHSIGLAQLLLFAQQICEGMAY 149
Query: 443 XXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLT-TITSALAPVIARAAG-----YRAPEVT 496
+H ++ + N+ L++ + + D GL + R G + APE
Sbjct: 150 LHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECL 209
Query: 497 DSRKATQASDVYSFGVVLLEILT----GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVF 552
K ASDV+SFGV L E+LT +SP T EL+ + + +V+R
Sbjct: 210 KEYKFYYASDVWSFGVTLYELLTHCDSSQSP--PTKFLELIGIAQGQMTVLRL------- 260
Query: 553 DVELL----RYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPNDSENRPS 607
ELL R P ++ E+ + +C RP +++ +++ V PS
Sbjct: 261 -TELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQAPS 318
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 85/213 (39%), Gaps = 31/213 (14%)
Query: 330 EVLGKGTFGMAYKAIL--EDGTTV--VVKRLKDV-NVGK-RDFEQQMEIVGSIRHENVVE 383
EV+G+G FG Y L DG + VK L + ++G+ F + I+ H NV+
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 384 LKAY-YYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXX 442
L S+ L+V Y G + + R E P T
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP----TVKDLIGFGLQVAKGMKY 147
Query: 443 XXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLT------------TITSALAPVIARAAGY 490
K VH ++ + N L+ + V+D GL T A PV +
Sbjct: 148 LASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPV-----KW 202
Query: 491 RAPEVTDSRKATQASDVYSFGVVLLEILTGKSP 523
A E ++K T SDV+SFGV+L E++T +P
Sbjct: 203 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/205 (20%), Positives = 84/205 (40%), Gaps = 11/205 (5%)
Query: 332 LGKGTFGMAYKAILEDGTTVVVKRLKDVNVG---KRDFEQQMEIVGSIRHENVVELKAYY 388
LG G G+ K ++ ++L + + + ++++++ +V +
Sbjct: 24 LGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 83
Query: 389 YSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKL 448
YS E + ++ GS+ +L + RIP + ++
Sbjct: 84 YSDGEISICMEHMDGGSLDQVLKEAK---RIPEE----ILGKVSIAVLRGLAYLREKHQI 136
Query: 449 VHGNIKSSNIFLNSQQYGCVSDLGLT-TITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
+H ++K SNI +NS+ + D G++ + ++A Y APE + SD+
Sbjct: 137 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMAPERLQGTHYSVQSDI 196
Query: 508 YSFGVVLLEILTGKSPIHTTGGDEL 532
+S G+ L+E+ G+ PI EL
Sbjct: 197 WSMGLSLVELAVGRYPIPPPDAKEL 221
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 85/213 (39%), Gaps = 31/213 (14%)
Query: 330 EVLGKGTFGMAYKAIL--EDGTTV--VVKRLKDV-NVGK-RDFEQQMEIVGSIRHENVVE 383
EV+G+G FG Y L DG + VK L + ++G+ F + I+ H NV+
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 384 LKAY-YYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXX 442
L S+ L+V Y G + + R E P T
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP----TVKDLIGFGLQVAKGMKF 149
Query: 443 XXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLT------------TITSALAPVIARAAGY 490
K VH ++ + N L+ + V+D GL T A PV +
Sbjct: 150 LASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPV-----KW 204
Query: 491 RAPEVTDSRKATQASDVYSFGVVLLEILTGKSP 523
A E ++K T SDV+SFGV+L E++T +P
Sbjct: 205 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 83/203 (40%), Gaps = 17/203 (8%)
Query: 330 EVLGKGTFG---MAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKA 386
+ LG+G +G +A + E+ V + +K + ++++ I + HENVV+
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 71
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXX 446
+ + + + +Y S G + + + G +P
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIG---MP-----EPDAQRFFHQLMAGVVYLHGI 123
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTI-----TSALAPVIARAAGYRAPEVTDSRK- 500
+ H +IK N+ L+ + +SD GL T+ L + Y APE+ R+
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 501 ATQASDVYSFGVVLLEILTGKSP 523
+ DV+S G+VL +L G+ P
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 85/213 (39%), Gaps = 31/213 (14%)
Query: 330 EVLGKGTFGMAYKAIL--EDGTTV--VVKRLKDV-NVGK-RDFEQQMEIVGSIRHENVVE 383
EV+G+G FG Y L DG + VK L + ++G+ F + I+ H NV+
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 384 LKAY-YYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXX 442
L S+ L+V Y G + + R E P T
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP----TVKDLIGFGLQVAKGMKY 148
Query: 443 XXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLT------------TITSALAPVIARAAGY 490
K VH ++ + N L+ + V+D GL T A PV +
Sbjct: 149 LASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV-----KW 203
Query: 491 RAPEVTDSRKATQASDVYSFGVVLLEILTGKSP 523
A E ++K T SDV+SFGV+L E++T +P
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 85/213 (39%), Gaps = 31/213 (14%)
Query: 330 EVLGKGTFGMAYKAIL--EDGTTV--VVKRLKDV-NVGK-RDFEQQMEIVGSIRHENVVE 383
EV+G+G FG Y L DG + VK L + ++G+ F + I+ H NV+
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 384 LKAY-YYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXX 442
L S+ L+V Y G + + R E P T
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP----TVKDLIGFGLQVAKGMKF 148
Query: 443 XXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLT------------TITSALAPVIARAAGY 490
K VH ++ + N L+ + V+D GL T A PV +
Sbjct: 149 LASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV-----KW 203
Query: 491 RAPEVTDSRKATQASDVYSFGVVLLEILTGKSP 523
A E ++K T SDV+SFGV+L E++T +P
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 85/213 (39%), Gaps = 31/213 (14%)
Query: 330 EVLGKGTFGMAYKAIL--EDGTTV--VVKRLKDV-NVGK-RDFEQQMEIVGSIRHENVVE 383
EV+G+G FG Y L DG + VK L + ++G+ F + I+ H NV+
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 384 LKAY-YYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXX 442
L S+ L+V Y G + + R E P T
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP----TVKDLIGFGLQVAKGMKF 146
Query: 443 XXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLT------------TITSALAPVIARAAGY 490
K VH ++ + N L+ + V+D GL T A PV +
Sbjct: 147 LASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV-----KW 201
Query: 491 RAPEVTDSRKATQASDVYSFGVVLLEILTGKSP 523
A E ++K T SDV+SFGV+L E++T +P
Sbjct: 202 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 85/213 (39%), Gaps = 31/213 (14%)
Query: 330 EVLGKGTFGMAYKAIL--EDGTTV--VVKRLKDV-NVGK-RDFEQQMEIVGSIRHENVVE 383
EV+G+G FG Y L DG + VK L + ++G+ F + I+ H NV+
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 92
Query: 384 LKAY-YYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXX 442
L S+ L+V Y G + + R E P T
Sbjct: 93 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP----TVKDLIGFGLQVAKGMKY 145
Query: 443 XXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLT------------TITSALAPVIARAAGY 490
K VH ++ + N L+ + V+D GL T A PV +
Sbjct: 146 LASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV-----KW 200
Query: 491 RAPEVTDSRKATQASDVYSFGVVLLEILTGKSP 523
A E ++K T SDV+SFGV+L E++T +P
Sbjct: 201 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 85/213 (39%), Gaps = 31/213 (14%)
Query: 330 EVLGKGTFGMAYKAIL--EDGTTV--VVKRLKDV-NVGK-RDFEQQMEIVGSIRHENVVE 383
EV+G+G FG Y L DG + VK L + ++G+ F + I+ H NV+
Sbjct: 55 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 114
Query: 384 LKAY-YYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXX 442
L S+ L+V Y G + + R E P T
Sbjct: 115 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP----TVKDLIGFGLQVAKGMKY 167
Query: 443 XXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLT------------TITSALAPVIARAAGY 490
K VH ++ + N L+ + V+D GL T A PV +
Sbjct: 168 LASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV-----KW 222
Query: 491 RAPEVTDSRKATQASDVYSFGVVLLEILTGKSP 523
A E ++K T SDV+SFGV+L E++T +P
Sbjct: 223 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 85/213 (39%), Gaps = 31/213 (14%)
Query: 330 EVLGKGTFGMAYKAIL--EDGTTV--VVKRLKDV-NVGK-RDFEQQMEIVGSIRHENVVE 383
EV+G+G FG Y L DG + VK L + ++G+ F + I+ H NV+
Sbjct: 41 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 100
Query: 384 LKAY-YYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXX 442
L S+ L+V Y G + + R E P T
Sbjct: 101 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP----TVKDLIGFGLQVAKGMKF 153
Query: 443 XXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLT------------TITSALAPVIARAAGY 490
K VH ++ + N L+ + V+D GL T A PV +
Sbjct: 154 LASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV-----KW 208
Query: 491 RAPEVTDSRKATQASDVYSFGVVLLEILTGKSP 523
A E ++K T SDV+SFGV+L E++T +P
Sbjct: 209 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 85/213 (39%), Gaps = 31/213 (14%)
Query: 330 EVLGKGTFGMAYKAIL--EDGTTV--VVKRLKDV-NVGK-RDFEQQMEIVGSIRHENVVE 383
EV+G+G FG Y L DG + VK L + ++G+ F + I+ H NV+
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 384 LKAY-YYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXX 442
L S+ L+V Y G + + R E P T
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP----TVKDLIGFGLQVAKGMKF 148
Query: 443 XXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLT------------TITSALAPVIARAAGY 490
K VH ++ + N L+ + V+D GL T A PV +
Sbjct: 149 LASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV-----KW 203
Query: 491 RAPEVTDSRKATQASDVYSFGVVLLEILTGKSP 523
A E ++K T SDV+SFGV+L E++T +P
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 85/213 (39%), Gaps = 31/213 (14%)
Query: 330 EVLGKGTFGMAYKAIL--EDGTTV--VVKRLKDV-NVGK-RDFEQQMEIVGSIRHENVVE 383
EV+G+G FG Y L DG + VK L + ++G+ F + I+ H NV+
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 384 LKAY-YYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXX 442
L S+ L+V Y G + + R E P T
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP----TVKDLIGFGLQVAKGMKF 149
Query: 443 XXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLT------------TITSALAPVIARAAGY 490
K VH ++ + N L+ + V+D GL T A PV +
Sbjct: 150 LASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV-----KW 204
Query: 491 RAPEVTDSRKATQASDVYSFGVVLLEILTGKSP 523
A E ++K T SDV+SFGV+L E++T +P
Sbjct: 205 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 83/203 (40%), Gaps = 17/203 (8%)
Query: 330 EVLGKGTFG---MAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKA 386
+ LG+G +G +A + E+ V + +K + ++++ I + HENVV+
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYG 72
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXX 446
+ + + + +Y S G + + + G +P
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIG---MP-----EPDAQRFFHQLMAGVVYLHGI 124
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTI-----TSALAPVIARAAGYRAPEVTDSRK- 500
+ H +IK N+ L+ + +SD GL T+ L + Y APE+ R+
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 501 ATQASDVYSFGVVLLEILTGKSP 523
+ DV+S G+VL +L G+ P
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 79/198 (39%), Gaps = 12/198 (6%)
Query: 332 LGKGTFGMAYKAILEDGT-TVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYS 390
LG G +G Y + + + TV VK LK+ + +F ++ ++ I+H N+V+L
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTL 99
Query: 391 KDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVH 450
+ +V +Y G++ L E T +H
Sbjct: 100 EPPFYIVTEYMPYGNLLDYLRECNREEV------TAVVLLYMATQISSAMEYLEKKNFIH 153
Query: 451 GNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA----GYRAPEVTDSRKATQASD 506
++ + N + V+D GL+ + + A + APE + SD
Sbjct: 154 RDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSD 213
Query: 507 VYSFGVVLLEILT-GKSP 523
V++FGV+L EI T G SP
Sbjct: 214 VWAFGVLLWEIATYGMSP 231
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 85/213 (39%), Gaps = 31/213 (14%)
Query: 330 EVLGKGTFGMAYKAIL--EDGTTV--VVKRLKDV-NVGK-RDFEQQMEIVGSIRHENVVE 383
EV+G+G FG Y L DG + VK L + ++G+ F + I+ H NV+
Sbjct: 28 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 87
Query: 384 LKAY-YYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXX 442
L S+ L+V Y G + + R E P T
Sbjct: 88 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP----TVKDLIGFGLQVAKGMKY 140
Query: 443 XXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLT------------TITSALAPVIARAAGY 490
K VH ++ + N L+ + V+D GL T A PV +
Sbjct: 141 LASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV-----KW 195
Query: 491 RAPEVTDSRKATQASDVYSFGVVLLEILTGKSP 523
A E ++K T SDV+SFGV+L E++T +P
Sbjct: 196 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 85/213 (39%), Gaps = 31/213 (14%)
Query: 330 EVLGKGTFGMAYKAIL--EDGTTV--VVKRLKDV-NVGK-RDFEQQMEIVGSIRHENVVE 383
EV+G+G FG Y L DG + VK L + ++G+ F + I+ H NV+
Sbjct: 54 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 113
Query: 384 LKAY-YYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXX 442
L S+ L+V Y G + + R E P T
Sbjct: 114 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP----TVKDLIGFGLQVAKGMKY 166
Query: 443 XXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLT------------TITSALAPVIARAAGY 490
K VH ++ + N L+ + V+D GL T A PV +
Sbjct: 167 LASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV-----KW 221
Query: 491 RAPEVTDSRKATQASDVYSFGVVLLEILTGKSP 523
A E ++K T SDV+SFGV+L E++T +P
Sbjct: 222 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 85/213 (39%), Gaps = 31/213 (14%)
Query: 330 EVLGKGTFGMAYKAIL--EDGTTV--VVKRLKDV-NVGK-RDFEQQMEIVGSIRHENVVE 383
EV+G+G FG Y L DG + VK L + ++G+ F + I+ H NV+
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 384 LKAY-YYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXX 442
L S+ L+V Y G + + R E P T
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP----TVKDLIGFGLQVAKGMKY 146
Query: 443 XXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLT------------TITSALAPVIARAAGY 490
K VH ++ + N L+ + V+D GL T A PV +
Sbjct: 147 LASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV-----KW 201
Query: 491 RAPEVTDSRKATQASDVYSFGVVLLEILTGKSP 523
A E ++K T SDV+SFGV+L E++T +P
Sbjct: 202 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 83/203 (40%), Gaps = 17/203 (8%)
Query: 330 EVLGKGTFG---MAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKA 386
+ LG+G +G +A + E+ V + +K + ++++ I + HENVV+
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 72
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXX 446
+ + + + +Y S G + + + G +P
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIG---MP-----EPDAQRFFHQLMAGVVYLHGI 124
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTI-----TSALAPVIARAAGYRAPEVTDSRK- 500
+ H +IK N+ L+ + +SD GL T+ L + Y APE+ R+
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 184
Query: 501 ATQASDVYSFGVVLLEILTGKSP 523
+ DV+S G+VL +L G+ P
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 85/213 (39%), Gaps = 31/213 (14%)
Query: 330 EVLGKGTFGMAYKAIL--EDGTTV--VVKRLKDV-NVGK-RDFEQQMEIVGSIRHENVVE 383
EV+G+G FG Y L DG + VK L + ++G+ F + I+ H NV+
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 90
Query: 384 LKAY-YYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXX 442
L S+ L+V Y G + + R E P T
Sbjct: 91 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP----TVKDLIGFGLQVAKGMKY 143
Query: 443 XXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLT------------TITSALAPVIARAAGY 490
K VH ++ + N L+ + V+D GL T A PV +
Sbjct: 144 LASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV-----KW 198
Query: 491 RAPEVTDSRKATQASDVYSFGVVLLEILTGKSP 523
A E ++K T SDV+SFGV+L E++T +P
Sbjct: 199 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 66/162 (40%), Gaps = 12/162 (7%)
Query: 366 FEQQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDT 425
FE+++ + H+N+V + D +V +Y ++S + E PL DT
Sbjct: 58 FEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYI-----ESHGPLSVDT 112
Query: 426 XXXXXXXXXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPV-- 483
++VH +IK NI ++S + + D G+ S +
Sbjct: 113 AINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQT 169
Query: 484 --IARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSP 523
+ Y +PE + +D+YS G+VL E+L G+ P
Sbjct: 170 NHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPP 211
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITS-----ALAPVIARAAGYRAPEVTDSRKAT 502
++H ++K NI LN + ++D G + S A A A Y +PE+ + A
Sbjct: 129 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 188
Query: 503 QASDVYSFGVVLLEILTGKSPIHTTGGDELV 533
++SD+++ G ++ +++ G P G + L+
Sbjct: 189 KSSDLWALGCIIYQLVAGLPPFR-AGNEYLI 218
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 83/203 (40%), Gaps = 17/203 (8%)
Query: 330 EVLGKGTFG---MAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKA 386
+ LG+G +G +A + E+ V + +K + ++++ I + HENVV+
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 71
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXX 446
+ + + + +Y S G + + + G +P
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIG---MP-----EPDAQRFFHQLMAGVVYLHGI 123
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTI-----TSALAPVIARAAGYRAPEVTDSRK- 500
+ H +IK N+ L+ + +SD GL T+ L + Y APE+ R+
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 501 ATQASDVYSFGVVLLEILTGKSP 523
+ DV+S G+VL +L G+ P
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELP 206
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITS-----ALAPVIARAAGYRAPEVTDSRKAT 502
++H ++K NI LN + ++D G + S A A A Y +PE+ + A
Sbjct: 130 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 189
Query: 503 QASDVYSFGVVLLEILTGKSPIHTTGGDELV 533
++SD+++ G ++ +++ G P G + L+
Sbjct: 190 KSSDLWALGCIIYQLVAGLPPFR-AGNEYLI 219
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 85/213 (39%), Gaps = 31/213 (14%)
Query: 330 EVLGKGTFGMAYKAIL--EDGTTV--VVKRLKDV-NVGK-RDFEQQMEIVGSIRHENVVE 383
EV+G+G FG Y L DG + VK L + ++G+ F + I+ H NV+
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 384 LKAY-YYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXX 442
L S+ L+V Y G + + R E P T
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP----TVKDLIGFGLQVAKGMKY 148
Query: 443 XXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLT------------TITSALAPVIARAAGY 490
K VH ++ + N L+ + V+D GL T A PV +
Sbjct: 149 LASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV-----KW 203
Query: 491 RAPEVTDSRKATQASDVYSFGVVLLEILTGKSP 523
A E ++K T SDV+SFGV+L E++T +P
Sbjct: 204 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITS-----ALAPVIARAAGYRAPEVTDSRKAT 502
++H ++K NI LN + ++D G + S A A A Y +PE+ + A
Sbjct: 131 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 190
Query: 503 QASDVYSFGVVLLEILTGKSPIHTTGGDELV 533
++SD+++ G ++ +++ G P G + L+
Sbjct: 191 KSSDLWALGCIIYQLVAGLPPFR-AGNEYLI 220
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITS-----ALAPVIARAAGYRAPEVTDSRKAT 502
++H ++K NI LN + ++D G + S A A A Y +PE+ + A
Sbjct: 128 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 187
Query: 503 QASDVYSFGVVLLEILTGKSPIHTTGGDELV 533
++SD+++ G ++ +++ G P G + L+
Sbjct: 188 KSSDLWALGCIIYQLVAGLPPFR-AGNEYLI 217
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA-GYRAPEVTDSRKATQAS- 505
+V+ ++K +NI L+ + +SDLGL S P + GY APEV A +S
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSA 372
Query: 506 DVYSFGVVLLEILTGKSPI 524
D +S G +L ++L G SP
Sbjct: 373 DWFSLGCMLFKLLRGHSPF 391
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA-GYRAPEVTDSRKATQAS- 505
+V+ ++K +NI L+ + +SDLGL S P + GY APEV A +S
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSA 372
Query: 506 DVYSFGVVLLEILTGKSPI 524
D +S G +L ++L G SP
Sbjct: 373 DWFSLGCMLFKLLRGHSPF 391
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA-GYRAPEVTDSRKATQAS- 505
+V+ ++K +NI L+ + +SDLGL S P + GY APEV A +S
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSA 372
Query: 506 DVYSFGVVLLEILTGKSPI--HTT 527
D +S G +L ++L G SP H T
Sbjct: 373 DWFSLGCMLFKLLRGHSPFRQHKT 396
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA-GYRAPEVTDSRKATQAS- 505
+V+ ++K +NI L+ + +SDLGL S P + GY APEV A +S
Sbjct: 312 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSA 371
Query: 506 DVYSFGVVLLEILTGKSPI--HTT 527
D +S G +L ++L G SP H T
Sbjct: 372 DWFSLGCMLFKLLRGHSPFRQHKT 395
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 85/213 (39%), Gaps = 31/213 (14%)
Query: 330 EVLGKGTFGMAYKAIL--EDGTTV--VVKRLKDV-NVGK-RDFEQQMEIVGSIRHENVVE 383
EV+G+G FG Y L DG + VK L + ++G+ F + I+ H NV+
Sbjct: 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 154
Query: 384 LKAYYY-SKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXX 442
L S+ L+V Y G + + R E P T
Sbjct: 155 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP----TVKDLIGFGLQVAKGMKF 207
Query: 443 XXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLT------------TITSALAPVIARAAGY 490
K VH ++ + N L+ + V+D GL T A PV +
Sbjct: 208 LASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV-----KW 262
Query: 491 RAPEVTDSRKATQASDVYSFGVVLLEILTGKSP 523
A E ++K T SDV+SFGV+L E++T +P
Sbjct: 263 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITS-----ALAPVIARAAGYRAPEVTDSRKAT 502
++H ++K NI LN + ++D G + S A A A Y +PE+ + A
Sbjct: 135 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 194
Query: 503 QASDVYSFGVVLLEILTGKSPI 524
++SD+++ G ++ +++ G P
Sbjct: 195 KSSDLWALGCIIYQLVAGLPPF 216
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 85/213 (39%), Gaps = 31/213 (14%)
Query: 330 EVLGKGTFGMAYKAIL--EDGTTV--VVKRLKDV-NVGK-RDFEQQMEIVGSIRHENVVE 383
EV+G+G FG Y L DG + VK L + ++G+ F + I+ H NV+
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 384 LKAY-YYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXX 442
L S+ L+V Y G + + R E P T
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP----TVKDLIGFGLQVAKGMKY 147
Query: 443 XXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLT------------TITSALAPVIARAAGY 490
K VH ++ + N L+ + V+D GL T A PV +
Sbjct: 148 LASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV-----KW 202
Query: 491 RAPEVTDSRKATQASDVYSFGVVLLEILTGKSP 523
A E ++K T SDV+SFGV+L E++T +P
Sbjct: 203 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITS-----ALAPVIARAAGYRAPEVTDSRKAT 502
++H ++K NI LN + ++D G + S A A A Y +PE+ + A
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSAC 210
Query: 503 QASDVYSFGVVLLEILTGKSPI 524
++SD+++ G ++ +++ G P
Sbjct: 211 KSSDLWALGCIIYQLVAGLPPF 232
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 89/234 (38%), Gaps = 19/234 (8%)
Query: 329 AEVLGKGTFGMAYKAI-LEDGTTVVVKRLKDV-------NVGKRDFEQQMEIVGSIRHEN 380
EV+GKG F + + I E G VK + DV + D +++ I ++H +
Sbjct: 29 CEVIGKGAFSVVRRCINRETGQQFAVK-IVDVAKFTSSPGLSTEDLKREASICHMLKHPH 87
Query: 381 VVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXX 440
+VEL Y S MV+++ + + G + +
Sbjct: 88 IVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVY----SEAVASHYMRQILEAL 143
Query: 441 XXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG------YRAPE 494
++H ++K N+ L S++ LG + L A G + APE
Sbjct: 144 RYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPE 203
Query: 495 VTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWT 548
V + DV+ GV+L +L+G P + T +++ + + +W+
Sbjct: 204 VVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWS 257
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 83/203 (40%), Gaps = 17/203 (8%)
Query: 330 EVLGKGTFG---MAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKA 386
+ LG+G +G +A + E+ V + +K + ++++ I + HENVV+
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXX 446
+ + + + +Y S G + + + G +P
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIG---MP-----EPDAQRFFHQLMAGVVYLHGI 123
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTI-----TSALAPVIARAAGYRAPEVTDSRK- 500
+ H +IK N+ L+ + +SD GL T+ L + Y APE+ R+
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 501 ATQASDVYSFGVVLLEILTGKSP 523
+ DV+S G+VL +L G+ P
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 83/203 (40%), Gaps = 17/203 (8%)
Query: 330 EVLGKGTFG---MAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKA 386
+ LG+G +G +A + E+ V + +K + ++++ I + HENVV+
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXX 446
+ + + + +Y S G + + + G +P
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIG---MP-----EPDAQRFFHQLMAGVVYLHGI 123
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTI-----TSALAPVIARAAGYRAPEVTDSRK- 500
+ H +IK N+ L+ + +SD GL T+ L + Y APE+ R+
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 501 ATQASDVYSFGVVLLEILTGKSP 523
+ DV+S G+VL +L G+ P
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITS-----ALAPVIARAAGYRAPEVTDSRKAT 502
++H ++K NI LN + ++D G + S A A A Y +PE+ + A+
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSAS 212
Query: 503 QASDVYSFGVVLLEILTGKSPI 524
++SD+++ G ++ +++ G P
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPF 234
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 83/203 (40%), Gaps = 17/203 (8%)
Query: 330 EVLGKGTFG---MAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKA 386
+ LG+G +G +A + E+ V + +K + ++++ I + HENVV+
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXX 446
+ + + + +Y S G + + + G +P
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIG---MP-----EPDAQRFFHQLMAGVVYLHGI 124
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTI-----TSALAPVIARAAGYRAPEVTDSRK- 500
+ H +IK N+ L+ + +SD GL T+ L + Y APE+ R+
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 501 ATQASDVYSFGVVLLEILTGKSP 523
+ DV+S G+VL +L G+ P
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 113/282 (40%), Gaps = 46/282 (16%)
Query: 330 EVLGKGTFGMAYKAILED--------GTTVVVKRLKDVNVGKRD-FEQQMEIVGSIRHEN 380
E LG+GTF +K + + T V++K L + + F + ++ + H++
Sbjct: 14 ESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKH 73
Query: 381 VVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXX 440
+V DE ++V ++ GS+ L ++ + I + W
Sbjct: 74 LVLNYGVCVCGDENILVQEFVKFGSLDTYL--KKNKNCINILWKLEVAKQLAAAMHFLEE 131
Query: 441 XXXXXXKLVHGNIKSSNIFLNSQQ--------YGCVSDLGLTTITSALAPVIARAAGYRA 492
L+HGN+ + NI L ++ + +SD G++ IT ++ +
Sbjct: 132 NT-----LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS-ITVLPKDILQERIPWVP 185
Query: 493 PEVTDSRKATQ-ASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEV 551
PE ++ K A+D +SFG L EI +GGD+ + S + + +
Sbjct: 186 PECIENPKNLNLATDKWSFGTTLWEI--------CSGGDKPL-------SALDSQRKLQF 230
Query: 552 F-DVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592
+ D L P + E+ + +C+ PD RP ++R
Sbjct: 231 YEDRHQLPAP----KAAELANLINNCMDYEPDHRPSFRAIIR 268
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 83/203 (40%), Gaps = 17/203 (8%)
Query: 330 EVLGKGTFG---MAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKA 386
+ LG+G +G +A + E+ V + +K + ++++ I + HENVV+
Sbjct: 11 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 70
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXX 446
+ + + + +Y S G + + + G +P
Sbjct: 71 HRREGNIQYLFLEYCSGGELFDRIEPDIG---MP-----EPDAQRFFHQLMAGVVYLHGI 122
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTI-----TSALAPVIARAAGYRAPEVTDSRK- 500
+ H +IK N+ L+ + +SD GL T+ L + Y APE+ R+
Sbjct: 123 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 182
Query: 501 ATQASDVYSFGVVLLEILTGKSP 523
+ DV+S G+VL +L G+ P
Sbjct: 183 HAEPVDVWSCGIVLTAMLAGELP 205
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 83/203 (40%), Gaps = 17/203 (8%)
Query: 330 EVLGKGTFG---MAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKA 386
+ LG+G +G +A + E+ V + +K + ++++ I + HENVV+
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXX 446
+ + + + +Y S G + + + G +P
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIG---MP-----EPDAQRFFHQLMAGVVYLHGI 124
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTI-----TSALAPVIARAAGYRAPEVTDSRK- 500
+ H +IK N+ L+ + +SD GL T+ L + Y APE+ R+
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 501 ATQASDVYSFGVVLLEILTGKSP 523
+ DV+S G+VL +L G+ P
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITS-----ALAPVIARAAGYRAPEVTDSRKAT 502
++H ++K NI LN + ++D G + S A A A Y +PE+ + A
Sbjct: 158 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 217
Query: 503 QASDVYSFGVVLLEILTGKSPI 524
++SD+++ G ++ +++ G P
Sbjct: 218 KSSDLWALGCIIYQLVAGLPPF 239
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITS-----ALAPVIARAAGYRAPEVTDSRKAT 502
++H ++K NI LN + ++D G + S A A A Y +PE+ + A
Sbjct: 150 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 209
Query: 503 QASDVYSFGVVLLEILTGKSPI 524
++SD+++ G ++ +++ G P
Sbjct: 210 KSSDLWALGCIIYQLVAGLPPF 231
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 83/203 (40%), Gaps = 17/203 (8%)
Query: 330 EVLGKGTFG---MAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKA 386
+ LG+G +G +A + E+ V + +K + ++++ I + HENVV+
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXX 446
+ + + + +Y S G + + + G +P
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIG---MP-----EPDAQRFFHQLMAGVVYLHGI 123
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTI-----TSALAPVIARAAGYRAPEVTDSRK- 500
+ H +IK N+ L+ + +SD GL T+ L + Y APE+ R+
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 501 ATQASDVYSFGVVLLEILTGKSP 523
+ DV+S G+VL +L G+ P
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 83/203 (40%), Gaps = 17/203 (8%)
Query: 330 EVLGKGTFG---MAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKA 386
+ LG+G +G +A + E+ V + +K + ++++ I + HENVV+
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXX 446
+ + + + +Y S G + + + G +P
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIG---MP-----EPDAQRFFHQLMAGVVYLHGI 124
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTI-----TSALAPVIARAAGYRAPEVTDSRK- 500
+ H +IK N+ L+ + +SD GL T+ L + Y APE+ R+
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 501 ATQASDVYSFGVVLLEILTGKSP 523
+ DV+S G+VL +L G+ P
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 83/203 (40%), Gaps = 17/203 (8%)
Query: 330 EVLGKGTFG---MAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKA 386
+ LG+G +G +A + E+ V + +K + ++++ I + HENVV+
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXX 446
+ + + + +Y S G + + + G +P
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIG---MP-----EPDAQRFFHQLMAGVVYLHGI 123
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTI-----TSALAPVIARAAGYRAPEVTDSRK- 500
+ H +IK N+ L+ + +SD GL T+ L + Y APE+ R+
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 501 ATQASDVYSFGVVLLEILTGKSP 523
+ DV+S G+VL +L G+ P
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 106/278 (38%), Gaps = 43/278 (15%)
Query: 329 AEVLGKGTFGMAYKAIL--EDGTT--VVVKRLKDVNVGKRDFEQQMEIVGSIR---HENV 381
++LG+G FG + L EDGT+ V VK +K N +R+ E+ + ++ H NV
Sbjct: 39 GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNV 98
Query: 382 VELKAYYYSKDEK-----LMVYDYYSLGSV-SAMLHS--ERGEGRIPLDWDTXXXXXXXX 433
+ L + +++ + G + + +L+S E G IPL
Sbjct: 99 IRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQ-----TLLKFM 153
Query: 434 XXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTT-ITSALAPVIARAAG--- 489
+H ++ + N L CV+D GL+ I S R A
Sbjct: 154 VDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPV 213
Query: 490 -YRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEW 547
+ A E R T SDV++FGV + EI T G +P E+ + H
Sbjct: 214 KWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGH------- 266
Query: 548 TAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRP 585
R E+ + E+ +I SC P RP
Sbjct: 267 ----------RLKQPEDCLDELYEIMYSCWRTDPLDRP 294
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 83/203 (40%), Gaps = 17/203 (8%)
Query: 330 EVLGKGTFG---MAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKA 386
+ LG+G +G +A + E+ V + +K + ++++ I + HENVV+
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXX 446
+ + + + +Y S G + + + G +P
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIG---MP-----EPDAQRFFHQLMAGVVYLHGI 123
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTI-----TSALAPVIARAAGYRAPEVTDSRK- 500
+ H +IK N+ L+ + +SD GL T+ L + Y APE+ R+
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 501 ATQASDVYSFGVVLLEILTGKSP 523
+ DV+S G+VL +L G+ P
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 81/204 (39%), Gaps = 19/204 (9%)
Query: 331 VLGKGTFGMAYKAILE----DGTTVVVKRLK-DVNV-GKRDFEQQMEIVGSIRHENVVEL 384
+LG+G FG Y+ + + V VK K D + K F + I+ ++ H ++V+L
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 385 KAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXX 444
++ ++ + Y G + L + ++
Sbjct: 75 IGII-EEEPTWIIMELYPYGELGHYLERNKNSLKV-------LTLVLYSLQICKAMAYLE 126
Query: 445 XXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITS----ALAPVIARAAGYRAPEVTDSRK 500
VH +I NI + S + + D GL+ A V + +PE + R+
Sbjct: 127 SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRR 186
Query: 501 ATQASDVYSFGVVLLEILT-GKSP 523
T ASDV+ F V + EIL+ GK P
Sbjct: 187 FTTASDVWMFAVCMWEILSFGKQP 210
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITS-----ALAPVIARAAGYRAPEVTDSRKAT 502
++H ++K NI LN + ++D G + S A A A Y +PE+ + A
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 210
Query: 503 QASDVYSFGVVLLEILTGKSPI 524
++SD+++ G ++ +++ G P
Sbjct: 211 KSSDLWALGCIIYQLVAGLPPF 232
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITS-----ALAPVIARAAGYRAPEVTDSRKAT 502
++H ++K NI LN + ++D G + S A A A Y +PE+ + A
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 210
Query: 503 QASDVYSFGVVLLEILTGKSPI 524
++SD+++ G ++ +++ G P
Sbjct: 211 KSSDLWALGCIIYQLVAGLPPF 232
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITS-----ALAPVIARAAGYRAPEVTDSRKAT 502
++H ++K NI LN + ++D G + S A A A Y +PE+ + A
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 210
Query: 503 QASDVYSFGVVLLEILTGKSPI 524
++SD+++ G ++ +++ G P
Sbjct: 211 KSSDLWALGCIIYQLVAGLPPF 232
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITS-----ALAPVIARAAGYRAPEVTDSRKAT 502
++H ++K NI LN + ++D G + S A A A Y +PE+ + A
Sbjct: 154 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 213
Query: 503 QASDVYSFGVVLLEILTGKSPI 524
++SD+++ G ++ +++ G P
Sbjct: 214 KSSDLWALGCIIYQLVAGLPPF 235
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 83/203 (40%), Gaps = 17/203 (8%)
Query: 330 EVLGKGTFG---MAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKA 386
+ LG+G +G +A + E+ V + +K + ++++ I + HENVV+
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXX 446
+ + + + +Y S G + + + G +P
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIG---MP-----EPDAQRFFHQLMAGVVYLHGI 124
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTI-----TSALAPVIARAAGYRAPEVTDSRK- 500
+ H +IK N+ L+ + +SD GL T+ L + Y APE+ R+
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 501 ATQASDVYSFGVVLLEILTGKSP 523
+ DV+S G+VL +L G+ P
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
L++ ++K N+ ++ Q Y V+D G +A Y APE+ S+ +A D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLAGTPEYLAPEIILSKGYNKAVDW 221
Query: 508 YSFGVVLLEILTGKSPI 524
++ GV++ E+ G P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 83/203 (40%), Gaps = 17/203 (8%)
Query: 330 EVLGKGTFG---MAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKA 386
+ LG+G +G +A + E+ V + +K + ++++ I + HENVV+
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXX 446
+ + + + +Y S G + + + G +P
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIG---MP-----EPDAQRFFHQLMAGVVYLHGI 124
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTI-----TSALAPVIARAAGYRAPEVTDSRK- 500
+ H +IK N+ L+ + +SD GL T+ L + Y APE+ R+
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 501 ATQASDVYSFGVVLLEILTGKSP 523
+ DV+S G+VL +L G+ P
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITS-----ALAPVIARAAGYRAPEVTDSRKAT 502
++H ++K NI LN + ++D G + S A A A Y +PE+ + A
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 212
Query: 503 QASDVYSFGVVLLEILTGKSPI 524
++SD+++ G ++ +++ G P
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPF 234
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 83/203 (40%), Gaps = 17/203 (8%)
Query: 330 EVLGKGTFG---MAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKA 386
+ LG+G +G +A + E+ V + +K + ++++ I + HENVV+
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXX 446
+ + + + +Y S G + + + G +P
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIG---MP-----EPDAQRFFHQLMAGVVYLHGI 123
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTI-----TSALAPVIARAAGYRAPEVTDSRK- 500
+ H +IK N+ L+ + +SD GL T+ L + Y APE+ R+
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 501 ATQASDVYSFGVVLLEILTGKSP 523
+ DV+S G+VL +L G+ P
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELP 206
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 83/203 (40%), Gaps = 17/203 (8%)
Query: 330 EVLGKGTFG---MAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKA 386
+ LG+G +G +A + E+ V + +K + ++++ I + HENVV+
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXX 446
+ + + + +Y S G + + + G +P
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIG---MP-----EPDAQRFFHQLMAGVVYLHGI 124
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTI-----TSALAPVIARAAGYRAPEVTDSRK- 500
+ H +IK N+ L+ + +SD GL T+ L + Y APE+ R+
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 501 ATQASDVYSFGVVLLEILTGKSP 523
+ DV+S G+VL +L G+ P
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITS-----ALAPVIARAAGYRAPEVTDSRKAT 502
++H ++K NI LN + ++D G + S A A A Y +PE+ + A
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 212
Query: 503 QASDVYSFGVVLLEILTGKSPI 524
++SD+++ G ++ +++ G P
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPF 234
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITS-----ALAPVIARAAGYRAPEVTDSRKAT 502
++H ++K NI LN + ++D G + S A A A Y +PE+ + A
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 212
Query: 503 QASDVYSFGVVLLEILTGKSPI 524
++SD+++ G ++ +++ G P
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPF 234
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 87/221 (39%), Gaps = 21/221 (9%)
Query: 314 GCNYAFDLEDLLRASAEVLGKGTFGMAYKAILE----DGTTVVVKRLK-DVNV-GKRDFE 367
G Y ED++ +LG+G FG Y+ + + V VK K D + K F
Sbjct: 4 GPQYGIAREDVVLN--RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFM 61
Query: 368 QQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXX 427
+ I+ ++ H ++V+L ++ ++ + Y G + L + ++
Sbjct: 62 SEAVIMKNLDHPHIVKLIGII-EEEPTWIIMELYPYGELGHYLERNKNSLKV-------L 113
Query: 428 XXXXXXXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITS----ALAPV 483
VH +I NI + S + + D GL+ A V
Sbjct: 114 TLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASV 173
Query: 484 IARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSP 523
+ +PE + R+ T ASDV+ F V + EIL+ GK P
Sbjct: 174 TRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP 214
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 81/204 (39%), Gaps = 19/204 (9%)
Query: 331 VLGKGTFGMAYKAILE----DGTTVVVKRLK-DVNV-GKRDFEQQMEIVGSIRHENVVEL 384
+LG+G FG Y+ + + V VK K D + K F + I+ ++ H ++V+L
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 90
Query: 385 KAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXX 444
++ ++ + Y G + L + ++
Sbjct: 91 IGII-EEEPTWIIMELYPYGELGHYLERNKNSLKV-------LTLVLYSLQICKAMAYLE 142
Query: 445 XXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITS----ALAPVIARAAGYRAPEVTDSRK 500
VH +I NI + S + + D GL+ A V + +PE + R+
Sbjct: 143 SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRR 202
Query: 501 ATQASDVYSFGVVLLEILT-GKSP 523
T ASDV+ F V + EIL+ GK P
Sbjct: 203 FTTASDVWMFAVCMWEILSFGKQP 226
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITS-----ALAPVIARAAGYRAPEVTDSRKAT 502
++H ++K NI LN + ++D G + S A A A Y +PE+ + A
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 212
Query: 503 QASDVYSFGVVLLEILTGKSPI 524
++SD+++ G ++ +++ G P
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPF 234
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITS-----ALAPVIARAAGYRAPEVTDSRKAT 502
++H ++K NI LN + ++D G + S A A A Y +PE+ + A
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAX 212
Query: 503 QASDVYSFGVVLLEILTGKSPI 524
++SD+++ G ++ +++ G P
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPF 234
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 84/201 (41%), Gaps = 18/201 (8%)
Query: 330 EVLGKGTFGMAYKAILED-GTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHE------NVV 382
+V+GKG+FG KA V +K +++ R +++ I+ +R + NV+
Sbjct: 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVI 162
Query: 383 ELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEG-RIPLDWDTXXXXXXXXXXXXXXXX 441
+ + ++ M ++ S+ ++ ++ + +G +PL
Sbjct: 163 HMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPL-------VRKFAHSILQCLD 214
Query: 442 XXXXXKLVHGNIKSSNIFLNSQQYGCVS--DLGLTTITSALAPVIARAAGYRAPEVTDSR 499
+++H ++K NI L Q + D G + ++ YRAPEV
Sbjct: 215 ALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRFYRAPEVILGA 274
Query: 500 KATQASDVYSFGVVLLEILTG 520
+ D++S G +L E+LTG
Sbjct: 275 RYGMPIDMWSLGCILAELLTG 295
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 84/201 (41%), Gaps = 18/201 (8%)
Query: 330 EVLGKGTFGMAYKAILED-GTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHE------NVV 382
+V+GKG+FG KA V +K +++ R +++ I+ +R + NV+
Sbjct: 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVI 162
Query: 383 ELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEG-RIPLDWDTXXXXXXXXXXXXXXXX 441
+ + ++ M ++ S+ ++ ++ + +G +PL
Sbjct: 163 HMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPL-------VRKFAHSILQCLD 214
Query: 442 XXXXXKLVHGNIKSSNIFLNSQQYGCVS--DLGLTTITSALAPVIARAAGYRAPEVTDSR 499
+++H ++K NI L Q + D G + ++ YRAPEV
Sbjct: 215 ALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRFYRAPEVILGA 274
Query: 500 KATQASDVYSFGVVLLEILTG 520
+ D++S G +L E+LTG
Sbjct: 275 RYGMPIDMWSLGCILAELLTG 295
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITS-----ALAPVIARAAGYRAPEVTDSRKAT 502
++H ++K NI LN + ++D G + S A A A Y +PE+ + A
Sbjct: 156 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 215
Query: 503 QASDVYSFGVVLLEILTGKSPI 524
++SD+++ G ++ +++ G P
Sbjct: 216 KSSDLWALGCIIYQLVAGLPPF 237
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTT---ITSALAPVIARAAGYRAPEVTDSRKATQ 503
+++H ++K N+FLN + D GL T + Y APEV + +
Sbjct: 162 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGHSF 221
Query: 504 ASDVYSFGVVLLEILTGKSPIHTT 527
D++S G +L +L GK P T+
Sbjct: 222 EVDIWSLGCILYTLLVGKPPFETS 245
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTT---ITSALAPVIARAAGYRAPEVTDSRKATQ 503
+++H ++K N+FLN + D GL T + Y APEV + +
Sbjct: 137 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSF 196
Query: 504 ASDVYSFGVVLLEILTGKSPIHTT 527
DV+S G ++ +L GK P T+
Sbjct: 197 EVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 83/203 (40%), Gaps = 17/203 (8%)
Query: 330 EVLGKGTFG---MAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKA 386
+ LG+G +G +A + E+ V + +K + ++++ I + HENVV+
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXX 446
+ + + + +Y S G + + + G +P
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIG---MP-----EPDAQRFFHQLMAGVVYLHGI 123
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTI-----TSALAPVIARAAGYRAPEVTDSRK- 500
+ H +IK N+ L+ + +SD GL T+ L + Y APE+ R+
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 501 ATQASDVYSFGVVLLEILTGKSP 523
+ DV+S G+VL +L G+ P
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 83/203 (40%), Gaps = 17/203 (8%)
Query: 330 EVLGKGTFG---MAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKA 386
+ LG+G +G +A + E+ V + +K + ++++ I + HENVV+
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXX 446
+ + + + +Y S G + + + G +P
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIG---MP-----EPDAQRFFHQLMAGVVYLHGI 123
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTI-----TSALAPVIARAAGYRAPEVTDSRK- 500
+ H +IK N+ L+ + +SD GL T+ L + Y APE+ R+
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 501 ATQASDVYSFGVVLLEILTGKSP 523
+ DV+S G+VL +L G+ P
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITS-----ALAPVIARAAGYRAPEVTDSRKAT 502
++H ++K NI LN + ++D G + S A A A Y +PE+ + A
Sbjct: 150 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSAC 209
Query: 503 QASDVYSFGVVLLEILTGKSPI 524
++SD+++ G ++ +++ G P
Sbjct: 210 KSSDLWALGCIIYQLVAGLPPF 231
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTT---ITSALAPVIARAAGYRAPEVTDSRKATQ 503
+++H ++K N+FLN + D GL T + Y APEV + +
Sbjct: 137 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSF 196
Query: 504 ASDVYSFGVVLLEILTGKSPIHTT 527
DV+S G ++ +L GK P T+
Sbjct: 197 EVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
L++ ++K N+ ++ Q Y V+D GL + Y APE+ S+ +A D
Sbjct: 162 LIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 508 YSFGVVLLEILTGKSPI 524
++ GV++ E+ G P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 51/106 (48%), Gaps = 8/106 (7%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTT---ITSALAPVIARAAGYRAPEVTDSRKATQA 504
+++ ++K N+ L+S+ + ++D G+ Y APE+ + ++
Sbjct: 142 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKS 201
Query: 505 SDVYSFGVVLLEILTGKSPIHTTGGDELV-----HLVRWVHSVVRE 545
D ++FGV+L E+L G++P DEL H V + S+ +E
Sbjct: 202 VDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKE 247
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
L++ ++K N+ ++ Q Y V+D GL + Y APE+ S+ +A D
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 508 YSFGVVLLEILTGKSPI 524
++ GV++ E+ G P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 87/203 (42%), Gaps = 19/203 (9%)
Query: 332 LGKGTFGMAYKAILEDGTTVVVK--RLKDVNVGKRD---FEQQMEIVGSIRHENVVELKA 386
+G+G+F YK L+ TTV V L+D + K + F+++ E + ++H N+V
Sbjct: 34 IGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 387 YYYS--KDEK--LMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXX 442
+ S K +K ++V + + G++ L R +
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYLK------RFKVXKIKVLRSWCRQILKGLQFLH 146
Query: 443 XXXXKLVHGNIKSSNIFLNSQQYGC-VSDLGLTTITSA-LAPVIARAAGYRAPEVTDSRK 500
++H ++K NIF+ + DLGL T+ A A + + APE + K
Sbjct: 147 TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFXAPEXYEE-K 205
Query: 501 ATQASDVYSFGVVLLEILTGKSP 523
++ DVY+FG LE T + P
Sbjct: 206 YDESVDVYAFGXCXLEXATSEYP 228
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 76/206 (36%), Gaps = 20/206 (9%)
Query: 332 LGKGTFGMAYKAILEDGTT-------VVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVEL 384
LGKG F ++ + D T +V K L + ++ I S+ H++VV
Sbjct: 29 LGKGGFAKCFE--ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 86
Query: 385 KAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXX 444
++ D +V + S+ LH R T
Sbjct: 87 HGFFEDNDFVFVVLELCRRRSLLE-LHKRR-------KALTEPEARYYLRQIVLGCQYLH 138
Query: 445 XXKLVHGNIKSSNIFLNSQQYGCVSDLGLTT---ITSALAPVIARAAGYRAPEVTDSRKA 501
+++H ++K N+FLN + D GL T + Y APEV +
Sbjct: 139 RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGH 198
Query: 502 TQASDVYSFGVVLLEILTGKSPIHTT 527
+ DV+S G ++ +L GK P T+
Sbjct: 199 SFEVDVWSIGCIMYTLLVGKPPFETS 224
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTT---ITSALAPVIARAAGYRAPEVTDSRKATQ 503
+++H ++K N+FLN + D GL T + Y APEV + +
Sbjct: 162 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGHSF 221
Query: 504 ASDVYSFGVVLLEILTGKSPIHTT 527
D++S G +L +L GK P T+
Sbjct: 222 EVDIWSLGCILYTLLVGKPPFETS 245
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITS-----ALAPVIARAAGYRAPEVTDSRKAT 502
++H ++K NI LN + ++D G + S A A A Y +PE+ + A
Sbjct: 154 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSAC 213
Query: 503 QASDVYSFGVVLLEILTGKSPI 524
++SD+++ G ++ +++ G P
Sbjct: 214 KSSDLWALGCIIYQLVAGLPPF 235
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 80/214 (37%), Gaps = 25/214 (11%)
Query: 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLKDVN--VGKRDFEQQMEIVGSIRHENVVELKA 386
+ LG+G FG+ ++A + D +KR++ N + + ++++ + + H +V
Sbjct: 11 QCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFN 70
Query: 387 YYYSKD--EKLM-----VYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXX 439
+ K+ EKL VY Y + + GR ++
Sbjct: 71 AWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEA 130
Query: 440 XXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITS---------ALAPVIARAAG- 489
L+H ++K SNIF V D GL T P AR G
Sbjct: 131 VEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQ 190
Query: 490 -----YRAPEVTDSRKATQASDVYSFGVVLLEIL 518
Y +PE + D++S G++L E+L
Sbjct: 191 VGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 83/203 (40%), Gaps = 17/203 (8%)
Query: 330 EVLGKGTFG---MAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKA 386
+ LG+G +G +A + E+ V + +K + ++++ I + HENVV+
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXX 446
+ + + + +Y S G + + + G +P
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIG---MP-----EPDAQRFFHQLMAGVVYLHGI 123
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTI-----TSALAPVIARAAGYRAPEVTDSRK- 500
+ H +IK N+ L+ + +SD GL T+ L + Y APE+ R+
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 501 ATQASDVYSFGVVLLEILTGKSP 523
+ DV+S G+VL +L G+ P
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 109/285 (38%), Gaps = 41/285 (14%)
Query: 332 LGKGTFGMAYKAILED------GTTVVVKRLKD-VNVGKR-DFEQQMEIVGSIRHENVVE 383
LG+G+FGM Y+ D T V VK + + ++ +R +F + ++ +VV
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGE-----GRIPLDWDTXXXXXXXXXXXXX 438
L L+V + + G + + L S R E GR P T
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP---PTLQEMIQMAAEIAD 142
Query: 439 XXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-----YRAP 493
K VH N+ + N + + D G+T G + AP
Sbjct: 143 GMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 202
Query: 494 EVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVF 552
E T +SD++SFGVVL EI + + P ++++ V
Sbjct: 203 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF---------------VM 247
Query: 553 DVELLRYP-NIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIEN 596
D L P N E + +++++ C P+ RP ++V ++++
Sbjct: 248 DGGYLDQPDNCPERVTDLMRM---CWQFNPNMRPTFLEIVNLLKD 289
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 87/224 (38%), Gaps = 22/224 (9%)
Query: 332 LGKGTFGMAYKAILED------GTTVVVKRLKD-VNVGKR-DFEQQMEIVGSIRHENVVE 383
LG+G+FGM Y+ D T V VK + + ++ +R +F + ++ +VV
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGE-----GRIPLDWDTXXXXXXXXXXXXX 438
L L+V + + G + + L S R E GR P T
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP---PTLQEMIQMAAEIAD 141
Query: 439 XXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-----YRAP 493
K VH ++ + N + + D G+T A G + AP
Sbjct: 142 GMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAP 201
Query: 494 EVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLV 536
E T +SD++SFGVVL EI + + P ++++ V
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFV 245
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 86/217 (39%), Gaps = 19/217 (8%)
Query: 330 EVLGKGTFGMAYKAILE-DGTTVVVK-RLKDVNVGKRDFEQQMEIVGSIRHENVVELKAY 387
E LG G FG+ ++ G K + K ++++ + +RH +V L
Sbjct: 163 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA 222
Query: 388 YYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXK 447
+ +E +M+Y++ S G + + E + +
Sbjct: 223 FEDDNEMVMIYEFMSGGELFEKVADEHNKM-------SEDEAVEYMRQVCKGLCHMHENN 275
Query: 448 LVHGNIKSSNIFLNSQQYGCVS--DLGLTTITSALAP-----VIARAAGYRAPEVTDSRK 500
VH ++K NI +++ + D GLT + L P V A + APEV + +
Sbjct: 276 YVHLDLKPENIMFTTKRSNELKLIDFGLT---AHLDPKQSVKVTTGTAEFAAPEVAEGKP 332
Query: 501 ATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVR 537
+D++S GV+ +L+G SP DE + V+
Sbjct: 333 VGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVK 369
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 67/158 (42%), Gaps = 24/158 (15%)
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYR------APEVTDSRK 500
K +H ++ + NI L+ + D GL P R R APE +
Sbjct: 219 KCIHRDLAARNILLSENNVVKICDFGLARDIYK-NPDYVRKGDTRLPLKWMAPESIFDKI 277
Query: 501 ATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRY 559
+ SDV+S+GV+L EI + G SP D E++ + + + +R
Sbjct: 278 YSTKSDVWSYGVLLWEIFSLGGSPYPGVQMD--------------EDFCSRLREGMRMRA 323
Query: 560 PNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
P E E+ QI + C R P +RP+ ++V + ++
Sbjct: 324 P--EYSTPEIYQIMLDCWHRDPKERPRFAELVEKLGDL 359
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 111/290 (38%), Gaps = 51/290 (17%)
Query: 332 LGKGTFGMAYKAILED------GTTVVVKRLKD-VNVGKR-DFEQQMEIVGSIRHENVVE 383
LG+G+FGM Y+ D T V VK + + ++ +R +F + ++ +VV
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGE-----GRIPLDWDTXXXXXXXXXXXXX 438
L L+V + + G + + L S R E GR P T
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP---PTLQEMIQMAAEIAD 141
Query: 439 XXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTIT----------SALAPVIARAA 488
K VH N+ + N + + D G+T L PV
Sbjct: 142 GMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV----- 196
Query: 489 GYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEW 547
+ APE T +SD++SFGVVL EI + + P ++++
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF------------ 244
Query: 548 TAEVFDVELLRYP-NIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIEN 596
V D L P N E + +++++ C P+ RP ++V ++++
Sbjct: 245 ---VMDGGYLDQPDNCPERVTDLMRM---CWQFNPNMRPTFLEIVNLLKD 288
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTT---ITSALAPVIARAAGYRAPEVTDSRKATQA 504
+++ ++K N+ L+S+ + ++D G+ Y APE+ + ++
Sbjct: 463 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKS 522
Query: 505 SDVYSFGVVLLEILTGKSPIHTTGGDELVHLV 536
D ++FGV+L E+L G++P DEL +
Sbjct: 523 VDWWAFGVLLYEMLAGQAPFEGEDEDELFQSI 554
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 89/216 (41%), Gaps = 18/216 (8%)
Query: 330 EVLGKGTFGMAY--KAILEDGTTVVVKRLKDVNVGKRD--FEQQMEIVGSIRHENVVELK 385
EVLG G F + K L G +K +K + RD E ++ ++ I+HEN+V L+
Sbjct: 15 EVLGSGAFSEVFLVKQRL-TGKLFALKCIKK-SPAFRDSSLENEIAVLKKIKHENIVTLE 72
Query: 386 AYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXX 445
Y S +V S G + + ERG T
Sbjct: 73 DIYESTTHYYLVMQLVSGGELFDRI-LERGVY-------TEKDASLVIQQVLSAVKYLHE 124
Query: 446 XKLVHGNIKSSNI-FLNSQQYG--CVSDLGLTTI-TSALAPVIARAAGYRAPEVTDSRKA 501
+VH ++K N+ +L ++ ++D GL+ + + + GY APEV +
Sbjct: 125 NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQKPY 184
Query: 502 TQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVR 537
++A D +S GV+ +L G P + +L ++
Sbjct: 185 SKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIK 220
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/297 (20%), Positives = 118/297 (39%), Gaps = 65/297 (21%)
Query: 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLK---DVNVGKRDFEQQMEIVGSIRHENVVELK 385
E +G+GT+G+ YKA + G V +K+++ + +++ ++ + H N+V+L
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 386 AYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXX 445
+++++ +V+++ S+ M S +PL
Sbjct: 72 DVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPL-------IKSYLFQLLQGLAFCHS 124
Query: 446 XKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG--------------YR 491
+++H ++K N+ +N++ ++D GL ARA G YR
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGL-----------ARAFGVPVRTYXHEVVTLWYR 173
Query: 492 APEV-TDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAE 550
APE+ + + A D++S G + E++T ++ G E+ L R + R T +
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFR----IFRTLGTPD 227
Query: 551 VFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR--VIENVRPNDSENR 605
++ V MPD +P P R + V P D + R
Sbjct: 228 --------------------EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGR 264
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTT---ITSALAPVIARAAGYRAPEVTDSRKATQ 503
+++H ++K N+FLN + D GL T + Y APEV + +
Sbjct: 146 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSF 205
Query: 504 ASDVYSFGVVLLEILTGKSPIHTT 527
D++S G +L +L GK P T+
Sbjct: 206 EVDIWSLGCILYTLLVGKPPFETS 229
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 86/217 (39%), Gaps = 19/217 (8%)
Query: 330 EVLGKGTFGMAYKAILE-DGTTVVVK-RLKDVNVGKRDFEQQMEIVGSIRHENVVELKAY 387
E LG G FG+ ++ G K + K ++++ + +RH +V L
Sbjct: 57 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA 116
Query: 388 YYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXK 447
+ +E +M+Y++ S G + + E + +
Sbjct: 117 FEDDNEMVMIYEFMSGGELFEKVADEHNKM-------SEDEAVEYMRQVCKGLCHMHENN 169
Query: 448 LVHGNIKSSNIFLNSQQYGCVS--DLGLTTITSALAP-----VIARAAGYRAPEVTDSRK 500
VH ++K NI +++ + D GLT + L P V A + APEV + +
Sbjct: 170 YVHLDLKPENIMFTTKRSNELKLIDFGLT---AHLDPKQSVKVTTGTAEFAAPEVAEGKP 226
Query: 501 ATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVR 537
+D++S GV+ +L+G SP DE + V+
Sbjct: 227 VGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVK 263
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/297 (20%), Positives = 118/297 (39%), Gaps = 65/297 (21%)
Query: 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLK---DVNVGKRDFEQQMEIVGSIRHENVVELK 385
E +G+GT+G+ YKA + G V +K+++ + +++ ++ + H N+V+L
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 386 AYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXX 445
+++++ +V+++ S+ M S +PL
Sbjct: 72 DVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPL-------IKSYLFQLLQGLAFCHS 124
Query: 446 XKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG--------------YR 491
+++H ++K N+ +N++ ++D GL ARA G YR
Sbjct: 125 HRVLHRDLKPENLLINTEGAIKLADFGL-----------ARAFGVPVRTYXHEVVTLWYR 173
Query: 492 APEV-TDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAE 550
APE+ + + A D++S G + E++T ++ G E+ L R + R T +
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFR----IFRTLGTPD 227
Query: 551 VFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR--VIENVRPNDSENR 605
++ V MPD +P P R + V P D + R
Sbjct: 228 --------------------EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGR 264
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/297 (20%), Positives = 118/297 (39%), Gaps = 65/297 (21%)
Query: 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLK---DVNVGKRDFEQQMEIVGSIRHENVVELK 385
E +G+GT+G+ YKA + G V +K+++ + +++ ++ + H N+V+L
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 70
Query: 386 AYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXX 445
+++++ +V+++ S+ M S +PL
Sbjct: 71 DVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPL-------IKSYLFQLLQGLAFCHS 123
Query: 446 XKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG--------------YR 491
+++H ++K N+ +N++ ++D GL ARA G YR
Sbjct: 124 HRVLHRDLKPQNLLINTEGAIKLADFGL-----------ARAFGVPVRTYXHEVVTLWYR 172
Query: 492 APEV-TDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAE 550
APE+ + + A D++S G + E++T ++ G E+ L R + R T +
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFR----IFRTLGTPD 226
Query: 551 VFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR--VIENVRPNDSENR 605
++ V MPD +P P R + V P D + R
Sbjct: 227 --------------------EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGR 263
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
L++ ++K N+ ++ Q Y V+D G + Y APE+ S+ +A D
Sbjct: 148 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDW 207
Query: 508 YSFGVVLLEILTGKSPI 524
++ GV++ E+ G P
Sbjct: 208 WALGVLIYEMAAGYPPF 224
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/297 (20%), Positives = 118/297 (39%), Gaps = 65/297 (21%)
Query: 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLK---DVNVGKRDFEQQMEIVGSIRHENVVELK 385
E +G+GT+G+ YKA + G V +K+++ + +++ ++ + H N+V+L
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 386 AYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXX 445
+++++ +V+++ S+ M S +PL
Sbjct: 70 DVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPL-------IKSYLFQLLQGLAFCHS 122
Query: 446 XKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG--------------YR 491
+++H ++K N+ +N++ ++D GL ARA G YR
Sbjct: 123 HRVLHRDLKPENLLINTEGAIKLADFGL-----------ARAFGVPVRTYXHEVVTLWYR 171
Query: 492 APEV-TDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAE 550
APE+ + + A D++S G + E++T ++ G E+ L R + R T +
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFR----IFRTLGTPD 225
Query: 551 VFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR--VIENVRPNDSENR 605
++ V MPD +P P R + V P D + R
Sbjct: 226 --------------------EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGR 262
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 89/219 (40%), Gaps = 24/219 (10%)
Query: 330 EVLGKGTFGMAYKAILED----GTTVVVKRL--KDVNVGKRDFEQQMEIVGSIRHENVVE 383
E LG G F + +L + G VK + K + + E ++ ++ I+HEN+V
Sbjct: 28 ETLGTGAFS---EVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVA 84
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXX 443
L+ Y S + +V S G + + E+G + T
Sbjct: 85 LEDIYESPNHLYLVMQLVSGGELFDRI-VEKG-------FYTEKDASTLIRQVLDAVYYL 136
Query: 444 XXXKLVHGNIKSSNIFLNSQQYGC---VSDLGLTTITSALAPVIARAAG---YRAPEVTD 497
+VH ++K N+ SQ +SD GL+ + V++ A G Y APEV
Sbjct: 137 HRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGK-GDVMSTACGTPGYVAPEVLA 195
Query: 498 SRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLV 536
+ ++A D +S GV+ +L G P + +L +
Sbjct: 196 QKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQI 234
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 83/201 (41%), Gaps = 18/201 (8%)
Query: 330 EVLGKGTFGMAYKAILED-GTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHE------NVV 382
+V+GKG FG KA V +K +++ R +++ I+ +R + NV+
Sbjct: 103 KVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVI 162
Query: 383 ELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEG-RIPLDWDTXXXXXXXXXXXXXXXX 441
+ + ++ M ++ S+ ++ ++ + +G +PL
Sbjct: 163 HMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPL-------VRKFAHSILQCLD 214
Query: 442 XXXXXKLVHGNIKSSNIFLNSQQYGCVS--DLGLTTITSALAPVIARAAGYRAPEVTDSR 499
+++H ++K NI L Q + D G + ++ YRAPEV
Sbjct: 215 ALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYXXIQSRFYRAPEVILGA 274
Query: 500 KATQASDVYSFGVVLLEILTG 520
+ D++S G +L E+LTG
Sbjct: 275 RYGMPIDMWSLGCILAELLTG 295
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 109/285 (38%), Gaps = 41/285 (14%)
Query: 332 LGKGTFGMAYKAILED------GTTVVVKRLKD-VNVGKR-DFEQQMEIVGSIRHENVVE 383
LG+G+FGM Y+ D T V VK + + ++ +R +F + ++ +VV
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGE-----GRIPLDWDTXXXXXXXXXXXXX 438
L L+V + + G + + L S R E GR P T
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP---PTLQEMIQMAAEIAD 141
Query: 439 XXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-----YRAP 493
K VH ++ + N + + D G+T G + AP
Sbjct: 142 GMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 494 EVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVF 552
E T +SD++SFGVVL EI + + P ++++ V
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF---------------VM 246
Query: 553 DVELLRYP-NIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIEN 596
D L P N E + +++++ C P+ RP ++V ++++
Sbjct: 247 DGGYLDQPDNCPERVTDLMRM---CWQFNPNMRPTFLEIVNLLKD 288
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
L++ ++K N+ ++ Q Y V+D G + Y APE+ S+ +A D
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 508 YSFGVVLLEILTGKSPI 524
++ GV++ E+ G P
Sbjct: 223 WALGVLIYEMAAGYPPF 239
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
L++ ++K N+ ++ Q Y V+D G + Y APE+ S+ +A D
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLCGTPEYLAPEIILSKGYNKAVDW 242
Query: 508 YSFGVVLLEILTGKSPI 524
++ GV++ E+ G P
Sbjct: 243 WALGVLIYEMAAGYPPF 259
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTT---ITSALAPVIARAAGYRAPEVTDSRKATQ 503
+++H ++K N+FLN + D GL T + Y APEV + +
Sbjct: 162 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSF 221
Query: 504 ASDVYSFGVVLLEILTGKSPIHTT 527
D++S G +L +L GK P T+
Sbjct: 222 EVDIWSLGCILYTLLVGKPPFETS 245
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
L++ ++K N+ ++ Q Y V+D G + Y APE+ S+ +A D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 508 YSFGVVLLEILTGKSPI 524
++ GV++ E+ G P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 83/208 (39%), Gaps = 32/208 (15%)
Query: 332 LGKGTFGMAYKAILE-----DGTTVVVKRLKDVNVGKR--DFEQQMEIVGSIRHENVVEL 384
LG+G FG + G V VK LK + G D ++++EI+ ++ HEN+V+
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 385 KAYYYSKDEK--LMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXX 442
K ++ ++ GS+ L + + +I L
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYL--PKNKNKINL-----KQQLKYAVQICKGMDY 129
Query: 443 XXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSAL-----------APVIARAAGYR 491
+ VH ++ + N+ + S+ + D GLT +PV +
Sbjct: 130 LGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVF-----WY 184
Query: 492 APEVTDSRKATQASDVYSFGVVLLEILT 519
APE K ASDV+SFGV L E+LT
Sbjct: 185 APECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
L++ ++K N+ ++ Q Y V+D G + Y APE+ S+ +A D
Sbjct: 155 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 214
Query: 508 YSFGVVLLEILTGKSPI 524
++ GV++ E+ G P
Sbjct: 215 WALGVLIYEMAAGYPPF 231
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
L++ ++K N+ ++ Q Y V+D G + Y APE+ S+ +A D
Sbjct: 155 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 214
Query: 508 YSFGVVLLEILTGKSPI 524
++ GV++ E+ G P
Sbjct: 215 WALGVLIYEMAAGYPPF 231
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
L++ ++K N+ ++ Q Y V+D G + Y APE+ S+ +A D
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 508 YSFGVVLLEILTGKSPI 524
++ GV++ E+ G P
Sbjct: 223 WALGVLIYEMAAGYPPF 239
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
L++ ++K N+ ++ Q Y V+D G + Y APE+ S+ +A D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 508 YSFGVVLLEILTGKSPI 524
++ GV++ E+ G P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 84/210 (40%), Gaps = 16/210 (7%)
Query: 320 DLEDLLRASAEVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHE 379
D E+L E +GKG+FG +K I VV ++ D+ + + E + + +
Sbjct: 20 DPEELF-TKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQC 78
Query: 380 NVVELKAYY--YSKDEKL-MVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXX 436
+ + YY Y K KL ++ +Y GS +L + P D
Sbjct: 79 DSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAG------PFD---EFQIATMLKEI 129
Query: 437 XXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLT---TITSALAPVIARAAGYRAP 493
K +H +IK++N+ L+ Q ++D G+ T T + AP
Sbjct: 130 LKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAP 189
Query: 494 EVTDSRKATQASDVYSFGVVLLEILTGKSP 523
EV +D++S G+ +E+ G+ P
Sbjct: 190 EVIQQSAYDSKADIWSLGITAIELAKGEPP 219
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
L++ ++K N+ ++ Q Y V+D G + Y APE+ S+ +A D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 508 YSFGVVLLEILTGKSPI 524
++ GV++ E+ G P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
L++ ++K N+ ++ Q Y V+D G + Y APE+ S+ +A D
Sbjct: 157 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 216
Query: 508 YSFGVVLLEILTGKSPI 524
++ GV++ E+ G P
Sbjct: 217 WALGVLIYEMAAGYPPF 233
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 86/224 (38%), Gaps = 22/224 (9%)
Query: 332 LGKGTFGMAYKAILED------GTTVVVKRLKD-VNVGKR-DFEQQMEIVGSIRHENVVE 383
LG+G+FGM Y+ D T V VK + + ++ +R +F + ++ +VV
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGE-----GRIPLDWDTXXXXXXXXXXXXX 438
L L+V + + G + + L S R E GR P T
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP---PTLQEMIQMAAEIAD 141
Query: 439 XXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-----YRAP 493
K VH ++ + N + + D G+T G + AP
Sbjct: 142 GMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 494 EVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLV 536
E T +SD++SFGVVL EI + + P ++++ V
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFV 245
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
L++ ++K N+ ++ Q Y V+D G + Y APE+ S+ +A D
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 508 YSFGVVLLEILTGKSPI 524
++ GV++ E+ G P
Sbjct: 223 WALGVLIYEMAAGYPPF 239
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
L++ ++K N+ ++ Q Y V+D G + Y APE+ S+ +A D
Sbjct: 149 LIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 208
Query: 508 YSFGVVLLEILTGKSPI 524
++ GV++ E+ G P
Sbjct: 209 WALGVLIYEMAAGYPPF 225
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
L++ ++K N+ ++ Q Y V+D G + Y APE+ S+ +A D
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 508 YSFGVVLLEILTGKSPI 524
++ GV++ E+ G P
Sbjct: 223 WALGVLIYEMAAGYPPF 239
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
L++ ++K N+ ++ Q Y V+D G + Y APE+ S+ +A D
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 508 YSFGVVLLEILTGKSPI 524
++ GV++ E+ G P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 85/200 (42%), Gaps = 16/200 (8%)
Query: 330 EVLGKGTFGMAYKAI-LEDGTTVVVKRLKDVNVGKRDFE-QQMEIVGSIRHENVVELKAY 387
E +G+G G Y A+ + G V ++++ K++ ++ ++ ++ N+V
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 388 YYSKDEKLMVYDYYSLGSVSAML-HSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXX 446
Y DE +V +Y + GS++ ++ + EG+I
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI----------AAVCRECLQALEFLHSN 136
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG---YRAPEVTDSRKATQ 503
+++H NIKS NI L ++D G + + G + APEV +
Sbjct: 137 QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGP 196
Query: 504 ASDVYSFGVVLLEILTGKSP 523
D++S G++ +E++ G+ P
Sbjct: 197 KVDIWSLGIMAIEMIEGEPP 216
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
L++ ++K N+ ++ Q Y V+D G + Y APE+ S+ +A D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 508 YSFGVVLLEILTGKSPI 524
++ GV++ E+ G P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
L++ ++K N+ ++ Q Y V+D G + Y APE+ S+ +A D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 508 YSFGVVLLEILTGKSPI 524
++ GV++ E+ G P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
L++ ++K N+ ++ Q Y V+D G + Y APE+ S+ +A D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 508 YSFGVVLLEILTGKSPI 524
++ GV++ E+ G P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 83/208 (39%), Gaps = 32/208 (15%)
Query: 332 LGKGTFGMAYKAILE-----DGTTVVVKRLKDVNVGKR--DFEQQMEIVGSIRHENVVEL 384
LG+G FG + G V VK LK + G D ++++EI+ ++ HEN+V+
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 385 KAYYYSKDEK--LMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXX 442
K ++ ++ GS+ L + + +I L
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYL--PKNKNKINL-----KQQLKYAVQICKGMDY 141
Query: 443 XXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSAL-----------APVIARAAGYR 491
+ VH ++ + N+ + S+ + D GLT +PV +
Sbjct: 142 LGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVF-----WY 196
Query: 492 APEVTDSRKATQASDVYSFGVVLLEILT 519
APE K ASDV+SFGV L E+LT
Sbjct: 197 APECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 90/207 (43%), Gaps = 23/207 (11%)
Query: 332 LGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKR--DFEQQMEIVGSIRHENVVELKAYYY 389
LG G FG YKA ++ + ++ + + D+ ++EI+ + H +V+L YY
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 390 SKDEKLMVYDYYSLGSVSA-MLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKL 448
+ ++ ++ G+V A ML +RG T ++
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGL--------TEPQIQVVCRQMLEALNFLHSKRI 130
Query: 449 VHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA-----GYRAPEVT--DSRKA 501
+H ++K+ N+ + + ++D G++ L + R + + APEV ++ K
Sbjct: 131 IHRDLKAGNVLMTLEGDIRLADFGVS--AKNLKTLQKRDSFIGTPYWMAPEVVMCETMKD 188
Query: 502 T---QASDVYSFGVVLLEILTGKSPIH 525
T +D++S G+ L+E+ + P H
Sbjct: 189 TPYDYKADIWSLGITLIEMAQIEPPHH 215
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
L++ ++K N+ ++ Q Y V+D G + Y APE+ S+ +A D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 508 YSFGVVLLEILTGKSPI 524
++ GV++ E+ G P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
L++ ++K N+ ++ Q Y V+D G + Y APE+ S+ +A D
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 508 YSFGVVLLEILTGKSPI 524
++ GV++ E+ G P
Sbjct: 223 WALGVLIYEMAAGYPPF 239
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
L++ ++K N+ ++ Q Y V+D G + Y APE+ S+ +A D
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 508 YSFGVVLLEILTGKSPI 524
++ GV++ E+ G P
Sbjct: 223 WALGVLIYEMAAGYPPF 239
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
L++ ++K N+ ++ Q Y V+D G + Y APE+ S+ +A D
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 242
Query: 508 YSFGVVLLEILTGKSPI 524
++ GV++ E+ G P
Sbjct: 243 WALGVLIYEMAAGYPPF 259
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
L++ ++K N+ ++ Q Y V+D G + Y APE+ S+ +A D
Sbjct: 162 LIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 508 YSFGVVLLEILTGKSPI 524
++ GV++ E+ G P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
L++ ++K N+ ++ Q Y V+D G + Y APE+ S+ +A D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 508 YSFGVVLLEILTGKSPI 524
++ GV++ E+ G P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
L++ ++K N+ ++ Q Y V+D G + Y APE+ S+ +A D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 508 YSFGVVLLEILTGKSPI 524
++ GV++ E+ G P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
L++ ++K N+ ++ Q Y V+D G + Y APE+ S+ +A D
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 508 YSFGVVLLEILTGKSPI 524
++ GV++ E+ G P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
L++ ++K N+ ++ Q Y V+D G + Y APE+ S+ +A D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 508 YSFGVVLLEILTGKSPI 524
++ GV++ E+ G P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
L++ ++K N+ ++ Q Y V+D G + Y APE+ S+ +A D
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 508 YSFGVVLLEILTGKSPI 524
++ GV++ E+ G P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
L++ ++K N+ ++ Q Y V+D G + Y APE+ S+ +A D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 508 YSFGVVLLEILTGKSPI 524
++ GV++ E+ G P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
L++ ++K N+ ++ Q Y V+D G + Y APE+ S+ +A D
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 508 YSFGVVLLEILTGKSPI 524
++ GV++ E+ G P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
L++ ++K N+ ++ Q Y V+D G + Y APE+ S+ +A D
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 508 YSFGVVLLEILTGKSPI 524
++ GV++ E+ G P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 86/224 (38%), Gaps = 22/224 (9%)
Query: 332 LGKGTFGMAYKAILED------GTTVVVKRLKD-VNVGKR-DFEQQMEIVGSIRHENVVE 383
LG+G+FGM Y+ D T V VK + + ++ +R +F + ++ +VV
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGE-----GRIPLDWDTXXXXXXXXXXXXX 438
L L+V + + G + + L S R E GR P T
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP---PTLQEMIQMAAEIAD 138
Query: 439 XXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-----YRAP 493
K VH ++ + N + + D G+T G + AP
Sbjct: 139 GMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 198
Query: 494 EVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLV 536
E T +SD++SFGVVL EI + + P ++++ V
Sbjct: 199 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFV 242
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
L++ ++K N+ ++ Q Y V+D G + Y APE+ S+ +A D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 508 YSFGVVLLEILTGKSPI 524
++ GV++ E+ G P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
L++ ++K N+ ++ Q Y V+D G + Y APE+ S+ +A D
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 508 YSFGVVLLEILTGKSPI 524
++ GV++ E+ G P
Sbjct: 223 WALGVLIYEMAAGYPPF 239
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
L++ ++K N+ ++ Q Y V+D G + Y APE+ S+ +A D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 508 YSFGVVLLEILTGKSPI 524
++ GV++ E+ G P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
L++ ++K N+ ++ Q Y V+D G + Y APE+ S+ +A D
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 508 YSFGVVLLEILTGKSPI 524
++ GV++ E+ G P
Sbjct: 223 WALGVLIYEMAAGYPPF 239
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
L++ ++K N+ ++ Q Y V+D G + Y APE+ S+ +A D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 508 YSFGVVLLEILTGKSPI 524
++ GV++ E+ G P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
L++ ++K N+ ++ Q Y V+D G + Y APE+ S+ +A D
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 508 YSFGVVLLEILTGKSPI 524
++ GV++ E+ G P
Sbjct: 223 WALGVLIYEMAAGYPPF 239
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
L++ ++K N+ ++ Q Y V+D G + Y APE+ S+ +A D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 508 YSFGVVLLEILTGKSPI 524
++ GV++ E+ G P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
L++ ++K N+ ++ Q Y V+D G + Y APE+ S+ +A D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 508 YSFGVVLLEILTGKSPI 524
++ GV++ E+ G P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
L++ ++K N+ ++ Q Y V+D G + Y APE+ S+ +A D
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 508 YSFGVVLLEILTGKSPI 524
++ GV++ E+ G P
Sbjct: 223 WALGVLIYEMAAGYPPF 239
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
L++ ++K N+ ++ Q Y V+D G + Y APE+ S+ +A D
Sbjct: 163 LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 508 YSFGVVLLEILTGKSPI 524
++ GV++ E+ G P
Sbjct: 223 WALGVLIYEMAAGYPPF 239
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
L++ ++K N+ ++ Q Y V+D G + Y APE+ S+ +A D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 508 YSFGVVLLEILTGKSPI 524
++ GV++ E+ G P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 111/279 (39%), Gaps = 28/279 (10%)
Query: 330 EVLGKGTFGM---AYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKA 386
EV+G G + AY A ++ + L+ + ++++ + H N+V
Sbjct: 16 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYT 75
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLHS--ERGEGRIP-LDWDTXXXXXXXXXXXXXXXXXX 443
+ KDE +V S GSV ++ +GE + LD T
Sbjct: 76 SFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN 135
Query: 444 XXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSA--------LAPVIARAAGYRAPEV 495
+H ++K+ NI L ++D G++ + + + APEV
Sbjct: 136 GQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEV 192
Query: 496 TDS-RKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDV 554
+ R +D++SFG+ +E+ TG +P H +++ L E V D
Sbjct: 193 MEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLE---TGVQDK 249
Query: 555 ELL-RYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592
E+L +Y +M+ + C+ + P++RP +++R
Sbjct: 250 EMLKKYGKSFRKMISL------CLQKDPEKRPTAAELLR 282
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
L++ ++K N+ ++ Q Y V+D G + Y APE+ S+ +A D
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 222
Query: 508 YSFGVVLLEILTGKSPI 524
++ GV++ E+ G P
Sbjct: 223 WALGVLIYEMAAGYPPF 239
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
L++ ++K N+ ++ Q Y V+D G + Y APE+ S+ +A D
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 242
Query: 508 YSFGVVLLEILTGKSPI 524
++ GV++ E+ G P
Sbjct: 243 WALGVLIYEMAAGYPPF 259
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
L++ ++K N+ ++ Q Y V+D G + Y APE+ S+ +A D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLXGTPEYLAPEIILSKGYNKAVDW 221
Query: 508 YSFGVVLLEILTGKSPI 524
++ GV++ E+ G P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
L++ ++K N+ ++ Q Y V+D G + Y APE+ S+ +A D
Sbjct: 162 LIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIISKGYNKAVDW 221
Query: 508 YSFGVVLLEILTGKSPI 524
++ GV++ E+ G P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
L++ ++K N+ ++ Q Y V+D G + Y APE+ S+ +A D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 508 YSFGVVLLEILTGKSPI 524
++ GV++ E+ G P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 90/207 (43%), Gaps = 23/207 (11%)
Query: 332 LGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKR--DFEQQMEIVGSIRHENVVELKAYYY 389
LG G FG YKA ++ + ++ + + D+ ++EI+ + H +V+L YY
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 390 SKDEKLMVYDYYSLGSVSA-MLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKL 448
+ ++ ++ G+V A ML +RG T ++
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRGL--------TEPQIQVVCRQMLEALNFLHSKRI 138
Query: 449 VHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA-----GYRAPEVT--DSRKA 501
+H ++K+ N+ + + ++D G++ L + R + + APEV ++ K
Sbjct: 139 IHRDLKAGNVLMTLEGDIRLADFGVS--AKNLKTLQKRDSFIGTPYWMAPEVVMCETMKD 196
Query: 502 T---QASDVYSFGVVLLEILTGKSPIH 525
T +D++S G+ L+E+ + P H
Sbjct: 197 TPYDYKADIWSLGITLIEMAQIEPPHH 223
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 85/212 (40%), Gaps = 32/212 (15%)
Query: 330 EVLGKGTFGMAYKAILEDGTT---VVVKRL-KDVNVGKR-DFEQQMEIVGSIRHENVVEL 384
+VLG G F A ED T V +K + K+ GK E ++ ++ I+H N+V L
Sbjct: 24 DVLGTGAFSEVILA--EDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVAL 81
Query: 385 KAYYYSKDEKLMVYDYYSLGS-----VSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXX 439
Y S ++ S G V ++ER R+
Sbjct: 82 DDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIF-------------QVLDA 128
Query: 440 XXXXXXXKLVHGNIKSSNIF---LNSQQYGCVSDLGLTTITSALAPVIARAA---GYRAP 493
+VH ++K N+ L+ +SD GL+ + V++ A GY AP
Sbjct: 129 VKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP-GSVLSTACGTPGYVAP 187
Query: 494 EVTDSRKATQASDVYSFGVVLLEILTGKSPIH 525
EV + ++A D +S GV+ +L G P +
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFY 219
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 111/279 (39%), Gaps = 28/279 (10%)
Query: 330 EVLGKGTFGM---AYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKA 386
EV+G G + AY A ++ + L+ + ++++ + H N+V
Sbjct: 21 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYT 80
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLHS--ERGEGRIP-LDWDTXXXXXXXXXXXXXXXXXX 443
+ KDE +V S GSV ++ +GE + LD T
Sbjct: 81 SFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN 140
Query: 444 XXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSA--------LAPVIARAAGYRAPEV 495
+H ++K+ NI L ++D G++ + + + APEV
Sbjct: 141 GQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEV 197
Query: 496 TDS-RKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDV 554
+ R +D++SFG+ +E+ TG +P H +++ L E V D
Sbjct: 198 MEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLE---TGVQDK 254
Query: 555 ELL-RYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592
E+L +Y +M+ + C+ + P++RP +++R
Sbjct: 255 EMLKKYGKSFRKMISL------CLQKDPEKRPTAAELLR 287
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 82/203 (40%), Gaps = 17/203 (8%)
Query: 330 EVLGKGTFG---MAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKA 386
+ LG+G G +A + E+ V + +K + ++++ I + HENVV+
Sbjct: 12 QTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXX 446
+ + + + +Y S G + + + G +P
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIG---MP-----EPDAQRFFHQLMAGVVYLHGI 123
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTI-----TSALAPVIARAAGYRAPEVTDSRK- 500
+ H +IK N+ L+ + +SD GL T+ L + Y APE+ R+
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 501 ATQASDVYSFGVVLLEILTGKSP 523
+ DV+S G+VL +L G+ P
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 3/93 (3%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTI---TSALAPVIARAAGYRAPEVTDSRKATQA 504
++H ++K +N+FL+ +Q + D GL I ++ A Y +PE + +
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEK 196
Query: 505 SDVYSFGVVLLEILTGKSPIHTTGGDELVHLVR 537
SD++S G +L E+ P EL +R
Sbjct: 197 SDIWSLGCLLYELCALMPPFTAFSQKELAGKIR 229
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 95/230 (41%), Gaps = 39/230 (16%)
Query: 321 LEDLLRASAEVLGKGTFGMAYKAI-LEDGTTVVVKRLKDV--NVGKRDFEQQMEIVGSIR 377
ED+ + ++E+LG+G + A+ L++G VK ++ + R F + +
Sbjct: 10 FEDMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQG 69
Query: 378 HENVVELKAYYYSKDEKLMVYDYYSLGSVSAMLH-----SERGEGRIPLDWDTXXXXXXX 432
++N++EL ++ +V++ GS+ A + +ER R+ D
Sbjct: 70 NKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRD---------- 119
Query: 433 XXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYG-----CVSDLG--------LTTITSA 479
+ H ++K NI S + C DLG T IT+
Sbjct: 120 ---VAAALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTP 176
Query: 480 LAPVIARAAGYRAPEVTD--SRKAT---QASDVYSFGVVLLEILTGKSPI 524
+A Y APEV + + +AT + D++S GVVL +L+G P
Sbjct: 177 ELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPF 226
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 3/93 (3%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTI---TSALAPVIARAAGYRAPEVTDSRKATQA 504
++H ++K +N+FL+ +Q + D GL I ++ A Y +PE + +
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEK 196
Query: 505 SDVYSFGVVLLEILTGKSPIHTTGGDELVHLVR 537
SD++S G +L E+ P EL +R
Sbjct: 197 SDIWSLGCLLYELCALMPPFTAFSQKELAGKIR 229
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 114/289 (39%), Gaps = 53/289 (18%)
Query: 332 LGKGTFGMAYKAILEDGTTVVVKRLKDVN-----VGKRDFEQQMEIVGSIRHENVVELKA 386
LG G FG + ++E+ ++ + + +K +N V E ++E++ S+ H N++++
Sbjct: 30 LGSGAFGDVH--LVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFE 87
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXX 446
+ +V + G + + S + G+ +
Sbjct: 88 VFEDYHNMYIVMETCEGGELLERIVSAQARGKAL----SEGYVAELMKQMMNALAYFHSQ 143
Query: 447 KLVHGNIKSSNI-FLNSQQYGCVS--DLGLTTI--TSALAPVIARAAGYRAPEVTDSRKA 501
+VH ++K NI F ++ + + D GL + + + A A Y APEV R
Sbjct: 144 HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVF-KRDV 202
Query: 502 TQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPN 561
T D++S GVV+ +LTG P T +E V+++ T + PN
Sbjct: 203 TFKCDIWSAGVVMYFLLTGCLPFTGTSLEE-----------VQQKAT--------YKEPN 243
Query: 562 IEEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENVRPNDSENRPSSGN 610
A+ C RP P V +++ + D E RPS+
Sbjct: 244 ----------YAVEC-------RPLTPQAVDLLKQMLTKDPERRPSAAQ 275
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 86/212 (40%), Gaps = 35/212 (16%)
Query: 331 VLGKGTFGMAYKAIL--------EDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVV 382
VLGKG+FG + IL E V+ KR K ++++++ + H N++
Sbjct: 39 VLGKGSFG---EVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIM 95
Query: 383 ELKAYYYSKDEKLMVYDYYSLGS-----VSAMLHSERGEGRIPLDWDTXXXXXXXXXXXX 437
+L ++ K +V + Y+ G +S SE RI
Sbjct: 96 KLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARI-------------IRQVL 142
Query: 438 XXXXXXXXXKLVHGNIKSSNIFLNSQQYGC---VSDLGLTTITSALAPVIAR--AAGYRA 492
K+VH ++K N+ L S+ + D GL+T A + + A Y A
Sbjct: 143 SGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIA 202
Query: 493 PEVTDSRKATQASDVYSFGVVLLEILTGKSPI 524
PEV + DV+S GV+L +L+G P
Sbjct: 203 PEVLHG-TYDEKCDVWSTGVILYILLSGCPPF 233
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 94/226 (41%), Gaps = 28/226 (12%)
Query: 330 EVLGKGTFGMA-----YKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVEL 384
E LG+G+FG YK + + ++L + E+++ + +RH ++++L
Sbjct: 15 ETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKL 74
Query: 385 KAYYYSKDEKLMVYDYYSLGSVSAMLHSER---GEGRIPLDWDTXXXXXXXXXXXXXXXX 441
+ + +MV +Y ++ +R EGR
Sbjct: 75 YDVITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGR------------RFFQQIICAIE 122
Query: 442 XXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSA--LAPVIARAAGYRAPEVTDSR 499
K+VH ++K N+ L+ ++D GL+ I + + Y APEV + +
Sbjct: 123 YCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGK 182
Query: 500 -KATQASDVYSFGVVLLEILTGKSPIHTTGGDELV-HLVRWVHSVV 543
A DV+S G+VL +L G+ P DE + +L + V+S V
Sbjct: 183 LYAGPEVDVWSCGIVLYVMLVGRLPF----DDEFIPNLFKKVNSCV 224
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 81/205 (39%), Gaps = 18/205 (8%)
Query: 329 AEVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNVGKRD----FEQQMEIVGSIRHENVVE 383
+ LG GTFG E G V VK L + D ++++ + RH ++++
Sbjct: 21 GDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIK 80
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXX 443
L + + MV +Y S G + + GR+
Sbjct: 81 LYQVISTPSDIFMVMEYVSGGELFDYICKN---GRL-----DEKESRRLFQQILSGVDYC 132
Query: 444 XXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG---YRAPEVTDSR- 499
+VH ++K N+ L++ ++D GL+ + S + + G Y APEV R
Sbjct: 133 HRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD-GEFLRXSCGSPNYAAPEVISGRL 191
Query: 500 KATQASDVYSFGVVLLEILTGKSPI 524
A D++S GV+L +L G P
Sbjct: 192 YAGPEVDIWSSGVILYALLCGTLPF 216
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 87/218 (39%), Gaps = 32/218 (14%)
Query: 323 DLLRASAEVLGKGTFGMAYKAILEDGTTV-------VVKRLKDVNVGKRDFEQQME--IV 373
+LLR VLGKG +G ++ G V+K+ V K + E I+
Sbjct: 20 ELLR----VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNIL 75
Query: 374 GSIRHENVVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXX 433
++H +V+L + + + ++ +Y S G + L ER EG D
Sbjct: 76 EEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQL--ER-EGIFMED-----TACFYL 127
Query: 434 XXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLT-------TITSALAPVIAR 486
+++ ++K NI LN Q + ++D GL T+T I
Sbjct: 128 AEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIE- 186
Query: 487 AAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPI 524
Y APE+ +A D +S G ++ ++LTG P
Sbjct: 187 ---YMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPF 221
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 10/84 (11%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLT--------TITSALAPVIARAAGYRAPEVTDSR 499
++H ++K +NI +++ V D G+ ++T A + A Y +PE
Sbjct: 154 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAA--VIGTAQYLSPEQARGD 211
Query: 500 KATQASDVYSFGVVLLEILTGKSP 523
SDVYS G VL E+LTG+ P
Sbjct: 212 SVDARSDVYSLGCVLYEVLTGEPP 235
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 85/212 (40%), Gaps = 32/212 (15%)
Query: 330 EVLGKGTFGMAYKAILEDGTT---VVVKRL-KDVNVGKR-DFEQQMEIVGSIRHENVVEL 384
+VLG G F A ED T V +K + K+ GK E ++ ++ I+H N+V L
Sbjct: 24 DVLGTGAFSEVILA--EDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVAL 81
Query: 385 KAYYYSKDEKLMVYDYYSLGS-----VSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXX 439
Y S ++ S G V ++ER R+
Sbjct: 82 DDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIF-------------QVLDA 128
Query: 440 XXXXXXXKLVHGNIKSSNIF---LNSQQYGCVSDLGLTTITSALAPVIARAA---GYRAP 493
+VH ++K N+ L+ +SD GL+ + V++ A GY AP
Sbjct: 129 VKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP-GSVLSTACGTPGYVAP 187
Query: 494 EVTDSRKATQASDVYSFGVVLLEILTGKSPIH 525
EV + ++A D +S GV+ +L G P +
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFY 219
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 10/84 (11%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLT--------TITSALAPVIARAAGYRAPEVTDSR 499
++H ++K +NI +++ V D G+ ++T A + A Y +PE
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAA--VIGTAQYLSPEQARGD 194
Query: 500 KATQASDVYSFGVVLLEILTGKSP 523
SDVYS G VL E+LTG+ P
Sbjct: 195 SVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 87/218 (39%), Gaps = 32/218 (14%)
Query: 323 DLLRASAEVLGKGTFGMAYKAILEDGTTV-------VVKRLKDVNVGKRDFEQQME--IV 373
+LLR VLGKG +G ++ G V+K+ V K + E I+
Sbjct: 20 ELLR----VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNIL 75
Query: 374 GSIRHENVVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXX 433
++H +V+L + + + ++ +Y S G + L ER EG D
Sbjct: 76 EEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQL--ER-EGIFMED-----TACFYL 127
Query: 434 XXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLT-------TITSALAPVIAR 486
+++ ++K NI LN Q + ++D GL T+T I
Sbjct: 128 AEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIE- 186
Query: 487 AAGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPI 524
Y APE+ +A D +S G ++ ++LTG P
Sbjct: 187 ---YMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPF 221
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 10/84 (11%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLT--------TITSALAPVIARAAGYRAPEVTDSR 499
++H ++K +NI +++ V D G+ ++T A + A Y +PE
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAA--VIGTAQYLSPEQARGD 194
Query: 500 KATQASDVYSFGVVLLEILTGKSP 523
SDVYS G VL E+LTG+ P
Sbjct: 195 SVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 10/84 (11%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLT--------TITSALAPVIARAAGYRAPEVTDSR 499
++H ++K +NI +++ V D G+ ++T A + A Y +PE
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAA--VIGTAQYLSPEQARGD 194
Query: 500 KATQASDVYSFGVVLLEILTGKSP 523
SDVYS G VL E+LTG+ P
Sbjct: 195 SVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 10/84 (11%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLT--------TITSALAPVIARAAGYRAPEVTDSR 499
++H ++K +NI +++ V D G+ ++T A + A Y +PE
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAA--VIGTAQYLSPEQARGD 194
Query: 500 KATQASDVYSFGVVLLEILTGKSP 523
SDVYS G VL E+LTG+ P
Sbjct: 195 SVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 129/326 (39%), Gaps = 80/326 (24%)
Query: 330 EVLGKGTFGMAYKA-ILEDGTTVVVKRLKDVNVGKRDFEQQMEIVG--SIRHENVVEL-- 384
EV +G FG +KA +L + V + ++D K+ ++ + E+ ++HEN+++
Sbjct: 30 EVKARGRFGCVWKAQLLNEYVAVKIFPIQD----KQSWQNEYEVYSLPGMKHENILQFIG 85
Query: 385 -KAYYYSKDEKL-MVYDYYSLGSVSAMLHSERGEGRIPLDW-------DTXXXXXXXXXX 435
+ S D L ++ ++ GS+S L + + W +T
Sbjct: 86 AEKRGTSVDVDLWLITAFHEKGSLSDFLKAN------VVSWNELCHIAETMARGLAYLHE 139
Query: 436 XXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG------ 489
+ H +IKS N+ L + C++D GL AL ++AG
Sbjct: 140 DIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGL-----ALKFEAGKSAGDTHGQV 194
Query: 490 ----YRAPEVTD-----SRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVH 540
Y APEV + R A D+Y+ G+VL E+ + T D V
Sbjct: 195 GTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELAS-----RCTAADGPV------- 242
Query: 541 SVVREEWTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPD----------V 590
+E+ F+ E+ ++P++E+ M VV +RP + D +
Sbjct: 243 ----DEYMLP-FEEEIGQHPSLED---------MQEVVVHKKKRPVLRDYWQKHAGMAML 288
Query: 591 VRVIENVRPNDSENRPSSGNKSESST 616
IE +D+E R S+G E T
Sbjct: 289 CETIEECWDHDAEARLSAGCVGERIT 314
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 85/212 (40%), Gaps = 32/212 (15%)
Query: 330 EVLGKGTFGMAYKAILEDGTT---VVVKRL-KDVNVGKR-DFEQQMEIVGSIRHENVVEL 384
+VLG G F A ED T V +K + K+ GK E ++ ++ I+H N+V L
Sbjct: 24 DVLGTGAFSEVILA--EDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVAL 81
Query: 385 KAYYYSKDEKLMVYDYYSLGS-----VSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXX 439
Y S ++ S G V ++ER R+
Sbjct: 82 DDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIF-------------QVLDA 128
Query: 440 XXXXXXXKLVHGNIKSSNIF---LNSQQYGCVSDLGLTTITSALAPVIARAA---GYRAP 493
+VH ++K N+ L+ +SD GL+ + V++ A GY AP
Sbjct: 129 VKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP-GSVLSTACGTPGYVAP 187
Query: 494 EVTDSRKATQASDVYSFGVVLLEILTGKSPIH 525
EV + ++A D +S GV+ +L G P +
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFY 219
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 53/107 (49%), Gaps = 10/107 (9%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIAR----AAGYRAPEVTDSRKATQ 503
+++ ++K N+ L+S+ + ++D G+ + V R Y APE+ + +
Sbjct: 141 IIYRDLKLDNVMLDSEGHIKIADFGMCK-EHMMDGVTTREFCGTPDYIAPEIIAYQPYGK 199
Query: 504 ASDVYSFGVVLLEILTGKSPIHTTGGDELV-----HLVRWVHSVVRE 545
+ D +++GV+L E+L G+ P DEL H V + S+ +E
Sbjct: 200 SVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKE 246
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 87/213 (40%), Gaps = 35/213 (16%)
Query: 331 VLGKGTFGMAYKAIL--------EDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVV 382
VLGKG+FG + IL E V+ KR K ++++++ + H N++
Sbjct: 33 VLGKGSFG---EVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIM 89
Query: 383 ELKAYYYSKDEKLMVYDYYSLGS-----VSAMLHSERGEGRIPLDWDTXXXXXXXXXXXX 437
+L ++ K +V + Y+ G +S SE RI
Sbjct: 90 KLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARI-------------IRQVL 136
Query: 438 XXXXXXXXXKLVHGNIKSSNIFLNSQQYGC---VSDLGLTTITSALAPVIAR--AAGYRA 492
K+VH ++K N+ L S+ + D GL+T A + + A Y A
Sbjct: 137 SGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIA 196
Query: 493 PEVTDSRKATQASDVYSFGVVLLEILTGKSPIH 525
PEV + DV+S GV+L +L+G P +
Sbjct: 197 PEVLHG-TYDEKCDVWSTGVILYILLSGCPPFN 228
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 84/204 (41%), Gaps = 30/204 (14%)
Query: 332 LGKGTFGMAYKAILED-GTTVVVKRL---KDVNVGKRDFEQQMEIVGSIRHENVVELKAY 387
+G+G++G+ +K D G V +K+ +D V K+ +++ ++ ++H N+V L
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 388 YYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIP------LDWDTXXXXXXXXXXXXXXXX 441
+ K +V++Y + + +RG +P + W T
Sbjct: 71 FRRKRRLHLVFEYCDHTVLHELDRYQRG---VPEHLVKSITWQT-----------LQAVN 116
Query: 442 XXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG---YRAPE--VT 496
+H ++K NI + + D G + + + YR+PE V
Sbjct: 117 FCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVG 176
Query: 497 DSRKATQASDVYSFGVVLLEILTG 520
D++ DV++ G V E+L+G
Sbjct: 177 DTQYGPPV-DVWAIGCVFAELLSG 199
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 84/214 (39%), Gaps = 19/214 (8%)
Query: 331 VLGKGTFGMAYKAIL----EDGTTVVVKRLKDVNVG--KRDFEQQMEIVGSIRHENVVEL 384
+G+G FG ++ I V +K K+ + F Q+ + H ++V+L
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 385 KAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXX 444
+++ ++ + +LG + + L + LD
Sbjct: 77 IGVI-TENPVWIIMELCTLGELRSFLQVRK----FSLD---LASLILYAYQLSTALAYLE 128
Query: 445 XXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTI----TSALAPVIARAAGYRAPEVTDSRK 500
+ VH +I + N+ ++S + D GL+ T A + APE + R+
Sbjct: 129 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRR 188
Query: 501 ATQASDVYSFGVVLLEILT-GKSPIHTTGGDELV 533
T ASDV+ FGV + EIL G P ++++
Sbjct: 189 FTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 222
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 8/83 (9%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITS-------ALAPVIARAAGYRAPEVTDSRK 500
++H ++K +NI +++ V D G+ + A VI A Y +PE
Sbjct: 137 IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIG-TAQYLSPEQARGDS 195
Query: 501 ATQASDVYSFGVVLLEILTGKSP 523
SDVYS G VL E+LTG+ P
Sbjct: 196 VDARSDVYSLGCVLYEVLTGEPP 218
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 85/200 (42%), Gaps = 16/200 (8%)
Query: 330 EVLGKGTFGMAYKAI-LEDGTTVVVKRLKDVNVGKRDFE-QQMEIVGSIRHENVVELKAY 387
E +G+G G Y A+ + G V ++++ K++ ++ ++ ++ N+V
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 388 YYSKDEKLMVYDYYSLGSVSAML-HSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXX 446
Y DE +V +Y + GS++ ++ + EG+I
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI----------AAVCRECLQALEFLHSN 135
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG---YRAPEVTDSRKATQ 503
+++H +IKS NI L ++D G + + G + APEV +
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGP 195
Query: 504 ASDVYSFGVVLLEILTGKSP 523
D++S G++ +E++ G+ P
Sbjct: 196 KVDIWSLGIMAIEMIEGEPP 215
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITS---ALAPVIARAAGYRAPEVTDSRKATQA 504
+VH ++K NI + S ++D GL I S ALAPV+ YRAPEV
Sbjct: 133 IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVV-TLWYRAPEVLLQSTYATP 191
Query: 505 SDVYSFGVVLLEILTGK 521
D++S G + E+ K
Sbjct: 192 VDMWSVGCIFAEMFRRK 208
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 88/229 (38%), Gaps = 32/229 (13%)
Query: 332 LGKGTFGMAYKAILED------GTTVVVKRLKD-VNVGKR-DFEQQMEIVGSIRHENVVE 383
LG+G+FGM Y+ D T V VK + + ++ +R +F + ++ +VV
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGE-----GRIPLDWDTXXXXXXXXXXXXX 438
L L+V + + G + + L S R E GR P T
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP---PTLQEMIQMAAEIAD 141
Query: 439 XXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTIT----------SALAPVIARAA 488
K VH ++ + N + + D G+T L PV
Sbjct: 142 GMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV----- 196
Query: 489 GYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLV 536
+ APE T +SD++SFGVVL EI + + P ++++ V
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFV 245
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 37/77 (48%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
L++ ++K N+ ++ Q Y V+D G + Y APE+ S+ +A D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 221
Query: 508 YSFGVVLLEILTGKSPI 524
++ GV++ ++ G P
Sbjct: 222 WALGVLIYQMAAGYPPF 238
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D GL T YRAPE+ ++ Q D
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNAMHYNQTVD 205
Query: 507 VYSFGVVLLEILTGKSPIHTTGG-DELVHLVRWV 539
++S G ++ E+LTG++ T D+L ++R V
Sbjct: 206 IWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 239
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 81/210 (38%), Gaps = 29/210 (13%)
Query: 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAY-- 387
E +GKG +G ++ + G V VK + E ++ +RHEN++ A
Sbjct: 43 ECVGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDM 101
Query: 388 --YYSKDEKLMVYDYYSLGSVSAMLHSERGEG----RIPLDWDTXXXXXXXXXXXXXXXX 441
+S + ++ Y+ +GS+ L + RI L
Sbjct: 102 TSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVL-----SIASGLAHLHIEIFG 156
Query: 442 XXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALA--------PVIARAAGYRAP 493
+ H ++KS NI + C++DLGL + S P + Y AP
Sbjct: 157 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVG-TKRYMAP 215
Query: 494 EVTDSR------KATQASDVYSFGVVLLEI 517
EV D + + D+++FG+VL E+
Sbjct: 216 EVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 88/234 (37%), Gaps = 19/234 (8%)
Query: 329 AEVLGKGTFGMAYKAI-LEDGTTVVVKRLKDV-------NVGKRDFEQQMEIVGSIRHEN 380
EV+GKG F + + I E G VK + DV + D +++ I ++H +
Sbjct: 31 CEVIGKGPFSVVRRCINRETGQQFAVK-IVDVAKFTSSPGLSTEDLKREASICHMLKHPH 89
Query: 381 VVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXX 440
+VEL Y S MV+++ + + G + +
Sbjct: 90 IVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFV----YSEAVASHYMRQILEAL 145
Query: 441 XXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG------YRAPE 494
++H ++K + L S++ LG + L A G + APE
Sbjct: 146 RYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPE 205
Query: 495 VTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWT 548
V + DV+ GV+L +L+G P + T +++ + + +W+
Sbjct: 206 VVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWS 259
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 88/234 (37%), Gaps = 19/234 (8%)
Query: 329 AEVLGKGTFGMAYKAI-LEDGTTVVVKRLKDV-------NVGKRDFEQQMEIVGSIRHEN 380
EV+GKG F + + I E G VK + DV + D +++ I ++H +
Sbjct: 29 CEVIGKGPFSVVRRCINRETGQQFAVK-IVDVAKFTSSPGLSTEDLKREASICHMLKHPH 87
Query: 381 VVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXX 440
+VEL Y S MV+++ + + G + +
Sbjct: 88 IVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFV----YSEAVASHYMRQILEAL 143
Query: 441 XXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG------YRAPE 494
++H ++K + L S++ LG + L A G + APE
Sbjct: 144 RYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPE 203
Query: 495 VTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWT 548
V + DV+ GV+L +L+G P + T +++ + + +W+
Sbjct: 204 VVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWS 257
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 87/213 (40%), Gaps = 35/213 (16%)
Query: 331 VLGKGTFGMAYKAIL--------EDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVV 382
VLGKG+FG + IL E V+ KR K ++++++ + H N++
Sbjct: 56 VLGKGSFG---EVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIM 112
Query: 383 ELKAYYYSKDEKLMVYDYYSLGS-----VSAMLHSERGEGRIPLDWDTXXXXXXXXXXXX 437
+L ++ K +V + Y+ G +S SE RI
Sbjct: 113 KLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARI-------------IRQVL 159
Query: 438 XXXXXXXXXKLVHGNIKSSNIFLNSQQYGC---VSDLGLTTITSALAPVIAR--AAGYRA 492
K+VH ++K N+ L S+ + D GL+T A + + A Y A
Sbjct: 160 SGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIA 219
Query: 493 PEVTDSRKATQASDVYSFGVVLLEILTGKSPIH 525
PEV + DV+S GV+L +L+G P +
Sbjct: 220 PEVLHG-TYDEKCDVWSTGVILYILLSGCPPFN 251
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 81/210 (38%), Gaps = 29/210 (13%)
Query: 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAY-- 387
E +GKG +G ++ + G V VK + E ++ +RHEN++ A
Sbjct: 14 ECVGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDM 72
Query: 388 --YYSKDEKLMVYDYYSLGSVSAMLHSERGEG----RIPLDWDTXXXXXXXXXXXXXXXX 441
+S + ++ Y+ +GS+ L + RI L
Sbjct: 73 TSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVL-----SIASGLAHLHIEIFG 127
Query: 442 XXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALA--------PVIARAAGYRAP 493
+ H ++KS NI + C++DLGL + S P + Y AP
Sbjct: 128 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVG-TKRYMAP 186
Query: 494 EVTDSR------KATQASDVYSFGVVLLEI 517
EV D + + D+++FG+VL E+
Sbjct: 187 EVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 85/200 (42%), Gaps = 16/200 (8%)
Query: 330 EVLGKGTFGMAYKAI-LEDGTTVVVKRLKDVNVGKRDFE-QQMEIVGSIRHENVVELKAY 387
E +G+G G Y A+ + G V ++++ K++ ++ ++ ++ N+V
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 388 YYSKDEKLMVYDYYSLGSVSAML-HSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXX 446
Y DE +V +Y + GS++ ++ + EG+I
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI----------AAVCRECLQALEFLHSN 136
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG---YRAPEVTDSRKATQ 503
+++H +IKS NI L ++D G + + G + APEV +
Sbjct: 137 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGP 196
Query: 504 ASDVYSFGVVLLEILTGKSP 523
D++S G++ +E++ G+ P
Sbjct: 197 KVDIWSLGIMAIEMIEGEPP 216
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 87/213 (40%), Gaps = 35/213 (16%)
Query: 331 VLGKGTFGMAYKAIL--------EDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVV 382
VLGKG+FG + IL E V+ KR K ++++++ + H N++
Sbjct: 57 VLGKGSFG---EVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIM 113
Query: 383 ELKAYYYSKDEKLMVYDYYSLGS-----VSAMLHSERGEGRIPLDWDTXXXXXXXXXXXX 437
+L ++ K +V + Y+ G +S SE RI
Sbjct: 114 KLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARI-------------IRQVL 160
Query: 438 XXXXXXXXXKLVHGNIKSSNIFLNSQQYGC---VSDLGLTTITSALAPVIAR--AAGYRA 492
K+VH ++K N+ L S+ + D GL+T A + + A Y A
Sbjct: 161 SGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIA 220
Query: 493 PEVTDSRKATQASDVYSFGVVLLEILTGKSPIH 525
PEV + DV+S GV+L +L+G P +
Sbjct: 221 PEVLHG-TYDEKCDVWSTGVILYILLSGCPPFN 252
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 82/204 (40%), Gaps = 18/204 (8%)
Query: 329 AEVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNVGKRD----FEQQMEIVGSIRHENVVE 383
+ LG GTFG + G V VK L + D +++++ + RH ++++
Sbjct: 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIK 75
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXX 443
L + + MV +Y S G + + GR+
Sbjct: 76 LYQVISTPTDFFMVMEYVSGGELFDYICKH---GRV-----EEMEARRLFQQILSAVDYC 127
Query: 444 XXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG---YRAPEVTDSR- 499
+VH ++K N+ L++ ++D GL+ + S + + G Y APEV R
Sbjct: 128 HRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD-GEFLRTSCGSPNYAAPEVISGRL 186
Query: 500 KATQASDVYSFGVVLLEILTGKSP 523
A D++S GV+L +L G P
Sbjct: 187 YAGPEVDIWSCGVILYALLCGTLP 210
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 80/202 (39%), Gaps = 22/202 (10%)
Query: 332 LGKGTFGMAYKAI-LEDGTTVVVKRL----KDVNVGKRDFEQQMEIVGSIRHENVVELKA 386
+G G +G AI G V +K+L + KR + +++ ++ ++HENV+ L
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAY-RELLLLKHMQHENVIGLLD 108
Query: 387 YYYSKDEKLMVYDYYSL-----GSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXX 441
+ YD+Y + + ++ E E +I
Sbjct: 109 VFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKI----------QYLVYQMLKGLK 158
Query: 442 XXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDS-RK 500
+VH ++K N+ +N + D GL A YRAPEV S
Sbjct: 159 YIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMH 218
Query: 501 ATQASDVYSFGVVLLEILTGKS 522
Q D++S G ++ E+LTGK+
Sbjct: 219 YNQTVDIWSVGCIMAEMLTGKT 240
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 85/200 (42%), Gaps = 16/200 (8%)
Query: 330 EVLGKGTFGMAYKAI-LEDGTTVVVKRLKDVNVGKRDFE-QQMEIVGSIRHENVVELKAY 387
E +G+G G Y A+ + G V ++++ K++ ++ ++ ++ N+V
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 388 YYSKDEKLMVYDYYSLGSVSAML-HSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXX 446
Y DE +V +Y + GS++ ++ + EG+I
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI----------AAVCRECLQALEFLHSN 135
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG---YRAPEVTDSRKATQ 503
+++H +IKS NI L ++D G + + G + APEV +
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGP 195
Query: 504 ASDVYSFGVVLLEILTGKSP 523
D++S G++ +E++ G+ P
Sbjct: 196 KVDIWSLGIMAIEMIEGEPP 215
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 82/204 (40%), Gaps = 18/204 (8%)
Query: 329 AEVLGKGTFGMAYKAILE-DGTTVVVKRLKDVNVGKRD----FEQQMEIVGSIRHENVVE 383
+ LG GTFG + G V VK L + D +++++ + RH ++++
Sbjct: 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIK 75
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXX 443
L + + MV +Y S G + + GR+
Sbjct: 76 LYQVISTPTDFFMVMEYVSGGELFDYICKH---GRV-----EEMEARRLFQQILSAVDYC 127
Query: 444 XXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG---YRAPEVTDSR- 499
+VH ++K N+ L++ ++D GL+ + S + + G Y APEV R
Sbjct: 128 HRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD-GEFLRDSCGSPNYAAPEVISGRL 186
Query: 500 KATQASDVYSFGVVLLEILTGKSP 523
A D++S GV+L +L G P
Sbjct: 187 YAGPEVDIWSCGVILYALLCGTLP 210
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Query: 448 LVHGNIKSSNIFLNSQQYGC---VSDLGLTTITSALAPVIAR--AAGYRAPEVTDSRKAT 502
+VH ++K NI L S++ C + D GL+T + R A Y APEV
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYD 200
Query: 503 QASDVYSFGVVLLEILTGKSPIH 525
+ DV+S GV+L +L+G P +
Sbjct: 201 EKCDVWSAGVILYILLSGTPPFY 223
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 84/212 (39%), Gaps = 32/212 (15%)
Query: 330 EVLGKGTFGMAYKAILEDGTT---VVVKRL-KDVNVGKR-DFEQQMEIVGSIRHENVVEL 384
+VLG G F A ED T V +K + K GK E ++ ++ I+H N+V L
Sbjct: 24 DVLGTGAFSEVILA--EDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVAL 81
Query: 385 KAYYYSKDEKLMVYDYYSLGS-----VSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXX 439
Y S ++ S G V ++ER R+
Sbjct: 82 DDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIF-------------QVLDA 128
Query: 440 XXXXXXXKLVHGNIKSSNIF---LNSQQYGCVSDLGLTTITSALAPVIARAA---GYRAP 493
+VH ++K N+ L+ +SD GL+ + V++ A GY AP
Sbjct: 129 VKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP-GSVLSTACGTPGYVAP 187
Query: 494 EVTDSRKATQASDVYSFGVVLLEILTGKSPIH 525
EV + ++A D +S GV+ +L G P +
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFY 219
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTI-------TSALAPVIARAAGYRAPEVT-DSR 499
++H ++K SN+ LN+ + D GL + T L +A YRAPE+ +S+
Sbjct: 145 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA-TRWYRAPEIMLNSK 203
Query: 500 KATQASDVYSFGVVLLEILTGK 521
T++ D++S G +L E+L+ +
Sbjct: 204 GYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTI-------TSALAPVIARAAGYRAPEVT-DSR 499
++H ++K SN+ LN+ + D GL + T L +A YRAPE+ +S+
Sbjct: 145 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA-TRWYRAPEIMLNSK 203
Query: 500 KATQASDVYSFGVVLLEILTGK 521
T++ D++S G +L E+L+ +
Sbjct: 204 GYTKSIDIWSVGCILAEMLSNR 225
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTI-------TSALAPVIARAAGYRAPEVT-DSR 499
++H ++K SN+ LN+ + D GL + T L +A YRAPE+ +S+
Sbjct: 145 VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVA-TRWYRAPEIMLNSK 203
Query: 500 KATQASDVYSFGVVLLEILTGK 521
T++ D++S G +L E+L+ +
Sbjct: 204 GYTKSIDIWSVGCILAEMLSNR 225
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 448 LVHGNIKSSNIFLNSQQYGC---VSDLGLTTI--TSALAPVIARAAGYRAPEV---TDSR 499
++H ++K N+ L+SQ+ C ++D G + I ++L + Y APEV +
Sbjct: 260 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTA 319
Query: 500 KATQASDVYSFGVVLLEILTGKSPI 524
+A D +S GV+L L+G P
Sbjct: 320 GYNRAVDCWSLGVILFICLSGYPPF 344
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 58/109 (53%), Gaps = 12/109 (11%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTI-------TSALAPVIARAAGYRAPEVT-DSR 499
++H ++K SN+ LN+ + D GL + T L +A YRAPE+ +S+
Sbjct: 149 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA-TRWYRAPEIMLNSK 207
Query: 500 KATQASDVYSFGVVLLEILTGKSPIHTTGG--DELVHLVRWVHSVVREE 546
T++ D++S G +L E+L+ + PI D+L H++ + S +E+
Sbjct: 208 GYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQED 255
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 85/200 (42%), Gaps = 16/200 (8%)
Query: 330 EVLGKGTFGMAYKAI-LEDGTTVVVKRLKDVNVGKRDFE-QQMEIVGSIRHENVVELKAY 387
E +G+G G Y A+ + G V ++++ K++ ++ ++ ++ N+V
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 388 YYSKDEKLMVYDYYSLGSVSAML-HSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXX 446
Y DE +V +Y + GS++ ++ + EG+I
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI----------AAVCRECLQALEFLHSN 135
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG---YRAPEVTDSRKATQ 503
+++H +IKS NI L ++D G + + G + APEV +
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGP 195
Query: 504 ASDVYSFGVVLLEILTGKSP 523
D++S G++ +E++ G+ P
Sbjct: 196 KVDIWSLGIMAIEMIEGEPP 215
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D GL T YRAPE+ + Q D
Sbjct: 151 IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 210
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+LTG++
Sbjct: 211 IWSVGCIMAELLTGRT 226
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTI-------TSALAPVIARAAGYRAPEVT-DSR 499
++H ++K SN+ LN+ + D GL + T L +A YRAPE+ +S+
Sbjct: 149 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA-TRWYRAPEIMLNSK 207
Query: 500 KATQASDVYSFGVVLLEILTGK 521
T++ D++S G +L E+L+ +
Sbjct: 208 GYTKSIDIWSVGCILAEMLSNR 229
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Query: 448 LVHGNIKSSNIFLNSQQYGC---VSDLGLTTITSALAPVIAR--AAGYRAPEVTDSRKAT 502
+VH ++K NI L S++ C + D GL+T + R A Y APEV
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYD 200
Query: 503 QASDVYSFGVVLLEILTGKSPIH 525
+ DV+S GV+L +L+G P +
Sbjct: 201 EKCDVWSAGVILYILLSGTPPFY 223
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D GL T YRAPE+ + Q D
Sbjct: 152 IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 211
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+LTG++
Sbjct: 212 IWSVGCIMAELLTGRT 227
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 81/210 (38%), Gaps = 29/210 (13%)
Query: 330 EVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAY-- 387
E +GKG +G ++ + G V VK + E ++ +RHEN++ A
Sbjct: 14 ECVGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDM 72
Query: 388 --YYSKDEKLMVYDYYSLGSVSAMLHSERGEG----RIPLDWDTXXXXXXXXXXXXXXXX 441
+S + ++ Y+ +GS+ L + RI L
Sbjct: 73 TSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLS-----IASGLAHLHIEIFG 127
Query: 442 XXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALA--------PVIARAAGYRAP 493
+ H ++KS NI + C++DLGL + S P + Y AP
Sbjct: 128 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVG-TKRYMAP 186
Query: 494 EVTDSR------KATQASDVYSFGVVLLEI 517
EV D + + D+++FG+VL E+
Sbjct: 187 EVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D GL T YRAPE+ + Q D
Sbjct: 151 IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 210
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+LTG++
Sbjct: 211 IWSVGCIMAELLTGRT 226
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D GL T YRAPE+ + Q D
Sbjct: 146 IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 205
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+LTG++
Sbjct: 206 IWSVGCIMAELLTGRT 221
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D GL T YRAPE+ + Q D
Sbjct: 148 IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 207
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+LTG++
Sbjct: 208 IWSVGCIMAELLTGRT 223
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D GL T YRAPE+ + Q D
Sbjct: 157 IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 216
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+LTG++
Sbjct: 217 IWSVGCIMAELLTGRT 232
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTI-------TSALAPVIARAAGYRAPEVT-DSR 499
++H ++K SN+ LN+ + D GL + T L +A YRAPE+ +S+
Sbjct: 165 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA-TRWYRAPEIMLNSK 223
Query: 500 KATQASDVYSFGVVLLEILTGK 521
T++ D++S G +L E+L+ +
Sbjct: 224 GYTKSIDIWSVGCILAEMLSNR 245
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 58/109 (53%), Gaps = 12/109 (11%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTI-------TSALAPVIARAAGYRAPEVT-DSR 499
++H ++K SN+ LN+ + D GL + T L +A YRAPE+ +S+
Sbjct: 147 VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVA-TRWYRAPEIMLNSK 205
Query: 500 KATQASDVYSFGVVLLEILTGKSPIHTTGG--DELVHLVRWVHSVVREE 546
T++ D++S G +L E+L+ + PI D+L H++ + S +E+
Sbjct: 206 GYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQED 253
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Query: 448 LVHGNIKSSNIFLNSQQYGC---VSDLGLTTITSALAPVIAR--AAGYRAPEVTDSRKAT 502
+VH ++K NI L S++ C + D GL+T + R A Y APEV
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYD 200
Query: 503 QASDVYSFGVVLLEILTGKSPIH 525
+ DV+S GV+L +L+G P +
Sbjct: 201 EKCDVWSAGVILYILLSGTPPFY 223
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 81/193 (41%), Gaps = 39/193 (20%)
Query: 448 LVHGNIKSSNIFLNSQQYGC---VSDLGLTTI--TSALAPVIARAAGYRAPEVTDSRKAT 502
++H ++K N+ L+SQ+ C ++D G + I ++L + Y APEV S
Sbjct: 135 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTA 194
Query: 503 ---QASDVYSFGVVLLEILTGKSPI--HTTGGDELVHLVRWVHSVVREEW---TAEVFDV 554
+A D +S GV+L L+G P H T + ++ + E W + + D+
Sbjct: 195 GYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDL 254
Query: 555 ----------------ELLRYPNIE-EEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
E LR+P ++ E+M Q +S ++ +P V+
Sbjct: 255 VKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLLS----EENESTALPQVL-----A 305
Query: 598 RPNDSENRPSSGN 610
+P+ S RP G
Sbjct: 306 QPSTSRKRPREGE 318
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/297 (20%), Positives = 117/297 (39%), Gaps = 65/297 (21%)
Query: 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLK---DVNVGKRDFEQQMEIVGSIRHENVVELK 385
E +G+GT+G+ YKA + G V +K+++ + +++ ++ + H N+V+L
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 386 AYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXX 445
+++++ +V+++ + M S +PL
Sbjct: 72 DVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPL-------IKSYLFQLLQGLAFCHS 124
Query: 446 XKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG--------------YR 491
+++H ++K N+ +N++ ++D GL ARA G YR
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGL-----------ARAFGVPVRTYXHEVVTLWYR 173
Query: 492 APEV-TDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAE 550
APE+ + + A D++S G + E++T ++ G E+ L R
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFR------------- 218
Query: 551 VFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR--VIENVRPNDSENR 605
+ R +E+V V MPD +P P R + V P D + R
Sbjct: 219 -----IFRTLGTPDEVV------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGR 264
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 81/193 (41%), Gaps = 39/193 (20%)
Query: 448 LVHGNIKSSNIFLNSQQYGC---VSDLGLTTI--TSALAPVIARAAGYRAPEVTDSRKAT 502
++H ++K N+ L+SQ+ C ++D G + I ++L + Y APEV S
Sbjct: 135 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTA 194
Query: 503 ---QASDVYSFGVVLLEILTGKSPI--HTTGGDELVHLVRWVHSVVREEW---TAEVFDV 554
+A D +S GV+L L+G P H T + ++ + E W + + D+
Sbjct: 195 GYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDL 254
Query: 555 ----------------ELLRYPNIE-EEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
E LR+P ++ E+M Q +S ++ +P V+
Sbjct: 255 VKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLLS----EENESTALPQVL-----A 305
Query: 598 RPNDSENRPSSGN 610
+P+ S RP G
Sbjct: 306 QPSTSRKRPREGE 318
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 448 LVHGNIKSSNIFLNSQQYGC---VSDLGLTTI--TSALAPVIARAAGYRAPEV---TDSR 499
++H ++K N+ L+SQ+ C ++D G + I ++L + Y APEV +
Sbjct: 274 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTA 333
Query: 500 KATQASDVYSFGVVLLEILTGKSPI 524
+A D +S GV+L L+G P
Sbjct: 334 GYNRAVDCWSLGVILFICLSGYPPF 358
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 81/193 (41%), Gaps = 39/193 (20%)
Query: 448 LVHGNIKSSNIFLNSQQYGC---VSDLGLTTI--TSALAPVIARAAGYRAPEVTDSRKAT 502
++H ++K N+ L+SQ+ C ++D G + I ++L + Y APEV S
Sbjct: 134 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTA 193
Query: 503 ---QASDVYSFGVVLLEILTGKSPI--HTTGGDELVHLVRWVHSVVREEW---TAEVFDV 554
+A D +S GV+L L+G P H T + ++ + E W + + D+
Sbjct: 194 GYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDL 253
Query: 555 ----------------ELLRYPNIE-EEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
E LR+P ++ E+M Q +S ++ +P V+
Sbjct: 254 VKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLLS----EENESTALPQVL-----A 304
Query: 598 RPNDSENRPSSGN 610
+P+ S RP G
Sbjct: 305 QPSTSRKRPREGE 317
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTI----TSALAPVIARAAGYRAPEVTDSRKAT 502
+ VH +I + N+ ++S + D GL+ T A + APE + R+ T
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 190
Query: 503 QASDVYSFGVVLLEILT-GKSPIHTTGGDELV 533
ASDV+ FGV + EIL G P ++++
Sbjct: 191 SASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 222
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTI----TSALAPVIARAAGYRAPEVTDSRKAT 502
+ VH +I + N+ ++S + D GL+ T A + APE + R+ T
Sbjct: 128 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 187
Query: 503 QASDVYSFGVVLLEILT-GKSPIHTTGGDELV 533
ASDV+ FGV + EIL G P ++++
Sbjct: 188 SASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 219
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D GL T YRAPE+ + Q D
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVD 205
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+LTG++
Sbjct: 206 IWSVGCIMAELLTGRT 221
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D GL T YRAPE+ + Q D
Sbjct: 146 IIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 205
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+LTG++
Sbjct: 206 IWSVGCIMAELLTGRT 221
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D GL T YRAPE+ + Q D
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVD 205
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+LTG++
Sbjct: 206 IWSVGCIMAELLTGRT 221
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 81/193 (41%), Gaps = 39/193 (20%)
Query: 448 LVHGNIKSSNIFLNSQQYGC---VSDLGLTTI--TSALAPVIARAAGYRAPEVTDSRKAT 502
++H ++K N+ L+SQ+ C ++D G + I ++L + Y APEV S
Sbjct: 141 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTA 200
Query: 503 ---QASDVYSFGVVLLEILTGKSPI--HTTGGDELVHLVRWVHSVVREEW---TAEVFDV 554
+A D +S GV+L L+G P H T + ++ + E W + + D+
Sbjct: 201 GYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDL 260
Query: 555 ----------------ELLRYPNIE-EEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIENV 597
E LR+P ++ E+M Q +S ++ +P V+
Sbjct: 261 VKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLLS----EENESTALPQVL-----A 311
Query: 598 RPNDSENRPSSGN 610
+P+ S RP G
Sbjct: 312 QPSTSRKRPREGE 324
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTI----TSALAPVIARAAGYRAPEVTDSRKAT 502
+ VH +I + N+ ++S + D GL+ T A + APE + R+ T
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 190
Query: 503 QASDVYSFGVVLLEILT-GKSPIHTTGGDELV 533
ASDV+ FGV + EIL G P ++++
Sbjct: 191 SASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 222
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/299 (20%), Positives = 116/299 (38%), Gaps = 65/299 (21%)
Query: 328 SAEVLGKGTFGMAYKAILE-DGTTVVVKRLK---DVNVGKRDFEQQMEIVGSIRHENVVE 383
E +G+GT+G+ YKA + G V +K+++ + +++ ++ + H N+V+
Sbjct: 14 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 73
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXX 443
L +++++ +V+++ M S +PL
Sbjct: 74 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL-------IKSYLFQLLQGLAFC 126
Query: 444 XXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-------------- 489
+++H ++K N+ +N++ ++D GL ARA G
Sbjct: 127 HSHRVLHRDLKPQNLLINTEGAIKLADFGL-----------ARAFGVPVRTYTHEVVTLW 175
Query: 490 YRAPEVTDSRK-ATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWT 548
YRAPE+ K + A D++S G + E++T ++ G E+ L R + R T
Sbjct: 176 YRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFR----IFRTLGT 229
Query: 549 AEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR--VIENVRPNDSENR 605
+ ++ V MPD +P P R + V P D + R
Sbjct: 230 PD--------------------EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGR 268
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 88/229 (38%), Gaps = 32/229 (13%)
Query: 332 LGKGTFGMAYKAILED------GTTVVVKRLKD-VNVGKR-DFEQQMEIVGSIRHENVVE 383
LG+G+FGM Y+ D T V VK + + ++ +R +F + ++ +VV
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGE-----GRIPLDWDTXXXXXXXXXXXXX 438
L L+V + + G + + L S R E GR P T
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP---PTLQEMIQMAAEIAD 140
Query: 439 XXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTIT----------SALAPVIARAA 488
K VH ++ + N + + D G+T L PV
Sbjct: 141 GMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV----- 195
Query: 489 GYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLV 536
+ APE T +SD++SFGVVL EI + + P ++++ V
Sbjct: 196 RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFV 244
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D GL T YRAPE+ + Q D
Sbjct: 142 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVD 201
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+LTG++
Sbjct: 202 IWSVGCIMAELLTGRT 217
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG---YRAPEVTDSRKATQA 504
++H ++K +N+FL+ +Q + D GL I + G Y +PE + +
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQMNRMSYNEK 196
Query: 505 SDVYSFGVVLLEILTGKSPIHTTGGDELVHLVR 537
SD++S G +L E+ P EL +R
Sbjct: 197 SDIWSLGCLLYELCALMPPFTAFSQKELAGKIR 229
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTI----TSALAPVIARAAGYRAPEVTDSRKAT 502
+ VH +I + N+ ++S + D GL+ T A + APE + R+ T
Sbjct: 133 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 192
Query: 503 QASDVYSFGVVLLEILT-GKSPIHTTGGDELV 533
ASDV+ FGV + EIL G P ++++
Sbjct: 193 SASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 224
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTI----TSALAPVIARAAGYRAPEVTDSRKAT 502
+ VH +I + N+ ++S + D GL+ T A + APE + R+ T
Sbjct: 134 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 193
Query: 503 QASDVYSFGVVLLEILT-GKSPIHTTGGDELV 533
ASDV+ FGV + EIL G P ++++
Sbjct: 194 SASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 225
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D GL T+ YRAPE+ + Q D
Sbjct: 153 IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVD 212
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+LTG++
Sbjct: 213 IWSVGCIMAELLTGRT 228
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D GL T+ YRAPE+ + Q D
Sbjct: 153 IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVD 212
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+LTG++
Sbjct: 213 IWSVGCIMAELLTGRT 228
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D GL T+ YRAPE+ + Q D
Sbjct: 153 IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVD 212
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+LTG++
Sbjct: 213 IWSVGCIMAELLTGRT 228
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTI----TSALAPVIARAAGYRAPEVTDSRKAT 502
+ VH +I + N+ ++S + D GL+ T A + APE + R+ T
Sbjct: 136 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 195
Query: 503 QASDVYSFGVVLLEILT-GKSPIHTTGGDELV 533
ASDV+ FGV + EIL G P ++++
Sbjct: 196 SASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 227
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Query: 448 LVHGNIKSSNIFLNSQQYGC---VSDLGLTTITSALAPVIAR--AAGYRAPEVTDSRKAT 502
+VH ++K N+ L S++ + D GL+ + + R A Y APEV +K
Sbjct: 157 IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVL-RKKYD 215
Query: 503 QASDVYSFGVVLLEILTGKSPIHTTGGDELVHLV 536
+ DV+S GV+L +L G P E++ V
Sbjct: 216 EKCDVWSIGVILFILLAGYPPFGGQTDQEILRKV 249
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 58/109 (53%), Gaps = 12/109 (11%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTI-------TSALAPVIARAAGYRAPEVT-DSR 499
++H ++K SN+ LN+ + D GL + T L +A YRAPE+ +S+
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA-TRWYRAPEIMLNSK 207
Query: 500 KATQASDVYSFGVVLLEILTGKSPIHTTGG--DELVHLVRWVHSVVREE 546
T++ D++S G +L E+L+ + PI D+L H++ + S +E+
Sbjct: 208 GYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQED 255
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 58/109 (53%), Gaps = 12/109 (11%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTI-------TSALAPVIARAAGYRAPEVT-DSR 499
++H ++K SN+ LN+ + D GL + T L +A YRAPE+ +S+
Sbjct: 143 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA-TRWYRAPEIMLNSK 201
Query: 500 KATQASDVYSFGVVLLEILTGKSPIHTTGG--DELVHLVRWVHSVVREE 546
T++ D++S G +L E+L+ + PI D+L H++ + S +E+
Sbjct: 202 GYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQED 249
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTI----TSALAPVIARAAGYRAPEVTDSRKAT 502
+ VH +I + N+ ++S + D GL+ T A + APE + R+ T
Sbjct: 159 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 218
Query: 503 QASDVYSFGVVLLEILT-GKSPIHTTGGDELV 533
ASDV+ FGV + EIL G P ++++
Sbjct: 219 SASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 250
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 8/84 (9%)
Query: 448 LVHGNIKSSNIFLNSQQYGC---VSDLGLTTI--TSALAPVIARAAGYRAPEVTDSRKAT 502
++H ++K N+ L+SQ+ C ++D G + I ++L + Y APEV S
Sbjct: 135 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTA 194
Query: 503 ---QASDVYSFGVVLLEILTGKSP 523
+A D +S GV+L L+G P
Sbjct: 195 GYNRAVDCWSLGVILFICLSGYPP 218
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTI-------TSALAPVIARAAGYRAPEVT-DSR 499
++H ++K SN+ LN+ + D GL + T L +A YRAPE+ +S+
Sbjct: 143 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA-TRWYRAPEIMLNSK 201
Query: 500 KATQASDVYSFGVVLLEILTGK 521
T++ D++S G +L E+L+ +
Sbjct: 202 GYTKSIDIWSVGCILAEMLSNR 223
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/299 (19%), Positives = 116/299 (38%), Gaps = 65/299 (21%)
Query: 328 SAEVLGKGTFGMAYKAILE-DGTTVVVKRLK---DVNVGKRDFEQQMEIVGSIRHENVVE 383
E +G+GT+G+ YKA + G V +K+++ + +++ ++ + H N+V+
Sbjct: 14 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 73
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXX 443
L +++++ +V+++ M S +PL
Sbjct: 74 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL-------IKSYLFQLLQGLAFC 126
Query: 444 XXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-------------- 489
+++H ++K N+ +N++ ++D GL ARA G
Sbjct: 127 HSHRVLHRDLKPQNLLINTEGAIKLADFGL-----------ARAFGVPVRTYTHEVVTLW 175
Query: 490 YRAPEV-TDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWT 548
YRAPE+ + + A D++S G + E++T ++ G E+ L R + R T
Sbjct: 176 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFR----IFRTLGT 229
Query: 549 AEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR--VIENVRPNDSENR 605
+ ++ V MPD +P P R + V P D + R
Sbjct: 230 PD--------------------EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGR 268
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG----YRAPEVTDSRKAT 502
+ VH +I + N+ ++S + D GL+ A + APE + R+ T
Sbjct: 511 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 570
Query: 503 QASDVYSFGVVLLEILT-GKSPIHTTGGDELV 533
ASDV+ FGV + EIL G P ++++
Sbjct: 571 SASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 602
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTI-------TSALAPVIARAAGYRAPEVT-DSR 499
++H ++K SN+ LN+ + D GL + T L +A YRAPE+ +S+
Sbjct: 145 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA-TRWYRAPEIMLNSK 203
Query: 500 KATQASDVYSFGVVLLEILTGK 521
T++ D++S G +L E+L+ +
Sbjct: 204 GYTKSIDIWSVGCILAEMLSNR 225
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/307 (19%), Positives = 121/307 (39%), Gaps = 67/307 (21%)
Query: 320 DLEDLLRASAEVLGKGTFGMAYKAILE-DGTTVVVKRLK---DVNVGKRDFEQQMEIVGS 375
D+E+ + E +G+GT+G+ YKA + G V +K+++ + +++ ++
Sbjct: 5 DMENFQKV--EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 62
Query: 376 IRHENVVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXX 435
+ H N+V+L +++++ +V+++ M S +PL
Sbjct: 63 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL-------IKSYLFQ 115
Query: 436 XXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG------ 489
+++H ++K N+ +N++ ++D GL ARA G
Sbjct: 116 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL-----------ARAFGVPVRTY 164
Query: 490 --------YRAPEV-TDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVH 540
YRAPE+ + + A D++S G + E++T ++ G E+ L R
Sbjct: 165 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFR--- 219
Query: 541 SVVREEWTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR--VIENVR 598
+ R T + ++ V MPD +P P R + V
Sbjct: 220 -IFRTLGTPD--------------------EVVWPGVTSMPDYKPSFPKWARQDFSKVVP 258
Query: 599 PNDSENR 605
P D + R
Sbjct: 259 PLDEDGR 265
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 58/109 (53%), Gaps = 12/109 (11%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTI-------TSALAPVIARAAGYRAPEVT-DSR 499
++H ++K SN+ LN+ + D GL + T L +A YRAPE+ +S+
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA-TRWYRAPEIMLNSK 207
Query: 500 KATQASDVYSFGVVLLEILTGKSPIHTTGG--DELVHLVRWVHSVVREE 546
T++ D++S G +L E+L+ + PI D+L H++ + S +E+
Sbjct: 208 GYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQED 255
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 58/109 (53%), Gaps = 12/109 (11%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTI-------TSALAPVIARAAGYRAPEVT-DSR 499
++H ++K SN+ LN+ + D GL + T L +A YRAPE+ +S+
Sbjct: 153 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA-TRWYRAPEIMLNSK 211
Query: 500 KATQASDVYSFGVVLLEILTGKSPIHTTGG--DELVHLVRWVHSVVREE 546
T++ D++S G +L E+L+ + PI D+L H++ + S +E+
Sbjct: 212 GYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQED 259
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 58/109 (53%), Gaps = 12/109 (11%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTI-------TSALAPVIARAAGYRAPEVT-DSR 499
++H ++K SN+ LN+ + D GL + T L +A YRAPE+ +S+
Sbjct: 145 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA-TRWYRAPEIMLNSK 203
Query: 500 KATQASDVYSFGVVLLEILTGKSPIHTTGG--DELVHLVRWVHSVVREE 546
T++ D++S G +L E+L+ + PI D+L H++ + S +E+
Sbjct: 204 GYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQED 251
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/299 (19%), Positives = 116/299 (38%), Gaps = 65/299 (21%)
Query: 328 SAEVLGKGTFGMAYKAILE-DGTTVVVKRLK---DVNVGKRDFEQQMEIVGSIRHENVVE 383
E +G+GT+G+ YKA + G V +K+++ + +++ ++ + H N+V+
Sbjct: 10 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 69
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXX 443
L +++++ +V+++ M S +PL
Sbjct: 70 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL-------IKSYLFQLLQGLAFC 122
Query: 444 XXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-------------- 489
+++H ++K N+ +N++ ++D GL ARA G
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGL-----------ARAFGVPVRTYXHEVVTLW 171
Query: 490 YRAPEV-TDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWT 548
YRAPE+ + + A D++S G + E++T ++ G E+ L R + R T
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFR----IFRTLGT 225
Query: 549 AEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR--VIENVRPNDSENR 605
+ ++ V MPD +P P R + V P D + R
Sbjct: 226 PD--------------------EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGR 264
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/299 (20%), Positives = 116/299 (38%), Gaps = 65/299 (21%)
Query: 328 SAEVLGKGTFGMAYKAILE-DGTTVVVKRLK---DVNVGKRDFEQQMEIVGSIRHENVVE 383
E +G+GT+G+ YKA + G V +K+++ + +++ ++ + H N+V+
Sbjct: 7 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXX 443
L +++++ +V+++ M S +PL
Sbjct: 67 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL-------IKSYLFQLLQGLAFC 119
Query: 444 XXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-------------- 489
+++H ++K N+ +N++ ++D GL ARA G
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGL-----------ARAFGVPVRTYTHEVVTLW 168
Query: 490 YRAPEVTDSRK-ATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWT 548
YRAPE+ K + A D++S G + E++T ++ G E+ L R
Sbjct: 169 YRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFR----------- 215
Query: 549 AEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR--VIENVRPNDSENR 605
+ R +E+V V MPD +P P R + V P D + R
Sbjct: 216 -------IFRTLGTPDEVV------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGR 261
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 58/109 (53%), Gaps = 12/109 (11%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTI-------TSALAPVIARAAGYRAPEVT-DSR 499
++H ++K SN+ LN+ + D GL + T L +A YRAPE+ +S+
Sbjct: 150 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA-TRWYRAPEIMLNSK 208
Query: 500 KATQASDVYSFGVVLLEILTGKSPIHTTGG--DELVHLVRWVHSVVREE 546
T++ D++S G +L E+L+ + PI D+L H++ + S +E+
Sbjct: 209 GYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQED 256
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 58/109 (53%), Gaps = 12/109 (11%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTI-------TSALAPVIARAAGYRAPEVT-DSR 499
++H ++K SN+ LN+ + D GL + T L +A YRAPE+ +S+
Sbjct: 151 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA-TRWYRAPEIMLNSK 209
Query: 500 KATQASDVYSFGVVLLEILTGKSPIHTTGG--DELVHLVRWVHSVVREE 546
T++ D++S G +L E+L+ + PI D+L H++ + S +E+
Sbjct: 210 GYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQED 257
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 58/109 (53%), Gaps = 12/109 (11%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTI-------TSALAPVIARAAGYRAPEVT-DSR 499
++H ++K SN+ LN+ + D GL + T L +A YRAPE+ +S+
Sbjct: 142 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA-TRWYRAPEIMLNSK 200
Query: 500 KATQASDVYSFGVVLLEILTGKSPIHTTGG--DELVHLVRWVHSVVREE 546
T++ D++S G +L E+L+ + PI D+L H++ + S +E+
Sbjct: 201 GYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQED 248
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 58/109 (53%), Gaps = 12/109 (11%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTI-------TSALAPVIARAAGYRAPEVT-DSR 499
++H ++K SN+ LN+ + D GL + T L +A YRAPE+ +S+
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA-TRWYRAPEIMLNSK 207
Query: 500 KATQASDVYSFGVVLLEILTGKSPIHTTGG--DELVHLVRWVHSVVREE 546
T++ D++S G +L E+L+ + PI D+L H++ + S +E+
Sbjct: 208 GYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQED 255
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTI-------TSALAPVIARAAGYRAPEVT-DSR 499
++H ++K SN+ LN+ + D GL + T L +A YRAPE+ +S+
Sbjct: 147 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA-TRWYRAPEIMLNSK 205
Query: 500 KATQASDVYSFGVVLLEILTGK 521
T++ D++S G +L E+L+ +
Sbjct: 206 GYTKSIDIWSVGCILAEMLSNR 227
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/299 (20%), Positives = 116/299 (38%), Gaps = 65/299 (21%)
Query: 328 SAEVLGKGTFGMAYKAILE-DGTTVVVKRLK---DVNVGKRDFEQQMEIVGSIRHENVVE 383
E +G+GT+G+ YKA + G V +K+++ + +++ ++ + H N+V+
Sbjct: 10 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 69
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXX 443
L +++++ +V+++ M S +PL
Sbjct: 70 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL-------IKSYLFQLLQGLAFC 122
Query: 444 XXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-------------- 489
+++H ++K N+ +N++ ++D GL ARA G
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGL-----------ARAFGVPVRTYXHEVVTLW 171
Query: 490 YRAPEV-TDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWT 548
YRAPE+ + + A D++S G + E++T ++ G E+ L R
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFR----------- 218
Query: 549 AEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR--VIENVRPNDSENR 605
+ R +E+V V MPD +P P R + V P D + R
Sbjct: 219 -------IFRTLGTPDEVV------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGR 264
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/299 (20%), Positives = 116/299 (38%), Gaps = 65/299 (21%)
Query: 328 SAEVLGKGTFGMAYKAILE-DGTTVVVKRLK---DVNVGKRDFEQQMEIVGSIRHENVVE 383
E +G+GT+G+ YKA + G V +K+++ + +++ ++ + H N+V+
Sbjct: 9 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 68
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXX 443
L +++++ +V+++ M S +PL
Sbjct: 69 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL-------IKSYLFQLLQGLAFC 121
Query: 444 XXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-------------- 489
+++H ++K N+ +N++ ++D GL ARA G
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADFGL-----------ARAFGVPVRTYXHEVVTLW 170
Query: 490 YRAPEV-TDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWT 548
YRAPE+ + + A D++S G + E++T ++ G E+ L R
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFR----------- 217
Query: 549 AEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR--VIENVRPNDSENR 605
+ R +E+V V MPD +P P R + V P D + R
Sbjct: 218 -------IFRTLGTPDEVV------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGR 263
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 58/109 (53%), Gaps = 12/109 (11%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTI-------TSALAPVIARAAGYRAPEVT-DSR 499
++H ++K SN+ LN+ + D GL + T L +A YRAPE+ +S+
Sbjct: 147 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA-TRWYRAPEIMLNSK 205
Query: 500 KATQASDVYSFGVVLLEILTGKSPIHTTGG--DELVHLVRWVHSVVREE 546
T++ D++S G +L E+L+ + PI D+L H++ + S +E+
Sbjct: 206 GYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQED 253
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/214 (19%), Positives = 86/214 (40%), Gaps = 28/214 (13%)
Query: 330 EVLGKGTFGMAYKA-ILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSI-RHENVVELKAY 387
E++G GT+G YK ++ G +K + + + +Q++ ++ H N+
Sbjct: 30 ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGA 89
Query: 388 YYSK------DEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXX 441
+ K D+ +V ++ GSV+ ++ + +G + +W
Sbjct: 90 FIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKG-NTLKEEW-----IAYICREILRGLS 143
Query: 442 XXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIAR------AAGYRAPEV 495
K++H +IK N+ L + D G +++ L + R + APEV
Sbjct: 144 HLHQHKVIHRDIKGQNVLLTENAEVKLVDFG---VSAQLDRTVGRRNTFIGTPYWMAPEV 200
Query: 496 TDSRKATQA-----SDVYSFGVVLLEILTGKSPI 524
+ A SD++S G+ +E+ G P+
Sbjct: 201 IACDENPDATYDFKSDLWSLGITAIEMAEGAPPL 234
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D GL T YRAPE+ + Q D
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 205
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+LTG++
Sbjct: 206 IWSVGCIMAELLTGRT 221
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D GL T YRAPE+ + Q D
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 205
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+LTG++
Sbjct: 206 IWSVGCIMAELLTGRT 221
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/299 (20%), Positives = 116/299 (38%), Gaps = 65/299 (21%)
Query: 328 SAEVLGKGTFGMAYKAILE-DGTTVVVKRLK---DVNVGKRDFEQQMEIVGSIRHENVVE 383
E +G+GT+G+ YKA + G V +K+++ + +++ ++ + H N+V+
Sbjct: 9 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 68
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXX 443
L +++++ +V+++ M S +PL
Sbjct: 69 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL-------IKSYLFQLLQGLAFC 121
Query: 444 XXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-------------- 489
+++H ++K N+ +N++ ++D GL ARA G
Sbjct: 122 HSHRVLHRDLKPENLLINTEGAIKLADFGL-----------ARAFGVPVRTYXHEVVTLW 170
Query: 490 YRAPEV-TDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWT 548
YRAPE+ + + A D++S G + E++T ++ G E+ L R
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFR----------- 217
Query: 549 AEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR--VIENVRPNDSENR 605
+ R +E+V V MPD +P P R + V P D + R
Sbjct: 218 -------IFRTLGTPDEVV------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGR 263
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/299 (20%), Positives = 116/299 (38%), Gaps = 65/299 (21%)
Query: 328 SAEVLGKGTFGMAYKAILE-DGTTVVVKRLK---DVNVGKRDFEQQMEIVGSIRHENVVE 383
E +G+GT+G+ YKA + G V +K+++ + +++ ++ + H N+V+
Sbjct: 9 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 68
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXX 443
L +++++ +V+++ M S +PL
Sbjct: 69 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL-------IKSYLFQLLQGLAFC 121
Query: 444 XXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-------------- 489
+++H ++K N+ +N++ ++D GL ARA G
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADFGL-----------ARAFGVPVRTYXHEVVTLW 170
Query: 490 YRAPEV-TDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWT 548
YRAPE+ + + A D++S G + E++T ++ G E+ L R
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFR----------- 217
Query: 549 AEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR--VIENVRPNDSENR 605
+ R +E+V V MPD +P P R + V P D + R
Sbjct: 218 -------IFRTLGTPDEVV------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGR 263
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D GL T YRAPE+ + Q D
Sbjct: 152 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 211
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+LTG++
Sbjct: 212 IWSVGCIMAELLTGRT 227
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 58/109 (53%), Gaps = 12/109 (11%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTI-------TSALAPVIARAAGYRAPEVT-DSR 499
++H ++K SN+ LN+ + D GL + T L +A YRAPE+ +S+
Sbjct: 165 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA-TRWYRAPEIMLNSK 223
Query: 500 KATQASDVYSFGVVLLEILTGKSPIHTTGG--DELVHLVRWVHSVVREE 546
T++ D++S G +L E+L+ + PI D+L H++ + S +E+
Sbjct: 224 GYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQED 271
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/299 (19%), Positives = 116/299 (38%), Gaps = 65/299 (21%)
Query: 328 SAEVLGKGTFGMAYKAILE-DGTTVVVKRLK---DVNVGKRDFEQQMEIVGSIRHENVVE 383
E +G+GT+G+ YKA + G V +K+++ + +++ ++ + H N+V+
Sbjct: 11 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 70
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXX 443
L +++++ +V+++ M S +PL
Sbjct: 71 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL-------IKSYLFQLLQGLAFC 123
Query: 444 XXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-------------- 489
+++H ++K N+ +N++ ++D GL ARA G
Sbjct: 124 HSHRVLHRDLKPQNLLINTEGAIKLADFGL-----------ARAFGVPVRTYXHEVVTLW 172
Query: 490 YRAPEV-TDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWT 548
YRAPE+ + + A D++S G + E++T ++ G E+ L R + R T
Sbjct: 173 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFR----IFRTLGT 226
Query: 549 AEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR--VIENVRPNDSENR 605
+ ++ V MPD +P P R + V P D + R
Sbjct: 227 PD--------------------EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGR 265
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/244 (19%), Positives = 102/244 (41%), Gaps = 29/244 (11%)
Query: 329 AEVLGKGTFGMAYKAI-LEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAY 387
AE LG+G FG+ ++ + T + K +K + ++++ I+ RH N++ L
Sbjct: 10 AEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHES 69
Query: 388 YYSKDEKLMVYDYYSLGSVSAMLHS---ERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXX 444
+ S +E +M++++ S + +++ E E I
Sbjct: 70 FESMEELVMIFEFISGLDIFERINTSAFELNEREI----------VSYVHQVCEALQFLH 119
Query: 445 XXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAP-----VIARAAGYRAPEVTDSR 499
+ H +I+ NI +++ + + L P ++ A Y APEV
Sbjct: 120 SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQ-ARQLKPGDNFRLLFTAPEYYAPEVHQHD 178
Query: 500 KATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRY 559
+ A+D++S G ++ +L+G +P ++ + +++ E+T FD E +
Sbjct: 179 VVSTATDMWSLGTLVYVLLSGINPFLAETNQQI------IENIMNAEYT---FDEEAFKE 229
Query: 560 PNIE 563
+IE
Sbjct: 230 ISIE 233
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/299 (20%), Positives = 116/299 (38%), Gaps = 65/299 (21%)
Query: 328 SAEVLGKGTFGMAYKAILE-DGTTVVVKRLK---DVNVGKRDFEQQMEIVGSIRHENVVE 383
E +G+GT+G+ YKA + G V +K+++ + +++ ++ + H N+V+
Sbjct: 7 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXX 443
L +++++ +V+++ M S +PL
Sbjct: 67 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL-------IKSYLFQLLQGLAFC 119
Query: 444 XXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-------------- 489
+++H ++K N+ +N++ ++D GL ARA G
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGL-----------ARAFGVPVRTYXHEVVTLW 168
Query: 490 YRAPEV-TDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWT 548
YRAPE+ + + A D++S G + E++T ++ G E+ L R
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFR----------- 215
Query: 549 AEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR--VIENVRPNDSENR 605
+ R +E+V V MPD +P P R + V P D + R
Sbjct: 216 -------IFRTLGTPDEVV------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGR 261
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D GL T YRAPE+ + Q D
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 205
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+LTG++
Sbjct: 206 IWSVGCIMAELLTGRT 221
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D GL T YRAPE+ + Q D
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 205
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+LTG++
Sbjct: 206 IWSVGCIMAELLTGRT 221
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D GL T YRAPE+ + Q D
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 205
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+LTG++
Sbjct: 206 IWSVGCIMAELLTGRT 221
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D GL T YRAPE+ + Q D
Sbjct: 152 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 211
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+LTG++
Sbjct: 212 IWSVGCIMAELLTGRT 227
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/299 (20%), Positives = 116/299 (38%), Gaps = 65/299 (21%)
Query: 328 SAEVLGKGTFGMAYKAILE-DGTTVVVKRLK---DVNVGKRDFEQQMEIVGSIRHENVVE 383
E +G+GT+G+ YKA + G V +K+++ + +++ ++ + H N+V+
Sbjct: 7 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXX 443
L +++++ +V+++ M S +PL
Sbjct: 67 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL-------IKSYLFQLLQGLAFC 119
Query: 444 XXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-------------- 489
+++H ++K N+ +N++ ++D GL ARA G
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGL-----------ARAFGVPVRTYTHEVVTLW 168
Query: 490 YRAPEV-TDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWT 548
YRAPE+ + + A D++S G + E++T ++ G E+ L R
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFR----------- 215
Query: 549 AEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR--VIENVRPNDSENR 605
+ R +E+V V MPD +P P R + V P D + R
Sbjct: 216 -------IFRTLGTPDEVV------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGR 261
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D GL T YRAPE+ + Q D
Sbjct: 151 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 210
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+LTG++
Sbjct: 211 IWSVGCIMAELLTGRT 226
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D GL T YRAPE+ + Q D
Sbjct: 143 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 202
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+LTG++
Sbjct: 203 IWSVGCIMAELLTGRT 218
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D GL T YRAPE+ + Q D
Sbjct: 145 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 204
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+LTG++
Sbjct: 205 IWSVGCIMAELLTGRT 220
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D GL T YRAPE+ + Q D
Sbjct: 148 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 207
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+LTG++
Sbjct: 208 IWSVGCIMAELLTGRT 223
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/299 (20%), Positives = 116/299 (38%), Gaps = 65/299 (21%)
Query: 328 SAEVLGKGTFGMAYKAILE-DGTTVVVKRLK---DVNVGKRDFEQQMEIVGSIRHENVVE 383
E +G+GT+G+ YKA + G V +K+++ + +++ ++ + H N+V+
Sbjct: 6 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 65
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXX 443
L +++++ +V+++ M S +PL
Sbjct: 66 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL-------IKSYLFQLLQGLAFC 118
Query: 444 XXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-------------- 489
+++H ++K N+ +N++ ++D GL ARA G
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGL-----------ARAFGVPVRTYTHEVVTLW 167
Query: 490 YRAPEV-TDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWT 548
YRAPE+ + + A D++S G + E++T ++ G E+ L R
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFR----------- 214
Query: 549 AEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR--VIENVRPNDSENR 605
+ R +E+V V MPD +P P R + V P D + R
Sbjct: 215 -------IFRTLGTPDEVV------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGR 260
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D GL T YRAPE+ + Q D
Sbjct: 151 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 210
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+LTG++
Sbjct: 211 IWSVGCIMAELLTGRT 226
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D GL T YRAPE+ + Q D
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 205
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+LTG++
Sbjct: 206 IWSVGCIMAELLTGRT 221
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D GL T YRAPE+ + Q D
Sbjct: 153 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 212
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+LTG++
Sbjct: 213 IWSVGCIMAELLTGRT 228
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/299 (20%), Positives = 116/299 (38%), Gaps = 65/299 (21%)
Query: 328 SAEVLGKGTFGMAYKAILE-DGTTVVVKRLK---DVNVGKRDFEQQMEIVGSIRHENVVE 383
E +G+GT+G+ YKA + G V +K+++ + +++ ++ + H N+V+
Sbjct: 7 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXX 443
L +++++ +V+++ M S +PL
Sbjct: 67 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL-------IKSYLFQLLQGLSFC 119
Query: 444 XXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-------------- 489
+++H ++K N+ +N++ ++D GL ARA G
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGL-----------ARAFGVPVRTYTHEVVTLW 168
Query: 490 YRAPEV-TDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWT 548
YRAPE+ + + A D++S G + E++T ++ G E+ L R
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFR----------- 215
Query: 549 AEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR--VIENVRPNDSENR 605
+ R +E+V V MPD +P P R + V P D + R
Sbjct: 216 -------IFRTLGTPDEVV------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGR 261
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D GL T YRAPE+ + Q D
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATRWYRAPEIMLNWMHYNQTVD 205
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+LTG++
Sbjct: 206 IWSVGCIMAELLTGRT 221
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D GL T YRAPE+ + Q D
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 205
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+LTG++
Sbjct: 206 IWSVGCIMAELLTGRT 221
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D GL T YRAPE+ + Q D
Sbjct: 148 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 207
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+LTG++
Sbjct: 208 IWSVGCIMAELLTGRT 223
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D GL T YRAPE+ + Q D
Sbjct: 156 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 215
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+LTG++
Sbjct: 216 IWSVGCIMAELLTGRT 231
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D GL T YRAPE+ + Q D
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 205
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+LTG++
Sbjct: 206 IWSVGCIMAELLTGRT 221
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D GL T YRAPE+ + Q D
Sbjct: 157 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 216
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+LTG++
Sbjct: 217 IWSVGCIMAELLTGRT 232
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D GL T YRAPE+ + Q D
Sbjct: 165 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 224
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+LTG++
Sbjct: 225 IWSVGCIMAELLTGRT 240
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/299 (20%), Positives = 116/299 (38%), Gaps = 65/299 (21%)
Query: 328 SAEVLGKGTFGMAYKAILE-DGTTVVVKRLK---DVNVGKRDFEQQMEIVGSIRHENVVE 383
E +G+GT+G+ YKA + G V +K+++ + +++ ++ + H N+V+
Sbjct: 7 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXX 443
L +++++ +V+++ M S +PL
Sbjct: 67 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL-------IKSYLFQLLQGLAFC 119
Query: 444 XXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-------------- 489
+++H ++K N+ +N++ ++D GL ARA G
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGL-----------ARAFGVPVRTYXHEVVTLW 168
Query: 490 YRAPEV-TDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWT 548
YRAPE+ + + A D++S G + E++T ++ G E+ L R
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFR----------- 215
Query: 549 AEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR--VIENVRPNDSENR 605
+ R +E+V V MPD +P P R + V P D + R
Sbjct: 216 -------IFRTLGTPDEVV------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGR 261
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D GL T YRAPE+ + Q D
Sbjct: 166 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 225
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+LTG++
Sbjct: 226 IWSVGCIMAELLTGRT 241
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D GL T YRAPE+ + Q D
Sbjct: 169 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 228
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+LTG++
Sbjct: 229 IWSVGCIMAELLTGRT 244
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D GL T YRAPE+ + Q D
Sbjct: 166 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 225
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+LTG++
Sbjct: 226 IWSVGCIMAELLTGRT 241
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D GL T YRAPE+ + Q D
Sbjct: 148 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 207
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+LTG++
Sbjct: 208 IWSVGCIMAELLTGRT 223
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D GL T YRAPE+ + Q D
Sbjct: 165 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 224
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+LTG++
Sbjct: 225 IWSVGCIMAELLTGRT 240
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D GL T YRAPE+ + Q D
Sbjct: 158 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 217
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+LTG++
Sbjct: 218 IWSVGCIMAELLTGRT 233
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D GL T YRAPE+ + Q D
Sbjct: 152 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 211
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+LTG++
Sbjct: 212 IWSVGCIMAELLTGRT 227
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D GL T YRAPE+ + Q D
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 205
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+LTG++
Sbjct: 206 IWSVGCIMAELLTGRT 221
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D GL T YRAPE+ + Q D
Sbjct: 158 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 217
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+LTG++
Sbjct: 218 IWSVGCIMAELLTGRT 233
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/299 (19%), Positives = 116/299 (38%), Gaps = 65/299 (21%)
Query: 328 SAEVLGKGTFGMAYKAILE-DGTTVVVKRLK---DVNVGKRDFEQQMEIVGSIRHENVVE 383
E +G+GT+G+ YKA + G V +K+++ + +++ ++ + H N+V+
Sbjct: 6 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 65
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXX 443
L +++++ +V+++ M S +PL
Sbjct: 66 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL-------IKSYLFQLLQGLAFC 118
Query: 444 XXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-------------- 489
+++H ++K N+ +N++ ++D GL ARA G
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGL-----------ARAFGVPVRTYXHEVVTLW 167
Query: 490 YRAPEV-TDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWT 548
YRAPE+ + + A D++S G + E++T ++ G E+ L R + R T
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFR----IFRTLGT 221
Query: 549 AEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR--VIENVRPNDSENR 605
+ ++ V MPD +P P R + V P D + R
Sbjct: 222 PD--------------------EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGR 260
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/299 (20%), Positives = 116/299 (38%), Gaps = 65/299 (21%)
Query: 328 SAEVLGKGTFGMAYKAILE-DGTTVVVKRLK---DVNVGKRDFEQQMEIVGSIRHENVVE 383
E +G+GT+G+ YKA + G V +K+++ + +++ ++ + H N+V+
Sbjct: 7 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXX 443
L +++++ +V+++ M S +PL
Sbjct: 67 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL-------IKSYLFQLLQGLAFC 119
Query: 444 XXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-------------- 489
+++H ++K N+ +N++ ++D GL ARA G
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGL-----------ARAFGVPVRTYTHEVVTLW 168
Query: 490 YRAPEV-TDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWT 548
YRAPE+ + + A D++S G + E++T ++ G E+ L R
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFR----------- 215
Query: 549 AEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR--VIENVRPNDSENR 605
+ R +E+V V MPD +P P R + V P D + R
Sbjct: 216 -------IFRTLGTPDEVV------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGR 261
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/299 (20%), Positives = 116/299 (38%), Gaps = 65/299 (21%)
Query: 328 SAEVLGKGTFGMAYKAILE-DGTTVVVKRLK---DVNVGKRDFEQQMEIVGSIRHENVVE 383
E +G+GT+G+ YKA + G V +K+++ + +++ ++ + H N+V+
Sbjct: 8 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 67
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXX 443
L +++++ +V+++ M S +PL
Sbjct: 68 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL-------IKSYLFQLLQGLAFC 120
Query: 444 XXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-------------- 489
+++H ++K N+ +N++ ++D GL ARA G
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGL-----------ARAFGVPVRTYXHEVVTLW 169
Query: 490 YRAPEV-TDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWT 548
YRAPE+ + + A D++S G + E++T ++ G E+ L R
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFR----------- 216
Query: 549 AEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR--VIENVRPNDSENR 605
+ R +E+V V MPD +P P R + V P D + R
Sbjct: 217 -------IFRTLGTPDEVV------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGR 262
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/299 (20%), Positives = 116/299 (38%), Gaps = 65/299 (21%)
Query: 328 SAEVLGKGTFGMAYKAILE-DGTTVVVKRLK---DVNVGKRDFEQQMEIVGSIRHENVVE 383
E +G+GT+G+ YKA + G V +K+++ + +++ ++ + H N+V+
Sbjct: 8 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 67
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXX 443
L +++++ +V+++ M S +PL
Sbjct: 68 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL-------IKSYLFQLLQGLAFC 120
Query: 444 XXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-------------- 489
+++H ++K N+ +N++ ++D GL ARA G
Sbjct: 121 HSHRVLHRDLKPENLLINTEGAIKLADFGL-----------ARAFGVPVRTYXHEVVTLW 169
Query: 490 YRAPEV-TDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWT 548
YRAPE+ + + A D++S G + E++T ++ G E+ L R
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFR----------- 216
Query: 549 AEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR--VIENVRPNDSENR 605
+ R +E+V V MPD +P P R + V P D + R
Sbjct: 217 -------IFRTLGTPDEVV------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGR 262
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/299 (20%), Positives = 116/299 (38%), Gaps = 65/299 (21%)
Query: 328 SAEVLGKGTFGMAYKAILE-DGTTVVVKRLK---DVNVGKRDFEQQMEIVGSIRHENVVE 383
E +G+GT+G+ YKA + G V +K+++ + +++ ++ + H N+V+
Sbjct: 6 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 65
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXX 443
L +++++ +V+++ M S +PL
Sbjct: 66 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL-------IKSYLFQLLQGLAFC 118
Query: 444 XXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-------------- 489
+++H ++K N+ +N++ ++D GL ARA G
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGL-----------ARAFGVPVRTYTHEVVTLW 167
Query: 490 YRAPEV-TDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWT 548
YRAPE+ + + A D++S G + E++T ++ G E+ L R
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFR----------- 214
Query: 549 AEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR--VIENVRPNDSENR 605
+ R +E+V V MPD +P P R + V P D + R
Sbjct: 215 -------IFRTLGTPDEVV------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGR 260
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D GL T YRAPE+ + Q D
Sbjct: 143 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 202
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+LTG++
Sbjct: 203 IWSVGCIMAELLTGRT 218
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 83/203 (40%), Gaps = 19/203 (9%)
Query: 333 GKGTFGMAYKAILED-GTTVVVKR-LKDVNVGKRDFEQQMEIVGSIRHENVVELKAYYYS 390
G+GTFG + G +V +K+ ++D R+ Q M+ + + H N+V+L++Y+Y+
Sbjct: 32 GQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNREL-QIMQDLAVLHHPNIVQLQSYFYT 90
Query: 391 KDEKLM--VYDYYSLGSVSAMLHS------ERGEGRIPLDWDTXXXXXXXXXXXXXXXXX 442
E+ +Y + V LH R P+
Sbjct: 91 LGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPI----LIKVFLFQLIRSIGCLH 146
Query: 443 XXXXKLVHGNIKSSNIFLNSQQYGC-VSDLGLTTITSALAPVIARAAG--YRAPE-VTDS 498
+ H +IK N+ +N + D G S P +A YRAPE + +
Sbjct: 147 LPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGN 206
Query: 499 RKATQASDVYSFGVVLLEILTGK 521
+ T A D++S G + E++ G+
Sbjct: 207 QHYTTAVDIWSVGCIFAEMMLGE 229
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/297 (20%), Positives = 116/297 (39%), Gaps = 65/297 (21%)
Query: 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLK---DVNVGKRDFEQQMEIVGSIRHENVVELK 385
E +G+GT+G+ YKA + G V +K+++ + +++ ++ + H N+V+L
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 386 AYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXX 445
+++++ +V+++ M S +PL
Sbjct: 69 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL-------IKSYLFQLLQGLAFCHS 121
Query: 446 XKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG--------------YR 491
+++H ++K N+ +N++ ++D GL ARA G YR
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGL-----------ARAFGVPVRTYXHEVVTLWYR 170
Query: 492 APEV-TDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAE 550
APE+ + + A D++S G + E++T ++ G E+ L R
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFR------------- 215
Query: 551 VFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR--VIENVRPNDSENR 605
+ R +E+V V MPD +P P R + V P D + R
Sbjct: 216 -----IFRTLGTPDEVV------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGR 261
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D GL T YRAPE+ + Q D
Sbjct: 158 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 217
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+LTG++
Sbjct: 218 IWSVGCIMAELLTGRT 233
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D GL T YRAPE+ + Q D
Sbjct: 142 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 201
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+LTG++
Sbjct: 202 IWSVGCIMAELLTGRT 217
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 58/109 (53%), Gaps = 12/109 (11%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTI-------TSALAPVIARAAGYRAPEVT-DSR 499
++H ++K SN+ LN+ + D GL + T L +A YRAPE+ +S+
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVA-TRWYRAPEIMLNSK 207
Query: 500 KATQASDVYSFGVVLLEILTGKSPIHTTGG--DELVHLVRWVHSVVREE 546
T++ D++S G +L E+L+ + PI D+L H++ + S +E+
Sbjct: 208 GYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQED 255
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/297 (20%), Positives = 116/297 (39%), Gaps = 65/297 (21%)
Query: 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLK---DVNVGKRDFEQQMEIVGSIRHENVVELK 385
E +G+GT+G+ YKA + G V +K+++ + +++ ++ + H N+V+L
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 386 AYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXX 445
+++++ +V+++ M S +PL
Sbjct: 70 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL-------IKSYLFQLLQGLAFCHS 122
Query: 446 XKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG--------------YR 491
+++H ++K N+ +N++ ++D GL ARA G YR
Sbjct: 123 HRVLHRDLKPQNLLINTEGAIKLADFGL-----------ARAFGVPVRTYTHEVVTLWYR 171
Query: 492 APEV-TDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAE 550
APE+ + + A D++S G + E++T ++ G E+ L R
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFR------------- 216
Query: 551 VFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR--VIENVRPNDSENR 605
+ R +E+V V MPD +P P R + V P D + R
Sbjct: 217 -----IFRTLGTPDEVV------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGR 262
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 58/109 (53%), Gaps = 12/109 (11%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTI-------TSALAPVIARAAGYRAPEVT-DSR 499
++H ++K SN+ LN+ + D GL + T L +A YRAPE+ +S+
Sbjct: 150 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVA-TRWYRAPEIMLNSK 208
Query: 500 KATQASDVYSFGVVLLEILTGKSPIHTTGG--DELVHLVRWVHSVVREE 546
T++ D++S G +L E+L+ + PI D+L H++ + S +E+
Sbjct: 209 GYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQED 256
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/299 (20%), Positives = 117/299 (39%), Gaps = 65/299 (21%)
Query: 328 SAEVLGKGTFGMAYKAILE-DGTTVVVKRLK---DVNVGKRDFEQQMEIVGSIRHENVVE 383
E +G+GT+G+ YKA + G V +K+++ + +++ ++ + H N+V+
Sbjct: 6 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 65
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXX 443
L +++++ +V+++ + M S +PL
Sbjct: 66 LLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPL-------IKSYLFQLLQGLAFC 118
Query: 444 XXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-------------- 489
+++H ++K N+ +N++ ++D GL ARA G
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGL-----------ARAFGVPVRTYTHEVVTLW 167
Query: 490 YRAPEV-TDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWT 548
YRAPE+ + + A D++S G + E++T ++ G E+ L R
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFR----------- 214
Query: 549 AEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR--VIENVRPNDSENR 605
+ R +E+V V MPD +P P R + V P D + R
Sbjct: 215 -------IFRTLGTPDEVV------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGR 260
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D GL T YRAPE+ + Q D
Sbjct: 142 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 201
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+LTG++
Sbjct: 202 IWSVGCIMAELLTGRT 217
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTT--ITSALAPVIARAAGYRAPEVTDSRKATQA- 504
++H ++K SNI L+ + + D G++ + A A Y APE D T+
Sbjct: 146 VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPD 205
Query: 505 ----SDVYSFGVVLLEILTGKSPIHTTGGD 530
+DV+S G+ L+E+ TG+ P D
Sbjct: 206 YDIRADVWSLGISLVELATGQFPYKNCKTD 235
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D GL T YRAPE+ + Q D
Sbjct: 166 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATRWYRAPEIMLNWMHYNQTVD 225
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+LTG++
Sbjct: 226 IWSVGCIMAELLTGRT 241
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 86/213 (40%), Gaps = 35/213 (16%)
Query: 331 VLGKGTFGMAYKAIL--------EDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVV 382
VLGKG+FG + IL E V+ KR K ++++++ + H N+
Sbjct: 33 VLGKGSFG---EVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIX 89
Query: 383 ELKAYYYSKDEKLMVYDYYSLGS-----VSAMLHSERGEGRIPLDWDTXXXXXXXXXXXX 437
+L ++ K +V + Y+ G +S SE RI
Sbjct: 90 KLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARI-------------IRQVL 136
Query: 438 XXXXXXXXXKLVHGNIKSSNIFLNSQQYGC---VSDLGLTTITSALAPVIAR--AAGYRA 492
K+VH ++K N+ L S+ + D GL+T A + A Y A
Sbjct: 137 SGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIA 196
Query: 493 PEVTDSRKATQASDVYSFGVVLLEILTGKSPIH 525
PEV + DV+S GV+L +L+G P +
Sbjct: 197 PEVLHG-TYDEKCDVWSTGVILYILLSGCPPFN 228
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/297 (20%), Positives = 116/297 (39%), Gaps = 65/297 (21%)
Query: 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLK---DVNVGKRDFEQQMEIVGSIRHENVVELK 385
E +G+GT+G+ YKA + G V +K+++ + +++ ++ + H N+V+L
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 386 AYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXX 445
+++++ +V+++ M S +PL
Sbjct: 69 DVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL-------IKSYLFQLLQGLAFCHS 121
Query: 446 XKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG--------------YR 491
+++H ++K N+ +N++ ++D GL ARA G YR
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGL-----------ARAFGVPVRTYXHEVVTLWYR 170
Query: 492 APEV-TDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAE 550
APE+ + + A D++S G + E++T ++ G E+ L R
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFR------------- 215
Query: 551 VFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR--VIENVRPNDSENR 605
+ R +E+V V MPD +P P R + V P D + R
Sbjct: 216 -----IFRTLGTPDEVV------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGR 261
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D GL T YRAPE+ + Q D
Sbjct: 144 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 203
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+LTG++
Sbjct: 204 IWSVGCIMAELLTGRT 219
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D GL T YRAPE+ + Q D
Sbjct: 142 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 201
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+LTG++
Sbjct: 202 IWSVGCIMAELLTGRT 217
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDS-RKATQASD 506
+VH ++K N+ +N + D GL A YRAPEV S Q D
Sbjct: 147 VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVD 206
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+LTGK+
Sbjct: 207 IWSVGCIMAEMLTGKT 222
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/299 (20%), Positives = 116/299 (38%), Gaps = 65/299 (21%)
Query: 328 SAEVLGKGTFGMAYKAILE-DGTTVVVKRLK---DVNVGKRDFEQQMEIVGSIRHENVVE 383
E +G+GT+G+ YKA + G V +K+++ + +++ ++ + H N+V+
Sbjct: 6 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 65
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXX 443
L +++++ +V+++ M S +PL
Sbjct: 66 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL-------IKSYLFQLLQGLAFC 118
Query: 444 XXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-------------- 489
+++H ++K N+ +N++ ++D GL ARA G
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGL-----------ARAFGVPVRTYXHEVVTLW 167
Query: 490 YRAPEV-TDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWT 548
YRAPE+ + + A D++S G + E++T ++ G E+ L R
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFR----------- 214
Query: 549 AEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR--VIENVRPNDSENR 605
+ R +E+V V MPD +P P R + V P D + R
Sbjct: 215 -------IFRTLGTPDEVV------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGR 260
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D GL T YRAPE+ + Q D
Sbjct: 169 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATRWYRAPEIMLNWMHYNQTVD 228
Query: 507 VYSFGVVLLEILTGKSPIHTTGG-DELVHLVRWV 539
++S G ++ E+LTG++ T D+L ++R V
Sbjct: 229 IWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 262
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/297 (20%), Positives = 116/297 (39%), Gaps = 65/297 (21%)
Query: 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLK---DVNVGKRDFEQQMEIVGSIRHENVVELK 385
E +G+GT+G+ YKA + G V +K+++ + +++ ++ + H N+V+L
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 386 AYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXX 445
+++++ +V+++ M S +PL
Sbjct: 69 DVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPL-------IKSYLFQLLQGLAFCHS 121
Query: 446 XKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG--------------YR 491
+++H ++K N+ +N++ ++D GL ARA G YR
Sbjct: 122 HRVLHRDLKPENLLINTEGAIKLADFGL-----------ARAFGVPVRTYXHEVVTLWYR 170
Query: 492 APEV-TDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAE 550
APE+ + + A D++S G + E++T ++ G E+ L R
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFR------------- 215
Query: 551 VFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR--VIENVRPNDSENR 605
+ R +E+V V MPD +P P R + V P D + R
Sbjct: 216 -----IFRTLGTPDEVV------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGR 261
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITS---ALAPVIARAAGYRAPEVTDSRKATQA 504
+VH ++K NI + S ++D GL I S AL PV+ YRAPEV
Sbjct: 141 IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVV-TLWYRAPEVLLQSTYATP 199
Query: 505 SDVYSFGVVLLEILTGK 521
D++S G + E+ K
Sbjct: 200 VDMWSVGCIFAEMFRRK 216
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/299 (20%), Positives = 116/299 (38%), Gaps = 65/299 (21%)
Query: 328 SAEVLGKGTFGMAYKAILE-DGTTVVVKRLK---DVNVGKRDFEQQMEIVGSIRHENVVE 383
E +G+GT+G+ YKA + G V +K+++ + +++ ++ + H N+V+
Sbjct: 8 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 67
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXX 443
L +++++ +V+++ M S +PL
Sbjct: 68 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL-------IKSYLFQLLQGLAFC 120
Query: 444 XXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-------------- 489
+++H ++K N+ +N++ ++D GL ARA G
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGL-----------ARAFGVPVRTYXHEVVTLW 169
Query: 490 YRAPEV-TDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWT 548
YRAPE+ + + A D++S G + E++T ++ G E+ L R
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFR----------- 216
Query: 549 AEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR--VIENVRPNDSENR 605
+ R +E+V V MPD +P P R + V P D + R
Sbjct: 217 -------IFRTLGTPDEVV------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGR 262
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 77/205 (37%), Gaps = 18/205 (8%)
Query: 330 EVLGKGTFGMAYKAI-LEDGTTVVVKRLKDVNVGKRD---FEQQMEIVGSIRHENVVELK 385
E +GKG F + + + L G K + + RD E++ I ++H N+V L
Sbjct: 10 EDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLH 69
Query: 386 AYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXX 445
+ +V+D + G E E + ++ +
Sbjct: 70 DSISEEGFHYLVFDLVTGG--------ELFEDIVAREYYSEADASHCIQQILEAVLHCHQ 121
Query: 446 XKLVHGNIKSSNIFLNSQQYGC---VSDLGLTTITSALAPV---IARAAGYRAPEVTDSR 499
+VH ++K N+ L S+ G ++D GL A GY +PEV
Sbjct: 122 MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKE 181
Query: 500 KATQASDVYSFGVVLLEILTGKSPI 524
+ D+++ GV+L +L G P
Sbjct: 182 AYGKPVDIWACGVILYILLVGYPPF 206
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/205 (20%), Positives = 77/205 (37%), Gaps = 18/205 (8%)
Query: 330 EVLGKGTFGMAYKAIL----EDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELK 385
E LGKG F + + + ++ +++ K + E++ I ++H N+V L
Sbjct: 17 EELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 76
Query: 386 AYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXX 445
+ +++D + G E E + ++ +
Sbjct: 77 DSISEEGHHYLIFDLVTGG--------ELFEDIVAREYYSEADASHCIQQILEAVLHCHQ 128
Query: 446 XKLVHGNIKSSNIFLNSQQYGC---VSDLGLTTITSALAPV---IARAAGYRAPEVTDSR 499
+VH N+K N+ L S+ G ++D GL A GY +PEV
Sbjct: 129 MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKD 188
Query: 500 KATQASDVYSFGVVLLEILTGKSPI 524
+ D+++ GV+L +L G P
Sbjct: 189 PYGKPVDLWACGVILYILLVGYPPF 213
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 62/133 (46%), Gaps = 17/133 (12%)
Query: 448 LVHGNIKSSNIFL---NSQQYGCVSDLGLTTITSALAPVIAR--AAGYRAPEVTDSRKAT 502
+VH +IK NI L NS + D GL++ S + R A Y APEV +K
Sbjct: 167 IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVL-KKKYN 225
Query: 503 QASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNI 562
+ DV+S GV++ +L G P GG +++ V E FD + NI
Sbjct: 226 EKCDVWSCGVIMYILLCGYPPF---GGQNDQDIIKKV------EKGKYYFDFN--DWKNI 274
Query: 563 EEEMVEMLQIAMS 575
+E E++++ ++
Sbjct: 275 SDEAKELIKLMLT 287
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Query: 449 VHGNIKSSNIFLNSQQYGCVSDLGLTTITS-ALAPVIARAAG---YRAPEVTDSRKATQA 504
H ++K NI +++ + + D G+ + T+ + G Y APE AT
Sbjct: 156 THRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYR 215
Query: 505 SDVYSFGVVLLEILTGKSPIHTTGGDEL 532
+D+Y+ VL E LTG P GD+L
Sbjct: 216 ADIYALTCVLYECLTGSPPYQ---GDQL 240
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 95/239 (39%), Gaps = 39/239 (16%)
Query: 310 FFFEGCNYAFDLEDLLRASAE-------VLGKGTFGMAYKAI-LEDGTTV----VVKRLK 357
+F+G A + + LLR E VLG G FG YK + + +G V +K L+
Sbjct: 20 LYFQGSGEAPN-QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR 78
Query: 358 DVNVGKRDFE--QQMEIVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGSVSAML----- 410
+ K + E + ++ S+ + +V L + +L+ L +L
Sbjct: 79 EATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT----QLMPFGCLLDYVRE 134
Query: 411 HSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSD 470
H + + L+W +LVH ++ + N+ + + Q+ ++D
Sbjct: 135 HKDNIGSQYLLNW---------CVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITD 185
Query: 471 LGLTTITSALAPVIARAAG-----YRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSP 523
GL + A G + A E R T SDV+S+GV + E++T G P
Sbjct: 186 FGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 244
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 115/307 (37%), Gaps = 55/307 (17%)
Query: 321 LEDLLRASAE-----VLGKGTFGMAYKAIL--EDGT--TVVVKRLKDVNVGKRDFEQQME 371
LED+L + +LGKG FG +A L EDG+ V VK LK + D E+ +
Sbjct: 15 LEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLR 74
Query: 372 IVGSIR---HENVVELKAYYYSKDEK------LMVYDYYSLGSVSAMLHSER-GEGRIPL 421
++ H +V +L K +++ + G + A L + R GE L
Sbjct: 75 EAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNL 134
Query: 422 DWDTXXXXXXXXXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALA 481
T +H ++ + N L CV+D GL+ +
Sbjct: 135 PLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSRKIYS-G 190
Query: 482 PVIARAAGYRAP------EVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVH 534
+ + P E T SDV++FGV + EI+T G++P G E
Sbjct: 191 DYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPY---AGIE--- 244
Query: 535 LVRWVHSVVREEWTAEVFDVEL----LRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDV 590
AE+++ + L+ P E M E+ + C P QRP +
Sbjct: 245 -------------NAEIYNYLIGGNRLKQP--PECMEEVYDLMYQCWSADPKQRPSFTCL 289
Query: 591 VRVIENV 597
+EN+
Sbjct: 290 RMELENI 296
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 77/205 (37%), Gaps = 18/205 (8%)
Query: 330 EVLGKGTFGMAYKAI-LEDGTTVVVKRLKDVNVGKRD---FEQQMEIVGSIRHENVVELK 385
E LGKG F + + + + G K + + RD E++ I ++H N+V L
Sbjct: 10 EELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 69
Query: 386 AYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXX 445
+ +V+D + G E E + ++ +
Sbjct: 70 DSISEEGFHYLVFDLVTGG--------ELFEDIVAREYYSEADASHCIQQILESVNHCHL 121
Query: 446 XKLVHGNIKSSNIFLNSQQYGC---VSDLGLTTITSALAPV---IARAAGYRAPEVTDSR 499
+VH ++K N+ L S+ G ++D GL A GY +PEV
Sbjct: 122 NGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKD 181
Query: 500 KATQASDVYSFGVVLLEILTGKSPI 524
+ D+++ GV+L +L G P
Sbjct: 182 PYGKPVDMWACGVILYILLVGYPPF 206
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 77/205 (37%), Gaps = 18/205 (8%)
Query: 330 EVLGKGTFGMAYKAI-LEDGTTVVVKRLKDVNVGKRD---FEQQMEIVGSIRHENVVELK 385
E LGKG F + + + + G K + + RD E++ I ++H N+V L
Sbjct: 10 EELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 69
Query: 386 AYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXX 445
+ +V+D + G E E + ++ +
Sbjct: 70 DSISEEGFHYLVFDLVTGG--------ELFEDIVAREYYSEADASHCIQQILESVNHCHL 121
Query: 446 XKLVHGNIKSSNIFLNSQQYGC---VSDLGLTTITSALAPV---IARAAGYRAPEVTDSR 499
+VH ++K N+ L S+ G ++D GL A GY +PEV
Sbjct: 122 NGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKD 181
Query: 500 KATQASDVYSFGVVLLEILTGKSPI 524
+ D+++ GV+L +L G P
Sbjct: 182 PYGKPVDMWACGVILYILLVGYPPF 206
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D GL T YRAPE+ + Q D
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 205
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+LTG++
Sbjct: 206 IWSVGCIMAELLTGRT 221
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 91/253 (35%), Gaps = 37/253 (14%)
Query: 316 NYAF--------DLEDLLRASAEV---LGKGTFGMAYKAILE------DGTTVVVKRLKD 358
NY+F DL+++ R + + LG G FG Y+ + V VK L +
Sbjct: 12 NYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE 71
Query: 359 VNVGKRDFEQQME--IVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGE 416
V + + + ME I+ H+N+V + ++ + + G + + L R
Sbjct: 72 VCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR 131
Query: 417 GRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTI 476
P +H +I + N L G V+ +G
Sbjct: 132 PSQPSSL-AMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIG---- 186
Query: 477 TSALAPVIARAAGYR------------APEVTDSRKATQASDVYSFGVVLLEILT-GKSP 523
+A I RA+ YR PE T +D +SFGV+L EI + G P
Sbjct: 187 DFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 246
Query: 524 IHTTGGDELVHLV 536
+ E++ V
Sbjct: 247 YPSKSNQEVLEFV 259
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTI-------TSALAPVIARAAGYRAPEVT-DSR 499
++H ++K SN+ +N+ + D GL I T L +A YRAPE+ +S+
Sbjct: 165 VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVA-TRWYRAPEIMLNSK 223
Query: 500 KATQASDVYSFGVVLLEILTGK 521
T++ D++S G +L E+L+ +
Sbjct: 224 GYTKSIDIWSVGCILAEMLSNR 245
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTI----TSALAPVIARAAGYRAPEVTDSRKAT 502
+ VH +I + N+ +++ + D GL+ T A + APE + R+ T
Sbjct: 131 RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 190
Query: 503 QASDVYSFGVVLLEILT-GKSPIHTTGGDELV 533
ASDV+ FGV + EIL G P ++++
Sbjct: 191 SASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 222
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-----YRAPEVTDSRKA 501
+LVH ++ + N+ + + Q+ ++D GL + A G + A E R
Sbjct: 138 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 197
Query: 502 TQASDVYSFGVVLLEILT-GKSP 523
T SDV+S+GV + E++T G P
Sbjct: 198 THQSDVWSYGVTVWELMTFGSKP 220
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-----YRAPEVTDSRKA 501
+LVH ++ + N+ + + Q+ ++D GL + A G + A E R
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 196
Query: 502 TQASDVYSFGVVLLEILT-GKSP 523
T SDV+S+GV + E++T G P
Sbjct: 197 THQSDVWSYGVTVWELMTFGSKP 219
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-----YRAPEVTDSRKA 501
+LVH ++ + N+ + + Q+ ++D GL + A G + A E R
Sbjct: 147 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 206
Query: 502 TQASDVYSFGVVLLEILT-GKSP 523
T SDV+S+GV + E++T G P
Sbjct: 207 THQSDVWSYGVTVWELMTFGSKP 229
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 77/205 (37%), Gaps = 18/205 (8%)
Query: 330 EVLGKGTFGMAYKAILEDGTT-VVVKRLKDVNVGKRD---FEQQMEIVGSIRHENVVELK 385
E LGKG F + + + + T K + + RD E++ I ++H N+V L
Sbjct: 37 EELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 96
Query: 386 AYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXX 445
+ +V+D + G E E + ++ +
Sbjct: 97 DSISEEGFHYLVFDLVTGG--------ELFEDIVAREYYSEADASHCIHQILESVNHIHQ 148
Query: 446 XKLVHGNIKSSNIFLNSQQYGC---VSDLGLTTITSALAPV---IARAAGYRAPEVTDSR 499
+VH ++K N+ L S+ G ++D GL A GY +PEV
Sbjct: 149 HDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKD 208
Query: 500 KATQASDVYSFGVVLLEILTGKSPI 524
+ D+++ GV+L +L G P
Sbjct: 209 PYGKPVDIWACGVILYILLVGYPPF 233
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-----YRAPEVTDSRKA 501
+LVH ++ + N+ + + Q+ ++D GL + A G + A E R
Sbjct: 171 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 230
Query: 502 TQASDVYSFGVVLLEILT-GKSP 523
T SDV+S+GV + E++T G P
Sbjct: 231 THQSDVWSYGVTVWELMTFGSKP 253
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-----YRAPEVTDSRKA 501
+LVH ++ + N+ + + Q+ ++D GL + A G + A E R
Sbjct: 131 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 190
Query: 502 TQASDVYSFGVVLLEILT-GKSP 523
T SDV+S+GV + E++T G P
Sbjct: 191 THQSDVWSYGVTVWELMTFGSKP 213
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 86/212 (40%), Gaps = 31/212 (14%)
Query: 330 EVLGKGTFGMAYKAI-LEDGTTV----VVKRLKDVNVGKRDFE--QQMEIVGSIRHENVV 382
+VLG G FG YK + + +G V +K L++ K + E + ++ S+ + +V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 383 ELKAYYYSKDEKLMVYDYYSLGSVSAML-----HSERGEGRIPLDWDTXXXXXXXXXXXX 437
L + +L++ L +L H + + L+W
Sbjct: 81 RLLGICLTSTVQLIM----QLMPFGCLLDYVREHKDNIGSQYLLNW---------CVQIA 127
Query: 438 XXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-----YRA 492
+LVH ++ + N+ + + Q+ ++D GL + A G + A
Sbjct: 128 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 493 PEVTDSRKATQASDVYSFGVVLLEILT-GKSP 523
E R T SDV+S+GV + E++T G P
Sbjct: 188 LESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-----YRAPEVTDSRKA 501
+LVH ++ + N+ + + Q+ ++D GL + A G + A E R
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 196
Query: 502 TQASDVYSFGVVLLEILT-GKSP 523
T SDV+S+GV + E++T G P
Sbjct: 197 THQSDVWSYGVTVWELMTFGSKP 219
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-----YRAPEVTDSRKA 501
+LVH ++ + N+ + + Q+ ++D GL + A G + A E R
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 199
Query: 502 TQASDVYSFGVVLLEILT-GKSP 523
T SDV+S+GV + E++T G P
Sbjct: 200 THQSDVWSYGVTVWELMTFGSKP 222
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-----YRAPEVTDSRKA 501
+LVH ++ + N+ + + Q+ ++D GL + A G + A E R
Sbjct: 138 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 197
Query: 502 TQASDVYSFGVVLLEILT-GKSP 523
T SDV+S+GV + E++T G P
Sbjct: 198 THQSDVWSYGVTVWELMTFGSKP 220
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-----YRAPEVTDSRKA 501
+LVH ++ + N+ + + Q+ ++D GL + A G + A E R
Sbjct: 144 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 203
Query: 502 TQASDVYSFGVVLLEILT-GKSP 523
T SDV+S+GV + E++T G P
Sbjct: 204 THQSDVWSYGVTVWELMTFGSKP 226
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-----YRAPEVTDSRKA 501
+LVH ++ + N+ + + Q+ ++D GL + A G + A E R
Sbjct: 143 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 202
Query: 502 TQASDVYSFGVVLLEILT-GKSP 523
T SDV+S+GV + E++T G P
Sbjct: 203 THQSDVWSYGVTVWELMTFGSKP 225
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 77/205 (37%), Gaps = 18/205 (8%)
Query: 330 EVLGKGTFGMAYKAI-LEDGTTVVVKRLKDVNVGKRD---FEQQMEIVGSIRHENVVELK 385
E LGKG F + + + + G K + + RD E++ I ++H N+V L
Sbjct: 28 EELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 87
Query: 386 AYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXX 445
+ +++D + G E E + ++ +
Sbjct: 88 DSISEEGHHYLIFDLVTGG--------ELFEDIVAREYYSEADASHCIQQILEAVLHCHQ 139
Query: 446 XKLVHGNIKSSNIFLNSQQYGC---VSDLGLTTITSALAPV---IARAAGYRAPEVTDSR 499
+VH ++K N+ L S+ G ++D GL A GY +PEV
Sbjct: 140 MGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKD 199
Query: 500 KATQASDVYSFGVVLLEILTGKSPI 524
+ D+++ GV+L +L G P
Sbjct: 200 PYGKPVDLWACGVILYILLVGYPPF 224
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/299 (20%), Positives = 116/299 (38%), Gaps = 65/299 (21%)
Query: 328 SAEVLGKGTFGMAYKAILE-DGTTVVVKRLK---DVNVGKRDFEQQMEIVGSIRHENVVE 383
E +G+GT+G+ YKA + G V +K+++ + +++ ++ + H N+V+
Sbjct: 10 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 69
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXX 443
L +++++ +V+++ M S +PL
Sbjct: 70 LLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPL-------IKSYLFQLLQGLAFC 122
Query: 444 XXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-------------- 489
+++H ++K N+ +N++ ++D GL ARA G
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGL-----------ARAFGVPVRTYXHEVVTLW 171
Query: 490 YRAPEV-TDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWT 548
YRAPE+ + + A D++S G + E++T ++ G E+ L R
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFR----------- 218
Query: 549 AEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR--VIENVRPNDSENR 605
+ R +E+V V MPD +P P R + V P D + R
Sbjct: 219 -------IFRTLGTPDEVV------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGR 264
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-----YRAPEVTDSRKA 501
+LVH ++ + N+ + + Q+ ++D GL + A G + A E R
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 198
Query: 502 TQASDVYSFGVVLLEILT-GKSP 523
T SDV+S+GV + E++T G P
Sbjct: 199 THQSDVWSYGVTVWELMTFGSKP 221
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 86/212 (40%), Gaps = 31/212 (14%)
Query: 330 EVLGKGTFGMAYKAI-LEDGTTV----VVKRLKDVNVGKRDFE--QQMEIVGSIRHENVV 382
+VLG G FG YK + + +G V +K L++ K + E + ++ S+ + +V
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 383 ELKAYYYSKDEKLMVYDYYSLGSVSAML-----HSERGEGRIPLDWDTXXXXXXXXXXXX 437
L + +L++ L +L H + + L+W
Sbjct: 85 RLLGICLTSTVQLIM----QLMPFGCLLDYVREHKDNIGSQYLLNW---------CVQIA 131
Query: 438 XXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-----YRA 492
+LVH ++ + N+ + + Q+ ++D GL + A G + A
Sbjct: 132 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 191
Query: 493 PEVTDSRKATQASDVYSFGVVLLEILT-GKSP 523
E R T SDV+S+GV + E++T G P
Sbjct: 192 LESILHRIYTHQSDVWSYGVTVWELMTFGSKP 223
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-----YRAPEVTDSRKA 501
+LVH ++ + N+ + + Q+ ++D GL + A G + A E R
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 196
Query: 502 TQASDVYSFGVVLLEILT-GKSP 523
T SDV+S+GV + E++T G P
Sbjct: 197 THQSDVWSYGVTVWELMTFGSKP 219
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-----YRAPEVTDSRKA 501
+LVH ++ + N+ + + Q+ ++D GL + A G + A E R
Sbjct: 134 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 193
Query: 502 TQASDVYSFGVVLLEILT-GKSP 523
T SDV+S+GV + E++T G P
Sbjct: 194 THQSDVWSYGVTVWELMTFGSKP 216
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-----YRAPEVTDSRKA 501
+LVH ++ + N+ + + Q+ ++D GL + A G + A E R
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 199
Query: 502 TQASDVYSFGVVLLEILT-GKSP 523
T SDV+S+GV + E++T G P
Sbjct: 200 THQSDVWSYGVTVWELMTFGSKP 222
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-----YRAPEVTDSRKA 501
+LVH ++ + N+ + + Q+ ++D GL + A G + A E R
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 199
Query: 502 TQASDVYSFGVVLLEILT-GKSP 523
T SDV+S+GV + E++T G P
Sbjct: 200 THQSDVWSYGVTVWELMTFGSKP 222
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-----YRAPEVTDSRKA 501
+LVH ++ + N+ + + Q+ ++D GL + A G + A E R
Sbjct: 144 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 203
Query: 502 TQASDVYSFGVVLLEILT-GKSP 523
T SDV+S+GV + E++T G P
Sbjct: 204 THQSDVWSYGVTVWELMTFGSKP 226
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-----YRAPEVTDSRKA 501
+LVH ++ + N+ + + Q+ ++D GL + A G + A E R
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 199
Query: 502 TQASDVYSFGVVLLEILT-GKSP 523
T SDV+S+GV + E++T G P
Sbjct: 200 THQSDVWSYGVTVWELMTFGSKP 222
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-----YRAPEVTDSRKA 501
+LVH ++ + N+ + + Q+ ++D GL + A G + A E R
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 196
Query: 502 TQASDVYSFGVVLLEILT-GKSP 523
T SDV+S+GV + E++T G P
Sbjct: 197 THQSDVWSYGVTVWELMTFGSKP 219
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-----YRAPEVTDSRKA 501
+LVH ++ + N+ + + Q+ ++D GL + A G + A E R
Sbjct: 144 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 203
Query: 502 TQASDVYSFGVVLLEILT-GKSP 523
T SDV+S+GV + E++T G P
Sbjct: 204 THQSDVWSYGVTVWELMTFGSKP 226
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITS---ALAPVIARAAGYRAPEVTDSRKATQA 504
+VH ++K NI + S ++D GL I S AL PV+ YRAPEV
Sbjct: 133 IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVV-TLWYRAPEVLLQSTYATP 191
Query: 505 SDVYSFGVVLLEILTGK 521
D++S G + E+ K
Sbjct: 192 VDMWSVGCIFAEMFRRK 208
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-----YRAPEVTDSRKA 501
+LVH ++ + N+ + + Q+ ++D GL + A G + A E R
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 198
Query: 502 TQASDVYSFGVVLLEILT-GKSP 523
T SDV+S+GV + E++T G P
Sbjct: 199 THQSDVWSYGVTVWELMTFGSKP 221
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D GL T YRAPE+ + Q D
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 205
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+LTG++
Sbjct: 206 IWSVGCIMAELLTGRT 221
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITS---ALAPVIARAAGYRAPEVTDSRKATQA 504
+VH ++K NI + S ++D GL I S AL PV+ YRAPEV
Sbjct: 133 IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV-TLWYRAPEVLLQSTYATP 191
Query: 505 SDVYSFGVVLLEILTGK 521
D++S G + E+ K
Sbjct: 192 VDMWSVGCIFAEMFRRK 208
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 15/86 (17%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTI-------TSALAPVIARAAG--------YRA 492
L+H ++K SNIF V D GL T + L P+ A A Y +
Sbjct: 185 LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMS 244
Query: 493 PEVTDSRKATQASDVYSFGVVLLEIL 518
PE + D++S G++L E+L
Sbjct: 245 PEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 84/206 (40%), Gaps = 16/206 (7%)
Query: 324 LLRASAEVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRD--FEQQMEIVGSIRHENV 381
LL S +G+G+ G+ A + V ++ D+ +R ++ I+ +H NV
Sbjct: 45 LLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNV 104
Query: 382 VELKAYYYSKDEKLMVYDYYSLGSVSAMLHSER-GEGRIPLDWDTXXXXXXXXXXXXXXX 440
VE+ Y +E ++ ++ G+++ ++ R E +I
Sbjct: 105 VEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQI----------ATVCEAVLQAL 154
Query: 441 XXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG---YRAPEVTD 497
++H +IKS +I L +SD G S P G + APEV
Sbjct: 155 AYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVIS 214
Query: 498 SRKATQASDVYSFGVVLLEILTGKSP 523
D++S G++++E++ G+ P
Sbjct: 215 RSLYATEVDIWSLGIMVIEMVDGEPP 240
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGL--TTITSALAPVIARAAGYRAPEVTDSRKATQAS 505
++H ++K SNI + S + D GL T TS + YRAPEV +
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 506 DVYSFGVVLLEILTG 520
D++S GV++ E++ G
Sbjct: 207 DIWSVGVIMGEMIKG 221
>pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4
pdb|2WFH|B Chain B, The Human Slit 2 Dimerization Domain D4
Length = 193
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 120 LYLQFNNFSGTLPDFSVWKNLTIINLSDNGFNGTIPRSLSNLTQLEALYLANNSL 174
LYL N F+ + S +K+LT+I+LS+N + +S SN+TQL L L+ N L
Sbjct: 36 LYLDGNQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRL 90
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D GL T YRAPE+ + Q D
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 205
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+LTG++
Sbjct: 206 IWSVGCIMAELLTGRT 221
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG----YRAPEVTDSRKAT 502
+ VH +I + N+ +++ + D GL+ A + APE + R+ T
Sbjct: 511 RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 570
Query: 503 QASDVYSFGVVLLEILT-GKSPIHTTGGDELV 533
ASDV+ FGV + EIL G P ++++
Sbjct: 571 SASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 602
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGL--TTITSALAPVIARAAGYRAPEVTDSRKATQAS 505
++H ++K SNI + S + D GL T TS + YRAPEV +
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 506 DVYSFGVVLLEILTG 520
D++S GV++ E++ G
Sbjct: 207 DIWSVGVIMGEMIKG 221
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 71/146 (48%), Gaps = 26/146 (17%)
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG---YRAPE-VTDSRK-- 500
K++H +IK SN+ + + ++D G++ +++ G + APE ++++RK
Sbjct: 157 KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIF 216
Query: 501 ATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYP 560
+ +A DV++ GV L + G+ P + + +HS ++ + +E P
Sbjct: 217 SGKALDVWAMGVTLYCFVFGQCPF-------MDERIMCLHSKIKSQA------LEFPDQP 263
Query: 561 NIEEEMVEMLQIAMSCVVRMPDQRPK 586
+I E++ ++ + RM D+ P+
Sbjct: 264 DIAEDLKDL-------ITRMLDKNPE 282
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 14/85 (16%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-------------YRAPE 494
++H ++K SN+ +NS V D GL I A + G YRAPE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPE 192
Query: 495 VT-DSRKATQASDVYSFGVVLLEIL 518
V S K ++A DV+S G +L E+
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 89/219 (40%), Gaps = 33/219 (15%)
Query: 330 EVLGKGTFGMAYKA-ILEDGTTV--VVKRLKDV--NVGKRDFEQQMEIVGSI-RHENVVE 383
+V+G+G FG KA I +DG + +KR+K+ RDF ++E++ + H N++
Sbjct: 28 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 87
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWD-------------TXXXXX 430
L + + +Y G++ L R L+ D +
Sbjct: 88 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSR-----VLETDPAFAIANSTASTLSSQQLL 142
Query: 431 XXXXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTT-----ITSALAPVIA 485
+ +H N+ + NI + ++D GL+ + + +
Sbjct: 143 HFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPV 202
Query: 486 RAAGYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSP 523
R + A E + T SDV+S+GV+L EI++ G +P
Sbjct: 203 R---WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 238
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 36/77 (46%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDV 507
L++ ++K N+ ++ Q Y V+D G + APE+ S+ +A D
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEALAPEIILSKGYNKAVDW 221
Query: 508 YSFGVVLLEILTGKSPI 524
++ GV++ E+ G P
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 14/85 (16%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-------------YRAPE 494
++H ++K SN+ +NS V D GL I A + G YRAPE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPE 192
Query: 495 VT-DSRKATQASDVYSFGVVLLEIL 518
V S K ++A DV+S G +L E+
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 14/85 (16%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-------------YRAPE 494
++H ++K SN+ +NS V D GL I A + G YRAPE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPE 192
Query: 495 VT-DSRKATQASDVYSFGVVLLEIL 518
V S K ++A DV+S G +L E+
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 81/221 (36%), Gaps = 16/221 (7%)
Query: 332 LGKGTFGMAYKAIL------EDGTTVVVKRLKDVNVGKR--DFEQQMEIVGSIRHENVVE 383
LG+G+FGM Y+ + E T V +K + + + +F + ++ +VV
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 77
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGE--GRIPLDWDTXXXXXXXXXXXXXXXX 441
L L++ + + G + + L S R E L +
Sbjct: 78 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 137
Query: 442 XXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-----YRAPEVT 496
K VH ++ + N + + D G+T G + +PE
Sbjct: 138 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESL 197
Query: 497 DSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLV 536
T SDV+SFGVVL EI T + P ++++ V
Sbjct: 198 KDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 238
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 81/221 (36%), Gaps = 16/221 (7%)
Query: 332 LGKGTFGMAYKAIL------EDGTTVVVKRLKDVNVGKR--DFEQQMEIVGSIRHENVVE 383
LG+G+FGM Y+ + E T V +K + + + +F + ++ +VV
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGE--GRIPLDWDTXXXXXXXXXXXXXXXX 441
L L++ + + G + + L S R E L +
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 442 XXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-----YRAPEVT 496
K VH ++ + N + + D G+T G + +PE
Sbjct: 147 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESL 206
Query: 497 DSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLV 536
T SDV+SFGVVL EI T + P ++++ V
Sbjct: 207 KDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 247
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 96/226 (42%), Gaps = 33/226 (14%)
Query: 329 AEVLGKGTFGMAYKAILEDGTTVVVKRLKDVNV--------GKRDFEQQMEIVGSIRHEN 380
++LG+G++G + + D T+ + +K + G+ + +++++++ +RH+N
Sbjct: 10 GDLLGEGSYGKVKEVL--DSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKN 67
Query: 381 VVELKAYYYSKD-EKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXX 439
V++L Y+++ +K+ + Y + + ML S E R P+
Sbjct: 68 VIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVP-EKRFPV-----CQAHGYFCQLIDG 121
Query: 440 XXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIAR--------AAGYR 491
+VH +IK N+ L + +S LG + AL P A + ++
Sbjct: 122 LEYLHSQGIVHKDIKPGNLLLTTGGTLKISALG---VAEALHPFAADDTCRTSQGSPAFQ 178
Query: 492 APEVTDSRKATQA--SDVYSFGVVLLEILTGKSPIHTTGGDELVHL 535
PE+ + D++S GV L I TG P GD + L
Sbjct: 179 PPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFE---GDNIYKL 221
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 26/51 (50%)
Query: 470 DLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTG 520
D G T S I YRAPEV + +SD++SFG VL E+ TG
Sbjct: 205 DFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTG 255
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 97/227 (42%), Gaps = 19/227 (8%)
Query: 321 LEDLLRASAEVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFE--QQMEIVGSIRH 378
+EDL +G+GT+G YKA +DG LK + +++ ++ ++H
Sbjct: 18 VEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKH 77
Query: 379 ENVVELKAYYYSKDEK--LMVYDY--YSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXX 434
NV+ L+ + S ++ +++DY + L + H + P+
Sbjct: 78 PNVISLQKVFLSHADRKVWLLFDYAEHDLWHI-IKFHRASKANKKPVQLPRGMVKSLLYQ 136
Query: 435 XXXXXXXXXXXXKLVHGNIKSSNIFLNSQ--QYGCV--SDLGLTTI-TSALAPV-----I 484
++H ++K +NI + + + G V +D+G + S L P+ +
Sbjct: 137 ILDGIHYLHANW-VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPV 195
Query: 485 ARAAGYRAPE-VTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGD 530
YRAPE + +R T+A D+++ G + E+LT + H D
Sbjct: 196 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQED 242
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 10/89 (11%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG------YRAPEVTDSRKA 501
+++ +IK NI L+S + ++D GL+ +A RA Y AP++ +
Sbjct: 180 IIYRDIKLENILLDSNGHVVLTDFGLSK--EFVADETERAYDFCGTIEYMAPDIVRGGDS 237
Query: 502 --TQASDVYSFGVVLLEILTGKSPIHTTG 528
+A D +S GV++ E+LTG SP G
Sbjct: 238 GHDKAVDWWSLGVLMYELLTGASPFTVDG 266
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/223 (18%), Positives = 82/223 (36%), Gaps = 24/223 (10%)
Query: 321 LEDLLRASAEVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHEN 380
L D +E LG+G + Y+ + ++ V K+ ++ ++ + H N
Sbjct: 51 LSDFFEVESE-LGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPN 109
Query: 381 VVELKAYYYSKDEKLMVYDYYSLGS-----VSAMLHSERGEGRIPLDWDTXXXXXXXXXX 435
+++LK + + E +V + + G V +SER
Sbjct: 110 IIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAA-------------DAVKQ 156
Query: 436 XXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGC---VSDLGLTTIT--SALAPVIARAAGY 490
+VH ++K N+ + ++D GL+ I L + GY
Sbjct: 157 ILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGY 216
Query: 491 RAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELV 533
APE+ D++S G++ +L G P + GD+ +
Sbjct: 217 CAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFM 259
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 94/232 (40%), Gaps = 22/232 (9%)
Query: 330 EVLGKGTFGMAYKAILEDGTTVVV---KRLKDVNVG-KRDFEQQMEIVGSIRHENVVELK 385
E +G+GT+G +KA + +V RL D + G +++ ++ ++H+N+V L
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 386 AYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXX 445
+S D+KL + + + S G+ LD +
Sbjct: 68 DVLHS-DKKLTLVFEFCDQDLKKYFDSCNGD----LDPEI---VKSFLFQLLKGLGFCHS 119
Query: 446 XKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA-----GYRAPEVTDSRK 500
++H ++K N+ +N ++D GL PV +A YR P+V K
Sbjct: 120 RNVLHRDLKPQNLLINRNGELKLADFGLARAFG--IPVRCYSAEVVTLWYRPPDVLFGAK 177
Query: 501 ATQAS-DVYSFGVVLLEILTGKSPIHTTG--GDELVHLVRWVHSVVREEWTA 549
S D++S G + E+ P+ D+L + R + + E+W +
Sbjct: 178 LYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPS 229
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 80/197 (40%), Gaps = 13/197 (6%)
Query: 332 LGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIRHENVVELKAYY--Y 389
+GKG+FG YK I VV ++ D+ + + E + + + + + Y+ Y
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSY 86
Query: 390 SKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKLV 449
K KL + Y LG SA+ + G PL+ + +
Sbjct: 87 LKSTKLWIIMEY-LGGGSALDLLKPG----PLE---ETYIATILREILKGLDYLHSERKI 138
Query: 450 HGNIKSSNIFLNSQQYGCVSDLGLT---TITSALAPVIARAAGYRAPEVTDSRKATQASD 506
H +IK++N+ L+ Q ++D G+ T T + APEV +D
Sbjct: 139 HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKAD 198
Query: 507 VYSFGVVLLEILTGKSP 523
++S G+ +E+ G+ P
Sbjct: 199 IWSLGITAIELAKGEPP 215
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D GL YRAPE+ + Q D
Sbjct: 152 IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVD 211
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+L GK+
Sbjct: 212 IWSVGCIMAELLQGKA 227
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D GL T YRAPE+ + Q D
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 205
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+LTG++
Sbjct: 206 IWSVGCIMAELLTGRT 221
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D GL YRAPE+ + Q D
Sbjct: 152 IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVD 211
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+L GK+
Sbjct: 212 IWSVGCIMAELLQGKA 227
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 81/205 (39%), Gaps = 17/205 (8%)
Query: 331 VLGKGTFGMAYKA-ILEDGTTVVVKRLKDVNVGKRDFEQQME----IVGSIRHENVVELK 385
+LGKG+F Y+A + G V +K + + K Q+++ I ++H +++EL
Sbjct: 18 LLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELY 77
Query: 386 AYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRI-PLDWDTXXXXXXXXXXXXXXXXXXX 444
Y+ + +V + G ++ L + R+ P +
Sbjct: 78 NYFEDSNYVYLVLEMCHNGEMNRYL-----KNRVKPFSENEARHFMHQIITGMLYLHSHG 132
Query: 445 XXKLVHGNIKSSNIFLNSQQYGCVSDLGLTT---ITSALAPVIARAAGYRAPEVTDSRKA 501
++H ++ SN+ L ++D GL T + + Y +PE+
Sbjct: 133 ---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAH 189
Query: 502 TQASDVYSFGVVLLEILTGKSPIHT 526
SDV+S G + +L G+ P T
Sbjct: 190 GLESDVWSLGCMFYTLLIGRPPFDT 214
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 59/299 (19%), Positives = 115/299 (38%), Gaps = 65/299 (21%)
Query: 328 SAEVLGKGTFGMAYKAILE-DGTTVVVKRLK---DVNVGKRDFEQQMEIVGSIRHENVVE 383
E +G+GT+G+ YKA + G V + +++ + +++ ++ + H N+V+
Sbjct: 7 KVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXX 443
L +++++ +V+++ M S +PL
Sbjct: 67 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL-------IKSYLFQLLQGLAFC 119
Query: 444 XXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-------------- 489
+++H ++K N+ +N++ ++D GL ARA G
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGL-----------ARAFGVPVRTYTHEVVTLW 168
Query: 490 YRAPEV-TDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWT 548
YRAPE+ + + A D++S G + E++T ++ G E+ L R
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFR----------- 215
Query: 549 AEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR--VIENVRPNDSENR 605
+ R +E+V V MPD +P P R + V P D + R
Sbjct: 216 -------IFRTLGTPDEVV------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGR 261
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 59/299 (19%), Positives = 115/299 (38%), Gaps = 65/299 (21%)
Query: 328 SAEVLGKGTFGMAYKAILE-DGTTVVVKRLK---DVNVGKRDFEQQMEIVGSIRHENVVE 383
E +G+GT+G+ YKA + G V + +++ + +++ ++ + H N+V+
Sbjct: 6 KVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVK 65
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXX 443
L +++++ +V+++ M S +PL
Sbjct: 66 LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL-------IKSYLFQLLQGLAFC 118
Query: 444 XXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-------------- 489
+++H ++K N+ +N++ ++D GL ARA G
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGL-----------ARAFGVPVRTYTHEVVTLW 167
Query: 490 YRAPEV-TDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWT 548
YRAPE+ + + A D++S G + E++T ++ G E+ L R
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF--PGDSEIDQLFR----------- 214
Query: 549 AEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR--VIENVRPNDSENR 605
+ R +E+V V MPD +P P R + V P D + R
Sbjct: 215 -------IFRTLGTPDEVV------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGR 260
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 83/226 (36%), Gaps = 26/226 (11%)
Query: 332 LGKGTFGMAYKAIL------EDGTTVVVKRLKDVNVGKR--DFEQQMEIVGSIRHENVVE 383
LG+G+FGM Y+ + E T V +K + + + +F + ++ +VV
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGE--GRIPLDWDTXXXXXXXXXXXXXXXX 441
L L++ + + G + + L S R E L +
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 442 XXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTIT----------SALAPVIARAAGYR 491
K VH ++ + N + + D G+T L PV +
Sbjct: 153 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-----RWM 207
Query: 492 APEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLV 536
+PE T SDV+SFGVVL EI T + P ++++ V
Sbjct: 208 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 253
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 83/226 (36%), Gaps = 26/226 (11%)
Query: 332 LGKGTFGMAYKAIL------EDGTTVVVKRLKDVNVGKR--DFEQQMEIVGSIRHENVVE 383
LG+G+FGM Y+ + E T V +K + + + +F + ++ +VV
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 83
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGE--GRIPLDWDTXXXXXXXXXXXXXXXX 441
L L++ + + G + + L S R E L +
Sbjct: 84 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 143
Query: 442 XXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTIT----------SALAPVIARAAGYR 491
K VH ++ + N + + D G+T L PV +
Sbjct: 144 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-----RWM 198
Query: 492 APEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLV 536
+PE T SDV+SFGVVL EI T + P ++++ V
Sbjct: 199 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 244
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 83/226 (36%), Gaps = 26/226 (11%)
Query: 332 LGKGTFGMAYKAIL------EDGTTVVVKRLKDVNVGKR--DFEQQMEIVGSIRHENVVE 383
LG+G+FGM Y+ + E T V +K + + + +F + ++ +VV
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGE--GRIPLDWDTXXXXXXXXXXXXXXXX 441
L L++ + + G + + L S R E L +
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 442 XXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTIT----------SALAPVIARAAGYR 491
K VH ++ + N + + D G+T L PV +
Sbjct: 146 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-----RWM 200
Query: 492 APEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLV 536
+PE T SDV+SFGVVL EI T + P ++++ V
Sbjct: 201 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 246
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D GL T YRAPE+ + D
Sbjct: 175 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNMTVD 234
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+LTG++
Sbjct: 235 IWSVGCIMAELLTGRT 250
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Query: 448 LVHGNIKSSNIFLNSQQYGCV---SDLGLTTITSALA-PVIARAAGYRAPEVTDSRKATQ 503
+ H ++K N+ S++ V +D G T+ A Y APEV K +
Sbjct: 130 IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDK 189
Query: 504 ASDVYSFGVVLLEILTGKSPIHTTGGDEL 532
+ D++S GV++ +L G P ++ G +
Sbjct: 190 SCDMWSLGVIMYILLCGFPPFYSNTGQAI 218
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 83/226 (36%), Gaps = 26/226 (11%)
Query: 332 LGKGTFGMAYKAIL------EDGTTVVVKRLKDVNVGKR--DFEQQMEIVGSIRHENVVE 383
LG+G+FGM Y+ + E T V +K + + + +F + ++ +VV
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGE--GRIPLDWDTXXXXXXXXXXXXXXXX 441
L L++ + + G + + L S R E L +
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 442 XXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTIT----------SALAPVIARAAGYR 491
K VH ++ + N + + D G+T L PV +
Sbjct: 140 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-----RWM 194
Query: 492 APEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLV 536
+PE T SDV+SFGVVL EI T + P ++++ V
Sbjct: 195 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 240
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAP-----VIARAAGYRAPEVTDSRKAT 502
+++ ++K N+ L+S+ + ++D G+ L P Y APE+
Sbjct: 131 IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEILRGEDYG 188
Query: 503 QASDVYSFGVVLLEILTGKSPIHTTG 528
+ D ++ GV++ E++ G+SP G
Sbjct: 189 FSVDWWALGVLMFEMMAGRSPFDIVG 214
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D GL YRAPE+ + Q D
Sbjct: 144 IIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVD 203
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+L GK+
Sbjct: 204 IWSVGCIMAELLQGKA 219
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 83/226 (36%), Gaps = 26/226 (11%)
Query: 332 LGKGTFGMAYKAIL------EDGTTVVVKRLKDVNVGKR--DFEQQMEIVGSIRHENVVE 383
LG+G+FGM Y+ + E T V +K + + + +F + ++ +VV
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGE--GRIPLDWDTXXXXXXXXXXXXXXXX 441
L L++ + + G + + L S R E L +
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 442 XXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTIT----------SALAPVIARAAGYR 491
K VH ++ + N + + D G+T L PV +
Sbjct: 147 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-----RWM 201
Query: 492 APEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLV 536
+PE T SDV+SFGVVL EI T + P ++++ V
Sbjct: 202 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 247
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Query: 448 LVHGNIKSSNIFLNSQQYGCV---SDLGLTTITSALA-PVIARAAGYRAPEVTDSRKATQ 503
+ H ++K N+ S++ V +D G T+ A Y APEV K +
Sbjct: 149 IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDK 208
Query: 504 ASDVYSFGVVLLEILTGKSPIHTTGGDEL 532
+ D++S GV++ +L G P ++ G +
Sbjct: 209 SCDMWSLGVIMYILLCGFPPFYSNTGQAI 237
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 88/237 (37%), Gaps = 37/237 (15%)
Query: 330 EVLGKGTFGMAYKAILED-GTTVVVKRLKDVNVGKRDFEQ---QMEIVGSIRHENVVELK 385
E LG G FG + I +D G V +K+ + + ++ E+ +++I+ + H NVV +
Sbjct: 21 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQ-ELSPKNRERWCLEIQIMKKLNHPNVVSAR 79
Query: 386 ------AYYYSKDEKLMVYDYYSLGSVSAMLHSERG-----EGRIPLDWDTXXXXXXXXX 434
D L+ +Y G + L+ EG I
Sbjct: 80 EVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPI----------RTLLS 129
Query: 435 XXXXXXXXXXXXKLVHGNIKSSNIFLN---SQQYGCVSDLGLTT--ITSALAPVIARAAG 489
+++H ++K NI L + + DLG L
Sbjct: 130 DISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQ 189
Query: 490 YRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREE 546
Y APE+ + +K T D +SFG + E +TG P V+W H VRE+
Sbjct: 190 YLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNW-----QPVQW-HGKVREK 240
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 83/226 (36%), Gaps = 26/226 (11%)
Query: 332 LGKGTFGMAYKAIL------EDGTTVVVKRLKDVNVGKR--DFEQQMEIVGSIRHENVVE 383
LG+G+FGM Y+ + E T V +K + + + +F + ++ +VV
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 114
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGE--GRIPLDWDTXXXXXXXXXXXXXXXX 441
L L++ + + G + + L S R E L +
Sbjct: 115 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 174
Query: 442 XXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTIT----------SALAPVIARAAGYR 491
K VH ++ + N + + D G+T L PV +
Sbjct: 175 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-----RWM 229
Query: 492 APEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLV 536
+PE T SDV+SFGVVL EI T + P ++++ V
Sbjct: 230 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 275
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAP-----VIARAAGYRAPEVTDSRKAT 502
+++ ++K N+ L+S+ + ++D G+ L P Y APE+
Sbjct: 127 IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEILRGEDYG 184
Query: 503 QASDVYSFGVVLLEILTGKSPIHTTG 528
+ D ++ GV++ E++ G+SP G
Sbjct: 185 FSVDWWALGVLMFEMMAGRSPFDIVG 210
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 41/109 (37%), Gaps = 21/109 (19%)
Query: 447 KLVHGNIKSSNI-FLNSQ-------QYGC-----------VSDLGLTTITSALAPVIARA 487
+L H ++K NI F+NS+ C V+D G T I
Sbjct: 143 QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTIVAT 202
Query: 488 AGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLV 536
YR PEV Q DV+S G +L E G + T E HLV
Sbjct: 203 RHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE--HLV 249
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 88/237 (37%), Gaps = 37/237 (15%)
Query: 330 EVLGKGTFGMAYKAILED-GTTVVVKRLKDVNVGKRDFEQ---QMEIVGSIRHENVVELK 385
E LG G FG + I +D G V +K+ + + ++ E+ +++I+ + H NVV +
Sbjct: 20 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQ-ELSPKNRERWCLEIQIMKKLNHPNVVSAR 78
Query: 386 ------AYYYSKDEKLMVYDYYSLGSVSAMLHSERG-----EGRIPLDWDTXXXXXXXXX 434
D L+ +Y G + L+ EG I
Sbjct: 79 EVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPI----------RTLLS 128
Query: 435 XXXXXXXXXXXXKLVHGNIKSSNIFLN---SQQYGCVSDLGLTT--ITSALAPVIARAAG 489
+++H ++K NI L + + DLG L
Sbjct: 129 DISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQ 188
Query: 490 YRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREE 546
Y APE+ + +K T D +SFG + E +TG P V+W H VRE+
Sbjct: 189 YLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNW-----QPVQW-HGKVREK 239
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 83/226 (36%), Gaps = 26/226 (11%)
Query: 332 LGKGTFGMAYKAIL------EDGTTVVVKRLKDVNVGKR--DFEQQMEIVGSIRHENVVE 383
LG+G+FGM Y+ + E T V +K + + + +F + ++ +VV
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGE--GRIPLDWDTXXXXXXXXXXXXXXXX 441
L L++ + + G + + L S R E L +
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 442 XXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTIT----------SALAPVIARAAGYR 491
K VH ++ + N + + D G+T L PV +
Sbjct: 146 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-----RWM 200
Query: 492 APEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLV 536
+PE T SDV+SFGVVL EI T + P ++++ V
Sbjct: 201 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 246
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTITS---ALAPVIARAAGYRAPEVTDSRKATQ 503
++VH ++K NI + S ++D GL I S AL V+ YRAPEV
Sbjct: 140 RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV-TLWYRAPEVLLQSSYAT 198
Query: 504 ASDVYSFGVVLLEILTGK 521
D++S G + E+ K
Sbjct: 199 PVDLWSVGCIFAEMFRRK 216
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAP-----VIARAAGYRAPEVTDSRKAT 502
+++ ++K N+ L+S+ + ++D G+ L P Y APE+
Sbjct: 174 IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSTFCGTPNYIAPEILRGEDYG 231
Query: 503 QASDVYSFGVVLLEILTGKSPIHTTG 528
+ D ++ GV++ E++ G+SP G
Sbjct: 232 FSVDWWALGVLMFEMMAGRSPFDIVG 257
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 41/109 (37%), Gaps = 21/109 (19%)
Query: 447 KLVHGNIKSSNI-FLNSQ-------QYGC-----------VSDLGLTTITSALAPVIARA 487
+L H ++K NI F+NS+ C V+D G T I
Sbjct: 152 QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTIVAT 211
Query: 488 AGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLV 536
YR PEV Q DV+S G +L E G + T E HLV
Sbjct: 212 RHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE--HLV 258
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 35/104 (33%), Gaps = 19/104 (18%)
Query: 447 KLVHGNIKSSNIFLNSQQYGC-------------------VSDLGLTTITSALAPVIARA 487
KL H ++K NI + Y V D G T I
Sbjct: 157 KLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSATFDHEHHSTIVST 216
Query: 488 AGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDE 531
YRAPEV +Q DV+S G ++ E G + T E
Sbjct: 217 RHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNRE 260
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 489 GYRAPEV-TDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGD 530
G+RAPEV T T A D++S GV+ L +L+G+ P + D
Sbjct: 211 GFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDD 253
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 83/212 (39%), Gaps = 19/212 (8%)
Query: 330 EVLGKGTFGMAYKA--ILEDGTTVVVKRLKDVNVGKRDFEQ---QMEIVGSIRHENVVEL 384
+ +GKG F A IL G V VK + + ++ ++ I+ + H N+V+L
Sbjct: 13 KTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 71
Query: 385 KAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXX 444
++ +V +Y S G V L + W
Sbjct: 72 FEVIETEKTLYLVMEYASGGEVFDYL--------VAHGWMKEKEARAKFRQIVSAVQYCH 123
Query: 445 XXKLVHGNIKSSNIFLNSQQYGCVSDLGLT---TITSALAPVIARAAGYRAPEVTDSRKA 501
+VH ++K+ N+ L++ ++D G + T + L + Y APE+ +K
Sbjct: 124 QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCG-SPPYAAPELFQGKKY 182
Query: 502 TQAS-DVYSFGVVLLEILTGKSPIHTTGGDEL 532
DV+S GV+L +++G P EL
Sbjct: 183 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKEL 214
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/84 (22%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG---YRAPEVTDSRKATQA 504
+++ ++K N+ L+S+ + ++D G+ + G Y APE+ +
Sbjct: 142 IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFS 201
Query: 505 SDVYSFGVVLLEILTGKSPIHTTG 528
D ++ GV++ E++ G+SP G
Sbjct: 202 VDWWALGVLMFEMMAGRSPFDIVG 225
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAP------EVTDSRK 500
+LVH ++ + N+ + S + ++D GL + + A G + P E R+
Sbjct: 139 RLVHRDLAARNVLVKSPNHVKITDFGLARLLD-IDETEYHADGGKVPIKWMALESILRRR 197
Query: 501 ATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLV 536
T SDV+S+GV + E++T G P E+ L+
Sbjct: 198 FTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLL 234
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTITS---ALAPVIARAAGYRAPEVTDSRKATQ 503
++VH ++K NI + S ++D GL I S AL V+ YRAPEV
Sbjct: 140 RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV-TLWYRAPEVLLQSSYAT 198
Query: 504 ASDVYSFGVVLLEILTGK 521
D++S G + E+ K
Sbjct: 199 PVDLWSVGCIFAEMFRRK 216
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTITS---ALAPVIARAAGYRAPEVTDSRKATQ 503
++VH ++K NI + S ++D GL I S AL V+ YRAPEV
Sbjct: 140 RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV-TLWYRAPEVLLQSSYAT 198
Query: 504 ASDVYSFGVVLLEILTGK 521
D++S G + E+ K
Sbjct: 199 PVDLWSVGCIFAEMFRRK 216
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 86/212 (40%), Gaps = 19/212 (8%)
Query: 330 EVLGKGTFGMAYKA--ILEDGTTVVVKRLKDVNVGKRDFEQ---QMEIVGSIRHENVVEL 384
+ +GKG F A IL G V +K + + ++ ++ I+ + H N+V+L
Sbjct: 21 KTIGKGNFAKVKLARHIL-TGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKL 79
Query: 385 KAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXX 444
++ ++ +Y S G V L + GR+
Sbjct: 80 FEVIETEKTLYLIMEYASGGEVFDYLVAH---GRM-----KEKEARSKFRQIVSAVQYCH 131
Query: 445 XXKLVHGNIKSSNIFLNSQQYGCVSDLGLT---TITSALAPVIARAAGYRAPEVTDSRKA 501
++VH ++K+ N+ L++ ++D G + T+ L A Y APE+ +K
Sbjct: 132 QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCG-APPYAAPELFQGKKY 190
Query: 502 TQAS-DVYSFGVVLLEILTGKSPIHTTGGDEL 532
DV+S GV+L +++G P EL
Sbjct: 191 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKEL 222
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGL--TTITSALAPVIARAAGYRAPEVTDSRKATQAS 505
++H ++K SNI + S + D GL T TS + YRAPEV +
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 506 DVYSFGVVLLEILTG 520
D++S G ++ E++ G
Sbjct: 207 DIWSVGCIMGEMIKG 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGL--TTITSALAPVIARAAGYRAPEVTDSRKATQAS 505
++H ++K SNI + S + D GL T TS + YRAPEV +
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 506 DVYSFGVVLLEILTG 520
D++S G ++ E++ G
Sbjct: 207 DIWSVGCIMGEMIKG 221
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGL--TTITSALAPVIARAAGYRAPEVTDSRKATQAS 505
++H ++K SNI + S + D GL T TS + YRAPEV +
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 506 DVYSFGVVLLEILTG 520
D++S G ++ E++ G
Sbjct: 207 DIWSVGCIMGEMIKG 221
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 41/109 (37%), Gaps = 21/109 (19%)
Query: 447 KLVHGNIKSSNI-FLNSQ-------QYGC-----------VSDLGLTTITSALAPVIARA 487
+L H ++K NI F+NS+ C V+D G T I
Sbjct: 175 QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTIVAT 234
Query: 488 AGYRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLV 536
YR PEV Q DV+S G +L E G + T E HLV
Sbjct: 235 RHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE--HLV 281
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 85/212 (40%), Gaps = 31/212 (14%)
Query: 330 EVLGKGTFGMAYKAI-LEDGTTV----VVKRLKDVNVGKRDFE--QQMEIVGSIRHENVV 382
+VLG G FG YK + + +G V +K L++ K + E + ++ S+ + +V
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 383 ELKAYYYSKDEKLMVYDYYSLGSVSAML-----HSERGEGRIPLDWDTXXXXXXXXXXXX 437
L + +L++ L +L H + + L+W
Sbjct: 85 RLLGICLTSTVQLIM----QLMPFGCLLDYVREHKDNIGSQYLLNW---------CVQIA 131
Query: 438 XXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-----YRA 492
+LVH ++ + N+ + + Q+ ++D G + A G + A
Sbjct: 132 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 191
Query: 493 PEVTDSRKATQASDVYSFGVVLLEILT-GKSP 523
E R T SDV+S+GV + E++T G P
Sbjct: 192 LESILHRIYTHQSDVWSYGVTVWELMTFGSKP 223
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + GL T YRAPE+ + Q D
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 205
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+LTG++
Sbjct: 206 IWSVGCIMAELLTGRT 221
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-----YRAPEVTDSRKA 501
+LVH ++ + N+ + + Q+ ++D G + A G + A E R
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 198
Query: 502 TQASDVYSFGVVLLEILT-GKSP 523
T SDV+S+GV + E++T G P
Sbjct: 199 THQSDVWSYGVTVWELMTFGSKP 221
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 89/219 (40%), Gaps = 33/219 (15%)
Query: 330 EVLGKGTFGMAYKA-ILEDGTTV--VVKRLKDV--NVGKRDFEQQMEIVGSI-RHENVVE 383
+V+G+G FG KA I +DG + +KR+K+ RDF ++E++ + H N++
Sbjct: 21 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 80
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWD-------------TXXXXX 430
L + + +Y G++ L R L+ D +
Sbjct: 81 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSR-----VLETDPAFAIANSTASTLSSQQLL 135
Query: 431 XXXXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTT-----ITSALAPVIA 485
+ +H ++ + NI + ++D GL+ + + +
Sbjct: 136 HFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPV 195
Query: 486 RAAGYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSP 523
R + A E + T SDV+S+GV+L EI++ G +P
Sbjct: 196 R---WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 231
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 448 LVHGNIKSSNIFLNSQQYGCV---SDLGLTTITSALAPVI--ARAAGYRAPEVTDSRKAT 502
+ H ++K N+ S++ + +D G T++ + Y APEV K
Sbjct: 142 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD 201
Query: 503 QASDVYSFGVVLLEILTGKSPIHTTGG 529
++ D++S GV++ +L G P ++ G
Sbjct: 202 KSCDMWSLGVIMYILLCGYPPFYSNHG 228
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-----YRAPEVTDSRKA 501
+LVH ++ + N+ + + Q+ ++D G + A G + A E R
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 196
Query: 502 TQASDVYSFGVVLLEILT-GKSP 523
T SDV+S+GV + E++T G P
Sbjct: 197 THQSDVWSYGVTVWELMTFGSKP 219
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 89/219 (40%), Gaps = 33/219 (15%)
Query: 330 EVLGKGTFGMAYKA-ILEDGTTV--VVKRLKDV--NVGKRDFEQQMEIVGSI-RHENVVE 383
+V+G+G FG KA I +DG + +KR+K+ RDF ++E++ + H N++
Sbjct: 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 90
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWD-------------TXXXXX 430
L + + +Y G++ L R L+ D +
Sbjct: 91 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSR-----VLETDPAFAIANSTASTLSSQQLL 145
Query: 431 XXXXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTT-----ITSALAPVIA 485
+ +H ++ + NI + ++D GL+ + + +
Sbjct: 146 HFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPV 205
Query: 486 RAAGYRAPEVTDSRKATQASDVYSFGVVLLEILT-GKSP 523
R + A E + T SDV+S+GV+L EI++ G +P
Sbjct: 206 R---WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 241
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-----YRAPEVTDSRKA 501
+LVH ++ + N+ + + Q+ ++D G + A G + A E R
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 198
Query: 502 TQASDVYSFGVVLLEILT-GKSP 523
T SDV+S+GV + E++T G P
Sbjct: 199 THQSDVWSYGVTVWELMTFGSKP 221
>pdb|4ECN|A Chain A, Crystal Structure Of A Leucine-Rich Repeat Protein
(Bt_0210) From Bacteroides Thetaiotaomicron Vpi-5482 At
2.80 A Resolution
Length = 876
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 35 VNNLPHSRSLNWNESTSVCNHWTGVKCSEDGKRVVAVRLPGVGFSGLIPPNTISRLSALK 94
+NN HS + N+N+ GV +G RV + L G G G + P+ I +L+ LK
Sbjct: 293 INNTIHSLNWNFNKELDXWGDQPGVDLDNNG-RVTGLSLAGFGAKGRV-PDAIGQLTELK 350
Query: 95 ILSL--RSNVITGYFPSD 110
+LS S ++G D
Sbjct: 351 VLSFGTHSETVSGRLFGD 368
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 448 LVHGNIKSSNIFLNSQQYGCV---SDLGLTTITSALAPVI--ARAAGYRAPEVTDSRKAT 502
+ H ++K N+ S++ + +D G T++ + Y APEV K
Sbjct: 136 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPEVLGPEKYD 195
Query: 503 QASDVYSFGVVLLEILTGKSPIHTTGG 529
++ D++S GV++ +L G P ++ G
Sbjct: 196 KSCDMWSLGVIMYILLCGYPPFYSNHG 222
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 448 LVHGNIKSSNIFLNSQQYGCV---SDLGLTTITSALAPVI--ARAAGYRAPEVTDSRKAT 502
+ H ++K N+ S++ + +D G T++ + Y APEV K
Sbjct: 143 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD 202
Query: 503 QASDVYSFGVVLLEILTGKSPIHTTGG 529
++ D++S GV++ +L G P ++ G
Sbjct: 203 KSCDMWSLGVIMYILLCGYPPFYSNHG 229
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-----YRAPEVTDSRKA 501
+LVH ++ + N+ + + Q+ ++D G + A G + A E R
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 198
Query: 502 TQASDVYSFGVVLLEILT-GKSP 523
T SDV+S+GV + E++T G P
Sbjct: 199 THQSDVWSYGVTVWELMTFGSKP 221
>pdb|3RFJ|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 279
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Query: 82 IPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLPD--FSVWKN 139
+P +L+ LK L L N + F L +L YLYL N +LP F N
Sbjct: 100 LPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLYLYHNQLQ-SLPKGVFDKLTN 158
Query: 140 LTIINLSDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPD 180
LT ++L +N LTQL+ L L +N L +PD
Sbjct: 159 LTRLDLDNNQLQSLPEGVFDKLTQLKQLSLNDNQLKS-VPD 198
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYRAPEVT-DSRKATQASD 506
++H ++K SN+ +N + D L T YRAPE+ + Q D
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVD 205
Query: 507 VYSFGVVLLEILTGKS 522
++S G ++ E+LTG++
Sbjct: 206 IWSVGCIMAELLTGRT 221
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 448 LVHGNIKSSNIFLNSQQYGCV---SDLGLTTITSALAPVI--ARAAGYRAPEVTDSRKAT 502
+ H ++K N+ S++ + +D G T++ + Y APEV K
Sbjct: 137 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD 196
Query: 503 QASDVYSFGVVLLEILTGKSPIHTTGG 529
++ D++S GV++ +L G P ++ G
Sbjct: 197 KSCDMWSLGVIMYILLCGYPPFYSNHG 223
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-----YRAPEVTDSRKA 501
+LVH ++ + N+ + + Q+ ++D G + A G + A E R
Sbjct: 144 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 203
Query: 502 TQASDVYSFGVVLLEILT-GKSP 523
T SDV+S+GV + E++T G P
Sbjct: 204 THQSDVWSYGVTVWELMTFGSKP 226
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 448 LVHGNIKSSNIFLNSQQYGCV---SDLGLTTITSALAPVI--ARAAGYRAPEVTDSRKAT 502
+ H ++K N+ S++ + +D G T++ + Y APEV K
Sbjct: 136 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD 195
Query: 503 QASDVYSFGVVLLEILTGKSPIHTTGG 529
++ D++S GV++ +L G P ++ G
Sbjct: 196 KSCDMWSLGVIMYILLCGYPPFYSNHG 222
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 448 LVHGNIKSSNIFLNSQQYGCV---SDLGLTTITSALAPVI--ARAAGYRAPEVTDSRKAT 502
+ H ++K N+ S++ + +D G T++ + Y APEV K
Sbjct: 138 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD 197
Query: 503 QASDVYSFGVVLLEILTGKSPIHTTGG 529
++ D++S GV++ +L G P ++ G
Sbjct: 198 KSCDMWSLGVIMYILLCGYPPFYSNHG 224
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 448 LVHGNIKSSNIFLNSQQYGCV---SDLGLTTITSALAPVI--ARAAGYRAPEVTDSRKAT 502
+ H ++K N+ S++ + +D G T++ + Y APEV K
Sbjct: 138 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD 197
Query: 503 QASDVYSFGVVLLEILTGKSPIHTTGG 529
++ D++S GV++ +L G P ++ G
Sbjct: 198 KSCDMWSLGVIMYILLCGYPPFYSNHG 224
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 448 LVHGNIKSSNIFLNSQQYGCV---SDLGLTTITSALAPVI--ARAAGYRAPEVTDSRKAT 502
+ H ++K N+ S++ + +D G T++ + Y APEV K
Sbjct: 144 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD 203
Query: 503 QASDVYSFGVVLLEILTGKSPIHTTGG 529
++ D++S GV++ +L G P ++ G
Sbjct: 204 KSCDMWSLGVIMYILLCGYPPFYSNHG 230
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 83/226 (36%), Gaps = 26/226 (11%)
Query: 332 LGKGTFGMAYKAIL------EDGTTVVVKRLKDVNVGKR--DFEQQMEIVGSIRHENVVE 383
LG+G+FGM Y+ + E T V +K + + + +F + ++ +VV
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGE--GRIPLDWDTXXXXXXXXXXXXXXXX 441
L L++ + + G + + L S R E L +
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 442 XXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTIT----------SALAPVIARAAGYR 491
K VH ++ + N + + D G+T L PV +
Sbjct: 140 YLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-----RWM 194
Query: 492 APEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLV 536
+PE T SDV+SFGVVL EI T + P ++++ V
Sbjct: 195 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 240
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGL--TTITSALAPVIARAAGYRAPEVTDSRKATQAS 505
++H ++K SNI + S + D GL T TS + YRAPEV +
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 506 DVYSFGVVLLEILTG 520
D++S G ++ E++ G
Sbjct: 207 DIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGL--TTITSALAPVIARAAGYRAPEVTDSRKATQAS 505
++H ++K SNI + S + D GL T TS + YRAPEV +
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 207
Query: 506 DVYSFGVVLLEILTG 520
D++S G ++ E++ G
Sbjct: 208 DIWSVGCIMGEMIKG 222
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 448 LVHGNIKSSNIFLNSQQYGCV---SDLGLTTITSALAPVI--ARAAGYRAPEVTDSRKAT 502
+ H ++K N+ S++ + +D G T++ + Y APEV K
Sbjct: 182 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD 241
Query: 503 QASDVYSFGVVLLEILTGKSPIHTTGG 529
++ D++S GV++ +L G P ++ G
Sbjct: 242 KSCDMWSLGVIMYILLCGYPPFYSNHG 268
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGL--TTITSALAPVIARAAGYRAPEVTDSRKATQAS 505
++H ++K SNI + S + D GL T TS + YRAPEV +
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 506 DVYSFGVVLLEILTG 520
D++S G ++ E++ G
Sbjct: 207 DIWSVGCIMGEMIKG 221
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGL--TTITSALAPVIARAAGYRAPEVTDSRKATQAS 505
++H ++K SNI + S + D GL T TS + YRAPEV +
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 506 DVYSFGVVLLEILTG 520
D++S G ++ E++ G
Sbjct: 207 DIWSVGCIMGEMIKG 221
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 61/153 (39%), Gaps = 22/153 (14%)
Query: 449 VHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-----YRAPEVTDSRKATQ 503
+H ++ + NI L + + D GL + + + + APE + T
Sbjct: 167 IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTF 226
Query: 504 ASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNI 562
SDV+S+G+ L E+ + G SP D + +++E R +
Sbjct: 227 ESDVWSYGIFLWELFSLGSSPYPGMPVDSK------FYKMIKEG----------FRMLSP 270
Query: 563 EEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIE 595
E EM I +C P +RP +V++IE
Sbjct: 271 EHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 303
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 448 LVHGNIKSSNIFLNSQQYGCV---SDLGLTTITSALAPVI--ARAAGYRAPEVTDSRKAT 502
+ H ++K N+ S++ + +D G T++ + Y APEV K
Sbjct: 188 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD 247
Query: 503 QASDVYSFGVVLLEILTGKSPIHTTGG 529
++ D++S GV++ +L G P ++ G
Sbjct: 248 KSCDMWSLGVIMYILLCGYPPFYSNHG 274
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 61/153 (39%), Gaps = 22/153 (14%)
Query: 449 VHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-----YRAPEVTDSRKATQ 503
+H ++ + NI L + + D GL + + + + APE + T
Sbjct: 185 IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTF 244
Query: 504 ASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNI 562
SDV+S+G+ L E+ + G SP D + +++E R +
Sbjct: 245 ESDVWSYGIFLWELFSLGSSPYPGMPVDSK------FYKMIKEG----------FRMLSP 288
Query: 563 EEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIE 595
E EM I +C P +RP +V++IE
Sbjct: 289 EHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 321
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGL--TTITSALAPVIARAAGYRAPEVTDSRKATQAS 505
++H ++K SNI + S + D GL T TS + YRAPEV +
Sbjct: 149 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRYYRAPEVILGMGYKENV 208
Query: 506 DVYSFGVVLLEILTG 520
D++S G ++ E++ G
Sbjct: 209 DIWSVGCIMGEMIKG 223
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 13/83 (15%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGL-----TTITSALAPVIARAAG--YRAPEVTD--- 497
+ H ++KS NI + C++DLGL + P R Y PEV D
Sbjct: 163 IAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESL 222
Query: 498 SRKATQA---SDVYSFGVVLLEI 517
+R Q+ +D+YSFG++L E+
Sbjct: 223 NRNHFQSYIMADMYSFGLILWEV 245
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 61/153 (39%), Gaps = 22/153 (14%)
Query: 449 VHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-----YRAPEVTDSRKATQ 503
+H ++ + NI L + + D GL + + + + APE + T
Sbjct: 190 IHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTF 249
Query: 504 ASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNI 562
SDV+S+G+ L E+ + G SP D + +++E R +
Sbjct: 250 ESDVWSYGIFLWELFSLGSSPYPGMPVDSK------FYKMIKEG----------FRMLSP 293
Query: 563 EEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIE 595
E EM I +C P +RP +V++IE
Sbjct: 294 EHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 326
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 79/231 (34%), Gaps = 43/231 (18%)
Query: 323 DLLRASAEV---LGKGTFGMAYKAILED--GTTVVVKRLKDVNVGKRDFEQQMEIVGSIR 377
D+L A E+ LG+G FG + I G V VK +K+V+ R E + +
Sbjct: 10 DVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD---RYCEAARSEIQVLE 66
Query: 378 HENV---------VELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXX 428
H N V++ ++ +V++ L + + + G +P D
Sbjct: 67 HLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFI----KENGFLPFRLD---H 119
Query: 429 XXXXXXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYG-------------------CVS 469
KL H ++K NI Y V
Sbjct: 120 IRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVV 179
Query: 470 DLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTG 520
D G T + YRAPEV + +Q DV+S G +L+E G
Sbjct: 180 DFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLG 230
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 448 LVHGNIKSSNIFLNSQQYGCV---SDLGLTTITSALAPVI--ARAAGYRAPEVTDSRKAT 502
+ H ++K N+ S++ + +D G T++ + Y APEV K
Sbjct: 152 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD 211
Query: 503 QASDVYSFGVVLLEILTGKSPIHTTGG 529
++ D++S GV++ +L G P ++ G
Sbjct: 212 KSCDMWSLGVIMYILLCGYPPFYSNHG 238
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 61/153 (39%), Gaps = 22/153 (14%)
Query: 449 VHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-----YRAPEVTDSRKATQ 503
+H ++ + NI L + + D GL + + + + APE + T
Sbjct: 190 IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTF 249
Query: 504 ASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNI 562
SDV+S+G+ L E+ + G SP D + +++E R +
Sbjct: 250 ESDVWSYGIFLWELFSLGSSPYPGMPVDSK------FYKMIKEG----------FRMLSP 293
Query: 563 EEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIE 595
E EM I +C P +RP +V++IE
Sbjct: 294 EHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 326
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 79/231 (34%), Gaps = 43/231 (18%)
Query: 323 DLLRASAEV---LGKGTFGMAYKAILED--GTTVVVKRLKDVNVGKRDFEQQMEIVGSIR 377
D+L A E+ LG+G FG + I G V VK +K+V+ R E + +
Sbjct: 10 DVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD---RYCEAARSEIQVLE 66
Query: 378 HENV---------VELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXX 428
H N V++ ++ +V++ L + + + G +P D
Sbjct: 67 HLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFI----KENGFLPFRLD---H 119
Query: 429 XXXXXXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYG-------------------CVS 469
KL H ++K NI Y V
Sbjct: 120 IRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVV 179
Query: 470 DLGLTTITSALAPVIARAAGYRAPEVTDSRKATQASDVYSFGVVLLEILTG 520
D G T + YRAPEV + +Q DV+S G +L+E G
Sbjct: 180 DFGSATYDDEHHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLG 230
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 94/232 (40%), Gaps = 22/232 (9%)
Query: 330 EVLGKGTFGMAYKAILEDGTTVVV---KRLKDVNVG-KRDFEQQMEIVGSIRHENVVELK 385
E +G+GT+G +KA + +V RL D + G +++ ++ ++H+N+V L
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 386 AYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXX 445
+S D+KL + + + S G+ LD +
Sbjct: 68 DVLHS-DKKLTLVFEFCDQDLKKYFDSCNGD----LDPEI---VKSFLFQLLKGLGFCHS 119
Query: 446 XKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA-----GYRAPEVTDSRK 500
++H ++K N+ +N +++ GL PV +A YR P+V K
Sbjct: 120 RNVLHRDLKPQNLLINRNGELKLANFGLARAFG--IPVRCYSAEVVTLWYRPPDVLFGAK 177
Query: 501 ATQAS-DVYSFGVVLLEILTGKSPIHTTG--GDELVHLVRWVHSVVREEWTA 549
S D++S G + E+ P+ D+L + R + + E+W +
Sbjct: 178 LYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPS 229
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 61/153 (39%), Gaps = 22/153 (14%)
Query: 449 VHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-----YRAPEVTDSRKATQ 503
+H ++ + NI L + + D GL + + + + APE + T
Sbjct: 183 IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTF 242
Query: 504 ASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNI 562
SDV+S+G+ L E+ + G SP D + +++E R +
Sbjct: 243 ESDVWSYGIFLWELFSLGSSPYPGMPVDSK------FYKMIKEG----------FRMLSP 286
Query: 563 EEEMVEMLQIAMSCVVRMPDQRPKMPDVVRVIE 595
E EM I +C P +RP +V++IE
Sbjct: 287 EHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 319
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 85/212 (40%), Gaps = 19/212 (8%)
Query: 330 EVLGKGTFGMAYKA--ILEDGTTVVVKRLKDVNVGKRDFEQ---QMEIVGSIRHENVVEL 384
+ +GKG F A IL G V VK + + ++ ++ I+ + H N+V+L
Sbjct: 20 KTIGKGNFAKVKLARHIL-TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 385 KAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXX 444
++ +V +Y S G V L + GR+
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAH---GRM-----KEKEARAKFRQIVSAVQYCH 130
Query: 445 XXKLVHGNIKSSNIFLNSQQYGCVSDLGLT---TITSALAPVIARAAGYRAPEVTDSRKA 501
+VH ++K+ N+ L++ ++D G + T + L A Y APE+ +K
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCG-APPYAAPELFQGKKY 189
Query: 502 TQAS-DVYSFGVVLLEILTGKSPIHTTGGDEL 532
DV+S GV+L +++G P EL
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKEL 221
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 77/213 (36%), Gaps = 22/213 (10%)
Query: 329 AEVLGKGTFGMAYKAIL-----EDGT-TVVVKRLKDVNVG--KRDFEQQMEIVGSI-RHE 379
+ LG G FG +A ED V VK LK K +++I+ + +HE
Sbjct: 51 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE 110
Query: 380 NVVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEG--------RIPLDWDTXXXXXX 431
N+V L L++ +Y G + L +R G P + +
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLH 170
Query: 432 XXXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG-- 489
+H ++ + N+ L + + D GL + I +
Sbjct: 171 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 230
Query: 490 ---YRAPEVTDSRKATQASDVYSFGVVLLEILT 519
+ APE T SDV+S+G++L EI +
Sbjct: 231 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 36.2 bits (82), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 11/95 (11%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSA---LAP-VIARAAGYRAPEVTDSRKATQ 503
++H ++K SNI + S + D GL S + P V+ R YRAPEV +
Sbjct: 145 IIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTRY--YRAPEVILGMGYKE 202
Query: 504 ASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRW 538
D++S G ++ E++ G T H+ +W
Sbjct: 203 NVDIWSVGCIMGELVKGSVIFQGTD-----HIDQW 232
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 83/226 (36%), Gaps = 26/226 (11%)
Query: 332 LGKGTFGMAYKAIL------EDGTTVVVKRLKDVNVGKR--DFEQQMEIVGSIRHENVVE 383
LG+G+FGM Y+ + E T V +K + + + +F + ++ +VV
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSER-GEGRIP-LDWDTXXXXXXXXXXXXXXXX 441
L L++ + + G + + L S R P L +
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 442 XXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTIT----------SALAPVIARAAGYR 491
K VH ++ + N + + D G+T L PV +
Sbjct: 153 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-----RWM 207
Query: 492 APEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLV 536
+PE T SDV+SFGVVL EI T + P ++++ V
Sbjct: 208 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 253
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSA---LAPVIARAAGYRAPEVTDSRKATQA 504
+++ ++K N+ L+ +SDLGL A A G+ APE+ + +
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFS 369
Query: 505 SDVYSFGVVLLEILTGKSPIHTTG 528
D ++ GV L E++ + P G
Sbjct: 370 VDYFALGVTLYEMIAARGPFRARG 393
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSA---LAPVIARAAGYRAPEVTDSRKATQA 504
+++ ++K N+ L+ +SDLGL A A G+ APE+ + +
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFS 369
Query: 505 SDVYSFGVVLLEILTGKSPIHTTG 528
D ++ GV L E++ + P G
Sbjct: 370 VDYFALGVTLYEMIAARGPFRARG 393
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGL--TTITSALAPVIARAAGYRAPEVTDSRKATQAS 505
++H ++K SNI + S + D GL T TS + YRAPEV +
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRYYRAPEVILGMGYKENV 206
Query: 506 DVYSFGVVLLEILTG 520
D++S G ++ E++ G
Sbjct: 207 DIWSVGCIMGEMIKG 221
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGL--TTITSALAPVIARAAGYRAPEVTDSRKATQAS 505
++H ++K SNI + S + D GL T TS + YRAPEV +
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 506 DVYSFGVVLLEILTGK 521
D++S G ++ E++ K
Sbjct: 207 DIWSVGCIMGEMVRHK 222
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSA---LAPVIARAAGYRAPEVTDSRKATQA 504
+++ ++K N+ L+ +SDLGL A A G+ APE+ + +
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFS 369
Query: 505 SDVYSFGVVLLEILTGKSPIHTTG 528
D ++ GV L E++ + P G
Sbjct: 370 VDYFALGVTLYEMIAARGPFRARG 393
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSA---LAPVIARAAGYRAPEVTDSRKATQA 504
+++ ++K N+ L+ +SDLGL A A G+ APE+ + +
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFS 369
Query: 505 SDVYSFGVVLLEILTGKSPIHTTG 528
D ++ GV L E++ + P G
Sbjct: 370 VDYFALGVTLYEMIAARGPFRARG 393
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGL--TTITSALAPVIARAAGYRAPEVTDSRKATQAS 505
++H ++K SNI + S + D GL T TS + YRAPEV +
Sbjct: 140 IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 199
Query: 506 DVYSFGVVLLEILTGK 521
D++S G ++ E++ K
Sbjct: 200 DIWSVGCIMGEMVRHK 215
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGL--TTITSALAPVIARAAGYRAPEVTDSRKATQAS 505
++H ++K SNI + S + D GL T TS + YRAPEV +
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 506 DVYSFGVVLLEILTGK 521
D++S G ++ E++ K
Sbjct: 207 DIWSVGCIMGEMVRHK 222
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGL--TTITSALAPVIARAAGYRAPEVTDSRKATQAS 505
++H ++K SNI + S + D GL T TS + YRAPEV +
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 506 DVYSFGVVLLEILTGK 521
D++S G ++ E++ K
Sbjct: 207 DIWSVGCIMGEMVRHK 222
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Query: 448 LVHGNIKSSNIFLNSQQYGC---VSDLGLTTITSALAPVIAR--AAGYRAPEVTDSRKAT 502
+VH ++K N+ L S+ + D GL+ + R A Y APEV +K
Sbjct: 142 IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVL-RKKYD 200
Query: 503 QASDVYSFGVVLLEILTGKSPIHTTGGDELVHLV 536
+ DV+S GV+L +L G P E++ V
Sbjct: 201 EKCDVWSCGVILYILLCGYPPFGGQTDQEILKRV 234
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGL--TTITSALAPVIARAAGYRAPEVTDSRKATQAS 505
++H ++K SNI + S + D GL T TS + YRAPEV +
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 506 DVYSFGVVLLEILTGK 521
D++S G ++ E++ K
Sbjct: 207 DIWSVGCIMGEMVRHK 222
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLT---TITSALAPVIARAAGYRAPEVTDSRKATQ 503
++VH ++K+ N+ L++ ++D G + T+ L + Y APE+ +K
Sbjct: 131 RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCG-SPPYAAPELFQGKKYDG 189
Query: 504 AS-DVYSFGVVLLEILTGKSPIHTTGGDEL 532
DV+S GV+L +++G P EL
Sbjct: 190 PEVDVWSLGVILYTLVSGSLPFDGQNLKEL 219
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 35.8 bits (81), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLT---TITSALAPVIARAAGYRAPEVTDSRKATQA 504
+VH ++K+ N+ L++ ++D G + T + L A Y APE+ +K
Sbjct: 134 IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCG-APPYAAPELFQGKKYDGP 192
Query: 505 S-DVYSFGVVLLEILTGKSPIHTTGGDEL 532
DV+S GV+L +++G P EL
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFDGQNLKEL 221
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 83/226 (36%), Gaps = 26/226 (11%)
Query: 332 LGKGTFGMAYKAIL------EDGTTVVVKRLKDVNVGKR--DFEQQMEIVGSIRHENVVE 383
LG+G+FGM Y+ + E T V +K + + + +F + ++ +VV
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 82
Query: 384 LKAYYYSKDEKLMVYDYYSLGSVSAMLHSER-GEGRIP-LDWDTXXXXXXXXXXXXXXXX 441
L L++ + + G + + L S R P L +
Sbjct: 83 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 142
Query: 442 XXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTIT----------SALAPVIARAAGYR 491
K VH ++ + N + + D G+T L PV +
Sbjct: 143 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-----RWM 197
Query: 492 APEVTDSRKATQASDVYSFGVVLLEILT-GKSPIHTTGGDELVHLV 536
+PE T SDV+SFGVVL EI T + P ++++ V
Sbjct: 198 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 243
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 35.8 bits (81), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGL--TTITSALAPVIARAAGYRAPEVTDSRKATQAS 505
++H ++K SNI + S + D GL T T+ + YRAPEV
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYAANV 206
Query: 506 DVYSFGVVLLEILTG 520
D++S G ++ E++ G
Sbjct: 207 DIWSVGCIMGELVKG 221
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Query: 448 LVHGNIKSSNIFLNSQQYGC---VSDLGLTTITSALAPVIAR--AAGYRAPEVTDSRKAT 502
+VH ++K N+ L S+ + D GL+ + R A Y APEV +K
Sbjct: 125 IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVL-RKKYD 183
Query: 503 QASDVYSFGVVLLEILTGKSPIHTTGGDELVHLV 536
+ DV+S GV+L +L G P E++ V
Sbjct: 184 EKCDVWSCGVILYILLCGYPPFGGQTDQEILKRV 217
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 35.8 bits (81), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 79/211 (37%), Gaps = 24/211 (11%)
Query: 329 AEVLGKGTFGMAYKAIL-----EDGT-TVVVKRLKDVNVG--KRDFEQQMEIVGSI-RHE 379
+ LG G FG +A ED V VK LK K +++I+ + +HE
Sbjct: 43 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE 102
Query: 380 NVVELKAYYYSKDEKLMVYDYYSLGSVSAMLHS------ERGEGRIPLDWDTXXXXXXXX 433
N+V L L++ +Y G + L ++ +GR PL+
Sbjct: 103 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGR-PLE---LRDLLHFS 158
Query: 434 XXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG---- 489
+H ++ + N+ L + + D GL + I +
Sbjct: 159 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 218
Query: 490 -YRAPEVTDSRKATQASDVYSFGVVLLEILT 519
+ APE T SDV+S+G++L EI +
Sbjct: 219 KWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 35.4 bits (80), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 98/263 (37%), Gaps = 59/263 (22%)
Query: 317 YAFDLEDLLRASAEVLGKGTFGMAYKAI-LEDGTTVVVKRLKDVNVGKRDFEQQMEIVGS 375
YA D E++ VLG+G FG KA D +K+++ ++ ++ S
Sbjct: 4 YASDFEEI-----AVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLAS 58
Query: 376 IRHENVVELKAYYY-------------SKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLD 422
+ H+ VV A + K + +Y G++ ++HSE +
Sbjct: 59 LNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEY 118
Query: 423 WDTXXXXXXXXXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLT-------- 474
W ++H ++K NIF++ + + D GL
Sbjct: 119 W-------RLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLD 171
Query: 475 --------------TITSALAPVIARAAGYRAPEVTD-SRKATQASDVYSFGVVLLEILT 519
+TSA+ A Y A EV D + + D+YS G++ E++
Sbjct: 172 ILKLDSQNLPGSSDNLTSAIG-----TAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY 226
Query: 520 GKSPIHTTGGDELVHLVRWVHSV 542
P T G E V++++ + SV
Sbjct: 227 ---PFST--GMERVNILKKLRSV 244
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 35.4 bits (80), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGL--TTITSALAPVIARAAGYRAPEVTDSRKATQAS 505
++H ++K SNI + S + D GL T TS + YRAPEV +
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 506 DVYSFGVVLLEILTGK 521
D++S G ++ E++ K
Sbjct: 207 DIWSVGCIMGEMVRHK 222
>pdb|2R9U|A Chain A, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|B Chain B, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|C Chain C, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|D Chain D, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
Length = 174
Score = 35.4 bits (80), Expect = 0.100, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 96 LSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLPD--FSVWKNLTIINLSDNGFNGT 153
L L +N IT P F +L +L LY N + +P F LT ++L+DN +
Sbjct: 38 LWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTA-IPTGVFDKLTQLTQLDLNDNHLK-S 95
Query: 154 IPR-SLSNLTQLEALYLANN 172
IPR + NL L +YL NN
Sbjct: 96 IPRGAFDNLKSLTHIYLYNN 115
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGL--TTITSALAPVIARAAGYRAPEVTDSRKATQAS 505
++H ++K SNI + S + D GL T TS + YRAPEV +
Sbjct: 140 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 199
Query: 506 DVYSFGVVLLEILTGK 521
D++S G ++ E++ K
Sbjct: 200 DIWSVGCIMGEMVRHK 215
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGL--TTITSALAPVIARAAGYRAPEVTDSRKATQAS 505
++H ++K SNI + S + D GL T TS + YRAPEV +
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 200
Query: 506 DVYSFGVVLLEILTGK 521
D++S G ++ E++ K
Sbjct: 201 DIWSVGCIMGEMVRHK 216
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGL--TTITSALAPVIARAAGYRAPEVTDSRKATQAS 505
++H ++K SNI + S + D GL T TS + YRAPEV +
Sbjct: 146 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 205
Query: 506 DVYSFGVVLLEILTGK 521
D++S G ++ E++ K
Sbjct: 206 DIWSVGCIMGEMVRHK 221
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGL--TTITSALAPVIARAAGYRAPEVTDSRKATQAS 505
++H ++K SNI + S + D GL T TS + YRAPEV +
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 200
Query: 506 DVYSFGVVLLEILTGK 521
D++S G ++ E++ K
Sbjct: 201 DIWSVGCIMGEMVRHK 216
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGL--TTITSALAPVIARAAGYRAPEVTDSRKATQAS 505
++H ++K SNI + S + D GL T TS + YRAPEV +
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 207
Query: 506 DVYSFGVVLLEILTGK 521
D++S G ++ E++ K
Sbjct: 208 DIWSVGCIMGEMVRHK 223
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGL--TTITSALAPVIARAAGYRAPEVTDSRKATQAS 505
++H ++K SNI + S + D GL T TS + YRAPEV +
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 207
Query: 506 DVYSFGVVLLEILTGK 521
D++S G ++ E++ K
Sbjct: 208 DIWSVGCIMGEMVRHK 223
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGL--TTITSALAPVIARAAGYRAPEVTDSRKATQAS 505
++H ++K SNI + S + D GL T TS + YRAPEV +
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 506 DVYSFGVVLLEILTGK 521
D++S G ++ E++ K
Sbjct: 207 DIWSVGCIMGEMVRHK 222
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 81/214 (37%), Gaps = 28/214 (13%)
Query: 328 SAEVLGKGTFGMAYKAI-----LEDGTTVVVKRLKDVN---VGKRDFEQQMEIVGSIRHE 379
+ E LG G F + K L+ + KR + V + D E+++ I+ I+H
Sbjct: 15 TGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 380 NVVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXX 439
NV+ L Y +K + +++ + + G + L + T
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKESL--------TEEEATEFLKQILNG 126
Query: 440 XXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYR-------- 491
++ H ++K NI L + V + I LA I ++
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRN---VPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF 183
Query: 492 -APEVTDSRKATQASDVYSFGVVLLEILTGKSPI 524
APE+ + +D++S GV+ +L+G SP
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 81/214 (37%), Gaps = 28/214 (13%)
Query: 328 SAEVLGKGTFGMAYKAI-----LEDGTTVVVKRLKDVN---VGKRDFEQQMEIVGSIRHE 379
+ E LG G F + K L+ + KR + V + D E+++ I+ I+H
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 380 NVVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXX 439
NV+ L Y +K + +++ + + G + L + T
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKESL--------TEEEATEFLKQILNG 126
Query: 440 XXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYR-------- 491
++ H ++K NI L + V + I LA I ++
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRN---VPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF 183
Query: 492 -APEVTDSRKATQASDVYSFGVVLLEILTGKSPI 524
APE+ + +D++S GV+ +L+G SP
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 81/214 (37%), Gaps = 28/214 (13%)
Query: 328 SAEVLGKGTFGMAYKAI-----LEDGTTVVVKRLKDVN---VGKRDFEQQMEIVGSIRHE 379
+ E LG G F + K L+ + KR + V + D E+++ I+ I+H
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 380 NVVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXX 439
NV+ L Y +K + +++ + + G + L + T
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKESL--------TEEEATEFLKQILNG 126
Query: 440 XXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYR-------- 491
++ H ++K NI L + V + I LA I ++
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRN---VPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF 183
Query: 492 -APEVTDSRKATQASDVYSFGVVLLEILTGKSPI 524
APE+ + +D++S GV+ +L+G SP
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 81/214 (37%), Gaps = 28/214 (13%)
Query: 328 SAEVLGKGTFGMAYKAI-----LEDGTTVVVKRLKDVN---VGKRDFEQQMEIVGSIRHE 379
+ E LG G F + K L+ + KR + V + D E+++ I+ I+H
Sbjct: 14 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 73
Query: 380 NVVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXX 439
NV+ L Y +K + +++ + + G + L + T
Sbjct: 74 NVITLHEVYENKTDVILILELVAGGELFDFLAEKESL--------TEEEATEFLKQILNG 125
Query: 440 XXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYR-------- 491
++ H ++K NI L + V + I LA I ++
Sbjct: 126 VYYLHSLQIAHFDLKPENIMLLDRN---VPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF 182
Query: 492 -APEVTDSRKATQASDVYSFGVVLLEILTGKSPI 524
APE+ + +D++S GV+ +L+G SP
Sbjct: 183 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 448 LVHGNIKSSNIFLNSQ----QYGCVSDLGLTTITSA---LAPVIARAAGYRAPEVTDSRK 500
+VH ++K SNI + + + D G A L A + APEV + +
Sbjct: 137 VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQG 196
Query: 501 ATQASDVYSFGVVLLEILTGKSP 523
A D++S GV+L +LTG +P
Sbjct: 197 YDAACDIWSLGVLLYTMLTGYTP 219
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 81/214 (37%), Gaps = 28/214 (13%)
Query: 328 SAEVLGKGTFGMAYKAI-----LEDGTTVVVKRLKDVN---VGKRDFEQQMEIVGSIRHE 379
+ E LG G F + K L+ + KR + V + D E+++ I+ I+H
Sbjct: 15 TGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 380 NVVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXX 439
NV+ L Y +K + +++ + + G + L + T
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKESL--------TEEEATEFLKQILNG 126
Query: 440 XXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYR-------- 491
++ H ++K NI L + V + I LA I ++
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRN---VPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF 183
Query: 492 -APEVTDSRKATQASDVYSFGVVLLEILTGKSPI 524
APE+ + +D++S GV+ +L+G SP
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 79/211 (37%), Gaps = 24/211 (11%)
Query: 329 AEVLGKGTFGMAYKAIL-----EDGT-TVVVKRLKDVNVG--KRDFEQQMEIVGSI-RHE 379
+ LG G FG +A ED V VK LK K +++I+ + +HE
Sbjct: 51 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE 110
Query: 380 NVVELKAYYYSKDEKLMVYDYYSLGSVSAMLHS------ERGEGRIPLDWDTXXXXXXXX 433
N+V L L++ +Y G + L ++ +GR PL+
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGR-PLE---LRDLLHFS 166
Query: 434 XXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG---- 489
+H ++ + N+ L + + D GL + I +
Sbjct: 167 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 226
Query: 490 -YRAPEVTDSRKATQASDVYSFGVVLLEILT 519
+ APE T SDV+S+G++L EI +
Sbjct: 227 KWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 85/212 (40%), Gaps = 19/212 (8%)
Query: 330 EVLGKGTFGMAYKA--ILEDGTTVVVKRLKDVNVGKRDFEQ---QMEIVGSIRHENVVEL 384
+ +GKG F A IL G V VK + + ++ ++ I+ + H N+V+L
Sbjct: 20 KTIGKGNFAKVKLARHIL-TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 385 KAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXX 444
++ +V +Y S G V L + GR+
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAH---GRM-----KEKEARAKFRQIVSAVQYCH 130
Query: 445 XXKLVHGNIKSSNIFLNSQQYGCVSDLGLT---TITSALAPVIARAAGYRAPEVTDSRKA 501
+VH ++K+ N+ L++ ++D G + T + L + Y APE+ +K
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCG-SPPYAAPELFQGKKY 189
Query: 502 TQAS-DVYSFGVVLLEILTGKSPIHTTGGDEL 532
DV+S GV+L +++G P EL
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKEL 221
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 85/212 (40%), Gaps = 19/212 (8%)
Query: 330 EVLGKGTFGMAYKA--ILEDGTTVVVKRLKDVNVGKRDFEQ---QMEIVGSIRHENVVEL 384
+ +GKG F A IL G V VK + + ++ ++ I+ + H N+V+L
Sbjct: 20 KTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL 78
Query: 385 KAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXX 444
++ +V +Y S G V L + GR+
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAH---GRM-----KEKEARAKFRQIVSAVQYCH 130
Query: 445 XXKLVHGNIKSSNIFLNSQQYGCVSDLGLT---TITSALAPVIARAAGYRAPEVTDSRKA 501
+VH ++K+ N+ L++ ++D G + T + L + Y APE+ +K
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCG-SPPYAAPELFQGKKY 189
Query: 502 TQAS-DVYSFGVVLLEILTGKSPIHTTGGDEL 532
DV+S GV+L +++G P EL
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKEL 221
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGL--TTITSALAPVIARAAGYRAPEVTDSRKATQAS 505
++H ++K SNI + S + D GL T TS + YRAPEV +
Sbjct: 185 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 244
Query: 506 DVYSFGVVLLEILTGK 521
D++S G ++ E++ K
Sbjct: 245 DIWSVGCIMGEMVRHK 260
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 86/213 (40%), Gaps = 37/213 (17%)
Query: 332 LGKGTFGMAYKAI-LEDGTTVVVKRLK----DVNVGKRDFEQQMEIVGSIRHENVVELKA 386
LG+GT+G YKAI TV +KR++ + V +++ ++ ++H N++ELK+
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAI-REVSLLKELQHRNIIELKS 100
Query: 387 YYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXX 446
+ ++++Y M + R+
Sbjct: 101 VIHHNHRLHLIFEYAENDLKKYMDKNPDVSMRV---------IKSFLYQLINGVNFCHSR 151
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG--------------YRA 492
+ +H ++K N+ L+ VSD T + +ARA G YR
Sbjct: 152 RCLHRDLKPQNLLLS------VSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRP 205
Query: 493 PEV-TDSRKATQASDVYSFGVVLLEILTGKSPI 524
PE+ SR + + D++S + E+L K+P+
Sbjct: 206 PEILLGSRHYSTSVDIWSIACIWAEMLM-KTPL 237
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLT---TITSALAPVIARAAGYRAPEVTDSRKATQA 504
+VH ++K+ N+ L+ ++D G + T+ + L + Y APE+ +K
Sbjct: 135 IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCG-SPPYAAPELFQGKKYDGP 193
Query: 505 S-DVYSFGVVLLEILTGKSPIHTTGGDEL 532
DV+S GV+L +++G P EL
Sbjct: 194 EVDVWSLGVILYTLVSGSLPFDGQNLKEL 222
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 81/214 (37%), Gaps = 28/214 (13%)
Query: 328 SAEVLGKGTFGMAYKAI-----LEDGTTVVVKRLKDVN---VGKRDFEQQMEIVGSIRHE 379
+ E LG G F + K L+ + KR + V + D E+++ I+ I+H
Sbjct: 14 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 73
Query: 380 NVVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXX 439
NV+ L Y +K + +++ + + G + L + T
Sbjct: 74 NVITLHEVYENKTDVILILELVAGGELFDFLAEKESL--------TEEEATEFLKQILNG 125
Query: 440 XXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYR-------- 491
++ H ++K NI L + V + I LA I ++
Sbjct: 126 VYYLHSLQIAHFDLKPENIMLLDRN---VPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF 182
Query: 492 -APEVTDSRKATQASDVYSFGVVLLEILTGKSPI 524
APE+ + +D++S GV+ +L+G SP
Sbjct: 183 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 41/101 (40%), Gaps = 3/101 (2%)
Query: 81 LIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLPD--FSVWK 138
++ P T L L L L + P F L +L YLYLQ NN LPD F
Sbjct: 94 VVDPTTFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQA-LPDNTFRDLG 152
Query: 139 NLTIINLSDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIP 179
NLT + L N + L L+ L L N ++ P
Sbjct: 153 NLTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHP 193
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLT---TITSALAPVIARAAGYRAPEVTDSRKATQA 504
+VH ++K+ N+ L++ ++D G + T + L + Y APE+ +K
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCG-SPPYAAPELFQGKKYDGP 192
Query: 505 S-DVYSFGVVLLEILTGKSPIHTTGGDEL 532
DV+S GV+L +++G P EL
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFDGQNLKEL 221
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGL--TTITSALAPVIARAAGYRAPEVTDSRKATQAS 505
++H ++K SNI + S + D GL T TS + YRAPEV +
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 200
Query: 506 DVYSFGVVLLEILTGK 521
D++S G ++ E++ K
Sbjct: 201 DLWSVGCIMGEMVCHK 216
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 81/214 (37%), Gaps = 28/214 (13%)
Query: 328 SAEVLGKGTFGMAYKAI-----LEDGTTVVVKRLKDVN---VGKRDFEQQMEIVGSIRHE 379
+ E LG G F + K L+ + KR + V + D E+++ I+ I+H
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 380 NVVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXX 439
NV+ L Y +K + +++ + + G + L + T
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKESL--------TEEEATEFLKQILNG 126
Query: 440 XXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYR-------- 491
++ H ++K NI L + V + I LA I ++
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRN---VPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF 183
Query: 492 -APEVTDSRKATQASDVYSFGVVLLEILTGKSPI 524
APE+ + +D++S GV+ +L+G SP
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGL--TTITSALAPVIARAAGYRAPEVTDSRKATQAS 505
++H ++K SNI + S + D GL T TS + YRAPEV +
Sbjct: 152 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 211
Query: 506 DVYSFGVVLLEILTGK 521
D++S G ++ E++ K
Sbjct: 212 DLWSVGCIMGEMVCHK 227
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 7/84 (8%)
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLT------TITSALAPVIAR-AAGYRAPEVTDSR 499
K VH ++ + N L+ V+D GL S AR + A E +
Sbjct: 144 KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTY 203
Query: 500 KATQASDVYSFGVVLLEILTGKSP 523
+ T SDV+SFGV+L E+LT +P
Sbjct: 204 RFTTKSDVWSFGVLLWELLTRGAP 227
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 81/214 (37%), Gaps = 28/214 (13%)
Query: 328 SAEVLGKGTFGMAYKAI-----LEDGTTVVVKRLKDVN---VGKRDFEQQMEIVGSIRHE 379
+ E LG G F + K L+ + KR + V + D E+++ I+ I+H
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 380 NVVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXX 439
NV+ L Y +K + +++ + + G + L + T
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKESL--------TEEEATEFLKQILNG 126
Query: 440 XXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYR-------- 491
++ H ++K NI L + V + I LA I ++
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRN---VPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF 183
Query: 492 -APEVTDSRKATQASDVYSFGVVLLEILTGKSPI 524
APE+ + +D++S GV+ +L+G SP
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/160 (19%), Positives = 67/160 (41%), Gaps = 32/160 (20%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTT-----ITSALAPVIARAAGYRAPEVTDSRKAT 502
+VH ++K +N + + D G+ TS + A Y PE ++
Sbjct: 176 IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSS 234
Query: 503 QAS-----------DVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEV 551
+ + DV+S G +L + GK+P ++++ + +H+++ E
Sbjct: 235 RENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ-----QIINQISKLHAIIDPNHEIE- 288
Query: 552 FDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVV 591
+P+I E+ ++ + C+ R P QR +P+++
Sbjct: 289 -------FPDIPEK--DLQDVLKCCLKRDPKQRISIPELL 319
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/154 (19%), Positives = 67/154 (43%), Gaps = 27/154 (17%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLT--TITSALAPVIARAAGYRAPEVT----DSRKA 501
++H ++K SN+ +N+ + D G++ + S + A Y APE + +
Sbjct: 175 VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGY 234
Query: 502 TQASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVRE---EWTAEVFDVELLR 558
+ SD++S G+ ++E+ + P + G + + VV E + A+ F E +
Sbjct: 235 SVKSDIWSLGITMIELAILRFPYDSWGTP-----FQQLKQVVEEPSPQLPADKFSAEFVD 289
Query: 559 YPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR 592
+ + C+ + +RP P++++
Sbjct: 290 FTS-------------QCLKKNSKERPTYPELMQ 310
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/212 (20%), Positives = 81/212 (38%), Gaps = 24/212 (11%)
Query: 328 SAEVLGKGTFGMAYKAI-----LEDGTTVVVKRLKDVN---VGKRDFEQQMEIVGSIRHE 379
+ E LG G F + K L+ + KR + V + D E+++ I+ I+H
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 380 NVVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXX 439
NV+ L Y +K + +++ + + G + L + T
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKESL--------TEEEATEFLKQILNG 126
Query: 440 XXXXXXXKLVHGNIKSSNIFLNSQQYG----CVSDLGLT---TITSALAPVIARAAGYRA 492
++ H ++K NI L + + D GL + + A + A
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPA-FVA 185
Query: 493 PEVTDSRKATQASDVYSFGVVLLEILTGKSPI 524
PE+ + +D++S GV+ +L+G SP
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 77/220 (35%), Gaps = 29/220 (13%)
Query: 329 AEVLGKGTFGMAYKAIL-----EDGT-TVVVKRLKDVNVG--KRDFEQQMEIVGSI-RHE 379
+ LG G FG +A ED V VK LK K +++I+ + +HE
Sbjct: 36 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE 95
Query: 380 NVVELKAYYYSKDEKLMVYDYYSLGSV--------SAMLHSERGEGRIPLDWDTX----- 426
N+V L L++ +Y G + AML G+ P D
Sbjct: 96 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPL 155
Query: 427 --XXXXXXXXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVI 484
+H ++ + N+ L + + D GL + I
Sbjct: 156 ELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 215
Query: 485 ARAAG-----YRAPEVTDSRKATQASDVYSFGVVLLEILT 519
+ + APE T SDV+S+G++L EI +
Sbjct: 216 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGL--TTITSALAPVIARAAGYRAPEVTDSRKATQAS 505
++H ++K SNI + S + D GL T TS + YRAPEV +
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMGYKENV 206
Query: 506 DVYSFGVVLLEILTGK 521
D++S G ++ E++ K
Sbjct: 207 DIWSVGCIMGEMVCHK 222
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLT---TITSALAPVIARAAGYRAPEVTDSRKATQA 504
+VH ++K+ N+ L++ ++D G + T + L + Y APE+ +K
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCG-SPPYAAPELFQGKKYDGP 192
Query: 505 S-DVYSFGVVLLEILTGKSPIHTTGGDEL 532
DV+S GV+L +++G P EL
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFDGQNLKEL 221
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 81/214 (37%), Gaps = 28/214 (13%)
Query: 328 SAEVLGKGTFGMAYKAI-----LEDGTTVVVKRLKDVN---VGKRDFEQQMEIVGSIRHE 379
+ E LG G F + K L+ + KR + V + D E+++ I+ I+H
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 380 NVVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXX 439
NV+ L Y +K + +++ + + G + L + T
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKESL--------TEEEATEFLKQILNG 126
Query: 440 XXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYR-------- 491
++ H ++K NI L + V + I LA I ++
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRN---VPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF 183
Query: 492 -APEVTDSRKATQASDVYSFGVVLLEILTGKSPI 524
APE+ + +D++S GV+ +L+G SP
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGL--TTITSALAPVIARAAGYRAPEVTDSRKATQAS 505
++H ++K SNI + S + D GL T TS + YRAPEV +
Sbjct: 185 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 244
Query: 506 DVYSFGVVLLEILTGK 521
D++S G ++ E++ K
Sbjct: 245 DIWSVGCIMGEMVRHK 260
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 91/220 (41%), Gaps = 33/220 (15%)
Query: 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLK---DVNVGKRDFEQQMEIVGSIRHENVVELK 385
E +G G +G+ A G V +K++ DV + ++++I+ +H+N++ +K
Sbjct: 61 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIK 120
Query: 386 AYY-----YSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXX 440
Y + + + V + ++HS + PL T
Sbjct: 121 DILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQ-----PL---TLEHVRYFLYQLLRGL 172
Query: 441 XXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTT--ITSA------LAPVIARAAGYRA 492
+++H ++K SN+ +N + D G+ TS + +A YRA
Sbjct: 173 KYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVA-TRWYRA 231
Query: 493 PEVTDS-RKATQASDVYSFGVVLLEILT------GKSPIH 525
PE+ S + TQA D++S G + E+L GK+ +H
Sbjct: 232 PELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVH 271
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 5/87 (5%)
Query: 448 LVHGNIKSSNIFLNSQQYGCV---SDLGLTTITSALAPVI--ARAAGYRAPEVTDSRKAT 502
+ H ++K N+ S++ + +D G T++ + Y APEV K
Sbjct: 182 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD 241
Query: 503 QASDVYSFGVVLLEILTGKSPIHTTGG 529
++ D +S GV+ +L G P ++ G
Sbjct: 242 KSCDXWSLGVIXYILLCGYPPFYSNHG 268
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 95/263 (36%), Gaps = 59/263 (22%)
Query: 317 YAFDLEDLLRASAEVLGKGTFGMAYKAI-LEDGTTVVVKRLKDVNVGKRDFEQQMEIVGS 375
YA D E++ VLG+G FG KA D +K+++ ++ ++ S
Sbjct: 4 YASDFEEI-----AVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLAS 58
Query: 376 IRHENVVELKAYYY-------------SKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLD 422
+ H+ VV A + K + +Y ++ ++HSE +
Sbjct: 59 LNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEY 118
Query: 423 WDTXXXXXXXXXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLT-------- 474
W ++H N+K NIF++ + + D GL
Sbjct: 119 W-------RLFRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLD 171
Query: 475 --------------TITSALAPVIARAAGYRAPEVTD-SRKATQASDVYSFGVVLLEILT 519
+TSA+ A Y A EV D + + D YS G++ E +
Sbjct: 172 ILKLDSQNLPGSSDNLTSAIG-----TAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIY 226
Query: 520 GKSPIHTTGGDELVHLVRWVHSV 542
P T G E V++++ + SV
Sbjct: 227 ---PFST--GXERVNILKKLRSV 244
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 81/214 (37%), Gaps = 28/214 (13%)
Query: 328 SAEVLGKGTFGMAYKAI-----LEDGTTVVVKRLKDVN---VGKRDFEQQMEIVGSIRHE 379
+ E LG G F + K L+ + KR + V + D E+++ I+ I+H
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 380 NVVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXX 439
NV+ L Y +K + +++ + + G + L + T
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKESL--------TEEEATEFLKQILNG 126
Query: 440 XXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYR-------- 491
++ H ++K NI L + V + I LA I ++
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRN---VPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF 183
Query: 492 -APEVTDSRKATQASDVYSFGVVLLEILTGKSPI 524
APE+ + +D++S GV+ +L+G SP
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 81/214 (37%), Gaps = 28/214 (13%)
Query: 328 SAEVLGKGTFGMAYKAI-----LEDGTTVVVKRLKDVN---VGKRDFEQQMEIVGSIRHE 379
+ E LG G F + K L+ + KR + V + D E+++ I+ I+H
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 380 NVVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXX 439
NV+ L Y +K + +++ + + G + L + T
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKESL--------TEEEATEFLKQILNG 126
Query: 440 XXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYR-------- 491
++ H ++K NI L + V + I LA I ++
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRN---VPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF 183
Query: 492 -APEVTDSRKATQASDVYSFGVVLLEILTGKSPI 524
APE+ + +D++S GV+ +L+G SP
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 62/314 (19%), Positives = 122/314 (38%), Gaps = 48/314 (15%)
Query: 310 FFFEGCNYAFDLEDLLRASAEVLGKGTFGMAYKAILE---DGTTVVVKR-LKDVNVGKRD 365
+F+G D + L + LG+G G +Y ++E DG +KR L + +
Sbjct: 17 LYFQGHMVIIDNKHYL--FIQKLGEG--GFSYVDLVEGLHDGHFYALKRILCHEQQDREE 72
Query: 366 FEQQMEIVGSIRHENVVELKAYYY----SKDEKLMVYDYYSLGSVSAMLHSERGEGRIPL 421
+++ ++ H N++ L AY +K E ++ ++ G++ + + +G
Sbjct: 73 AQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKG---- 128
Query: 422 DWDTXXXXXXXXXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLG------LTT 475
++ T H ++K +NI L + + DLG +
Sbjct: 129 NFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHV 188
Query: 476 ITSALAPVIARAAG------YRAPEVTDSRKAT---QASDVYSFGVVLLEILTGKSPIHT 526
S A + A YRAPE+ + + +DV+S G VL ++ G+ P
Sbjct: 189 EGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGP--- 245
Query: 527 TGGDELVHLVRWVHSVVREEWTAEVFDVE-LLRYPNIEEEMVEMLQIAMSCVVRMPDQRP 585
+ +V ++ + V+ L P + Q+ S + P QRP
Sbjct: 246 -------------YDMVFQKGDSVALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRP 292
Query: 586 KMPDVVRVIENVRP 599
+P ++ +E ++P
Sbjct: 293 HIPLLLSQLEALQP 306
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
Query: 448 LVHGNIKSSNIFLNSQQYGC----VSDLGLTTITSA---LAPVIARAAGYRAPEVTDSRK 500
+VH ++K SNI + + D G A L A + APEV + +
Sbjct: 137 VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVAPEVLERQG 196
Query: 501 ATQASDVYSFGVVLLEILTGKSP 523
A D++S GV+L LTG +P
Sbjct: 197 YDAACDIWSLGVLLYTXLTGYTP 219
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 81/214 (37%), Gaps = 28/214 (13%)
Query: 328 SAEVLGKGTFGMAYKAI-----LEDGTTVVVKRLKDVN---VGKRDFEQQMEIVGSIRHE 379
+ E LG G F + K L+ + KR + V + D E+++ I+ I+H
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 380 NVVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXX 439
NV+ L Y +K + +++ + + G + L + T
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKESL--------TEEEATEFLKQILNG 126
Query: 440 XXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYR-------- 491
++ H ++K NI L + V + I LA I ++
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRN---VPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF 183
Query: 492 -APEVTDSRKATQASDVYSFGVVLLEILTGKSPI 524
APE+ + +D++S GV+ +L+G SP
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 81/214 (37%), Gaps = 28/214 (13%)
Query: 328 SAEVLGKGTFGMAYKAI-----LEDGTTVVVKRLKDVN---VGKRDFEQQMEIVGSIRHE 379
+ E LG G F + K L+ + KR + V + D E+++ I+ I+H
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 380 NVVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXX 439
NV+ L Y +K + +++ + + G + L + T
Sbjct: 75 NVITLHEVYENKTDVILIGELVAGGELFDFLAEKESL--------TEEEATEFLKQILNG 126
Query: 440 XXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYR-------- 491
++ H ++K NI L + V + I LA I ++
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRN---VPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF 183
Query: 492 -APEVTDSRKATQASDVYSFGVVLLEILTGKSPI 524
APE+ + +D++S GV+ +L+G SP
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGL--TTITSALAPVIARAAGYRAPEVTDSRKATQAS 505
++H ++K SNI + S + D GL T TS + YRAPEV +
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMGYKENV 206
Query: 506 DVYSFGVVLLEILTGK 521
D++S G ++ E++ K
Sbjct: 207 DLWSVGCIMGEMVCHK 222
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 91/220 (41%), Gaps = 33/220 (15%)
Query: 330 EVLGKGTFGMAYKAILE-DGTTVVVKRLK---DVNVGKRDFEQQMEIVGSIRHENVVELK 385
E +G G +G+ A G V +K++ DV + ++++I+ +H+N++ +K
Sbjct: 60 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIK 119
Query: 386 AYY-----YSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXX 440
Y + + + V + ++HS + PL T
Sbjct: 120 DILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQ-----PL---TLEHVRYFLYQLLRGL 171
Query: 441 XXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTT--ITSA------LAPVIARAAGYRA 492
+++H ++K SN+ +N + D G+ TS + +A YRA
Sbjct: 172 KYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVA-TRWYRA 230
Query: 493 PEVTDS-RKATQASDVYSFGVVLLEILT------GKSPIH 525
PE+ S + TQA D++S G + E+L GK+ +H
Sbjct: 231 PELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVH 270
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 113/330 (34%), Gaps = 61/330 (18%)
Query: 318 AFDLEDLLRASAEVLGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKRDFEQQMEIVGSIR 377
+ DL++L E++G+G +G YK L D V VK N E+ + V +
Sbjct: 9 SLDLDNL--KLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEKNIYRVPLME 65
Query: 378 HENVVEL-----KAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXX 432
H+N+ + + E L+V +YY GS+ L +
Sbjct: 66 HDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLA 125
Query: 433 XXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLT---TITSALAPVIARAAG 489
+ H ++ S N+ + + +SD GL+ T + P A
Sbjct: 126 YLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAA 185
Query: 490 --------YRAPEV-------TDSRKATQASDVYSFGVVLLEILTGKSPIHTTGGDELVH 534
Y APEV D A + D+Y+ G++ EI + +
Sbjct: 186 ISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPG------- 238
Query: 535 LVRWVHSVVREEWTAEVFDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVVR-- 592
V E A F E+ +P E+ M +V QRPK P+ +
Sbjct: 239 ------ESVPEYQMA--FQTEVGNHPTFED---------MQVLVSREKQRPKFPEAWKEN 281
Query: 593 ---------VIENVRPNDSENRPSSGNKSE 613
IE+ D+E R ++ E
Sbjct: 282 SLAVRSLKETIEDCWDQDAEARLTAQXAEE 311
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 84/221 (38%), Gaps = 29/221 (13%)
Query: 320 DLEDLLRASAEVLGKGTFGMAYKAILE-DGTTVVVKRLKDVN-------VGKRDFEQQME 371
D+ED E LG G F + K + G K +K V + + E+++
Sbjct: 9 DVEDHYEMGEE-LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVN 67
Query: 372 IVGSIRHENVVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXX 431
I+ IRH N++ L + +K + +++ + S G + L + T
Sbjct: 68 ILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESL--------TEDEATQ 119
Query: 432 XXXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYR 491
++ H ++K NI L + V + + I +A I ++
Sbjct: 120 FLKQILDGVHYLHSKRIAHFDLKPENIMLLDKN---VPNPRIKLIDFGIAHKIEAGNEFK 176
Query: 492 ---------APEVTDSRKATQASDVYSFGVVLLEILTGKSP 523
APE+ + +D++S GV+ +L+G SP
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 41/205 (20%), Positives = 83/205 (40%), Gaps = 15/205 (7%)
Query: 327 ASAEVLGKGTFGMAYKA-ILEDGTTVVVKRLKDVNV-GKRDFEQQMEIVGSIRHENVVEL 384
+ E+LG G FG +K G + K +K + K + + ++ ++ + H N+++L
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQL 151
Query: 385 KAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXX 444
+ SK++ ++V +Y G + + E T
Sbjct: 152 YDAFESKNDIVLVMEYVDGGELFDRIIDESYNL-------TELDTILFMKQICEGIRHMH 204
Query: 445 XXKLVHGNIKSSNIFL---NSQQYGCVSDLGLTTITSALAPVIAR--AAGYRAPEVTDSR 499
++H ++K NI +++Q + D GL + + APEV +
Sbjct: 205 QMYILHLDLKPENILCVNRDAKQIKII-DFGLARRYKPREKLKVNFGTPEFLAPEVVNYD 263
Query: 500 KATQASDVYSFGVVLLEILTGKSPI 524
+ +D++S GV+ +L+G SP
Sbjct: 264 FVSFPTDMWSVGVIAYMLLSGLSPF 288
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 43/101 (42%), Gaps = 4/101 (3%)
Query: 82 IPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLPD--FSVWKN 139
+P +L+ LK L L N + F L +L YL L N +LP F N
Sbjct: 100 LPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQ-SLPKGVFDKLTN 158
Query: 140 LTIINLSDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIPD 180
LT ++LS N LTQL+ L L N L +PD
Sbjct: 159 LTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKS-VPD 198
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 33.5 bits (75), Expect = 0.37, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 53/129 (41%), Gaps = 10/129 (7%)
Query: 57 TGVKCSEDGKRVVAVRLPGVGFSGLIPPNTISRLSA---------LKILSLRSNVITGYF 107
T V C+ G + + +P L+ N + R+S+ L L L+ N +TG
Sbjct: 11 TTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIE 70
Query: 108 PSDFINLKSLCYLYLQFNNFSGTLPD-FSVWKNLTIINLSDNGFNGTIPRSLSNLTQLEA 166
P+ F + L L N F L +NL DN + +P S +L L +
Sbjct: 71 PNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTS 130
Query: 167 LYLANNSLS 175
L LA+N +
Sbjct: 131 LNLASNPFN 139
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 30/160 (18%), Positives = 66/160 (41%), Gaps = 32/160 (20%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTT-----ITSALAPVIARAAGYRAPEVTDSRKAT 502
+VH ++K +N + + D G+ TS + Y PE ++
Sbjct: 176 IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSS 234
Query: 503 QAS-----------DVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEV 551
+ + DV+S G +L + GK+P ++++ + +H+++ E
Sbjct: 235 RENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ-----QIINQISKLHAIIDPNHEIE- 288
Query: 552 FDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVV 591
+P+I E+ ++ + C+ R P QR +P+++
Sbjct: 289 -------FPDIPEK--DLQDVLKCCLKRDPKQRISIPELL 319
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVS--DLGLTTITSALAPVIARAAGYRAPEVTDSRKATQAS 505
++H ++K NI L + + + D G + ++ YR+PEV A
Sbjct: 180 IIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAI 239
Query: 506 DVYSFGVVLLEILTGK 521
D++S G +L+E+ TG+
Sbjct: 240 DMWSLGCILVEMHTGE 255
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 9/86 (10%)
Query: 447 KLVHGNIKSSNIFLNSQ-QYGCVSDLGLTTITSA--------LAPVIARAAGYRAPEVTD 497
+++HG++K+ N+ L+S + + D G I + APEV
Sbjct: 205 RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVL 264
Query: 498 SRKATQASDVYSFGVVLLEILTGKSP 523
R DV+S ++L +L G P
Sbjct: 265 GRSCDAKVDVWSSCCMMLHMLNGCHP 290
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 9/86 (10%)
Query: 447 KLVHGNIKSSNIFLNSQ-QYGCVSDLGLTTITSA--------LAPVIARAAGYRAPEVTD 497
+++HG++K+ N+ L+S + + D G I + APEV
Sbjct: 186 RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVL 245
Query: 498 SRKATQASDVYSFGVVLLEILTGKSP 523
R DV+S ++L +L G P
Sbjct: 246 GRSCDAKVDVWSSCCMMLHMLNGCHP 271
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVS--DLGLTTITSALAPVIARAAGYRAPEVTDSRKATQAS 505
++H ++K NI L + + + D G + ++ YR+PEV A
Sbjct: 161 IIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAI 220
Query: 506 DVYSFGVVLLEILTGK 521
D++S G +L+E+ TG+
Sbjct: 221 DMWSLGCILVEMHTGE 236
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 30/160 (18%), Positives = 66/160 (41%), Gaps = 32/160 (20%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTT-----ITSALAPVIARAAGYRAPEVTDSRKAT 502
+VH ++K +N + + D G+ TS + Y PE ++
Sbjct: 176 IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSS 234
Query: 503 QAS-----------DVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEV 551
+ + DV+S G +L + GK+P ++++ + +H+++ E
Sbjct: 235 RENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ-----QIINQISKLHAIIDPNHEIE- 288
Query: 552 FDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVV 591
+P+I E+ ++ + C+ R P QR +P+++
Sbjct: 289 -------FPDIPEK--DLQDVLKCCLKRDPKQRISIPELL 319
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 7/84 (8%)
Query: 448 LVHGNIKSSNIFL--NSQQYGC--VSDLGLTTITSA---LAPVIARAAGYRAPEVTDSRK 500
+VH ++K SNI S C + D G A L A + APEV +
Sbjct: 142 VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQG 201
Query: 501 ATQASDVYSFGVVLLEILTGKSPI 524
+ D++S G++L +L G +P
Sbjct: 202 YDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 30/160 (18%), Positives = 66/160 (41%), Gaps = 32/160 (20%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTT-----ITSALAPVIARAAGYRAPEVTDSRKAT 502
+VH ++K +N + + D G+ TS + Y PE ++
Sbjct: 129 IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSS 187
Query: 503 QAS-----------DVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEV 551
+ + DV+S G +L + GK+P ++++ + +H+++ E
Sbjct: 188 RENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ-----QIINQISKLHAIIDPNHEIE- 241
Query: 552 FDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVV 591
+P+I E+ ++ + C+ R P QR +P+++
Sbjct: 242 -------FPDIPEK--DLQDVLKCCLKRDPKQRISIPELL 272
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/87 (21%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLT--TITSALAPVIARAAGYRAPEVT----DSRKA 501
++H ++K SN+ +N+ + D G++ + + A Y APE + +
Sbjct: 131 VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGY 190
Query: 502 TQASDVYSFGVVLLEILTGKSPIHTTG 528
+ SD++S G+ ++E+ + P + G
Sbjct: 191 SVKSDIWSLGITMIELAILRFPYDSWG 217
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 30/160 (18%), Positives = 66/160 (41%), Gaps = 32/160 (20%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTT-----ITSALAPVIARAAGYRAPEVTDSRKAT 502
+VH ++K +N + + D G+ TS + Y PE ++
Sbjct: 132 IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSS 190
Query: 503 QAS-----------DVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEV 551
+ + DV+S G +L + GK+P ++++ + +H+++ E
Sbjct: 191 RENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ-----QIINQISKLHAIIDPNHEIE- 244
Query: 552 FDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVV 591
+P+I E+ ++ + C+ R P QR +P+++
Sbjct: 245 -------FPDIPEK--DLQDVLKCCLKRDPKQRISIPELL 275
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVS--DLGLTTITSALAPVIARAAGYRAPEVTDSRKATQAS 505
++H ++K NI L + + + D G + ++ YR+PEV A
Sbjct: 180 IIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAI 239
Query: 506 DVYSFGVVLLEILTGK 521
D++S G +L+E+ TG+
Sbjct: 240 DMWSLGCILVEMHTGE 255
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 30/160 (18%), Positives = 66/160 (41%), Gaps = 32/160 (20%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTT-----ITSALAPVIARAAGYRAPEVTDSRKAT 502
+VH ++K +N + + D G+ TS + Y PE ++
Sbjct: 128 IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSS 186
Query: 503 QAS-----------DVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEV 551
+ + DV+S G +L + GK+P ++++ + +H+++ E
Sbjct: 187 RENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ-----QIINQISKLHAIIDPNHEIE- 240
Query: 552 FDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVV 591
+P+I E+ ++ + C+ R P QR +P+++
Sbjct: 241 -------FPDIPEK--DLQDVLKCCLKRDPKQRISIPELL 271
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 32.7 bits (73), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 42/212 (19%), Positives = 80/212 (37%), Gaps = 28/212 (13%)
Query: 329 AEVLGKGTFGMAYKAILE-DGTTVVVKRLKDVN-------VGKRDFEQQMEIVGSIRHEN 380
E LG G F + K + G K +K V + + E+++ I+ IRH N
Sbjct: 10 GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPN 69
Query: 381 VVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXX 440
++ L + +K + +++ + S G + L + T
Sbjct: 70 IITLHDIFENKTDVVLILELVSGGELFDFLAEKESL--------TEDEATQFLKQILDGV 121
Query: 441 XXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYR--------- 491
++ H ++K NI L + V + + I +A I ++
Sbjct: 122 HYLHSKRIAHFDLKPENIMLLDKN---VPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFV 178
Query: 492 APEVTDSRKATQASDVYSFGVVLLEILTGKSP 523
APE+ + +D++S GV+ +L+G SP
Sbjct: 179 APEIVNYEPLGLEADMWSIGVITYILLSGASP 210
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 32.7 bits (73), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 7/84 (8%)
Query: 448 LVHGNIKSSNIFL--NSQQYGC--VSDLGLTTITSA---LAPVIARAAGYRAPEVTDSRK 500
+VH ++K SNI S C + D G A L A + APEV +
Sbjct: 142 VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQG 201
Query: 501 ATQASDVYSFGVVLLEILTGKSPI 524
+ D++S G++L +L G +P
Sbjct: 202 YDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 32.7 bits (73), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 30/160 (18%), Positives = 66/160 (41%), Gaps = 32/160 (20%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTT-----ITSALAPVIARAAGYRAPEVTDSRKAT 502
+VH ++K +N + + D G+ TS + Y PE ++
Sbjct: 148 IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSS 206
Query: 503 QAS-----------DVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEV 551
+ + DV+S G +L + GK+P ++++ + +H+++ E
Sbjct: 207 RENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ-----QIINQISKLHAIIDPNHEIE- 260
Query: 552 FDVELLRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMPDVV 591
+P+I E+ ++ + C+ R P QR +P+++
Sbjct: 261 -------FPDIPEK--DLQDVLKCCLKRDPKQRISIPELL 291
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 32.7 bits (73), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 54/113 (47%), Gaps = 8/113 (7%)
Query: 67 RVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNN 126
++ ++L S + P ++ L+AL L L N + P NLK+L YL L FNN
Sbjct: 262 KLTELKLGANQISNISP---LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNN 316
Query: 127 FSGTLPDFSVWKNLTIINLSDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIP 179
S P S+ K L + S+N + SL+NLT + L +N +S P
Sbjct: 317 ISDISPVSSLTK-LQRLFFSNNKVSDV--SSLANLTNINWLSAGHNQISDLTP 366
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 32.7 bits (73), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 54/113 (47%), Gaps = 8/113 (7%)
Query: 67 RVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNN 126
++ ++L S + P ++ L+AL L L N + P NLK+L YL L FNN
Sbjct: 261 KLTELKLGANQISNISP---LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNN 315
Query: 127 FSGTLPDFSVWKNLTIINLSDNGFNGTIPRSLSNLTQLEALYLANNSLSGKIP 179
S P S+ K L + S+N + SL+NLT + L +N +S P
Sbjct: 316 ISDISPVSSLTK-LQRLFFSNNKVSDV--SSLANLTNINWLSAGHNQISDLTP 365
>pdb|1M9L|A Chain A, Relaxation-Based Refined Structure Of Chlamydomonas Outer
Arm Dynein Light Chain 1
Length = 199
Score = 32.7 bits (73), Expect = 0.62, Method: Composition-based stats.
Identities = 40/146 (27%), Positives = 63/146 (43%), Gaps = 32/146 (21%)
Query: 58 GVKCSEDGKRVVAVRLPGVGFSGLIPP---------------------NTISRLSA---- 92
++ E+ K VVA V G+IPP N I ++S+
Sbjct: 11 AIRIFEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEKISSLSGM 70
Query: 93 --LKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLPDFSVWKNLTIINLSDNGF 150
L+ILSL N+I D + +L L++ +N + +L NL ++ +S+N
Sbjct: 71 ENLRILSLGRNLIKKIENLDAV-ADTLEELWISYNQIA-SLSGIEKLVNLRVLYMSNNKI 128
Query: 151 N--GTIPRSLSNLTQLEALYLANNSL 174
G I + L+ L +LE L LA N L
Sbjct: 129 TNWGEIDK-LAALDKLEDLLLAGNPL 153
>pdb|1DS9|A Chain A, Solution Structure Of Chlamydomonas Outer Arm Dynein Light
Chain 1
Length = 198
Score = 32.7 bits (73), Expect = 0.64, Method: Composition-based stats.
Identities = 40/146 (27%), Positives = 63/146 (43%), Gaps = 32/146 (21%)
Query: 58 GVKCSEDGKRVVAVRLPGVGFSGLIPP---------------------NTISRLSA---- 92
++ E+ K VVA V G+IPP N I ++S+
Sbjct: 10 AIRIFEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEKISSLSGM 69
Query: 93 --LKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLPDFSVWKNLTIINLSDNGF 150
L+ILSL N+I D + +L L++ +N + +L NL ++ +S+N
Sbjct: 70 ENLRILSLGRNLIKKIENLDAV-ADTLEELWISYNQIA-SLSGIEKLVNLRVLYMSNNKI 127
Query: 151 N--GTIPRSLSNLTQLEALYLANNSL 174
G I + L+ L +LE L LA N L
Sbjct: 128 TNWGEIDK-LAALDKLEDLLLAGNPL 152
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 42/212 (19%), Positives = 80/212 (37%), Gaps = 28/212 (13%)
Query: 329 AEVLGKGTFGMAYKAILE-DGTTVVVKRLKDVN-------VGKRDFEQQMEIVGSIRHEN 380
E LG G F + K + G K +K V + + E+++ I+ IRH N
Sbjct: 31 GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPN 90
Query: 381 VVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXX 440
++ L + +K + +++ + S G + L + T
Sbjct: 91 IITLHDIFENKTDVVLILELVSGGELFDFLAEKESL--------TEDEATQFLKQILDGV 142
Query: 441 XXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAGYR--------- 491
++ H ++K NI L + V + + I +A I ++
Sbjct: 143 HYLHSKRIAHFDLKPENIMLLDKN---VPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFV 199
Query: 492 APEVTDSRKATQASDVYSFGVVLLEILTGKSP 523
APE+ + +D++S GV+ +L+G SP
Sbjct: 200 APEIVNYEPLGLEADMWSIGVITYILLSGASP 231
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 32.3 bits (72), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 97/263 (36%), Gaps = 59/263 (22%)
Query: 317 YAFDLEDLLRASAEVLGKGTFGMAYKAI-LEDGTTVVVKRLKDVNVGKRDFEQQMEIVGS 375
YA D E++ VLG+G FG KA D +K+++ ++ ++ S
Sbjct: 4 YASDFEEI-----AVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLAS 58
Query: 376 IRHENVVELKAYYY-------------SKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLD 422
+ H+ VV A + K + +Y ++ ++HSE +
Sbjct: 59 LNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEY 118
Query: 423 WDTXXXXXXXXXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLT-------- 474
W ++H ++K NIF++ + + D GL
Sbjct: 119 W-------RLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLD 171
Query: 475 --------------TITSALAPVIARAAGYRAPEVTD-SRKATQASDVYSFGVVLLEILT 519
+TSA+ A Y A EV D + + D+YS G++ E++
Sbjct: 172 ILKLDSQNLPGSSDNLTSAIG-----TAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY 226
Query: 520 GKSPIHTTGGDELVHLVRWVHSV 542
P T G E V++++ + SV
Sbjct: 227 ---PFST--GMERVNILKKLRSV 244
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 32.3 bits (72), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 23/37 (62%)
Query: 490 YRAPEVTDSRKATQASDVYSFGVVLLEILTGKSPIHT 526
Y APE+ + ++ D++S GV+L +L+G+ P +
Sbjct: 175 YAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQS 211
>pdb|3G39|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor
Length = 170
Score = 32.3 bits (72), Expect = 0.85, Method: Composition-based stats.
Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 5/85 (5%)
Query: 91 SALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLPD--FSVWKNLTIINLSDN 148
+ ++L L N IT P F L L L L N + LP F LT ++L+DN
Sbjct: 30 TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLT-VLPAGVFDKLTQLTQLSLNDN 88
Query: 149 GFNGTIPR-SLSNLTQLEALYLANN 172
+IPR + NL L ++L NN
Sbjct: 89 QLK-SIPRGAFDNLKSLTHIWLLNN 112
>pdb|3G3A|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|C Chain C, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|E Chain E, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|G Chain G, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
Length = 178
Score = 32.3 bits (72), Expect = 0.86, Method: Composition-based stats.
Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 5/85 (5%)
Query: 91 SALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLPD--FSVWKNLTIINLSDN 148
+ ++L L N IT P F L L L L N + LP F LT ++L+DN
Sbjct: 38 TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLT-VLPAGVFDKLTQLTQLSLNDN 96
Query: 149 GFNGTIPR-SLSNLTQLEALYLANN 172
+IPR + NL L ++L NN
Sbjct: 97 QLK-SIPRGAFDNLKSLTHIWLLNN 120
>pdb|3G3B|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|C Chain C, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|E Chain E, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|G Chain G, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
Length = 170
Score = 32.3 bits (72), Expect = 0.87, Method: Composition-based stats.
Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 5/85 (5%)
Query: 91 SALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLPD--FSVWKNLTIINLSDN 148
+ ++L L N IT P F L L L L N + LP F LT ++L+DN
Sbjct: 30 TTTQVLYLYDNRITKLEPGVFDRLTQLTRLDLDNNQLT-VLPAGVFDKLTQLTQLSLNDN 88
Query: 149 GFNGTIPR-SLSNLTQLEALYLANN 172
+IPR + NL L ++L NN
Sbjct: 89 QLK-SIPRGAFDNLRSLTHIWLLNN 112
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 32.3 bits (72), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 14/88 (15%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAP-----VIARAAGYRAPEVTD-SRKA 501
+VH ++K NI L+ +SD G + L P + GY APE+ S
Sbjct: 221 IVHRDLKPENILLDDNMQIRLSDFGFSC---HLEPGEKLRELCGTPGYLAPEILKCSMDE 277
Query: 502 TQAS-----DVYSFGVVLLEILTGKSPI 524
T D+++ GV+L +L G P
Sbjct: 278 THPGYGKEVDLWACGVILFTLLAGSPPF 305
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 80/215 (37%), Gaps = 28/215 (13%)
Query: 329 AEVLGKGTFGMAYKAIL-----EDGT-TVVVKRLKDVNVG--KRDFEQQMEIVGSI-RHE 379
+ LG G FG +A ED V VK LK K +++I+ + +HE
Sbjct: 51 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE 110
Query: 380 NVVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWD----------TXXXX 429
N+V L L++ +Y G +L+ R + R+ L+ D +
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGD---LLNFLRRKSRV-LETDPAFAIANSTLSTRDL 166
Query: 430 XXXXXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG 489
+H ++ + N+ L + + D GL + I +
Sbjct: 167 LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 226
Query: 490 -----YRAPEVTDSRKATQASDVYSFGVVLLEILT 519
+ APE T SDV+S+G++L EI +
Sbjct: 227 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 80/215 (37%), Gaps = 28/215 (13%)
Query: 329 AEVLGKGTFGMAYKAIL-----EDGT-TVVVKRLKDVNVG--KRDFEQQMEIVGSI-RHE 379
+ LG G FG +A ED V VK LK K +++I+ + +HE
Sbjct: 51 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE 110
Query: 380 NVVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWD----------TXXXX 429
N+V L L++ +Y G +L+ R + R+ L+ D +
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGD---LLNFLRRKSRV-LETDPAFAIANSTASTRDL 166
Query: 430 XXXXXXXXXXXXXXXXXKLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAAG 489
+H ++ + N+ L + + D GL + I +
Sbjct: 167 LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 226
Query: 490 -----YRAPEVTDSRKATQASDVYSFGVVLLEILT 519
+ APE T SDV+S+G++L EI +
Sbjct: 227 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 64/143 (44%), Gaps = 19/143 (13%)
Query: 448 LVHGNIKSSNIFLNS-QQYGCVS--DLGLTTITSALAPV--IARAAGYRAPEVTDSRKAT 502
+VH ++K NI L+S G + D G++ + I Y APE+ + T
Sbjct: 152 IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPIT 211
Query: 503 QASDVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNI 562
A+D+++ G++ +LT SP E + S V +++ E F ++
Sbjct: 212 TATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNI----SQVNVDYSEETFS-------SV 260
Query: 563 EEEMVEMLQIAMSCVVRMPDQRP 585
+ + +Q S +V+ P++RP
Sbjct: 261 SQLATDFIQ---SLLVKNPEKRP 280
>pdb|4FMZ|A Chain A, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
pdb|4FMZ|B Chain B, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
Length = 347
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 10/101 (9%)
Query: 78 FSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLPDFSVW 137
+ + P +RL++LKI +N IT P NL L +L + N S D +
Sbjct: 211 ITDITPVANXTRLNSLKI---GNNKITDLSP--LANLSQLTWLEIGTNQIS----DINAV 261
Query: 138 KNLTIINLSDNGFNGTIPRS-LSNLTQLEALYLANNSLSGK 177
K+LT + + G N S L+NL+QL +L+L NN L +
Sbjct: 262 KDLTKLKXLNVGSNQISDISVLNNLSQLNSLFLNNNQLGNE 302
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/86 (22%), Positives = 43/86 (50%), Gaps = 15/86 (17%)
Query: 506 DVYSFGVVLLEILTGKSPIHTTGGDELVHLVRWVHSVVREEWTAEVFDVELLRYPNIEEE 565
DV+S G +L + GK+P ++++ + +H+++ E +P+I E+
Sbjct: 221 DVWSLGCILYYMTYGKTPFQ-----QIINQISKLHAIIDPNHEIE--------FPDIPEK 267
Query: 566 MVEMLQIAMSCVVRMPDQRPKMPDVV 591
++ + C+ R P QR +P+++
Sbjct: 268 --DLQDVLKCCLKRDPKQRISIPELL 291
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 47/109 (43%), Gaps = 30/109 (27%)
Query: 67 RVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNN 126
++ ++L S + P ++ L+AL L L N + P NLK+L YL L FNN
Sbjct: 265 KLTELKLGANQISNISP---LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNN 319
Query: 127 FSGTLPDFSVWKNLTIINLSDNGFNGTIPRSLSNLTQLEALYLANNSLS 175
S P +S+LT+L+ L+ ANN +S
Sbjct: 320 ISDISP-------------------------VSSLTKLQRLFFANNKVS 343
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 107 FPSDFINLKSLCYLYLQFNNFS-GTLPD-FSVWKNLTIINLSDNGFNGTIPRSLSNLTQL 164
F F L SL L + N+F LPD F+ +NLT ++LS P + ++L+ L
Sbjct: 437 FNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSL 496
Query: 165 EALYLANNSLSGKIPD 180
+ L +A+N L +PD
Sbjct: 497 QVLNMASNQLKS-VPD 511
>pdb|2O6S|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
pdb|2O6S|B Chain B, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
Length = 208
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 49/126 (38%), Gaps = 20/126 (15%)
Query: 57 TGVKCSEDGKRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKS 116
T V+C G+ V +P + L L +N + F L S
Sbjct: 10 TTVECYSQGRTSVPTGIP----------------AQTTYLDLETNSLKSLPNGVFDELTS 53
Query: 117 LCYLYLQFNNFSGTLPD--FSVWKNLTIINLSDNGFNGTIPRSLSNLTQLEALYLANNSL 174
L LYL N +LP+ F+ +LT +NLS N LTQL+ L L N L
Sbjct: 54 LTQLYLGGNKLQ-SLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQL 112
Query: 175 SGKIPD 180
+PD
Sbjct: 113 Q-SLPD 117
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 46/106 (43%), Gaps = 5/106 (4%)
Query: 447 KLVHGNIKSSNIFLNSQQYGCVSDLGLTTITSALAPVIARAA---GYRAPEVT-DSRKAT 502
K++H ++K N+ +N + ++D GL S YR P++ S +
Sbjct: 120 KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYS 179
Query: 503 QASDVYSFGVVLLEILTGKSPIHTTGGDELVHLV-RWVHSVVREEW 547
D++ G + E+ TG+ + +E +H + R + + E W
Sbjct: 180 TQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETW 225
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 15/89 (16%)
Query: 447 KLVHGNIKSSNIFLNSQ-------QYG---CVS--DLGLTTITSALAPVIARAAGYRAPE 494
+++HG++K+ N+ L+S +G C+ LG + +T P + APE
Sbjct: 184 RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTET---HMAPE 240
Query: 495 VTDSRKATQASDVYSFGVVLLEILTGKSP 523
V + D++S ++L +L G P
Sbjct: 241 VVMGKPCDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R2.1 In Complex With Hen Egg Lysozyme
Length = 251
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 48/127 (37%), Gaps = 14/127 (11%)
Query: 52 VCNHWTGVKCSEDGKRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDF 111
C TG C+E K V IP +T + L L+S + + F
Sbjct: 3 TCETVTGCTCNEGKKEVDCQGKSLDSVPSGIPADT-------EKLDLQSTGLATLSDATF 55
Query: 112 INLKSLCYLYLQFNNF----SGTLPDFSVWKNLTIINLSDNGFNGTIPRSLSNLTQLEAL 167
L L +L L +N +G D + L + L++N +LTQL+ L
Sbjct: 56 RGLTKLTWLNLDYNQLQTLSAGVFDDLT---ELGTLGLANNQLASLPLGVFDHLTQLDKL 112
Query: 168 YLANNSL 174
YL N L
Sbjct: 113 YLGGNQL 119
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 15/89 (16%)
Query: 447 KLVHGNIKSSNIFLNSQ-------QYG---CVS--DLGLTTITSALAPVIARAAGYRAPE 494
+++HG++K+ N+ L+S +G C+ LG + +T P + APE
Sbjct: 170 RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTET---HMAPE 226
Query: 495 VTDSRKATQASDVYSFGVVLLEILTGKSP 523
V + D++S ++L +L G P
Sbjct: 227 VVMGKPCDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 15/89 (16%)
Query: 447 KLVHGNIKSSNIFLNSQ-------QYG---CVS--DLGLTTITSALAPVIARAAGYRAPE 494
+++HG++K+ N+ L+S +G C+ LG + +T P + APE
Sbjct: 186 RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTET---HMAPE 242
Query: 495 VTDSRKATQASDVYSFGVVLLEILTGKSP 523
V + D++S ++L +L G P
Sbjct: 243 VVMGKPCDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/87 (21%), Positives = 40/87 (45%), Gaps = 6/87 (6%)
Query: 448 LVHGNIKSSNIFLNSQQYGCVSDLGLT--TITSALAPVIARAAGYRAPEVT----DSRKA 501
++H ++K SN+ +N+ D G++ + + A Y APE + +
Sbjct: 158 VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKPYXAPERINPELNQKGY 217
Query: 502 TQASDVYSFGVVLLEILTGKSPIHTTG 528
+ SD++S G+ +E+ + P + G
Sbjct: 218 SVKSDIWSLGITXIELAILRFPYDSWG 244
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 78/200 (39%), Gaps = 18/200 (9%)
Query: 332 LGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKR-DFEQQMEIVG--SIRHENVVELKAYY 388
+G G FG+A ++ D + + +K + G++ D + EI+ S+RH N+V K
Sbjct: 27 IGSGNFGVA--RLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVI 84
Query: 389 YSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKL 448
+ +V +Y S G + + + GR D ++
Sbjct: 85 LTPTHLAIVMEYASGGELFERICN---AGRFSED-----EARFFFQQLISGVSYCHAMQV 136
Query: 449 VHGNIKSSNIFLNSQQYG----CVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKAT-Q 503
H ++K N L+ C +++ + Y APEV ++ +
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGK 196
Query: 504 ASDVYSFGVVLLEILTGKSP 523
+DV+S GV L +L G P
Sbjct: 197 VADVWSCGVTLYVMLVGAYP 216
>pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
pdb|3M19|B Chain B, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
Length = 251
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 48/127 (37%), Gaps = 14/127 (11%)
Query: 52 VCNHWTGVKCSEDGKRVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDF 111
C TG C+E K V IP +T + L L+S + + F
Sbjct: 3 TCETVTGCTCNEGKKEVDCQGKSLDSVPSGIPADT-------EKLDLQSTGLATLSDATF 55
Query: 112 INLKSLCYLYLQFNNF----SGTLPDFSVWKNLTIINLSDNGFNGTIPRSLSNLTQLEAL 167
L L +L L +N +G D + L + L++N +LTQL+ L
Sbjct: 56 RGLTKLTWLNLDYNQLQTLSAGVFDDLT---ELGTLGLANNQLASLPLGVFDHLTQLDKL 112
Query: 168 YLANNSL 174
YL N L
Sbjct: 113 YLGGNQL 119
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 78/200 (39%), Gaps = 18/200 (9%)
Query: 332 LGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKR-DFEQQMEIVG--SIRHENVVELKAYY 388
+G G FG+A ++ D T + +K + G D Q EI+ S+RH N+V K
Sbjct: 28 IGSGNFGVA--RLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVI 85
Query: 389 YSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKL 448
+ ++ +Y S G + + + GR D ++
Sbjct: 86 LTPTHLAIIMEYASGGELYERICN---AGRFSED-----EARFFFQQLLSGVSYCHSMQI 137
Query: 449 VHGNIKSSNIFLNSQQYG--CVSDLGL--TTITSALAPVIARAAGYRAPEVTDSRKAT-Q 503
H ++K N L+ + D G +++ + Y APEV ++ +
Sbjct: 138 CHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGK 197
Query: 504 ASDVYSFGVVLLEILTGKSP 523
+DV+S GV L +L G P
Sbjct: 198 IADVWSCGVTLYVMLVGAYP 217
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 67 RVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNN 126
++ ++L S + P ++ L+AL L L N + P NLK+L YL L FNN
Sbjct: 262 KLTELKLGANQISNISP---LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNN 316
Query: 127 FSGTLPDFSVWK 138
S P S+ K
Sbjct: 317 ISDISPVSSLTK 328
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 67 RVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNN 126
++ ++L S + P ++ L+AL L L N + P NLK+L YL L FNN
Sbjct: 262 KLTELKLGANQISNISP---LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNN 316
Query: 127 FSGTLPDFSVWK 138
S P S+ K
Sbjct: 317 ISDISPVSSLTK 328
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 67 RVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNN 126
++ ++L S + P ++ L+AL L L N + P NLK+L YL L FNN
Sbjct: 261 KLTELKLGANQISNISP---LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNN 315
Query: 127 FSGTLPDFSVWK 138
S P S+ K
Sbjct: 316 ISDISPVSSLTK 327
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 329 AEVLGKGTFGMAYKAI-LEDGTTVVVKR-LKDVNVGKRDFEQQMEIVGSIRHENVVELKA 386
+ LG G+FG+ + +E G +K+ L+D R +++I+ + H N+++L
Sbjct: 12 GKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNR----ELDIMKVLDHVNIIKLVD 67
Query: 387 YYYS 390
Y+Y+
Sbjct: 68 YFYT 71
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 78/200 (39%), Gaps = 18/200 (9%)
Query: 332 LGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKR-DFEQQMEIVG--SIRHENVVELKAYY 388
+G G FG+A ++ D + + +K + G++ D + EI+ S+RH N+V K
Sbjct: 27 IGSGNFGVA--RLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVI 84
Query: 389 YSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKL 448
+ +V +Y S G + + + GR D ++
Sbjct: 85 LTPTHLAIVMEYASGGELFERICN---AGRFSED-----EARFFFQQLISGVSYCHAMQV 136
Query: 449 VHGNIKSSNIFLNSQQYG----CVSDLGLTTITSALAPVIARAAGYRAPEVTDSRKAT-Q 503
H ++K N L+ C +++ + Y APEV ++ +
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLLKKEYDGK 196
Query: 504 ASDVYSFGVVLLEILTGKSP 523
+DV+S GV L +L G P
Sbjct: 197 VADVWSCGVTLYVMLVGAYP 216
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 67 RVVAVRLPGVGFSGLIPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNN 126
++ ++L S + P ++ L+AL L L N + P NLK+L YL L FNN
Sbjct: 266 KLTELKLGANQISNISP---LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNN 320
Query: 127 FSGTLPDFSVWK 138
S P S+ K
Sbjct: 321 ISDISPVSSLTK 332
>pdb|2O6R|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B61
Length = 177
Score = 30.0 bits (66), Expect = 4.4, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 35/87 (40%), Gaps = 4/87 (4%)
Query: 96 LSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLPD--FSVWKNLTIINLSDNGFNGT 153
L L SN + F L L L L N +LPD F LTI+ L +N
Sbjct: 33 LELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQ-SLPDGVFDKLTKLTILYLHENKLQSL 91
Query: 154 IPRSLSNLTQLEALYLANNSLSGKIPD 180
LTQL+ L L N L +PD
Sbjct: 92 PNGVFDKLTQLKELALDTNQLK-SVPD 117
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 80/200 (40%), Gaps = 18/200 (9%)
Query: 332 LGKGTFGMAYKAILEDGTTVVVKRLKDVNVGKR-DFEQQMEIVG--SIRHENVVELKAYY 388
+G G FG+A ++ D + + +K + G++ D + EI+ S+RH N+V K
Sbjct: 26 IGSGNFGVA--RLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVI 83
Query: 389 YSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXXXXXXXXXXXKL 448
+ +V +Y S G + + + GR D ++
Sbjct: 84 LTPTHLAIVMEYASGGELFERICN---AGRFSED-----EARFFFQQLISGVSYCHAMQV 135
Query: 449 VHGNIKSSNIFLNSQQYG--CVSDLGL--TTITSALAPVIARAAGYRAPEVTDSRKAT-Q 503
H ++K N L+ + D G +++ + Y APEV ++ +
Sbjct: 136 CHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGK 195
Query: 504 ASDVYSFGVVLLEILTGKSP 523
+DV+S GV L +L G P
Sbjct: 196 VADVWSCGVTLYVMLVGAYP 215
>pdb|1XKU|A Chain A, Crystal Structure Of The Dimeric Protein Core Of Decorin,
The Archetypal Small Leucine-Rich Repeat Proteoglycan
Length = 330
Score = 29.6 bits (65), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 133 DFSVWKNLTIINLSDNGFNGTIPRSLSNLTQLEALYLANNSL 174
DF KNL + L +N + P + + L +LE LYL+ N L
Sbjct: 71 DFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQL 112
>pdb|1XCD|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 1
pdb|1XEC|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
pdb|1XEC|B Chain B, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
Length = 329
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 133 DFSVWKNLTIINLSDNGFNGTIPRSLSNLTQLEALYLANNSL 174
DF KNL + L +N + P + + L +LE LYL+ N L
Sbjct: 71 DFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQL 112
>pdb|3ULU|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form1)
pdb|3ULV|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form2)
Length = 694
Score = 29.3 bits (64), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Query: 76 VGFSGL--IPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLPD 133
VGF+ + + P +L LK+L+L+ N ++ F +L L+L N+ +
Sbjct: 66 VGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNN 125
Query: 134 -FSVWKNLTIINLSDNGFNGT 153
F KNL ++LS NG + T
Sbjct: 126 PFVKQKNLITLDLSHNGLSST 146
>pdb|1ZIW|A Chain A, Human Toll-Like Receptor 3 Extracellular Domain Structure
Length = 680
Score = 29.3 bits (64), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Query: 76 VGFSGL--IPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLPD 133
VGF+ + + P +L LK+L+L+ N ++ F +L L+L N+ +
Sbjct: 56 VGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNN 115
Query: 134 -FSVWKNLTIINLSDNGFNGT 153
F KNL ++LS NG + T
Sbjct: 116 PFVKQKNLITLDLSHNGLSST 136
>pdb|2A0Z|A Chain A, The Molecular Structure Of Toll-like Receptor 3 Ligand
Binding Domain
Length = 705
Score = 29.3 bits (64), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Query: 76 VGFSGL--IPPNTISRLSALKILSLRSNVITGYFPSDFINLKSLCYLYLQFNNFSGTLPD 133
VGF+ + + P +L LK+L+L+ N ++ F +L L+L N+ +
Sbjct: 61 VGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNN 120
Query: 134 -FSVWKNLTIINLSDNGFNGT 153
F KNL ++LS NG + T
Sbjct: 121 PFVKQKNLITLDLSHNGLSST 141
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 28.9 bits (63), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 86/225 (38%), Gaps = 29/225 (12%)
Query: 321 LEDLLRASAEVLGKGTFGMAYKAI-LEDGTTVVVKRLKDV--NVGKRDFEQQMEIVGSIR 377
ED+ + +VLG+G I L VK ++ ++ R F + +
Sbjct: 10 FEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQG 69
Query: 378 HENVVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXX 437
H NV+EL ++ +D +V++ GS+ + +H R +
Sbjct: 70 HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNEL--------EASVVVQDVA 121
Query: 438 XXXXXXXXXKLVHGNIKSSNIFLN-----SQQYGCVSDLG--------LTTITSALAPVI 484
+ H ++K NI S C DLG + I++
Sbjct: 122 SALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTP 181
Query: 485 ARAAGYRAPEVTD--SRKAT---QASDVYSFGVVLLEILTGKSPI 524
+A Y APEV + S +A+ + D++S GV+L +L+G P
Sbjct: 182 CGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 28.9 bits (63), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 87/225 (38%), Gaps = 29/225 (12%)
Query: 321 LEDLLRASAEVLGKGTFGMAYKAI-LEDGTTVVVKRLKDV--NVGKRDFEQQMEIVGSIR 377
ED+ + +VLG+G I L VK ++ ++ R F + +
Sbjct: 10 FEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQG 69
Query: 378 HENVVELKAYYYSKDEKLMVYDYYSLGSVSAMLHSERGEGRIPLDWDTXXXXXXXXXXXX 437
H NV+EL ++ +D +V++ GS+ + +H R +
Sbjct: 70 HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNEL--------EASVVVQDVA 121
Query: 438 XXXXXXXXXKLVHGNIKSSNIFL---NSQQYGCVSDLGLTT---ITSALAPVI------- 484
+ H ++K NI N + D GL + + +P+
Sbjct: 122 SALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTP 181
Query: 485 ARAAGYRAPEVTD--SRKAT---QASDVYSFGVVLLEILTGKSPI 524
+A Y APEV + S +A+ + D++S GV+L +L+G P
Sbjct: 182 CGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,399,707
Number of Sequences: 62578
Number of extensions: 688750
Number of successful extensions: 3573
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 473
Number of HSP's successfully gapped in prelim test: 528
Number of HSP's that attempted gapping in prelim test: 2051
Number of HSP's gapped (non-prelim): 1406
length of query: 625
length of database: 14,973,337
effective HSP length: 105
effective length of query: 520
effective length of database: 8,402,647
effective search space: 4369376440
effective search space used: 4369376440
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)